Query 001902
Match_columns 998
No_of_seqs 676 out of 4588
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 03:54:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001902.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001902hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 100.0 1E-58 3.6E-63 511.7 26.1 278 664-970 31-310 (311)
2 3ubd_A Ribosomal protein S6 ki 100.0 3.5E-56 1.2E-60 491.5 22.2 276 662-969 21-302 (304)
3 4b9d_A Serine/threonine-protei 100.0 1.9E-55 6.6E-60 493.6 26.0 260 664-956 23-282 (350)
4 4fih_A Serine/threonine-protei 100.0 1.2E-54 4.3E-59 486.2 25.8 256 665-957 74-330 (346)
5 3hyh_A Carbon catabolite-derep 100.0 2.4E-54 8.3E-59 470.4 26.6 260 658-956 8-268 (275)
6 4fie_A Serine/threonine-protei 100.0 2.3E-53 8E-58 487.4 28.7 256 665-957 151-407 (423)
7 3fpq_A Serine/threonine-protei 100.0 1.6E-52 5.6E-57 459.9 27.1 255 665-956 25-288 (290)
8 4g3f_A NF-kappa-beta-inducing 100.0 1.1E-52 3.9E-57 469.0 20.7 262 664-957 57-329 (336)
9 3v5w_A G-protein coupled recep 100.0 1.3E-51 4.3E-56 492.9 28.4 283 656-971 180-472 (689)
10 4b99_A Mitogen-activated prote 100.0 2.2E-50 7.4E-55 463.6 29.2 266 665-961 54-355 (398)
11 4g31_A Eukaryotic translation 100.0 8.7E-51 3E-55 449.8 21.9 272 665-961 5-290 (299)
12 3omv_A RAF proto-oncogene seri 100.0 2.4E-49 8.3E-54 437.9 27.7 264 659-953 30-302 (307)
13 4f9c_A Cell division cycle 7-r 100.0 6.4E-49 2.2E-53 446.5 27.7 281 664-958 20-360 (361)
14 4asz_A BDNF/NT-3 growth factor 100.0 4.2E-49 1.4E-53 435.7 24.7 260 661-955 9-285 (299)
15 4aoj_A High affinity nerve gro 100.0 2E-48 6.7E-53 436.3 27.4 257 661-950 37-312 (329)
16 3uto_A Twitchin; kinase, muscl 100.0 1.3E-48 4.3E-53 470.3 26.9 262 664-961 156-421 (573)
17 4gt4_A Tyrosine-protein kinase 100.0 2.5E-48 8.4E-53 431.4 24.9 259 661-947 22-300 (308)
18 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-47 6.3E-52 434.7 26.3 282 658-970 16-302 (353)
19 1o6l_A RAC-beta serine/threoni 100.0 5.5E-47 1.9E-51 428.0 29.5 279 662-971 2-283 (337)
20 4ase_A Vascular endothelial gr 100.0 1.5E-47 5.3E-52 432.5 21.9 261 660-951 59-341 (353)
21 1fot_A TPK1 delta, CAMP-depend 100.0 1.4E-46 4.9E-51 421.3 28.5 275 662-970 3-280 (318)
22 2r5t_A Serine/threonine-protei 100.0 9.1E-47 3.1E-51 431.9 27.5 280 661-971 34-316 (373)
23 4dc2_A Protein kinase C IOTA t 100.0 2.2E-46 7.4E-51 431.3 30.1 280 661-971 48-341 (396)
24 3a8x_A Protein kinase C IOTA t 100.0 8.4E-46 2.9E-50 419.9 32.7 279 661-970 5-297 (345)
25 3v8s_A RHO-associated protein 100.0 1E-46 3.5E-51 436.3 24.7 278 661-971 65-352 (410)
26 2i0e_A Protein kinase C-beta I 100.0 2.5E-46 8.5E-51 425.2 26.5 280 661-971 16-299 (353)
27 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.3E-46 1.5E-50 423.0 28.0 275 662-970 38-315 (350)
28 1xjd_A Protein kinase C, theta 100.0 2.2E-46 7.5E-51 424.3 25.5 275 661-970 13-291 (345)
29 4aw2_A Serine/threonine-protei 100.0 2E-46 6.8E-51 437.2 25.5 281 661-972 70-360 (437)
30 2vd5_A DMPK protein; serine/th 100.0 3.3E-46 1.1E-50 432.3 23.0 282 661-971 57-348 (412)
31 4fr4_A YANK1, serine/threonine 100.0 4E-45 1.4E-49 419.3 30.2 281 656-971 6-294 (384)
32 3fe3_A MAP/microtubule affinit 100.0 7.5E-45 2.6E-49 409.2 30.6 262 661-959 11-273 (328)
33 3c4z_A Rhodopsin kinase; Ser/T 100.0 8.5E-45 2.9E-49 432.6 30.1 283 661-972 181-472 (543)
34 4ejn_A RAC-alpha serine/threon 100.0 3.9E-45 1.3E-49 429.4 25.5 280 660-970 143-426 (446)
35 2yab_A Death-associated protei 100.0 9.4E-45 3.2E-49 413.5 27.6 265 664-962 11-284 (361)
36 3a62_A Ribosomal protein S6 ki 100.0 1.9E-44 6.4E-49 406.0 28.7 279 661-970 13-298 (327)
37 2acx_A G protein-coupled recep 100.0 1.5E-44 5E-49 431.6 27.7 283 661-973 180-469 (576)
38 3pfq_A PKC-B, PKC-beta, protei 100.0 2E-44 7E-49 442.8 29.0 282 660-972 336-621 (674)
39 3zgw_A Maternal embryonic leuc 100.0 2.1E-44 7.1E-49 408.3 25.3 257 664-956 9-266 (347)
40 3fxz_A Serine/threonine-protei 100.0 1E-43 3.4E-48 394.4 28.7 257 664-957 19-276 (297)
41 2zv2_A Calcium/calmodulin-depe 100.0 6.8E-44 2.3E-48 395.5 24.9 264 659-956 7-298 (298)
42 2y0a_A Death-associated protei 100.0 1.6E-43 5.6E-48 398.1 28.2 264 665-962 11-283 (326)
43 3soa_A Calcium/calmodulin-depe 100.0 2.5E-43 8.7E-48 412.3 28.8 259 664-956 10-273 (444)
44 3gni_B Strad alpha; kinase fol 100.0 1.9E-43 6.3E-48 407.6 26.8 275 662-961 22-344 (389)
45 1tki_A Titin; serine kinase, m 100.0 1.4E-43 4.8E-48 397.7 24.8 257 664-957 4-264 (321)
46 2bdw_A Hypothetical protein K1 100.0 2.8E-43 9.5E-48 402.0 27.0 258 664-956 28-290 (362)
47 3hmm_A TGF-beta receptor type- 100.0 6E-44 2E-48 396.6 20.8 248 665-944 3-288 (303)
48 3o0g_A Cell division protein k 100.0 8E-43 2.7E-47 385.7 28.4 259 665-957 2-289 (292)
49 3niz_A Rhodanese family protei 100.0 5.8E-43 2E-47 390.9 26.6 265 661-960 17-310 (311)
50 3oz6_A Mitogen-activated prote 100.0 7.6E-43 2.6E-47 402.3 28.4 283 664-962 8-340 (388)
51 3fdn_A Serine/threonine-protei 100.0 2.7E-43 9.2E-48 386.7 22.5 261 661-958 5-265 (279)
52 3rp9_A Mitogen-activated prote 100.0 8.6E-43 2.9E-47 411.0 28.2 302 664-973 52-419 (458)
53 3uc3_A Serine/threonine-protei 100.0 1E-42 3.6E-47 397.1 27.9 257 662-956 17-280 (361)
54 3h4j_B AMPK kdaid, SNF1-like p 100.0 1E-43 3.6E-48 400.9 18.9 256 664-956 8-264 (336)
55 3tki_A Serine/threonine-protei 100.0 5.4E-43 1.9E-47 393.3 24.6 261 664-957 6-268 (323)
56 2eue_A Carbon catabolite derep 100.0 8.4E-43 2.9E-47 382.0 25.4 256 664-956 12-268 (275)
57 1kob_A Twitchin; kinase, intra 100.0 2.4E-42 8.1E-47 397.3 29.9 260 664-959 50-313 (387)
58 3kk8_A Calcium/calmodulin depe 100.0 2.9E-42 1E-46 379.2 29.2 265 664-963 5-274 (284)
59 3c0i_A Peripheral plasma membr 100.0 5.3E-43 1.8E-47 398.1 23.7 266 662-959 21-295 (351)
60 3g33_A Cell division protein k 100.0 1.6E-42 5.4E-47 386.4 26.8 263 662-957 6-303 (308)
61 2x4f_A Myosin light chain kina 100.0 7.7E-43 2.6E-47 399.9 24.8 260 666-961 88-353 (373)
62 2pmi_A Negative RE, cyclin-dep 100.0 8.4E-43 2.9E-47 390.6 24.4 265 664-962 4-305 (317)
63 2y94_A 5'-AMP-activated protei 100.0 9.4E-43 3.2E-47 410.3 25.4 261 660-956 11-272 (476)
64 2a2a_A Death-associated protei 100.0 1.8E-42 6.2E-47 388.5 26.5 265 664-962 11-284 (321)
65 2vgo_A Serine/threonine-protei 100.0 1.2E-42 4E-47 382.7 24.1 260 661-957 10-269 (284)
66 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.5E-43 2.9E-47 392.7 23.2 264 662-960 31-328 (329)
67 3llt_A Serine/threonine kinase 100.0 2.5E-42 8.6E-47 393.6 26.6 256 661-955 31-360 (360)
68 1u5q_A Serine/threonine protei 100.0 3.7E-42 1.3E-46 390.6 27.2 256 665-957 54-312 (348)
69 1nxk_A MAP kinase-activated pr 100.0 1.4E-42 4.8E-47 401.5 24.0 254 664-957 60-328 (400)
70 1ob3_A PFPK5, cell division co 100.0 1.5E-42 5.2E-47 382.8 23.2 258 665-957 2-287 (288)
71 2w4o_A Calcium/calmodulin-depe 100.0 3.6E-42 1.2E-46 390.9 26.9 258 662-958 50-313 (349)
72 2qr7_A Ribosomal protein S6 ki 100.0 5.4E-43 1.8E-47 396.4 19.8 257 664-962 21-287 (342)
73 3ttj_A Mitogen-activated prote 100.0 2.2E-42 7.5E-47 407.3 25.6 256 664-957 61-362 (464)
74 4agu_A Cyclin-dependent kinase 100.0 3.4E-42 1.2E-46 384.0 25.7 264 664-961 2-295 (311)
75 3lm5_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 386.5 26.4 266 665-963 28-300 (327)
76 1vzo_A Ribosomal protein S6 ki 100.0 3E-42 1E-46 392.5 25.0 285 661-975 50-346 (355)
77 3hko_A Calcium/calmodulin-depe 100.0 1.8E-42 6.1E-47 392.1 21.6 270 664-960 25-340 (345)
78 3n9x_A Phosphotransferase; mal 100.0 1.3E-41 4.5E-46 397.6 29.6 296 664-973 25-384 (432)
79 2c30_A Serine/threonine-protei 100.0 9.6E-42 3.3E-46 382.8 27.3 256 666-958 46-302 (321)
80 2ac3_A MAP kinase-interacting 100.0 7E-42 2.4E-46 382.4 25.0 268 664-960 11-305 (316)
81 2y7j_A Phosphorylase B kinase 100.0 5.3E-42 1.8E-46 392.0 24.5 258 665-956 94-365 (365)
82 3nyv_A Calmodulin-domain prote 100.0 1.5E-42 5E-47 411.9 20.6 263 662-959 23-290 (484)
83 3cok_A Serine/threonine-protei 100.0 2.8E-42 9.7E-47 378.2 21.3 260 664-957 10-269 (278)
84 1cm8_A Phosphorylated MAP kina 100.0 8.1E-42 2.8E-46 390.7 25.9 260 664-962 24-319 (367)
85 3mtl_A Cell division protein k 100.0 1.8E-42 6.3E-47 389.1 19.9 263 665-962 2-293 (324)
86 1phk_A Phosphorylase kinase; g 100.0 2E-41 7E-46 375.1 27.8 267 664-964 16-297 (298)
87 3is5_A Calcium-dependent prote 100.0 1.2E-41 4.1E-46 375.2 25.5 257 665-956 22-284 (285)
88 3f3z_A Calcium/calmodulin-depe 100.0 7E-42 2.4E-46 374.9 23.0 254 665-956 9-267 (277)
89 2owb_A Serine/threonine-protei 100.0 1.6E-41 5.5E-46 383.3 26.6 260 663-957 39-298 (335)
90 2rku_A Serine/threonine-protei 100.0 2.2E-41 7.6E-46 374.4 27.1 260 663-957 13-272 (294)
91 2xrw_A Mitogen-activated prote 100.0 1.3E-41 4.4E-46 389.7 25.5 271 664-972 24-340 (371)
92 3kn6_A Ribosomal protein S6 ki 100.0 4.9E-42 1.7E-46 385.9 21.6 253 666-957 9-277 (325)
93 3dls_A PAS domain-containing s 100.0 5.7E-42 2E-46 387.0 21.8 266 664-971 23-301 (335)
94 3eqc_A Dual specificity mitoge 100.0 5.8E-42 2E-46 390.7 22.1 265 661-962 29-336 (360)
95 2h6d_A 5'-AMP-activated protei 100.0 1.3E-41 4.4E-46 372.4 23.6 261 660-956 6-267 (276)
96 3lij_A Calcium/calmodulin depe 100.0 1.3E-41 4.5E-46 404.6 25.4 258 665-958 37-299 (494)
97 2pml_X PFPK7, Ser/Thr protein 100.0 9.6E-42 3.3E-46 386.6 23.0 268 661-963 27-335 (348)
98 3mwu_A Calmodulin-domain prote 100.0 9.7E-42 3.3E-46 405.0 24.0 257 665-957 22-283 (486)
99 3bhy_A Death-associated protei 100.0 8.6E-42 2.9E-46 375.2 21.7 265 664-962 4-277 (283)
100 3q5i_A Protein kinase; CDPK, m 100.0 1.7E-41 5.9E-46 404.6 26.1 259 664-957 35-308 (504)
101 2r3i_A Cell division protein k 100.0 2.4E-41 8.1E-46 374.8 25.4 263 664-959 2-292 (299)
102 2x7f_A TRAF2 and NCK-interacti 100.0 3.2E-41 1.1E-45 378.7 26.5 264 662-960 21-296 (326)
103 1ua2_A CAK, cell division prot 100.0 1.3E-41 4.6E-46 385.7 23.6 266 664-962 9-303 (346)
104 2fst_X Mitogen-activated prote 100.0 1.6E-41 5.4E-46 388.1 24.2 260 664-962 28-323 (367)
105 2jam_A Calcium/calmodulin-depe 100.0 2.1E-41 7.2E-46 376.6 24.1 255 665-957 9-268 (304)
106 2yex_A Serine/threonine-protei 100.0 3.1E-41 1.1E-45 369.1 25.0 260 665-957 7-268 (276)
107 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-41 5.8E-46 379.0 23.3 254 664-956 56-310 (311)
108 4eqm_A Protein kinase; transfe 100.0 5.3E-41 1.8E-45 371.9 26.9 253 662-942 8-263 (294)
109 3eb0_A Putative uncharacterize 100.0 3.9E-41 1.3E-45 387.4 26.5 258 662-959 4-330 (383)
110 1t4h_A Serine/threonine-protei 100.0 6.3E-41 2.1E-45 370.0 27.0 257 663-956 24-288 (290)
111 3mi9_A Cell division protein k 100.0 5.5E-41 1.9E-45 381.2 27.2 265 664-958 16-319 (351)
112 2wtk_C Serine/threonine-protei 100.0 3.7E-41 1.3E-45 374.3 25.1 266 664-961 4-274 (305)
113 3kvw_A DYRK2, dual specificity 100.0 4E-41 1.4E-45 393.0 26.5 256 663-957 95-415 (429)
114 3ork_A Serine/threonine protei 100.0 4.4E-42 1.5E-46 383.6 17.5 263 664-956 11-279 (311)
115 4aaa_A Cyclin-dependent kinase 100.0 1.4E-41 4.8E-46 383.0 21.5 265 663-961 23-317 (331)
116 3nsz_A CK II alpha, casein kin 100.0 1.4E-40 4.8E-45 374.2 29.7 255 663-960 34-329 (330)
117 3dbq_A Dual specificity protei 100.0 5E-41 1.7E-45 380.6 26.1 260 662-956 6-279 (343)
118 2j7t_A Serine/threonine-protei 100.0 4E-41 1.4E-45 373.5 23.8 263 664-961 18-286 (302)
119 3qd2_B Eukaryotic translation 100.0 2.1E-41 7.2E-46 380.4 21.8 270 664-957 5-332 (332)
120 4exu_A Mitogen-activated prote 100.0 6.4E-41 2.2E-45 383.9 26.2 260 664-963 41-336 (371)
121 3fme_A Dual specificity mitoge 100.0 3.7E-41 1.3E-45 371.3 23.2 262 661-956 3-272 (290)
122 3qyz_A Mitogen-activated prote 100.0 9.7E-41 3.3E-45 381.3 27.0 260 664-957 26-320 (364)
123 3i6u_A CDS1, serine/threonine- 100.0 2.2E-41 7.5E-46 394.1 21.1 263 664-961 134-410 (419)
124 2zmd_A Dual specificity protei 100.0 9.3E-41 3.2E-45 385.0 25.9 262 662-958 53-328 (390)
125 2vwi_A Serine/threonine-protei 100.0 2.7E-41 9.1E-46 374.7 20.5 274 660-961 10-298 (303)
126 1j1b_A Glycogen synthase kinas 100.0 6.8E-41 2.3E-45 390.0 24.5 259 664-962 53-348 (420)
127 2b9h_A MAP kinase FUS3, mitoge 100.0 1.9E-40 6.4E-45 376.8 27.1 272 664-962 10-317 (353)
128 3p86_A Serine/threonine-protei 100.0 2E-40 6.9E-45 370.0 26.1 257 660-950 32-291 (309)
129 3coi_A Mitogen-activated prote 100.0 2.9E-40 9.8E-45 375.7 27.9 259 664-962 23-317 (353)
130 1blx_A Cyclin-dependent kinase 100.0 1.8E-40 6.3E-45 372.4 25.8 264 663-960 9-306 (326)
131 3e3p_A Protein kinase, putativ 100.0 1.2E-40 4E-45 379.5 24.4 263 663-962 21-326 (360)
132 3an0_A Dual specificity mitoge 100.0 9.4E-41 3.2E-45 377.5 23.2 262 660-956 46-316 (340)
133 3com_A Serine/threonine-protei 100.0 2.5E-40 8.4E-45 369.5 26.0 261 663-960 27-288 (314)
134 1x8b_A WEE1HU, WEE1-like prote 100.0 2E-40 7E-45 364.3 24.7 254 664-957 10-286 (289)
135 1z57_A Dual specificity protei 100.0 1.5E-40 5E-45 374.5 24.0 258 662-958 11-336 (339)
136 4e7w_A Glycogen synthase kinas 100.0 2.3E-40 7.7E-45 382.4 26.2 260 664-963 39-334 (394)
137 2i6l_A Mitogen-activated prote 100.0 2.5E-40 8.5E-45 369.7 25.6 264 664-962 10-317 (320)
138 3rgf_A Cyclin-dependent kinase 100.0 1.5E-40 5.1E-45 385.4 24.2 266 665-964 20-347 (405)
139 3kul_A Ephrin type-A receptor 100.0 2.2E-40 7.7E-45 372.3 24.7 257 660-944 44-304 (325)
140 3a7i_A MST3 kinase, serine/thr 100.0 4.7E-40 1.6E-44 365.4 27.0 256 664-956 21-276 (303)
141 3pg1_A Mitogen-activated prote 100.0 2.6E-40 8.8E-45 377.3 24.9 259 664-957 21-323 (362)
142 2psq_A Fibroblast growth facto 100.0 5.6E-40 1.9E-44 375.9 27.7 258 661-950 77-357 (370)
143 2wei_A Calmodulin-domain prote 100.0 1.3E-40 4.6E-45 366.9 21.6 260 664-959 21-285 (287)
144 1wak_A Serine/threonine-protei 100.0 1.1E-40 3.8E-45 384.4 21.8 254 664-956 36-397 (397)
145 3q60_A ROP5B; pseudokinase, tr 100.0 8.1E-42 2.8E-46 391.3 12.1 262 665-962 62-364 (371)
146 3byv_A Rhoptry kinase; malaria 100.0 5.5E-42 1.9E-46 393.6 10.5 253 664-958 72-367 (377)
147 2ycf_A Serine/threonine-protei 100.0 1.1E-40 3.6E-45 374.2 20.3 261 665-960 10-284 (322)
148 2w5a_A Serine/threonine-protei 100.0 2.5E-40 8.4E-45 362.8 22.2 260 664-956 5-273 (279)
149 2eu9_A Dual specificity protei 100.0 3.5E-40 1.2E-44 374.1 24.0 261 663-962 17-345 (355)
150 3qup_A Tyrosine-protein kinase 100.0 2.4E-40 8.2E-45 371.2 22.2 275 661-962 19-310 (323)
151 3l9p_A Anaplastic lymphoma kin 100.0 2.5E-40 8.7E-45 378.3 22.5 271 660-962 66-350 (367)
152 4hcu_A Tyrosine-protein kinase 100.0 6.8E-40 2.3E-44 357.6 24.8 255 660-951 5-260 (269)
153 2vx3_A Dual specificity tyrosi 100.0 3.4E-40 1.2E-44 379.4 23.1 256 664-958 53-380 (382)
154 3vhe_A Vascular endothelial gr 100.0 2.3E-40 7.8E-45 377.0 21.2 261 660-951 17-349 (359)
155 2izr_A Casein kinase I isoform 100.0 1.5E-39 5.3E-44 366.1 26.8 273 661-961 5-295 (330)
156 4euu_A Serine/threonine-protei 100.0 6.7E-40 2.3E-44 367.2 23.3 257 662-952 6-304 (319)
157 2clq_A Mitogen-activated prote 100.0 1.8E-39 6.3E-44 358.7 26.5 263 662-958 19-286 (295)
158 1q8y_A SR protein kinase; tran 100.0 4.7E-40 1.6E-44 376.2 21.3 260 659-957 13-340 (373)
159 3dtc_A Mitogen-activated prote 100.0 1.4E-39 4.6E-44 355.3 23.9 252 662-951 4-267 (271)
160 1rjb_A FL cytokine receptor; k 100.0 8.5E-40 2.9E-44 370.1 22.7 262 659-951 39-328 (344)
161 2ivs_A Proto-oncogene tyrosine 100.0 1.4E-39 4.9E-44 362.9 23.6 263 657-951 15-305 (314)
162 3fhr_A MAP kinase-activated pr 100.0 5.7E-40 1.9E-44 370.8 20.4 254 663-956 26-293 (336)
163 1zy4_A Serine/threonine-protei 100.0 2.3E-39 7.9E-44 358.7 24.9 272 665-961 6-294 (303)
164 3gen_A Tyrosine-protein kinase 100.0 2.7E-39 9.4E-44 355.4 25.3 256 659-951 18-274 (283)
165 3kfa_A Tyrosine-protein kinase 100.0 2.2E-39 7.7E-44 356.9 24.4 254 659-943 7-261 (288)
166 1t46_A HOMO sapiens V-KIT hard 100.0 1.6E-39 5.5E-44 362.3 23.2 261 660-951 18-301 (313)
167 3kmu_A ILK, integrin-linked ki 100.0 2E-39 6.7E-44 353.4 23.3 252 660-950 5-263 (271)
168 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.1E-39 7.3E-44 353.3 23.5 254 661-951 4-258 (268)
169 3s95_A LIMK-1, LIM domain kina 100.0 9.1E-40 3.1E-44 364.4 21.0 264 662-950 7-275 (310)
170 1p4o_A Insulin-like growth fac 100.0 1E-39 3.5E-44 365.8 21.3 276 659-962 19-310 (322)
171 3tt0_A Basic fibroblast growth 100.0 5.9E-39 2E-43 369.1 27.9 260 660-951 64-346 (382)
172 1csn_A Casein kinase-1; phosph 100.0 1.9E-39 6.6E-44 359.1 22.8 274 661-961 6-297 (298)
173 1luf_A Muscle-specific tyrosin 100.0 2.8E-39 9.7E-44 365.4 24.5 258 661-950 43-328 (343)
174 2h34_A Serine/threonine-protei 100.0 3.7E-39 1.3E-43 359.6 25.0 249 663-940 32-283 (309)
175 3lb7_A RAF proto-oncogene seri 100.0 2.8E-39 9.6E-44 360.4 23.9 261 658-953 29-296 (307)
176 4f0f_A Serine/threonine-protei 100.0 8.7E-39 3E-43 352.2 27.5 253 661-950 15-282 (287)
177 3ugc_A Tyrosine-protein kinase 100.0 2.4E-39 8.3E-44 358.2 22.8 257 660-944 5-282 (295)
178 3a99_A Proto-oncogene serine/t 100.0 1.4E-39 4.6E-44 365.1 20.7 256 662-960 40-303 (320)
179 3kex_A Receptor tyrosine-prote 100.0 1.1E-39 3.9E-44 366.5 19.7 257 660-946 8-269 (325)
180 2wqm_A Serine/threonine-protei 100.0 1E-38 3.6E-43 355.8 27.1 258 663-951 30-291 (310)
181 3cek_A Dual specificity protei 100.0 6.8E-39 2.3E-43 357.9 25.1 263 660-957 23-299 (313)
182 1mp8_A Focal adhesion kinase 1 100.0 5.9E-39 2E-43 352.7 24.1 256 660-950 10-269 (281)
183 3cbl_A C-FES, proto-oncogene t 100.0 1.8E-39 6E-44 372.8 20.2 257 660-945 109-366 (377)
184 2yfx_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 362.7 21.7 266 660-957 25-304 (327)
185 4fvq_A Tyrosine-protein kinase 100.0 3.4E-39 1.2E-43 355.6 21.2 249 661-951 4-269 (289)
186 2qol_A Ephrin receptor; recept 100.0 5.2E-39 1.8E-43 368.2 23.4 261 658-946 38-302 (373)
187 2i1m_A Macrophage colony-stimu 100.0 3.3E-39 1.1E-43 363.6 21.4 260 660-950 41-319 (333)
188 3poz_A Epidermal growth factor 100.0 4.3E-39 1.5E-43 362.1 22.1 257 661-951 11-272 (327)
189 2dyl_A Dual specificity mitoge 100.0 9E-39 3.1E-43 357.1 24.5 262 661-957 21-290 (318)
190 2iwi_A Serine/threonine-protei 100.0 2E-39 7E-44 361.8 18.6 254 662-958 28-291 (312)
191 3t9t_A Tyrosine-protein kinase 100.0 1E-38 3.5E-43 347.4 23.6 254 661-951 4-258 (267)
192 3aln_A Dual specificity mitoge 100.0 3.3E-39 1.1E-43 362.8 20.0 266 660-960 17-295 (327)
193 1opk_A P150, C-ABL, proto-onco 100.0 8.5E-39 2.9E-43 380.1 24.5 255 659-944 214-469 (495)
194 2xir_A Vascular endothelial gr 100.0 4.8E-39 1.7E-43 359.0 20.6 260 661-951 23-304 (316)
195 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-38 5.3E-43 373.5 25.8 252 656-945 184-437 (450)
196 2pvf_A Fibroblast growth facto 100.0 1.8E-38 6.1E-43 358.1 25.1 260 660-951 30-312 (334)
197 1qcf_A Haematopoetic cell kina 100.0 1.4E-38 4.7E-43 374.5 25.0 254 659-945 182-436 (454)
198 1u46_A ACK-1, activated CDC42 100.0 9E-39 3.1E-43 352.4 21.5 260 661-950 14-277 (291)
199 1u59_A Tyrosine-protein kinase 100.0 4.2E-38 1.4E-42 347.0 26.8 257 662-951 6-266 (287)
200 1fvr_A Tyrosine-protein kinase 100.0 1.2E-38 4.1E-43 358.3 22.9 255 662-951 22-294 (327)
201 3og7_A AKAP9-BRAF fusion prote 100.0 1.8E-38 6.3E-43 350.3 23.7 256 658-944 17-279 (289)
202 3lzb_A Epidermal growth factor 100.0 1.5E-38 5E-43 357.8 22.6 254 661-944 11-269 (327)
203 4e5w_A Tyrosine-protein kinase 100.0 2.1E-38 7.3E-43 351.5 23.5 255 662-943 18-292 (302)
204 1qpc_A LCK kinase; alpha beta 100.0 2.1E-38 7.2E-43 347.6 23.2 253 658-943 6-259 (279)
205 3op5_A Serine/threonine-protei 100.0 5E-39 1.7E-43 367.2 18.7 277 663-962 33-344 (364)
206 3lxl_A Tyrosine-protein kinase 100.0 1.3E-38 4.4E-43 358.1 21.5 271 660-959 18-308 (327)
207 3cc6_A Protein tyrosine kinase 100.0 3E-38 1E-42 346.9 23.7 256 661-951 8-267 (281)
208 1mqb_A Ephrin type-A receptor 100.0 5.5E-38 1.9E-42 354.1 26.5 258 659-944 38-300 (333)
209 2qkw_B Protein kinase; three-h 100.0 7E-39 2.4E-43 359.2 18.7 256 663-951 37-309 (321)
210 1byg_A CSK, protein (C-termina 100.0 1.2E-38 4.2E-43 349.4 20.1 252 655-944 11-264 (278)
211 1xbb_A Tyrosine-protein kinase 100.0 4.8E-38 1.6E-42 347.2 24.3 255 661-944 12-270 (291)
212 3soc_A Activin receptor type-2 100.0 1.4E-38 4.8E-43 357.2 20.2 252 661-946 20-311 (322)
213 2a19_B Interferon-induced, dou 100.0 2.6E-38 8.7E-43 347.3 21.7 248 664-956 10-273 (284)
214 3brb_A Proto-oncogene tyrosine 100.0 6.3E-38 2.2E-42 349.9 24.9 260 661-951 30-302 (313)
215 4hgt_A Casein kinase I isoform 100.0 6.4E-38 2.2E-42 346.3 24.0 272 664-962 8-295 (296)
216 3pls_A Macrophage-stimulating 100.0 1.2E-37 4.1E-42 344.6 25.5 252 666-944 22-278 (298)
217 3sv0_A Casein kinase I-like; t 100.0 9.4E-38 3.2E-42 368.3 25.9 276 663-965 5-296 (483)
218 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.6E-38 1.9E-42 369.0 23.3 252 659-943 178-430 (452)
219 2buj_A Serine/threonine-protei 100.0 1.4E-38 4.7E-43 355.8 16.7 265 662-951 26-300 (317)
220 3uim_A Brassinosteroid insensi 100.0 5.9E-39 2E-43 360.4 13.6 259 661-952 26-306 (326)
221 2eva_A TAK1 kinase - TAB1 chim 100.0 2.3E-37 7.8E-42 344.9 26.2 245 662-950 5-256 (307)
222 2jii_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 358.1 19.9 252 664-944 41-327 (352)
223 3p23_A Serine/threonine-protei 100.0 2.5E-38 8.7E-43 369.2 18.8 262 662-960 21-293 (432)
224 2rio_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 363.4 25.0 257 664-957 14-302 (434)
225 3q4u_A Activin receptor type-1 100.0 1.2E-37 4.2E-42 345.1 22.2 251 662-950 5-295 (301)
226 3f66_A Hepatocyte growth facto 100.0 2.3E-37 7.8E-42 342.7 24.4 254 664-944 24-282 (298)
227 2v62_A Serine/threonine-protei 100.0 4.7E-38 1.6E-42 356.4 19.2 259 662-943 34-318 (345)
228 3m2w_A MAP kinase-activated pr 100.0 8.3E-38 2.9E-42 346.9 20.7 233 664-957 16-263 (299)
229 3lxp_A Non-receptor tyrosine-p 100.0 1.2E-37 4.1E-42 348.8 22.0 255 662-949 28-302 (318)
230 3ll6_A Cyclin G-associated kin 100.0 8.7E-38 3E-42 351.7 20.7 264 661-951 24-302 (337)
231 4eut_A Serine/threonine-protei 100.0 8.5E-38 2.9E-42 361.2 21.1 252 663-944 7-300 (396)
232 3uzp_A CKI-delta, CKID, casein 100.0 2.4E-37 8.2E-42 341.9 23.4 254 664-944 8-271 (296)
233 2ozo_A Tyrosine-protein kinase 100.0 3.7E-37 1.3E-41 374.8 26.7 253 663-944 333-589 (613)
234 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-37 3.8E-42 356.1 20.1 250 661-947 61-332 (365)
235 2h8h_A Proto-oncogene tyrosine 100.0 1.8E-37 6.3E-42 372.0 22.5 252 659-943 261-513 (535)
236 3c1x_A Hepatocyte growth facto 100.0 1.5E-37 5.2E-42 355.9 20.5 252 666-944 90-346 (373)
237 2w1i_A JAK2; chromosomal rearr 100.0 3.8E-37 1.3E-41 346.0 22.8 256 660-943 36-312 (326)
238 2y4i_B KSR2, HKSR2, kinase sup 100.0 1.3E-37 4.4E-42 348.1 18.4 261 658-950 26-295 (319)
239 4fl3_A Tyrosine-protein kinase 100.0 7.1E-37 2.4E-41 373.3 25.3 246 671-945 375-623 (635)
240 2nru_A Interleukin-1 receptor- 100.0 4.5E-37 1.5E-41 341.9 19.4 253 666-950 32-299 (307)
241 3g2f_A Bone morphogenetic prot 100.0 8.8E-37 3E-41 344.1 20.7 267 660-956 8-323 (336)
242 3qa8_A MGC80376 protein; kinas 100.0 1.2E-37 4E-42 375.6 14.2 261 664-958 13-305 (676)
243 3mdy_A Bone morphogenetic prot 100.0 2.2E-36 7.6E-41 340.6 23.3 250 664-951 36-325 (337)
244 2vuw_A Serine/threonine-protei 100.0 4.3E-38 1.5E-42 355.2 8.2 247 662-955 17-336 (336)
245 3dzo_A Rhoptry kinase domain; 100.0 1.7E-37 5.8E-42 360.5 12.6 254 664-959 77-372 (413)
246 2j0j_A Focal adhesion kinase 1 100.0 9.6E-36 3.3E-40 364.7 27.4 252 661-943 386-641 (656)
247 3uqc_A Probable conserved tran 100.0 2.4E-36 8.3E-41 333.1 19.0 232 656-946 22-258 (286)
248 1b6c_B TGF-B superfamily recep 100.0 3.9E-36 1.3E-40 339.5 20.4 250 664-951 41-330 (342)
249 3gxj_A TGF-beta receptor type- 100.0 1.1E-37 3.9E-42 345.5 3.2 246 665-944 3-288 (303)
250 2pzi_A Probable serine/threoni 100.0 1.4E-35 4.7E-40 366.3 13.5 243 662-956 77-326 (681)
251 3ewk_A Sensor protein; PAS dom 100.0 1.1E-30 3.8E-35 277.3 30.1 217 201-581 1-227 (227)
252 4azs_A Methyltransferase WBDD; 100.0 1.1E-28 3.6E-33 296.9 11.5 190 671-893 240-437 (569)
253 3en9_A Glycoprotease, O-sialog 99.9 2.1E-24 7.3E-29 258.1 9.8 194 668-895 339-539 (540)
254 1zar_A RIO2 kinase; serine kin 99.9 1.4E-22 4.9E-27 222.3 10.9 134 666-814 91-239 (282)
255 4f3l_A Mclock, circadian locom 99.8 3.6E-19 1.2E-23 202.1 13.0 103 482-587 251-358 (361)
256 4f3l_B BMAL1B; BHLH, PAS, circ 99.8 4.7E-19 1.6E-23 202.8 12.1 105 480-587 276-386 (387)
257 2gj3_A Nitrogen fixation regul 99.8 3.8E-18 1.3E-22 160.7 16.0 119 186-307 2-120 (120)
258 1zth_A RIO1 serine protein kin 99.8 1.1E-18 3.8E-23 188.8 10.0 139 667-816 49-218 (258)
259 2pr5_A Blue-light photorecepto 99.7 1E-17 3.5E-22 160.6 14.5 126 475-606 2-129 (132)
260 2pr5_A Blue-light photorecepto 99.7 7.8E-18 2.7E-22 161.4 13.0 122 192-315 2-123 (132)
261 1n9l_A PHOT-LOV1, putative blu 99.7 3.6E-17 1.2E-21 151.7 15.6 109 197-305 1-109 (109)
262 4hia_A LOV protein; PAS, HTH, 99.7 3.3E-17 1.1E-21 164.9 16.3 142 186-336 4-145 (176)
263 2gj3_A Nitrogen fixation regul 99.7 3.1E-17 1.1E-21 154.4 14.6 110 474-586 7-120 (120)
264 3ue6_A Aureochrome1; PAS/LOV d 99.7 9.7E-17 3.3E-21 159.0 16.3 140 175-314 21-160 (166)
265 3rty_A Period circadian protei 99.7 1.3E-16 4.5E-21 177.9 17.5 103 482-587 154-266 (339)
266 3p7n_A Sensor histidine kinase 99.7 1.9E-16 6.7E-21 170.6 16.0 136 174-309 48-183 (258)
267 1n9l_A PHOT-LOV1, putative blu 99.7 3.5E-16 1.2E-20 144.9 14.9 104 481-584 2-109 (109)
268 3ewk_A Sensor protein; PAS dom 99.7 1.4E-16 4.7E-21 168.5 13.6 155 134-302 67-227 (227)
269 3mr0_A Sensory box histidine k 99.7 2.1E-16 7.3E-21 153.7 12.4 132 182-316 2-135 (142)
270 4hia_A LOV protein; PAS, HTH, 99.7 1.4E-15 4.9E-20 152.9 16.6 113 474-589 9-128 (176)
271 3t50_A Blue-light-activated hi 99.7 8.8E-16 3E-20 145.0 14.0 122 194-315 2-123 (128)
272 1d06_A Nitrogen fixation regul 99.6 7.8E-16 2.7E-20 146.9 13.2 122 459-583 2-130 (130)
273 3f1p_B ARYL hydrocarbon recept 99.6 2.9E-16 9.8E-21 147.7 10.1 116 190-308 3-120 (121)
274 3f1p_B ARYL hydrocarbon recept 99.6 5.4E-16 1.8E-20 145.8 11.6 110 475-587 5-120 (121)
275 1d06_A Nitrogen fixation regul 99.6 5.5E-16 1.9E-20 148.0 10.0 125 175-304 2-130 (130)
276 3p7n_A Sensor histidine kinase 99.6 3.2E-15 1.1E-19 161.1 16.5 112 473-587 64-182 (258)
277 4gyi_A RIO2 kinase; protein ki 99.6 5.3E-16 1.8E-20 174.8 10.5 139 667-816 97-264 (397)
278 3sw1_A Sensory box protein; li 99.6 5.2E-15 1.8E-19 145.9 16.0 131 186-319 22-155 (162)
279 2r78_A Sensor protein; sensory 99.6 5.5E-15 1.9E-19 138.6 15.3 105 474-583 13-117 (117)
280 3mqq_A Transcriptional regulat 99.6 1.3E-15 4.5E-20 142.9 10.8 111 473-587 4-118 (120)
281 2r78_A Sensor protein; sensory 99.6 4.8E-15 1.7E-19 139.0 14.6 114 182-304 4-117 (117)
282 2vv6_A FIXL, sensor protein FI 99.6 1.6E-15 5.4E-20 142.3 10.8 105 480-587 1-111 (119)
283 3f1p_A Endothelial PAS domain- 99.6 1.4E-15 4.9E-20 141.8 9.9 105 480-587 7-116 (117)
284 3mqq_A Transcriptional regulat 99.6 1.4E-15 4.8E-20 142.7 9.6 115 190-309 4-119 (120)
285 3f1p_A Endothelial PAS domain- 99.6 1.1E-15 3.7E-20 142.6 8.6 108 198-308 8-116 (117)
286 2z6d_A Phototropin-2; PAS-fold 99.6 1.6E-14 5.6E-19 134.1 16.1 127 186-312 3-129 (130)
287 3nja_A Probable ggdef family p 99.6 3.5E-15 1.2E-19 139.2 11.4 123 183-308 1-125 (125)
288 3ue6_A Aureochrome1; PAS/LOV d 99.6 4.5E-15 1.6E-19 146.9 12.5 123 462-587 24-154 (166)
289 4eet_B Phototropin-2; LOV, blu 99.6 1.9E-14 6.5E-19 132.0 15.1 114 194-307 2-115 (115)
290 3lyx_A Sensory BOX/ggdef domai 99.6 2E-14 6.7E-19 132.6 15.0 121 185-308 3-123 (124)
291 2vv6_A FIXL, sensor protein FI 99.6 6.7E-15 2.3E-19 137.9 11.6 113 197-314 1-117 (119)
292 4eet_B Phototropin-2; LOV, blu 99.6 2.8E-14 9.7E-19 130.8 14.9 107 477-586 2-115 (115)
293 3k3c_A Protein RV1364C/MT1410; 99.6 3.7E-15 1.3E-19 146.8 9.5 126 185-315 13-144 (158)
294 3mr0_A Sensory box histidine k 99.6 1.6E-14 5.6E-19 140.2 13.8 123 474-605 11-139 (142)
295 3t50_A Blue-light-activated hi 99.6 1.1E-14 3.8E-19 137.3 12.2 109 477-588 2-117 (128)
296 3mxq_A Sensor protein; PSI2, M 99.6 4.1E-15 1.4E-19 146.8 8.4 125 182-310 15-151 (152)
297 3bwl_A Sensor protein; structu 99.6 1.2E-14 4.2E-19 137.1 11.3 124 173-304 1-126 (126)
298 3bwl_A Sensor protein; structu 99.6 3.1E-14 1.1E-18 134.3 13.6 121 457-583 1-126 (126)
299 2v0u_A NPH1-1, LOV2; kinase, t 99.5 7.8E-14 2.7E-18 132.8 15.2 136 474-619 4-146 (146)
300 3kx0_X Uncharacterized protein 99.5 1.7E-14 5.7E-19 147.2 11.1 123 185-312 33-161 (185)
301 2wkq_A NPH1-1, RAS-related C3 99.5 5.5E-14 1.9E-18 157.4 15.0 121 194-314 16-136 (332)
302 3luq_A Sensor protein; PAS, hi 99.5 7.9E-14 2.7E-18 127.8 13.3 112 188-304 2-114 (114)
303 3nja_A Probable ggdef family p 99.5 4.3E-14 1.5E-18 131.7 10.8 111 474-587 9-125 (125)
304 3olo_A Two-component sensor hi 99.5 8E-14 2.7E-18 129.0 11.6 102 474-583 15-118 (118)
305 2wkq_A NPH1-1, RAS-related C3 99.5 1.1E-13 3.9E-18 154.8 14.6 109 476-587 15-130 (332)
306 3h9w_A Diguanylate cyclase wit 99.5 5E-14 1.7E-18 130.9 9.4 112 198-311 2-114 (115)
307 3lyx_A Sensory BOX/ggdef domai 99.5 2.1E-13 7.3E-18 125.5 13.5 111 474-587 9-123 (124)
308 3eeh_A Putative light and redo 99.5 8.3E-14 2.9E-18 128.9 10.2 121 180-304 2-125 (125)
309 2z6d_A Phototropin-2; PAS-fold 99.5 6.1E-13 2.1E-17 123.3 16.1 112 474-588 8-126 (130)
310 2kdk_A ARYL hydrocarbon recept 99.5 1.5E-13 5.3E-18 128.4 11.9 110 475-587 6-121 (121)
311 3olo_A Two-component sensor hi 99.5 2.3E-13 7.7E-18 125.9 11.7 114 181-304 5-118 (118)
312 3mfx_A Sensory BOX/ggdef famil 99.5 1.6E-13 5.6E-18 131.6 10.6 109 474-585 9-125 (129)
313 1byw_A Protein (human ERG pota 99.5 1.3E-12 4.3E-17 117.4 15.5 107 200-306 2-110 (110)
314 4dj3_A Period circadian protei 99.5 3.4E-12 1.2E-16 140.8 21.9 101 483-586 175-283 (317)
315 3sw1_A Sensory box protein; li 99.5 4.6E-13 1.6E-17 131.8 13.5 111 474-587 27-144 (162)
316 3icy_A Sensor protein; sensory 99.4 1.3E-13 4.3E-18 127.6 8.3 115 187-304 2-118 (118)
317 3d72_A Vivid PAS protein VVD; 99.4 4.8E-13 1.6E-17 130.0 12.7 126 168-302 13-149 (149)
318 2v0u_A NPH1-1, LOV2; kinase, t 99.4 6.5E-13 2.2E-17 126.3 13.2 121 191-311 4-124 (146)
319 3mjq_A Uncharacterized protein 99.4 2E-13 7E-18 127.6 9.2 110 475-588 2-113 (126)
320 1v9y_A Heme PAS sensor protein 99.4 2.3E-13 7.8E-18 134.1 9.9 141 170-315 21-165 (167)
321 2kdk_A ARYL hydrocarbon recept 99.4 3.8E-13 1.3E-17 125.7 10.9 111 194-307 8-120 (121)
322 3k3c_A Protein RV1364C/MT1410; 99.4 2.8E-13 9.6E-18 133.2 10.2 109 474-587 19-137 (158)
323 3h9w_A Diguanylate cyclase wit 99.4 2.8E-13 9.4E-18 125.8 8.2 105 481-588 2-112 (115)
324 3mjq_A Uncharacterized protein 99.4 4.3E-13 1.5E-17 125.4 9.5 118 192-315 2-119 (126)
325 3gdi_A Period circadian protei 99.4 1.3E-12 4.6E-17 143.6 14.2 101 483-586 166-273 (309)
326 3luq_A Sensor protein; PAS, hi 99.4 1.9E-12 6.7E-17 118.4 12.9 106 474-583 5-114 (114)
327 2l0w_A Potassium voltage-gated 99.4 4.8E-12 1.6E-16 119.1 15.9 118 189-306 19-138 (138)
328 3kx0_X Uncharacterized protein 99.4 3.9E-13 1.3E-17 136.9 8.8 132 474-612 39-180 (185)
329 4dj2_A Period circadian protei 99.4 2E-12 6.9E-17 142.8 14.1 103 482-587 176-285 (320)
330 3mxq_A Sensor protein; PSI2, M 99.4 7.9E-13 2.7E-17 130.4 8.5 110 474-587 24-149 (152)
331 3mfx_A Sensory BOX/ggdef famil 99.4 2.2E-12 7.7E-17 123.6 11.1 112 188-305 6-124 (129)
332 3vol_A Aerotaxis transducer AE 99.4 5.1E-12 1.7E-16 134.2 15.0 119 184-315 17-147 (233)
333 3icy_A Sensor protein; sensory 99.3 1.3E-12 4.3E-17 120.8 7.9 107 474-583 6-118 (118)
334 1v9y_A Heme PAS sensor protein 99.3 5.9E-12 2E-16 123.8 12.1 112 473-587 41-158 (167)
335 1byw_A Protein (human ERG pota 99.3 1.7E-11 5.6E-16 110.0 13.6 103 483-585 2-110 (110)
336 3eeh_A Putative light and redo 99.3 3.2E-12 1.1E-16 118.1 9.1 106 474-583 13-125 (125)
337 4eho_A Bacteriophytochrome, PA 99.3 2.4E-13 8.2E-18 165.2 1.4 119 188-310 517-635 (635)
338 2l0w_A Potassium voltage-gated 99.3 1.9E-11 6.4E-16 115.0 13.6 109 474-585 21-138 (138)
339 4eho_A Bacteriophytochrome, PA 99.3 2E-12 6.9E-17 157.1 6.9 112 473-588 519-634 (635)
340 3d72_A Vivid PAS protein VVD; 99.3 1.5E-11 5E-16 119.4 11.3 103 475-581 29-149 (149)
341 3tm0_A Aminoglycoside 3'-phosp 99.3 2.2E-11 7.4E-16 131.5 13.2 139 665-815 14-212 (263)
342 4hi4_A Aerotaxis transducer AE 99.2 4.6E-11 1.6E-15 112.4 12.8 106 188-306 4-121 (121)
343 2vlg_A Sporulation kinase A; h 99.2 1E-11 3.5E-16 115.6 7.8 92 476-573 3-94 (111)
344 3fc7_A HTR-like protein, senso 99.2 5.5E-12 1.9E-16 117.9 5.6 108 187-304 17-125 (125)
345 2qkp_A Uncharacterized protein 99.2 2.4E-11 8.2E-16 119.7 9.8 118 188-312 18-139 (151)
346 3fg8_A Uncharacterized protein 99.2 1.4E-11 4.8E-16 115.3 7.5 105 474-585 14-118 (118)
347 3fc7_A HTR-like protein, senso 99.2 1.8E-11 6E-16 114.4 7.0 101 474-583 21-125 (125)
348 1ll8_A PAS kinase; PAS domain, 99.2 7.9E-12 2.7E-16 115.8 4.1 100 480-583 6-113 (114)
349 4f3l_A Mclock, circadian locom 99.2 2.3E-11 7.9E-16 137.8 8.6 108 200-310 252-360 (361)
350 3fg8_A Uncharacterized protein 99.2 9.5E-12 3.2E-16 116.5 4.1 110 186-306 9-118 (118)
351 2vlg_A Sporulation kinase A; h 99.2 3.3E-11 1.1E-15 112.1 7.3 94 193-292 3-96 (111)
352 3b33_A Sensor protein; structu 99.2 1.1E-10 3.6E-15 107.9 10.3 107 190-304 8-115 (115)
353 3b33_A Sensor protein; structu 99.1 2.8E-10 9.5E-15 105.1 10.5 104 474-583 9-115 (115)
354 4f3l_B BMAL1B; BHLH, PAS, circ 99.1 9.6E-11 3.3E-15 133.8 8.3 108 198-308 277-386 (387)
355 1ll8_A PAS kinase; PAS domain, 99.1 5.6E-11 1.9E-15 110.0 4.0 102 197-304 6-113 (114)
356 4hi4_A Aerotaxis transducer AE 99.1 7.6E-10 2.6E-14 104.0 11.7 99 474-585 7-121 (121)
357 3vol_A Aerotaxis transducer AE 99.1 4.8E-10 1.6E-14 118.9 11.1 101 474-587 24-140 (233)
358 1nd4_A Aminoglycoside 3'-phosp 99.0 4.4E-10 1.5E-14 120.5 10.6 135 665-816 20-214 (264)
359 3a0r_A Sensor protein; four he 99.0 3.1E-10 1.1E-14 127.4 7.6 130 474-613 10-144 (349)
360 3dxp_A Putative acyl-COA dehyd 99.0 1E-09 3.5E-14 124.2 11.5 142 667-816 40-248 (359)
361 2w0n_A Sensor protein DCUS; si 99.0 1.7E-10 5.8E-15 106.1 3.3 109 181-304 7-118 (118)
362 3a0r_A Sensor protein; four he 99.0 4.1E-10 1.4E-14 126.4 7.1 121 184-314 3-124 (349)
363 3cax_A Uncharacterized protein 99.0 8.3E-10 2.9E-14 125.2 9.2 120 184-312 234-353 (369)
364 2qkp_A Uncharacterized protein 98.9 1.5E-09 5.1E-14 106.8 8.7 109 474-588 21-136 (151)
365 3a0s_A Sensor protein; PAS-fol 98.9 9.5E-09 3.3E-13 89.4 12.3 95 198-302 1-96 (96)
366 3sg8_A APH(2'')-ID; antibiotic 98.9 1.7E-09 5.8E-14 119.4 8.2 133 670-816 25-223 (304)
367 2ykf_A Pdtas, probable sensor 98.4 2.6E-10 9E-15 125.7 0.0 104 475-587 173-288 (305)
368 1nwz_A PYP, photoactive yellow 98.8 2.2E-08 7.5E-13 93.8 12.4 100 192-297 20-121 (125)
369 1mzu_A PPR; photoactive yellow 98.8 2.7E-08 9.2E-13 93.4 12.0 99 193-297 26-126 (129)
370 1nwz_A PYP, photoactive yellow 98.8 2.8E-08 9.7E-13 93.1 12.1 95 475-573 20-116 (125)
371 2jhe_A Transcription regulator 98.8 5.8E-09 2E-13 106.1 6.9 108 185-307 76-189 (190)
372 1mzu_A PPR; photoactive yellow 98.8 4E-08 1.4E-12 92.2 11.8 94 476-573 26-121 (129)
373 2ykf_A Pdtas, probable sensor 98.2 8.8E-10 3E-14 121.4 0.0 161 146-317 107-297 (305)
374 2w0n_A Sensor protein DCUS; si 98.7 2.3E-09 7.9E-14 98.4 2.6 96 474-583 17-118 (118)
375 3rty_A Period circadian protei 98.7 1.8E-08 6.1E-13 112.2 10.2 106 199-307 154-265 (339)
376 3a0s_A Sensor protein; PAS-fol 98.7 4.6E-08 1.6E-12 85.0 10.7 91 481-581 1-96 (96)
377 3r70_A Aminoglycoside phosphot 98.7 1.1E-07 3.7E-12 105.7 12.7 133 666-816 38-237 (320)
378 3cax_A Uncharacterized protein 98.6 3.7E-08 1.3E-12 111.6 9.0 107 474-589 241-351 (369)
379 4dj3_A Period circadian protei 98.6 1.9E-07 6.5E-12 102.8 11.7 97 210-306 182-282 (317)
380 2jhe_A Transcription regulator 98.5 6.9E-08 2.4E-12 98.0 6.6 99 474-587 82-190 (190)
381 3gdi_A Period circadian protei 98.5 3.4E-07 1.2E-11 100.5 12.1 98 210-307 173-273 (309)
382 4dj2_A Period circadian protei 98.5 2.6E-07 8.8E-12 101.9 9.6 104 201-307 178-284 (320)
383 4gkh_A Aminoglycoside 3'-phosp 98.5 1.6E-06 5.4E-11 93.5 15.0 133 672-816 31-223 (272)
384 3tdw_A Gentamicin resistance p 98.5 1.1E-06 3.9E-11 96.8 14.0 133 670-816 24-224 (306)
385 3ovc_A Hygromycin-B 4-O-kinase 98.3 2.1E-06 7.2E-11 96.9 11.5 77 667-753 43-122 (362)
386 2olc_A MTR kinase, methylthior 98.1 7.8E-06 2.7E-10 93.4 9.9 81 669-751 34-121 (397)
387 3ats_A Putative uncharacterize 98.0 2.4E-05 8.4E-10 87.8 11.8 86 668-753 23-121 (357)
388 3d1u_A Putative fructosamine-3 97.9 1.4E-05 4.9E-10 87.1 8.3 78 667-752 17-97 (288)
389 2q83_A YTAA protein; 2635576, 97.9 0.0001 3.4E-09 81.9 14.6 137 670-815 37-251 (346)
390 3jr1_A Putative fructosamine-3 97.6 0.00037 1.3E-08 76.6 13.4 77 668-752 39-118 (312)
391 2pyw_A Uncharacterized protein 97.5 0.00042 1.4E-08 79.6 11.9 77 669-749 38-122 (420)
392 3dxq_A Choline/ethanolamine ki 97.3 0.00033 1.1E-08 76.5 8.4 71 670-752 23-95 (301)
393 3feg_A Choline/ethanolamine ki 97.2 0.001 3.5E-08 75.1 10.1 139 670-816 55-254 (379)
394 1oj5_A Steroid receptor coacti 97.2 0.00047 1.6E-08 64.2 5.9 99 483-585 8-115 (132)
395 3csv_A Aminoglycoside phosphot 97.1 0.0012 4.2E-08 73.0 10.1 137 671-816 24-217 (333)
396 2ppq_A HSK, HK, homoserine kin 97.1 0.0016 5.5E-08 71.6 10.8 144 666-816 23-217 (322)
397 1nw1_A Choline kinase (49.2 KD 97.1 0.0013 4.5E-08 75.7 10.3 75 669-752 77-159 (429)
398 1oj5_A Steroid receptor coacti 97.1 0.00046 1.6E-08 64.3 5.1 95 209-304 14-113 (132)
399 2yle_A Protein spire homolog 1 97.0 0.005 1.7E-07 62.8 11.9 122 750-933 33-156 (229)
400 3c5i_A Choline kinase; choline 96.9 0.0022 7.5E-08 72.2 9.8 75 670-752 38-121 (369)
401 3f7w_A Putative fructosamine-3 96.9 0.0027 9.2E-08 68.7 10.1 80 665-752 15-97 (288)
402 1zyl_A Hypothetical protein YI 96.9 0.0048 1.6E-07 67.9 11.9 138 671-816 32-223 (328)
403 2qg7_A Ethanolamine kinase PV0 96.8 0.0053 1.8E-07 71.1 12.4 75 670-752 113-188 (458)
404 3i1a_A Spectinomycin phosphotr 96.8 0.0057 2E-07 68.0 12.2 30 787-816 207-236 (339)
405 3f2s_A CK, chetk-alpha, cholin 96.4 0.011 3.7E-07 67.0 11.2 146 665-815 53-279 (401)
406 3mes_A Choline kinase; malaria 95.9 0.015 5.3E-07 66.3 8.9 75 670-752 75-157 (424)
407 3g15_A CK, chetk-alpha, cholin 94.1 0.17 5.7E-06 57.4 10.6 29 788-816 246-280 (401)
408 2ool_A Sensor protein; bacteri 86.8 0.88 3E-05 49.9 6.7 77 484-566 44-124 (337)
409 2ool_A Sensor protein; bacteri 84.3 1.2 4.2E-05 48.7 6.4 74 203-282 46-123 (337)
410 4ann_A ESSB; membrane protein, 78.8 7.7 0.00026 39.4 9.4 84 723-814 43-126 (215)
411 4ano_A ESSB; membrane protein, 74.0 5.9 0.0002 40.3 7.1 83 723-814 48-131 (219)
412 1p0z_A Sensor kinase CITA; tra 73.4 23 0.00077 32.5 10.6 89 188-305 38-127 (131)
413 4ew7_A Conjugative transfer: r 73.3 19 0.00066 31.4 8.8 92 474-573 22-114 (127)
414 4dah_A Sporulation kinase D; a 70.5 17 0.00057 36.3 9.8 98 186-308 55-154 (217)
415 1cja_A Protein (actin-fragmin 68.4 18 0.00062 39.1 9.6 74 739-816 156-237 (342)
416 2x6h_A GH13170P, VPS34, phosph 66.9 29 0.001 41.5 12.0 82 728-814 476-574 (696)
417 3ls8_A Phosphatidylinositol 3- 61.7 1.2E+02 0.0041 35.6 15.7 82 728-814 402-500 (614)
418 3cxl_A N-chimerin; SH2, RHO-GA 57.6 1.5 5.2E-05 50.5 -1.3 64 668-735 145-214 (463)
419 3by8_A Sensor protein DCUS; hi 54.9 50 0.0017 30.6 9.2 92 187-308 43-135 (142)
420 4e04_A Bacteriophytochrome (li 51.5 30 0.001 37.4 7.8 53 202-261 32-84 (327)
421 4e04_A Bacteriophytochrome (li 47.3 39 0.0013 36.5 7.8 54 483-543 30-83 (327)
422 3hhm_A Phosphatidylinositol-4, 45.6 1.3E+02 0.0044 37.8 13.0 24 791-814 937-960 (1091)
423 4ew7_A Conjugative transfer: r 45.1 31 0.001 30.1 5.1 41 185-228 16-56 (127)
424 3lif_A Putative diguanylate cy 44.8 1E+02 0.0036 31.0 10.7 97 186-307 55-155 (254)
425 3s7o_A Bacteriophytochrome; bi 34.0 22 0.00075 38.7 3.2 42 483-526 53-94 (343)
426 2y3a_A Phosphatidylinositol-4, 28.0 60 0.002 41.0 6.1 25 791-815 940-964 (1092)
427 3s7o_A Bacteriophytochrome; bi 27.6 28 0.00094 37.9 2.6 40 202-243 55-94 (343)
428 2wxf_A Phosphatidylinositol-4, 24.8 57 0.002 40.5 5.0 24 791-814 788-811 (940)
429 3clo_A Transcriptional regulat 22.7 4.4E+02 0.015 26.7 11.0 47 184-232 28-74 (258)
430 3eps_A Isocitrate dehydrogenas 22.0 6.8E+02 0.023 28.7 12.5 137 673-818 314-483 (578)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1e-58 Score=511.69 Aligned_cols=278 Identities=36% Similarity=0.646 Sum_probs=251.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||+||+|+++.+|+.||+|++.+....+......+.+|+.+|++++|||||+++++|.+++.+|||
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46799999999999999999999999999999999876555556678899999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||||+||+|.+++.+. +.+++..++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 111 mEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~- 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK- 187 (311)
T ss_dssp ECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT-
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC-
Confidence 9999999999999875 4599999999999999999999999999999999999999999999999999976431111
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+....+
T Consensus 188 ------------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~ 243 (311)
T 4aw0_A 188 ------------------------QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIF 243 (311)
T ss_dssp ------------------------CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred ------------------------cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 11234678999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc--HHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG--ANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~--a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
.+|....+.+|. .+|.++++||.+||.+||.+|||+.++ ...|++||||++++|..++...||.+
T Consensus 244 ~~i~~~~~~~p~--~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~idw~~l~~~~pP~l 310 (311)
T 4aw0_A 244 AKIIKLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENLHQQTPPKL 310 (311)
T ss_dssp HHHHHTCCCCCT--TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCCCTTGGGSCCCCC
T ss_pred HHHHcCCCCCCc--ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCCHHHhcCCCCCCC
Confidence 999999888775 478999999999999999999997653 45689999999999999998888865
No 2
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.5e-56 Score=491.45 Aligned_cols=276 Identities=42% Similarity=0.753 Sum_probs=236.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
+..++|++++.||+|+||+||+|++. .+++.||+|++++...... ....+.+|+.+|++++|||||+++++|.+++
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~-~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~ 99 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR-DRVRTKMERDILVEVNHPFIVKLHYAFQTEG 99 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE-ECC------CCCCCCCCTTEECEEEEEEETT
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChH-HHHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 44568999999999999999999984 4688999999987544322 2346778999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|||||||+||+|.+++.+. +.+++..++.++.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+...
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 177 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESI 177 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--
T ss_pred EEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceecc
Confidence 999999999999999999875 459999999999999999999999999999999999999999999999999996432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus 178 ~~---------------------------~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 230 (304)
T 3ubd_A 178 DH---------------------------EKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKD 230 (304)
T ss_dssp ------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcC
Confidence 11 112345789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh--cCCCCC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR--CMNPPE 969 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~--~~~~~~ 969 (998)
..+.+..+.+..+.+|. .+|.++++||.+||+.||.+|||+. ..++++++||||++++|..+. .+.||.
T Consensus 231 ~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~idw~~l~~~~~~pP~ 302 (304)
T 3ubd_A 231 RKETMTMILKAKLGMPQ--FLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPF 302 (304)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSS
T ss_pred HHHHHHHHHcCCCCCCC--cCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCCCHHHHHhCCCCcCc
Confidence 99999999998877765 4789999999999999999999964 357899999999999999883 445554
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.9e-55 Score=493.55 Aligned_cols=260 Identities=25% Similarity=0.485 Sum_probs=229.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+++|++++.||+|+||.||+|+++.+|+.||||++.+... .......+.+|+.+|++|+|||||+++++|.+++.+|||
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM-SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHC-CHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 5799999999999999999999999999999999987643 344567889999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||||+||+|.+++..+....+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+....
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~---- 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS---- 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCH----
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecC----
Confidence 9999999999999877667789999999999999999999999999999999999999999999999999965320
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....+
T Consensus 178 -----------------------~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 178 -----------------------TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp -----------------------HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence 001223568999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.++..+..+ +....+|.++++||.+||+.||.+||| +.++|+||||+.
T Consensus 235 ~~i~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~ 282 (350)
T 4b9d_A 235 LKIISGSFP-PVSLHYSYDLRSLVSQLFKRNPRDRPS----VNSILEKGFIAK 282 (350)
T ss_dssp HHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHT
T ss_pred HHHHcCCCC-CCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCHHhhc
Confidence 999988754 234467999999999999999999999 999999999986
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.2e-54 Score=486.22 Aligned_cols=256 Identities=29% Similarity=0.461 Sum_probs=228.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|+++++||+|+||.||+|.++.+|+.||||++...... ..+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivm 150 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 150 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS---SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh---HHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999999765332 2345778999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||+||+|.+++.+. .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.....
T Consensus 151 Ey~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~---- 223 (346)
T 4fih_A 151 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 223 (346)
T ss_dssp CCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS----
T ss_pred eCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCC----
Confidence 999999999999763 4999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....+.
T Consensus 224 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 280 (346)
T 4fih_A 224 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 280 (346)
T ss_dssp -----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred -----------------------CCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 112346789999999999999999999999999999999999999999999888888
Q ss_pred HHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..... .++....+|.++++||.+||..||.+||| +.++|+||||+..
T Consensus 281 ~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~e~l~Hp~~~~~ 330 (346)
T 4fih_A 281 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 330 (346)
T ss_dssp HHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred HHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhcCC
Confidence 8876543 33444568999999999999999999999 9999999999863
No 5
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-54 Score=470.37 Aligned_cols=260 Identities=32% Similarity=0.522 Sum_probs=217.3
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.|..+ ++|++++.||+|+||+||+|.++.+|+.||+|++.+...........+.+|+.+|++++|||||+++++|.+.
T Consensus 8 ~G~~i--g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~ 85 (275)
T 3hyh_A 8 DGAHI--GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSK 85 (275)
T ss_dssp --------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CCCEe--eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 34444 5899999999999999999999999999999999887666666677899999999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+||||||| +|+|.+++.++ +.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||+|+..
T Consensus 86 ~~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~ 162 (275)
T 3hyh_A 86 DEIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIM 162 (275)
T ss_dssp SEEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---
T ss_pred CEEEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeec
Confidence 9999999999 78999999875 45999999999999999999999999999999999999999999999999999653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
... ....+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+
T Consensus 163 ~~~----------------------------~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 163 TDG----------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ----------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred CCC----------------------------CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 211 12235689999999999998876 5799999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.+....+..+..+...+|. .+|.++++||.+||+.||.+||| +.++|+||||+.
T Consensus 215 ~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~s----~~eil~hpw~k~ 268 (275)
T 3hyh_A 215 ESIPVLFKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV 268 (275)
T ss_dssp SSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHHCHHHHT
T ss_pred CCHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHccCChhHCcC----HHHHHcCccccc
Confidence 9988889999888877764 47899999999999999999999 999999999974
No 6
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=2.3e-53 Score=487.36 Aligned_cols=256 Identities=29% Similarity=0.461 Sum_probs=229.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|+++++||+|+||.||+|.++.+|+.||||++...... ..+.+.+|+.+|+.++|||||+++++|.+.+.+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~---~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVm 227 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ---RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 227 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS---SGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh---HHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEE
Confidence 5799999999999999999999999999999999765332 2356788999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
|||+||+|.+++... .+++..++.|+.||+.||+|||++|||||||||+||||+.+|.+||+|||+|+.+...
T Consensus 228 Ey~~gG~L~~~i~~~---~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~---- 300 (423)
T 4fie_A 228 EFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKE---- 300 (423)
T ss_dssp ECCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSS----
T ss_pred eCCCCCcHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCC----
Confidence 999999999999763 4999999999999999999999999999999999999999999999999999654311
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFA 904 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~ 904 (998)
.....+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....+.
T Consensus 301 -----------------------~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~ 357 (423)
T 4fie_A 301 -----------------------VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK 357 (423)
T ss_dssp -----------------------CCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred -----------------------CccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence 112346789999999999999999999999999999999999999999999988888
Q ss_pred HHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 905 NILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 905 ~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.|..... .++....+|.++++||.+||..||.+||| +.+||+||||+..
T Consensus 358 ~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~t----a~ell~Hp~~~~~ 407 (423)
T 4fie_A 358 MIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT----AAELLKHPFLAKA 407 (423)
T ss_dssp HHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred HHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCHHhcCC
Confidence 8876543 34445678999999999999999999999 9999999999863
No 7
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.6e-52 Score=459.93 Aligned_cols=255 Identities=23% Similarity=0.379 Sum_probs=216.6
Q ss_pred CCc-ccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee----CCe
Q 001902 665 QHF-RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KTH 739 (998)
Q Consensus 665 ~~y-~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~~ 739 (998)
++| ++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+|++++|||||+++++|.. .+.
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~ 103 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC 103 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred CceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhC-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence 344 777889999999999999999999999999986543 44456788999999999999999999999865 457
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEec-CCcEEEEeccCccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQG-NGHVSLTDFDLSCL 816 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~-~g~vkL~DFG~a~~ 816 (998)
+|||||||+||+|.+++.+. ..+++..++.|+.||+.||+|||++| ||||||||+|||++. +|.+||+|||+|+.
T Consensus 104 ~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~ 181 (290)
T 3fpq_A 104 IVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEe
Confidence 89999999999999999875 46999999999999999999999998 999999999999984 79999999999954
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....+.+||+.|||||++.+ .|+.++|||||||++|+|+||++||.+
T Consensus 182 ~~-----------------------------~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~ 231 (290)
T 3fpq_A 182 KR-----------------------------ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSE 231 (290)
T ss_dssp CC-----------------------------TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred CC-----------------------------CCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 21 012245689999999999875 599999999999999999999999987
Q ss_pred CChHHHH-HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 897 KTRQKTF-ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 897 ~~~~~~~-~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.+....+ ..+..+..+.......++++++||.+||..||.+||| +.++|+||||+.
T Consensus 232 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 232 CQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp CSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred CCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccC
Confidence 6655444 4444443333333456789999999999999999999 999999999985
No 8
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=1.1e-52 Score=469.02 Aligned_cols=262 Identities=24% Similarity=0.348 Sum_probs=222.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++.++||+|+||.||+|+++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~--------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF--------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC--------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh--------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 4678999999999999999999999999999999986532 23699999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEeccCccccCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~~~~~ 822 (998)
||||+||+|.+++++. +.+++..++.|+.||+.||+|||++|||||||||+||||+.+| .+||+|||+|+.......
T Consensus 129 mEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~ 206 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGL 206 (336)
T ss_dssp ECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-----
T ss_pred EeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCc
Confidence 9999999999999875 4599999999999999999999999999999999999999988 699999999976431110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.........++||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+....
T Consensus 207 ----------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~ 264 (336)
T 4g3f_A 207 ----------------------GKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL 264 (336)
T ss_dssp -----------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC
T ss_pred ----------------------ccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence 0011123456899999999999999999999999999999999999999999888788
Q ss_pred HHHHHhCCCCCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH---------HcCCCccCC
Q 001902 903 FANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI---------KKHPFFKGV 957 (998)
Q Consensus 903 ~~~i~~~~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el---------L~Hp~f~~~ 957 (998)
+..+.....+++ ....++..+.+||.+||++||.+|||+.++++.+ |+|||++..
T Consensus 265 ~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~ 329 (336)
T 4g3f_A 265 CLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEY 329 (336)
T ss_dssp HHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSC
T ss_pred HHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCC
Confidence 888888765443 2345789999999999999999999933332221 679998875
No 9
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.3e-51 Score=492.95 Aligned_cols=283 Identities=32% Similarity=0.604 Sum_probs=240.3
Q ss_pred hccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHH---HHHHHhCCCCCccceeE
Q 001902 656 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAE---REILDMLDHPFVPALYA 732 (998)
Q Consensus 656 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E---~~il~~l~h~nIv~l~~ 732 (998)
.....++.+++|++++.||+|+||.||+|+++.+|+.||||++.+.............+| +.+++.++|||||++++
T Consensus 180 ~e~~~~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~ 259 (689)
T 3v5w_A 180 VELNIHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259 (689)
T ss_dssp HHTTCCCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEE
T ss_pred cccCCCCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEE
Confidence 334456778899999999999999999999999999999999987654433333444444 55666779999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEecc
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFD 812 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG 812 (998)
+|.+.+.+|||||||+||+|.+++.+. +.+++..++.|+.||+.||.|||++|||||||||+||||+.+|++||+|||
T Consensus 260 ~f~~~~~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFG 337 (689)
T 3v5w_A 260 AFHTPDKLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLG 337 (689)
T ss_dssp EEECSSEEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEECCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccc
Confidence 999999999999999999999999875 459999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~ 891 (998)
+|+.... ....+.+||+.|||||++.+ ..|+.++|||||||+||+|++|.
T Consensus 338 lA~~~~~-----------------------------~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 338 LACDFSK-----------------------------KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp TCEECSS-----------------------------CCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred eeeecCC-----------------------------CCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 9965431 11235689999999999964 67999999999999999999999
Q ss_pred CCCCCC---ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh--cC
Q 001902 892 TPFRGK---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR--CM 965 (998)
Q Consensus 892 ~Pf~~~---~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~--~~ 965 (998)
+||.+. +.......+....+.+|. .+|.++++||.+||+.||.+|++.. ..+.+|++||||++++|..+. .+
T Consensus 389 ~PF~~~~~~~~~~i~~~i~~~~~~~p~--~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~idW~~l~~~~~ 466 (689)
T 3v5w_A 389 SPFRQHKTKDKHEIDRMTLTMAVELPD--SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKY 466 (689)
T ss_dssp CTTCGGGCCCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCCHHHHHTTCS
T ss_pred CCCCCCChHHHHHHHHhhcCCCCCCCc--cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCCHHHHHcCCC
Confidence 999764 334556667777766664 4799999999999999999999853 468999999999999999884 45
Q ss_pred CCCCCC
Q 001902 966 NPPELD 971 (998)
Q Consensus 966 ~~~~~~ 971 (998)
.||..|
T Consensus 467 ~pP~~P 472 (689)
T 3v5w_A 467 PPPLIP 472 (689)
T ss_dssp CCSCCC
T ss_pred CcCccC
Confidence 566554
No 10
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-50 Score=463.56 Aligned_cols=266 Identities=24% Similarity=0.367 Sum_probs=224.3
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee------CC
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------KT 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~~ 738 (998)
++|++++.||+|+||+||+|.++.+|+.||||++++.. ........+.+|+.+|+.++|||||++++++.. .+
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~-~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF-DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccc-cchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 57999999999999999999999999999999997643 234456778899999999999999999998764 36
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+||||||| +|+|.+++.+. +.+++..++.|+.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 133 ~~~ivmE~~-~g~L~~~i~~~--~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~ 209 (398)
T 4b99_A 133 SVYVVLDLM-ESDLHQIIHSS--QPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLC 209 (398)
T ss_dssp CEEEEEECC-SEEHHHHHTSS--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-
T ss_pred EEEEEEeCC-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecc
Confidence 899999999 57899999764 569999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.... .......+.+||+.|||||++.+. .++.++||||+||++|+|++|++||.+.
T Consensus 210 ~~~~-----------------------~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~ 266 (398)
T 4b99_A 210 TSPA-----------------------EHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGK 266 (398)
T ss_dssp -----------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCS
T ss_pred cCcc-----------------------ccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCC
Confidence 2111 011233567899999999999875 5689999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCC--------------------C---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 TRQKTFANILHKDLKFP--------------------S---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~--------------------~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+....+..|.......+ . ....|.++++||.+||..||.+||| +.++
T Consensus 267 ~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t----a~e~ 342 (398)
T 4b99_A 267 NYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS----AAAA 342 (398)
T ss_dssp SHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred CHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC----HHHH
Confidence 99888888765321111 0 1235789999999999999999999 9999
Q ss_pred HcCCCccCCChhh
Q 001902 949 KKHPFFKGVNWAL 961 (998)
Q Consensus 949 L~Hp~f~~~~~~~ 961 (998)
|+||||+......
T Consensus 343 L~Hp~f~~~~~p~ 355 (398)
T 4b99_A 343 LRHPFLAKYHDPD 355 (398)
T ss_dssp TTSGGGTTTCCGG
T ss_pred hcCHhhCcCCCCc
Confidence 9999999865443
No 11
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.7e-51 Score=449.84 Aligned_cols=272 Identities=22% Similarity=0.356 Sum_probs=203.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC------
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT------ 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~------ 738 (998)
++|++++.||+|+||.||+|+++.+|+.||||+++... .....+.+.+|+.+|++++|||||+++++|...+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 82 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQ 82 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS--SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccc
Confidence 46999999999999999999999999999999997542 3445577889999999999999999999987544
Q ss_pred ------eEEEEEecCCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 739 ------HVCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 739 ------~~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
++|||||||+||+|.+++..... ...+...++.|+.||+.||+|||++|||||||||+|||++.+|.+||+||
T Consensus 83 ~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 83 PSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp ----CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred ccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccC
Confidence 47999999999999999986532 23456678999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
|+|+........... .............+||+.|||||++.+..|+.++|||||||++|+|++
T Consensus 163 Gla~~~~~~~~~~~~---------------~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~-- 225 (299)
T 4g31_A 163 GLVTAMDQDEEEQTV---------------LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY-- 225 (299)
T ss_dssp CCC-----------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS--
T ss_pred ccceecCCCcccccc---------------ccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc--
Confidence 999765422111000 000011123346789999999999999999999999999999999996
Q ss_pred CCCCCCCh-HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 892 TPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 892 ~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
||.+... ...+..+.....+ +.....++.+.+||.+||+.||.+||| +.++|+||||++++|..
T Consensus 226 -Pf~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h~~~~~~~~p~ 290 (299)
T 4g31_A 226 -PFSTQMERVRTLTDVRNLKFP-PLFTQKYPCEYVMVQDMLSPSPMERPE----AINIIENAVFEDLDFPG 290 (299)
T ss_dssp -CCSSHHHHHHHHHHHHTTCCC-HHHHHHCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGCCC----
T ss_pred -CCCCccHHHHHHHHHhcCCCC-CCCcccCHHHHHHHHHHcCCChhHCcC----HHHHhcCHhhCCCCCCC
Confidence 7865332 2223333333221 111234567789999999999999999 99999999999998853
No 12
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.4e-49 Score=437.88 Aligned_cols=264 Identities=20% Similarity=0.270 Sum_probs=216.6
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++.++||+|+||+||+|.+. ..+|||+++... ......+.+.+|+.+|++++|||||++++++.. +
T Consensus 30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~-~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~ 104 (307)
T 3omv_A 30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-D 104 (307)
T ss_dssp CCBCCTTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred CcEEcHHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-C
Confidence 45678889999999999999999999863 359999987542 345567889999999999999999999998754 5
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|||||||+||+|.+++.... ..+++..+..|+.||+.||+|||+++||||||||+|||++.++.+||+|||+|+...
T Consensus 105 ~~~iVmEy~~gGsL~~~l~~~~-~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 183 (307)
T 3omv_A 105 NLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp SCEEEEECCSSCBHHHHHHTSC-CCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC--
T ss_pred eEEEEEEcCCCCCHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecc
Confidence 6899999999999999997653 459999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
... ........+||+.|||||++.+ ..|+.++|||||||+||||+||+.||.
T Consensus 184 ~~~-------------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 184 RWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cCC-------------------------cceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 110 0112345689999999999964 358899999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCCCC----CCCCcHHHHHHHHHccccCccCcCCChhcHH--HHHcCCC
Q 001902 896 GKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN--EIKKHPF 953 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~----~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~--elL~Hp~ 953 (998)
+.+....+..++......|. ...++..+.+|+.+||+.||.+|||+.+++. ++|+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 239 HINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 88777666666655443332 2457889999999999999999999766554 3467775
No 13
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=6.4e-49 Score=446.52 Aligned_cols=281 Identities=26% Similarity=0.367 Sum_probs=211.7
Q ss_pred cCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+.|++++.||+|+||+||+|.++ .+++.||+|.+.+.. ...++.+|+.+|+.+ +||||++++++|.+.++
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-----HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-----CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 368999999999999999999985 468899999886542 235678899999998 69999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCccccC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLSCLTS 818 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a~~~~ 818 (998)
+|||||||+|++|.+++. .+++..++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+...
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~ 169 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTH 169 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECT
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccC
Confidence 999999999999999984 38999999999999999999999999999999999999977 899999999997654
Q ss_pred CCCCCCCCcchhhhhc-ccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRR-HKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
................ ....................+||+.|||||++.+. .|+.++||||+||++|+|++|+.||.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 170 DTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp TCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred CccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2221100000000000 00000000001112234567899999999999876 588999999999999999999999965
Q ss_pred C-ChHHHHHHHHhC--------------------------------------C--------------CCCCCCCCCcHHH
Q 001902 897 K-TRQKTFANILHK--------------------------------------D--------------LKFPSSTPTSLHA 923 (998)
Q Consensus 897 ~-~~~~~~~~i~~~--------------------------------------~--------------~~~~~~~~~s~~l 923 (998)
. +....+..|..- . ...+.....|.++
T Consensus 250 ~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a 329 (361)
T 4f9c_A 250 ASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEA 329 (361)
T ss_dssp CSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCCHHH
T ss_pred CCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHH
Confidence 4 444444443220 0 0111234578899
Q ss_pred HHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 924 KQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 924 ~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
++||.+||..||.+||| ++|+|+||||+++.
T Consensus 330 ~DLl~~lL~~dP~~R~t----a~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 330 YDLLDKLLDLNPASRIT----AEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHHTCSCTTTSCC----HHHHHTSGGGTTC-
T ss_pred HHHHHHHCcCChhHCcC----HHHHhcCcccCCCC
Confidence 99999999999999999 99999999999863
No 14
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=4.2e-49 Score=435.75 Aligned_cols=260 Identities=22% Similarity=0.349 Sum_probs=220.3
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.|..++|.+.+.||+|+||.||+|.+. .++..||||+++.. .....+.+.+|+.+|++++|||||++++++.
T Consensus 9 ~I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 85 (299)
T 4asz_A 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA---SDNARKDFHREAELLTNLQHEHIVKFYGVCV 85 (299)
T ss_dssp BCCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC---ChHHHHHHHHHHHHHHhCCCCCCccEEEEEe
Confidence 466678999999999999999999874 35889999999753 3455678999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQ-----------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~-----------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g 804 (998)
+.+.+|||||||++|+|.+++... ....+++..+..|+.||+.||.|||+++||||||||+|||++.++
T Consensus 86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGG
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCC
Confidence 999999999999999999999763 234699999999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
.+||+|||+|+...... .........||+.|||||++.+..|+.++|||||||++
T Consensus 166 ~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl 220 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTD-------------------------YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVL 220 (299)
T ss_dssp CEEECCCSCHHHHTGGG-------------------------CEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHH
T ss_pred cEEECCcccceecCCCC-------------------------ceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHH
Confidence 99999999996532110 01122345799999999999999999999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 885 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 885 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
|||+| |+.||.+.+..+.+..+..+... +....++.++.+|+.+||+.||++||| +.+| |+|++
T Consensus 221 ~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~-~~p~~~~~~~~~li~~cl~~dP~~RPs----~~~i--~~~L~ 285 (299)
T 4asz_A 221 WEIFTYGKQPWYQLSNNEVIECITQGRVL-QRPRTCPQEVYELMLGCWQREPHMRKN----IKGI--HTLLQ 285 (299)
T ss_dssp HHHHTTTCCTTTTSCHHHHHHHHHHTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHH--HHHHH
T ss_pred HHHHcCCCCCCCCCCHHHHHHHHHcCCCC-CCCccchHHHHHHHHHHcCCChhHCcC----HHHH--HHHHH
Confidence 99998 99999999998888888876532 233457899999999999999999999 6666 34544
No 15
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=436.25 Aligned_cols=257 Identities=20% Similarity=0.300 Sum_probs=214.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+...+|.+.++||+|+||.||+|.+. .+++.||||+++.. .....+.+.+|+.+|++++|||||++++++.
T Consensus 37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~---~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~ 113 (329)
T 4aoj_A 37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA---SESARQDFQREAELLTMLQHQHIVRFFGVCT 113 (329)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCC---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC
T ss_pred ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcC---CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 455678999999999999999999874 36889999999753 4455678999999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP-------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 802 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~-------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~ 802 (998)
+.+.+|||||||++|+|.+++.... ...+++..+..|+.||+.||.|||+++||||||||+|||++.
T Consensus 114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~ 193 (329)
T 4aoj_A 114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQ 193 (329)
T ss_dssp SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEET
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECC
Confidence 9999999999999999999997642 245999999999999999999999999999999999999999
Q ss_pred CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHH
Q 001902 803 NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGI 882 (998)
Q Consensus 803 ~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~ 882 (998)
++.+||+|||+|+...... ........+||+.|||||++.+..|+.++|||||||
T Consensus 194 ~~~~Ki~DFGla~~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gv 248 (329)
T 4aoj_A 194 GLVVKIGDFGMSRDIYSTD-------------------------YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGV 248 (329)
T ss_dssp TTEEEECCCC-----------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHH
T ss_pred CCcEEEcccccceeccCCC-------------------------cceecCcccccccccChhhhcCCCCCccccccchHH
Confidence 9999999999996542111 011223467999999999999999999999999999
Q ss_pred HHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 883 LLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 883 il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+||||+| |+.||.+.+..+.+..+..+. ..+....++.++.+|+.+||+.||++||| +.+|++
T Consensus 249 vl~Ellt~G~~Pf~~~~~~~~~~~i~~g~-~~~~p~~~~~~~~~li~~cl~~dP~~RPs----~~ei~~ 312 (329)
T 4aoj_A 249 VLWEIFTYGKQPWYQLSNTEAIDCITQGR-ELERPRACPPEVYAIMRGCWQREPQQRHS----IKDVHA 312 (329)
T ss_dssp HHHHHHTTSCCTTCSSCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHH
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCC-CCCCcccccHHHHHHHHHHcCcChhHCcC----HHHHHH
Confidence 9999998 999999999888888887753 22333457899999999999999999999 555554
No 16
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.3e-48 Score=470.31 Aligned_cols=262 Identities=28% Similarity=0.466 Sum_probs=234.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
+++|++++.||+|+||.||+|.++.+|+.||+|++... .......+.+|+.+|+.++|||||+++++|.+.+.+|||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~---~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv 232 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP---HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMI 232 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc---chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 46899999999999999999999999999999999764 234456788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC--CcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN--GHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~--g~vkL~DFG~a~~~~~~~ 821 (998)
||||+||+|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++.+ |.+||+|||+|+.+...
T Consensus 233 ~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~- 310 (573)
T 3uto_A 233 YEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK- 310 (573)
T ss_dssp EECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT-
T ss_pred EeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCC-
Confidence 9999999999999654 3459999999999999999999999999999999999999854 89999999999664311
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+
T Consensus 311 ---------------------------~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~ 363 (573)
T 3uto_A 311 ---------------------------QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDE 363 (573)
T ss_dssp ---------------------------SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHH
Confidence 12234689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 902 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
.+..|......++.. ..+|.++++||.+||+.||.+||| +.++|+||||+...|..
T Consensus 364 ~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t----~~e~l~Hpw~~~~~~~~ 421 (573)
T 3uto_A 364 TLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMT----IHQALEHPWLTPGNAPG 421 (573)
T ss_dssp HHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTSCCCCTT
T ss_pred HHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcC----HHHHhcCcCcCCCCCCC
Confidence 999999887665543 567999999999999999999999 99999999999987754
No 17
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.5e-48 Score=431.44 Aligned_cols=259 Identities=21% Similarity=0.317 Sum_probs=218.3
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+...+++++++||+|+||.||+|... .+++.||||+++... .....+.+.+|+.++++++|||||++++++.
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~--~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~ 99 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA--EGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C--CC-CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc--ChHHHHHHHHHHHHHHhCCCCCCCCcceEEE
Confidence 455678899999999999999999863 467899999997542 3344578899999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 801 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~ 801 (998)
..+.+|||||||++|+|.++|.... ...+++..+..|+.||+.||.|||+++||||||||+|||++
T Consensus 100 ~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~ 179 (308)
T 4gt4_A 100 KDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY 179 (308)
T ss_dssp SSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred ECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC
Confidence 9999999999999999999996532 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHH
Q 001902 802 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 881 (998)
Q Consensus 802 ~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG 881 (998)
.++.+||+|||+|+...... ........+||+.|||||++.+..|+.++||||||
T Consensus 180 ~~~~~Ki~DFGlar~~~~~~-------------------------~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG 234 (308)
T 4gt4_A 180 DKLNVKISDLGLFREVYAAD-------------------------YYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG 234 (308)
T ss_dssp GGGCEEECCSCCBCGGGGGG-------------------------CBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCCEEECCcccceeccCCC-------------------------ceeEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence 99999999999996543111 11123456799999999999999999999999999
Q ss_pred HHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 882 ILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 882 ~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
|+||||+| |..||.+.+..+.+..+..+.. .+....++.++.+|+.+||+.||.+|||+.+++..
T Consensus 235 vvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~-~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~ 300 (308)
T 4gt4_A 235 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV-LPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR 300 (308)
T ss_dssp HHHHHHHTTTCCTTTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-CCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999998 9999999998888887776543 33445678999999999999999999995554433
No 18
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-47 Score=434.71 Aligned_cols=282 Identities=37% Similarity=0.741 Sum_probs=241.1
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT 736 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~ 736 (998)
+...+..++|++++.||+|+||.||+|+++.+|+.||+|++++...........+..|..++..+ +||||+++++++..
T Consensus 16 ~~~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~ 95 (353)
T 3txo_A 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT 95 (353)
T ss_dssp -------CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred CcCCCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe
Confidence 34456778999999999999999999999999999999999876554555667788999999998 79999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+.+|+|||||+|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 99999999999999999999775 4599999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 174 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 174 GICN---------------------------GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp SCC------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccC---------------------------CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 2110 1123456899999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
.+....+..+......+|.. .+..+.+||.+||+.||.+||++. ..+.++++||||++++|..+ +.+.||..
T Consensus 227 ~~~~~~~~~i~~~~~~~p~~--~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~~w~~l~~~~~~~p~~ 302 (353)
T 3txo_A 227 ENEDDLFEAILNDEVVYPTW--LHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFR 302 (353)
T ss_dssp SSHHHHHHHHHHCCCCCCTT--SCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred CCHHHHHHHHHcCCCCCCCC--CCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCCCHHHHhcCcCCCCcc
Confidence 99999999999988877754 688999999999999999999952 33489999999999999987 44555554
No 19
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=5.5e-47 Score=428.01 Aligned_cols=279 Identities=40% Similarity=0.764 Sum_probs=244.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||+|.+..+|+.||+|++++...........+.+|+.+++.++||||+++++++...+.+|
T Consensus 2 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~ 81 (337)
T 1o6l_A 2 VTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC 81 (337)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred CChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence 34678999999999999999999999999999999998765444455677889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 82 lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~- 158 (337)
T 1o6l_A 82 FVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD- 158 (337)
T ss_dssp EEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCT-
T ss_pred EEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccC-
Confidence 999999999999999764 45999999999999999999999999999999999999999999999999998542110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 212 (337)
T 1o6l_A 159 --------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212 (337)
T ss_dssp --------------------------TCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred --------------------------CCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence 112345689999999999999999999999999999999999999999999888
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELD 971 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~ 971 (998)
.+..+......+|. .++.++.+||.+||..||.+||+.. ..+.++++||||++++|..+ ..+.||..+
T Consensus 213 ~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~~~~~~~~~~~~pp~~p 283 (337)
T 1o6l_A 213 LFELILMEEIRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKP 283 (337)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCCCHHHHHhCCCCCCCCC
Confidence 88888888777664 4689999999999999999999321 12999999999999999877 445566554
No 20
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.5e-47 Score=432.50 Aligned_cols=261 Identities=24% Similarity=0.360 Sum_probs=218.4
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCccceeEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYAS 733 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~ 733 (998)
+++..++|++.+.||+|+||.||+|.+..+ ++.||+|.+.... .......+.+|+.+|.+++| ||||+++++
T Consensus 59 wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~--~~~~~~~~~~E~~il~~l~hhpnIV~l~g~ 136 (353)
T 4ase_A 59 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 136 (353)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEcccc--ChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence 456678999999999999999999998654 4689999997643 33456778999999999965 899999999
Q ss_pred Eee-CCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 734 FQT-KTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 734 ~~~-~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
|.. ++.+|||||||++|+|.++|+... ...+++..+..++.||+.||.|||+++||||||||+||
T Consensus 137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI 216 (353)
T 4ase_A 137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI 216 (353)
T ss_dssp ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence 865 467899999999999999997532 23589999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.++.+||+|||+|+....... .......+||+.|||||++.+..|+.++|||
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~-------------------------~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVw 271 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVW 271 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHH
T ss_pred eeCCCCCEEECcchhhhhcccCCC-------------------------ceeeccccccccccCHHHHhcCCCCCcccEe
Confidence 999999999999999965431111 1123456799999999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
||||+||||+| |..||.+.+....+..++......+....++.++.+||.+||+.||.+||| +.+|++|
T Consensus 272 S~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt----~~eil~~ 341 (353)
T 4ase_A 272 SFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 341 (353)
T ss_dssp HHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcC----HHHHHHH
Confidence 99999999998 999999877655555555444444444567899999999999999999999 7777766
No 21
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-46 Score=421.35 Aligned_cols=275 Identities=41% Similarity=0.796 Sum_probs=242.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~ 82 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIF 82 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEE
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEE
Confidence 34578999999999999999999999999999999998764444445677888999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 83 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 83 MIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp EEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred EEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 999999999999999875 4599999999999999999999999999999999999999999999999999854320
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 159 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~ 210 (318)
T 1fot_A 159 ----------------------------VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMK 210 (318)
T ss_dssp ----------------------------CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ----------------------------ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHH
Confidence 1234579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhh--cCCCCCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR--CMNPPEL 970 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~--~~~~~~~ 970 (998)
.+..+......+|. ..+.++.+||.+||..||.+||+..+ .++++++||||++++|..+. .+.||..
T Consensus 211 ~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~~~~~~~~~~~~~p~~ 280 (318)
T 1fot_A 211 TYEKILNAELRFPP--FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYE 280 (318)
T ss_dssp HHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSCCHHHHHTTCSCCSCC
T ss_pred HHHHHHhCCCCCCC--CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCCCHHHHHhCCCCCCCC
Confidence 99999988777664 46889999999999999999994332 39999999999999998873 3444443
No 22
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9.1e-47 Score=431.92 Aligned_cols=280 Identities=38% Similarity=0.691 Sum_probs=238.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+..|..+ ++.++||||+++++++...+.
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~ 113 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADK 113 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCE
Confidence 4556799999999999999999999999999999999988766555556667777776 567899999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|++||+|||+++....
T Consensus 114 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 114 LYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 99999999999999999874 4589999999999999999999999999999999999999999999999999854211
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 192 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 244 (373)
T 2r5t_A 192 H---------------------------NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT 244 (373)
T ss_dssp C---------------------------CCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH
T ss_pred C---------------------------CCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH
Confidence 0 1123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh--hcCCCCCCC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNPPELD 971 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~ 971 (998)
...+..+......++. .++..+.+||.+||+.||.+||++.+.+.++++||||++++|..+ +.+.||..+
T Consensus 245 ~~~~~~i~~~~~~~~~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~pp~~p 316 (373)
T 2r5t_A 245 AEMYDNILNKPLQLKP--NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNP 316 (373)
T ss_dssp HHHHHHHHHSCCCCCS--SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred HHHHHHHHhcccCCCC--CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCCCHHHHHhCCCCCCCCC
Confidence 9999999988776654 478899999999999999999998888899999999999999988 445565543
No 23
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.2e-46 Score=431.31 Aligned_cols=280 Identities=38% Similarity=0.739 Sum_probs=239.4
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++++.||+|+||.||+|+++.+++.||+|++++...........+..|..++.++ +||||++++++|...+.
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~ 127 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 127 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCE
Confidence 45677999999999999999999999999999999999987665555666788899999887 89999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+|||||+||+|..++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 128 ~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 128 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 99999999999999999875 4599999999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC--
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK-- 897 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~-- 897 (998)
........+||+.|+|||++.+..++.++|||||||++|+|++|.+||...
T Consensus 206 ---------------------------~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~ 258 (396)
T 4dc2_A 206 ---------------------------PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 258 (396)
T ss_dssp ---------------------------TTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC
T ss_pred ---------------------------CCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccc
Confidence 111234568999999999999999999999999999999999999999642
Q ss_pred -------ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhhh--cCC
Q 001902 898 -------TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVR--CMN 966 (998)
Q Consensus 898 -------~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~--~~~ 966 (998)
........+....+.+|.. ++.++.+||.+||+.||.+||++. ..+.++++||||++++|..+. .+.
T Consensus 259 ~~~~~~~~~~~~~~~i~~~~~~~p~~--~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~w~~l~~~~~~ 336 (396)
T 4dc2_A 259 SDNPDQNTEDYLFQVILEKQIRIPRS--LSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 336 (396)
T ss_dssp ------CCHHHHHHHHHHCCCCCCTT--SCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCCHHHHHTTCSC
T ss_pred ccccchhhHHHHHHHHhccccCCCCc--CCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCCHHHHHcCCCC
Confidence 2334566777777776654 789999999999999999999964 347899999999999999884 445
Q ss_pred CCCCC
Q 001902 967 PPELD 971 (998)
Q Consensus 967 ~~~~~ 971 (998)
||..+
T Consensus 337 pp~~p 341 (396)
T 4dc2_A 337 PPFKP 341 (396)
T ss_dssp CSCCC
T ss_pred CCCcC
Confidence 66553
No 24
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=8.4e-46 Score=419.92 Aligned_cols=279 Identities=38% Similarity=0.734 Sum_probs=241.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++++.||+|+||.||+|+++.+++.||+|++.+...........+..|+.++.++ +||||+++++++...+.
T Consensus 5 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 84 (345)
T 3a8x_A 5 PLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESR 84 (345)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred CCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCE
Confidence 45567999999999999999999999999999999999987666667778888999999988 89999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 85 ~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~ 162 (345)
T 3a8x_A 85 LFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 162 (345)
T ss_dssp EEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccC
Confidence 99999999999999999764 4599999999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC---
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG--- 896 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~--- 896 (998)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus 163 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 215 (345)
T 3a8x_A 163 P---------------------------GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGS 215 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC
T ss_pred C---------------------------CCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCccc
Confidence 0 1123456899999999999999999999999999999999999999975
Q ss_pred ------CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh--hcHHHHHcCCCccCCChhhhh--cCC
Q 001902 897 ------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH--EGANEIKKHPFFKGVNWALVR--CMN 966 (998)
Q Consensus 897 ------~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~--~~a~elL~Hp~f~~~~~~~~~--~~~ 966 (998)
......+..+......+|. ..+..+.+||.+||..||.+||++. ..+.++++||||++++|..+. .+.
T Consensus 216 ~~~~~~~~~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~w~~~~~~~~~ 293 (345)
T 3a8x_A 216 SDNPDQNTEDYLFQVILEKQIRIPR--SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVV 293 (345)
T ss_dssp -------CHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred ccccccccHHHHHHHHHcCCCCCCC--CCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCCHHHHHhCCCC
Confidence 2334556667777666664 4788999999999999999999963 346899999999999998873 445
Q ss_pred CCCC
Q 001902 967 PPEL 970 (998)
Q Consensus 967 ~~~~ 970 (998)
||..
T Consensus 294 ~p~~ 297 (345)
T 3a8x_A 294 PPFK 297 (345)
T ss_dssp CSCC
T ss_pred CCcC
Confidence 5543
No 25
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1e-46 Score=436.32 Aligned_cols=278 Identities=35% Similarity=0.635 Sum_probs=242.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.++.+++.||+|++.+...........+.+|+.+++.++||||++++++|.+.+.+
T Consensus 65 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~ 144 (410)
T 3v8s_A 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYL 144 (410)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEE
Confidence 35567999999999999999999999999999999999864333333344577899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||||||+||+|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 145 ~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 145 YMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp EEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 9999999999999999763 4899999999999999999999999999999999999999999999999999654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC----CCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG----HTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~----~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
. .......+||+.|+|||++.+.. ++.++|||||||++|+|++|.+||.+
T Consensus 222 ~--------------------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~ 275 (410)
T 3v8s_A 222 G--------------------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275 (410)
T ss_dssp S--------------------------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred C--------------------------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCC
Confidence 0 11234568999999999998765 78899999999999999999999999
Q ss_pred CChHHHHHHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 897 KTRQKTFANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 897 ~~~~~~~~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
.+....+..+... .+.+|....++.++++||.+||+.+|.+ |++ +.+|++||||++++|..+ +.+.||..
T Consensus 276 ~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~----~~ei~~Hp~f~~~~w~~~~~~~~~~p~~ 351 (410)
T 3v8s_A 276 DSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNG----VEEIKRHLFFKNDQWAWETLRDTVAPVV 351 (410)
T ss_dssp SSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSC----HHHHHTSGGGCCSSCCSTTGGGSCCSCC
T ss_pred CChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCC----HHHHhcCccccCCCHHHHhhcccCCCCC
Confidence 9999999888864 3567776778999999999999988888 999 999999999999988644 67777766
Q ss_pred C
Q 001902 971 D 971 (998)
Q Consensus 971 ~ 971 (998)
+
T Consensus 352 p 352 (410)
T 3v8s_A 352 P 352 (410)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.5e-46 Score=425.21 Aligned_cols=280 Identities=35% Similarity=0.682 Sum_probs=245.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++++.||+|+||.||+|.+..+|+.||+|++++...........+..|..++..+ +||||+++++++...+.
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~ 95 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDR 95 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCE
Confidence 45678999999999999999999999999999999999876544445567788899999988 89999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 96 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 96 LYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 99999999999999999864 3599999999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 174 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~ 226 (353)
T 2i0e_A 174 D---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 226 (353)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH
Confidence 0 1123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCCC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPELD 971 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~ 971 (998)
...+..+....+.+|. ..+.++.+||.+||..||.+||++. ..+.++++||||++++|..+ +.+.||..+
T Consensus 227 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~~w~~l~~~~~~~p~~p 299 (353)
T 2i0e_A 227 DELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKP 299 (353)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCCCHHHHHhCCCCCCcCC
Confidence 9999999998877765 4789999999999999999999753 35899999999999999988 455566553
No 27
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.3e-46 Score=423.04 Aligned_cols=275 Identities=38% Similarity=0.696 Sum_probs=245.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++.+.+.+|
T Consensus 38 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 117 (350)
T 1rdq_E 38 AQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117 (350)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred CCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEE
Confidence 45679999999999999999999999999999999998765444455677889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||++|++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 118 lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~-- 193 (350)
T 1rdq_E 118 MVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-- 193 (350)
T ss_dssp EEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSS--
T ss_pred EEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccC--
Confidence 999999999999999875 3599999999999999999999999999999999999999999999999999864321
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 194 ----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~ 245 (350)
T 1rdq_E 194 ----------------------------RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQ 245 (350)
T ss_dssp ----------------------------CBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ----------------------------CcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHH
Confidence 1234579999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
.+..+..+...+|. .++..+.+||.+||+.||.+||+.. +.+.+|++||||++++|..+ +.+.||..
T Consensus 246 ~~~~i~~~~~~~p~--~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~~w~~~~~~~~~~p~~ 315 (350)
T 1rdq_E 246 IYEKIVSGKVRFPS--HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFI 315 (350)
T ss_dssp HHHHHHHCCCCCCT--TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred HHHHHHcCCCCCCC--CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCCCHHHHhhccCCCCCC
Confidence 99999988777664 4689999999999999999999843 45899999999999999877 45555554
No 28
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2.2e-46 Score=424.32 Aligned_cols=275 Identities=36% Similarity=0.742 Sum_probs=238.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++++.||+|+||.||+|.++.+|+.||+|++++...........+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 35678999999999999999999999999999999999876443344556778899999877 99999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||++||+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 99999999999999999864 4599999999999999999999999999999999999999999999999999854210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 171 ~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~ 223 (345)
T 1xjd_A 171 G---------------------------DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE 223 (345)
T ss_dssp T---------------------------TCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred C---------------------------CCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH
Confidence 0 0123456899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH-HHHcCCCccCCChhhhh--cCCCCCC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN-EIKKHPFFKGVNWALVR--CMNPPEL 970 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~-elL~Hp~f~~~~~~~~~--~~~~~~~ 970 (998)
...+..+......+|. ..+.++.+||.+||..||.+||+ +. ++++||||++++|..+. .+.||..
T Consensus 224 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dp~~R~~----~~~~i~~hp~f~~~~w~~l~~~~~~~p~~ 291 (345)
T 1xjd_A 224 EELFHSIRMDNPFYPR--WLEKEAKDLLVKLFVREPEKRLG----VRGDIRQHPLFREINWEELERKEIDPPFR 291 (345)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSBT----TBSCGGGSGGGTTCCHHHHHTTCSCC---
T ss_pred HHHHHHHHhCCCCCCc--ccCHHHHHHHHHHhcCCHhHcCC----ChHHHHcCccccCCCHHHHhhCCCCCCcC
Confidence 9999999888776664 36889999999999999999999 55 89999999999999884 4455544
No 29
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=2e-46 Score=437.15 Aligned_cols=281 Identities=35% Similarity=0.634 Sum_probs=243.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.++.+++.||+|++.+...........+..|+.++..++||||++++++|.+.+.+
T Consensus 70 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 149 (437)
T 4aw2_A 70 RLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNL 149 (437)
T ss_dssp SCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEE
Confidence 45568999999999999999999999999999999999864333333344578899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||||||+||+|.+++.+. ...+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp EEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 9999999999999999764 245999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
. .......+||+.|+|||++. ...++.++|||||||++|+|++|++||.
T Consensus 229 ~--------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~ 282 (437)
T 4aw2_A 229 G--------------------------TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFY 282 (437)
T ss_dssp S--------------------------CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTC
T ss_pred C--------------------------CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCC
Confidence 1 11223468999999999997 5678999999999999999999999999
Q ss_pred CCChHHHHHHHHhC--CCCCCCC-CCCcHHHHHHHHHccccCccC--cCCChhcHHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 896 GKTRQKTFANILHK--DLKFPSS-TPTSLHAKQLMYRLLHRDPKS--RLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 896 ~~~~~~~~~~i~~~--~~~~~~~-~~~s~~l~~Ll~~~L~~dP~~--Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
+.+..+.+..++.. .+.+|.. ..++.++++||.+||+.+|.+ |++ +.++++||||++++|..++...||..
T Consensus 283 ~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~----~~eil~Hpff~~i~w~~l~~~~~p~~ 358 (437)
T 4aw2_A 283 AESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNG----IEDFKKHPFFSGIDWDNIRNCEAPYI 358 (437)
T ss_dssp CSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTT----THHHHTSGGGTTCCTTTGGGSCCSCC
T ss_pred CCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCC----HHHHhCCCccCCCCHHHHhhCCCCCC
Confidence 99998888888753 3455544 457999999999999998888 888 99999999999999999998888876
Q ss_pred CC
Q 001902 971 DA 972 (998)
Q Consensus 971 ~~ 972 (998)
+.
T Consensus 359 P~ 360 (437)
T 4aw2_A 359 PE 360 (437)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 30
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.3e-46 Score=432.26 Aligned_cols=282 Identities=35% Similarity=0.635 Sum_probs=240.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|+++.+|+.||+|++.+...........+..|+.++..++||||++++++|.+.+.+
T Consensus 57 ~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~ 136 (412)
T 2vd5_A 57 RLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYL 136 (412)
T ss_dssp SCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEE
T ss_pred cCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEE
Confidence 45568999999999999999999999999999999999865443444445678899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|||||||+||+|.+++.+.. ..+++..++.++.||+.||.|||++|||||||||+|||++.+|++||+|||+++.....
T Consensus 137 ~lVmE~~~gg~L~~~l~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 137 YLVMEYYVGGDLLTLLSKFG-ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp EEEECCCCSCBHHHHHHHHS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEcCCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 99999999999999997642 35999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-------CCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-------GAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-------~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
. .......+||+.|+|||++. ...++.++|||||||++|+|++|+.|
T Consensus 216 ~--------------------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~P 269 (412)
T 2vd5_A 216 G--------------------------TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269 (412)
T ss_dssp S--------------------------CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCT
T ss_pred C--------------------------ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCC
Confidence 0 01123468999999999997 45689999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC--CCCCCC-CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCC
Q 001902 894 FRGKTRQKTFANILHK--DLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPEL 970 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~--~~~~~~-~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~ 970 (998)
|.+.+....+..+... ...+|. ...++.++++||.+||+ +|.+|++ +..++++++||||++++|..++...||..
T Consensus 270 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlg-r~~~~ei~~Hpff~~i~w~~l~~~~~p~~ 347 (412)
T 2vd5_A 270 FYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLG-RGGAGDFRTHPFFFGLDWDGLRDSVPPFT 347 (412)
T ss_dssp TCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTT-TTTHHHHHTSGGGTTCCSTTSTTSCCSCC
T ss_pred CCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCC-CCCHHHHhcCCCcCCCCHHHHhhcCCCCC
Confidence 9999998888888753 234443 24578999999999999 9999963 12399999999999999999988777766
Q ss_pred C
Q 001902 971 D 971 (998)
Q Consensus 971 ~ 971 (998)
+
T Consensus 348 p 348 (412)
T 2vd5_A 348 P 348 (412)
T ss_dssp C
T ss_pred C
Confidence 4
No 31
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=4e-45 Score=419.27 Aligned_cols=281 Identities=32% Similarity=0.653 Sum_probs=240.5
Q ss_pred hccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 656 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 656 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
+..+..+..++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||++++++|.
T Consensus 6 ~~~~~~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 85 (384)
T 4fr4_A 6 FDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85 (384)
T ss_dssp --CCCCCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cCCCCCCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 34456778899999999999999999999999999999999998765545556678889999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
+.+.+|+||||+.|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~ 163 (384)
T 4fr4_A 86 DEEDMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA 163 (384)
T ss_dssp CSSEEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred eCCEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceee
Confidence 999999999999999999999874 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 164 ~~~~~----------------------------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~ 215 (384)
T 4fr4_A 164 MLPRE----------------------------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRR 215 (384)
T ss_dssp ECCTT----------------------------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred eccCC----------------------------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCC
Confidence 53211 12245679999999999964 458899999999999999999999
Q ss_pred CCCCC---ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh--hcCCC
Q 001902 893 PFRGK---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV--RCMNP 967 (998)
Q Consensus 893 Pf~~~---~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~--~~~~~ 967 (998)
||... .....+..+......+|. .++..+.+||.+||..||.+||+. +.++++||||++++|..+ ..+.|
T Consensus 216 Pf~~~~~~~~~~~~~~~~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~s~---~~~l~~hp~f~~~~w~~~~~~~~~p 290 (384)
T 4fr4_A 216 PYHIRSSTSSKEIVHTFETTVVTYPS--AWSQEMVSLLKKLLEPNPDQRFSQ---LSDVQNFPYMNDINWDAVFQKRLIP 290 (384)
T ss_dssp SSCCCTTSCHHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHSCSSGGGSCCS---HHHHHTSGGGTTCCHHHHHTTCSCC
T ss_pred CCCCCCCccHHHHHHHHhhcccCCCC--cCCHHHHHHHHHHhcCCHhHhccc---HHHHHcChhhhcCCHHHHHhCCCCC
Confidence 99753 334555556666555554 468899999999999999999983 789999999999999877 44555
Q ss_pred CCCC
Q 001902 968 PELD 971 (998)
Q Consensus 968 ~~~~ 971 (998)
|..+
T Consensus 291 ~~~p 294 (384)
T 4fr4_A 291 GFIP 294 (384)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 5554
No 32
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.5e-45 Score=409.18 Aligned_cols=262 Identities=29% Similarity=0.501 Sum_probs=233.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+...++|++++.||+|+||.||+|.+..+|+.||+|++.+... .......+.+|+.+++.++||||+++++++...+.+
T Consensus 11 ~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~ 89 (328)
T 3fe3_A 11 QPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQL-NPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTL 89 (328)
T ss_dssp CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CCccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEE
Confidence 4456799999999999999999999999999999999986533 445567788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 167 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG 167 (328)
T ss_dssp EEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS
T ss_pred EEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCC
Confidence 9999999999999999765 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCC-ChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
......+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+.
T Consensus 168 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~ 219 (328)
T 3fe3_A 168 ----------------------------GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL 219 (328)
T ss_dssp ----------------------------CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred ----------------------------CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH
Confidence 112345799999999999988775 799999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
......+..+....|. ..+.++.+||.+||..||.+||| +.++++||||+....
T Consensus 220 ~~~~~~i~~~~~~~p~--~~s~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~~~ 273 (328)
T 3fe3_A 220 KELRERVLRGKYRIPF--YMSTDCENLLKRFLVLNPIKRGT----LEQIMKDRWINAGHE 273 (328)
T ss_dssp HHHHHHHHHCCCCCCT--TSCHHHHHHHHHHCCSSTTTSCC----HHHHTTCTTTTTTCT
T ss_pred HHHHHHHHhCCCCCCC--CCCHHHHHHHHHHCCCChhHCcC----HHHHhcCHhhcCCCc
Confidence 9999999888776664 36889999999999999999999 999999999997543
No 33
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8.5e-45 Score=432.62 Aligned_cols=283 Identities=30% Similarity=0.589 Sum_probs=244.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.++.+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.+
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 260 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL 260 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence 45668999999999999999999999999999999999876544445567788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 741 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
|+||||++|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++....
T Consensus 261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 99999999999999987643 3469999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC-
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK- 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~- 897 (998)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.
T Consensus 341 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~ 393 (543)
T 3c4z_A 341 AG---------------------------QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG 393 (543)
T ss_dssp TT---------------------------CCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred CC---------------------------CcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence 11 01123458999999999999999999999999999999999999999875
Q ss_pred ---ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhh--cCCCCCCC
Q 001902 898 ---TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR--CMNPPELD 971 (998)
Q Consensus 898 ---~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~--~~~~~~~~ 971 (998)
........+......+| ..++.++.+||.+||..||.+||++.+ .+.+|++||||++++|..+. .+.||..+
T Consensus 394 ~~~~~~~~~~~i~~~~~~~p--~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~w~~l~~~~~~pp~~P 471 (543)
T 3c4z_A 394 EKVENKELKQRVLEQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEAGMLTPPFVP 471 (543)
T ss_dssp CCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCCHHHHHTTCSCCSCCC
T ss_pred cchhHHHHHHHHhhcccCCC--cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCCCHHHHHcCCCCCCCCC
Confidence 34566677777766665 357899999999999999999998764 57999999999999999885 45566554
Q ss_pred C
Q 001902 972 A 972 (998)
Q Consensus 972 ~ 972 (998)
.
T Consensus 472 ~ 472 (543)
T 3c4z_A 472 D 472 (543)
T ss_dssp C
T ss_pred C
Confidence 3
No 34
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.9e-45 Score=429.37 Aligned_cols=280 Identities=41% Similarity=0.779 Sum_probs=232.9
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 143 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~ 222 (446)
T 4ejn_A 143 HRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDR 222 (446)
T ss_dssp -CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTE
T ss_pred cCCChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCE
Confidence 34556789999999999999999999999999999999987655555566777889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
+|||||||++++|.+++.+. ..+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++....
T Consensus 223 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 300 (446)
T 4ejn_A 223 LCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 300 (446)
T ss_dssp EEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTC
T ss_pred EEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceecc
Confidence 99999999999999999775 459999999999999999999998 999999999999999999999999999985422
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 301 ~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 353 (446)
T 4ejn_A 301 KD---------------------------GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD 353 (446)
T ss_dssp C--------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred CC---------------------------CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCC
Confidence 11 112235689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhh--hcCCCCCC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALV--RCMNPPEL 970 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~--~~~~~~~~ 970 (998)
....+..+......+|. .++.++.+||.+||..||.+||+.. +.+.++++||||++++|..+ ..+.||..
T Consensus 354 ~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~~~~~~~~~~~~pp~~ 426 (446)
T 4ejn_A 354 HEKLFELILMEEIRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFK 426 (446)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTCCHHHHHTTCSCCSCC
T ss_pred HHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCCCHHHHhhCcCCCCcc
Confidence 98888888888777664 3688999999999999999999111 12999999999999999877 44444444
No 35
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=9.4e-45 Score=413.53 Aligned_cols=265 Identities=29% Similarity=0.452 Sum_probs=234.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+.|++.+.||+|+||.||+|.+..+|+.||+|++.+...... .....+.+|+.+++.++||||++++++|...+.+
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 4679999999999999999999999999999999986543221 2356788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC----cEEEEeccCccc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 816 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g----~vkL~DFG~a~~ 816 (998)
|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~ 168 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (361)
T ss_dssp EEEEECCCSCBHHHHHTTC--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceE
Confidence 9999999999999999764 4699999999999999999999999999999999999998777 799999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~ 220 (361)
T 2yab_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (361)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCCC----------------------------CccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 3211 112345799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 897 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.+....+..+......++.. ...+..+++||.+||..||.+||| +.++|+||||+..+|...
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~~~~~~~ 284 (361)
T 2yab_A 221 DTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDTQQA 284 (361)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSTTTSCSSHHHH
T ss_pred CCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcC----HHHHhcCcCcCCCchhhh
Confidence 99999999988877666532 457889999999999999999999 999999999999988654
No 36
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.9e-44 Score=405.98 Aligned_cols=279 Identities=43% Similarity=0.765 Sum_probs=231.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
.+..++|++++.||+|+||.||+|.+. .+|+.||+|++++.... .......+.+|+.+++.++||||+++++++..
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 92 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT 92 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence 456679999999999999999999985 68999999999865332 22344567789999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+.+|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++..
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 93 GGKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp SSCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred CCEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 99999999999999999999764 4589999999999999999999999999999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 171 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 223 (327)
T 3a62_A 171 SIHD---------------------------GTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTG 223 (327)
T ss_dssp -----------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccC---------------------------CccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCC
Confidence 2200 0112345799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhh--cCCCCCC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVR--CMNPPEL 970 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~--~~~~~~~ 970 (998)
.+....+..+......+|. .++..+.+||.+||..||.+||++. ..+.++++||||+.++|..+. ...||..
T Consensus 224 ~~~~~~~~~i~~~~~~~p~--~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~~~~~~~~~~~~p~~ 298 (327)
T 3a62_A 224 ENRKKTIDKILKCKLNLPP--YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFK 298 (327)
T ss_dssp SSHHHHHHHHHHTCCCCCT--TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCCHHHHHTTCSCCSCC
T ss_pred CCHHHHHHHHHhCCCCCCC--CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCCCHHHHhhccCCCCCC
Confidence 9998888888888776654 4688999999999999999999543 249999999999999998773 4445444
No 37
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.5e-44 Score=431.60 Aligned_cols=283 Identities=34% Similarity=0.591 Sum_probs=242.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+|+.++||||+++++++.+.+.+
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l 259 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL 259 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence 46678899999999999999999999999999999999876444444556788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++||+|.+++.......+++..++.++.||+.||.|||++|||||||||+|||++.+|.+||+|||++......
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 99999999999999998765556999999999999999999999999999999999999999999999999999653211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC--
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~-- 898 (998)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 340 ----------------------------~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~ 391 (576)
T 2acx_A 340 ----------------------------QTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391 (576)
T ss_dssp ----------------------------CCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSC
T ss_pred ----------------------------ccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccc
Confidence 11224579999999999999999999999999999999999999998753
Q ss_pred --hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh-cHHHHHcCCCccCCChhhhh--cCCCCCCCCC
Q 001902 899 --RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE-GANEIKKHPFFKGVNWALVR--CMNPPELDAP 973 (998)
Q Consensus 899 --~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~-~a~elL~Hp~f~~~~~~~~~--~~~~~~~~~p 973 (998)
.......+......++ ..++.++.+||.+||+.||.+||++.. .+.++++||||++++|..+. .+.||..+.|
T Consensus 392 ~~~~~i~~~i~~~~~~~p--~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~w~~l~~~~~~pp~~p~~ 469 (576)
T 2acx_A 392 IKREEVERLVKEVPEEYS--ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDP 469 (576)
T ss_dssp CCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCCHHHHHTTCSCCSCCCCC
T ss_pred hhHHHHHHHhhcccccCC--ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccCCHHHHhcCCCCCCCCCCc
Confidence 3445555555555554 457899999999999999999995432 38999999999999999885 4556655443
No 38
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=2e-44 Score=442.79 Aligned_cols=282 Identities=35% Similarity=0.680 Sum_probs=247.0
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
..+..++|++++.||+|+||.||+|.+..+++.||||++++...........+..|..++..+ +||+|+.++++|.+.+
T Consensus 336 ~~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~ 415 (674)
T 3pfq_A 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD 415 (674)
T ss_dssp ----CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred ccccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence 345678999999999999999999999999999999999876544445567788899999987 7999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+||||||++||+|.+++... ..+++..++.|+.||+.||.|||++|||||||||+||||+.+|.+||+|||+++...
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~ 493 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENI 493 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECC
T ss_pred EEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccc
Confidence 999999999999999999875 459999999999999999999999999999999999999999999999999986422
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .......+||+.|+|||++.+..|+.++|||||||++|+|++|.+||.+.+
T Consensus 494 ~~---------------------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~ 546 (674)
T 3pfq_A 494 WD---------------------------GVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED 546 (674)
T ss_dssp CT---------------------------TCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cC---------------------------CcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCC
Confidence 11 112345689999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC-hhcHHHHHcCCCccCCChhhh--hcCCCCCCCC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS-HEGANEIKKHPFFKGVNWALV--RCMNPPELDA 972 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~-~~~a~elL~Hp~f~~~~~~~~--~~~~~~~~~~ 972 (998)
..+.+..|....+.+|. .++.++.+||.+||..||.+||++ .+.+.+|++||||+.++|..+ +.+.||..+.
T Consensus 547 ~~~~~~~i~~~~~~~p~--~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i~w~~l~~~~~~pp~~p~ 621 (674)
T 3pfq_A 547 EDELFQSIMEHNVAYPK--SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPK 621 (674)
T ss_dssp HHHHHHHHHSSCCCCCT--TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSCCHHHHTTTCSCCSCCCB
T ss_pred HHHHHHHHHhCCCCCCc--cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCCCHHHHHhCCCCCCCCCc
Confidence 99999999998887775 478999999999999999999995 245699999999999999988 4556665543
No 39
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-44 Score=408.29 Aligned_cols=257 Identities=31% Similarity=0.537 Sum_probs=222.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.+.... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~--~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv 86 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLG--SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMV 86 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC-----CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccc--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEE
Confidence 57899999999999999999999999999999999865432 2345678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 87 ~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~-- 162 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQ--DRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK-- 162 (347)
T ss_dssp EECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred EeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC--
Confidence 9999999999999765 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+....
T Consensus 163 ------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~ 218 (347)
T 3zgw_A 163 ------------------------DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMAL 218 (347)
T ss_dssp ---------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred ------------------------CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence 011234579999999999998776 8899999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+..+..+...+|.. .+..+.+||.+||..||.+||| +.++++||||+.
T Consensus 219 ~~~i~~~~~~~p~~--~s~~~~~li~~~L~~dP~~Rps----~~eil~hp~~~~ 266 (347)
T 3zgw_A 219 YKKIMRGKYDVPKW--LSPSSILLLQQMLQVDPKKRIS----MKNLLNHPWIMQ 266 (347)
T ss_dssp HHHHHHTCCCCCTT--CCHHHHHHHHHHTCSSGGGSCC----HHHHHTCHHHHT
T ss_pred HHHHHcCCCCCCCC--CCHHHHHHHHHHcccCHhHCcC----HHHHhcCcchhc
Confidence 99999887776653 6889999999999999999999 999999999986
No 40
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=1e-43 Score=394.39 Aligned_cols=257 Identities=25% Similarity=0.407 Sum_probs=225.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .....+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 95 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ---PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVV 95 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc---cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEE
Confidence 4689999999999999999999999999999999875432 2345678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 170 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ-- 170 (297)
T ss_dssp EECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT--
T ss_pred EECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc--
Confidence 9999999999999774 48999999999999999999999999999999999999999999999999986543111
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.....
T Consensus 171 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~ 225 (297)
T 3fxz_A 171 -------------------------SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225 (297)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 1223457999999999999999999999999999999999999999998887776
Q ss_pred HHHHhCC-CCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 904 ANILHKD-LKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 904 ~~i~~~~-~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..+.... ..+.....++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 276 (297)
T 3fxz_A 226 YLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS----AKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCGGGGGC
T ss_pred HHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcC----HHHHhhChhhccc
Confidence 6665433 334444567889999999999999999999 9999999999864
No 41
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.8e-44 Score=395.53 Aligned_cols=264 Identities=31% Similarity=0.552 Sum_probs=222.9
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-----------------------hhHHHHHHHH
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----------------------RNKVHRACAE 715 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-----------------------~~~~~~~~~E 715 (998)
+..+..++|++.+.||+|+||.||+|.+..+++.||+|++....... ......+.+|
T Consensus 7 ~~~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E 86 (298)
T 2zv2_A 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQE 86 (298)
T ss_dssp ---CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHH
T ss_pred CCceeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHH
Confidence 44566789999999999999999999999999999999997653221 1224567889
Q ss_pred HHHHHhCCCCCccceeEEEee--CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001902 716 REILDMLDHPFVPALYASFQT--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 793 (998)
Q Consensus 716 ~~il~~l~h~nIv~l~~~~~~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL 793 (998)
+.+++.++||||+++++++.. ...+|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++||+||||
T Consensus 87 ~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dl 163 (298)
T 2zv2_A 87 IAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDI 163 (298)
T ss_dssp HHHHHTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCC
T ss_pred HHHHHhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCC
Confidence 999999999999999999986 6789999999999999887643 45999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC---
Q 001902 794 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--- 870 (998)
Q Consensus 794 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--- 870 (998)
||+|||++.++.+||+|||++....... .......||+.|+|||++.+..
T Consensus 164 kp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~ 216 (298)
T 2zv2_A 164 KPSNLLVGEDGHIKIADFGVSNEFKGSD---------------------------ALLSNTVGTPAFMAPESLSETRKIF 216 (298)
T ss_dssp CGGGEEECTTSCEEECCCTTCEECSSSS---------------------------CEECCCCSCGGGCCGGGCCTTCCCE
T ss_pred CHHHEEECCCCCEEEecCCCcccccccc---------------------------ccccCCcCCccccChhhhccCCCCC
Confidence 9999999999999999999986543111 1123457999999999997765
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++.++|||||||++|+|++|..||.+.........+......++....++..+.+||.+||..||.+||| +.++++
T Consensus 217 ~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s----~~e~l~ 292 (298)
T 2zv2_A 217 SGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIV----VPEIKL 292 (298)
T ss_dssp ESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTT
T ss_pred CCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCC----HHHHhc
Confidence 3678999999999999999999999988888788888877777777778999999999999999999999 999999
Q ss_pred CCCccC
Q 001902 951 HPFFKG 956 (998)
Q Consensus 951 Hp~f~~ 956 (998)
||||+.
T Consensus 293 hp~~~~ 298 (298)
T 2zv2_A 293 HPWVTR 298 (298)
T ss_dssp CHHHHC
T ss_pred CccccC
Confidence 999963
No 42
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.6e-43 Score=398.10 Aligned_cols=264 Identities=30% Similarity=0.470 Sum_probs=231.9
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC---hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN---RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~---~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+.|++.+.||+|+||.||+|.+..+|+.||+|++....... ......+.+|+.+++.++||||+++++++...+.+|
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 57999999999999999999999999999999998653322 123567889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC----cEEEEeccCcccc
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCLT 817 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g----~vkL~DFG~a~~~ 817 (998)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++...
T Consensus 91 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~ 168 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKI 168 (326)
T ss_dssp EEEECCCSCBHHHHHTTS--SCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEEC
T ss_pred EEEEcCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeEC
Confidence 999999999999999764 4599999999999999999999999999999999999999887 8999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 169 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~ 220 (326)
T 2y0a_A 169 DFG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGD 220 (326)
T ss_dssp CTT----------------------------SCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred CCC----------------------------CccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCC
Confidence 211 1123457999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 898 TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
+....+..+......++.. ...+..+.+||.+||..||.+||| +.++|+||||+..++...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~~~~~ 283 (326)
T 2y0a_A 221 TKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMT----IQDSLQHPWIKPKDTQQA 283 (326)
T ss_dssp SHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCC----HHHHHHSTTTSCCSHHHH
T ss_pred CHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcCCCccCCcchhh
Confidence 8888888887766555432 456889999999999999999999 999999999999887544
No 43
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.5e-43 Score=412.30 Aligned_cols=259 Identities=29% Similarity=0.470 Sum_probs=228.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKL-SARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSC-HHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3579999999999999999999999999999999986543 334456788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe---cCCcEEEEeccCccccCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~---~~g~vkL~DFG~a~~~~~~ 820 (998)
||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 89 ~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~ 166 (444)
T 3soa_A 89 FDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166 (444)
T ss_dssp ECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTT
T ss_pred EEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCC
Confidence 9999999999999875 4599999999999999999999999999999999999998 4678999999999554311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
. ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 167 ~---------------------------~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~ 219 (444)
T 3soa_A 167 Q---------------------------QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219 (444)
T ss_dssp C---------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred C---------------------------ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH
Confidence 1 1123467999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 901 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
..+..+..+...++. ...++.++.+||.+||..||.+||| +.++|+||||+.
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----a~e~L~hp~~~~ 273 (444)
T 3soa_A 220 RLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT----AAEALKHPWISH 273 (444)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSCTTHH
T ss_pred HHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCC----HHHHhcCccccC
Confidence 999999888765554 3567999999999999999999999 999999999975
No 44
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-43 Score=407.57 Aligned_cols=275 Identities=20% Similarity=0.330 Sum_probs=224.5
Q ss_pred cccCCcccccccCCC--CceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 662 INLQHFRPIKPLGSG--DTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G--~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
...++|++++.||+| +||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+.
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 100 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEAC-SNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNE 100 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEeccccc-ChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCE
Confidence 346789999999999 999999999999999999999986533 34566778889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||.+.....
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 101 LWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 99999999999999999876556799999999999999999999999999999999999999999999999998854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.... ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus 181 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 181 HGQR--------------------QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp TTEE--------------------CSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccc--------------------ccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 1000 0001112234579999999999987 57899999999999999999999999886
Q ss_pred ChHHHHHHHHhCCCC--------------------------------------------CCCCCCCcHHHHHHHHHcccc
Q 001902 898 TRQKTFANILHKDLK--------------------------------------------FPSSTPTSLHAKQLMYRLLHR 933 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~--------------------------------------------~~~~~~~s~~l~~Ll~~~L~~ 933 (998)
+....+..+.....+ .+.....+..+.+||.+||+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~ 320 (389)
T 3gni_B 241 PATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQR 320 (389)
T ss_dssp CSTTHHHHC--------------------------------------------------------CCHHHHHHHHHHTCS
T ss_pred CHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhc
Confidence 665555443332211 012234678899999999999
Q ss_pred CccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 934 DPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 934 dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
||.+||| +.++|+||||+.+.+..
T Consensus 321 dP~~Rpt----a~ell~hp~f~~~~~~~ 344 (389)
T 3gni_B 321 NPDARPS----ASTLLNHSFFKQIKRRA 344 (389)
T ss_dssp CTTTSCC----HHHHTTSGGGGGC---C
T ss_pred CcccCCC----HHHHhcCHHHHHHhhcc
Confidence 9999999 99999999999987753
No 45
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-43 Score=397.73 Aligned_cols=257 Identities=26% Similarity=0.415 Sum_probs=228.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 79 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMI 79 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC----THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC----cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEE
Confidence 46899999999999999999999999999999998743 23445678999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--CCcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~--~g~vkL~DFG~a~~~~~~~ 821 (998)
||||+|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 80 ~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~- 157 (321)
T 1tki_A 80 FEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG- 157 (321)
T ss_dssp ECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT-
T ss_pred EEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC-
Confidence 9999999999999764 245999999999999999999999999999999999999997 789999999998653211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 158 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 210 (321)
T 1tki_A 158 ---------------------------DNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210 (321)
T ss_dssp ---------------------------CEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------CccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHH
Confidence 11234579999999999999889999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+......++. ...++.++.+||.+||..||.+||| +.++|+||||+..
T Consensus 211 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~~ 264 (321)
T 1tki_A 211 IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT----ASEALQHPWLKQK 264 (321)
T ss_dssp HHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHSC
T ss_pred HHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcC----HHHHhcChhhccC
Confidence 99999888766553 2457889999999999999999999 9999999999874
No 46
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.8e-43 Score=401.99 Aligned_cols=258 Identities=29% Similarity=0.488 Sum_probs=229.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3579999999999999999999999999999999986533 344567788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccccCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~~~~~ 820 (998)
||||+|++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++......
T Consensus 107 ~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~ 184 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184 (362)
T ss_dssp ECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTC
T ss_pred EecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCC
Confidence 9999999999998764 459999999999999999999999999999999999999865 45999999998553211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
......+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus 185 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~ 236 (362)
T 2bdw_A 185 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 236 (362)
T ss_dssp ----------------------------CSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------cccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH
Confidence 1123457999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 901 KTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
..+..+..+...++.. ..++.++.+||.+||..||.+||+ +.++|+||||+.
T Consensus 237 ~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~~~~ 290 (362)
T 2bdw_A 237 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICN 290 (362)
T ss_dssp HHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSHHHHT
T ss_pred HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCcccCC
Confidence 8888888877665543 457899999999999999999999 999999999975
No 47
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6e-44 Score=396.63 Aligned_cols=248 Identities=22% Similarity=0.284 Sum_probs=187.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC----eE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----HV 740 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~~ 740 (998)
.+|.+.+.||+|+||.||+|.+ +|+.||||+++... ........|+..+.+++|||||++++++...+ .+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~----~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~ 76 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc----hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEE
Confidence 3688889999999999999997 68999999987532 11122334566667889999999999997653 68
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEEecCCcEEEEecc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLTDFD 812 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------~IiHrDLkP~NILi~~~g~vkL~DFG 812 (998)
|||||||++|+|.++++.. .+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+|||
T Consensus 77 ~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp EEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 9999999999999999874 489999999999999999999987 99999999999999999999999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC------CCCChhHHHHHHHHHHH
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILLYE 886 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~sDIwSlG~il~e 886 (998)
+|+........ ........+||+.|||||++.+. .++.++|||||||+|||
T Consensus 154 la~~~~~~~~~-----------------------~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~E 210 (303)
T 3hmm_A 154 LAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWE 210 (303)
T ss_dssp TCEEEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred CCccccCCCCc-----------------------eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHH
Confidence 99654321110 01122346899999999999765 35679999999999999
Q ss_pred HHcCCCCCCCC---------------ChHHHHHHHHhCCC--CCCCC---CCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 887 MLYGYTPFRGK---------------TRQKTFANILHKDL--KFPSS---TPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 887 LltG~~Pf~~~---------------~~~~~~~~i~~~~~--~~~~~---~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|+||.+||... ........+..... .+|.. ...+..+.+|+.+||+.||.+|||+.++
T Consensus 211 l~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei 288 (303)
T 3hmm_A 211 IARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp HHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred HHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHH
Confidence 99998766321 11223333333332 22221 1123467899999999999999995444
No 48
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=8e-43 Score=385.73 Aligned_cols=259 Identities=22% Similarity=0.399 Sum_probs=216.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++++++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF 80 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS-STTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC-cCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence 589999999999999999999999999999999986542 3445577889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++ +|.+.+... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 e~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 154 (292)
T 3o0g_A 81 EFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIP---- 154 (292)
T ss_dssp ECCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSC----
T ss_pred ecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCc----
Confidence 99965 666655543 245999999999999999999999999999999999999999999999999998654211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHcCCCC-CCCCChHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTP-FRGKTRQKT 902 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLltG~~P-f~~~~~~~~ 902 (998)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+....
T Consensus 155 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~ 211 (292)
T 3o0g_A 155 -----------------------VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211 (292)
T ss_dssp -----------------------CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHH
T ss_pred -----------------------cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence 11223457899999999998766 79999999999999999987777 556666666
Q ss_pred HHHHHhCCCC-----C----------------------CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 903 FANILHKDLK-----F----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 903 ~~~i~~~~~~-----~----------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+..+...... + ......+..+.+||.+||+.||.+||| +.++|+||||+
T Consensus 212 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~ 287 (292)
T 3o0g_A 212 LKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRIS----AEEALQHPYFS 287 (292)
T ss_dssp HHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGT
T ss_pred HHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCC----HHHHhcCcccc
Confidence 6665441100 0 011246788999999999999999999 99999999999
Q ss_pred CC
Q 001902 956 GV 957 (998)
Q Consensus 956 ~~ 957 (998)
.+
T Consensus 288 ~~ 289 (292)
T 3o0g_A 288 DF 289 (292)
T ss_dssp TC
T ss_pred cC
Confidence 74
No 49
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.8e-43 Score=390.92 Aligned_cols=265 Identities=24% Similarity=0.403 Sum_probs=217.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+-..++|++++.||+|+||.||+|.+. +|+.||+|++.... ........+.+|+.+++.++||||+++++++...+.+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 94 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDA-EDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCL 94 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC-------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCE
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEeccc-ccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEE
Confidence 344689999999999999999999994 58999999997543 2333456788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++ ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 95 ~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 95 TLVFEFME-KDLKKVLDENK-TGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEEEECCS-EEHHHHHHTCT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEEEcCCC-CCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 99999996 58888876643 45999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+.
T Consensus 173 ---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 173 ---------------------------VRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp ---------------------------CC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred ---------------------------cccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 112234578999999999977 5689999999999999999999999998777
Q ss_pred HHHHHHHHhC--CCCCC--------------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHK--DLKFP--------------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~--~~~~~--------------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
...+..+... ..... .....+.++.+||.+||+.||.+||| +.++|+|
T Consensus 226 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~h 301 (311)
T 3niz_A 226 DDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS----ARDAMNH 301 (311)
T ss_dssp TTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCC----HHHHHTS
T ss_pred HHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCC----HHHHhcC
Confidence 6666655431 10000 01235678999999999999999999 9999999
Q ss_pred CCccCCChh
Q 001902 952 PFFKGVNWA 960 (998)
Q Consensus 952 p~f~~~~~~ 960 (998)
|||+.+++.
T Consensus 302 p~f~~~~~~ 310 (311)
T 3niz_A 302 PYFKDLDPQ 310 (311)
T ss_dssp GGGTTSCTT
T ss_pred cccccCCcc
Confidence 999997653
No 50
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-43 Score=402.33 Aligned_cols=283 Identities=27% Similarity=0.417 Sum_probs=215.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCC--eE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKT--HV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~--~~ 740 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++... .........+.+|+.+++.+. ||||+++++++...+ .+
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEECC---CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEeccc-ccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 47899999999999999999999999999999998754 334455677889999999997 999999999997544 79
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+|||||+ ++|..++... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|......
T Consensus 87 ~lv~e~~~-~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 162 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNI 162 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSC
T ss_pred EEEecccC-cCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccc
Confidence 99999995 6899998763 5899999999999999999999999999999999999999999999999999765321
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
........ .. ..................+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+.
T Consensus 163 ~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~ 236 (388)
T 3oz6_A 163 RRVTNNIP-----LS-INENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSST 236 (388)
T ss_dssp CCCCCCGG-----GC-CC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred cccccccc-----cc-ccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 11100000 00 00000000111223455789999999999987 6789999999999999999999999999988
Q ss_pred HHHHHHHHhCCCCCC----------------------------------------------CCCCCcHHHHHHHHHcccc
Q 001902 900 QKTFANILHKDLKFP----------------------------------------------SSTPTSLHAKQLMYRLLHR 933 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~----------------------------------------------~~~~~s~~l~~Ll~~~L~~ 933 (998)
...+..++... ..| .....+.++.+||.+||..
T Consensus 237 ~~~~~~i~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 237 MNQLERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp HHHHHHHHHHH-CCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred HHHHHHHHHhc-CCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 88877775311 111 1124678999999999999
Q ss_pred CccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 934 DPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 934 dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
||.+||| +.++|+||||+.+....-
T Consensus 316 dP~~R~t----~~e~l~Hp~~~~~~~~~~ 340 (388)
T 3oz6_A 316 NPNKRIS----ANDALKHPFVSIFHNPNE 340 (388)
T ss_dssp SGGGSCC----HHHHTTSTTTTTTCCGGG
T ss_pred CcccCCC----HHHHhCCHHHHHhcCCcc
Confidence 9999999 999999999998755443
No 51
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.7e-43 Score=386.74 Aligned_cols=261 Identities=34% Similarity=0.558 Sum_probs=230.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
++..++|++++.||+|+||.||+|.+..++..||+|++.............+.+|+.+++.++||||+++++++...+..
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 84 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRV 84 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEE
Confidence 45678999999999999999999999999999999999765444444456788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....
T Consensus 85 ~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~- 161 (279)
T 3fdn_A 85 YLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPS- 161 (279)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCc-
Confidence 9999999999999999764 4599999999999999999999999999999999999999999999999998844221
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 213 (279)
T 3fdn_A 162 ----------------------------SRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ 213 (279)
T ss_dssp ----------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------ccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH
Confidence 1122456899999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.....+......++. ..+..+.+||.+||..||.+||| +.++++||||+...
T Consensus 214 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~e~l~h~~~~~~~ 265 (279)
T 3fdn_A 214 ETYKRISRVEFTFPD--FVTEGARDLISRLLKHNPSQRPM----LREVLEHPWITANS 265 (279)
T ss_dssp HHHHHHHHTCCCCCT--TSCHHHHHHHHHHCCSSGGGSCC----HHHHHHCHHHHHHC
T ss_pred HHHHHHHhCCCCCCC--cCCHHHHHHHHHHhccChhhCCC----HHHHhhCccccCCc
Confidence 888888877666654 36889999999999999999999 99999999998743
No 52
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8.6e-43 Score=410.96 Aligned_cols=302 Identities=23% Similarity=0.283 Sum_probs=211.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-----CC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-----KT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-----~~ 738 (998)
.++|++++.||+|+||.||+|.+..+++.||||++... .........+.+|+.+|+.++||||+++++++.. ..
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRV-FEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECST-TSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechh-hcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 47899999999999999999999999999999998754 3345566788999999999999999999999843 35
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||+|||++|||||||||+||||+.++.+||+|||+|+...
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~ 207 (458)
T 3rp9_A 131 ELYVVLEIA-DSDFKKLFRTP--VYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207 (458)
T ss_dssp CEEEEECCC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTT
T ss_pred eEEEEEecc-ccchhhhcccC--CCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhcc
Confidence 799999998 78999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh-cCCCCCChhHHHHHHHHHHHHHc--------
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY-------- 889 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~sDIwSlG~il~eLlt-------- 889 (998)
....................................+||+.|+|||++ .+..++.++|||||||++|+|++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~ 287 (458)
T 3rp9_A 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAY 287 (458)
T ss_dssp SCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSS
T ss_pred CccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccc
Confidence 222110000000000000000000000011234566899999999987 45679999999999999999998
Q ss_pred ---CCCCCCCCCh--------------------HHHHHHHHh--C--------------------CCCC-------CCCC
Q 001902 890 ---GYTPFRGKTR--------------------QKTFANILH--K--------------------DLKF-------PSST 917 (998)
Q Consensus 890 ---G~~Pf~~~~~--------------------~~~~~~i~~--~--------------------~~~~-------~~~~ 917 (998)
|.++|.+.+. ...+..+.. + .++. ....
T Consensus 288 ~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (458)
T 3rp9_A 288 HADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFP 367 (458)
T ss_dssp GGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGST
T ss_pred cccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCC
Confidence 7777866541 122222211 0 0000 0113
Q ss_pred CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCC
Q 001902 918 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 973 (998)
Q Consensus 918 ~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 973 (998)
..+.++.+||.+||..||.+||| +.++|+||||+.+.|...+.....+...|
T Consensus 368 ~~s~~~~dLl~~mL~~dP~~R~t----~~e~L~Hp~f~~~~~~~~e~~~~~~~~~~ 419 (458)
T 3rp9_A 368 ASSADAIHLLKRMLVFNPNKRIT----INECLAHPFFKEVRIAEVETNATEKVRLP 419 (458)
T ss_dssp TSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGTTTCCGGGCCCCSSCCCCS
T ss_pred CCCHHHHHHHHHHhccCccccCC----HHHHhcCHhhhhcCCCccCCCCCCCCCCC
Confidence 45889999999999999999999 99999999999999988755444444334
No 53
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1e-42 Score=397.15 Aligned_cols=257 Identities=30% Similarity=0.470 Sum_probs=215.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...++|++++.||+|+||.||+|.+..+++.||+|++...... ...+.+|+.+++.++||||+++++++...+.+|
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 92 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI----DENVQREIINHRSLRHPNIVRFKEVILTPTHLA 92 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS----CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc----cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEE
Confidence 3457899999999999999999999999999999999764322 245778999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc--EEEEeccCccccCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLSCLTSC 819 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~--vkL~DFG~a~~~~~ 819 (998)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++.....
T Consensus 93 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~ 170 (361)
T 3uc3_A 93 IIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVL 170 (361)
T ss_dssp EEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-----
T ss_pred EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccc
Confidence 999999999999999764 45999999999999999999999999999999999999987765 99999999853210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCCh-hHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA-VDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~-sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.......+||+.|+|||++.+..++.+ +|||||||++|+|++|..||.+..
T Consensus 171 ----------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 171 ----------------------------HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp --------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred ----------------------------cCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 011234579999999999988887765 899999999999999999998744
Q ss_pred h----HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 899 R----QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 899 ~----~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
. ...+..+......++....++..+.+||.+||..||.+||| +.++++||||..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~~ 280 (361)
T 3uc3_A 223 EPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS----IPEIKTHSWFLK 280 (361)
T ss_dssp -CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCC----HHHHHTSHHHHT
T ss_pred cHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcC----HHHHHhCcchhc
Confidence 3 45556666777777777778999999999999999999999 999999999965
No 54
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-43 Score=400.87 Aligned_cols=256 Identities=32% Similarity=0.516 Sum_probs=219.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.+...........+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 57899999999999999999999999999999999865443333445788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+ +|+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 88 ~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~--- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG--- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS---
T ss_pred EECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCC---
Confidence 9999 78999988764 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+......
T Consensus 162 -------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~ 216 (336)
T 3h4j_B 162 -------------------------NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216 (336)
T ss_dssp -------------------------BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC
T ss_pred -------------------------cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH
Confidence 11234579999999999988776 6799999999999999999999987654443
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
...+.......| ...+..+.+||.+||..||.+||| +.++++||||+.
T Consensus 217 ~~~i~~~~~~~p--~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~ 264 (336)
T 3h4j_B 217 FKKVNSCVYVMP--DFLSPGAQSLIRRMIVADPMQRIT----IQEIRRDPWFNV 264 (336)
T ss_dssp BCCCCSSCCCCC--TTSCHHHHHHHHTTSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred HHHHHcCCCCCc--ccCCHHHHHHHHHHcCCChhHCcC----HHHHHhChhhcc
Confidence 333333333333 346889999999999999999999 999999999986
No 55
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=5.4e-43 Score=393.31 Aligned_cols=261 Identities=26% Similarity=0.421 Sum_probs=220.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 83 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLF 83 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC---------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc--cchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 4789999999999999999999999999999999875422 22335678899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~-- 159 (323)
T 3tki_A 84 LEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN-- 159 (323)
T ss_dssp EECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT--
T ss_pred EEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCC--
Confidence 9999999999999764 459999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChH-H
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-K 901 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~ 901 (998)
........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... .
T Consensus 160 -----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~ 216 (323)
T 3tki_A 160 -----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQ 216 (323)
T ss_dssp -----------------------EECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSH
T ss_pred -----------------------cccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHH
Confidence 0112235679999999999988765 67899999999999999999999876553 3
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+.......+....++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~eil~h~~~~~~ 268 (323)
T 3tki_A 217 EYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred HHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcC----HHHHhhChhhccc
Confidence 444444444444445667899999999999999999999 9999999999874
No 56
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=8.4e-43 Score=381.97 Aligned_cols=256 Identities=31% Similarity=0.510 Sum_probs=207.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999999999999999999999876555555567888999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+ +++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 92 ~e~~-~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 165 (275)
T 2eue_A 92 IEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG--- 165 (275)
T ss_dssp EECC-CEEHHHHHHTS--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC---------
T ss_pred ehhc-CCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCc---
Confidence 9999 78888888764 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||.+.+....
T Consensus 166 -------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 220 (275)
T 2eue_A 166 -------------------------NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL 220 (275)
T ss_dssp ----------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred -------------------------ccccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 11223469999999999988765 6899999999999999999999999988888
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
...+......++. ..+..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 221 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dP~~Rps----~~e~l~h~~f~~ 268 (275)
T 2eue_A 221 FKNISNGVYTLPK--FLSPGAAGLIKRMLIVNPLNRIS----IHEIMQDDWFKV 268 (275)
T ss_dssp HHHHHHTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCHHHHT
T ss_pred HHHHHhCCCCCCc--cCCHHHHHHHHHHhhcCHhHCCC----HHHHhhCCeecc
Confidence 8888887766554 46889999999999999999999 999999999986
No 57
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-42 Score=397.29 Aligned_cols=260 Identities=28% Similarity=0.455 Sum_probs=228.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++++.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+++.++||||+++++++.....+|+|
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~---~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY---PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc---hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 468999999999999999999999999999999987542 33445788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec--CCcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG--NGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~--~g~vkL~DFG~a~~~~~~~ 821 (998)
||||+|++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++......
T Consensus 127 ~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~- 204 (387)
T 1kob_A 127 LEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD- 204 (387)
T ss_dssp EECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT-
T ss_pred EEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCC-
Confidence 9999999999999764 345999999999999999999999999999999999999984 478999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 205 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~ 257 (387)
T 1kob_A 205 ---------------------------EIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLE 257 (387)
T ss_dssp ---------------------------SCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHH
T ss_pred ---------------------------cceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHH
Confidence 11123469999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 902 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 902 ~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.+..+......++. ...++.++.+||.+||..||.+||| +.++|+||||++..+
T Consensus 258 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~~~~ 313 (387)
T 1kob_A 258 TLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT----VHDALEHPWLKGDHS 313 (387)
T ss_dssp HHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHTSTTTSSCCT
T ss_pred HHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhhCccccCCcc
Confidence 88888877655443 3457899999999999999999999 999999999998544
No 58
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-42 Score=379.16 Aligned_cols=265 Identities=28% Similarity=0.466 Sum_probs=233.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.++++++||||+++++++...+..|+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKL-SARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccC-CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 4789999999999999999999999999999999986543 444567788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc---EEEEeccCccccCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTSCK 820 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~---vkL~DFG~a~~~~~~ 820 (998)
|||+++++|.+.+... ..+++..+..++.||+.||.|||++||+||||||+||+++.++. +||+|||++......
T Consensus 84 ~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred EecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 9999999999888765 45999999999999999999999999999999999999987655 999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus 162 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 213 (284)
T 3kk8_A 162 ----------------------------EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH 213 (284)
T ss_dssp ----------------------------CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------ccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh
Confidence 1123457999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 901 KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
.....+......++. ....+.++.+||.+||..||.+||| +.++|+||||+..++....
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~~ 274 (284)
T 3kk8_A 214 RLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRIT----ADQALKVPWICNRERVASA 274 (284)
T ss_dssp HHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCC----HHHHTTSHHHHSCCCGGGS
T ss_pred HHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCC----HHHHhcCccccCChhHHhH
Confidence 888888877655543 3467899999999999999999999 9999999999997765553
No 59
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=5.3e-43 Score=398.09 Aligned_cols=266 Identities=26% Similarity=0.430 Sum_probs=225.2
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC--hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
+..+.|++.+.||+|+||.||+|.+..+|+.||+|++....... ......+.+|+.+++.++||||+++++++...+.
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 100 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGM 100 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence 33468999999999999999999999999999999997543221 1235678899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc---EEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~---vkL~DFG~a 814 (998)
+|+|||||+|++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 101 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 101 LYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 99999999999998887642 2345899999999999999999999999999999999999987654 999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
....... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 181 ~~~~~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (351)
T 3c0i_A 181 IQLGESG---------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233 (351)
T ss_dssp EECCTTS---------------------------CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eEecCCC---------------------------eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCC
Confidence 6543110 1123457999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 895 RGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.+. ....+..+......++. ...++..+.+||.+||..||.+||| +.++|+||||+..++
T Consensus 234 ~~~-~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s----~~e~l~hp~~~~~~~ 295 (351)
T 3c0i_A 234 YGT-KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERIT----VYEALNHPWLKERDR 295 (351)
T ss_dssp CSS-HHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTHHH
T ss_pred CCc-HHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcChhhcCCcc
Confidence 875 45566677766554432 2457889999999999999999999 999999999997543
No 60
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-42 Score=386.43 Aligned_cols=263 Identities=25% Similarity=0.392 Sum_probs=214.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhC---CCCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDML---DHPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~~ 736 (998)
+..++|++++.||+|+||.||+|.+..+++.||+|++...... .........+|+.+++.+ +||||+++++++..
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~ 85 (308)
T 3g33_A 6 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 85 (308)
T ss_dssp ----CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred ccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeec
Confidence 4467999999999999999999999999999999998753221 111123455677776666 59999999999976
Q ss_pred CC-----eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 737 KT-----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 737 ~~-----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
.. .+++||||++ ++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+||
T Consensus 86 ~~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Df 164 (308)
T 3g33_A 86 SRTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADF 164 (308)
T ss_dssp CCSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSC
T ss_pred cCCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeC
Confidence 54 6899999995 69999998876566999999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~ 891 (998)
|++...... ......+||+.|+|||++.+..++.++|||||||++|+|++|.
T Consensus 165 g~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~ 216 (308)
T 3g33_A 165 GLARIYSYQ----------------------------MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRK 216 (308)
T ss_dssp SCTTTSTTC----------------------------CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSS
T ss_pred ccccccCCC----------------------------cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCC
Confidence 998543211 1123457999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCC-----CCC--------------------CCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 892 TPFRGKTRQKTFANILHKDLK-----FPS--------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~-----~~~--------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
+||.+.+....+..+...... ++. ....+..+.+||.+||+.||.+||| +.
T Consensus 217 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ 292 (308)
T 3g33_A 217 PLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRIS----AF 292 (308)
T ss_dssp CSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCC----HH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCC----HH
Confidence 999999888887777642110 100 1246788999999999999999999 99
Q ss_pred HHHcCCCccCC
Q 001902 947 EIKKHPFFKGV 957 (998)
Q Consensus 947 elL~Hp~f~~~ 957 (998)
++|+||||+..
T Consensus 293 e~l~h~~~~~~ 303 (308)
T 3g33_A 293 RALQHSYLHKD 303 (308)
T ss_dssp HHHTSTTC---
T ss_pred HHhcCccccCC
Confidence 99999999974
No 61
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=7.7e-43 Score=399.90 Aligned_cols=260 Identities=27% Similarity=0.435 Sum_probs=222.0
Q ss_pred Cccc--ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 666 HFRP--IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 666 ~y~~--~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.|.+ .+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.++++++||||+++++++...+.+|||
T Consensus 88 ~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv 164 (373)
T 2x4f_A 88 FYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG---MKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLV 164 (373)
T ss_dssp TEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS---HHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc---cccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 3444 578999999999999999999999999998642 24456788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE--ecCCcEEEEeccCccccCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--QGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi--~~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 165 ~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~- 242 (373)
T 2x4f_A 165 MEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPR- 242 (373)
T ss_dssp EECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTT-
T ss_pred EeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCc-
Confidence 9999999999988764 2459999999999999999999999999999999999999 45678999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 243 ---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~ 295 (373)
T 2x4f_A 243 ---------------------------EKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE 295 (373)
T ss_dssp ---------------------------CBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred ---------------------------cccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11223469999999999999999999999999999999999999999999988
Q ss_pred HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 902 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 902 ~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
.+..+......++. ...++.++.+||.+||..||.+||| +.++|+||||+..++..
T Consensus 296 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps----~~e~l~hp~~~~~~~~~ 353 (373)
T 2x4f_A 296 TLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRIS----ASEALKHPWLSDHKLHS 353 (373)
T ss_dssp HHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHCHHHHH
T ss_pred HHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCC----HHHHhcCcCcCCCchhh
Confidence 88888887665543 2457899999999999999999999 99999999999977643
No 62
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.4e-43 Score=390.65 Aligned_cols=265 Identities=24% Similarity=0.396 Sum_probs=207.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 81 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLV 81 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCS--TTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccc--ccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEE
Confidence 358999999999999999999999999999999997543 222345677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhC----CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 744 TDYCPGGELFLLLDRQ----PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
|||++ ++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.....
T Consensus 82 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 82 FEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp EECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred EEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 99996 6999988653 123589999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+
T Consensus 161 ~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 213 (317)
T 2pmi_A 161 P---------------------------VNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN 213 (317)
T ss_dssp C---------------------------CCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred C---------------------------cccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1 111234578999999999977 468999999999999999999999999988
Q ss_pred hHHHHHHHHhCCCC------------------C--------------CCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 899 RQKTFANILHKDLK------------------F--------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 899 ~~~~~~~i~~~~~~------------------~--------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
....+..+...... . ......+.++.+||.+||+.||.+||| +.
T Consensus 214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ 289 (317)
T 2pmi_A 214 DEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLS----AK 289 (317)
T ss_dssp HHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCC----HH
T ss_pred hHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCC----HH
Confidence 87777766541000 0 001246788999999999999999999 99
Q ss_pred HHHcCCCccCCChhhh
Q 001902 947 EIKKHPFFKGVNWALV 962 (998)
Q Consensus 947 elL~Hp~f~~~~~~~~ 962 (998)
++|+||||+...+...
T Consensus 290 e~l~hp~f~~~~~~~~ 305 (317)
T 2pmi_A 290 QALHHPWFAEYYHHAS 305 (317)
T ss_dssp HHTTSGGGGGGCC---
T ss_pred HHhCChhhhcccchhh
Confidence 9999999998766544
No 63
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=9.4e-43 Score=410.29 Aligned_cols=261 Identities=28% Similarity=0.471 Sum_probs=231.3
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+..++|.+.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.+++.++||||+++++++...+.
T Consensus 11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~ 90 (476)
T 2y94_A 11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSD 90 (476)
T ss_dssp SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 34567899999999999999999999999999999999986544334456678899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~ 168 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKN--GRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 168 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSS--SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCT
T ss_pred EEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccc
Confidence 99999999999999999764 4599999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.+
T Consensus 169 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 169 G----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp T----------------------------CCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred c----------------------------ccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 1 11234579999999999988765 679999999999999999999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
....+..+..+....|. .++..+.+||.+||..||.+||| +.++++||||+.
T Consensus 221 ~~~~~~~i~~~~~~~p~--~~s~~~~~Li~~~L~~dP~~Rpt----~~eil~hp~~~~ 272 (476)
T 2y94_A 221 VPTLFKKICDGIFYTPQ--YLNPSVISLLKHMLQVDPMKRAT----IKDIREHEWFKQ 272 (476)
T ss_dssp SHHHHHHHHTTCCCCCT--TCCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHT
T ss_pred HHHHHHHHhcCCcCCCc--cCCHHHHHHHHHHcCCCchhCcC----HHHHHhCHHhhh
Confidence 88888888887655543 46889999999999999999999 999999999986
No 64
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.8e-42 Score=388.49 Aligned_cols=265 Identities=29% Similarity=0.445 Sum_probs=232.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+.|++.+.||+|+||.||+|.+..+|+.||+|++........ .....+.+|+.+++.++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 3579999999999999999999999999999999986533221 1356788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC----cEEEEeccCccc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 816 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g----~vkL~DFG~a~~ 816 (998)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++..
T Consensus 91 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~ 168 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHE 168 (321)
T ss_dssp EEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEE
T ss_pred EEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcccee
Confidence 9999999999999999764 4589999999999999999999999999999999999999887 799999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 169 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 220 (321)
T 2a2a_A 169 IEDG----------------------------VEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220 (321)
T ss_dssp CCTT----------------------------CCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCC
T ss_pred cCcc----------------------------ccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCC
Confidence 3211 112345699999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 897 KTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.+....+..+......++.. ...+..+.+||.+||..||.+||| +.++++||||+.+++...
T Consensus 221 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~hp~~~~~~~~~~ 284 (321)
T 2a2a_A 221 DTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLT----IQEALRHPWITPVDNQQA 284 (321)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCC----HHHHHHSTTTSCSSHHHH
T ss_pred CCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhcCccccCCCcccc
Confidence 98888888887766554432 456889999999999999999999 999999999999988655
No 65
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-42 Score=382.67 Aligned_cols=260 Identities=31% Similarity=0.544 Sum_probs=230.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 89 (284)
T 2vgo_A 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRI 89 (284)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEE
Confidence 35567999999999999999999999999999999999765433333456788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.....
T Consensus 90 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~- 166 (284)
T 2vgo_A 90 YLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPS- 166 (284)
T ss_dssp EEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSS-
T ss_pred EEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcc-
Confidence 9999999999999999765 3589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......|++.|+|||++.+..++.++|||||||++|+|++|..||...+..
T Consensus 167 ----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 218 (284)
T 2vgo_A 167 ----------------------------LRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT 218 (284)
T ss_dssp ----------------------------SCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred ----------------------------cccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh
Confidence 0122457999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.....+......++. ..+..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 219 ~~~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~h~~~~~~ 269 (284)
T 2vgo_A 219 ETHRRIVNVDLKFPP--FLSDGSKDLISKLLRYHPPQRLP----LKGVMEHPWVKAN 269 (284)
T ss_dssp HHHHHHHTTCCCCCT--TSCHHHHHHHHHHSCSSGGGSCC----HHHHHTCHHHHHH
T ss_pred HHHHHHhccccCCCC--cCCHHHHHHHHHHhhcCHhhCCC----HHHHhhCHHHHhh
Confidence 888888877666553 46889999999999999999999 9999999999863
No 66
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=8.5e-43 Score=392.73 Aligned_cols=264 Identities=22% Similarity=0.334 Sum_probs=214.2
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHE-EEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC---------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccccc-ccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 345789999999999999999999999999999999976532 2333456778999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-----cCCcEEEEeccCccc
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-----GNGHVSLTDFDLSCL 816 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-----~~g~vkL~DFG~a~~ 816 (998)
+||||++ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++..
T Consensus 110 lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~ 186 (329)
T 3gbz_A 110 LIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARA 186 (329)
T ss_dssp EEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHH
T ss_pred EEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccc
Confidence 9999996 5999999875 3499999999999999999999999999999999999995 455699999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
.... .......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.
T Consensus 187 ~~~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 239 (329)
T 3gbz_A 187 FGIP---------------------------IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239 (329)
T ss_dssp HC--------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred cCCc---------------------------ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 3211 1112344689999999999875 48999999999999999999999999
Q ss_pred CCChHHHHHHHHhCCCCC------------------CCC----------CCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 896 GKTRQKTFANILHKDLKF------------------PSS----------TPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~------------------~~~----------~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
+.+....+..+....... +.. ...+.++.+||.+||..||.+||| +.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e 315 (329)
T 3gbz_A 240 GDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRIS----AKN 315 (329)
T ss_dssp CSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCC----HHH
T ss_pred CCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCC----HHH
Confidence 988887777766421100 000 015678999999999999999999 999
Q ss_pred HHcCCCccCCChh
Q 001902 948 IKKHPFFKGVNWA 960 (998)
Q Consensus 948 lL~Hp~f~~~~~~ 960 (998)
+|+||||++.+|.
T Consensus 316 ~l~hp~f~~~~~~ 328 (329)
T 3gbz_A 316 ALEHPYFSHNDFD 328 (329)
T ss_dssp HHTSGGGSSSCSC
T ss_pred HhCCcccCCCCCC
Confidence 9999999999884
No 67
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=2.5e-42 Score=393.56 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=219.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----CCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----HPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-----h~nIv~l~~~~~ 735 (998)
.+..++|++++.||+|+||.||+|.+..+++.||+|++... .........|+.+++.+. ||||+++++++.
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~ 106 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI----KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFM 106 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc----hhhhhhhHHHHHHHHHhcccCCCCCCeecccceee
Confidence 34468999999999999999999999999999999998742 334456778999999996 999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-------------
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------- 802 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~------------- 802 (998)
..+..|+||||+ +++|.+++.......++...++.++.||+.||+|||++||+||||||+|||++.
T Consensus 107 ~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~ 185 (360)
T 3llt_A 107 YYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRV 185 (360)
T ss_dssp ETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECT
T ss_pred ECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcc
Confidence 999999999999 999999998876667999999999999999999999999999999999999975
Q ss_pred ------------CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC
Q 001902 803 ------------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG 870 (998)
Q Consensus 803 ------------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~ 870 (998)
++.+||+|||++.... .......||+.|+|||++.+..
T Consensus 186 ~~~~~~~~~~~~~~~~kl~DFG~a~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 186 TDGKKIQIYRTKSTGIKLIDFGCATFKS------------------------------DYHGSIINTRQYRAPEVILNLG 235 (360)
T ss_dssp TTCCEEEEEEESCCCEEECCCTTCEETT------------------------------SCCCSCCSCGGGCCHHHHTTCC
T ss_pred cccccccccccCCCCEEEEeccCceecC------------------------------CCCcCccCcccccCcHHHcCCC
Confidence 7899999999985422 1123457999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC--------------------------CCC-------
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP--------------------------SST------- 917 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~--------------------------~~~------- 917 (998)
++.++|||||||++|+|++|+.||.+.+....+..+.....+.| ...
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 315 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIK 315 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHH
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhh
Confidence 99999999999999999999999999887777666554322222 110
Q ss_pred -----------CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 918 -----------PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 918 -----------~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
..+..+.+||.+||+.||.+||| +.++|+||||+
T Consensus 316 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----a~elL~hp~f~ 360 (360)
T 3llt_A 316 HVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPS----PAELLKHKFLE 360 (360)
T ss_dssp HHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGC
T ss_pred hhhhcccccccchHHHHHHHHHHHhcCChhhCCC----HHHHhcCcccC
Confidence 11356779999999999999999 99999999996
No 68
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=3.7e-42 Score=390.58 Aligned_cols=256 Identities=26% Similarity=0.372 Sum_probs=225.6
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
..|++++.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++...+..|+||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45999999999999999999999999999999998654444555678889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+. |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 134 e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~------ 205 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMA------ 205 (348)
T ss_dssp ECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSS------
T ss_pred ecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecC------
Confidence 9995 6888887643 2459999999999999999999999999999999999999999999999999985432
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.....+||+.|+|||++. ...++.++|||||||++|+|++|..||.+.+...
T Consensus 206 -------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 260 (348)
T 1u5q_A 206 -------------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS 260 (348)
T ss_dssp -------------------------SBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred -------------------------CCCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112357999999999985 5678899999999999999999999999988888
Q ss_pred HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+.....+.......+..+.+||.+||..||.+||| +.++++||||...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 261 ALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPT----SEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTCHHHHSC
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcC----HHHHhhChhhhcc
Confidence 887777766555555567899999999999999999999 9999999999764
No 69
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=1.4e-42 Score=401.48 Aligned_cols=254 Identities=25% Similarity=0.436 Sum_probs=209.6
Q ss_pred cCCcccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCccceeEEEee----C
Q 001902 664 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 737 (998)
Q Consensus 664 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il-~~l~h~nIv~l~~~~~~----~ 737 (998)
.++|.+. +.||+|+||.||+|.+..+|+.||||++... ..+.+|+.++ +..+||||++++++|.. .
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~--------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~ 131 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 131 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc--------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCC
Confidence 4678887 6899999999999999999999999998643 3456788887 45589999999999875 6
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 814 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a 814 (998)
.++|||||||+||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 132 ~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred cEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccc
Confidence 78999999999999999998765556999999999999999999999999999999999999997 789999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
...... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 212 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 263 (400)
T 1nxk_A 212 KETTSH----------------------------NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263 (400)
T ss_dssp EECC---------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccCCC----------------------------CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCC
Confidence 643211 1123457999999999999999999999999999999999999999
Q ss_pred CCCChHH----HHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 895 RGKTRQK----TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 895 ~~~~~~~----~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+.+... ....+..+...++ ....++.++.+||.+||..||.+||| +.++++||||...
T Consensus 264 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~eil~hp~~~~~ 328 (400)
T 1nxk_A 264 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQS 328 (400)
T ss_dssp CCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSHHHHTT
T ss_pred CCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccCC
Confidence 8765322 3445555555444 34568899999999999999999999 9999999999863
No 70
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=1.5e-42 Score=382.80 Aligned_cols=258 Identities=24% Similarity=0.406 Sum_probs=213.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+ .+|+.||+|++..... .......+.+|+.+++.++||||+++++++...+.+|+||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKE-DEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF 79 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSG-GGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEecccc-ccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence 5899999999999999999999 6799999999975432 2223456778999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++ ++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 153 (288)
T 1ob3_A 80 EHLD-QDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP---- 153 (288)
T ss_dssp ECCS-EEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred EecC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcc----
Confidence 9995 59999887643 45999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+....+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (288)
T 1ob3_A 154 -----------------------VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210 (288)
T ss_dssp -------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 0112234689999999999764 5899999999999999999999999998887777
Q ss_pred HHHHhC--CCC---CC----------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 904 ANILHK--DLK---FP----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 904 ~~i~~~--~~~---~~----------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
..+... ... ++ .....+..+.+||.+||..||.+||| +.++|+||||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~ 286 (288)
T 1ob3_A 211 MRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT----AKQALEHAYFKE 286 (288)
T ss_dssp HHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC----HHHHhcCcchhh
Confidence 666541 000 00 01236788999999999999999999 999999999986
Q ss_pred C
Q 001902 957 V 957 (998)
Q Consensus 957 ~ 957 (998)
.
T Consensus 287 ~ 287 (288)
T 1ob3_A 287 N 287 (288)
T ss_dssp -
T ss_pred c
Confidence 4
No 71
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=3.6e-42 Score=390.88 Aligned_cols=258 Identities=32% Similarity=0.497 Sum_probs=210.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...+.|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.++++++||||+++++++...+.+|
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 124 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-----DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEIS 124 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC---------------CHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-----hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEE
Confidence 33578999999999999999999999999999999987542 2356778999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a~~~~ 818 (998)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 125 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 125 LVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp EEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 999999999999999764 45999999999999999999999999999999999999975 8899999999985432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .......||+.|+|||++.+..++.++|||||||++|+|++|..||....
T Consensus 203 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 254 (349)
T 2w4o_A 203 HQ----------------------------VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDER 254 (349)
T ss_dssp --------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTT
T ss_pred cc----------------------------cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCc
Confidence 10 11234579999999999999999999999999999999999999998766
Q ss_pred hHH-HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 899 RQK-TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 899 ~~~-~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
... .+..+......++. ....+..+.+||.+||..||.+||| +.++|+||||++..
T Consensus 255 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 255 GDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLT----TFQALQHPWVTGKA 313 (349)
T ss_dssp CHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC----HHHHHHSTTTTSTT
T ss_pred ccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcC----HHHHhcCcccCCCc
Confidence 544 55666665544432 3567889999999999999999999 99999999999754
No 72
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.4e-43 Score=396.36 Aligned_cols=257 Identities=30% Similarity=0.475 Sum_probs=220.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
.++|++++.||+|+||.||+|.++.+|+.||+|++.+... ...+|+.++.++ +||||+++++++.+.+.+|+
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-------~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-------DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-------CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-------ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 4679999999999999999999999999999999986532 234578888887 79999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC----CcEEEEeccCccccC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCLTS 818 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~----g~vkL~DFG~a~~~~ 818 (998)
|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+..+ +.+||+|||++....
T Consensus 94 v~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 94 VTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp EECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 99999999999999765 459999999999999999999999999999999999998543 359999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC--
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG-- 896 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~-- 896 (998)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 172 ~~~---------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 224 (342)
T 2qr7_A 172 AEN---------------------------GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224 (342)
T ss_dssp CTT---------------------------CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSST
T ss_pred CCC---------------------------CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCC
Confidence 111 112345799999999999888889999999999999999999999986
Q ss_pred -CChHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 897 -KTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 897 -~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.+....+..+..+...++. ...++..+.+||.+||..||.+||| +.++++||||.. |..+
T Consensus 225 ~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t----~~~il~hp~~~~--~~~~ 287 (342)
T 2qr7_A 225 DDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLT----AALVLRHPWIVH--WDQL 287 (342)
T ss_dssp TSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHT--GGGS
T ss_pred cCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCCeecC--cccc
Confidence 3556677777777766553 3467899999999999999999999 999999999965 5544
No 73
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=2.2e-42 Score=407.31 Aligned_cols=256 Identities=24% Similarity=0.439 Sum_probs=212.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++... .........+.+|+.+++.++||||+++++++...
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG-GGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc-ccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 57899999999999999999999999999999999865 33455567888999999999999999999999654
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+||||||++ ++|.+.+.. .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...
T Consensus 140 ~~~~lv~E~~~-~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~ 214 (464)
T 3ttj_A 140 QDVYLVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 214 (464)
T ss_dssp CEEEEEEECCS-EEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC---
T ss_pred CeEEEEEeCCC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeec
Confidence 46899999995 457666643 3899999999999999999999999999999999999999999999999999543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|++||.+.
T Consensus 215 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~ 266 (464)
T 3ttj_A 215 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGR 266 (464)
T ss_dssp --C----------------------------CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCC----------------------------cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 211 1223468999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhCCCC-------------------CCCCCC---------------------CcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILHKDLK-------------------FPSSTP---------------------TSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~-------------------~~~~~~---------------------~s~~l~~Ll~~~L~~dP~~ 937 (998)
+....+..++..... .+.... .+.++.+||.+||..||.+
T Consensus 267 ~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~ 346 (464)
T 3ttj_A 267 DYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAK 346 (464)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTT
T ss_pred CHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhh
Confidence 888777776542100 000000 0457899999999999999
Q ss_pred cCCChhcHHHHHcCCCccCC
Q 001902 938 RLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~~ 957 (998)
||| +.++|+||||+..
T Consensus 347 R~t----a~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 347 RIS----VDDALQHPYINVW 362 (464)
T ss_dssp SCC----HHHHHTSTTTGGG
T ss_pred CCC----HHHHhcChhhhhc
Confidence 999 9999999999963
No 74
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=383.96 Aligned_cols=264 Identities=27% Similarity=0.405 Sum_probs=217.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.++++++||||+++++++...+..++|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESE-DDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLV 80 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCC-C-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccc-cchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEE
Confidence 468999999999999999999999999999999987642 3344556778999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 81 ~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 155 (311)
T 4agu_A 81 FEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--- 155 (311)
T ss_dssp EECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCc---
Confidence 9999999999988764 45999999999999999999999999999999999999999999999999998653311
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....
T Consensus 156 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 211 (311)
T 4agu_A 156 ------------------------SDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ 211 (311)
T ss_dssp ----------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 111234478999999999976 6679999999999999999999999999887766
Q ss_pred HHHHHhC-------------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 903 FANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 903 ~~~i~~~-------------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
...+... ....+. ....+..+.+||.+||+.||.+||| +.++|+|||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~ 287 (311)
T 4agu_A 212 LYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLT----CEQLLHHPY 287 (311)
T ss_dssp HHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCC----HHHHHTSGG
T ss_pred HHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCC----HHHHhcChH
Confidence 6554321 111111 1346778999999999999999999 999999999
Q ss_pred ccCCChhh
Q 001902 954 FKGVNWAL 961 (998)
Q Consensus 954 f~~~~~~~ 961 (998)
|+++.+..
T Consensus 288 f~~~~~~~ 295 (311)
T 4agu_A 288 FENIREIE 295 (311)
T ss_dssp GTTCC---
T ss_pred HHhccCHH
Confidence 99987653
No 75
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=4.4e-42 Score=386.52 Aligned_cols=266 Identities=27% Similarity=0.433 Sum_probs=230.0
Q ss_pred CCcccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 665 QHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 665 ~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
+.|.+. +.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..+ .||||+++++++...+.+|+
T Consensus 28 ~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~l 106 (327)
T 3lm5_A 28 NFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR-GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIIL 106 (327)
T ss_dssp HHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET-TEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEE
Confidence 567777 889999999999999999999999999986532 233456788899999999 56999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCccccCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a~~~~~ 819 (998)
||||+++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++. ++.+||+|||++.....
T Consensus 107 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 107 ILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp EEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred EEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 999999999999997665567999999999999999999999999999999999999997 78999999999865421
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 187 ~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 238 (327)
T 3lm5_A 187 A----------------------------CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDN 238 (327)
T ss_dssp -----------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------cccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 1 112235799999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhh
Q 001902 900 QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
...+..+......++. ...++..+.+||.+||..||.+||| +.++|+||||+..+|..+.
T Consensus 239 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~ll~h~~~~~~~~~~~~ 300 (327)
T 3lm5_A 239 QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT----AEICLSHSWLQQWDFENLF 300 (327)
T ss_dssp HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTCGGGCCCCTTCC-
T ss_pred hHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcC----HHHHhCCHhhccccccccc
Confidence 8888888776554443 3467889999999999999999999 9999999999999998763
No 76
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3e-42 Score=392.46 Aligned_cols=285 Identities=41% Similarity=0.728 Sum_probs=229.6
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhC-CCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVML-NRNKVHRACAEREILDML-DHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~-~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~ 735 (998)
.+..++|++++.||+|+||.||+|.+. .+++.||+|++++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 129 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ 129 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe
Confidence 445679999999999999999999984 58999999999764321 122334566799999999 7999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
..+.+|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 130 ~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 130 TETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp ETTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eCceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 999999999999999999999764 359999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
..... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 208 ~~~~~--------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 208 EFVAD--------------------------ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp ECCGG--------------------------GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred ecccC--------------------------CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 43211 0111234579999999999986 3478899999999999999999999
Q ss_pred CCCCC----hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCCh-hcHHHHHcCCCccCCChhhhhcCCCC
Q 001902 894 FRGKT----RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSH-EGANEIKKHPFFKGVNWALVRCMNPP 968 (998)
Q Consensus 894 f~~~~----~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~-~~a~elL~Hp~f~~~~~~~~~~~~~~ 968 (998)
|.... .......+......++ ..++..+.+||.+||..||.+||++. +.+.++++||||+.++|..+.....|
T Consensus 262 f~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~~~~l~~~~~~ 339 (355)
T 1vzo_A 262 FTVDGEKNSQAEISRRILKSEPPYP--QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVP 339 (355)
T ss_dssp TSCTTSCCCHHHHHHHHHHCCCCCC--TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCCHHHHHTTCSC
T ss_pred CccCCccchHHHHHHHHhccCCCCC--cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCChhHhhhccCC
Confidence 97532 3444455555544444 34688999999999999999999221 12999999999999999988655544
Q ss_pred CCCCCCC
Q 001902 969 ELDAPLF 975 (998)
Q Consensus 969 ~~~~p~~ 975 (998)
....|.+
T Consensus 340 ~p~~p~~ 346 (355)
T 1vzo_A 340 APFKPVI 346 (355)
T ss_dssp CSCCCCC
T ss_pred CCCCCcc
Confidence 4444544
No 77
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.8e-42 Score=392.14 Aligned_cols=270 Identities=29% Similarity=0.448 Sum_probs=225.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc--ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML--NRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~--~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.+.... .......+.+|+.+++.++||||+++++++...+..|
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 36899999999999999999999999999999999765322 2345678889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhC--------------------------------------CCCCCCHHHHHHHHHHHHHHHHHH
Q 001902 742 LITDYCPGGELFLLLDRQ--------------------------------------PTKVLKEDAVRFYAAEVVVALEYL 783 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~--------------------------------------~~~~l~~~~~~~i~~qil~aL~~L 783 (998)
+|||||+|++|.+++... ....+++..++.++.||+.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 999999999999998521 012246788899999999999999
Q ss_pred HHCCceeccCCCCcEEEecCC--cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcc
Q 001902 784 HCQGIIYRDLKPENVLLQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYI 861 (998)
Q Consensus 784 H~~~IiHrDLkP~NILi~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~ 861 (998)
|++||+||||||+|||++.++ .+||+|||++......... .........||+.|+
T Consensus 185 H~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~ 241 (345)
T 3hko_A 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG-----------------------EYYGMTTKAGTPYFV 241 (345)
T ss_dssp HHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC-------------------------------CCCGGGC
T ss_pred HHCCccccCCChhhEEEecCCCceEEEeeccccccccccCcc-----------------------ccccccccCCCcccc
Confidence 999999999999999998776 8999999998654211100 011223457999999
Q ss_pred cchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccC
Q 001902 862 APEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 862 aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
|||++.+ ..++.++|||||||++|+|++|..||.+.+.......+......++.. ...+..+.+||.+||..||.+
T Consensus 242 aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~ 321 (345)
T 3hko_A 242 APEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDE 321 (345)
T ss_dssp CHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTT
T ss_pred CchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhH
Confidence 9999975 678899999999999999999999999999988888888876655433 347889999999999999999
Q ss_pred cCCChhcHHHHHcCCCccCCChh
Q 001902 938 RLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
||+ +.++|+||||+.+.+.
T Consensus 322 Rps----~~~~l~hp~~~~~~~~ 340 (345)
T 3hko_A 322 RFD----AMRALQHPWISQFSDK 340 (345)
T ss_dssp SCC----HHHHHHSHHHHTTSSC
T ss_pred CCC----HHHHhcChhhccChHh
Confidence 999 9999999999987653
No 78
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.3e-41 Score=397.59 Aligned_cols=296 Identities=22% Similarity=0.331 Sum_probs=219.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~ 738 (998)
.++|++++.||+|+||.||+|.+..+++.||||++... .........+.+|+.+|+.++||||+++++++... +
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~-~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRM-FEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECST-TTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCch-hcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 47899999999999999999999999999999999754 33455667889999999999999999999999766 6
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|+||||+ +++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++....
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~--~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~ 180 (432)
T 3n9x_A 104 ELYIVLEIA-DSDLKKLFKTP--IFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180 (432)
T ss_dssp CEEEEEECC-SEEHHHHHHSS--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-
T ss_pred eEEEEEecC-CcCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccc
Confidence 799999999 56999999764 459999999999999999999999999999999999999999999999999997654
Q ss_pred CCCCCCCCcchhhhhcccCCCCccc-ccccccccccccCCCCcccchhh-cCCCCCChhHHHHHHHHHHHHHc-------
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVF-MAEPMRASNSFVGTEEYIAPEII-AGAGHTSAVDWWALGILLYEMLY------- 889 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~gt~~y~aPE~l-~~~~~~~~sDIwSlG~il~eLlt------- 889 (998)
............ ....+.. ...........+||+.|+|||++ ....++.++|||||||++|+|++
T Consensus 181 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~ 254 (432)
T 3n9x_A 181 SEKDTNIVNDLE------ENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHIN 254 (432)
T ss_dssp ------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCS
T ss_pred cccccccccccc------ccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccc
Confidence 221110000000 0000000 00001123567899999999986 55679999999999999999998
Q ss_pred ----CCCCCCCCC-----------------hHHHHHHHHh------------------------CCCCCCC-----CCCC
Q 001902 890 ----GYTPFRGKT-----------------RQKTFANILH------------------------KDLKFPS-----STPT 919 (998)
Q Consensus 890 ----G~~Pf~~~~-----------------~~~~~~~i~~------------------------~~~~~~~-----~~~~ 919 (998)
|.++|.+.+ ....+..+.. .....+. ....
T Consensus 255 ~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (432)
T 3n9x_A 255 DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSI 334 (432)
T ss_dssp SGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTS
T ss_pred ccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCC
Confidence 444554433 1122222211 0111110 1346
Q ss_pred cHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCCC
Q 001902 920 SLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDAP 973 (998)
Q Consensus 920 s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~p 973 (998)
+.++.+||.+||..||.+||| +.++|+||||+.+.|...+...+++...|
T Consensus 335 s~~~~dLl~~mL~~dP~~R~t----a~e~L~Hp~f~~~~~~~~e~~~~~~~~~~ 384 (432)
T 3n9x_A 335 SDDGINLLESMLKFNPNKRIT----IDQALDHPYLKDVRKKKLENFSTKKIILP 384 (432)
T ss_dssp CHHHHHHHHHHSCSSTTTSCC----HHHHHTCGGGTTTCCTTTC---CCCCCCS
T ss_pred CHHHHHHHHHHhcCCcccCCC----HHHHhcChhhhhccCcccCcCCCCCCCCC
Confidence 889999999999999999999 99999999999999988765444444333
No 79
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=9.6e-42 Score=382.81 Aligned_cols=256 Identities=29% Similarity=0.467 Sum_probs=223.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEe
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITD 745 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E 745 (998)
.|...+.||+|+||.||+|.+..+|+.||+|++.... ......+.+|+.+++.++||||+++++++...+..|+|||
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 122 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK---QQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLME 122 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc---hhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEe
Confidence 4777789999999999999999899999999997543 2334667889999999999999999999999999999999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCC
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLL 825 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~ 825 (998)
|+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 123 ~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 194 (321)
T 2c30_A 123 FLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKD----- 194 (321)
T ss_dssp CCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSS-----
T ss_pred cCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccC-----
Confidence 9999999999865 34999999999999999999999999999999999999999999999999998553311
Q ss_pred CcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHH
Q 001902 826 PTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFAN 905 (998)
Q Consensus 826 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~ 905 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....+..
T Consensus 195 ----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~ 252 (321)
T 2c30_A 195 ----------------------VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR 252 (321)
T ss_dssp ----------------------SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred ----------------------ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence 0112345799999999999999999999999999999999999999999888877777
Q ss_pred HHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 906 ILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 906 i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
+.....+ +......+..+.+||.+||..||.+||| +.++++||||+...
T Consensus 253 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~ 302 (321)
T 2c30_A 253 LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT----AQELLDHPFLLQTG 302 (321)
T ss_dssp HHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGGGCC
T ss_pred HhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhccCC
Confidence 7665432 2333457889999999999999999999 99999999998754
No 80
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7e-42 Score=382.37 Aligned_cols=268 Identities=29% Similarity=0.455 Sum_probs=214.9
Q ss_pred cCCcccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEE
Q 001902 664 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 664 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~ 741 (998)
.+.|++. +.||+|+||.||+|.+..+++.||+|++.... ......+.+|+.++.++ +||||+++++++...+.+|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~ 87 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP---GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFY 87 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS---SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc---chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEE
Confidence 4678885 78999999999999999999999999997642 23356788899999985 7999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc---EEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~---vkL~DFG~a~~~~ 818 (998)
+||||+++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||++....
T Consensus 88 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~ 165 (316)
T 2ac3_A 88 LVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK 165 (316)
T ss_dssp EEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---
T ss_pred EEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccc
Confidence 999999999999999775 45999999999999999999999999999999999999998775 9999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----CCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----AGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
...... ..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 166 ~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~p 225 (316)
T 2ac3_A 166 LNGDCS--------------------PISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225 (316)
T ss_dssp ------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCS
T ss_pred cCCccc--------------------cccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCC
Confidence 111000 000111234579999999999975 4578899999999999999999999
Q ss_pred CCCCCh---------------HHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 894 FRGKTR---------------QKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 894 f~~~~~---------------~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
|.+... ...+..+......++.. ...+..+.+||.+||..||.+||| +.++|+||||++
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~ 301 (316)
T 2ac3_A 226 FVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLS----AAQVLQHPWVQG 301 (316)
T ss_dssp CCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSTTCC-
T ss_pred CcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCC----HHHHhcChhhcC
Confidence 987542 33455666666655532 457889999999999999999999 999999999998
Q ss_pred CChh
Q 001902 957 VNWA 960 (998)
Q Consensus 957 ~~~~ 960 (998)
..+.
T Consensus 302 ~~~~ 305 (316)
T 2ac3_A 302 CAPE 305 (316)
T ss_dssp ----
T ss_pred CCCc
Confidence 6553
No 81
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=5.3e-42 Score=391.96 Aligned_cols=258 Identities=32% Similarity=0.532 Sum_probs=223.7
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-C----hhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-N----RNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-~----~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
++|++.+.||+|+||.||+|.+..+|+.||||++...... . ......+.+|+.+++.+ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 5799999999999999999999989999999999764321 1 12245678899999999 8999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||++|++|.+++... ..+++..++.++.||+.||.|||+.||+|+||||+|||++.+|.+||+|||++....
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~ 251 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE 251 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccC
Confidence 999999999999999999764 459999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC------CCCCChhHHHHHHHHHHHHHcCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG------AGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~------~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
.. ......+||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 252 ~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~ 303 (365)
T 2y7j_A 252 PG----------------------------EKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303 (365)
T ss_dssp TT----------------------------CCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred CC----------------------------cccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCC
Confidence 11 11234579999999999863 357889999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 893 PFRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
||.+.+....+..+......++. ....+..+.+||.+||..||.+||| +.++|+||||+.
T Consensus 304 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~f~r 365 (365)
T 2y7j_A 304 PFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLT----AEQALQHPFFER 365 (365)
T ss_dssp SSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCC
T ss_pred CCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCcccCC
Confidence 99998888888888777655432 2457888999999999999999999 999999999974
No 82
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.5e-42 Score=411.88 Aligned_cols=263 Identities=29% Similarity=0.456 Sum_probs=232.0
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||+|+||.||+|.+..+|+.||+|++.+...........+.+|+.++++++||||+++++++...+.+|
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 33468999999999999999999999999999999998765544556678899999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~ 818 (998)
+|||||.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++....
T Consensus 103 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 103 LVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 999999999999999765 459999999999999999999999999999999999999 467899999999985532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. ......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+
T Consensus 181 ~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~ 231 (484)
T 3nyv_A 181 AS----------------------------KKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGAN 231 (484)
T ss_dssp CC----------------------------CSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred cc----------------------------cccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCC
Confidence 11 11233479999999999977 68999999999999999999999999999
Q ss_pred hHHHHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 899 RQKTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
....+..+..+...++ ....++..+++||.+||..||.+||| +.++|+||||+...+
T Consensus 232 ~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~h~~~~~~~~ 290 (484)
T 3nyv_A 232 EYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRIS----ARDALDHEWIQTYTK 290 (484)
T ss_dssp HHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcC----HHHHhhChhhccccc
Confidence 9999999888765543 34567899999999999999999999 999999999987543
No 83
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.8e-42 Score=378.21 Aligned_cols=260 Identities=31% Similarity=0.538 Sum_probs=200.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++...+..|+|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35899999999999999999999999999999999765433334457788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-- 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH-- 166 (278)
T ss_dssp EECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC--
Confidence 9999999999999764 3569999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......||+.|+|||.+.+..++.++|||||||++|+|++|..||........+
T Consensus 167 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 221 (278)
T 3cok_A 167 -------------------------EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221 (278)
T ss_dssp --------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---
T ss_pred -------------------------CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH
Confidence 1122356899999999999988999999999999999999999999887665555
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..+.......+ ...+.++.+||.+||..||.+||+ +.++++||||+..
T Consensus 222 ~~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~ 269 (278)
T 3cok_A 222 NKVVLADYEMP--SFLSIEAKDLIHQLLRRNPADRLS----LSSVLDHPFMSRN 269 (278)
T ss_dssp --CCSSCCCCC--TTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSTTTC--
T ss_pred HHHhhcccCCc--cccCHHHHHHHHHHcccCHhhCCC----HHHHhcCccccCC
Confidence 55544443333 346889999999999999999999 9999999999874
No 84
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.1e-42 Score=390.67 Aligned_cols=260 Identities=28% Similarity=0.426 Sum_probs=214.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF-QSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 478999999999999999999999999999999986542 3445567788999999999999999999999765
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 3569999999 8999999976 34899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 179 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 228 (367)
T 1cm8_A 179 DS------------------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG 228 (367)
T ss_dssp CS------------------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cc------------------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1234578999999999987 6789999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCC-----------------------C------CCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDLKF-----------------------P------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~-----------------------~------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+....... + .....+..+.+||.+||..||.+||| +.+
T Consensus 229 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t----~~e 304 (367)
T 1cm8_A 229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVT----AGE 304 (367)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCC----HHH
T ss_pred CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCC----HHH
Confidence 88877777665421100 0 11345789999999999999999999 999
Q ss_pred HHcCCCccCCChhhh
Q 001902 948 IKKHPFFKGVNWALV 962 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~ 962 (998)
+|+||||+.+.....
T Consensus 305 ~l~hp~f~~~~~~~~ 319 (367)
T 1cm8_A 305 ALAHPYFESLHDTED 319 (367)
T ss_dssp HHHSGGGTTTC----
T ss_pred HhcChHHHhhcCCcc
Confidence 999999998766543
No 85
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=389.14 Aligned_cols=263 Identities=24% Similarity=0.397 Sum_probs=214.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 79 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE--EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVF 79 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc--cccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence 589999999999999999999999999999999875421 111123446999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 80 e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~---- 153 (324)
T 3mtl_A 80 EYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP---- 153 (324)
T ss_dssp ECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred cccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCC----
Confidence 9995 6999988765 345999999999999999999999999999999999999999999999999998543211
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+....+
T Consensus 154 -----------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~ 210 (324)
T 3mtl_A 154 -----------------------TKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 210 (324)
T ss_dssp --------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred -----------------------ccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 111234468999999999977 56899999999999999999999999998887777
Q ss_pred HHHHhCCCC-----CC-----------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 904 ANILHKDLK-----FP-----------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 904 ~~i~~~~~~-----~~-----------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
..+...... ++ ....++..+.+||.+||..||.+||| +.++|+||||+
T Consensus 211 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~ 286 (324)
T 3mtl_A 211 HFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRIS----AEDAMKHPFFL 286 (324)
T ss_dssp HHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCC----HHHHTTSGGGG
T ss_pred HHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCC----HHHHhcChhhh
Confidence 766542110 00 01235778999999999999999999 99999999999
Q ss_pred CCChhhh
Q 001902 956 GVNWALV 962 (998)
Q Consensus 956 ~~~~~~~ 962 (998)
.+.....
T Consensus 287 ~~~~~~~ 293 (324)
T 3mtl_A 287 SLGERIH 293 (324)
T ss_dssp GGCSTTS
T ss_pred hcccccc
Confidence 8755443
No 86
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=2e-41 Score=375.14 Aligned_cols=267 Identities=30% Similarity=0.443 Sum_probs=227.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc------ChhHHHHHHHHHHHHHhCC-CCCccceeEEEee
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML------NRNKVHRACAEREILDMLD-HPFVPALYASFQT 736 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~------~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~ 736 (998)
.++|++.+.||+|+||.||+|.+..+|+.||+|++...... .......+.+|+.+++++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 57899999999999999999999999999999999754211 1233566788999999995 9999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++..
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 173 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 173 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred CCeEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhh
Confidence 99999999999999999999764 4599999999999999999999999999999999999999999999999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc------CCCCCChhHHHHHHHHHHHHHcC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA------GAGHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~------~~~~~~~sDIwSlG~il~eLltG 890 (998)
.... .......|++.|+|||++. ...++.++|||||||++|+|++|
T Consensus 174 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g 225 (298)
T 1phk_A 174 LDPG----------------------------EKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG 225 (298)
T ss_dssp CCTT----------------------------CCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred cCCC----------------------------cccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHC
Confidence 3211 1123456899999999985 45678899999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhc
Q 001902 891 YTPFRGKTRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 891 ~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
..||.+.+.......+......++.. ...+..+.+||.+||..||.+||| +.++++||||+...+..++.
T Consensus 226 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~~~~ 297 (298)
T 1phk_A 226 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT----AEEALAHPFFQQYVVEEVRH 297 (298)
T ss_dssp SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCC----HHHHTTSGGGCTTC------
T ss_pred CCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCC----HHHHHhChHhhhccchhhcc
Confidence 99999988888888888776655433 457889999999999999999999 99999999999988876653
No 87
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-41 Score=375.19 Aligned_cols=257 Identities=30% Similarity=0.514 Sum_probs=219.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+.+.||+|+||.||+|.+..++..+|+|++.... .......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDR--SQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG--CCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccc--cchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 57999999999999999999999999999999998653 2234567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccCC
Q 001902 745 DYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 745 E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~~ 819 (998)
||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~ 179 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS 179 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCC
Confidence 999999999988542 23569999999999999999999999999999999999999 4568899999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
. .......||+.|+|||++. ..++.++|||||||++|+|++|..||.+.+.
T Consensus 180 ~----------------------------~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~ 230 (285)
T 3is5_A 180 D----------------------------EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSL 230 (285)
T ss_dssp -----------------------------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred c----------------------------ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCH
Confidence 1 1123456999999999986 4678999999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCC-CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 900 QKTFANILHKDLKFPS-STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~-~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
......+......++. ....+..+.+||.+||..||.+||| +.++|+||||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~f~~ 284 (285)
T 3is5_A 231 EEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPS----AAQVLHHEWFKQ 284 (285)
T ss_dssp HHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCC----HHHHHTSGGGGC
T ss_pred HHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHhhc
Confidence 7777777665544433 2447889999999999999999999 999999999986
No 88
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7e-42 Score=374.86 Aligned_cols=254 Identities=30% Similarity=0.530 Sum_probs=225.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++.+.||+|+||.||+|.+..++..+|+|.+..... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVM 85 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC---SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc---chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEE
Confidence 579999999999999999999999999999999986533 23467888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~~~~ 821 (998)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++......
T Consensus 86 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~- 162 (277)
T 3f3z_A 86 ELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG- 162 (277)
T ss_dssp ECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT-
T ss_pred eccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc-
Confidence 999999999998764 458999999999999999999999999999999999999 77899999999998553211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+...
T Consensus 163 ---------------------------~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 214 (277)
T 3f3z_A 163 ---------------------------KMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE 214 (277)
T ss_dssp ---------------------------SCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------cchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH
Confidence 112345699999999998765 8899999999999999999999999999888
Q ss_pred HHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 902 TFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 902 ~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
....+......++.. ...+..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~~~l~h~~~~~ 267 (277)
T 3f3z_A 215 VMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRIT----SLQALEHEWFEK 267 (277)
T ss_dssp HHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHTTSHHHHH
T ss_pred HHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcC----HHHHhcCHHHhc
Confidence 888888877666543 357889999999999999999999 999999999986
No 89
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.6e-41 Score=383.28 Aligned_cols=260 Identities=27% Similarity=0.477 Sum_probs=232.4
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++|+||+++++++...+.+|+
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 35689999999999999999999999999999999987766666677888999999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 119 v~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG- 195 (335)
T ss_dssp EECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT-
T ss_pred EEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc-
Confidence 99999999999998764 459999999999999999999999999999999999999999999999999986532110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 196 --------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 249 (335)
T 2owb_A 196 --------------------------ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 249 (335)
T ss_dssp --------------------------CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred --------------------------ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHH
Confidence 112345799999999999999999999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+..+......++. .++..+.+||.+||+.||.+||+ +.++++||||+..
T Consensus 250 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~Rps----~~ell~~~~~~~~ 298 (335)
T 2owb_A 250 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSG 298 (335)
T ss_dssp HHHHHHTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTS
T ss_pred HHHHhcCCCCCCc--cCCHHHHHHHHHHccCChhHCcC----HHHHhcCccccCC
Confidence 8888777665554 46889999999999999999999 9999999999874
No 90
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.2e-41 Score=374.40 Aligned_cols=260 Identities=27% Similarity=0.474 Sum_probs=231.8
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|.+.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 34689999999999999999999999999999999987766666677888999999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 93 v~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 168 (294)
T 2rku_A 93 VLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD-- 168 (294)
T ss_dssp EEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCST--
T ss_pred EEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccC--
Confidence 99999999999998764 45999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus 169 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~ 223 (294)
T 2rku_A 169 -------------------------GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET 223 (294)
T ss_dssp -------------------------TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred -------------------------ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 0112345799999999999998899999999999999999999999999888888
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+..+......++. ..+..+.+||.+||+.||.+||| +.++++||||+..
T Consensus 224 ~~~~~~~~~~~~~--~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~~~~~~~ 272 (294)
T 2rku_A 224 YLRIKKNEYSIPK--HINPVAASLIQKMLQTDPTARPT----INELLNDEFFTSG 272 (294)
T ss_dssp HHHHHTTCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSHHHHTS
T ss_pred HHHHhhccCCCcc--ccCHHHHHHHHHHcccChhhCcC----HHHHhhChheecC
Confidence 8877777665554 46889999999999999999999 9999999999874
No 91
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.3e-41 Score=389.69 Aligned_cols=271 Identities=23% Similarity=0.412 Sum_probs=217.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.... ........+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF-QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTT-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEecccc-CChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 578999999999999999999999999999999997642 34455677889999999999999999999997654
Q ss_pred -eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 739 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
.+|+||||++ ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~ 177 (371)
T 2xrw_A 103 QDVYIVMELMD-ANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA 177 (371)
T ss_dssp CEEEEEEECCS-EEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----
T ss_pred cceEEEEEcCC-CCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccc
Confidence 7899999995 578888853 3899999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
... ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus 178 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 229 (371)
T 2xrw_A 178 GTS----------------------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGT 229 (371)
T ss_dssp ----------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccc----------------------------cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 210 1123457999999999999999999999999999999999999999998
Q ss_pred ChHHHHHHHHhCCCCC-------------------CCCC---------------------CCcHHHHHHHHHccccCccC
Q 001902 898 TRQKTFANILHKDLKF-------------------PSST---------------------PTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~-------------------~~~~---------------------~~s~~l~~Ll~~~L~~dP~~ 937 (998)
+....+..+....... +... ..+..+.+||.+||..||.+
T Consensus 230 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~ 309 (371)
T 2xrw_A 230 DHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASK 309 (371)
T ss_dssp SHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGG
T ss_pred CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhh
Confidence 8877777766431110 0000 01457899999999999999
Q ss_pred cCCChhcHHHHHcCCCccCCChhhhhcCCCCCCCC
Q 001902 938 RLGSHEGANEIKKHPFFKGVNWALVRCMNPPELDA 972 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~~~~~~~~~~~~~~~~~ 972 (998)
||| +.++|+||||+...........||..+.
T Consensus 310 R~t----~~e~l~hp~~~~~~~~~~~~~~~~~~~~ 340 (371)
T 2xrw_A 310 RIS----VDEALQHPYINVWYDPSEAEAPPPKIPD 340 (371)
T ss_dssp SCC----HHHHHHSHHHHTTCCHHHHTCCCCCCCT
T ss_pred CCC----HHHHhCCcchhhhcCccccCCCCCCCCC
Confidence 999 9999999999975444444444445433
No 92
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=4.9e-42 Score=385.86 Aligned_cols=253 Identities=29% Similarity=0.480 Sum_probs=198.9
Q ss_pred Ccccc---cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEE
Q 001902 666 HFRPI---KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 741 (998)
Q Consensus 666 ~y~~~---~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 741 (998)
+|++. +.||+|+||.||+|.+..+++.||+|++.+. ......+|+.+++.+. ||||+++++++.+....|
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~ 82 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR------MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTF 82 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG------GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh------hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEE
Confidence 45554 7899999999999999999999999998754 2356778999999996 999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~DFG~a~~~~ 818 (998)
+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++....
T Consensus 83 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~ 160 (325)
T 3kn6_A 83 LVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP 160 (325)
T ss_dssp EEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECC
T ss_pred EEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecC
Confidence 999999999999999875 4599999999999999999999999999999999999998766 89999999986432
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+
T Consensus 161 ~~---------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 213 (325)
T 3kn6_A 161 PD---------------------------NQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213 (325)
T ss_dssp C-------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred CC---------------------------CCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCc
Confidence 11 111234568999999999999999999999999999999999999998644
Q ss_pred h-------HHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 899 R-------QKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 899 ~-------~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
. ...+..+..+...++.. ..++.++.+||.+||..||.+||| +.++++||||+..
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt----~~ell~h~w~~~~ 277 (325)
T 3kn6_A 214 RSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK----MSGLRYNEWLQDG 277 (325)
T ss_dssp ----CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCC----TTTSTTCGGGCTT
T ss_pred cccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCC----HHHHhcChhhccC
Confidence 3 45566666666554432 347889999999999999999999 8899999999874
No 93
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.7e-42 Score=386.99 Aligned_cols=266 Identities=25% Similarity=0.418 Sum_probs=218.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++.++||||+++++++...+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 3689999999999999999999999999999999986543221 13345667999999999999999999999999
Q ss_pred eEEEEEecCCCC-chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 739 HVCLITDYCPGG-ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 739 ~~~lV~E~~~gg-sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
.+++||||+.+| +|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~ 180 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceEC
Confidence 999999999766 999999775 45999999999999999999999999999999999999999999999999998653
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
... ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus 181 ~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 232 (335)
T 3dls_A 181 ERG----------------------------KLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232 (335)
T ss_dssp CTT----------------------------CCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSS
T ss_pred CCC----------------------------CceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhh
Confidence 211 11234579999999999988776 7799999999999999999999976
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC------CChhhhhcCCCCCC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG------VNWALVRCMNPPEL 970 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~------~~~~~~~~~~~~~~ 970 (998)
... ...... .....++.++.+||.+||..||.+||| +.++++||||+. ..|..+.....|..
T Consensus 233 ~~~------~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~~~~~~~~~~~~~~~~~~~ 300 (335)
T 3dls_A 233 LEE------TVEAAI--HPPYLVSKELMSLVSGLLQPVPERRTT----LEKLVTDPWVTQPVNLADYTWEEVFRVNKPES 300 (335)
T ss_dssp GGG------GTTTCC--CCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHHCTTTTCCCCGGGCCHHHHC-------
T ss_pred HHH------HHhhcc--CCCcccCHHHHHHHHHHccCChhhCcC----HHHHhcCccccCCccccccCHHHHhhhcCCCC
Confidence 322 122222 223346889999999999999999999 999999999976 66776666555554
Q ss_pred C
Q 001902 971 D 971 (998)
Q Consensus 971 ~ 971 (998)
.
T Consensus 301 ~ 301 (335)
T 3dls_A 301 G 301 (335)
T ss_dssp -
T ss_pred c
Confidence 3
No 94
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=5.8e-42 Score=390.67 Aligned_cols=265 Identities=25% Similarity=0.406 Sum_probs=224.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.+..+++.||+|++.... .......+.+|+.+++.++||||+++++++...+..
T Consensus 29 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 106 (360)
T 3eqc_A 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI--KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEI 106 (360)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC--CHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEE
T ss_pred ccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc--CHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEE
Confidence 455689999999999999999999999999999999998642 445567788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
|+||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.....
T Consensus 107 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 184 (360)
T 3eqc_A 107 SICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID 184 (360)
T ss_dssp EEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHH
T ss_pred EEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccc
Confidence 9999999999999999875 3599999999999999999999996 999999999999999999999999999844210
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.
T Consensus 185 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 235 (360)
T 3eqc_A 185 -----------------------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDA 235 (360)
T ss_dssp -----------------------------HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCH
T ss_pred -----------------------------ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 112345799999999999999999999999999999999999999987665
Q ss_pred HHHH------------------------------------------HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccC
Q 001902 900 QKTF------------------------------------------ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKS 937 (998)
Q Consensus 900 ~~~~------------------------------------------~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~ 937 (998)
.... ..+............++.++.+||.+||..||.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 315 (360)
T 3eqc_A 236 KELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAE 315 (360)
T ss_dssp HHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTT
T ss_pred HHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhh
Confidence 4332 2222232222223346889999999999999999
Q ss_pred cCCChhcHHHHHcCCCccCCChhhh
Q 001902 938 RLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 938 Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
||| +.++|+||||+...+..+
T Consensus 316 Rpt----~~ell~hp~~~~~~~~~~ 336 (360)
T 3eqc_A 316 RAD----LKQLMVHAFIKRSDAEEV 336 (360)
T ss_dssp SCC----HHHHHTSHHHHHHHHSCC
T ss_pred CCC----HHHHhhChHhhcchHhhh
Confidence 999 999999999998766543
No 95
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.3e-41 Score=372.41 Aligned_cols=261 Identities=28% Similarity=0.479 Sum_probs=221.1
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+..++|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++...+.
T Consensus 6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 85 (276)
T 2h6d_A 6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTD 85 (276)
T ss_dssp -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCe
Confidence 34567899999999999999999999998999999999986543334445678899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.....
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 99999999999999999765 3589999999999999999999999999999999999999999999999999855321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
. .......||+.|+|||.+.+..+ +.++|||||||++|+|++|..||...+
T Consensus 164 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 215 (276)
T 2h6d_A 164 G----------------------------EFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH 215 (276)
T ss_dssp -----------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred C----------------------------cceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc
Confidence 1 01123468999999999988765 579999999999999999999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
....+..+......++. ..+..+.+||.+||+.||.+||| +.++++||||+.
T Consensus 216 ~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~~p~~Rps----~~~~l~h~~~~~ 267 (276)
T 2h6d_A 216 VPTLFKKIRGGVFYIPE--YLNRSVATLLMHMLQVDPLKRAT----IKDIREHEWFKQ 267 (276)
T ss_dssp HHHHHHHHHHCCCCCCT--TSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHT
T ss_pred HHHHHHHhhcCcccCch--hcCHHHHHHHHHHccCChhhCCC----HHHHHhChhhcc
Confidence 88888877776655543 46789999999999999999999 999999999986
No 96
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-41 Score=404.62 Aligned_cols=258 Identities=30% Similarity=0.502 Sum_probs=221.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..++..||+|++.+..... .....+.+|+.+++.++||||+++++++.....+|+||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVST-SSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC------CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCc-hHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 57999999999999999999999999999999998654322 23467888999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~~~~~~ 821 (998)
|||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.. +.+||+|||++......
T Consensus 116 e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~- 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ- 192 (494)
T ss_dssp ECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT-
T ss_pred ecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC-
Confidence 999999999988764 459999999999999999999999999999999999999764 45999999998654311
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+...
T Consensus 193 ---------------------------~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 244 (494)
T 3lij_A 193 ---------------------------KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQE 244 (494)
T ss_dssp ---------------------------BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 1123457999999999986 468999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 902 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 902 ~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.+..+......++. ...++..+++||.+||..||.+||| +.++|+||||+...
T Consensus 245 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s----~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 245 ILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRIS----AQQALEHPWIKEMC 299 (494)
T ss_dssp HHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTCHHHHHHH
T ss_pred HHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCcc----HHHHhcCcccccCc
Confidence 99988887665543 3567899999999999999999999 99999999998753
No 97
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=9.6e-42 Score=386.62 Aligned_cols=268 Identities=25% Similarity=0.445 Sum_probs=231.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChh--------------HHHHHHHHHHHHHhCCCCC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRN--------------KVHRACAEREILDMLDHPF 726 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~--------------~~~~~~~E~~il~~l~h~n 726 (998)
.+..++|++++.||+|+||.||+|.+ +|+.||+|++......... ....+.+|+.+++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 34568999999999999999999999 8999999999865332221 1277889999999999999
Q ss_pred ccceeEEEeeCCeEEEEEecCCCCchhHH------HhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-CCceeccCCCCcEE
Q 001902 727 VPALYASFQTKTHVCLITDYCPGGELFLL------LDRQPTKVLKEDAVRFYAAEVVVALEYLHC-QGIIYRDLKPENVL 799 (998)
Q Consensus 727 Iv~l~~~~~~~~~~~lV~E~~~ggsL~~~------l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-~~IiHrDLkP~NIL 799 (998)
|+++++++...+.+|+||||+++++|.++ +.......+++..++.++.||+.||.|||+ +||+||||||+|||
T Consensus 105 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil 184 (348)
T 2pml_X 105 CLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184 (348)
T ss_dssp BCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred cceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence 99999999999999999999999999998 665445679999999999999999999999 99999999999999
Q ss_pred EecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCC-hhHH
Q 001902 800 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTS-AVDW 877 (998)
Q Consensus 800 i~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~-~sDI 877 (998)
++.++.+||+|||++...... ......||+.|+|||++.+. .++. ++||
T Consensus 185 ~~~~~~~kl~dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 235 (348)
T 2pml_X 185 MDKNGRVKLSDFGESEYMVDK-----------------------------KIKGSRGTYEFMPPEFFSNESSYNGAKVDI 235 (348)
T ss_dssp ECTTSCEEECCCTTCEECBTT-----------------------------EECSSCSCGGGCCGGGGSSCCCEEHHHHHH
T ss_pred EcCCCcEEEeccccccccccc-----------------------------cccCCCCCcCccCchhhcCCCCCCcchhhH
Confidence 999999999999998543211 12345699999999999887 5666 9999
Q ss_pred HHHHHHHHHHHcCCCCCCCCCh-HHHHHHHHhCCCCCCCC-----------------CCCcHHHHHHHHHccccCccCcC
Q 001902 878 WALGILLYEMLYGYTPFRGKTR-QKTFANILHKDLKFPSS-----------------TPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 878 wSlG~il~eLltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~-----------------~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
|||||++|+|++|..||..... ......+......++.. ...+..+.+||.+||+.||.+||
T Consensus 236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp 315 (348)
T 2pml_X 236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERI 315 (348)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCC
Confidence 9999999999999999998777 67777777766665532 45788999999999999999999
Q ss_pred CChhcHHHHHcCCCccCCChhhhh
Q 001902 940 GSHEGANEIKKHPFFKGVNWALVR 963 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~~~~~~~~ 963 (998)
| +.++++||||+..+|..+.
T Consensus 316 s----~~e~l~hp~f~~~~~~~~~ 335 (348)
T 2pml_X 316 T----SEDALKHEWLADTNIEDLR 335 (348)
T ss_dssp C----HHHHHTSGGGTTCCHHHHH
T ss_pred C----HHHHhcCccccCCCHHHHH
Confidence 9 9999999999999987664
No 98
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=9.7e-42 Score=404.99 Aligned_cols=257 Identities=28% Similarity=0.463 Sum_probs=225.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++.+.... ......+.+|+.++++++||||+++++++.....+|+||
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK-NKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHB-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEeccccc-chHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 5799999999999999999999999999999999764332 223567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe---cCCcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~---~~g~vkL~DFG~a~~~~~~~ 821 (998)
|||.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 101 e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~- 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN- 177 (486)
T ss_dssp CCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC-
T ss_pred EcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC-
Confidence 999999999988764 4599999999999999999999999999999999999995 4567999999998653211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
......+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.+.+...
T Consensus 178 ---------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~ 229 (486)
T 3mwu_A 178 ---------------------------TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD 229 (486)
T ss_dssp -------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred ---------------------------CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 11234579999999999976 48999999999999999999999999999999
Q ss_pred HHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+..+..+...++ ....+|..+++||.+||..||.+||| +.++|+||||+..
T Consensus 230 ~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~~~l~hp~~~~~ 283 (486)
T 3mwu_A 230 ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKY 283 (486)
T ss_dssp HHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCC----HHHHHHCHHHHHT
T ss_pred HHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcC----HHHHhcCHhhccC
Confidence 9988888765543 44567899999999999999999999 9999999999875
No 99
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=8.6e-42 Score=375.23 Aligned_cols=265 Identities=31% Similarity=0.493 Sum_probs=227.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 3579999999999999999999999999999999986543221 2356788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC----cEEEEeccCccc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG----HVSLTDFDLSCL 816 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g----~vkL~DFG~a~~ 816 (998)
++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||++..
T Consensus 84 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 9999999999999999764 4599999999999999999999999999999999999999877 899999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 162 ~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~ 213 (283)
T 3bhy_A 162 IEAG----------------------------NEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 213 (283)
T ss_dssp CC------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ccCC----------------------------CcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCC
Confidence 3211 111234689999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 897 KTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.+.......+......++. ....+..+.+||.+||..||.+||+ +.++++||||+.+.+...
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~~~~~~ 277 (283)
T 3bhy_A 214 ETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMT----IAQSLEHSWIKAIRRRNV 277 (283)
T ss_dssp SSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCC----HHHHHHCHHHHHHHHCCC
T ss_pred cchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcC----HHHHHhCHHHHHHHHHhh
Confidence 9888888877766554432 2456888999999999999999999 999999999998755443
No 100
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.7e-41 Score=404.63 Aligned_cols=259 Identities=28% Similarity=0.439 Sum_probs=224.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh----------hHHHHHHHHHHHHHhCCCCCccceeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR----------NKVHRACAEREILDMLDHPFVPALYAS 733 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~----------~~~~~~~~E~~il~~l~h~nIv~l~~~ 733 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.+...... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 4789999999999999999999999999999999986543221 235678899999999999999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEe
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTD 810 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~D 810 (998)
+.....+|+|||||+|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~D 192 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVD 192 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEE
Confidence 99999999999999999999998764 4599999999999999999999999999999999999999776 699999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcC
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG 890 (998)
||++...... ......+||+.|+|||++.+ .++.++|||||||++|+|++|
T Consensus 193 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g 243 (504)
T 3q5i_A 193 FGLSSFFSKD----------------------------YKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCG 243 (504)
T ss_dssp CTTCEECCTT----------------------------SCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHS
T ss_pred CCCCEEcCCC----------------------------CccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhC
Confidence 9998654311 11234579999999999874 589999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 891 YTPFRGKTRQKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 891 ~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+||.+.+....+..+..+...++. ...++.++++||.+||..||.+||| +.++|+||||+..
T Consensus 244 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t----~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCT----AEEALNSRWIKKY 308 (504)
T ss_dssp SCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHHT
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCC----HHHHhcCHhhhhc
Confidence 9999999999999999887765542 3567899999999999999999999 9999999999874
No 101
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.4e-41 Score=374.78 Aligned_cols=263 Identities=27% Similarity=0.447 Sum_probs=219.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.++++++||||+++++++...+..|+|
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE-TEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 80 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC---------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCcc-chhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEE
Confidence 4689999999999999999999999999999999875432 222335677899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||++ ++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++......
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~--- 156 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP--- 156 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC---
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCC---
Confidence 99995 69999998765566999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........||+.|+|||++.+.. ++.++|||||||++|+|++|..||.+.+....
T Consensus 157 ------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~ 212 (299)
T 2r3i_A 157 ------------------------VRTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ 212 (299)
T ss_dssp ------------------------SBCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred ------------------------ccccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence 11123346899999999998765 78999999999999999999999999888777
Q ss_pred HHHHHhCCCC------------------CCC---------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 903 FANILHKDLK------------------FPS---------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 903 ~~~i~~~~~~------------------~~~---------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
+..+...... ++. ....+.++.+||.+||+.||.+||| +.++++||||+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~~~l~hp~~~ 288 (299)
T 2r3i_A 213 LFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS----AKAALAHPFFQ 288 (299)
T ss_dssp HHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSGGGT
T ss_pred HHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCC----HHHHhcChhhh
Confidence 7766542100 111 1236788999999999999999999 99999999999
Q ss_pred CCCh
Q 001902 956 GVNW 959 (998)
Q Consensus 956 ~~~~ 959 (998)
.+.+
T Consensus 289 ~~~~ 292 (299)
T 2r3i_A 289 DVTK 292 (299)
T ss_dssp TCCC
T ss_pred cCCC
Confidence 8643
No 102
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.2e-41 Score=378.72 Aligned_cols=264 Identities=26% Similarity=0.386 Sum_probs=222.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEee----
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQT---- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~---- 736 (998)
...++|++++.||+|+||.||+|.+..+|+.||+|++.... .....+.+|+.+++++ +||||+++++++..
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 96 (326)
T 2x7f_A 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP 96 (326)
T ss_dssp CCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS----STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc----ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCc
Confidence 34578999999999999999999999999999999987542 2235678899999999 89999999999976
Q ss_pred --CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 737 --KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 737 --~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
.+.+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++
T Consensus 97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 97 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred cccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 568999999999999999998765567999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHc
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLlt 889 (998)
...... ........||+.|+|||++. +..++.++|||||||++|+|++
T Consensus 177 ~~~~~~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~ 229 (326)
T 2x7f_A 177 AQLDRT---------------------------VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE 229 (326)
T ss_dssp C----------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred eecCcC---------------------------ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence 543211 01123457999999999997 5678899999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 890 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
|..||.+.+....+..+.....+......++..+.+||.+||..||.+||+ +.++++||||+...+.
T Consensus 230 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~ 296 (326)
T 2x7f_A 230 GAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPA----TEQLMKHPFIRDQPNE 296 (326)
T ss_dssp SSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCC----HHHHHTSHHHHCCTTH
T ss_pred CCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCC----HHHHhhChHHhhCccc
Confidence 999999988877777777665554445567899999999999999999999 9999999999987554
No 103
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-41 Score=385.69 Aligned_cols=266 Identities=27% Similarity=0.380 Sum_probs=216.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC--hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN--RNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~--~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++....... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 88 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNIS 88 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCE
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceE
Confidence 468999999999999999999999999999999997543221 112246778999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++......
T Consensus 89 lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~- 165 (346)
T 1ua2_A 89 LVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP- 165 (346)
T ss_dssp EEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSC-
T ss_pred EEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCC-
Confidence 99999965 898888764 346899999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.+..
T Consensus 166 --------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~ 219 (346)
T 1ua2_A 166 --------------------------NRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL 219 (346)
T ss_dssp --------------------------CCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred --------------------------cccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH
Confidence 1122345789999999999764 5788999999999999999999999999888
Q ss_pred HHHHHHHhCCC-----CCCC---------------------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCc
Q 001902 901 KTFANILHKDL-----KFPS---------------------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFF 954 (998)
Q Consensus 901 ~~~~~i~~~~~-----~~~~---------------------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f 954 (998)
..+..+..... .++. ....+..+.+||.+||..||.+||| +.++|+||||
T Consensus 220 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~h~~f 295 (346)
T 1ua2_A 220 DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT----ATQALKMKYF 295 (346)
T ss_dssp HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC----HHHHHTSGGG
T ss_pred HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC----HHHHhcChhh
Confidence 88777765210 1110 0334678999999999999999999 9999999999
Q ss_pred cCCChhhh
Q 001902 955 KGVNWALV 962 (998)
Q Consensus 955 ~~~~~~~~ 962 (998)
+...+...
T Consensus 296 ~~~~~~~~ 303 (346)
T 1ua2_A 296 SNRPGPTP 303 (346)
T ss_dssp TSSSCCCC
T ss_pred hcCCCCCC
Confidence 98766544
No 104
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.6e-41 Score=388.15 Aligned_cols=260 Identities=27% Similarity=0.404 Sum_probs=205.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK------ 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~------ 737 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF-QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccc-cCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 378999999999999999999999999999999987542 3445567788999999999999999999998654
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..+|+||||+ +++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 5689999999 8999999865 35999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+
T Consensus 183 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 232 (367)
T 2fst_X 183 AD------------------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 232 (367)
T ss_dssp --------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 20 1224579999999999987 6789999999999999999999999999
Q ss_pred CChHHHHHHHHhCC-----------------------CCCCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKD-----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~-----------------------~~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+.... ...+. ....+..+.+||.+||..||.+||| +.+
T Consensus 233 ~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t----~~e 308 (367)
T 2fst_X 233 TDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRIT----AAQ 308 (367)
T ss_dssp SSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCC----HHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcC----HHH
Confidence 88877776665410 00010 1235778999999999999999999 999
Q ss_pred HHcCCCccCCChhhh
Q 001902 948 IKKHPFFKGVNWALV 962 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~ 962 (998)
+|+||||+......-
T Consensus 309 ~L~hp~~~~~~~~~~ 323 (367)
T 2fst_X 309 ALAHAYFAQYHDPDD 323 (367)
T ss_dssp HHTSGGGTTTCCGGG
T ss_pred HhcChhhhhccCCCC
Confidence 999999998765443
No 105
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.1e-41 Score=376.63 Aligned_cols=255 Identities=33% Similarity=0.532 Sum_probs=223.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|.+.+.||+|+||.||+|.+..+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+..|+||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA---FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVM 85 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC---------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc---cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEE
Confidence 579999999999999999999999999999999985422 22356778999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~~~~ 821 (998)
||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 86 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 86 QLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred EcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 999999999998764 458999999999999999999999999999999999999 7789999999999854210
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 162 ---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 214 (304)
T 2jam_A 162 ---------------------------GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESK 214 (304)
T ss_dssp ---------------------------BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred ---------------------------CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 01123468999999999999999999999999999999999999999998888
Q ss_pred HHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 902 TFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 902 ~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
....+......++. ...++..+.+||.+||..||.+||+ +.++++||||++.
T Consensus 215 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~~l~h~~~~~~ 268 (304)
T 2jam_A 215 LFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT----CEKALSHPWIDGN 268 (304)
T ss_dssp HHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCC----HHHHHTSHHHHSS
T ss_pred HHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcC----HHHHhcCccccCC
Confidence 88888877655443 3567899999999999999999999 9999999999874
No 106
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=3.1e-41 Score=369.13 Aligned_cols=260 Identities=26% Similarity=0.420 Sum_probs=221.4
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
++|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+..|+||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA--VDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC--TTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc--hhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 579999999999999999999999999999999975432 234567889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCC
Q 001902 745 DYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLL 824 (998)
Q Consensus 745 E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~ 824 (998)
||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 85 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~--- 159 (276)
T 2yex_A 85 EYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNN--- 159 (276)
T ss_dssp ECCTTEEGGGGSBTT--TBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETT---
T ss_pred EecCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCc---
Confidence 999999999998754 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCCCCCCChH-HH
Q 001902 825 LPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTPFRGKTRQ-KT 902 (998)
Q Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~Pf~~~~~~-~~ 902 (998)
.........||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+.... ..
T Consensus 160 ----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 217 (276)
T 2yex_A 160 ----------------------RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQE 217 (276)
T ss_dssp ----------------------EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHH
T ss_pred ----------------------chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHH
Confidence 0011234579999999999987665 67999999999999999999999876543 33
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
+..+.......+.....+..+.+||.+||..||.+||| +.++++||||+..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~~~~~~~~ 268 (276)
T 2yex_A 218 YSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT----IPDIKKDRWYNKP 268 (276)
T ss_dssp HHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCC----HHHHTTCTTTTCC
T ss_pred HHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCC----HHHHhcCccccCh
Confidence 44444444444444567889999999999999999999 9999999999874
No 107
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.7e-41 Score=378.97 Aligned_cols=254 Identities=25% Similarity=0.356 Sum_probs=207.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
.++|++++.||+|+||+||+|.+..+|+.||||++..... ..........|+..+..+ +|+||+++++++...+.+|+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFR-GPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCC-SHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEeccccc-ChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 4689999999999999999999999999999999875433 233334445555555544 99999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+ +++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 135 v~e~~-~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~-- 210 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTA-- 210 (311)
T ss_dssp EEECC-CCBHHHHHHHHC-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred EEecc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccC--
Confidence 99999 779988887653 45999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
.......||+.|+|||++.+ .++.++|||||||++|+|++|..||.+.. .
T Consensus 211 --------------------------~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~---~ 260 (311)
T 3p1a_A 211 --------------------------GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGE---G 260 (311)
T ss_dssp ------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHH---H
T ss_pred --------------------------CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCcc---H
Confidence 11234469999999999876 68999999999999999999977776532 2
Q ss_pred HHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 903 FANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 903 ~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
...+.....+......++..+.+||.+||+.||.+||| +.++|+||||+.
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 310 (311)
T 3p1a_A 261 WQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRAT----AEALLALPVLRQ 310 (311)
T ss_dssp HHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGSC
T ss_pred HHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcC----HHHHHhCccccC
Confidence 33333333222223456889999999999999999999 999999999985
No 108
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.3e-41 Score=371.87 Aligned_cols=253 Identities=22% Similarity=0.326 Sum_probs=215.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+.+|
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~ 87 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYY 87 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEE
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEE
Confidence 34578999999999999999999999999999999997665556667788999999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 88 lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 88 LVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 999999999999999875 459999999999999999999999999999999999999999999999999986542110
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+...
T Consensus 166 --------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~ 219 (294)
T 4eqm_A 166 --------------------------LTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVS 219 (294)
T ss_dssp -----------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHH
T ss_pred --------------------------ccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence 112234579999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCCh
Q 001902 902 TFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSH 942 (998)
Q Consensus 902 ~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~ 942 (998)
..........+.. ....++..+.++|.+||..||.+||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~ 263 (294)
T 4eqm_A 220 IAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTI 263 (294)
T ss_dssp HHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSH
T ss_pred HHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccH
Confidence 7766666543321 2345788999999999999999999743
No 109
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.9e-41 Score=387.39 Aligned_cols=258 Identities=27% Similarity=0.456 Sum_probs=212.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-----
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----- 736 (998)
...++|++++.||+|+||.||+|.+..+|+.||+|++..... ...+|+.+++.++||||++++++|..
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-------~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~ 76 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-------YKNRELDIMKVLDHVNIIKLVDYFYTTGDEE 76 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHTTCCCTTBCCEEEEEEEC----
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-------hHHHHHHHHHHcCCCCccchhheeeecCccc
Confidence 345789999999999999999999999999999999875421 22369999999999999999999843
Q ss_pred ---------------------------------CCeEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHH
Q 001902 737 ---------------------------------KTHVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALE 781 (998)
Q Consensus 737 ---------------------------------~~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~ 781 (998)
..++++||||++ ++|.+.+.. .....+++..++.++.||+.||.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 77 PKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp ---------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHH
Confidence 345899999996 588777653 23456999999999999999999
Q ss_pred HHHHCCceeccCCCCcEEEe-cCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCc
Q 001902 782 YLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEY 860 (998)
Q Consensus 782 ~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 860 (998)
|||++||+||||||+|||++ .++.+||+|||++...... .......||+.|
T Consensus 156 ~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~----------------------------~~~~~~~~t~~y 207 (383)
T 3eb0_A 156 FIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS----------------------------EPSVAYICSRFY 207 (383)
T ss_dssp HHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT----------------------------SCCCCCCCCSSC
T ss_pred HHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC----------------------------CCCcCcccCCCc
Confidence 99999999999999999998 6899999999999653211 122345789999
Q ss_pred ccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhC-----------------CCCCCC-------
Q 001902 861 IAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHK-----------------DLKFPS------- 915 (998)
Q Consensus 861 ~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~-----------------~~~~~~------- 915 (998)
+|||++.+. .++.++|||||||++|+|++|.+||.+.+..+.+..++.. ...++.
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWR 287 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHH
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHH
Confidence 999999875 4899999999999999999999999999888877777641 111111
Q ss_pred ---CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 916 ---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 916 ---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
....+..+.+||.+||..||.+||| +.++|+||||+.+..
T Consensus 288 ~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~l~hp~f~~~~~ 330 (383)
T 3eb0_A 288 KILPEGTPSLAIDLLEQILRYEPDLRIN----PYEAMAHPFFDHLRN 330 (383)
T ss_dssp HHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSGGGHHHHH
T ss_pred hhCCCCCCHHHHHHHHHHccCChhhCCC----HHHHhcCHHHHHHHh
Confidence 1236788999999999999999999 999999999997644
No 110
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=6.3e-41 Score=370.02 Aligned_cols=257 Identities=22% Similarity=0.355 Sum_probs=216.7
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee----CC
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----KT 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~~ 738 (998)
....|++.+.||+|+||.||+|.+..++..||+|++..... .......+.+|+.+++.++||||+++++++.. ..
T Consensus 24 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 102 (290)
T 1t4h_A 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL-TKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK 102 (290)
T ss_dssp TSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred CceeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhh-CHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCc
Confidence 34568999999999999999999999999999999986533 44556788899999999999999999998865 46
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEe-cCCcEEEEeccCcc
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQ-GNGHVSLTDFDLSC 815 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~-~~g~vkL~DFG~a~ 815 (998)
.+|+||||+++++|.+++... ..++...++.++.||+.||.|||++| |+||||||+|||++ .++.+||+|||++.
T Consensus 103 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~ 180 (290)
T 1t4h_A 103 CIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLAT 180 (290)
T ss_dssp EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGG
T ss_pred eEEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcc
Confidence 789999999999999999874 45899999999999999999999999 99999999999998 78999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
.... .......||+.|+|||++.+ .++.++|||||||++|+|++|..||.
T Consensus 181 ~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~ 230 (290)
T 1t4h_A 181 LKRA-----------------------------SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS 230 (290)
T ss_dssp GCCT-----------------------------TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred cccc-----------------------------cccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCC
Confidence 4221 11234569999999998875 58999999999999999999999998
Q ss_pred CCChHHHHHHHH-hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 896 GKTRQKTFANIL-HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 896 ~~~~~~~~~~i~-~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+........... ....+.......+..+.+||.+||..||.+||| +.++++||||++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~f~~ 288 (290)
T 1t4h_A 231 ECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYS----IKDLLNHAFFQE 288 (290)
T ss_dssp TCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCC----HHHHHTSGGGC-
T ss_pred CcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCC----HHHHhhCccccc
Confidence 865544444443 333332233445788999999999999999999 999999999986
No 111
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=5.5e-41 Score=381.24 Aligned_cols=265 Identities=25% Similarity=0.320 Sum_probs=217.4
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 736 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------- 736 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENE-KEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSC-SSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccc-cccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 4689999999999999999999999999999999876532 22234567789999999999999999999976
Q ss_pred -CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 737 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 737 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
.+.+|+||||++ ++|.+.+.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 95 ~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 95 CKGSIYLVFDFCE-HDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp --CEEEEEEECCS-EEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CCceEEEEEeccC-CCHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 457899999995 57777776542 459999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
........ .........||+.|+|||++.+ ..++.++|||||||++|+|++|.+||
T Consensus 173 ~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf 229 (351)
T 3mi9_A 173 AFSLAKNS-----------------------QPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIM 229 (351)
T ss_dssp ECCCCSSS-----------------------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccccccc-----------------------cccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCC
Confidence 54311110 0112244578999999999976 45799999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC--CCC----------------------------CcHHHHHHHHHccccCccCcCCChhc
Q 001902 895 RGKTRQKTFANILHKDLKFPS--STP----------------------------TSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~--~~~----------------------------~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.+.+.......+.......+. ... .+..+.+||.+||..||.+|||
T Consensus 230 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---- 305 (351)
T 3mi9_A 230 QGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRID---- 305 (351)
T ss_dssp CCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCC----
T ss_pred CCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCC----
Confidence 998887777766542111111 100 2567899999999999999999
Q ss_pred HHHHHcCCCccCCC
Q 001902 945 ANEIKKHPFFKGVN 958 (998)
Q Consensus 945 a~elL~Hp~f~~~~ 958 (998)
+.++|+||||+...
T Consensus 306 ~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 306 SDDALNHDFFWSDP 319 (351)
T ss_dssp HHHHHTSGGGGSSS
T ss_pred HHHHhCCCCcCCCC
Confidence 99999999998743
No 112
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-41 Score=374.35 Aligned_cols=266 Identities=25% Similarity=0.385 Sum_probs=223.6
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-ChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCeE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-NRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHV 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~ 740 (998)
.++|++.+.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++++. ..+..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 46899999999999999999999999999999999764322 1344577889999999999999999999984 45689
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||++++ |.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~ 162 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPF 162 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTT
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcc
Confidence 9999999665 778877665667999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC--CChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH--TSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~--~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
.. ........||+.|+|||++.+... +.++|||||||++|+|++|..||.+.+
T Consensus 163 ~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 217 (305)
T 2wtk_C 163 AA-------------------------DDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDN 217 (305)
T ss_dssp CS-------------------------SCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cc-------------------------ccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCch
Confidence 00 011234569999999999977543 679999999999999999999999998
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
.......+......++. .++..+.+||.+||..||.+||| +.++++||||+......
T Consensus 218 ~~~~~~~i~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~~~~ 274 (305)
T 2wtk_C 218 IYKLFENIGKGSYAIPG--DCGPPLSDLLKGMLEYEPAKRFS----IRQIRQHSWFRKKHPPA 274 (305)
T ss_dssp HHHHHHHHHHCCCCCCS--SSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSHHHHSCCCC-
T ss_pred HHHHHHHHhcCCCCCCC--ccCHHHHHHHHHHccCChhhCCC----HHHHhcCcccccCCCCc
Confidence 88888888877665543 46889999999999999999999 99999999999865543
No 113
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=4e-41 Score=392.96 Aligned_cols=256 Identities=25% Similarity=0.422 Sum_probs=217.2
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC------CCCCccceeEEEee
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML------DHPFVPALYASFQT 736 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l------~h~nIv~l~~~~~~ 736 (998)
...+|++++.||+|+||.||+|.+..+++.||+|++... ......+..|+.+++.+ +|+||+++++++..
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~ 170 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE----KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF 170 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc----cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc
Confidence 346899999999999999999999999999999998753 23445677788888877 57799999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc--EEEEeccCc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH--VSLTDFDLS 814 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~--vkL~DFG~a 814 (998)
.+.+|+||||+ +++|.+++.......+++..++.++.||+.||.|||++|||||||||+|||++.++. +||+|||++
T Consensus 171 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 171 RNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp TTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred CCeEEEEEecc-CCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 99999999999 579999998776566999999999999999999999999999999999999999887 999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
+... ......+||+.|+|||++.+..++.++|||||||++|+|++|.+||
T Consensus 250 ~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf 299 (429)
T 3kvw_A 250 CYEH------------------------------QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL 299 (429)
T ss_dssp EETT------------------------------CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred eecC------------------------------CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCC
Confidence 5422 1122457999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCC--------------------CC-----------------------------C--------CC
Q 001902 895 RGKTRQKTFANILHKDLK--------------------FP-----------------------------S--------ST 917 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~--------------------~~-----------------------------~--------~~ 917 (998)
.+.+....+..+...... ++ . ..
T Consensus 300 ~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 379 (429)
T 3kvw_A 300 PGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKG 379 (429)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTT
T ss_pred CCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccc
Confidence 998887777666531000 00 0 01
Q ss_pred CCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 918 PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 918 ~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
..+..+.+||.+||+.||.+||| +.++|+||||+..
T Consensus 380 ~~~~~~~dli~~~L~~dP~~Rpt----a~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 380 CDDPLFLDFLKQCLEWDPAVRMT----PGQALRHPWLRRR 415 (429)
T ss_dssp CCCHHHHHHHHHHTCSSTTTSCC----HHHHHTSTTTC--
T ss_pred cchHHHHHHHHHHCCCChhhCCC----HHHHhCChhhccC
Confidence 23678899999999999999999 9999999999973
No 114
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.4e-42 Score=383.62 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=221.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC----e
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----H 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----~ 739 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++.............+.+|+.++++++||||+++++++.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 578999999999999999999999999999999998766556666778899999999999999999999987543 4
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||++|++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred cEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 59999999999999999764 4599999999999999999999999999999999999999999999999999865431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 169 ~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~ 224 (311)
T 3ork_A 169 SGN------------------------SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP 224 (311)
T ss_dssp -------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccc------------------------ccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 110 01122345799999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 900 QKTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
......+.......+. ...++.++.+||.+||..||.+||+ ..+++.|+|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~ 279 (311)
T 3ork_A 225 VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQ----TAAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChh----hHHHHHHHHHHH
Confidence 8777777766543332 2447889999999999999999999 888899998764
No 115
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-41 Score=383.01 Aligned_cols=265 Identities=26% Similarity=0.353 Sum_probs=220.9
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|++++.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...+..|+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 101 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESD-DDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYL 101 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCS-SCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCC-CchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEE
Confidence 3578999999999999999999999999999999987542 334445667889999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 102 v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 102 VFEFVDHTILDDLELFP--NGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp EEECCSEEHHHHHHHST--TCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EEecCCcchHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 99999999998887654 359999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
.......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+...
T Consensus 179 --------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~ 232 (331)
T 4aaa_A 179 --------------------------EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232 (331)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred --------------------------cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH
Confidence 112345689999999999875 78899999999999999999999999988777
Q ss_pred HHHHHHhC-------------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 902 TFANILHK-------------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 902 ~~~~i~~~-------------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
.+..+... ....+. ...++..+.+||.+||..||.+||| +.++|+||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp 308 (331)
T 4aaa_A 233 QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPF----CAELLHHD 308 (331)
T ss_dssp HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCC----GGGGGGSH
T ss_pred HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCC----HHHHhcCc
Confidence 66655431 111111 1246788999999999999999999 89999999
Q ss_pred CccCCChhh
Q 001902 953 FFKGVNWAL 961 (998)
Q Consensus 953 ~f~~~~~~~ 961 (998)
||+...+..
T Consensus 309 ~f~~~~~~~ 317 (331)
T 4aaa_A 309 FFQMDGFAE 317 (331)
T ss_dssp HHHGGGHHH
T ss_pred hhccCChhh
Confidence 999876643
No 116
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.4e-40 Score=374.18 Aligned_cols=255 Identities=24% Similarity=0.384 Sum_probs=211.9
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEee--CCe
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQT--KTH 739 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~--~~~ 739 (998)
+.++|++++.||+|+||.||+|.+..+++.||+|++... ....+.+|+.+++.++ ||||+++++++.. ...
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~------~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~ 107 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV------KKKKIKREIKILENLRGGPNIITLADIVKDPVSRT 107 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC------CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCC
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc------chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCc
Confidence 457899999999999999999999999999999998743 2366888999999996 9999999999987 678
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC-cEEEEeccCccccC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-HVSLTDFDLSCLTS 818 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-~vkL~DFG~a~~~~ 818 (998)
.++||||+++++|.+++.. +++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++....
T Consensus 108 ~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~ 182 (330)
T 3nsz_A 108 PALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH 182 (330)
T ss_dssp EEEEEECCCCCCHHHHGGG-----CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eEEEEeccCchhHHHHHHh-----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcC
Confidence 9999999999999999854 89999999999999999999999999999999999999777 89999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.. .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus 183 ~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~ 234 (330)
T 3nsz_A 183 PG----------------------------QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHG 234 (330)
T ss_dssp TT----------------------------CCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred CC----------------------------CccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 11 11234578999999999987 67899999999999999999999999543
Q ss_pred -ChHHHHHHHHh-------------CCCCC----------------------CCCCCCcHHHHHHHHHccccCccCcCCC
Q 001902 898 -TRQKTFANILH-------------KDLKF----------------------PSSTPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 898 -~~~~~~~~i~~-------------~~~~~----------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
+....+..+.. ..... ......+.++.+||.+||+.||.+|||
T Consensus 235 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt- 313 (330)
T 3nsz_A 235 HDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLT- 313 (330)
T ss_dssp SSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCC-
T ss_pred CchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCC-
Confidence 33332222211 11111 111226889999999999999999999
Q ss_pred hhcHHHHHcCCCccCCChh
Q 001902 942 HEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~~~~ 960 (998)
+.++|+||||+.+.+.
T Consensus 314 ---a~e~l~hp~f~~~~~~ 329 (330)
T 3nsz_A 314 ---AREAMEHPYFYTVVKD 329 (330)
T ss_dssp ---HHHHHTSGGGTTCC--
T ss_pred ---HHHHhcCccHhhhccC
Confidence 9999999999997653
No 117
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5e-41 Score=380.55 Aligned_cols=260 Identities=24% Similarity=0.377 Sum_probs=214.4
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCccceeEEEeeCCe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTH 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~ 739 (998)
+..+.|++++.||+|+||.||+|.+ .+++.||+|++.... ........+.+|+.+++.++| +||+++++++...+.
T Consensus 6 ~~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~ 83 (343)
T 3dbq_A 6 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 83 (343)
T ss_dssp SSSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred eecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccc-cchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCE
Confidence 4567899999999999999999998 568999999997653 244556788899999999976 999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 84 ~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~ 159 (343)
T 3dbq_A 84 IYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 159 (343)
T ss_dssp EEEEECC-CSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--
T ss_pred EEEEEeC-CCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCc
Confidence 9999995 488999999875 4599999999999999999999999999999999999997 78999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----------CCCCChhHHHHHHHHHHHHH
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~~sDIwSlG~il~eLl 888 (998)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 160 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell 214 (343)
T 3dbq_A 160 DTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 214 (343)
T ss_dssp -----------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred ccc-------------------------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence 110 012234579999999999965 67888999999999999999
Q ss_pred cCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 889 YGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 889 tG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+|..||.+... ...+..+.............+..+.+||.+||..||.+||| +.++|+||||+.
T Consensus 215 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt----~~e~l~hp~~~~ 279 (343)
T 3dbq_A 215 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQI 279 (343)
T ss_dssp HSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHS
T ss_pred hCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCC----HHHHHhCccccc
Confidence 99999987543 34455555544444444456788999999999999999999 999999999985
No 118
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=4e-41 Score=373.54 Aligned_cols=263 Identities=25% Similarity=0.447 Sum_probs=222.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++...+..|+|
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 94 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK---SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIM 94 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC---CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEE
Confidence 46899999999999999999999999999999998754 233456788899999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 95 ~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~----- 168 (302)
T 2j7t_A 95 IEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNL----- 168 (302)
T ss_dssp EECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHH-----
T ss_pred EEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccc-----
Confidence 9999999999988753 2459999999999999999999999999999999999999999999999999874311
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh-----cCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII-----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l-----~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
..........||+.|+|||++ .+..++.++|||||||++|+|++|..||...+
T Consensus 169 ----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 226 (302)
T 2j7t_A 169 ----------------------KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN 226 (302)
T ss_dssp ----------------------HHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC
T ss_pred ----------------------ccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC
Confidence 000112345799999999998 36678899999999999999999999999988
Q ss_pred hHHHHHHHHhCCCCC-CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 899 RQKTFANILHKDLKF-PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~-~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
....+..+.....+. .....++..+.+||.+||..||.+||| +.++++||||+.+.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 286 (302)
T 2j7t_A 227 PMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPS----AAQLLEHPFVSSITSNK 286 (302)
T ss_dssp HHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCC----HHHHTTSTTTTTCCCCH
T ss_pred HHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCC----HHHHhcChHHhhhccch
Confidence 887777777664432 233456889999999999999999999 99999999999987753
No 119
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=2.1e-41 Score=380.44 Aligned_cols=270 Identities=21% Similarity=0.357 Sum_probs=210.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
.++|++++.||+|+||.||+|.+..+|+.||+|++.... .......+.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN--RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS--TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC--chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 357999999999999999999999999999999997542 3445677899999999999999999999985533
Q ss_pred ----------------------------------------------------eEEEEEecCCCCchhHHHhhCCC-CCCC
Q 001902 739 ----------------------------------------------------HVCLITDYCPGGELFLLLDRQPT-KVLK 765 (998)
Q Consensus 739 ----------------------------------------------------~~~lV~E~~~ggsL~~~l~~~~~-~~l~ 765 (998)
++++|||||++++|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 48999999999999999986432 2356
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCccccc
Q 001902 766 EDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMA 845 (998)
Q Consensus 766 ~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (998)
...++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++............ ....
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~---------------~~~~ 227 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV---------------LTPM 227 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccc---------------cccc
Confidence 6678999999999999999999999999999999999999999999999765422111000 0000
Q ss_pred ccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHH
Q 001902 846 EPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQ 925 (998)
Q Consensus 846 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~ 925 (998)
.........+||+.|+|||++.+..++.++|||||||++|+|++|..|+.. .......+.....+. .....+..+.+
T Consensus 228 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~ 304 (332)
T 3qd2_B 228 PAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL-LFTQKYPQEHM 304 (332)
T ss_dssp ----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH-HHHHHCHHHHH
T ss_pred cccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc-ccccCChhHHH
Confidence 011233456799999999999999999999999999999999998776532 122222232222111 11224567899
Q ss_pred HHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 926 LMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 926 Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
||.+||..||.+||| +.++++||||+++
T Consensus 305 li~~~l~~~p~~Rps----~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 305 MVQDMLSPSPTERPE----ATDIIENAIFENL 332 (332)
T ss_dssp HHHHHHCSSGGGSCC----HHHHHHSTTCCCC
T ss_pred HHHHHccCCCCcCCC----HHHHhhchhhhcC
Confidence 999999999999999 9999999999874
No 120
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=6.4e-41 Score=383.90 Aligned_cols=260 Identities=26% Similarity=0.401 Sum_probs=218.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE---
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV--- 740 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~--- 740 (998)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccc-cchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 378999999999999999999999999999999997643 3444567788999999999999999999999876654
Q ss_pred ---EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 741 ---CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 741 ---~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
|+||||+. ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~ 194 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 194 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC---
T ss_pred eeEEEEEcccc-ccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCccccc
Confidence 99999995 788888743 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. .....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 195 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 244 (371)
T 4exu_A 195 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 244 (371)
T ss_dssp -----------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cc------------------------------CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCC
Confidence 21 1224578999999999987 6789999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCC-----------------------CCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKDLK-----------------------FPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~-----------------------~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+...... .+. ....+..+.+||.+||+.||.+||| +.+
T Consensus 245 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e 320 (371)
T 4exu_A 245 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQ 320 (371)
T ss_dssp SSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCC----HHH
T ss_pred CChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCC----HHH
Confidence 8877777666541100 000 1245789999999999999999999 999
Q ss_pred HHcCCCccCCChhhhh
Q 001902 948 IKKHPFFKGVNWALVR 963 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~~ 963 (998)
+|+||||+.+......
T Consensus 321 ll~hp~f~~~~~~~~~ 336 (371)
T 4exu_A 321 ALTHPFFEPFRDPEEE 336 (371)
T ss_dssp HHTSGGGTTTCCGGGC
T ss_pred HhcCcccccCCCcccc
Confidence 9999999987665543
No 121
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.7e-41 Score=371.31 Aligned_cols=262 Identities=25% Similarity=0.377 Sum_probs=208.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
++..++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+..+...++.++||||+++++++...+..
T Consensus 3 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~ 81 (290)
T 3fme_A 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN-SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDV 81 (290)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---C-HHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSE
T ss_pred cccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccC-cHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCE
Confidence 3556899999999999999999999999999999999975422 222333344455567888999999999999999999
Q ss_pred EEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 741 CLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
|+||||++ ++|.+++.. .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++...
T Consensus 82 ~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 160 (290)
T 3fme_A 82 WICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160 (290)
T ss_dssp EEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC------
T ss_pred EEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCcccc
Confidence 99999995 588777754 2345699999999999999999999998 9999999999999999999999999998553
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh----cCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l----~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
... .......||+.|+|||++ .+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 212 (290)
T 3fme_A 161 VDD----------------------------VAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212 (290)
T ss_dssp -------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCS
T ss_pred ccc----------------------------ccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 211 111234699999999996 456788899999999999999999999
Q ss_pred CCC-CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 894 FRG-KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 894 f~~-~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
|.. ......+................+..+.+||.+||..||.+||| +.++++||||+.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt----~~e~l~hp~f~~ 272 (290)
T 3fme_A 213 YDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTL 272 (290)
T ss_dssp SCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHH
T ss_pred ccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcC----HHHHHhCccccc
Confidence 986 44455555566555444444567899999999999999999999 999999999985
No 122
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=9.7e-41 Score=381.34 Aligned_cols=260 Identities=23% Similarity=0.364 Sum_probs=217.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~ 738 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.++++++||||+++++++... .
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 103 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF--EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMK 103 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT--TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCC
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc--cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccc
Confidence 36899999999999999999999999999999998753 2344557788999999999999999999999754 4
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||++ ++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 104 ~~~iv~e~~~-~~L~~~l~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 104 DVYIVQDLME-TDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp CEEEEEECCS-EEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEcccC-cCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 7899999995 6999998763 49999999999999999999999999999999999999999999999999996543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
.... ........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 180 ~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 235 (364)
T 3qyz_A 180 PDHD------------------------HTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 235 (364)
T ss_dssp GGGC------------------------BCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCC------------------------ccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCC
Confidence 1110 0111234579999999998755 55899999999999999999999999998
Q ss_pred ChHHHHHHHHhCCC----------------------CCCC-------CCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 898 TRQKTFANILHKDL----------------------KFPS-------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 898 ~~~~~~~~i~~~~~----------------------~~~~-------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
+....+..+..... +.+. ....+..+.+||.+||..||.+||| +.++
T Consensus 236 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e~ 311 (364)
T 3qyz_A 236 HYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE----VEQA 311 (364)
T ss_dssp SGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCC----HHHH
T ss_pred ChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCC----HHHH
Confidence 87776666543100 0000 1345788999999999999999999 9999
Q ss_pred HcCCCccCC
Q 001902 949 KKHPFFKGV 957 (998)
Q Consensus 949 L~Hp~f~~~ 957 (998)
|+||||+..
T Consensus 312 l~hp~~~~~ 320 (364)
T 3qyz_A 312 LAHPYLEQY 320 (364)
T ss_dssp HTSGGGTTT
T ss_pred hcCcchhhc
Confidence 999999986
No 123
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.2e-41 Score=394.05 Aligned_cols=263 Identities=32% Similarity=0.499 Sum_probs=211.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-----hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-----RNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-----~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.++|.+.+.||+|+||.||+|.+..+++.||+|++.+..... ......+.+|+.+|++++||||+++++++.. +
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~-~ 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA-E 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-S
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-C
Confidence 468999999999999999999999999999999998654321 1223357789999999999999999999854 5
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cEEEEeccCcc
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HVSLTDFDLSC 815 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~vkL~DFG~a~ 815 (998)
..|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++.
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~ 290 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 290 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred ceEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence 579999999999999998764 4599999999999999999999999999999999999997544 59999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---CCCCChhHHHHHHHHHHHHHcCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---AGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
..... ......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+
T Consensus 291 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~ 342 (419)
T 3i6u_A 291 ILGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP 342 (419)
T ss_dssp SCC---------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred ecCCC----------------------------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence 54311 11234579999999999864 567789999999999999999999
Q ss_pred CCCCCChH-HHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 893 PFRGKTRQ-KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 893 Pf~~~~~~-~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
||.+.... .....+......++. ....+..+.+||.+||..||.+||| +.++|+||||+..++..
T Consensus 343 pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~e~l~hp~~~~~~~~~ 410 (419)
T 3i6u_A 343 PFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMKR 410 (419)
T ss_dssp SSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHHSGGGCCHHHHH
T ss_pred CCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcC----HHHHhCCcccCChhHHH
Confidence 99875443 333444444443322 2456889999999999999999999 99999999999877654
No 124
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.3e-41 Score=385.03 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=216.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCccceeEEEeeCCe
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTKTH 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~~~ 739 (998)
+....|++++.||+|+||.||+|.+.. ++.||+|++..... .......+.+|+.+++.+. ||||+++++++...+.
T Consensus 53 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~-~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~ 130 (390)
T 2zmd_A 53 VKGRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEA-DNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQY 130 (390)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred ccCCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccc-cHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCE
Confidence 344579999999999999999999854 89999999976532 4456678899999999996 5999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+||||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++.....
T Consensus 131 ~~lv~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~ 206 (390)
T 2zmd_A 131 IYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQP 206 (390)
T ss_dssp EEEEEE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--
T ss_pred EEEEEe-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccC
Confidence 999999 5589999999875 4689999999999999999999999999999999999996 68999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----------CCCCChhHHHHHHHHHHHHH
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~~sDIwSlG~il~eLl 888 (998)
... .......+||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 207 ~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell 261 (390)
T 2zmd_A 207 DTT-------------------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT 261 (390)
T ss_dssp --------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred CCc-------------------------cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence 100 011234579999999999975 36888999999999999999
Q ss_pred cCCCCCCCCC-hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 889 YGYTPFRGKT-RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 889 tG~~Pf~~~~-~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
+|..||.+.. ....+..+.......+.....+..+.+||.+||..||.+||+ +.++|+||||+...
T Consensus 262 ~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~ell~hp~~~~~~ 328 (390)
T 2zmd_A 262 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQT 328 (390)
T ss_dssp HSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHSCC
T ss_pred HCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCC----HHHHhhCcCccccC
Confidence 9999998754 345556666555444444445789999999999999999999 99999999998643
No 125
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=2.7e-41 Score=374.74 Aligned_cols=274 Identities=25% Similarity=0.404 Sum_probs=201.5
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+..++|++.+.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++...+.
T Consensus 10 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 87 (303)
T 2vwi_A 10 WSINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDE 87 (303)
T ss_dssp ---CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC------------------CCCCCCCTTBCCEEEEEESSSC
T ss_pred cccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc--chhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCC
Confidence 34667899999999999999999999988999999998875421 2335667889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhh------CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 740 VCLITDYCPGGELFLLLDR------QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~------~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
.++||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~ 167 (303)
T 2vwi_A 88 LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV 167 (303)
T ss_dssp EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHH
T ss_pred cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccc
Confidence 9999999999999999874 1235699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~ 892 (998)
+......... ..........||+.|+|||++.+ ..++.++|||||||++|+|++|..
T Consensus 168 ~~~~~~~~~~----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~ 225 (303)
T 2vwi_A 168 SAFLATGGDI----------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225 (303)
T ss_dssp HHHCC-------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred hheeccCCCc----------------------cchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCC
Confidence 8654311100 00112234579999999999876 568899999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCC--------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 893 PFRGKTRQKTFANILHKDLKFP--------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~--------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
||.................... .....+..+.+||.+||..||.+||+ +.++++||||+...+..
T Consensus 226 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 298 (303)
T 2vwi_A 226 PYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT----AAELLRHKFFQKAKNKE 298 (303)
T ss_dssp TTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCC----HHHHHTSTTC-------
T ss_pred CCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcC----HHHHhhChhhhcCCCCc
Confidence 9998877666655554432211 12346788999999999999999999 99999999999876543
No 126
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=6.8e-41 Score=390.01 Aligned_cols=259 Identities=30% Similarity=0.456 Sum_probs=211.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee------C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~ 737 (998)
..+|++++.||+|+||.||+|.+..+|+.||||++..... ...+|+.+++.++||||++++++|.. .
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-------~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~ 125 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-------FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDE 125 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-------hHHHHHHHHHHcCCCCccceeeEEeccCCCCcc
Confidence 3479999999999999999999999999999999875421 22369999999999999999998853 2
Q ss_pred CeEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-CcEEEEeccCc
Q 001902 738 THVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-GHVSLTDFDLS 814 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-g~vkL~DFG~a 814 (998)
.++++||||+++ +|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.+ +.+||+|||++
T Consensus 126 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a 204 (420)
T 1j1b_A 126 VYLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSA 204 (420)
T ss_dssp EEEEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTC
T ss_pred eeEEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhh
Confidence 347899999964 66666542 223569999999999999999999999999999999999999965 67899999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|++|
T Consensus 205 ~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~p 256 (420)
T 1j1b_A 205 KQLVRG----------------------------EPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256 (420)
T ss_dssp EECCTT----------------------------CCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred hhcccC----------------------------CCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCC
Confidence 653211 112345789999999999775 789999999999999999999999
Q ss_pred CCCCChHHHHHHHHhC-----------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 894 FRGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
|.+.+....+..++.. .+.++. ....+.++.+||.+||..||.+||| +.
T Consensus 257 f~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t----~~ 332 (420)
T 1j1b_A 257 FPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLT----PL 332 (420)
T ss_dssp SCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCC----HH
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCC----HH
Confidence 9998887777666541 122221 1235789999999999999999999 99
Q ss_pred HHHcCCCccCCChhhh
Q 001902 947 EIKKHPFFKGVNWALV 962 (998)
Q Consensus 947 elL~Hp~f~~~~~~~~ 962 (998)
++++||||+.+.+...
T Consensus 333 e~l~hp~f~~~~~~~~ 348 (420)
T 1j1b_A 333 EACAHSFFDELRDPNV 348 (420)
T ss_dssp HHHTSGGGGGGGCTTC
T ss_pred HHhCCHhhcccccccc
Confidence 9999999998765543
No 127
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.9e-40 Score=376.80 Aligned_cols=272 Identities=23% Similarity=0.346 Sum_probs=219.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC-----C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-----T 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-----~ 738 (998)
.++|++.+.||+|+||.||+|.+..+|+.||+|++... ........+.+|+.+++.++||||+++++++... .
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 87 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF--DKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFN 87 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC--SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc--ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccc
Confidence 47899999999999999999999999999999998643 2344556778999999999999999999988654 6
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 88 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 88 EVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp CEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred eEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 8999999995 699999876 349999999999999999999999999999999999999999999999999996653
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
........ ...........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.+.
T Consensus 164 ~~~~~~~~-----------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 226 (353)
T 2b9h_A 164 ESAADNSE-----------------PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGR 226 (353)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccC-----------------ccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 22111000 0000112234679999999998865 67889999999999999999999999998
Q ss_pred ChHHHHHHHHhC--C----------------------CCCCC------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 898 TRQKTFANILHK--D----------------------LKFPS------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 898 ~~~~~~~~i~~~--~----------------------~~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
+....+..+... . ...+. ....+..+.+||.+||..||.+||| +.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e 302 (353)
T 2b9h_A 227 DYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRIT----AKE 302 (353)
T ss_dssp SHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCC----HHH
T ss_pred CcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCC----HHH
Confidence 876665544321 0 00010 1246788999999999999999999 999
Q ss_pred HHcCCCccCCChhhh
Q 001902 948 IKKHPFFKGVNWALV 962 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~ 962 (998)
+|+||||+...+...
T Consensus 303 ll~hp~~~~~~~~~~ 317 (353)
T 2b9h_A 303 ALEHPYLQTYHDPND 317 (353)
T ss_dssp HHTSGGGTTTCCTTS
T ss_pred HhcCccccccCCccc
Confidence 999999999877543
No 128
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2e-40 Score=370.00 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=214.0
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+..++|++.+.||+|+||.||+|.+ +|+.||+|++..... .......+.+|+.++++++||||+++++++...+.
T Consensus 32 ~~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 108 (309)
T 3p86_A 32 MDIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDF-HAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPN 108 (309)
T ss_dssp CBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCC-SHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTC
T ss_pred ccCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCc
Confidence 356678999999999999999999987 688999999876532 44556778899999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
+++||||+++++|.+++..... ..+++..+..++.||+.||+|||++| |+||||||+|||++.++.+||+|||++..
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 188 (309)
T 3p86_A 109 LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL 188 (309)
T ss_dssp CEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----
T ss_pred eEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcc
Confidence 9999999999999999976421 23899999999999999999999999 99999999999999999999999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+
T Consensus 189 ~~~~---------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~ 241 (309)
T 3p86_A 189 KAST---------------------------FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241 (309)
T ss_dssp ----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTT
T ss_pred cccc---------------------------ccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 2211 1112345799999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.+.......+............++..+.+||.+||..||.+||| +.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~~ll~ 291 (309)
T 3p86_A 242 LNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPS----FATIMD 291 (309)
T ss_dssp SCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 88888777776554444555567899999999999999999999 666654
No 129
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=375.70 Aligned_cols=259 Identities=26% Similarity=0.405 Sum_probs=217.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH---- 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~---- 739 (998)
.++|.+.+.||+|+||.||+|.+..+|+.||+|++.... ........+.+|+.+++.++||||+++++++.....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 101 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPF-QSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 101 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTT-SSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccc-cchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccc
Confidence 368999999999999999999999999999999997642 344456778899999999999999999999987653
Q ss_pred --EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 740 --VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 740 --~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+|+||||++ ++|.+++.. .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 176 (353)
T 3coi_A 102 YDFYLVMPFMQ-TDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHA 176 (353)
T ss_dssp CCCEEEEECCS-EEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-
T ss_pred eeEEEEecccc-CCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCC
Confidence 599999995 688887743 3999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
.. ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus 177 ~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 226 (353)
T 3coi_A 177 DA------------------------------EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKG 226 (353)
T ss_dssp -------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBS
T ss_pred CC------------------------------CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 20 1123468999999999987 6788999999999999999999999999
Q ss_pred CChHHHHHHHHhCC----------------------------CCCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 897 KTRQKTFANILHKD----------------------------LKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 897 ~~~~~~~~~i~~~~----------------------------~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+....+..+.... ..+. .....+..+.+||.+||..||.+||| +.+
T Consensus 227 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt----~~e 302 (353)
T 3coi_A 227 KDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLT----AAQ 302 (353)
T ss_dssp SCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCC----HHH
T ss_pred CCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCC----HHH
Confidence 88776666554310 0011 12346889999999999999999999 999
Q ss_pred HHcCCCccCCChhhh
Q 001902 948 IKKHPFFKGVNWALV 962 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~ 962 (998)
+|+||||+.+.....
T Consensus 303 ~l~hp~f~~~~~~~~ 317 (353)
T 3coi_A 303 ALTHPFFEPFRDPEE 317 (353)
T ss_dssp HHTSGGGTTTCCGGG
T ss_pred HhcCcchhhccCccc
Confidence 999999998766544
No 130
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-40 Score=372.37 Aligned_cols=264 Identities=25% Similarity=0.423 Sum_probs=219.4
Q ss_pred ccCCcccccccCCCCceeEEEEEEc-cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC---CCCCccceeEEEe---
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELC-GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML---DHPFVPALYASFQ--- 735 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~-~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l---~h~nIv~l~~~~~--- 735 (998)
..++|++++.||+|+||.||+|.+. .+|+.||+|++....... .....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~-~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEE-GMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTT-SCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccc-cCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc
Confidence 3478999999999999999999995 678999999997543221 1122445677666665 8999999999987
Q ss_pred --eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 736 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 736 --~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
.....++||||++ ++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 88 ~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 88 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp CSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred cCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 5678999999996 6999999876656699999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 167 ~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (326)
T 1blx_A 167 ARIYSFQ----------------------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPL 218 (326)
T ss_dssp CCCCCGG----------------------------GGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccCC----------------------------CCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCC
Confidence 8543210 112345789999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCC-----CCC--------------------CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 894 FRGKTRQKTFANILHKDL-----KFP--------------------SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~-----~~~--------------------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
|.+.+....+..+..... .++ ....++..+.+||.+||..||.+||| +.++
T Consensus 219 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~ 294 (326)
T 1blx_A 219 FRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRIS----AYSA 294 (326)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCC----HHHH
T ss_pred CCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCC----HHHH
Confidence 999888777777664100 000 11346788999999999999999999 9999
Q ss_pred HcCCCccCCChh
Q 001902 949 KKHPFFKGVNWA 960 (998)
Q Consensus 949 L~Hp~f~~~~~~ 960 (998)
++||||+.+.+.
T Consensus 295 l~hp~~~~~~~~ 306 (326)
T 1blx_A 295 LSHPYFQDLERC 306 (326)
T ss_dssp HTSGGGTTCCCC
T ss_pred hcCccccccchh
Confidence 999999998764
No 131
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.2e-40 Score=379.50 Aligned_cols=263 Identities=24% Similarity=0.355 Sum_probs=203.3
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC----
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT---- 738 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~---- 738 (998)
..++|++.+.||+|+||.||+|.+..+|+.||+|++..... .......++..++.++||||+++++++...+
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~ 96 (360)
T 3e3p_A 21 EMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR----FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDR 96 (360)
T ss_dssp HHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT----CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCT
T ss_pred hccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc----ccHHHHHHHHHHHhcCCCCcccHHHhhhccccccc
Confidence 35799999999999999999999999999999999865422 2234566788888999999999999986533
Q ss_pred ---eEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCcEEEec-CCcEEEEe
Q 001902 739 ---HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQG-NGHVSLTD 810 (998)
Q Consensus 739 ---~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH--~~~IiHrDLkP~NILi~~-~g~vkL~D 810 (998)
.+++||||+++ +|...+.. .....+++..++.++.||+.||.||| ++||+||||||+|||++. ++.+||+|
T Consensus 97 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~D 175 (360)
T 3e3p_A 97 RDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCD 175 (360)
T ss_dssp TCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECC
T ss_pred cceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEee
Confidence 38999999966 54443332 23456899999999999999999999 999999999999999997 89999999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC-CCChhHHHHHHHHHHHHHc
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG-HTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~-~~~~sDIwSlG~il~eLlt 889 (998)
||++...... .......||+.|+|||++.+.. ++.++|||||||++|+|++
T Consensus 176 fg~a~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~ 227 (360)
T 3e3p_A 176 FGSAKKLSPS----------------------------EPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227 (360)
T ss_dssp CTTCBCCCTT----------------------------SCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CCCceecCCC----------------------------CCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 9998654311 1123456899999999997654 8999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCC------------------------------CCCCCCcHHHHHHHHHccccCccCcC
Q 001902 890 GYTPFRGKTRQKTFANILHKDLKF------------------------------PSSTPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~~------------------------------~~~~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
|..||.+.+....+..+....... ......+.++.+||.+||+.||.+||
T Consensus 228 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 307 (360)
T 3e3p_A 228 GEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERM 307 (360)
T ss_dssp SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccC
Confidence 999999988887777765421000 01122467899999999999999999
Q ss_pred CChhcHHHHHcCCCccCCChhhh
Q 001902 940 GSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
| +.++|+||||+.+.....
T Consensus 308 t----~~e~l~hp~f~~~~~~~~ 326 (360)
T 3e3p_A 308 K----PYEALCHPYFDELHDPAT 326 (360)
T ss_dssp C----HHHHTTSGGGGGGGCTTC
T ss_pred C----HHHHhcCccccccCCccc
Confidence 9 999999999998755444
No 132
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.4e-41 Score=377.47 Aligned_cols=262 Identities=26% Similarity=0.388 Sum_probs=217.0
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHH-HHhCCCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI-LDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~i-l~~l~h~nIv~l~~~~~~~~ 738 (998)
..+..++|++++.||+|+||.||+|.+..+|+.||||++..... ......+..|..+ ++.++||||+++++++...+
T Consensus 46 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~ 123 (340)
T 3an0_A 46 FEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVN--SQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG 123 (340)
T ss_dssp CCCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCC--CHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS
T ss_pred eEEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccC--cHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC
Confidence 45677899999999999999999999999999999999976432 2233455556655 67789999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 739 HVCLITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
.+|+||||+++ +|.+++.. .....+++..++.++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 124 ~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~ 202 (340)
T 3an0_A 124 DVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISG 202 (340)
T ss_dssp CEEEEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHH
T ss_pred cEEEEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCce
Confidence 99999999964 99888864 1345699999999999999999999987 99999999999999999999999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC----CCCCChhHHHHHHHHHHHHHcCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG----AGHTSAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~sDIwSlG~il~eLltG~ 891 (998)
..... .......||+.|+|||++.+ ..++.++|||||||++|+|++|.
T Consensus 203 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~ 254 (340)
T 3an0_A 203 YLVDS----------------------------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILR 254 (340)
T ss_dssp HHSCH----------------------------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTS
T ss_pred ecccc----------------------------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCC
Confidence 43200 01123469999999999753 47888999999999999999999
Q ss_pred CCCCCC-ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 892 TPFRGK-TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 892 ~Pf~~~-~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.||... .....+..+............++..+.+||.+||..||.+||+ +.++++||||+.
T Consensus 255 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~f~~ 316 (340)
T 3an0_A 255 FPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPT----YPELMQHPFFTL 316 (340)
T ss_dssp CSSCCCSCHHHHHHHHHHSCCCCCCGGGSCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHH
T ss_pred CCCccccchHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCCcccCcC----HHHHhcCcCccc
Confidence 999874 4455555666554333333457889999999999999999999 999999999985
No 133
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=369.46 Aligned_cols=261 Identities=27% Similarity=0.432 Sum_probs=219.9
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..+.|++++.||+|+||.||+|.+..+|+.||+|++.... ....+.+|+.+++.++||||+++++++...+.+|+
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 101 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-----DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWI 101 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-----CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-----HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence 3578999999999999999999999999999999987542 23567889999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 102 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (314)
T 3com_A 102 VMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT-- 178 (314)
T ss_dssp EEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTT--
T ss_pred EeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhh--
Confidence 99999999999999743 245999999999999999999999999999999999999999999999999998553211
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........||+.|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus 179 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~ 233 (314)
T 3com_A 179 -------------------------MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRA 233 (314)
T ss_dssp -------------------------BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred -------------------------ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 0112345799999999999999999999999999999999999999998887766
Q ss_pred HHHHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 903 FANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 903 ~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
...+..... .+......+..+.+||.+||..||.+||| +.++++||||+...+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt----~~~ll~~~~~~~~~~~ 288 (314)
T 3com_A 234 IFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRAT----ATQLLQHPFVRSAKGV 288 (314)
T ss_dssp HHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHTCCCG
T ss_pred HHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcC----HHHHHhCHHHhcCCcc
Confidence 665555432 22333446889999999999999999999 9999999999987654
No 134
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2e-40 Score=364.29 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=211.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++..+ +||||+++++++...+..++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLA-GSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCT-TSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccccc-ccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3579999999999999999999999999999999986533 333456778899999999 99999999999999999999
Q ss_pred EEecCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-----------------
Q 001902 743 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN----------------- 803 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~----------------- 803 (998)
||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~ 168 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWAS 168 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccC
Confidence 999999999999997631 2458999999999999999999999999999999999999844
Q ss_pred --CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHH
Q 001902 804 --GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWAL 880 (998)
Q Consensus 804 --g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSl 880 (998)
..+||+|||.+..... .....||+.|+|||++.+. .++.++|||||
T Consensus 169 ~~~~~kl~Dfg~~~~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~sl 217 (289)
T 1x8b_A 169 NKVMFKIGDLGHVTRISS-------------------------------PQVEEGDSRFLANEVLQENYTHLPKADIFAL 217 (289)
T ss_dssp -CCCEEECCCTTCEETTC-------------------------------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHH
T ss_pred CceEEEEcccccccccCC-------------------------------ccccCCCccccChhHhcCCCCCCchhhHHHH
Confidence 4799999999854321 1123589999999999876 56679999999
Q ss_pred HHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 881 GILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 881 G~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
||++|+|++|.+|+.... ....+.....+ .....++..+.+||.+||..||.+||| +.++++||||+..
T Consensus 218 G~il~~l~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 286 (289)
T 1x8b_A 218 ALTVVCAAGAEPLPRNGD---QWHEIRQGRLP-RIPQVLSQEFTELLKVMIHPDPERRPS----AMALVKHSVLLSA 286 (289)
T ss_dssp HHHHHHHTTCCCCCSSSH---HHHHHHTTCCC-CCSSCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTCTTC---
T ss_pred HHHHHHHhcCCCCCcchh---HHHHHHcCCCC-CCCcccCHHHHHHHHHHhCCCcccCCC----HHHHhhChHhhhh
Confidence 999999999998876543 23344444332 222357889999999999999999999 9999999999874
No 135
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.5e-40 Score=374.48 Aligned_cols=258 Identities=24% Similarity=0.404 Sum_probs=216.7
Q ss_pred cccCCcccccccCCCCceeEEEEEE-ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC------CccceeEEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVEL-CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP------FVPALYASF 734 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~-~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~------nIv~l~~~~ 734 (998)
+..++|++++.||+|+||.||+|.+ ..+++.||+|++... ......+.+|+.+++.++|+ +|+++++++
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~ 86 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV----DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF 86 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC----CchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc
Confidence 3357999999999999999999998 567999999998743 23456778899999988665 499999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec------------
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------------ 802 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~------------ 802 (998)
...+.+|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 87 ~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 87 EHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp EETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----
T ss_pred ccCCcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccc
Confidence 9999999999999 999999998876567999999999999999999999999999999999999987
Q ss_pred -------CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChh
Q 001902 803 -------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAV 875 (998)
Q Consensus 803 -------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~s 875 (998)
++.+||+|||++.... .......||+.|+|||++.+..++.++
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~ 215 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDD------------------------------EHHSTLVSTRHYRAPEVILALGWSQPC 215 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETT------------------------------SCCCSSCSCGGGCCHHHHTTSCCCTHH
T ss_pred cccccccCCCceEeeCcccccCc------------------------------cccccccCCccccChHHhhCCCCCcch
Confidence 6689999999985422 112345799999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC-----------------------------------------
Q 001902 876 DWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP----------------------------------------- 914 (998)
Q Consensus 876 DIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~----------------------------------------- 914 (998)
|||||||++|+|++|..||...+.......+.....++|
T Consensus 216 Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (339)
T 1z57_A 216 DVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFM 295 (339)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGC
T ss_pred hhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhc
Confidence 999999999999999999998887665554432111111
Q ss_pred -CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 915 -SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 915 -~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.....+..+.+||.+||..||.+||| +.++++||||+.++
T Consensus 296 ~~~~~~~~~l~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~~ 336 (339)
T 1z57_A 296 LSQDVEHERLFDLIQKMLEYDPAKRIT----LREALKHPFFDLLK 336 (339)
T ss_dssp SCCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGGG
T ss_pred ccchhhHHHHHHHHHHHhCcCcccccC----HHHHhcCHHHHHHh
Confidence 01112457889999999999999999 99999999999753
No 136
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=2.3e-40 Score=382.42 Aligned_cols=260 Identities=28% Similarity=0.445 Sum_probs=210.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC-----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT----- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~----- 738 (998)
..+|++++.||+|+||.||+|.+..++. +|+|.+..... ...+|+.+++.++||||++++++|...+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~-------~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~ 110 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR-------FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDE 110 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT-------SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSC
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc-------hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCc
Confidence 4679999999999999999999977666 77777654321 1235999999999999999999995433
Q ss_pred -eEEEEEecCCCCchhHHHh-hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEEEeccCcc
Q 001902 739 -HVCLITDYCPGGELFLLLD-RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLSC 815 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~-~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG~a~ 815 (998)
.+|+||||++++.+..+.. ......+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++
T Consensus 111 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~ 190 (394)
T 4e7w_A 111 VFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK 190 (394)
T ss_dssp EEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcc
Confidence 4889999996654433332 11235699999999999999999999999999999999999999 79999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
..... ......+||+.|+|||++.+. .++.++|||||||++|+|++|++||
T Consensus 191 ~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 242 (394)
T 4e7w_A 191 ILIAG----------------------------EPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLF 242 (394)
T ss_dssp ECCTT----------------------------CCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred cccCC----------------------------CCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 53211 112345789999999999775 5899999999999999999999999
Q ss_pred CCCChHHHHHHHHhC-----------------CCCCCC----------CCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 895 RGKTRQKTFANILHK-----------------DLKFPS----------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~-----------------~~~~~~----------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
.+.+....+..+... ...++. ....+.++.+||.+||..||.+||| +.+
T Consensus 243 ~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~e 318 (394)
T 4e7w_A 243 PGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT----AIE 318 (394)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC----HHH
T ss_pred CCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC----HHH
Confidence 999887777766541 011111 1236789999999999999999999 999
Q ss_pred HHcCCCccCCChhhhh
Q 001902 948 IKKHPFFKGVNWALVR 963 (998)
Q Consensus 948 lL~Hp~f~~~~~~~~~ 963 (998)
+++||||+.+.+....
T Consensus 319 ~l~hp~f~~~~~~~~~ 334 (394)
T 4e7w_A 319 ALCHPFFDELRTGEAR 334 (394)
T ss_dssp HHTSGGGSTTTSSCCC
T ss_pred HhcChhhhhhcccccc
Confidence 9999999998886553
No 137
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=369.71 Aligned_cols=264 Identities=24% Similarity=0.374 Sum_probs=213.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-------- 735 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-------- 735 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 86 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT---DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD 86 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC---SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC---ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccc
Confidence 47899999999999999999999999999999998753 4456678889999999999999999999873
Q ss_pred ------eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEE
Q 001902 736 ------TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSL 808 (998)
Q Consensus 736 ------~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL 808 (998)
.....|+||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||
T Consensus 87 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl 162 (320)
T 2i6l_A 87 DVGSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKI 162 (320)
T ss_dssp ----CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEE
T ss_pred ccccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEE
Confidence 4478999999996 699999865 4589999999999999999999999999999999999998 5679999
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eL 887 (998)
+|||++........ .........||+.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 163 ~Dfg~~~~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el 218 (320)
T 2i6l_A 163 GDFGLARIMDPHYS------------------------HKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218 (320)
T ss_dssp CCCTTCBCC--------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred ccCccccccCCCcc------------------------cccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHH
Confidence 99999865431100 0011233468999999999866 6788999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCCC----------------------C------CCCCCcHHHHHHHHHccccCccCcC
Q 001902 888 LYGYTPFRGKTRQKTFANILHKDLKF----------------------P------SSTPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 888 ltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------~------~~~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
++|+.||.+.+....+..+....... + ....++..+.+||.+||..||.+||
T Consensus 219 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 298 (320)
T 2i6l_A 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298 (320)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSC
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccC
Confidence 99999999988877766665432110 0 0134688999999999999999999
Q ss_pred CChhcHHHHHcCCCccCCChhhh
Q 001902 940 GSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
| +.++|+||||+...|...
T Consensus 299 t----~~ell~hp~~~~~~~p~~ 317 (320)
T 2i6l_A 299 T----AEEALSHPYMSIYSFPMD 317 (320)
T ss_dssp C----HHHHHTSHHHHTTCC---
T ss_pred C----HHHHhCCcccccccCccC
Confidence 9 999999999998877643
No 138
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=385.44 Aligned_cols=266 Identities=25% Similarity=0.382 Sum_probs=197.3
Q ss_pred CCccc-ccccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCe
Q 001902 665 QHFRP-IKPLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTH 739 (998)
Q Consensus 665 ~~y~~-~~~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~ 739 (998)
+.|.+ .++||+|+||.||+|.+. .+++.||+|++..... ...+.+|+.+|+.++||||+++++++. ....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI-----SMSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC-----CHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC-----CHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 45776 457999999999999975 5689999999875422 245778999999999999999999995 4778
Q ss_pred EEEEEecCCCCchhHHHhhC-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE----ecCCcEEE
Q 001902 740 VCLITDYCPGGELFLLLDRQ-------PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSL 808 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi----~~~g~vkL 808 (998)
+|+||||+ +++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||
T Consensus 95 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 95 VWLLFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEEEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEEEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 99999999 56888877631 12249999999999999999999999999999999999999 67789999
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEM 887 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eL 887 (998)
+|||++........ ........+||+.|+|||++.+. .++.++|||||||++|+|
T Consensus 174 ~Dfg~a~~~~~~~~------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el 229 (405)
T 3rgf_A 174 ADMGFARLFNSPLK------------------------PLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAEL 229 (405)
T ss_dssp CCTTCCC----------------------------------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHH
T ss_pred EECCCceecCCCCc------------------------ccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHH
Confidence 99999965431100 01123356799999999999874 589999999999999999
Q ss_pred HcCCCCCCCCChH---------HHHHHHHhC--CCCCCC----------------------------------CCCCcHH
Q 001902 888 LYGYTPFRGKTRQ---------KTFANILHK--DLKFPS----------------------------------STPTSLH 922 (998)
Q Consensus 888 ltG~~Pf~~~~~~---------~~~~~i~~~--~~~~~~----------------------------------~~~~s~~ 922 (998)
++|.+||.+.... ..+..+... ...... ....+..
T Consensus 230 l~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (405)
T 3rgf_A 230 LTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 309 (405)
T ss_dssp HHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSH
T ss_pred HhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHH
Confidence 9999999765442 333333321 000000 0112567
Q ss_pred HHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhhhc
Q 001902 923 AKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALVRC 964 (998)
Q Consensus 923 l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~~~ 964 (998)
+.+||.+||..||.+||| +.++|+||||+...+.....
T Consensus 310 ~~~Ll~~~L~~dP~~R~t----a~e~L~hp~f~~~~~~~~~~ 347 (405)
T 3rgf_A 310 AFHLLQKLLTMDPIKRIT----SEQAMQDPYFLEDPLPTSDV 347 (405)
T ss_dssp HHHHHHHHSCSSGGGSCC----HHHHHTSGGGTSSSCCCSST
T ss_pred HHHHHHHHccCCcccCCC----HHHHhcChhhccCCCCcccc
Confidence 899999999999999999 99999999999876654433
No 139
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=372.34 Aligned_cols=257 Identities=25% Similarity=0.333 Sum_probs=216.4
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCC---eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSG---QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~---~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
..+..++|++.+.||+|+||.||+|.+..++ ..||+|+++... .......+.+|+.+++.++||||+++++++..
T Consensus 44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 121 (325)
T 3kul_A 44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGY--TERQRRDFLSEASIMGQFDHPNIIRLEGVVTR 121 (325)
T ss_dssp CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG
T ss_pred cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 3566789999999999999999999997554 459999997542 34456778899999999999999999999999
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 200 (325)
T 3kul_A 122 GRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRV 200 (325)
T ss_dssp GGCCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEE
T ss_pred CCccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccc
Confidence 99999999999999999999754 34599999999999999999999999999999999999999999999999999966
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~ 895 (998)
....... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 201 ~~~~~~~------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 256 (325)
T 3kul_A 201 LEDDPDA------------------------AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYW 256 (325)
T ss_dssp CC----C------------------------CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cccCccc------------------------eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcc
Confidence 4321110 011223356889999999998999999999999999999998 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
+.........+... ...+....++..+.+||.+||..||.+|||+.++
T Consensus 257 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ei 304 (325)
T 3kul_A 257 NMTNRDVISSVEEG-YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQI 304 (325)
T ss_dssp TSCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCHHHHHHHHHcC-CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHH
Confidence 98888877776655 3444555688999999999999999999994443
No 140
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.7e-40 Score=365.43 Aligned_cols=256 Identities=28% Similarity=0.415 Sum_probs=224.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.+.|++++.||+|+||.||+|.+..+++.||+|++..... ......+.+|+.+++.++||||+++++++.....+|+|
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 98 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA--EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII 98 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC--STTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 3579999999999999999999999999999999976532 23457788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
|||+++++|.+++.. ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.......
T Consensus 99 ~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 173 (303)
T 3a7i_A 99 MEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 173 (303)
T ss_dssp EECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB--
T ss_pred EEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccc--
Confidence 999999999999865 459999999999999999999999999999999999999999999999999985532110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHH
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTF 903 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~ 903 (998)
.......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus 174 -------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~ 228 (303)
T 3a7i_A 174 -------------------------IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVL 228 (303)
T ss_dssp -------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred -------------------------cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHH
Confidence 1123457999999999999999999999999999999999999999988877777
Q ss_pred HHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 904 ANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 904 ~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
..+...... .....++..+.+||.+||..||.+||| +.++++||||..
T Consensus 229 ~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~~~~~~ 276 (303)
T 3a7i_A 229 FLIPKNNPP-TLEGNYSKPLKEFVEACLNKEPSFRPT----AKELLKHKFILR 276 (303)
T ss_dssp HHHHHSCCC-CCCSSCCHHHHHHHHHHCCSSGGGSCC----HHHHTTCHHHHH
T ss_pred HHhhcCCCC-CCccccCHHHHHHHHHHcCCChhhCcC----HHHHhhChhhhc
Confidence 666654432 223457889999999999999999999 999999999975
No 141
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.6e-40 Score=377.26 Aligned_cols=259 Identities=24% Similarity=0.414 Sum_probs=209.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc--------cChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM--------LNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~--------~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.++|++++.||+|+||.||+|.+.. |+.||+|++..... .+......+.+|+.++++++||||+++++++.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 4789999999999999999999854 99999999865322 22334578899999999999999999999984
Q ss_pred e-----CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEe
Q 001902 736 T-----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 810 (998)
Q Consensus 736 ~-----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~D 810 (998)
. ...+|+||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 100 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~D 177 (362)
T 3pg1_A 100 HFEEPAMHKLYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICD 177 (362)
T ss_dssp ECCTTTCCEEEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred eccCCCcceEEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEe
Confidence 3 347899999995 6888888754 34699999999999999999999999999999999999999999999999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHHHHHHc
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il~eLlt 889 (998)
||++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 178 fg~~~~~~~~----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~ 229 (362)
T 3pg1_A 178 FNLAREDTAD----------------------------ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFN 229 (362)
T ss_dssp TTC-------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHH
T ss_pred cCcccccccc----------------------------cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHh
Confidence 9998542211 11234578999999999987 678999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCC------------------------CCCC------CCCCcHHHHHHHHHccccCccCcC
Q 001902 890 GYTPFRGKTRQKTFANILHKDL------------------------KFPS------STPTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~------------------------~~~~------~~~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
|..||.+.+....+..+..... ..+. ....+..+.+||.+||..||.+||
T Consensus 230 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 309 (362)
T 3pg1_A 230 RKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309 (362)
T ss_dssp SSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCC
Confidence 9999999887777666643100 0010 123577899999999999999999
Q ss_pred CChhcHHHHHcCCCccCC
Q 001902 940 GSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 940 t~~~~a~elL~Hp~f~~~ 957 (998)
| +.++|+||||+.+
T Consensus 310 t----~~ell~hp~f~~~ 323 (362)
T 3pg1_A 310 S----TEQALRHPYFESL 323 (362)
T ss_dssp C----HHHHHTSGGGTTT
T ss_pred C----HHHHHcCchhhhc
Confidence 9 9999999999986
No 142
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=5.6e-40 Score=375.87 Aligned_cols=258 Identities=20% Similarity=0.312 Sum_probs=217.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-------cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
.+..++|++.+.||+|+||.||+|.+. .++..||+|+++... .......+.+|+.+++.+ +||||+++++
T Consensus 77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpnIv~~~~ 154 (370)
T 2psq_A 77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLLG 154 (370)
T ss_dssp BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTC--BHHHHHHHHHHHHHHHHSCCCTTBCCEEE
T ss_pred cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCc--CHHHHHHHHHHHHHHHHhcCCCCEeeEEE
Confidence 455678999999999999999999975 346689999997642 345567889999999999 8999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcE
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENV 798 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NI 798 (998)
++...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+||
T Consensus 155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 234 (370)
T 2psq_A 155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV 234 (370)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence 9999999999999999999999998643 23488999999999999999999999999999999999
Q ss_pred EEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 799 LLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 799 Li~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
|++.+|.+||+|||++........ ........||+.|+|||++.+..++.++|||
T Consensus 235 ll~~~~~~kl~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvw 289 (370)
T 2psq_A 235 LVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDVW 289 (370)
T ss_dssp EECTTCCEEECCCSSCEETTCCCT-------------------------TCTTTTTTSCGGGCCHHHHHTCCCCHHHHHH
T ss_pred EECCCCCEEEccccCCcccCcccc-------------------------eecccCCCcccceECHhHhcCCCCCcHHHHH
Confidence 999999999999999865431110 0112234578899999999999999999999
Q ss_pred HHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 879 ALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 879 SlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
||||++|+|++ |..||.+......+..+..+. ..+....++.++.+||.+||..||.+||+ +.++++
T Consensus 290 slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rpt----~~ell~ 357 (370)
T 2psq_A 290 SFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVE 357 (370)
T ss_dssp HHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 99999999998 999999988777776665543 23334457889999999999999999999 555554
No 143
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.3e-40 Score=366.94 Aligned_cols=260 Identities=27% Similarity=0.459 Sum_probs=225.0
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV 743 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++++++||||+++++++...+..|+|
T Consensus 21 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGB-SSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEeccccc-chHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 4689999999999999999999999999999999976533 233456788999999999999999999999999999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC---CcEEEEeccCccccCCC
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN---GHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~---g~vkL~DFG~a~~~~~~ 820 (998)
|||+++++|.+++... ..+++..++.++.||+.||.|||++||+|+||||+||+++.+ +.+||+|||++......
T Consensus 100 ~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 100 GELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp ECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 9999999999988764 359999999999999999999999999999999999999764 47999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.......||+.|+|||++.+. ++.++|||||||++|+|++|..||.+.+..
T Consensus 178 ----------------------------~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 228 (287)
T 2wei_A 178 ----------------------------TKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEY 228 (287)
T ss_dssp ----------------------------SSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred ----------------------------CccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHH
Confidence 011233588999999998764 889999999999999999999999999888
Q ss_pred HHHHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 901 KTFANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 901 ~~~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
.....+..+...++ ....++..+.+||.+||..||.+||| +.++++||||+...+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~ 285 (287)
T 2wei_A 229 DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRIT----ATQCLEHPWIQKYSS 285 (287)
T ss_dssp HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHSHHHHHHCC
T ss_pred HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcC----HHHHhcCHHHhcccc
Confidence 88888877765443 33567899999999999999999999 999999999987654
No 144
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.1e-40 Score=384.39 Aligned_cols=254 Identities=24% Similarity=0.387 Sum_probs=208.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--------CCCccceeEEEe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--------HPFVPALYASFQ 735 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~--------h~nIv~l~~~~~ 735 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.+. |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~ 111 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA----EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFK 111 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC----CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeeccee
Confidence 57899999999999999999999999999999998743 334567788999999985 788999999987
Q ss_pred ----eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCC------
Q 001902 736 ----TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNG------ 804 (998)
Q Consensus 736 ----~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g------ 804 (998)
....+|+||||+ +++|.+.+.......+++..++.++.||+.||.|||++ ||+||||||+|||++.++
T Consensus 112 ~~~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~ 190 (397)
T 1wak_A 112 ISGVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190 (397)
T ss_dssp EEETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHH
T ss_pred ecCCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhh
Confidence 566899999999 66776666665456699999999999999999999998 999999999999999775
Q ss_pred -------------------------------------------cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCc
Q 001902 805 -------------------------------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNP 841 (998)
Q Consensus 805 -------------------------------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 841 (998)
.+||+|||++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~---------------------- 248 (397)
T 1wak_A 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK---------------------- 248 (397)
T ss_dssp HHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB----------------------
T ss_pred hhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc----------------------
Confidence 799999999855321
Q ss_pred ccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh------HHHHHHHHh--CCCC-
Q 001902 842 VFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR------QKTFANILH--KDLK- 912 (998)
Q Consensus 842 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~------~~~~~~i~~--~~~~- 912 (998)
.....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+. ...+..+.. +..+
T Consensus 249 --------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~ 320 (397)
T 1wak_A 249 --------HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPR 320 (397)
T ss_dssp --------CSCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCH
T ss_pred --------cCccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCCh
Confidence 12234799999999999999999999999999999999999999986542 222222221 1100
Q ss_pred ---------------------C----------------CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCcc
Q 001902 913 ---------------------F----------------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFK 955 (998)
Q Consensus 913 ---------------------~----------------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~ 955 (998)
. ......+..+.+||.+||+.||.+||| +.++|+||||+
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~e~l~hp~~~ 396 (397)
T 1wak_A 321 KLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRAT----AAECLRHPWLN 396 (397)
T ss_dssp HHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCC----HHHHHTSGGGG
T ss_pred HHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCC----HHHHhhCcccc
Confidence 0 001112456889999999999999999 99999999997
Q ss_pred C
Q 001902 956 G 956 (998)
Q Consensus 956 ~ 956 (998)
.
T Consensus 397 ~ 397 (397)
T 1wak_A 397 S 397 (397)
T ss_dssp C
T ss_pred C
Confidence 4
No 145
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=8.1e-42 Score=391.32 Aligned_cols=262 Identities=21% Similarity=0.268 Sum_probs=201.5
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC--CCCCcccee-------EEEe
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALY-------ASFQ 735 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~l~-------~~~~ 735 (998)
..|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 4599999999999999999999999999999999986554556667778886555555 699988755 4443
Q ss_pred eC-----------------CeEEEEEecCCCCchhHHHhhCCCCCCCHHHH------HHHHHHHHHHHHHHHHCCceecc
Q 001902 736 TK-----------------THVCLITDYCPGGELFLLLDRQPTKVLKEDAV------RFYAAEVVVALEYLHCQGIIYRD 792 (998)
Q Consensus 736 ~~-----------------~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~------~~i~~qil~aL~~LH~~~IiHrD 792 (998)
.. ..+|||||||+ ++|.+++.... ..++.... ..++.||+.||+|||++||+|||
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrD 219 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGH 219 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETT
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCc
Confidence 32 34899999997 89999998642 23455555 57779999999999999999999
Q ss_pred CCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CC
Q 001902 793 LKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AG 870 (998)
Q Consensus 793 LkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~ 870 (998)
|||+|||++.+|.+||+|||++..... ......||+.|+|||++.+ ..
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~ 269 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGT------------------------------RGPASSVPVTYAPREFLNASTAT 269 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTC------------------------------EEEGGGSCGGGCCHHHHTCSEEE
T ss_pred CCHHHEEECCCCCEEEEecceeeecCC------------------------------CccCccCCcCCcChhhccCCCCC
Confidence 999999999999999999999854320 0113357799999999987 67
Q ss_pred CCChhHHHHHHHHHHHHHcCCCCCCCCChHHH--HH-----HHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 871 HTSAVDWWALGILLYEMLYGYTPFRGKTRQKT--FA-----NILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 871 ~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~--~~-----~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
++.++|||||||++|+|++|+.||.+...... +. ........++....++..+.+||.+||+.||.+|||
T Consensus 270 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt--- 346 (371)
T 3q60_A 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLL--- 346 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCC---
T ss_pred cCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCC---
Confidence 89999999999999999999999987643210 00 001123334444567899999999999999999999
Q ss_pred cHHHHHcCCCccCCChhhh
Q 001902 944 GANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 944 ~a~elL~Hp~f~~~~~~~~ 962 (998)
+.++|+||||+.+.|...
T Consensus 347 -~~e~l~hp~f~~~~~~~~ 364 (371)
T 3q60_A 347 -PLEAMETPEFLQLQNEIS 364 (371)
T ss_dssp -HHHHTTSHHHHHHHHHHH
T ss_pred -HHHHhcCHHHHHHHHHHh
Confidence 999999999999877644
No 146
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=5.5e-42 Score=393.61 Aligned_cols=253 Identities=18% Similarity=0.163 Sum_probs=204.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH---HHHhCCCCCcccee-------EE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE---ILDMLDHPFVPALY-------AS 733 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~---il~~l~h~nIv~l~-------~~ 733 (998)
.++|++.+.||+|+||.||+|.+..+|+.||||++.............+.+|+. +++.++||||++++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 468999999999999999999998999999999998665555666788889995 45555899999998 66
Q ss_pred EeeCC-----------------eEEEEEecCCCCchhHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 001902 734 FQTKT-----------------HVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 791 (998)
Q Consensus 734 ~~~~~-----------------~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~~IiHr 791 (998)
+...+ ..||||||+ +|+|.+++..... ..+++..+..++.||+.||+|||++||+||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHr 230 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 230 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 66553 389999999 7899999986411 123348888899999999999999999999
Q ss_pred cCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC--
Q 001902 792 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-- 869 (998)
Q Consensus 792 DLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-- 869 (998)
||||+|||++.+|.+||+|||++.... ......+| +.|+|||++.+.
T Consensus 231 Dikp~NIll~~~~~~kL~DFG~a~~~~------------------------------~~~~~~~g-~~y~aPE~~~~~~~ 279 (377)
T 3byv_A 231 YLRPVDIVLDQRGGVFLTGFEHLVRDG------------------------------ARVVSSVS-RGFEPPELEARRAT 279 (377)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETT------------------------------CEEECCCC-TTCCCHHHHHHHTS
T ss_pred CCCHHHEEEcCCCCEEEEechhheecC------------------------------CcccCCCC-cCccChhhhccccc
Confidence 999999999999999999999985421 01234467 999999999887
Q ss_pred ---------CCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCC
Q 001902 870 ---------GHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLG 940 (998)
Q Consensus 870 ---------~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt 940 (998)
.++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||..||.+|||
T Consensus 280 ~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~L~~dp~~Rpt 353 (377)
T 3byv_A 280 ISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLL 353 (377)
T ss_dssp THHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGCCC
T ss_pred ccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh------hccCCCHHHHHHHHHHcCCCchhCCC
Confidence 899999999999999999999999987654333322222 22456889999999999999999999
Q ss_pred ChhcHHHHHcCCCccCCC
Q 001902 941 SHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 941 ~~~~a~elL~Hp~f~~~~ 958 (998)
+.++++||||+.++
T Consensus 354 ----~~e~l~hp~f~~~~ 367 (377)
T 3byv_A 354 ----PLQAMETPEYEQLR 367 (377)
T ss_dssp ----HHHHHTSHHHHHHH
T ss_pred ----HHHHhhChHHHHHH
Confidence 99999999998753
No 147
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1.1e-40 Score=374.21 Aligned_cols=261 Identities=33% Similarity=0.516 Sum_probs=213.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-----~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
++|++.+.||+|+||.||+|.+..+++.||+|++...... .......+.+|+.+++.++||||+++++++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 5799999999999999999999999999999999764321 1223345778999999999999999999987665
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc---EEEEeccCccc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDLSCL 816 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~---vkL~DFG~a~~ 816 (998)
.|+||||+++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||++..
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~ 166 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGN--KRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI 166 (322)
T ss_dssp EEEEEECCTTEETHHHHSTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred eEEEEecCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence 89999999999999998764 45999999999999999999999999999999999999987664 99999999855
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
.... .......||+.|+|||++. ...++.++|||||||++|+|++|..|
T Consensus 167 ~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p 218 (322)
T 2ycf_A 167 LGET----------------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218 (322)
T ss_dssp CCCC----------------------------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCS
T ss_pred cccc----------------------------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 3210 0112346999999999974 46788999999999999999999999
Q ss_pred CCCCChH-HHHHHHHhCCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 894 FRGKTRQ-KTFANILHKDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 894 f~~~~~~-~~~~~i~~~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
|...... .....+......+.. ....+..+.+||.+||..||.+||+ +.++|+||||+..++.
T Consensus 219 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~~~l~h~~~~~~~~~ 284 (322)
T 2ycf_A 219 FSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT----TEEALRHPWLQDEDMK 284 (322)
T ss_dssp SCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC----HHHHHTSGGGCCHHHH
T ss_pred CcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC----HHHHhhCcCcCCHHHH
Confidence 9875543 333344444433321 2346889999999999999999999 9999999999987664
No 148
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=2.5e-40 Score=362.81 Aligned_cols=260 Identities=25% Similarity=0.452 Sum_probs=222.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe--eCCeEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ--TKTHVC 741 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~--~~~~~~ 741 (998)
.++|++++.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++++++||||+++++++. ....+|
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 83 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSM-TEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY 83 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTC-CHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccC-CHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence 4689999999999999999999999999999999986533 3455678889999999999999999999875 467899
Q ss_pred EEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 742 LITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQG-----IIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~-----IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+||||+++++|.+++... ....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||+|||++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 999999999999999753 2345999999999999999999999999 999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
....... .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 164 ~~~~~~~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 164 RILNHDT---------------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp HHC---C---------------------------HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred eeecccc---------------------------ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 5432110 0112346899999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 895 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
...+.......+..+... +.....+..+.+||.+||..||.+||+ +.++++|+|+.+
T Consensus 217 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~~~~~~ 273 (279)
T 2w5a_A 217 TAFSQKELAGKIREGKFR-RIPYRYSDELNEIITRMLNLKDYHRPS----VEEILENPLILE 273 (279)
T ss_dssp CCSSHHHHHHHHHHTCCC-CCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHTSTTCCG
T ss_pred cccCHHHHHHHHhhcccc-cCCcccCHHHHHHHHHHcCCCcccCCC----HHHHHhChhhhh
Confidence 998887777777776542 222357889999999999999999999 999999999986
No 149
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.5e-40 Score=374.09 Aligned_cols=261 Identities=24% Similarity=0.372 Sum_probs=217.9
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCC-eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC------ccceeEEEe
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSG-QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF------VPALYASFQ 735 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n------Iv~l~~~~~ 735 (998)
..++|++++.||+|+||.||+|.+..++ +.||+|+++.. ......+..|+.+++.+.|++ ++.+++++.
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~ 92 (355)
T 2eu9_A 17 LQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV----GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN 92 (355)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE
T ss_pred ecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc----ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee
Confidence 3579999999999999999999998776 79999998743 234567778999999987655 899999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---------------
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL--------------- 800 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi--------------- 800 (998)
..+..|+||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 93 FHGHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp ETTEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eCCeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccc
Confidence 999999999999 7777777776655679999999999999999999999999999999999999
Q ss_pred ----ecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhH
Q 001902 801 ----QGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 876 (998)
Q Consensus 801 ----~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sD 876 (998)
+.++.+||+|||++.... .......||+.|+|||++.+..++.++|
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~D 221 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDH------------------------------EHHTTIVATRHYRPPEVILELGWAQPCD 221 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETT------------------------------SCCCSSCSCGGGCCHHHHTTCCCCTHHH
T ss_pred cccccCCCcEEEeecCcccccc------------------------------ccccCCcCCCcccCCeeeecCCCCCccc
Confidence 668899999999985422 1123457999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCC------------------------------------------
Q 001902 877 WWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFP------------------------------------------ 914 (998)
Q Consensus 877 IwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~------------------------------------------ 914 (998)
||||||++|+|++|..||.+.+....+..+.......|
T Consensus 222 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (355)
T 2eu9_A 222 VWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYML 301 (355)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCS
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccccccc
Confidence 99999999999999999998877665554433211111
Q ss_pred CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 915 SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 915 ~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
.....+..+.+||.+||..||.+||| +.++|+||||+++++...
T Consensus 302 ~~~~~~~~l~~li~~~L~~dP~~Rpt----~~e~l~hp~f~~~~~~~~ 345 (355)
T 2eu9_A 302 QDSLEHVQLFDLMRRMLEFDPAQRIT----LAEALLHPFFAGLTPEER 345 (355)
T ss_dssp CCSHHHHHHHHHHHHHTCSSTTTSCC----HHHHTTSGGGGGCCHHHH
T ss_pred ccchhHHHHHHHHHHHhcCChhhCcC----HHHHhcChhhcCCChhhc
Confidence 01112447889999999999999999 999999999999988655
No 150
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.4e-40 Score=371.25 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=206.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|++.+.||+|+||.||+|.+..++. .||+|++..... .......+.+|+.++++++||||+++++++...
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 97 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII-ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRS 97 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC-------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccccc-CHHHHHHHHHHHHHHHHCCCCceehhhceeecc
Confidence 3556789999999999999999999877665 899999976533 334567889999999999999999999999876
Q ss_pred CeE------EEEEecCCCCchhHHHhhCC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 738 THV------CLITDYCPGGELFLLLDRQP----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 738 ~~~------~lV~E~~~ggsL~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
... ++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+|
T Consensus 98 ~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 98 RAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp -------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEE
T ss_pred ccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEE
Confidence 654 99999999999999986431 22589999999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eL 887 (998)
|+|||++........ ........+++.|+|||.+.+..++.++|||||||++|+|
T Consensus 178 l~Dfg~a~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 232 (323)
T 3qup_A 178 VADFGLSRKIYSGDY-------------------------YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEI 232 (323)
T ss_dssp ECCCCC------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred Eeecccccccccccc-------------------------ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHH
Confidence 999999865431110 0112233578899999999999999999999999999999
Q ss_pred Hc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh---cHHHHHcCCCccCCChhhh
Q 001902 888 LY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE---GANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 888 lt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~---~a~elL~Hp~f~~~~~~~~ 962 (998)
++ |..||.+.+.......+.... ..+.....+..+.+||.+||..||.+|||+.+ .++++++|||+....+.-+
T Consensus 233 l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~~~pl 310 (323)
T 3qup_A 233 MTRGQTPYAGIENAEIYNYLIGGN-RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTSQDPL 310 (323)
T ss_dssp HTTSCCTTTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-----------
T ss_pred HhCCCCCccccChHHHHHHHhcCC-CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCCCCCC
Confidence 99 999999988888877776654 23334567889999999999999999999775 4678899999998765544
No 151
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=378.34 Aligned_cols=271 Identities=18% Similarity=0.235 Sum_probs=224.1
Q ss_pred cccccCCcccccccCCCCceeEEEEE-----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
..+..++|++++.||+|+||.||+|. +..+++.||+|++... ........+.+|+.++++++||||+++++++
T Consensus 66 ~~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~ 143 (367)
T 3l9p_A 66 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVS 143 (367)
T ss_dssp CBCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred hhcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccc--cChhhHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 34556789999999999999999999 4557889999998743 2344556788899999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---cE
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQP-----TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG---HV 806 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g---~v 806 (998)
......|+|||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.+| .+
T Consensus 144 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 144 LQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred ecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999999997642 23589999999999999999999999999999999999999555 59
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHH
Q 001902 807 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 886 (998)
Q Consensus 807 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~e 886 (998)
||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+
T Consensus 224 kL~DFG~a~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~e 278 (367)
T 3l9p_A 224 KIGDFGMARDIYRAG-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 278 (367)
T ss_dssp EECCCHHHHHHHHHS-------------------------SCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECCCcccccccccc-------------------------ccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHH
Confidence 999999985432100 0112234568999999999999999999999999999999
Q ss_pred HHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhhh
Q 001902 887 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWALV 962 (998)
Q Consensus 887 Llt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~~ 962 (998)
|++ |..||.+.+....+..+..... .+....++..+.+||.+||+.||.+||+ +.++++|.++-..+....
T Consensus 279 llt~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~eil~~l~~~~~~~~~~ 350 (367)
T 3l9p_A 279 IFSLGYMPYPSKSNQEVLEFVTSGGR-MDPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYCTQDPDVI 350 (367)
T ss_dssp HHTTSCCSSTTCCHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHHCHHHH
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCC-CCCCccCCHHHHHHHHHHcCCCHhHCcC----HHHHHHHHHHHhhChhhc
Confidence 998 9999999988888777776543 2333457889999999999999999999 889998877665444333
No 152
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.8e-40 Score=357.63 Aligned_cols=255 Identities=22% Similarity=0.355 Sum_probs=217.8
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
+.+..++|++++.||+|+||.||+|.+. +++.||+|++..... ....+.+|+.++++++||||+++++++...+.
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 79 (269)
T 4hcu_A 5 WVIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAP 79 (269)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred EEeChhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc----CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence 3456679999999999999999999985 577899999986532 23568889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 158 (269)
T 4hcu_A 80 ICLVFEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLD 158 (269)
T ss_dssp EEEEEECCTTCBHHHHHHTTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCC
T ss_pred eEEEEEeCCCCcHHHHHHhcC-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccc
Confidence 999999999999999997643 4599999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
.. ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+..
T Consensus 159 ~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~ 212 (269)
T 4hcu_A 159 DQ--------------------------YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 212 (269)
T ss_dssp HH--------------------------HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred cc--------------------------cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC
Confidence 10 011223457889999999999999999999999999999999 999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
.......+.... ........+..+.+|+.+||..||.+||+ +.++++|
T Consensus 213 ~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~ll~~ 260 (269)
T 4hcu_A 213 NSEVVEDISTGF-RLYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHTTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhcCc-cCCCCCcCCHHHHHHHHHHccCCcccCcC----HHHHHHH
Confidence 888877776653 33334456889999999999999999999 6776665
No 153
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=3.4e-40 Score=379.37 Aligned_cols=256 Identities=26% Similarity=0.424 Sum_probs=213.9
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CC-----CccceeEEEeeC
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HP-----FVPALYASFQTK 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~-----nIv~l~~~~~~~ 737 (998)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.. ......+..|+.+++.++ |+ +|+.+++++...
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK----KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS----HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc----HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 57999999999999999999999999999999998743 234566777888888884 44 499999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--HCCceeccCCCCcEEEe--cCCcEEEEeccC
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--CQGIIYRDLKPENVLLQ--GNGHVSLTDFDL 813 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--~~~IiHrDLkP~NILi~--~~g~vkL~DFG~ 813 (998)
+.+|+||||++ ++|.+++.......+++..++.++.||+.||.||| +.||+||||||+|||++ .++.+||+|||+
T Consensus 129 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 129 NHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp TEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred CceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 99999999994 69999998765566999999999999999999999 57999999999999995 478899999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
++.... .....+||+.|+|||++.+..++.++|||||||++|+|++|.+|
T Consensus 208 a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p 257 (382)
T 2vx3_A 208 SCQLGQ------------------------------RIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPL 257 (382)
T ss_dssp CEETTC------------------------------CCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ceeccc------------------------------ccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 865321 11245799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCC------------------C-------------------CCC------------------
Q 001902 894 FRGKTRQKTFANILHKDLKFP------------------S-------------------STP------------------ 918 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~------------------~-------------------~~~------------------ 918 (998)
|.+.+....+..+.......+ . ...
T Consensus 258 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 337 (382)
T 2vx3_A 258 FSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAG 337 (382)
T ss_dssp SCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTT
T ss_pred CCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccc
Confidence 999888877776654211000 0 000
Q ss_pred -------CcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 919 -------TSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 919 -------~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.+..+.+||.+||+.||.+||| +.++|+||||+...
T Consensus 338 ~~~~~~~~~~~~~dli~~mL~~dP~~Rpt----a~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 338 ESGHTVADYLKFKDLILRMLDYDPKTRIQ----PYYALQHSFFKKTA 380 (382)
T ss_dssp CTTCCHHHHHHHHHHHHHHTCSCTTTSCC----HHHHTTSGGGCC--
T ss_pred cccccchhhHHHHHHHHHhcCCChhhCCC----HHHHhcCcccccCC
Confidence 0136889999999999999999 99999999999754
No 154
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.3e-40 Score=377.00 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=217.5
Q ss_pred cccccCCcccccccCCCCceeEEEEE-----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 733 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~ 733 (998)
+.+..++|++.+.||+|+||.||+|. +..+++.||+|+++... .......+.+|+.++.++ +||||++++++
T Consensus 17 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 94 (359)
T 3vhe_A 17 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGA 94 (359)
T ss_dssp HBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcC--CHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence 34667899999999999999999999 45567999999997542 344557789999999999 78999999999
Q ss_pred EeeCC-eEEEEEecCCCCchhHHHhhCCC---------------------------------------------------
Q 001902 734 FQTKT-HVCLITDYCPGGELFLLLDRQPT--------------------------------------------------- 761 (998)
Q Consensus 734 ~~~~~-~~~lV~E~~~ggsL~~~l~~~~~--------------------------------------------------- 761 (998)
+...+ .+++|||||++++|.+++.....
T Consensus 95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
T 3vhe_A 95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 174 (359)
T ss_dssp ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence 88754 58999999999999999976432
Q ss_pred -------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 762 -------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 762 -------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~------ 248 (359)
T 3vhe_A 175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD------ 248 (359)
T ss_dssp ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT------
T ss_pred hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeeccccc------
Confidence 1289999999999999999999999999999999999999999999999999965421111
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 907 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~ 907 (998)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+......+...+
T Consensus 249 -------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~ 309 (359)
T 3vhe_A 249 -------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309 (359)
T ss_dssp -------------------CEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHH
T ss_pred -------------------chhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHH
Confidence 112234568999999999999999999999999999999998 999999877666555555
Q ss_pred hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 908 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 908 ~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+.....+.++.+||.+||..||.+||| +.++++|
T Consensus 310 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 349 (359)
T 3vhe_A 310 KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 349 (359)
T ss_dssp HHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHccCChhhCCC----HHHHHHH
Confidence 544444445567899999999999999999999 7777765
No 155
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.5e-39 Score=366.14 Aligned_cols=273 Identities=21% Similarity=0.256 Sum_probs=217.4
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++.+.||+|+||.||+|.+..+|+.||+|++..... ...+.+|+.+++.+ +||||+++++++...+.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 79 (330)
T 2izr_A 5 LMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR-----APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKY 79 (330)
T ss_dssp CEETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS-----SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTE
T ss_pred EEEcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc-----hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCc
Confidence 4456789999999999999999999999999999999875422 23577899999999 99999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc-----EEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~-----vkL~DFG~a 814 (998)
.|+||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 80 ~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a 157 (330)
T 2izr_A 80 NAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157 (330)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTC
T ss_pred cEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccc
Confidence 99999999 99999999864 346999999999999999999999999999999999999998887 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.......... ..+........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 158 ~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf 217 (330)
T 2izr_A 158 KEYIDPETKK--------------------HIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217 (330)
T ss_dssp EESBCTTTCC--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred eeeecCCCCc--------------------cccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCc
Confidence 7543211100 01112335678999999999999999999999999999999999999999
Q ss_pred CCCC---hHHHHHHHHhCCCCCCC---CCCCcHHHHHHHHHccccCccCcCCChhcHHHH------HcCCCccCCChhh
Q 001902 895 RGKT---RQKTFANILHKDLKFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI------KKHPFFKGVNWAL 961 (998)
Q Consensus 895 ~~~~---~~~~~~~i~~~~~~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el------L~Hp~f~~~~~~~ 961 (998)
.+.+ ....+..+.......+. ....+ ++.+||..||..||.+||++.++...+ +...+...++|..
T Consensus 218 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 295 (330)
T 2izr_A 218 QGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRKGYMFDYEYDWIG 295 (330)
T ss_dssp TTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCCSCCCTTTT
T ss_pred cccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCccCCC
Confidence 8743 33444554433222221 11233 899999999999999999955433222 2244555678863
No 156
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-40 Score=367.19 Aligned_cols=257 Identities=25% Similarity=0.401 Sum_probs=210.8
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC--e
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--H 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~ 739 (998)
...++|++.+.||+|+||.||+|.+..+++.||+|++...... .....+.+|+.+++.++||||+++++++.... .
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 83 (319)
T 4euu_A 6 TSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL--RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH 83 (319)
T ss_dssp CSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG--SCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred CCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc--chHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence 3457899999999999999999999999999999999864322 23466778999999999999999999998655 8
Q ss_pred EEEEEecCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE----ecCCcEEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi----~~~g~vkL~DFG~a 814 (998)
.|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a 163 (319)
T 4euu_A 84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA 163 (319)
T ss_dssp EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence 899999999999999997642 2339999999999999999999999999999999999999 77788999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc--------CCCCCChhHHHHHHHHHHH
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--------GAGHTSAVDWWALGILLYE 886 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--------~~~~~~~sDIwSlG~il~e 886 (998)
...... .......||+.|+|||++. +..++.++|||||||++|+
T Consensus 164 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~e 215 (319)
T 4euu_A 164 RELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215 (319)
T ss_dssp EECCTT----------------------------CCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHH
T ss_pred eecCCC----------------------------CceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHH
Confidence 654311 1123456999999999986 5778899999999999999
Q ss_pred HHcCCCCCCCCC----hHHHHHHHHhCCC-------------------CCCCCC----CCcHHHHHHHHHccccCccCcC
Q 001902 887 MLYGYTPFRGKT----RQKTFANILHKDL-------------------KFPSST----PTSLHAKQLMYRLLHRDPKSRL 939 (998)
Q Consensus 887 LltG~~Pf~~~~----~~~~~~~i~~~~~-------------------~~~~~~----~~s~~l~~Ll~~~L~~dP~~Rp 939 (998)
|++|..||.... ....+..+..+.. .++... ..+..+.+||.+||..||.+||
T Consensus 216 l~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~ 295 (319)
T 4euu_A 216 AATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCW 295 (319)
T ss_dssp HHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSC
T ss_pred HHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhc
Confidence 999999997433 2445555554332 111111 2345778999999999999999
Q ss_pred CChhcHHHHHcCC
Q 001902 940 GSHEGANEIKKHP 952 (998)
Q Consensus 940 t~~~~a~elL~Hp 952 (998)
| +.++|+||
T Consensus 296 s----~~ell~h~ 304 (319)
T 4euu_A 296 G----FDQFFAET 304 (319)
T ss_dssp C----HHHHHHHH
T ss_pred c----HHHhhhcc
Confidence 9 99999986
No 157
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=358.67 Aligned_cols=263 Identities=25% Similarity=0.349 Sum_probs=213.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
...+.|.....||+|+||.||+|.+..+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..+
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 95 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER---DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIK 95 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC---CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC---chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEE
Confidence 3455677777999999999999999999999999998754 2334567889999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-CCcEEEEeccCccccCC
Q 001902 742 LITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG-NGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~-~g~vkL~DFG~a~~~~~ 819 (998)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+|+||||+|||++. ++.+||+|||++.....
T Consensus 96 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~ 175 (295)
T 2clq_A 96 IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG 175 (295)
T ss_dssp EEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC
T ss_pred EEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCC
Confidence 9999999999999998652 235778999999999999999999999999999999999997 89999999999855321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC--CCChhHHHHHHHHHHHHHcCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG--HTSAVDWWALGILLYEMLYGYTPFRGK 897 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~--~~~~sDIwSlG~il~eLltG~~Pf~~~ 897 (998)
. ........||+.|+|||++.+.. ++.++|||||||++|+|++|..||...
T Consensus 176 ~---------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 176 I---------------------------NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred C---------------------------CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 1 01123456999999999997643 788999999999999999999999764
Q ss_pred ChH-HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 898 TRQ-KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 898 ~~~-~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
... ...................+..+.+||.+||..||.+||+ +.++++||||+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~~~~~~~~~ 286 (295)
T 2clq_A 229 GEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRAC----ANDLLVDEFLKVSS 286 (295)
T ss_dssp SSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCC----HHHHHTSGGGCC--
T ss_pred CchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCC----HHHHhcChhhhhcc
Confidence 432 2222222212222223457889999999999999999999 99999999999753
No 158
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4.7e-40 Score=376.25 Aligned_cols=260 Identities=23% Similarity=0.386 Sum_probs=211.1
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-----------CCCc
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-----------HPFV 727 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-----------h~nI 727 (998)
+..+..++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++++. |+||
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i 88 (373)
T 1q8y_A 13 GEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD----KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHI 88 (373)
T ss_dssp TCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC----HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTB
T ss_pred CCcccCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC----ccchhhhhHHHHHHHHhhcccccchhccccchH
Confidence 4556678999999999999999999999999999999998753 234466778999998886 8999
Q ss_pred cceeEEEeeCC----eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEec
Q 001902 728 PALYASFQTKT----HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQG 802 (998)
Q Consensus 728 v~l~~~~~~~~----~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~ 802 (998)
+++++++...+ .+++||||+ +++|.+++.......+++..++.++.||+.||.|||++ ||+||||||+|||++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~ 167 (373)
T 1q8y_A 89 LKLLDHFNHKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI 167 (373)
T ss_dssp CCCCEEEEEEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred HHHHHHhhccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEec
Confidence 99999997654 899999999 99999999876556799999999999999999999998 9999999999999964
Q ss_pred ------CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhH
Q 001902 803 ------NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVD 876 (998)
Q Consensus 803 ------~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sD 876 (998)
.+.+||+|||++..... ......||+.|+|||++.+..++.++|
T Consensus 168 ~~~~~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~D 217 (373)
T 1q8y_A 168 VDSPENLIQIKIADLGNACWYDE------------------------------HYTNSIQTREYRSPEVLLGAPWGCGAD 217 (373)
T ss_dssp EETTTTEEEEEECCCTTCEETTB------------------------------CCCSCCSCGGGCCHHHHHTCCCCTHHH
T ss_pred cCCCcCcceEEEcccccccccCC------------------------------CCCCCCCCccccCcHHHhCCCCCchHh
Confidence 34799999999855321 112346899999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCh------HHHHHHHHhCCCCC-------------------------------------
Q 001902 877 WWALGILLYEMLYGYTPFRGKTR------QKTFANILHKDLKF------------------------------------- 913 (998)
Q Consensus 877 IwSlG~il~eLltG~~Pf~~~~~------~~~~~~i~~~~~~~------------------------------------- 913 (998)
||||||++|+|++|..||.+.+. ...+..+.......
T Consensus 218 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (373)
T 1q8y_A 218 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT 297 (373)
T ss_dssp HHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhh
Confidence 99999999999999999986542 22222222110000
Q ss_pred ---CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 914 ---PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 914 ---~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
......+..+.+||.+||+.||.+||| +.++|+||||+..
T Consensus 298 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~f~~~ 340 (373)
T 1q8y_A 298 EKYKFSKDEAKEISDFLSPMLQLDPRKRAD----AGGLVNHPWLKDT 340 (373)
T ss_dssp HTTCCCHHHHHHHHHHHGGGGCSSTTTCBC----HHHHHTCGGGTTC
T ss_pred hcccCCcchHHHHHHHHHHHhccCccccCC----HHHHhhChhhhcc
Confidence 011123567889999999999999999 9999999999985
No 159
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.4e-39 Score=355.32 Aligned_cols=252 Identities=27% Similarity=0.419 Sum_probs=208.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC-hhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-RNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+..++|++.+.||+|+||.||+|.+ ++..+|+|++....... ......+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (271)
T 3dtc_A 4 IDFAELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNL 81 (271)
T ss_dssp CCTTSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--C
T ss_pred cchhheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCce
Confidence 4567999999999999999999998 48899999987643322 23356788999999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCCCcEEEec--------CCcEEEE
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---IIYRDLKPENVLLQG--------NGHVSLT 809 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~---IiHrDLkP~NILi~~--------~g~vkL~ 809 (998)
|+||||+++++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+|||++. ++.+||+
T Consensus 82 ~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~ 158 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSG---KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT 158 (271)
T ss_dssp EEEEECCTTEEHHHHHTS---SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC
T ss_pred EEEEEcCCCCCHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc
Confidence 999999999999999864 35999999999999999999999999 999999999999986 7789999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY 889 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt 889 (998)
|||++...... ......||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 159 Dfg~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~ 209 (271)
T 3dtc_A 159 DFGLAREWHRT-----------------------------TKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLT 209 (271)
T ss_dssp CCCC------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHH
T ss_pred cCCcccccccc-----------------------------cccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHh
Confidence 99998543211 1123468999999999999999999999999999999999
Q ss_pred CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 890 GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 890 G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|..||.+.+.......+.......+....++..+.+||.+||..||.+||| +.++++|
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 267 (271)
T 3dtc_A 210 GEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPS----FTNILDQ 267 (271)
T ss_dssp CCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred CCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcC----HHHHHHH
Confidence 999999998888887777777666666778899999999999999999999 6666654
No 160
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.5e-40 Score=370.13 Aligned_cols=262 Identities=21% Similarity=0.309 Sum_probs=219.4
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYA 732 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~ 732 (998)
...+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++++ +||||+++++
T Consensus 39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 116 (344)
T 1rjb_A 39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA--DSSEREALMSELKMMTQLGSHENIVNLLG 116 (344)
T ss_dssp GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc--CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence 34566789999999999999999999973 467789999997542 233456788999999999 9999999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQPT---------------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYR 791 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHr 791 (998)
++...+..|+||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||
T Consensus 117 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~ 196 (344)
T 1rjb_A 117 ACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHR 196 (344)
T ss_dssp EECSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEET
T ss_pred EEeeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 99999999999999999999999976532 237899999999999999999999999999
Q ss_pred cCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC
Q 001902 792 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH 871 (998)
Q Consensus 792 DLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~ 871 (998)
||||+|||++.++.+||+|||++........ ........||+.|+|||++.+..+
T Consensus 197 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~ 251 (344)
T 1rjb_A 197 DLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------------------YVVRGNARLPVKWMAPESLFEGIY 251 (344)
T ss_dssp TCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------------------SEEETTEEECGGGCCHHHHHHCCC
T ss_pred CCChhhEEEcCCCcEEeCCCccCcccccCcc-------------------------ceeccCccCccCccCHHHhccCCC
Confidence 9999999999999999999999865431110 011234467889999999999999
Q ss_pred CChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 872 TSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 872 ~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+.++|||||||++|+|++ |..||.+......+..++......+.....+..+.+||.+||..||.+||| +.++++
T Consensus 252 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~ 327 (344)
T 1rjb_A 252 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPS----FPNLTS 327 (344)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcC----HHHHHH
Confidence 999999999999999998 999999887766677777666655556667899999999999999999999 777766
Q ss_pred C
Q 001902 951 H 951 (998)
Q Consensus 951 H 951 (998)
|
T Consensus 328 ~ 328 (344)
T 1rjb_A 328 F 328 (344)
T ss_dssp H
T ss_pred H
Confidence 5
No 161
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.4e-39 Score=362.89 Aligned_cols=263 Identities=21% Similarity=0.308 Sum_probs=220.8
Q ss_pred ccccccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCcccee
Q 001902 657 DSGEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALY 731 (998)
Q Consensus 657 ~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~ 731 (998)
.+...+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.+++.++||||++++
T Consensus 15 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~ 92 (314)
T 2ivs_A 15 DPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENA--SPSELRDLLSEFNVLKQVNHPHVIKLY 92 (314)
T ss_dssp CTTTBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEE
T ss_pred CcccccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCC--CHHHHHHHHHHHHHHhhCCCCceeeEE
Confidence 3445666789999999999999999999983 456899999997542 455567888999999999999999999
Q ss_pred EEEeeCCeEEEEEecCCCCchhHHHhhCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCce
Q 001902 732 ASFQTKTHVCLITDYCPGGELFLLLDRQPT----------------------KVLKEDAVRFYAAEVVVALEYLHCQGII 789 (998)
Q Consensus 732 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------------~~l~~~~~~~i~~qil~aL~~LH~~~Ii 789 (998)
+++...+..|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+
T Consensus 93 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iv 172 (314)
T 2ivs_A 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLV 172 (314)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 999999999999999999999999986432 3489999999999999999999999999
Q ss_pred eccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC
Q 001902 790 YRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA 869 (998)
Q Consensus 790 HrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 869 (998)
||||||+|||++.++.+||+|||++........ ........+|+.|+|||++.+.
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~ 227 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDS-------------------------YVKRSQGRIPVKWMAIESLFDH 227 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTSC-------------------------EECSSCCCSCGGGCCHHHHHHC
T ss_pred ccccchheEEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcccccChhhhcCC
Confidence 999999999999999999999999865431110 0112334578899999999998
Q ss_pred CCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH
Q 001902 870 GHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI 948 (998)
Q Consensus 870 ~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el 948 (998)
.++.++|||||||++|+|++ |..||.+.........+.... ..+....++..+.+||.+||..||.+||+ +.++
T Consensus 228 ~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~l 302 (314)
T 2ivs_A 228 IYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGH-RMERPDNCSEEMYRLMLQCWKQEPDKRPV----FADI 302 (314)
T ss_dssp EECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHH
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCC-cCCCCccCCHHHHHHHHHHccCChhhCcC----HHHH
Confidence 89999999999999999999 999999888777666655543 33344567899999999999999999999 6666
Q ss_pred HcC
Q 001902 949 KKH 951 (998)
Q Consensus 949 L~H 951 (998)
+++
T Consensus 303 ~~~ 305 (314)
T 2ivs_A 303 SKD 305 (314)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 162
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=5.7e-40 Score=370.84 Aligned_cols=254 Identities=26% Similarity=0.409 Sum_probs=187.6
Q ss_pred ccCCccccc-ccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee----C
Q 001902 663 NLQHFRPIK-PLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT----K 737 (998)
Q Consensus 663 ~~~~y~~~~-~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~----~ 737 (998)
..++|.+++ .||+|+||.||+|.+..+|+.||+|++.... .........++.++||||+++++++.. .
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 98 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-------KARQEVDHHWQASGGPHIVCILDVYENMHHGK 98 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-------HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-------HHHHHHHHHHHhcCCCChHHHHHHHhhccCCC
Confidence 357899966 5999999999999999999999999987531 112223344677799999999999976 5
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 814 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a 814 (998)
..+++|||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 99 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred ceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 56899999999999999998776567999999999999999999999999999999999999986 455999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
..... .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 179 ~~~~~-----------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (336)
T 3fhr_A 179 KETTQ-----------------------------NALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPF 229 (336)
T ss_dssp EEC---------------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred eeccc-----------------------------cccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 54321 1122446899999999998888999999999999999999999999
Q ss_pred CCCChHHHH----HHHHhC--CCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 895 RGKTRQKTF----ANILHK--DLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 895 ~~~~~~~~~----~~i~~~--~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
.+....... ..+... ..+.+....++..+.+||.+||..||.+||| +.++|+||||+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt----~~ell~hp~~~~ 293 (336)
T 3fhr_A 230 YSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT----ITQFMNHPWINQ 293 (336)
T ss_dssp ---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC----HHHHHHSHHHHT
T ss_pred CCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC----HHHHhcCccccc
Confidence 876544332 222222 2233344567899999999999999999999 999999999987
No 163
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.3e-39 Score=358.68 Aligned_cols=272 Identities=26% Similarity=0.458 Sum_probs=211.1
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee--------
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT-------- 736 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~-------- 736 (998)
++|++++.||+|+||.||+|.+..+++.||+|++... ......+.+|+.+++.++||||+++++++..
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT----EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE----HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc----HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 5799999999999999999999999999999998643 3455778899999999999999999998864
Q ss_pred -----CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEec
Q 001902 737 -----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDF 811 (998)
Q Consensus 737 -----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DF 811 (998)
....|+||||+++++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++.+||+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 46789999999999999999864 345888999999999999999999999999999999999999999999999
Q ss_pred cCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-CCCChhHHHHHHHHHHHHHcC
Q 001902 812 DLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-GHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 812 G~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-~~~~~sDIwSlG~il~eLltG 890 (998)
|++............. ...............||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus 161 g~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~- 226 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLD-------------SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY- 226 (303)
T ss_dssp CCCSCTTC--------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS-
T ss_pred cchhhcccccchhccc-------------cccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh-
Confidence 9986543211100000 00000111223456799999999999865 68899999999999999998
Q ss_pred CCCCCCC-ChHHHHHHHHhCCCCCCCC--CCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChhh
Q 001902 891 YTPFRGK-TRQKTFANILHKDLKFPSS--TPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWAL 961 (998)
Q Consensus 891 ~~Pf~~~-~~~~~~~~i~~~~~~~~~~--~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~~ 961 (998)
||... +.......+......++.. ...+..+.+||.+||..||.+||| +.++++||||+...+..
T Consensus 227 --p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~~~~~ 294 (303)
T 1zy4_A 227 --PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPG----ARTLLNSGWLPVKHQDE 294 (303)
T ss_dssp --CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCC----HHHHHHSSCSCCCCHHH
T ss_pred --ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcC----HHHHhCCCCcCCCChHH
Confidence 56543 3334445555444444432 345678999999999999999999 99999999999876654
No 164
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.7e-39 Score=355.42 Aligned_cols=256 Identities=23% Similarity=0.327 Sum_probs=214.8
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++++.||+|+||.||++.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+
T Consensus 18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 18 SWEIDPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM----SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp TTBCCGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CccCCHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC----CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 44567789999999999999999999885 678899999986532 2356788999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 171 (283)
T 3gen_A 93 PIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVL 171 (283)
T ss_dssp SEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBC
T ss_pred CeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccc
Confidence 999999999999999999763 2459999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||...
T Consensus 172 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~ 225 (283)
T 3gen_A 172 DDE--------------------------YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERF 225 (283)
T ss_dssp CHH--------------------------HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTS
T ss_pred ccc--------------------------cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 110 011223357889999999998899999999999999999998 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+.......+..... .......+..+.+||.+||+.||.+||| +.++++|
T Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 274 (283)
T 3gen_A 226 TNSETAEHIAQGLR-LYRPHLASEKVYTIMYSCWHEKADERPT----FKILLSN 274 (283)
T ss_dssp CHHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred ChhHHHHHHhcccC-CCCCCcCCHHHHHHHHHHccCChhHCcC----HHHHHHH
Confidence 88887777766532 3333456889999999999999999999 6666654
No 165
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.2e-39 Score=356.88 Aligned_cols=254 Identities=22% Similarity=0.304 Sum_probs=219.3
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++.+.||+|+||.||+|.+..++..||+|++... ......+.+|+.+++.++||||+++++++...+
T Consensus 7 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 7 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED----TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp TTBCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC----STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred cccccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 3456678999999999999999999999999999999998753 334567889999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++....
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 162 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMT 162 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSC
T ss_pred CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceecc
Confidence 99999999999999999988666779999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 163 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 163 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp SSS--------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 111 011223457889999999999999999999999999999999 99999988
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+.......+... ...+....++..+.+||.+||..||.+|||+.+
T Consensus 217 ~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 261 (288)
T 3kfa_A 217 DLSQVYELLEKD-YRMERPEGCPEKVYELMRACWQWNPSDRPSFAE 261 (288)
T ss_dssp CGGGHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CHHHHHHHHhcc-CCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHH
Confidence 777666655443 344444567899999999999999999999433
No 166
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=1.6e-39 Score=362.33 Aligned_cols=261 Identities=21% Similarity=0.314 Sum_probs=220.5
Q ss_pred cccccCCcccccccCCCCceeEEEEEE-----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 733 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~ 733 (998)
..+..++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.+++++ +||||++++++
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~ 95 (313)
T 1t46_A 18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA--HLTEREALMSELKVLSYLGNHMNIVNLLGA 95 (313)
T ss_dssp GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcch--hHHHHHHHHHHHHHHhhcccCCCeeeEEEE
Confidence 456678999999999999999999995 4568899999997542 334557788999999999 99999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQPT----------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~----------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
+...+..++||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~N 175 (313)
T 1t46_A 96 CTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARN 175 (313)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred EecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccce
Confidence 9999999999999999999999986532 248999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 230 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSN-------------------------YVVKGNARLPVKWMAPESIFNCVYTFESDV 230 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTT-------------------------SEECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ceeccCCCCcceeeChHHhcCCCCChHHHH
Confidence 9999999999999999865431111 011233457889999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||||++|+|++ |..||.+.................+.....+..+.+||.+||..||.+||| +.+++++
T Consensus 231 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 301 (313)
T 1t46_A 231 WSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPT----FKQIVQL 301 (313)
T ss_dssp HHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcC----HHHHHHH
Confidence 999999999998 999999877666666666555555555667899999999999999999999 6666553
No 167
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2e-39 Score=353.43 Aligned_cols=252 Identities=19% Similarity=0.299 Sum_probs=218.3
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC--
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK-- 737 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~-- 737 (998)
..+..++|++.+.||+|+||.||+|.+ +++.||+|++.... ........+.+|+.++++++||||+++++++...
T Consensus 5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 81 (271)
T 3kmu_A 5 SGIDFKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRD-WSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPA 81 (271)
T ss_dssp CCCCGGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTT-CCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTS
T ss_pred CCCCHHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCC
Confidence 345678999999999999999999998 48899999998653 2344557788999999999999999999999876
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
+..++||||+++++|.+++.......+++..+..++.||+.||.|||++| |+||||||+|||++.++.++|+|||++.
T Consensus 82 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~ 161 (271)
T 3kmu_A 82 PHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKF 161 (271)
T ss_dssp SSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCC
T ss_pred CCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEecccee
Confidence 78999999999999999998765556999999999999999999999999 9999999999999999999999999874
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCC---hhHHHHHHHHHHHHHcCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS---AVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~---~sDIwSlG~il~eLltG~~ 892 (998)
... .....||+.|+|||++.+..++. ++|||||||++|+|++|..
T Consensus 162 ~~~--------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 209 (271)
T 3kmu_A 162 SFQ--------------------------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209 (271)
T ss_dssp TTS--------------------------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSC
T ss_pred eec--------------------------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 321 12346899999999998765554 7999999999999999999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
||.+.+.......+............++..+.+||.+||..||.+||| +.++++
T Consensus 210 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~~il~ 263 (271)
T 3kmu_A 210 PFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPK----FDMIVP 263 (271)
T ss_dssp TTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHH
Confidence 999998888888877776655555678999999999999999999999 555553
No 168
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.1e-39 Score=353.31 Aligned_cols=254 Identities=22% Similarity=0.309 Sum_probs=216.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++++.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~l~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (268)
T 3sxs_A 4 ELKREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM----SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPI 78 (268)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSE
T ss_pred EechhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC----cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCce
Confidence 455679999999999999999999875 577899999976432 235678899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 79 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 157 (268)
T 3sxs_A 79 YIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDD 157 (268)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTT
T ss_pred EEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchh
Confidence 9999999999999999764 245999999999999999999999999999999999999999999999999998654311
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
. ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus 158 ~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 211 (268)
T 3sxs_A 158 Q--------------------------YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTN 211 (268)
T ss_dssp C--------------------------EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred h--------------------------hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccCh
Confidence 1 011223456788999999999889999999999999999998 9999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+...... ......+..+.+||.+||+.||.+||| +.++++|
T Consensus 212 ~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 258 (268)
T 3sxs_A 212 SEVVLKVSQGHRL-YRPHLASDTIYQIMYSCWHELPEKRPT----FQQLLSS 258 (268)
T ss_dssp HHHHHHHHTTCCC-CCCTTSCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHcCCCC-CCCCcChHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 8877777665433 233446889999999999999999999 7777765
No 169
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=364.44 Aligned_cols=264 Identities=20% Similarity=0.276 Sum_probs=210.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||+|+||.||+|.+..+++.||+|.+... +......+.+|+.++++++||||+++++++...+..+
T Consensus 7 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 83 (310)
T 3s95_A 7 FRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF---DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLN 83 (310)
T ss_dssp ECGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC---CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEE
T ss_pred eChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeE
Confidence 4467899999999999999999999999999999988643 4556678899999999999999999999999999999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 84 lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999999999874 3459999999999999999999999999999999999999999999999999997653221
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK 901 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~ 901 (998)
...... ..............+||+.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus 163 ~~~~~~-------------~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~ 229 (310)
T 3s95_A 163 TQPEGL-------------RSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRT 229 (310)
T ss_dssp ------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBC
T ss_pred cccccc-------------ccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhH
Confidence 110000 0000001122235689999999999999999999999999999999999999986532211
Q ss_pred -----HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 902 -----TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 902 -----~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
......... ....++..+.+||.+||+.||.+||| +.++++
T Consensus 230 ~~~~~~~~~~~~~~----~~~~~~~~l~~li~~~l~~dP~~Rps----~~~l~~ 275 (310)
T 3s95_A 230 MDFGLNVRGFLDRY----CPPNCPPSFFPITVRCCDLDPEKRPS----FVKLEH 275 (310)
T ss_dssp TTSSBCHHHHHHHT----CCTTCCTTHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHhhhhhcccccc----CCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 111111111 12345678999999999999999999 666654
No 170
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1e-39 Score=365.82 Aligned_cols=276 Identities=17% Similarity=0.224 Sum_probs=227.2
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 733 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~ 733 (998)
...+..++|++.+.||+|+||.||+|.+. .+++.||+|++.... .......+.+|+.+++.++||||++++++
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAA--SMRERIEFLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTS--CHHHHHHHHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEeccccc--CHHHHHHHHHHHHHHHhcCCCCEeeeEEE
Confidence 44566789999999999999999999986 457899999987542 33445678899999999999999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQP--------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH 805 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~ 805 (998)
+...+..++||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 97 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~ 176 (322)
T 1p4o_A 97 VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFT 176 (322)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCC
T ss_pred EccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCe
Confidence 999999999999999999999987521 134789999999999999999999999999999999999999999
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHH
Q 001902 806 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 806 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~ 885 (998)
+||+|||++....... .........||+.|+|||++.+..++.++|||||||++|
T Consensus 177 ~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 231 (322)
T 1p4o_A 177 VKIGDFGMTRDIYETD-------------------------YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLW 231 (322)
T ss_dssp EEECCTTCCCGGGGGG-------------------------CEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred EEECcCcccccccccc-------------------------ccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHH
Confidence 9999999985432110 001123346789999999999989999999999999999
Q ss_pred HHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC--CCccCCChhhh
Q 001902 886 EMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH--PFFKGVNWALV 962 (998)
Q Consensus 886 eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H--p~f~~~~~~~~ 962 (998)
+|++ |..||.+.+.......+...... +....++..+.+||.+||..||.+|||+.+++..|.++ ++|+.++|...
T Consensus 232 el~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~~~~~~~~~~~ 310 (322)
T 1p4o_A 232 EIATLAEQPYQGLSNEQVLRFVMEGGLL-DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVSFYYS 310 (322)
T ss_dssp HHHHTSCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHHCSTTS
T ss_pred HHHhcCCCccccCCHHHHHHHHHcCCcC-CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhccCCcccccccc
Confidence 9999 89999998888777777665432 23345788999999999999999999954444444332 88877666554
No 171
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.9e-39 Score=369.11 Aligned_cols=260 Identities=22% Similarity=0.318 Sum_probs=219.8
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcccee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 731 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~-------~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~ 731 (998)
+.+..++|++.+.||+|+||.||+|.+..+ +..||+|++... ........+.+|+.+++++ +||||++++
T Consensus 64 ~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~~hpnIv~~~ 141 (382)
T 3tt0_A 64 WELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD--ATEKDLSDLISEMEMMKMIGKHKNIINLL 141 (382)
T ss_dssp TBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT--CCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc--cCHHHHHHHHHHHHHHHHhcCCchhhhhe
Confidence 346668999999999999999999998543 368999999764 2445567888999999999 999999999
Q ss_pred EEEeeCCeEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 732 ASFQTKTHVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 732 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
+++...+.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 142 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 221 (382)
T 3tt0_A 142 GACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 221 (382)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcce
Confidence 99999999999999999999999998653 2359999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
||++.++.+||+|||++........ ........||+.|+|||++.+..++.++||
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di 276 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDY-------------------------YKKTTNGRLPVKWMAPEALFDRIYTHQSDV 276 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCT-------------------------TCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred EEEcCCCcEEEcccCcccccccccc-------------------------cccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence 9999999999999999965431110 011233467889999999999999999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||||++|+|++ |..||.+.+.......+.... .......++..+.+||.+||..||.+||| +.+++++
T Consensus 277 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 346 (382)
T 3tt0_A 277 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH-RMDKPSNCTNELYMMMRDCWHAVPSQRPT----FKQLVED 346 (382)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTC-CCCCCSSCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 999999999999 999999988877776665543 33334567899999999999999999999 6666654
No 172
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=1.9e-39 Score=359.07 Aligned_cols=274 Identities=19% Similarity=0.231 Sum_probs=217.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTH 739 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~ 739 (998)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+|+.+++.+ +|+|++.+++++.....
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~ 80 (298)
T 1csn_A 6 NVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-----DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLH 80 (298)
T ss_dssp CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-----TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTE
T ss_pred cccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-----ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCce
Confidence 455678999999999999999999999999999999987542 223567799999999 89999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc-----EEEEeccCc
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-----VSLTDFDLS 814 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~-----vkL~DFG~a 814 (998)
.|+||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++. +||+|||++
T Consensus 81 ~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~ 158 (298)
T 1csn_A 81 NVLVIDLL-GPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMV 158 (298)
T ss_dssp EEEEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTC
T ss_pred eEEEEEec-CCCHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccc
Confidence 99999999 999999998653 45999999999999999999999999999999999999987776 999999999
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.......... ..+........||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus 159 ~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 218 (298)
T 1csn_A 159 KFYRDPVTKQ--------------------HIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218 (298)
T ss_dssp EESBCTTTCC--------------------BCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccccccccc--------------------cccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence 6643221100 01112345668999999999999999999999999999999999999999
Q ss_pred CCCC---hHHHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH------HcCCCccCCChhh
Q 001902 895 RGKT---RQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI------KKHPFFKGVNWAL 961 (998)
Q Consensus 895 ~~~~---~~~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el------L~Hp~f~~~~~~~ 961 (998)
.+.+ ....+..+.......+ ....++..+.+|+.+||..||.+||++.+++..+ ++......++|..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~~~~~~~~dw~~ 297 (298)
T 1csn_A 219 QGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLNTTEDENFDWNL 297 (298)
T ss_dssp SSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTTCCSCSCCGGGC
T ss_pred chhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcCCCCCCccccCC
Confidence 8743 3444444433221111 1234688999999999999999999965543322 2344455555543
No 173
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-39 Score=365.39 Aligned_cols=258 Identities=20% Similarity=0.285 Sum_probs=217.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEc-----cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELC-----GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~-----~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+..++|++++.||+|+||.||+|.+. .+++.||+|+++... .......+.+|+.+++.++||||+++++++.
T Consensus 43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 120 (343)
T 1luf_A 43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA--SADMQADFQREAALMAEFDNPNIVKLLGVCA 120 (343)
T ss_dssp BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEecccc--CHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc
Confidence 455679999999999999999999997 356899999998642 3445677889999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQP----------------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDL 793 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDL 793 (998)
..+..|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||
T Consensus 121 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dl 200 (343)
T 1luf_A 121 VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200 (343)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCC
T ss_pred cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 9999999999999999999997642 156999999999999999999999999999999
Q ss_pred CCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCC
Q 001902 794 KPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTS 873 (998)
Q Consensus 794 kP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~ 873 (998)
||+|||++.++.+||+|||++....... .........||+.|+|||++.+..++.
T Consensus 201 kp~NIl~~~~~~~kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~t~~y~aPE~~~~~~~~~ 255 (343)
T 1luf_A 201 ATRNCLVGENMVVKIADFGLSRNIYSAD-------------------------YYKADGNDAIPIRWMPPESIFYNRYTT 255 (343)
T ss_dssp SGGGEEECGGGCEEECCCSCHHHHTGGG-------------------------CBC----CCBCGGGCCHHHHHHCCCCH
T ss_pred CcceEEECCCCeEEEeecCCCcccccCc-------------------------cccccCCCcccceecChhhhccCCcCc
Confidence 9999999999999999999986532110 001123446899999999999989999
Q ss_pred hhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 874 AVDWWALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 874 ~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++|||||||++|+|++ |..||.+.+.......+..+... +....++..+.+||.+||..||.+||+ +.++++
T Consensus 256 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~~~~ 328 (343)
T 1luf_A 256 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-ACPENCPLELYNLMRLCWSKLPADRPS----FCSIHR 328 (343)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred ccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC-CCCCCCCHHHHHHHHHHcccCcccCCC----HHHHHH
Confidence 9999999999999998 99999998888877777766542 223457889999999999999999999 555544
No 174
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.7e-39 Score=359.60 Aligned_cols=249 Identities=23% Similarity=0.307 Sum_probs=203.8
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.+++.++||||+++++++...+.+|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 35799999999999999999999999999999999987655556667888999999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 112 v~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~- 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEK- 188 (309)
T ss_dssp EEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccc-
Confidence 99999999999999874 459999999999999999999999999999999999999999999999999985432110
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHH
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKT 902 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~ 902 (998)
........|++.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus 189 -------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~ 243 (309)
T 2h34_A 189 -------------------------LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVM 243 (309)
T ss_dssp ---------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH
T ss_pred -------------------------cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHH
Confidence 0112345699999999999999999999999999999999999999988765533
Q ss_pred HHHHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcC-C
Q 001902 903 FANILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRL-G 940 (998)
Q Consensus 903 ~~~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rp-t 940 (998)
...+......+ ....++..+.+||.+||..||.+|| +
T Consensus 244 -~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s 283 (309)
T 2h34_A 244 -GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVT 283 (309)
T ss_dssp -HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSS
T ss_pred -HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHh
Confidence 33344333222 2345788999999999999999999 6
No 175
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.8e-39 Score=360.40 Aligned_cols=261 Identities=20% Similarity=0.263 Sum_probs=212.0
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..+.+..++|++.+.||+|+||.||+|.+. ..+|+|+++... ........+.+|+.++++++||||+++++++. .
T Consensus 29 ~~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~---~~~avk~~k~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~ 103 (307)
T 3lb7_A 29 YYWEIEASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVD-PTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-K 103 (307)
T ss_dssp CCCBCCTTSCCEEEEEEECSSCEEEEEESS---SEEEEEECCCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-S
T ss_pred ceEEecccceEEEeEecCCCCeEEEEEEEC---CEEEEEEEecCC-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-c
Confidence 345677889999999999999999999864 358999887532 34556678899999999999999999999775 4
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 104 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~ 182 (307)
T 3lb7_A 104 DNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVK 182 (307)
T ss_dssp SSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC-
T ss_pred CcEEEEEecCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceec
Confidence 5589999999999999999754 356999999999999999999999999999999999999999999999999998643
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|..||
T Consensus 183 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf 237 (307)
T 3lb7_A 183 SRWS-------------------------GSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237 (307)
T ss_dssp ------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 2110 011223457999999999996 567888999999999999999999999
Q ss_pred CCCChHHHHHHHHhCCCCCCC----CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCC
Q 001902 895 RGKTRQKTFANILHKDLKFPS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPF 953 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~----~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~ 953 (998)
.+.+.......+.......+. ...++..+.+||.+||..||.+||+ +.+++++.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs----~~~il~~l~ 296 (307)
T 3lb7_A 238 SHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPL----FPQILSSIE 296 (307)
T ss_dssp TTCCCHHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCC----HHHHHHHHH
T ss_pred ccCCcHHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcC----HHHHHHHHH
Confidence 987776666555544333332 2456889999999999999999999 777777644
No 176
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=8.7e-39 Score=352.15 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=210.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHH----HHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKV----HRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~----~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
.+..++|++.+.||+|+||.||+|.+..+++.||+|++........... ..+.+|+.+++.++||||+++++++..
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 94 (287)
T 4f0f_A 15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94 (287)
T ss_dssp BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT
T ss_pred hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC
Confidence 3556899999999999999999999999999999999876533322221 678899999999999999999999876
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCc-----EEEE
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGH-----VSLT 809 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~-----vkL~ 809 (998)
.. ++||||+++++|.+++... ...+++..+..++.||+.||.|||++| |+||||||+|||++.++. +||+
T Consensus 95 ~~--~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 95 PP--RMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp TT--EEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred CC--eEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 65 6999999999999988664 346999999999999999999999999 999999999999998776 9999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc--CCCCCChhHHHHHHHHHHHH
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA--GAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~--~~~~~~~sDIwSlG~il~eL 887 (998)
|||++.... .......||+.|+|||++. ...++.++|||||||++|+|
T Consensus 172 Dfg~~~~~~------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l 221 (287)
T 4f0f_A 172 DFGLSQQSV------------------------------HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTI 221 (287)
T ss_dssp CCTTCBCCS------------------------------SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHH
T ss_pred CCCcccccc------------------------------ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHH
Confidence 999985322 1123457999999999984 45678899999999999999
Q ss_pred HcCCCCCCCCChHH--HHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 888 LYGYTPFRGKTRQK--TFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 888 ltG~~Pf~~~~~~~--~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
++|..||....... ....+............++..+.+||.+||..||.+||| +.++++
T Consensus 222 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~ 282 (287)
T 4f0f_A 222 LTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH----FSYIVK 282 (287)
T ss_dssp HHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 99999998765433 344555555555555667899999999999999999999 555543
No 177
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.4e-39 Score=358.23 Aligned_cols=257 Identities=20% Similarity=0.340 Sum_probs=207.1
Q ss_pred cccccCCcccccccCCCCceeEEEEE----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.++..++|++++.||+|+||.||+|. +..+++.||+|++... .......+.+|+.++++++||||+++++++.
T Consensus 5 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 81 (295)
T 3ugc_A 5 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 81 (295)
T ss_dssp -CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred CcCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC---CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45667899999999999999999998 5678999999998754 3455677889999999999999999999985
Q ss_pred e--CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 736 T--KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 736 ~--~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
. ...+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 82 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~ 160 (295)
T 3ugc_A 82 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 160 (295)
T ss_dssp HHHHTSCEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCS
T ss_pred cCCCCceEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcc
Confidence 4 456899999999999999998753 3599999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+......... ........|+..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 161 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 161 TKVLPQDKEF------------------------FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp CC-------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred cccccCCcce------------------------eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 9654321110 0112234578889999999999999999999999999999999999
Q ss_pred CCCCChH---------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 894 FRGKTRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 894 f~~~~~~---------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|...... .............+....++..+.+||.+||..||.+|||+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 282 (295)
T 3ugc_A 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDL 282 (295)
T ss_dssp TCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred cCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 8653211 01122233334445556688999999999999999999994443
No 178
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.4e-39 Score=365.08 Aligned_cols=256 Identities=27% Similarity=0.361 Sum_probs=215.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhCC--CCCccceeEEEee
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDMLD--HPFVPALYASFQT 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~ 736 (998)
...++|++.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.+++++. |+||+++++++..
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 346789999999999999999999999999999999986543221 12234567999999996 5999999999999
Q ss_pred CCeEEEEEecCCC-CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEEEeccCc
Q 001902 737 KTHVCLITDYCPG-GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFDLS 814 (998)
Q Consensus 737 ~~~~~lV~E~~~g-gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG~a 814 (998)
.+..++||||+.+ ++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 120 ~~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~ 197 (320)
T 3a99_A 120 PDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSG 197 (320)
T ss_dssp SSEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred CCcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccc
Confidence 9999999999976 8999999764 4599999999999999999999999999999999999999 7899999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCC-CChhHHHHHHHHHHHHHcCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGH-TSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~-~~~sDIwSlG~il~eLltG~~P 893 (998)
...... ......||+.|+|||++.+..+ +.++|||||||++|+|++|..|
T Consensus 198 ~~~~~~-----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~p 248 (320)
T 3a99_A 198 ALLKDT-----------------------------VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIP 248 (320)
T ss_dssp EECCSS-----------------------------CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred cccccc-----------------------------cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCC
Confidence 553211 1123469999999999977665 6789999999999999999999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
|.... .+......++ ..++..+.+||.+||..||.+||| +.++++||||+.....
T Consensus 249 f~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~dp~~Rps----~~~ll~hp~~~~~~~~ 303 (320)
T 3a99_A 249 FEHDE------EIIRGQVFFR--QRVSSECQHLIRWCLALRPSDRPT----FEEIQNHPWMQDVLLP 303 (320)
T ss_dssp CCSHH------HHHHCCCCCS--SCCCHHHHHHHHHHTCSSGGGSCC----HHHHHTSGGGSSCCCH
T ss_pred CCChh------hhhccccccc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcCHhhcCccCc
Confidence 97632 2334433333 346889999999999999999999 9999999999997654
No 179
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.1e-39 Score=366.48 Aligned_cols=257 Identities=21% Similarity=0.301 Sum_probs=207.7
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeE----EEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQY----FAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~----valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
..+..++|++++.||+|+||.||+|.+..+++. +|+|.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 85 (325)
T 3kex_A 8 RIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS--GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP 85 (325)
T ss_dssp CBCCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT--SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hhcCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc--cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc
Confidence 345678999999999999999999999888776 6666664321 1222345667999999999999999999886
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
.+..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 86 -~~~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 163 (325)
T 3kex_A 86 -GSSLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVAD 163 (325)
T ss_dssp -BSSEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGG
T ss_pred -CCccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCccc
Confidence 46689999999999999999764 3468999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPF 894 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf 894 (998)
....... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus 164 ~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 164 LLPPDDK-------------------------QLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp GSCCCTT-------------------------CCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccCcccc-------------------------cccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 6432111 112234568889999999999999999999999999999999 99999
Q ss_pred CCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 895 RGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 895 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
.+.........+.... ..+....++..+.+||.+||..||.+||++.++++
T Consensus 219 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~ 269 (325)
T 3kex_A 219 AGLRLAEVPDLLEKGE-RLAQPQICTIDVYMVMVKCWMIDENIRPTFKELAN 269 (325)
T ss_dssp TTSCTTHHHHHHHTTC-BCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHH
T ss_pred cccCHHHHHHHHHcCC-CCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 9887777666665543 22333346778899999999999999999444433
No 180
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1e-38 Score=355.76 Aligned_cols=258 Identities=28% Similarity=0.408 Sum_probs=207.5
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|++.+.||+|+||.||+|.+..+|+.||+|++.............+.+|+.+++.++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 35689999999999999999999999999999999986555556677888999999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhh--CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 743 ITDYCPGGELFLLLDR--QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||++......
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 9999999999999864 22356899999999999999999999999999999999999999999999999998543211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC--
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT-- 898 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~-- 898 (998)
. .......|++.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus 190 ~---------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~ 242 (310)
T 2wqm_A 190 T---------------------------TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN 242 (310)
T ss_dssp ------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CC
T ss_pred C---------------------------ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchh
Confidence 0 11223468999999999999999999999999999999999999997643
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
.......+.....+......++.++.+||.+||..||.+||+ +.+++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~il~~ 291 (310)
T 2wqm_A 243 LYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPD----VTYVYDV 291 (310)
T ss_dssp HHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCC----HHHHHHH
Confidence 334445555554443334567889999999999999999999 6666653
No 181
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.8e-39 Score=357.87 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=214.4
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCccceeEEEeeC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK 737 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~ 737 (998)
..+..++|++++.||+|+||.||+|.+. +++.||+|++.... ........+.+|+.++++++ |+||+++++++...
T Consensus 23 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~ 100 (313)
T 3cek_A 23 MSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEE-ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITD 100 (313)
T ss_dssp EEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECS
T ss_pred eeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEecccc-ccccchHHHHHHHHHHHhccccCCceEEEEEEeecC
Confidence 3455678999999999999999999984 58999999997643 24455678889999999997 59999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+..|+|||+ .+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 101 ~~~~lv~e~-~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 101 QYIYMVMEC-GNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQM 176 (313)
T ss_dssp SEEEEEECC-CSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCC-
T ss_pred CEEEEEEec-CCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-CCeEEEeeccccccc
Confidence 999999995 589999999875 4589999999999999999999999999999999999997 589999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-----------CCCCChhHHHHHHHHHHH
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-----------AGHTSAVDWWALGILLYE 886 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-----------~~~~~~sDIwSlG~il~e 886 (998)
..... ........||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 177 ~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~e 231 (313)
T 3cek_A 177 QPDTT-------------------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231 (313)
T ss_dssp --------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHH
T ss_pred cCccc-------------------------cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHH
Confidence 31110 011234569999999999976 467889999999999999
Q ss_pred HHcCCCCCCCCCh-HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 887 MLYGYTPFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 887 LltG~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
|++|..||..... ...+..+.............+..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 232 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~h~~~~~~ 299 (313)
T 3cek_A 232 MTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRIS----IPELLAHPYVQIQ 299 (313)
T ss_dssp HHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHCC
T ss_pred HHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcC----HHHHhcCccccCC
Confidence 9999999987543 34445555544443334445788999999999999999999 9999999999864
No 182
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=5.9e-39 Score=352.68 Aligned_cols=256 Identities=25% Similarity=0.359 Sum_probs=206.2
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
..+..++|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.++++++||||+++++++.
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~- 86 (281)
T 1mp8_A 10 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT- 86 (281)
T ss_dssp CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT--TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-
T ss_pred eEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc--CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-
Confidence 345678999999999999999999998653 567999998753 23455677889999999999999999999884
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 165 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------
T ss_pred cCccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccc
Confidence 56789999999999999999765 34599999999999999999999999999999999999999999999999999865
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~ 895 (998)
...... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 166 ~~~~~~--------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~ 219 (281)
T 1mp8_A 166 MEDSTY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ 219 (281)
T ss_dssp ---------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred cCcccc--------------------------cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCC
Confidence 431100 11123357889999999998899999999999999999996 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+.........+.... ..+....++..+.+||.+||..||.+||| +.++++
T Consensus 220 ~~~~~~~~~~i~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 269 (281)
T 1mp8_A 220 GVKNNDVIGRIENGE-RLPMPPNCPPTLYSLMTKCWAYDPSRRPR----FTELKA 269 (281)
T ss_dssp TCCGGGHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred cCCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHH
Confidence 988877777776553 23344567899999999999999999999 555554
No 183
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=1.8e-39 Score=372.76 Aligned_cols=257 Identities=20% Similarity=0.281 Sum_probs=215.9
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
+.+..++|++.+.||+|+||.||+|.+..+++.||+|+++.. ........+.+|+.+++.++||||+++++++...+.
T Consensus 109 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 186 (377)
T 3cbl_A 109 WVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET--LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP 186 (377)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT--SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred cEEchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc--CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence 456678999999999999999999999989999999998754 234445678889999999999999999999999999
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|+||||+++++|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~ 265 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEAD 265 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTT
T ss_pred cEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCC
Confidence 99999999999999999764 24589999999999999999999999999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 266 ~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 266 GVY-------------------------AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp SEE-------------------------ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred Cce-------------------------eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 000 001112235778999999998889999999999999999998 999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
.......+..+ ...+....++..+.+||.+||..||.+|||+.+++
T Consensus 321 ~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~ 366 (377)
T 3cbl_A 321 NQQTREFVEKG-GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIY 366 (377)
T ss_dssp HHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 77766655543 33344455788999999999999999999954443
No 184
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.4e-39 Score=362.74 Aligned_cols=266 Identities=18% Similarity=0.229 Sum_probs=218.0
Q ss_pred cccccCCcccccccCCCCceeEEEEE-----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE-----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~-----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
..+..++|++++.||+|+||.||+|. +..+++.||+|++... ........+.+|+.++++++||||+++++++
T Consensus 25 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 102 (327)
T 2yfx_A 25 KEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV--CSEQDELDFLMEALIISKFNHQNIVRCIGVS 102 (327)
T ss_dssp CBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc--cchhhHHHHHHHHHHHhhCCCCCCCeEEEEE
Confidence 34667899999999999999999999 5567889999998743 2344556788999999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcE
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPT-----KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHV 806 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~v 806 (998)
......|+||||+++++|.+++..... ..+++..++.++.||+.||.|||++||+||||||+|||++. ++.+
T Consensus 103 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 103 LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCE
T ss_pred cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999999986532 34899999999999999999999999999999999999994 4469
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHH
Q 001902 807 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYE 886 (998)
Q Consensus 807 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~e 886 (998)
||+|||++....... .........||+.|+|||++.+..++.++|||||||++|+
T Consensus 183 kl~Dfg~~~~~~~~~-------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 237 (327)
T 2yfx_A 183 KIGDFGMARDIYRAS-------------------------YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWE 237 (327)
T ss_dssp EECCCHHHHHHHC-------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred EECcccccccccccc-------------------------ccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHH
Confidence 999999985432110 0012234568999999999999899999999999999999
Q ss_pred HHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 887 MLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 887 Llt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
|++ |..||.+.........+...... .....++..+.+||.+||..||.+||+ +.++++|.|+-..
T Consensus 238 llt~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~l~~~~~ 304 (327)
T 2yfx_A 238 IFSLGYMPYPSKSNQEVLEFVTSGGRM-DPPKNCPGPVYRIMTQCWQHQPEDRPN----FAIILERIEYCTQ 304 (327)
T ss_dssp HHTTSCCSSTTCCHHHHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHHH
T ss_pred HHcCCCCCCCCcCHHHHHHHHhcCCCC-CCCCCCCHHHHHHHHHHhcCChhhCcC----HHHHHHHHHHHhc
Confidence 998 99999998887777766665432 233457889999999999999999999 9999999876543
No 185
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.4e-39 Score=355.58 Aligned_cols=249 Identities=18% Similarity=0.264 Sum_probs=207.0
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCC-------eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSG-------QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYAS 733 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~-------~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~ 733 (998)
.+..++|++.+.||+|+||.||+|.+..++ ..||+|++... .......+.+|+.+++.++||||++++++
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 80 (289)
T 4fvq_A 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA---HRNYSESFFEAASMMSKLSHKHLVLNYGV 80 (289)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG---GGGGHHHHHHHHHHHHTSCCTTBCCEEEE
T ss_pred EechhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc---cHHHHHHHHHHHHHHHhCCCCCEeEEEEE
Confidence 355678999999999999999999998776 57999998754 23445678899999999999999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc--------
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH-------- 805 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~-------- 805 (998)
+...+..++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.
T Consensus 81 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 81 CVCGDENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp ECCTTCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred EEeCCCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccce
Confidence 999999999999999999999998752 34999999999999999999999999999999999999998887
Q ss_pred EEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-CCCCChhHHHHHHHHH
Q 001902 806 VSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-AGHTSAVDWWALGILL 884 (998)
Q Consensus 806 vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-~~~~~~sDIwSlG~il 884 (998)
+||+|||++.... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 160 ~kl~Dfg~~~~~~-------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il 208 (289)
T 4fvq_A 160 IKLSDPGISITVL-------------------------------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTL 208 (289)
T ss_dssp EEECCCCSCTTTS-------------------------------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHH
T ss_pred eeeccCccccccc-------------------------------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHH
Confidence 9999999984421 1122357889999999987 6789999999999999
Q ss_pred HHHHcC-CCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 885 YEMLYG-YTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 885 ~eLltG-~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|+|++| .+||....... ...+.......+. ..+..+.+||.+||..||.+||| +.++++|
T Consensus 209 ~el~~g~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 269 (289)
T 4fvq_A 209 WEICSGGDKPLSALDSQR-KLQFYEDRHQLPA--PKAAELANLINNCMDYEPDHRPS----FRAIIRD 269 (289)
T ss_dssp HHHHTTTCCTTTTSCHHH-HHHHHHTTCCCCC--CSSCTTHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred HHHHcCCCCCccccchHH-HHHHhhccCCCCC--CCCHHHHHHHHHHcCCChhHCcC----HHHHHHH
Confidence 999995 45555544443 3344444333333 34677899999999999999999 7777665
No 186
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=5.2e-39 Score=368.16 Aligned_cols=261 Identities=21% Similarity=0.306 Sum_probs=208.8
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEc---cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELC---GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~---~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
....+..++|.+.+.||+|+||.||+|.+. .++..||+|+++... .......+.+|+.++++++||||+++++++
T Consensus 38 ~~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 38 FAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY--TEKQRRDFLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp TSCBCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC--CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE
T ss_pred HHhhcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc--CHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 344567789999999999999999999986 467789999997542 344567889999999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
...+.+|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a 194 (373)
T 2qol_A 116 TKSKPVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLG 194 (373)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC---
T ss_pred eeCCceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccc
Confidence 9999999999999999999999765 346999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~P 893 (998)
......... ........+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 195 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P 250 (373)
T 2qol_A 195 RVLEDDPEA------------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250 (373)
T ss_dssp -------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CT
T ss_pred cccccCCcc------------------------ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCC
Confidence 654321110 001112346788999999999999999999999999999997 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
|.+.+.......+... ...+....++..+.+||.+||..||.+||++.++++
T Consensus 251 ~~~~~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~ 302 (373)
T 2qol_A 251 YWEMSNQDVIKAVDEG-YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302 (373)
T ss_dssp TTTCCHHHHHHHHHTT-EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCHHHHHHHHHcC-CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence 9998887777666544 334444567889999999999999999999665433
No 187
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.3e-39 Score=363.57 Aligned_cols=260 Identities=22% Similarity=0.329 Sum_probs=219.1
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCe-----EEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEE
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQ-----YFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYAS 733 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~-----~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~ 733 (998)
..+..++|++.+.||+|+||.||+|.+..+++ .||+|++.... .......+.+|+.+++.+ +||||++++++
T Consensus 41 ~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~ 118 (333)
T 2i1m_A 41 WEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA--HADEKEALMSELKIMSHLGQHENIVNLLGA 118 (333)
T ss_dssp GBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc--ChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence 34667899999999999999999999976654 89999987542 344567788999999999 89999999999
Q ss_pred EeeCCeEEEEEecCCCCchhHHHhhCC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe
Q 001902 734 FQTKTHVCLITDYCPGGELFLLLDRQP------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ 801 (998)
Q Consensus 734 ~~~~~~~~lV~E~~~ggsL~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~ 801 (998)
+...+.+|+||||+++++|.+++.... ...++...+..++.||+.||.|||++||+||||||+|||++
T Consensus 119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT 198 (333)
T ss_dssp ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence 999999999999999999999997531 23589999999999999999999999999999999999999
Q ss_pred cCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHH
Q 001902 802 GNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALG 881 (998)
Q Consensus 802 ~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG 881 (998)
.++.+||+|||++........ ........||+.|+|||++.+..++.++||||||
T Consensus 199 ~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG 253 (333)
T 2i1m_A 199 NGHVAKIGDFGLARDIMNDSN-------------------------YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253 (333)
T ss_dssp GGGEEEBCCCGGGCCGGGCTT-------------------------SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred CCCeEEECccccccccccccc-------------------------eeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence 999999999999865321110 0112334578899999999999999999999999
Q ss_pred HHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 882 ILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 882 ~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
|++|+|++ |..||.+......+..+.......+.....+..+.+||.+||..||.+||| +.++++
T Consensus 254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 319 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPT----FQQICS 319 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred HHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcC----HHHHHH
Confidence 99999998 999999877666666666655555555567889999999999999999999 666655
No 188
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=4.3e-39 Score=362.11 Aligned_cols=257 Identities=23% Similarity=0.309 Sum_probs=205.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEE----EEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~v----alK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
.+..++|++++.||+|+||.||+|.+..+++.+ |+|.+.... .......+.+|+.++++++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 88 (327)
T 3poz_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT--SPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC---------CHHHHHHHHHHHHHCCBTTBCCEEEEEES
T ss_pred hcCHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeeccccc--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec
Confidence 455678999999999999999999998777655 666665321 23345678899999999999999999999987
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.. .++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~-~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~ 166 (327)
T 3poz_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEEECCTTCBHHHHHHHST-TSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHH
T ss_pred CC-eEEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeE
Confidence 55 789999999999999998753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~ 895 (998)
....... .......||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 167 ~~~~~~~-------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~ 221 (327)
T 3poz_A 167 LGAEEKE-------------------------YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp HTTTCC--------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCCccc-------------------------ccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence 4321110 11223457889999999999999999999999999999999 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+.........+... ...+.....+..+.+|+.+||+.||.+||+ +.++++|
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~ell~~ 272 (327)
T 3poz_A 222 GIPASEISSILEKG-ERLPQPPICTIDVYMIMVKCWMIDADSRPK----FRELIIE 272 (327)
T ss_dssp TCCGGGHHHHHHTT-CCCCCCTTBCHHHHHHHHHHTCSCGGGSCC----HHHHHHH
T ss_pred CCCHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCChhhCCC----HHHHHHH
Confidence 88776665554443 344455567889999999999999999999 5555543
No 189
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=357.14 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=203.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
+...++|++++.||+|+||.||+|.+..+|+.||+|++..... .......+..+..+++.++||||+++++++...+.+
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~ 99 (318)
T 2dyl_A 21 QAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGN-KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDV 99 (318)
T ss_dssp ECCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSC-HHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred hhhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccccc-chHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcE
Confidence 4556799999999999999999999999999999999986532 222233344455678888999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
|+||||+ ++.+..+.... ...+++..++.++.||+.||.|||++ ||+|+||||+|||++.++.+||+|||++.....
T Consensus 100 ~lv~e~~-~~~~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 100 FIAMELM-GTCAEKLKKRM-QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEEECCC-SEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEEecc-CCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 9999999 66666666543 34599999999999999999999996 999999999999999999999999999854321
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc-----CCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA-----GAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~-----~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
. .......||+.|+|||++. ...++.++|||||||++|+|++|..||
T Consensus 178 ~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 229 (318)
T 2dyl_A 178 D----------------------------KAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPY 229 (318)
T ss_dssp -------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred C----------------------------ccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCC
Confidence 1 1112346999999999994 456888999999999999999999999
Q ss_pred CCC-ChHHHHHHHHhCCC-CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 895 RGK-TRQKTFANILHKDL-KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 895 ~~~-~~~~~~~~i~~~~~-~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
... .....+..+..... .++....++..+.+||.+||..||.+||+ +.++++||||+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~h~~~~~~ 290 (318)
T 2dyl_A 230 KNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPK----YNKLLEHSFIKRY 290 (318)
T ss_dssp TTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCC----HHHHTTSHHHHHH
T ss_pred CCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcC----HHHHhhCHHHHhc
Confidence 874 45556666665543 33444557899999999999999999999 9999999999864
No 190
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=361.84 Aligned_cols=254 Identities=29% Similarity=0.421 Sum_probs=204.5
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---hHHHHHHHHHHHHHhC----CCCCccceeEEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---NKVHRACAEREILDML----DHPFVPALYASF 734 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---~~~~~~~~E~~il~~l----~h~nIv~l~~~~ 734 (998)
...++|++.+.||+|+||.||+|.+..+++.||+|++........ .....+.+|+.++.++ +|+||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 345789999999999999999999999999999999976533221 1223455689999998 899999999999
Q ss_pred eeCCeEEEEEec-CCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe-cCCcEEEEecc
Q 001902 735 QTKTHVCLITDY-CPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ-GNGHVSLTDFD 812 (998)
Q Consensus 735 ~~~~~~~lV~E~-~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~-~~g~vkL~DFG 812 (998)
...+..++|||| +.+++|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 999999999999 7899999999874 3599999999999999999999999999999999999999 88999999999
Q ss_pred CccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCC-ChhHHHHHHHHHHHHHcCC
Q 001902 813 LSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHT-SAVDWWALGILLYEMLYGY 891 (998)
Q Consensus 813 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~-~~sDIwSlG~il~eLltG~ 891 (998)
++...... ......||+.|+|||++.+..+. .++|||||||++|+|++|+
T Consensus 186 ~~~~~~~~-----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~ 236 (312)
T 2iwi_A 186 SGALLHDE-----------------------------PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGD 236 (312)
T ss_dssp SCEECCSS-----------------------------CBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred hhhhcccC-----------------------------cccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCC
Confidence 98654311 12244699999999999776664 4899999999999999999
Q ss_pred CCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCC
Q 001902 892 TPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVN 958 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~ 958 (998)
.||.... .+......++ ...+..+.+||.+||..||.+||| +.++++||||+...
T Consensus 237 ~pf~~~~------~~~~~~~~~~--~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~~~~~~~~ 291 (312)
T 2iwi_A 237 IPFERDQ------EILEAELHFP--AHVSPDCCALIRRCLAPKPSSRPS----LEEILLDPWMQTPA 291 (312)
T ss_dssp CSCCSHH------HHHHTCCCCC--TTSCHHHHHHHHHHTCSSTTTSCC----HHHHHHSTTTCC--
T ss_pred CCCCChH------HHhhhccCCc--ccCCHHHHHHHHHHccCChhhCcC----HHHHhcChhhcCch
Confidence 9997632 2334444443 346889999999999999999999 99999999999853
No 191
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1e-38 Score=347.39 Aligned_cols=254 Identities=22% Similarity=0.362 Sum_probs=216.1
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++.+.||+|+||.||+|.+. +++.||+|++..... ....+.+|+.+++.++||||+++++++...+..
T Consensus 4 ~i~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 78 (267)
T 3t9t_A 4 VIDPSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM----SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPI 78 (267)
T ss_dssp BCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB----CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred EEchhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCe
Confidence 455678999999999999999999985 678999999986532 235688899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 157 (267)
T 3t9t_A 79 CLVTEFMEHGCLSDYLRTQR-GLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD 157 (267)
T ss_dssp EEEECCCTTCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH
T ss_pred EEEEeCCCCCcHHHHHhhCc-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEcccccccccccc
Confidence 99999999999999997653 45899999999999999999999999999999999999999999999999998543210
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTR 899 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~ 899 (998)
.........|++.|+|||++.+..++.++|||||||++|+|++ |..||...+.
T Consensus 158 --------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~ 211 (267)
T 3t9t_A 158 --------------------------QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN 211 (267)
T ss_dssp --------------------------HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred --------------------------cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH
Confidence 0011223457889999999998889999999999999999999 9999999888
Q ss_pred HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 900 QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 900 ~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
......+..... .......+..+.+|+.+||..||.+||+ +.+++++
T Consensus 212 ~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~ll~~ 258 (267)
T 3t9t_A 212 SEVVEDISTGFR-LYKPRLASTHVYQIMNHCWRERPEDRPA----FSRLLRQ 258 (267)
T ss_dssp HHHHHHHHTTCC-CCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHhcCCc-CCCCccCcHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 887777766532 2333456889999999999999999999 6666653
No 192
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=3.3e-39 Score=362.76 Aligned_cols=266 Identities=23% Similarity=0.346 Sum_probs=196.0
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHH-HHHhCCCCCccceeEEEeeCC
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAERE-ILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~-il~~l~h~nIv~l~~~~~~~~ 738 (998)
..+..++|++++.||+|+||.||+|.+..+|+.||+|++.... .......+..|+. +++.++||||+++++++...+
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~ 94 (327)
T 3aln_A 17 WDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTV--DEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG 94 (327)
T ss_dssp ECCCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCC--CHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS
T ss_pred cccCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeeccc--CchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC
Confidence 3466789999999999999999999999999999999997642 2333445555665 677789999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHHC-CceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 739 HVCLITDYCPGGELFLLLDR---QPTKVLKEDAVRFYAAEVVVALEYLHCQ-GIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~LH~~-~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
..++||||++ ++|.+++.. .....+++..+..++.|++.||.|||++ ||+||||||+|||++.++.+||+|||++
T Consensus 95 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~ 173 (327)
T 3aln_A 95 DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGIS 173 (327)
T ss_dssp EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSS
T ss_pred ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCc
Confidence 9999999996 588777753 2245699999999999999999999999 9999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh----cCCCCCChhHHHHHHHHHHHHHcC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----AGAGHTSAVDWWALGILLYEMLYG 890 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l----~~~~~~~~sDIwSlG~il~eLltG 890 (998)
...... .......||+.|+|||++ .+..++.++|||||||++|+|++|
T Consensus 174 ~~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g 225 (327)
T 3aln_A 174 GQLVDS----------------------------IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225 (327)
T ss_dssp CC----------------------------------------------------------CCSHHHHHHHHHHHHHHHHS
T ss_pred eecccc----------------------------cccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHC
Confidence 553211 011233699999999998 456789999999999999999999
Q ss_pred CCCCCCCChH-HHHHHHHhCCCC-CC--CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 891 YTPFRGKTRQ-KTFANILHKDLK-FP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 891 ~~Pf~~~~~~-~~~~~i~~~~~~-~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
..||.+.... ..+..+..+..+ ++ .....+..+.+||.+||..||.+||+ +.++++||||...++.
T Consensus 226 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~hp~~~~~~~~ 295 (327)
T 3aln_A 226 RFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPK----YKELLKHPFILMYEER 295 (327)
T ss_dssp CCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCC----HHHHTTSHHHHHHHHS
T ss_pred CCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcC----HHHHHhChHHHHhHhh
Confidence 9999875432 222222222211 11 12347889999999999999999999 9999999999875543
No 193
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=8.5e-39 Score=380.07 Aligned_cols=255 Identities=22% Similarity=0.308 Sum_probs=218.9
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+...+|++.+.||+|+||.||+|.+..++..||+|+++.... ....+.+|+.+|++++||||+++++++...+
T Consensus 214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 214 KWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp CCBCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ccccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc----chHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 345667789999999999999999999998899999999976422 3567889999999999999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|||||||++++|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 290 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 369 (495)
T 1opk_A 290 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMT 369 (495)
T ss_dssp SCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCT
T ss_pred cEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceecc
Confidence 99999999999999999987655679999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 370 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 370 GDT--------------------------YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp TCC--------------------------EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011223356789999999999999999999999999999998 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
+....+..+.. ....+....++..+.+||.+||+.||.+|||+.++
T Consensus 424 ~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el 469 (495)
T 1opk_A 424 DLSQVYELLEK-DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469 (495)
T ss_dssp CGGGHHHHHHT-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHH
Confidence 87766665544 33444455678999999999999999999994443
No 194
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=4.8e-39 Score=358.98 Aligned_cols=260 Identities=24% Similarity=0.365 Sum_probs=214.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEE-----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVEL-----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASF 734 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~-----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~ 734 (998)
.+..++|++.+.||+|+||.||+|.+ ..+++.||+|++.... .......+.+|+.++.++ +||||+++++++
T Consensus 23 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 23 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA--THSEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCC--CcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 45567999999999999999999986 3567899999997642 344556788999999999 799999999998
Q ss_pred eeC-CeEEEEEecCCCCchhHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 001902 735 QTK-THVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 799 (998)
Q Consensus 735 ~~~-~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NIL 799 (998)
... ..+++||||+++++|.+++..... ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil 180 (316)
T 2xir_A 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL 180 (316)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence 765 458999999999999999986532 12889999999999999999999999999999999999
Q ss_pred EecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHH
Q 001902 800 LQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWA 879 (998)
Q Consensus 800 i~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwS 879 (998)
++.++.+||+|||++........ ........||+.|+|||++.+..++.++||||
T Consensus 181 ~~~~~~~kl~Dfg~~~~~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~s 235 (316)
T 2xir_A 181 LSEKNVVKICDFGLARDIYKDPD-------------------------YVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235 (316)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTT-------------------------SEEETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred ECCCCCEEECCCccccccccCcc-------------------------ceeccCCCcceeecCchhhccccccchhHHHH
Confidence 99999999999999865431110 01123446789999999999999999999999
Q ss_pred HHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 880 LGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 880 lG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||++|+|++ |..||.+......+...+......+.....+..+.+||.+||..||.+||| +.++++|
T Consensus 236 lG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 304 (316)
T 2xir_A 236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPT----FSELVEH 304 (316)
T ss_dssp HHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 9999999998 999998876555544444433333444557889999999999999999999 7777765
No 195
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-38 Score=373.48 Aligned_cols=252 Identities=22% Similarity=0.362 Sum_probs=215.0
Q ss_pred hccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 656 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 656 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
...++.+..++|++++.||+|+||.||++.+ .|+.||||+++... ....+.+|+.+|++++||||+++++++.
T Consensus 184 ~~~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~niv~~~~~~~ 256 (450)
T 1k9a_A 184 YRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVIV 256 (450)
T ss_dssp HHTTCBCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT-----TSHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccccccChHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch-----HHHHHHHHHHHHHhccCCCEEEEEEEEE
Confidence 3456778889999999999999999999998 47899999997542 3467889999999999999999999987
Q ss_pred eCC-eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 736 TKT-HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 736 ~~~-~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
... .+|||||||++++|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 257 ~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 257 EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp CTTSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred cCCCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 654 7999999999999999998765555899999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~P 893 (998)
..... ......+++.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 337 ~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P 386 (450)
T 1k9a_A 337 KEASS------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386 (450)
T ss_dssp EECC------------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCS
T ss_pred ccccc------------------------------cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 53210 0112257889999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
|.+.+..+....+..+ ...+....++..+.+||.+||..||.+|||+.+++
T Consensus 387 ~~~~~~~~~~~~i~~~-~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~ 437 (450)
T 1k9a_A 387 YPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLR 437 (450)
T ss_dssp STTSCTTTHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CCCCCHHHHHHHHHcC-CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 9988777777666554 33344456789999999999999999999955543
No 196
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.8e-38 Score=358.08 Aligned_cols=260 Identities=20% Similarity=0.308 Sum_probs=216.5
Q ss_pred cccccCCcccccccCCCCceeEEEEEEc-------cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCcccee
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELC-------GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALY 731 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~-------~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~ 731 (998)
..+..++|++.+.||+|+||.||+|.+. .++..||+|++.... .......+.+|+.+++++ +||||++++
T Consensus 30 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 107 (334)
T 2pvf_A 30 WEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDA--TEKDLSDLVSEMEMMKMIGKHKNIINLL 107 (334)
T ss_dssp TBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTC--CHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred ccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCC--cHHHHHHHHHHHHHHHHhhcCCCEeeEE
Confidence 3456689999999999999999999985 457889999997542 344567788999999999 999999999
Q ss_pred EEEeeCCeEEEEEecCCCCchhHHHhhCCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCc
Q 001902 732 ASFQTKTHVCLITDYCPGGELFLLLDRQPT--------------KVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPEN 797 (998)
Q Consensus 732 ~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~N 797 (998)
+++...+.+|+||||+++++|.+++..... ..++...+..++.||+.||.|||++||+||||||+|
T Consensus 108 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 187 (334)
T 2pvf_A 108 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187 (334)
T ss_dssp EEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccce
Confidence 999999999999999999999999986431 248999999999999999999999999999999999
Q ss_pred EEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 798 VLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 798 ILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
||++.++.+||+|||++........ ........+|+.|+|||++.+..++.++||
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di 242 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDY-------------------------YKKTTNGRLPVKWMAPEALFDRVYTHQSDV 242 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSS-------------------------EECCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred EEEcCCCCEEEcccccccccccccc-------------------------ccccCCCCcccceeChHHhcCCCcChHHHH
Confidence 9999999999999999865431110 011223457889999999998889999999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||||++|+|++ |..||.+.........+.... ..+....++..+.+||.+||..||.+||+ +.+++++
T Consensus 243 ~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 312 (334)
T 2pvf_A 243 WSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGH-RMDKPANCTNELYMMMRDCWHAVPSQRPT----FKQLVED 312 (334)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCC-CCCCCccCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 999999999999 999999988877777666553 22333457889999999999999999999 5555544
No 197
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.4e-38 Score=374.49 Aligned_cols=254 Identities=22% Similarity=0.318 Sum_probs=215.1
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++.+.||+|+||.||+|.+. ++..||||+++... ...+.+.+|+.+|+.++||||+++++++. .+
T Consensus 182 ~~~i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~----~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~ 255 (454)
T 1qcf_A 182 AWEIPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS----MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KE 255 (454)
T ss_dssp CSBCCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS----BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred ceeechHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC----ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CC
Confidence 44677789999999999999999999985 47889999998643 23567889999999999999999999886 56
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|+|||||++|+|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~ 335 (454)
T 1qcf_A 256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIE 335 (454)
T ss_dssp SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBC
T ss_pred ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcC
Confidence 78999999999999999976433468999999999999999999999999999999999999999999999999996532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........+++.|+|||++....++.++|||||||++|+|++ |..||.+.
T Consensus 336 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~ 389 (454)
T 1qcf_A 336 DNE--------------------------YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGM 389 (454)
T ss_dssp CHH--------------------------HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred CCc--------------------------eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 100 011123346789999999998899999999999999999999 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
+..+....+..+ ...+....++..+.+||.+||..||.+|||+.+++
T Consensus 390 ~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~ 436 (454)
T 1qcf_A 390 SNPEVIRALERG-YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQ 436 (454)
T ss_dssp CHHHHHHHHHHT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHH
Confidence 888877777654 33444556789999999999999999999955443
No 198
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9e-39 Score=352.44 Aligned_cols=260 Identities=23% Similarity=0.323 Sum_probs=210.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc-CC--eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG-SG--QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~-~~--~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|++++.||+|+||.||+|.+.. ++ ..||+|+++............+.+|+.+++.++||||+++++++...
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 93 (291)
T 1u46_A 14 LIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTP 93 (291)
T ss_dssp ECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred ccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccC
Confidence 4556789999999999999999998643 33 36999999876555556678889999999999999999999999876
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+ .++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++...
T Consensus 94 ~-~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 94 P-MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp S-CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred C-ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 5 889999999999999997642 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
...... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 172 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 227 (291)
T 1u46_A 172 PQNDDH------------------------YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 227 (291)
T ss_dssp CC-CCE------------------------EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred cccccc------------------------hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCccc
Confidence 311110 011223457889999999998889999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
.+....+..+.......+....++..+.+||.+||..||.+||| +.++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~ 277 (291)
T 1u46_A 228 LNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPT----FVALRD 277 (291)
T ss_dssp CCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred CCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcC----HHHHHH
Confidence 99888888888776666666778999999999999999999999 666665
No 199
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.2e-38 Score=346.98 Aligned_cols=257 Identities=21% Similarity=0.284 Sum_probs=215.0
Q ss_pred cccCCccccc-ccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 662 INLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~-~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
+..++|.++. .||+|+||.||+|.+. .++..||+|++... ........+.+|+.+++.++||||+++++++ ..+
T Consensus 6 ~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~ 82 (287)
T 1u59_A 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG--TEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE 82 (287)
T ss_dssp CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred ccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc--cchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence 4456788887 9999999999999863 46889999999864 2445667888999999999999999999999 456
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~ 161 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALG 161 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECT
T ss_pred CcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeec
Confidence 789999999999999999754 3459999999999999999999999999999999999999999999999999986543
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
..... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 162 ~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 162 ADDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp TCSCE------------------------ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cCcce------------------------eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 11110 011223457899999999998889999999999999999998 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+.......+..... .+....++..+.+||.+||..||.+||+ +.++++|
T Consensus 218 ~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~~l~~~ 266 (287)
T 1u59_A 218 KGPEVMAFIEQGKR-MECPPECPPELYALMSDCWIYKWEDRPD----FLTVEQR 266 (287)
T ss_dssp CTHHHHHHHHTTCC-CCCCTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred CHHHHHHHHhcCCc-CCCCCCcCHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 87777766665432 2233457899999999999999999999 7777766
No 200
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=1.2e-38 Score=358.25 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=212.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEE--EEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYF--AMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKT 738 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~v--alK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~ 738 (998)
+..++|++.+.||+|+||.||+|.+..++..+ |+|.+... ........+.+|+.+++++ +||||+++++++...+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 99 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG 99 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC--------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc--cchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC
Confidence 55679999999999999999999999888866 99988743 2334456788899999999 9999999999999999
Q ss_pred eEEEEEecCCCCchhHHHhhCC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC
Q 001902 739 HVCLITDYCPGGELFLLLDRQP--------------TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG 804 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g 804 (998)
.+|+||||+++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~ 179 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY 179 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGG
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCC
Confidence 9999999999999999997642 24699999999999999999999999999999999999999999
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
.+||+|||++..... ........+++.|+|||++.+..++.++|||||||++
T Consensus 180 ~~kL~Dfg~~~~~~~----------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 231 (327)
T 1fvr_A 180 VAKIADFGLSRGQEV----------------------------YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231 (327)
T ss_dssp CEEECCTTCEESSCE----------------------------ECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred eEEEcccCcCccccc----------------------------cccccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence 999999999853210 0111233578899999999988899999999999999
Q ss_pred HHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 885 YEMLY-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 885 ~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|+|++ |..||.+.+.......+... ...+....++..+.+||.+||..||.+||| +.++++|
T Consensus 232 ~ellt~g~~pf~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~~ 294 (327)
T 1fvr_A 232 WEIVSLGGTPYCGMTCAELYEKLPQG-YRLEKPLNCDDEVYDLMRQCWREKPYERPS----FAQILVS 294 (327)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHGGGT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHcCCCCCCCCCcHHHHHHHhhcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 99998 99999998887777766554 233334457889999999999999999999 6666654
No 201
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.8e-38 Score=350.32 Aligned_cols=256 Identities=21% Similarity=0.302 Sum_probs=199.6
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+..++..++|++.+.||+|+||.||++.+. ..+|+|+++... ........+.+|+.+++.++||||++++++. ..
T Consensus 17 ~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~ 91 (289)
T 3og7_A 17 DDWEIPDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTA-PTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TA 91 (289)
T ss_dssp -CCBCCTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CS
T ss_pred CCCccCccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccC-CCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cC
Confidence 345677889999999999999999999863 359999987543 3455667889999999999999999999955 55
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 92 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~ 170 (289)
T 3og7_A 92 PQLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEK 170 (289)
T ss_dssp SSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----
T ss_pred CccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccc
Confidence 6789999999999999999654 355999999999999999999999999999999999999999999999999998543
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.... .........||+.|+|||++. +..++.++|||||||++|+|++|..||
T Consensus 171 ~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~ 225 (289)
T 3og7_A 171 SRWS-------------------------GSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPY 225 (289)
T ss_dssp --------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred cccc-------------------------ccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCc
Confidence 2110 011223457999999999996 567788999999999999999999999
Q ss_pred CCCChHHHHHHHHh-CCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 895 RGKTRQKTFANILH-KDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 895 ~~~~~~~~~~~i~~-~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.+......+...+. ...... ....++..+.+||.+||..||.+|||+.++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 279 (289)
T 3og7_A 226 SNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRI 279 (289)
T ss_dssp SSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHH
Confidence 88766555554443 322221 123567899999999999999999994443
No 202
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=357.84 Aligned_cols=254 Identities=23% Similarity=0.307 Sum_probs=205.9
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEE----EEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYF----AMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT 736 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~v----alK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~ 736 (998)
.+..++|++++.||+|+||.||+|.+..+++.+ |+|.+... ........+.+|+.+++.++||||+++++++..
T Consensus 11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 88 (327)
T 3lzb_A 11 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA--TSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88 (327)
T ss_dssp ECCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC--SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES
T ss_pred ccCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc--cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec
Confidence 455789999999999999999999998887765 55555432 133345778899999999999999999999987
Q ss_pred CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 737 KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 737 ~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.. .++||+|+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 89 ~~-~~~v~~~~~~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~ 166 (327)
T 3lzb_A 89 ST-VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKL 166 (327)
T ss_dssp SS-EEEEECCCSSCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC---
T ss_pred CC-ceEEEEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeE
Confidence 65 789999999999999998753 4599999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFR 895 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~ 895 (998)
...... ........||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus 167 ~~~~~~-------------------------~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~ 221 (327)
T 3lzb_A 167 LGAEEK-------------------------EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221 (327)
T ss_dssp --------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccCccc-------------------------cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence 431111 011223457889999999999999999999999999999999 999999
Q ss_pred CCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 896 GKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
+.........+... ...+.....+..+.+||.+||..||.+||++.++
T Consensus 222 ~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el 269 (327)
T 3lzb_A 222 GIPASEISSILEKG-ERLPQPPICTIDVYMIMRKCWMIDADSRPKFREL 269 (327)
T ss_dssp TCCGGGHHHHHHTT-CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCHHHHHHHHHcC-CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 88777666555443 3444555678899999999999999999994433
No 203
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=2.1e-38 Score=351.54 Aligned_cols=255 Identities=22% Similarity=0.312 Sum_probs=207.1
Q ss_pred cccCCcccccccCCCCceeEEEEE----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
+....|++++.||+|+||.||+|. +..+++.||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 95 (302)
T 4e5w_A 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIVKYKGICTED 95 (302)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-
T ss_pred hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc--cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 445679999999999999999999 56789999999997543 233456788999999999999999999999876
Q ss_pred --CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 --THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 --~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
+.+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 96 ~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 174 (302)
T 4e5w_A 96 GGNGIKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTK 174 (302)
T ss_dssp --CCEEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCceEEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccc
Confidence 67899999999999999996543 459999999999999999999999999999999999999999999999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
........ ........||..|+|||++.+..++.++|||||||++|+|++|..|+.
T Consensus 175 ~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 230 (302)
T 4e5w_A 175 AIETDKEY------------------------YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDS 230 (302)
T ss_dssp ECCTTCCE------------------------EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred cccCCCcc------------------------eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCc
Confidence 54321110 012234568889999999999999999999999999999999998763
Q ss_pred C--------------CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 896 G--------------KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 896 ~--------------~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
. ......+..........+....++..+.+||.+||..||.+|||+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 292 (302)
T 4e5w_A 231 SPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQN 292 (302)
T ss_dssp SHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHH
T ss_pred chhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHH
Confidence 2 22223333334444455555668899999999999999999999443
No 204
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.1e-38 Score=347.57 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=212.6
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
..+.+..++|++++.||+|+||.||+|.+. ++..||+|++..... ....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~v~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 79 (279)
T 1qpc_A 6 DEWEVPRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRLYAVVTQ- 79 (279)
T ss_dssp CTTBCCGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred hhcccCHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc----cHHHHHHHHHHHHhCCCcCcceEEEEEcC-
Confidence 455677789999999999999999999974 577899999875432 24678889999999999999999998864
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+..++||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 80 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 159 (279)
T 1qpc_A 80 EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLI 159 (279)
T ss_dssp SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccc
Confidence 56899999999999999997643336999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 160 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~ 213 (279)
T 1qpc_A 160 EDNE--------------------------YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPG 213 (279)
T ss_dssp SSSC--------------------------EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred cCcc--------------------------cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcc
Confidence 3111 011223457889999999998889999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.+.......+... ........++..+.+|+.+||..||.+|||+.+
T Consensus 214 ~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ 259 (279)
T 1qpc_A 214 MTNPEVIQNLERG-YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 259 (279)
T ss_dssp CCHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred cCHHHHHHHHhcc-cCCCCcccccHHHHHHHHHHhccChhhCCCHHH
Confidence 8887777766554 233334567889999999999999999999433
No 205
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=5e-39 Score=367.20 Aligned_cols=277 Identities=16% Similarity=0.159 Sum_probs=207.2
Q ss_pred ccCCcccccccCCCCceeEEEEEEccC-----CeEEEEEEeecccccChhH--------HHHHHHHHHHHHhCCCCCccc
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGS-----GQYFAMKAMDKGVMLNRNK--------VHRACAEREILDMLDHPFVPA 729 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~-----~~~valK~i~~~~~~~~~~--------~~~~~~E~~il~~l~h~nIv~ 729 (998)
..++|++++.||+|+||.||+|.+..+ ++.||+|++.......... ......|+..++.++||||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 356899999999999999999999664 5889999987542111000 112234555667778999999
Q ss_pred eeEEEeeC----CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe--cC
Q 001902 730 LYASFQTK----THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ--GN 803 (998)
Q Consensus 730 l~~~~~~~----~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~--~~ 803 (998)
+++++... .+.||||||+ |++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++ .+
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCT
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCC
Confidence 99998764 5689999999 99999999874 35699999999999999999999999999999999999999 88
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHH
Q 001902 804 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL 883 (998)
Q Consensus 804 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~i 883 (998)
+.+||+|||++.......... ...........||+.|+|||++.+..++.++|||||||+
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~ 250 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHK--------------------AYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYC 250 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCC--------------------CSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred CeEEEEECCcceecccCCccc--------------------ccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHH
Confidence 999999999996643211100 011122345679999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCChHHHHHHHHh----CCC------CCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHH-----
Q 001902 884 LYEMLYGYTPFRGKTRQKTFANILH----KDL------KFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI----- 948 (998)
Q Consensus 884 l~eLltG~~Pf~~~~~~~~~~~i~~----~~~------~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el----- 948 (998)
+|+|++|..||.+......+..... ..+ .+ ....++.++.+|+..||..||.+||++.+++..+
T Consensus 251 l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 251 MIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCF-PAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHS-CTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhc-ccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 9999999999986433222221111 000 01 1134678999999999999999999966543322
Q ss_pred -HcCCCccCCChhhh
Q 001902 949 -KKHPFFKGVNWALV 962 (998)
Q Consensus 949 -L~Hp~f~~~~~~~~ 962 (998)
+..++-..++|...
T Consensus 330 ~~~~~~~~~~dw~~~ 344 (364)
T 3op5_A 330 AIGSKDDGKLDLSVV 344 (364)
T ss_dssp HTTCCCCCCCCC---
T ss_pred HcCCCcCCccceEec
Confidence 24566677788755
No 206
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-38 Score=358.06 Aligned_cols=271 Identities=20% Similarity=0.323 Sum_probs=214.7
Q ss_pred cccccCCcccccccCCCCceeEEEEE----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
..+..++|++++.||+|+||.||+|. +..+++.||+|++... .......+.+|+.++++++||||+++++++.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 94 (327)
T 3lxl_A 18 TIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSDFIVKYRGVSY 94 (327)
T ss_dssp CBCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC---CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred hhhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC---CHHHHHHHHHHHHHHHhcCCCceeEEEEEEe
Confidence 34556899999999999999999999 4678999999998754 3445567889999999999999999999886
Q ss_pred --eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 736 --TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 736 --~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
....+|+||||+++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 173 (327)
T 3lxl_A 95 GPGRQSLRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGL 173 (327)
T ss_dssp CSSSCEEEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGG
T ss_pred cCCCceEEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEccccc
Confidence 5567999999999999999997642 3599999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+......... ........||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 174 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p 229 (327)
T 3lxl_A 174 AKLLPLDKDY------------------------YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDK 229 (327)
T ss_dssp CEECCTTCSE------------------------EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred ceecccCCcc------------------------ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 9654311110 1122344688999999999999899999999999999999999999
Q ss_pred CCCCChH--------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCCh
Q 001902 894 FRGKTRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 894 f~~~~~~--------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~ 959 (998)
|...... .............+....++..+.+||.+||..||.+|||+.++++ .|+..|.....+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~-~L~~~~~~~~~~ 308 (327)
T 3lxl_A 230 SCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP-QLDMLWSGSRGC 308 (327)
T ss_dssp GGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH-HHHHC-------
T ss_pred CccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH-HHHHHHhhhcCc
Confidence 8653321 2233333444455556678899999999999999999999433222 244444444333
No 207
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=3e-38 Score=346.92 Aligned_cols=256 Identities=23% Similarity=0.300 Sum_probs=211.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|++.+.||+|+||.||+|.+.. ++..||+|++.... .......+.+|+.+++.++||||+++++++...
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 85 (281)
T 3cc6_A 8 GIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDC--TLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE 85 (281)
T ss_dssp SCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTS--CHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS
T ss_pred eecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEeccccc--CchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC
Confidence 4566799999999999999999999753 34579999988642 344567888999999999999999999998754
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
..|+||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 86 -~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~ 163 (281)
T 3cc6_A 86 -PTWIIMELYPYGELGHYLERNK-NSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYI 163 (281)
T ss_dssp -SCEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC
T ss_pred -CCEEEEecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccc
Confidence 5689999999999999997642 45899999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus 164 ~~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~ 217 (281)
T 3cc6_A 164 EDED--------------------------YYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW 217 (281)
T ss_dssp -----------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred cccc--------------------------ccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence 3111 011223457889999999998899999999999999999998 9999988
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
.........+.... ..+....++..+.+||.+||..||.+||+ +.+++++
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~~p~~Rps----~~ell~~ 267 (281)
T 3cc6_A 218 LENKDVIGVLEKGD-RLPKPDLCPPVLYTLMTRCWDYDPSDRPR----FTELVCS 267 (281)
T ss_dssp SCGGGHHHHHHHTC-CCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred CChHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHccCCchhCcC----HHHHHHH
Confidence 77776666655543 23344457889999999999999999999 6666654
No 208
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-38 Score=354.06 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=211.1
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCC----eEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSG----QYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~----~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
...+...+|.+.+.||+|+||.||+|.+..++ ..||+|++.... .......+.+|+.+++.++||||+++++++
T Consensus 38 ~~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~ 115 (333)
T 1mqb_A 38 TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGY--TEKQRVDFLGEAGIMGQFSHHNIIRLEGVI 115 (333)
T ss_dssp CCBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCC--CHHHHHHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 34567789999999999999999999986543 469999987542 344556788999999999999999999999
Q ss_pred eeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCc
Q 001902 735 QTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 735 ~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a 814 (998)
...+..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 116 ~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~ 194 (333)
T 1mqb_A 116 SKYKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLS 194 (333)
T ss_dssp CSSSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-
T ss_pred ecCCCcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcc
Confidence 9999999999999999999999764 345999999999999999999999999999999999999999999999999998
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTP 893 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~P 893 (998)
......... ........+|+.|+|||++.+..++.++|||||||++|+|++ |..|
T Consensus 195 ~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 250 (333)
T 1mqb_A 195 RVLEDDPEA------------------------TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250 (333)
T ss_dssp ----------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred hhhcccccc------------------------ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 654321110 011122346889999999999999999999999999999998 9999
Q ss_pred CCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 894 FRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 894 f~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|.+.+.......+..+ ...+....++..+.+||.+||..||.+||++.++
T Consensus 251 f~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 300 (333)
T 1mqb_A 251 YWELSNHEVMKAINDG-FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI 300 (333)
T ss_dssp TTTCCHHHHHHHHHTT-CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred cccCCHHHHHHHHHCC-CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 9998887777766554 3344455678999999999999999999994443
No 209
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=7e-39 Score=359.21 Aligned_cols=256 Identities=22% Similarity=0.244 Sum_probs=206.9
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
..++|++.+.||+|+||.||+|.+ .+++.||+|.+... .......+.+|+.+++.++||||+++++++...+..++
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 112 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPE---SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMIL 112 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSC---CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEE
T ss_pred HHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEeccc---ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEE
Confidence 357899999999999999999997 46899999988754 23446778899999999999999999999999999999
Q ss_pred EEecCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCC
Q 001902 743 ITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCK 820 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~ 820 (998)
||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 192 (321)
T 2qkw_B 113 IYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTEL 192 (321)
T ss_dssp EEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSS
T ss_pred EEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 999999999999997543 235899999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChH
Q 001902 821 PQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQ 900 (998)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~ 900 (998)
.. ........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+....
T Consensus 193 ~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 193 DQ-------------------------THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp SC-------------------------CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred cc-------------------------cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 10 11123456899999999999999999999999999999999999999764432
Q ss_pred HHH-------HHHHhCCCC------C--CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 901 KTF-------ANILHKDLK------F--PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 901 ~~~-------~~i~~~~~~------~--~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
... .......+. . ......+..+.+|+.+||..||.+||| +.++++|
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell~~ 309 (321)
T 2qkw_B 248 EMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPS----MGDVLWK 309 (321)
T ss_dssp SCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred HHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcC----HHHHHHH
Confidence 111 111111111 0 011123457889999999999999999 7777765
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-38 Score=349.39 Aligned_cols=252 Identities=23% Similarity=0.364 Sum_probs=205.2
Q ss_pred hhccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE
Q 001902 655 ILDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF 734 (998)
Q Consensus 655 ~~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~ 734 (998)
....+..+..++|++++.||+|+||.||++.+ +|+.||+|++.... ..+.+.+|+.+++.++||||+++++++
T Consensus 11 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-----~~~~~~~E~~~l~~l~h~~iv~~~~~~ 83 (278)
T 1byg_A 11 FYRSGWALNMKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-----TAQAFLAEASVMTQLRHSNLVQLLGVI 83 (278)
T ss_dssp ----CCBCCGGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC-------HHHHHTHHHHTTCCCTTBCCEEEEE
T ss_pred hhhccccCChhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-----HHHHHHHHHHHHHhCCCCCEeeEEEEE
Confidence 34456677888999999999999999999987 58899999987542 446788999999999999999999987
Q ss_pred ee-CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 735 QT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 735 ~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
.. .+.+|+||||+++++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 163 (278)
T 1byg_A 84 VEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163 (278)
T ss_dssp CCC--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC
T ss_pred EcCCCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccc
Confidence 54 45789999999999999999765333489999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYT 892 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~ 892 (998)
+..... ......+++.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus 164 ~~~~~~------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~ 213 (278)
T 1byg_A 164 TKEASS------------------------------TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRV 213 (278)
T ss_dssp ------------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred cccccc------------------------------cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCC
Confidence 854321 0112357889999999999899999999999999999998 999
Q ss_pred CCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 893 PFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 893 Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
||...........+... ........++..+.+||.+||..||.+||++.++
T Consensus 214 p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 264 (278)
T 1byg_A 214 PYPRIPLKDVVPRVEKG-YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264 (278)
T ss_dssp SCTTSCGGGHHHHHTTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred CCCCCCHHHHHHHHhcC-CCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHH
Confidence 99988777766665544 2333445678999999999999999999994443
No 211
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.8e-38 Score=347.23 Aligned_cols=255 Identities=21% Similarity=0.284 Sum_probs=209.5
Q ss_pred ccccCCccccc-ccCCCCceeEEEEEE--ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIK-PLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~-~LG~G~~g~Vy~a~~--~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|.+.+ .||+|+||.||+|.+ ..+++.||+|++.... ........+.+|+.+++.++||||+++++++ ..
T Consensus 12 ~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~ 89 (291)
T 1xbb_A 12 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGIC-EA 89 (291)
T ss_dssp BCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC------CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ES
T ss_pred eecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CC
Confidence 34567899998 999999999999954 5668999999997653 2344467888999999999999999999998 56
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+..|+||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 90 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 167 (291)
T 1xbb_A 90 ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167 (291)
T ss_dssp SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred CCcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceee
Confidence 7789999999999999999875 45999999999999999999999999999999999999999999999999998654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
...... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 168 ~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 168 RADENY------------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp CTTCSE------------------------EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred ccCCCc------------------------ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 321110 011123346789999999998889999999999999999999 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.+.......+.... ..+....++..+.+||.+||..||.+||++.++
T Consensus 224 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 270 (291)
T 1xbb_A 224 MKGSEVTAMLEKGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 270 (291)
T ss_dssp CCHHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 88877766665543 223334578899999999999999999994443
No 212
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.4e-38 Score=357.19 Aligned_cols=252 Identities=22% Similarity=0.295 Sum_probs=197.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC--
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT-- 738 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~-- 738 (998)
.+..++|++++.||+|+||.||+|.+ .++.||+|++... .........|+.++++++||||+++++++....
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~----~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 93 (322)
T 3soc_A 20 YFQSMPLQLLEVKARGRFGCVWKAQL--LNEYVAVKIFPIQ----DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV 93 (322)
T ss_dssp EETTEEEEEEEEEECSTTCEEEEEEE--TTEEEEEEEECGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS
T ss_pred ccchhhchhhheecccCceEEEEEEE--CCCEEEEEEeecC----chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC
Confidence 45678999999999999999999987 4799999998753 223345566888999999999999999998643
Q ss_pred --eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CceeccCCCCcEEEecCCcE
Q 001902 739 --HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ----------GIIYRDLKPENVLLQGNGHV 806 (998)
Q Consensus 739 --~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~----------~IiHrDLkP~NILi~~~g~v 806 (998)
.+|+||||+++++|.+++... .+++..++.++.||+.||.|||+. ||+||||||+|||++.++.+
T Consensus 94 ~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~ 170 (322)
T 3soc_A 94 DVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170 (322)
T ss_dssp SEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCE
T ss_pred CceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeE
Confidence 479999999999999999774 399999999999999999999999 99999999999999999999
Q ss_pred EEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC-----CCCChhHHHHHH
Q 001902 807 SLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA-----GHTSAVDWWALG 881 (998)
Q Consensus 807 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~-----~~~~~sDIwSlG 881 (998)
||+|||++........ ........||+.|+|||++.+. .++.++||||||
T Consensus 171 kL~DFg~a~~~~~~~~-------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG 225 (322)
T 3soc_A 171 CIADFGLALKFEAGKS-------------------------AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMG 225 (322)
T ss_dssp EECCCTTCEEECTTSC-------------------------CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEccCCcccccccccC-------------------------ccccccCccCccccCHhhcccccccCcCCCccchhHHHH
Confidence 9999999965432111 0112345799999999999874 445688999999
Q ss_pred HHHHHHHcCCCCCCCCCh---------------HHHHHHHHhCCCCCCCCC------CCcHHHHHHHHHccccCccCcCC
Q 001902 882 ILLYEMLYGYTPFRGKTR---------------QKTFANILHKDLKFPSST------PTSLHAKQLMYRLLHRDPKSRLG 940 (998)
Q Consensus 882 ~il~eLltG~~Pf~~~~~---------------~~~~~~i~~~~~~~~~~~------~~s~~l~~Ll~~~L~~dP~~Rpt 940 (998)
|++|+|++|+.||.+... ..............+... ..+..+.+||.+||+.||.+|||
T Consensus 226 ~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 305 (322)
T 3soc_A 226 LVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLS 305 (322)
T ss_dssp HHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcC
Confidence 999999999999975421 122222222221222111 12345899999999999999999
Q ss_pred ChhcHH
Q 001902 941 SHEGAN 946 (998)
Q Consensus 941 ~~~~a~ 946 (998)
+.++++
T Consensus 306 ~~ell~ 311 (322)
T 3soc_A 306 AGCVGE 311 (322)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444333
No 213
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.6e-38 Score=347.31 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=209.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------- 736 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------- 736 (998)
..+|++++.||+|+||.||+|.+..+++.||+|++.... ..+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-------HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 357999999999999999999999899999999997542 245679999999999999999998864
Q ss_pred ---------CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEE
Q 001902 737 ---------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 737 ---------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vk 807 (998)
...+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+|+||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEE
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEE
Confidence 45689999999999999999865556799999999999999999999999999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eL 887 (998)
|+|||++...... .......||+.|+|||++.+..++.++|||||||++|+|
T Consensus 163 l~Dfg~~~~~~~~----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l 214 (284)
T 2a19_B 163 IGDFGLVTSLKND----------------------------GKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214 (284)
T ss_dssp ECCCTTCEESSCC----------------------------SCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHH
T ss_pred ECcchhheecccc----------------------------ccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHH
Confidence 9999998553311 112234699999999999999999999999999999999
Q ss_pred HcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 888 LYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 888 ltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
++|..||... ......+....+ ....+..+.+||.+||..||.+||| +.++++|.+.-.
T Consensus 215 ~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~Rps----~~e~l~~l~~~~ 273 (284)
T 2a19_B 215 LHVCDTAFET--SKFFTDLRDGII----SDIFDKKEKTLLQKLLSKKPEDRPN----TSEILRTLTVWK 273 (284)
T ss_dssp HSCCSSHHHH--HHHHHHHHTTCC----CTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHHHHHHT
T ss_pred HhcCCcchhH--HHHHHHhhcccc----cccCCHHHHHHHHHHccCChhhCcC----HHHHHHHHHHHh
Confidence 9999988542 223333333322 2346788999999999999999999 899998876543
No 214
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=6.3e-38 Score=349.93 Aligned_cols=260 Identities=22% Similarity=0.302 Sum_probs=207.7
Q ss_pred ccccCCcccccccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|.+.+.||+|+||.||+|.+.. ++..||+|++.... ........+.+|+.++++++||||+++++++...
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDN-SSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---C-CCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccc-cchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3556789999999999999999998865 56789999987643 2344567788999999999999999999998765
Q ss_pred C-----eEEEEEecCCCCchhHHHhh----CCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEE
Q 001902 738 T-----HVCLITDYCPGGELFLLLDR----QPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSL 808 (998)
Q Consensus 738 ~-----~~~lV~E~~~ggsL~~~l~~----~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL 808 (998)
+ ..++||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEE
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEE
Confidence 4 45999999999999999853 22356999999999999999999999999999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLl 888 (998)
+|||++........ ........+++.|+|||.+.+..++.++|||||||++|+|+
T Consensus 189 ~Dfg~~~~~~~~~~-------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~ 243 (313)
T 3brb_A 189 ADFGLSKKIYSGDY-------------------------YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIA 243 (313)
T ss_dssp CSCSCC-----------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHH
T ss_pred eecCcceecccccc-------------------------cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHH
Confidence 99999865421110 01122345788999999999999999999999999999999
Q ss_pred c-CCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 889 Y-GYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 889 t-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+ |..||.+.........+.... ..+....++..+.+||.+||..||.+||+ +.++++|
T Consensus 244 ~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~l~~~ 302 (313)
T 3brb_A 244 TRGMTPYPGVQNHEMYDYLLHGH-RLKQPEDCLDELYEIMYSCWRTDPLDRPT----FSVLRLQ 302 (313)
T ss_dssp TTSCCSSTTCCGGGHHHHHHTTC-CCCCBTTCCHHHHHHHHHTTCSSGGGSCC----HHHHHHH
T ss_pred hcCCCCCccCCHHHHHHHHHcCC-CCCCCccccHHHHHHHHHHcCCChhhCcC----HHHHHHH
Confidence 9 999999988877777766653 23334457889999999999999999999 6666654
No 215
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.4e-38 Score=346.30 Aligned_cols=272 Identities=18% Similarity=0.221 Sum_probs=210.3
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE-eeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~~~l 742 (998)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+..|+.+++.++|++++..+..+ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC--------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc-----chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEE
Confidence 4689999999999999999999999999999998765422 23467799999999887766665554 67888999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~~ 819 (998)
||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEcc-CCCHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 99999 999999997542 459999999999999999999999999999999999999 7889999999999966432
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTR 899 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~ 899 (998)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 4hgt_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccC--------------------ccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccch
Confidence 2110 00111233456899999999999999999999999999999999999999987432
Q ss_pred ---HHHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHHHH------HcCCCccCCChhhh
Q 001902 900 ---QKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEI------KKHPFFKGVNWALV 962 (998)
Q Consensus 900 ---~~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~el------L~Hp~f~~~~~~~~ 962 (998)
...+..+.......+ ....++..+.+||.+||+.||.+|||+.++++.+ ...+|-..++|..+
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~~~~~~~~dw~~~ 295 (296)
T 4hgt_A 221 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQGFSYDYVFDWNML 295 (296)
T ss_dssp SSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHTCCTTCCCGGGGC
T ss_pred hhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhCCCccCccchhhc
Confidence 223333333222222 1134678999999999999999999955443322 23566666777665
No 216
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-37 Score=344.62 Aligned_cols=252 Identities=21% Similarity=0.246 Sum_probs=205.9
Q ss_pred CcccccccCCCCceeEEEEEEccCCe---EEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE-E
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQ---YFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV-C 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~---~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~-~ 741 (998)
.|.+.+.||+|+||.||+|.+..++. .||+|.+... ........+.+|+.+++.++||||+++++++...+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 99 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI--TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH 99 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc--ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcE
Confidence 46777999999999999999765544 8999998753 3445667888999999999999999999999766554 9
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+.+++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 100 ~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 100 VLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp EEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999999999764 3568999999999999999999999999999999999999999999999999996543111
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
. ..........+|+.|+|||.+.+..++.++|||||||++|+|++ |.+||...+..
T Consensus 179 ~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~ 235 (298)
T 3pls_A 179 Y-----------------------YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPF 235 (298)
T ss_dssp G-----------------------GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGG
T ss_pred c-----------------------cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHH
Confidence 0 01122334568999999999999999999999999999999999 55556665555
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.....+... ...+.....+..+.+||.+||..||.+|||+.++
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l 278 (298)
T 3pls_A 236 DLTHFLAQG-RRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVL 278 (298)
T ss_dssp GHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHhhcC-CCCCCCccchHHHHHHHHHHccCChhhCcCHHHH
Confidence 555544443 3444555678899999999999999999994443
No 217
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.4e-38 Score=368.35 Aligned_cols=276 Identities=18% Similarity=0.233 Sum_probs=220.1
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCccceeEEEeeCCeEE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFVPALYASFQTKTHVC 741 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~nIv~l~~~~~~~~~~~ 741 (998)
..++|++++.||+|+||.||+|.+..+++.||||++..... ...+..|+.+++.+.| ++|+.+..++...+..|
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~-----~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~ 79 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK-----HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNV 79 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS-----SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEE
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc-----cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEE
Confidence 35789999999999999999999999999999998875432 1346789999999976 56666777777888999
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE---ecCCcEEEEeccCccccC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL---QGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi---~~~g~vkL~DFG~a~~~~ 818 (998)
|||||+ +++|.+++.... ..+++..++.|+.||+.||.|||++|||||||||+|||| +.++.+||+|||+++...
T Consensus 80 lvme~~-g~sL~~ll~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCS-RKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EEEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EEEECC-CCCHHHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999999 999999997542 459999999999999999999999999999999999999 588999999999997643
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT 898 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~ 898 (998)
..... ...+........||+.|+|||++.+..++.++|||||||+||+|++|+.||.+..
T Consensus 158 ~~~~~--------------------~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 158 DTSTH--------------------QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp CTTTC--------------------CBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CCccc--------------------cccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 22110 0111223346789999999999999999999999999999999999999998754
Q ss_pred h---HHHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhcHH---HH---HcCCCccCCChhhhhcC
Q 001902 899 R---QKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN---EI---KKHPFFKGVNWALVRCM 965 (998)
Q Consensus 899 ~---~~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~---el---L~Hp~f~~~~~~~~~~~ 965 (998)
. ...+..+........ ....++.++.+||.+||..||.+||++.++++ ++ ..|+|+..++|..+...
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~~~~~~~~~dW~~~~~~ 296 (483)
T 3sv0_A 218 AGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIREGFQFDYVFDWTILKYQ 296 (483)
T ss_dssp CSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTTCCCSSCCHHHHHTC-
T ss_pred chhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHcCCCccCCcCchhhccc
Confidence 3 333444433221111 11346789999999999999999999765432 22 46899999999987443
No 218
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.6e-38 Score=368.97 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=209.4
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++.+.||+|+||.||+|.+.. +..||+|+++.... ..+.+.+|+.+|++++||||+++++++.. +
T Consensus 178 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~ 251 (452)
T 1fmk_A 178 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 251 (452)
T ss_dssp CSBCCGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ccccChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-C
Confidence 345667889999999999999999999864 56799999986432 23578899999999999999999999876 6
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+||||||+++++|.+++.......++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus 252 ~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 331 (452)
T 1fmk_A 252 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 331 (452)
T ss_dssp SCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC---
T ss_pred ceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecC
Confidence 78999999999999999976444569999999999999999999999999999999999999999999999999996542
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........++..|+|||++.+..++.++|||||||++|+|++ |..||.+.
T Consensus 332 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~ 385 (452)
T 1fmk_A 332 DNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 385 (452)
T ss_dssp -------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred CCc--------------------------eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCC
Confidence 110 011123357889999999999999999999999999999999 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
...+....+..+ ...+....++..+.+||.+||..||.+|||+.+
T Consensus 386 ~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~ 430 (452)
T 1fmk_A 386 VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430 (452)
T ss_dssp CHHHHHHHHHTT-CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHH
Confidence 888877776654 333444567889999999999999999999433
No 219
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=355.83 Aligned_cols=265 Identities=25% Similarity=0.376 Sum_probs=208.7
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe----eC
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ----TK 737 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~----~~ 737 (998)
+..++|++++.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++.++||||+++++++. ..
T Consensus 26 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (317)
T 2buj_A 26 IDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH---EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAK 102 (317)
T ss_dssp ETTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTE
T ss_pred ECCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC---CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCC
Confidence 4567899999999999999999999999999999998653 4455677889999999999999999999986 34
Q ss_pred CeEEEEEecCCCCchhHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 738 THVCLITDYCPGGELFLLLDRQ--PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
...|+||||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 103 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~ 182 (317)
T 2buj_A 103 HEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMN 182 (317)
T ss_dssp EEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCE
T ss_pred ceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcch
Confidence 5889999999999999998752 34569999999999999999999999999999999999999999999999999885
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC---CCChhHHHHHHHHHHHHHcCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG---HTSAVDWWALGILLYEMLYGYT 892 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~---~~~~sDIwSlG~il~eLltG~~ 892 (998)
........ .. ............||+.|+|||++.+.. ++.++|||||||++|+|++|..
T Consensus 183 ~~~~~~~~----~~--------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 244 (317)
T 2buj_A 183 QACIHVEG----SR--------------QALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244 (317)
T ss_dssp ESCEEEES----HH--------------HHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred hccccccc----cc--------------ccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence 43210000 00 000001112346899999999987654 6889999999999999999999
Q ss_pred CCCCCCh-HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 893 PFRGKTR-QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 893 Pf~~~~~-~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
||..... .............++.....+..+.+||.+||..||.+||+ +.++++|
T Consensus 245 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~~ll~~ 300 (317)
T 2buj_A 245 PYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPH----IPLLLSQ 300 (317)
T ss_dssp TTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCC----HHHHHHH
T ss_pred ChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCC----HHHHHHH
Confidence 9954211 01122233344555666678899999999999999999999 7777765
No 220
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=5.9e-39 Score=360.38 Aligned_cols=259 Identities=23% Similarity=0.269 Sum_probs=204.2
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHV 740 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~ 740 (998)
.+..++|++.+.||+|+||.||+|.+ .+|+.||+|++....... ....+.+|+.+++.++||||+++++++...+..
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 102 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQG--GELQFQTEVEMISMAVHRNLLRLRGFCMTPTER 102 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-------CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCC
T ss_pred HHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCch--HHHHHHHHHHHHHhccCCCccceEEEEecCCce
Confidence 34567899999999999999999986 468999999987643221 123578899999999999999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 741 CLITDYCPGGELFLLLDRQP--TKVLKEDAVRFYAAEVVVALEYLHCQ---GIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~---~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
++||||+++++|.+++.... ...+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+|||++.
T Consensus 103 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~ 182 (326)
T 3uim_A 103 LLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAK 182 (326)
T ss_dssp EEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCE
T ss_pred EEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCcccc
Confidence 99999999999999998643 23499999999999999999999999 99999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
...... ........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 236 (326)
T 3uim_A 183 LMDYKD--------------------------THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFD 236 (326)
T ss_dssp ECCSSS--------------------------SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred ccCccc--------------------------ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccc
Confidence 543111 111234569999999999988889999999999999999999999995
Q ss_pred C----CChHHHHHHHHhCCCC---C----------CCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCC
Q 001902 896 G----KTRQKTFANILHKDLK---F----------PSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHP 952 (998)
Q Consensus 896 ~----~~~~~~~~~i~~~~~~---~----------~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp 952 (998)
. ................ . ......+..+.+|+.+||+.||.+||| +.++++|-
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~ell~~L 306 (326)
T 3uim_A 237 LARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPK----MSEVVRML 306 (326)
T ss_dssp HHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCC----HHHHHHHH
T ss_pred ccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCC----HHHHHHHh
Confidence 2 1111111122221110 0 001112357899999999999999999 66666653
No 221
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=344.90 Aligned_cols=245 Identities=24% Similarity=0.422 Sum_probs=197.9
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~ 741 (998)
+..++|++.+.||+|+||.||++.+ .++.||+|.+... .....+.+|+.++++++||||+++++++.+ ..|
T Consensus 5 i~~~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~ 75 (307)
T 2eva_A 5 IDYKEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE-----SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVC 75 (307)
T ss_dssp CCGGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST-----THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTE
T ss_pred CCHhHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh-----hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcE
Confidence 5567899999999999999999997 4789999998643 345678899999999999999999998764 478
Q ss_pred EEEecCCCCchhHHHhhCCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCCCcEEEecCCc-EEEEeccCccc
Q 001902 742 LITDYCPGGELFLLLDRQPT-KVLKEDAVRFYAAEVVVALEYLHC---QGIIYRDLKPENVLLQGNGH-VSLTDFDLSCL 816 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~LH~---~~IiHrDLkP~NILi~~~g~-vkL~DFG~a~~ 816 (998)
+||||+++++|.+++..... ..++...+..++.||+.||.|||+ +||+||||||+|||++.++. +||+|||++..
T Consensus 76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~ 155 (307)
T 2eva_A 76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACD 155 (307)
T ss_dssp EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---
T ss_pred EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccc
Confidence 99999999999999976432 247889999999999999999999 89999999999999998886 79999999854
Q ss_pred cCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCC
Q 001902 817 TSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRG 896 (998)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~ 896 (998)
... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus 156 ~~~------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~ 205 (307)
T 2eva_A 156 IQT------------------------------HMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDE 205 (307)
T ss_dssp ---------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTT
T ss_pred ccc------------------------------ccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchh
Confidence 320 01223589999999999999999999999999999999999999986
Q ss_pred CCh--HHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 897 KTR--QKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 897 ~~~--~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
... ......+... ...+....++..+.+||.+||..||.+||| +.++++
T Consensus 206 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~~l~~dp~~Rps----~~ell~ 256 (307)
T 2eva_A 206 IGGPAFRIMWAVHNG-TRPPLIKNLPKPIESLMTRCWSKDPSQRPS----MEEIVK 256 (307)
T ss_dssp TCSSHHHHHHHHHTT-CCCCCBTTCCHHHHHHHHHHTCSSGGGSCC----HHHHHH
T ss_pred hCccHHHHHHHHhcC-CCCCcccccCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 433 2223233332 233334557889999999999999999999 555544
No 222
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.9e-38 Score=358.06 Aligned_cols=252 Identities=17% Similarity=0.207 Sum_probs=202.1
Q ss_pred cCCcccccccCCCCceeEEEEEEcc--------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccc------
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPA------ 729 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~--------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~------ 729 (998)
.++|++.+.||+|+||.||+|.+.. .++.||+|++... ..+.+|+.++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~--------~~~~~E~~~l~~l~h~niv~~~~~~~ 112 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD--------GRLFNEQNFFQRAAKPLQVNKWKKLY 112 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT--------STHHHHHHHHHHHCCHHHHHHHHHHT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc--------chHHHHHHHHHHhcccchhhhhhhhc
Confidence 4789999999999999999999987 4889999998754 35778999999999999887
Q ss_pred ---------eeEEEee-CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 001902 730 ---------LYASFQT-KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 799 (998)
Q Consensus 730 ---------l~~~~~~-~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NIL 799 (998)
+++++.. ....|+||||+ +++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 113 ~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl 191 (352)
T 2jii_A 113 STPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIF 191 (352)
T ss_dssp TCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEE
T ss_pred cCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEE
Confidence 6777765 78899999999 999999998764467999999999999999999999999999999999999
Q ss_pred EecCC--cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHH
Q 001902 800 LQGNG--HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDW 877 (998)
Q Consensus 800 i~~~g--~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDI 877 (998)
++.++ .+||+|||++.......... ...........||+.|+|||++.+..++.++||
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di 251 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHV--------------------AYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDL 251 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCC--------------------CCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCccc--------------------cccccccccccCCccccCHHHHccCCCCchhhH
Confidence 99998 99999999996643211100 001112244579999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCC-hHHHHHHH----HhCCCCCCCC----CCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 878 WALGILLYEMLYGYTPFRGKT-RQKTFANI----LHKDLKFPSS----TPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 878 wSlG~il~eLltG~~Pf~~~~-~~~~~~~i----~~~~~~~~~~----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|||||++|+|++|..||.+.. ....+... ......++.. ..++..+.+||.+||..||.+||++.++
T Consensus 252 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 327 (352)
T 2jii_A 252 QSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAML 327 (352)
T ss_dssp HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHH
Confidence 999999999999999998764 22222222 2222222221 2468899999999999999999995544
No 223
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=369.23 Aligned_cols=262 Identities=22% Similarity=0.325 Sum_probs=200.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeE
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHV 740 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~ 740 (998)
+...+|.+.+.||+|+||+||. ....+++.||||++..... ....+|+.+++.+ +||||+++++++...+..
T Consensus 21 i~~~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~------~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~ 93 (432)
T 3p23_A 21 VGKISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF------SFADREVQLLRESDEHPNVIRYFCTEKDRQFQ 93 (432)
T ss_dssp ETTEEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE------EECHHHHHHHHHSCCCTTBCCEEEEEEETTEE
T ss_pred EccEEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH------HHHHHHHHHHHhccCCCCcCeEEEEEecCCEE
Confidence 3345699999999999999764 3346799999999875432 2245799999999 899999999999999999
Q ss_pred EEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---C--CcEEEEeccCcc
Q 001902 741 CLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---N--GHVSLTDFDLSC 815 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~--g~vkL~DFG~a~ 815 (998)
||||||| +++|.+++.... ..++...+..++.||+.||.|||++||+||||||+|||++. + ..+||+|||++.
T Consensus 94 ~lv~E~~-~g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~ 171 (432)
T 3p23_A 94 YIAIELC-AATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCK 171 (432)
T ss_dssp EEEEECC-SEEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEE
T ss_pred EEEEECC-CCCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEeccccee
Confidence 9999999 569999997653 33555567789999999999999999999999999999953 2 358899999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhc---CCCCCChhHHHHHHHHHHHHHc-CC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIA---GAGHTSAVDWWALGILLYEMLY-GY 891 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~---~~~~~~~sDIwSlG~il~eLlt-G~ 891 (998)
....... ........+||+.|+|||++. ...++.++|||||||++|+|++ |.
T Consensus 172 ~~~~~~~------------------------~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~ 227 (432)
T 3p23_A 172 KLAVGRH------------------------SFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGS 227 (432)
T ss_dssp CC------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSC
T ss_pred eccCCCc------------------------ceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCC
Confidence 5431110 011223467999999999997 4567789999999999999999 99
Q ss_pred CCCCCCChHHHHHHHHhCCCCCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCCChh
Q 001902 892 TPFRGKTRQKTFANILHKDLKFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGVNWA 960 (998)
Q Consensus 892 ~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~~~~ 960 (998)
.||...........+........ .....+..+.+||.+||+.||.+||| +.++++||||..++|.
T Consensus 228 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~evl~hp~f~~~~~~ 293 (432)
T 3p23_A 228 HPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPS----AKHVLKHPFFWSLEKQ 293 (432)
T ss_dssp BTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCC----HHHHHTSTTTCCHHHH
T ss_pred CCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCC----HHHHHhCccccChHHH
Confidence 99976544333222111111111 11223556889999999999999999 9999999999988774
No 224
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.5e-37 Score=363.39 Aligned_cols=257 Identities=25% Similarity=0.341 Sum_probs=197.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
.+.|.+.+.||+|+||+||.+. ..+|+.||||++.... ...+.+|+.+++.+ +||||+++++++...+.+||
T Consensus 14 ~~~~~~~~~LG~G~~g~V~~~~-~~~g~~vAvK~~~~~~------~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~l 86 (434)
T 2rio_A 14 KNLVVSEKILGYGSSGTVVFQG-SFQGRPVAVKRMLIDF------CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYI 86 (434)
T ss_dssp SSCEEEEEEEEECSTTCEEEEE-ESSSSEEEEEEEEGGG------HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred hheeeccCeEeeCCCeEEEEEE-EECCeEEEEEEEcHHH------HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEE
Confidence 3556777899999999998764 4679999999987542 34567899999876 89999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecC-------------C
Q 001902 743 ITDYCPGGELFLLLDRQPTKV-----LKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGN-------------G 804 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~-----l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~-------------g 804 (998)
||||| +++|.+++....... .++..+..++.||+.||.|||++||+||||||+|||++.+ +
T Consensus 87 v~E~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~ 165 (434)
T 2rio_A 87 ALELC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENL 165 (434)
T ss_dssp EECCC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSC
T ss_pred EEecC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCce
Confidence 99999 569999998643211 1233456799999999999999999999999999999754 4
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-------CCCCChhHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVDW 877 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sDI 877 (998)
.+||+|||++.......... .......+||+.|+|||++.+ ..++.++||
T Consensus 166 ~~kL~DFG~a~~~~~~~~~~-----------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Di 222 (434)
T 2rio_A 166 RILISDFGLCKKLDSGQSSF-----------------------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDI 222 (434)
T ss_dssp EEEECCCTTCEECCC-------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHH
T ss_pred EEEEcccccceecCCCCccc-----------------------eeeecCCCCCCCccCHHHhccccccccccCcchhhhh
Confidence 89999999996643211100 011234579999999999976 568899999
Q ss_pred HHHHHHHHHHHc-CCCCCCCCChHHHHHHHHhCCCCCCCCC-----CCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 878 WALGILLYEMLY-GYTPFRGKTRQKTFANILHKDLKFPSST-----PTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 878 wSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-----~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|||||++|+|++ |..||....... ..+.......+... .++.++.+||.+||+.||.+||| +.++++|
T Consensus 223 wSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps----~~eil~h 296 (434)
T 2rio_A 223 FSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPT----AMKVLRH 296 (434)
T ss_dssp HHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCC----HHHHHTS
T ss_pred HhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCC----HHHHHhC
Confidence 999999999998 999997765433 34455444433321 23578999999999999999999 9999999
Q ss_pred CCccCC
Q 001902 952 PFFKGV 957 (998)
Q Consensus 952 p~f~~~ 957 (998)
|||...
T Consensus 297 p~f~~~ 302 (434)
T 2rio_A 297 PLFWPK 302 (434)
T ss_dssp GGGSCH
T ss_pred CccCCc
Confidence 999753
No 225
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.2e-37 Score=345.12 Aligned_cols=251 Identities=27% Similarity=0.380 Sum_probs=197.1
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCccceeEEEee---
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQT--- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~--- 736 (998)
+..++|++++.||+|+||.||+|.+ +++.||+|++... ....+..|.+++.. ++||||+++++++..
T Consensus 5 ~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~ 76 (301)
T 3q4u_A 5 TVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR------DEKSWFRETELYNTVMLRHENILGFIASDMTSRH 76 (301)
T ss_dssp CCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEET
T ss_pred cccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc------cchhhHHHHHHHHHhhccCcCeeeEEEeeccccC
Confidence 3457899999999999999999997 7899999998653 23455667777777 799999999998654
Q ss_pred -CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEEecCCcEE
Q 001902 737 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVS 807 (998)
Q Consensus 737 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~~IiHrDLkP~NILi~~~g~vk 807 (998)
...+|+||||+++++|.+++.. ..+++..+..++.||+.||.||| ++||+||||||+|||++.++.+|
T Consensus 77 ~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 77 SSTQLWLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp TEEEEEEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEE
T ss_pred CCceeEEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEE
Confidence 3568999999999999999965 35999999999999999999999 99999999999999999999999
Q ss_pred EEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC------CCCChhHHHHHH
Q 001902 808 LTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALG 881 (998)
Q Consensus 808 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~sDIwSlG 881 (998)
|+|||++......... .........||+.|+|||++.+. .++.++||||||
T Consensus 154 l~Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG 210 (301)
T 3q4u_A 154 IADLGLAVMHSQSTNQ-----------------------LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210 (301)
T ss_dssp ECCCTTCEEEETTTTE-----------------------EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred EeeCCCeeeccccccc-----------------------ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence 9999998654311110 00112345799999999999876 445699999999
Q ss_pred HHHHHHHcC----------CCCCCCCC----hHHHHHHHHhCCCCCCCC------CCCcHHHHHHHHHccccCccCcCCC
Q 001902 882 ILLYEMLYG----------YTPFRGKT----RQKTFANILHKDLKFPSS------TPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 882 ~il~eLltG----------~~Pf~~~~----~~~~~~~i~~~~~~~~~~------~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
|++|+|++| ..||.... ....+..........+.. ...+..+.+||.+||..||.+|||
T Consensus 211 ~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps- 289 (301)
T 3q4u_A 211 LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLT- 289 (301)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCC-
T ss_pred HHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCC-
Confidence 999999999 88986532 223334433322222221 123467899999999999999999
Q ss_pred hhcHHHHHc
Q 001902 942 HEGANEIKK 950 (998)
Q Consensus 942 ~~~a~elL~ 950 (998)
+.++++
T Consensus 290 ---~~~i~~ 295 (301)
T 3q4u_A 290 ---ALRIKK 295 (301)
T ss_dssp ---HHHHHH
T ss_pred ---HHHHHH
Confidence 555543
No 226
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.3e-37 Score=342.73 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=206.7
Q ss_pred cCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE-eeCCe
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTH 739 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~ 739 (998)
...|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.++++++||||+++++++ ..++.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 101 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGS 101 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC--CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSC
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC--CCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCc
Confidence 35799999999999999999997543 346899988753 3455667888999999999999999999985 45678
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
.|+||||+++++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus 102 ~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 102 PLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp CEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred eEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccc
Confidence 89999999999999999764 35589999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
... ..........||+.|+|||.+.+..++.++|||||||++|+|++ |.+||.+.+
T Consensus 181 ~~~-----------------------~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~ 237 (298)
T 3f66_A 181 KEY-----------------------YSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN 237 (298)
T ss_dssp GGG-----------------------CBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred cch-----------------------hccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCC
Confidence 110 01112234568899999999999999999999999999999999 777887777
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.......+...... ......+..+.+|+.+||..||.+||++.++
T Consensus 238 ~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~~l~~~p~~Rps~~el 282 (298)
T 3f66_A 238 TFDITVYLLQGRRL-LQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 282 (298)
T ss_dssp TTTHHHHHHTTCCC-CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHHhcCCCC-CCCccCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 76666666655432 2334568899999999999999999994443
No 227
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=356.38 Aligned_cols=259 Identities=17% Similarity=0.138 Sum_probs=197.0
Q ss_pred cccCCcccccccCCCCceeEEEEEEcc---CCeEEEEEEeecccccChh--------HHHHHHHHHHHHHhCCCCCccce
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCG---SGQYFAMKAMDKGVMLNRN--------KVHRACAEREILDMLDHPFVPAL 730 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~---~~~~valK~i~~~~~~~~~--------~~~~~~~E~~il~~l~h~nIv~l 730 (998)
+..++|++.+.||+|+||.||+|.+.. ++..+|+|++......... ....+..|+.+++.++||||+++
T Consensus 34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 345789999999999999999999987 7889999998764221111 11235578888999999999999
Q ss_pred eEEEee----CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC--
Q 001902 731 YASFQT----KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG-- 804 (998)
Q Consensus 731 ~~~~~~----~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g-- 804 (998)
++++.. ....|+||||+ +++|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 114 YGSGLTEFKGRSYRFMVMERL-GIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEEEEESSSCEEEEEEEECE-EEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTT
T ss_pred ecccccccCCCcEEEEEEecc-CCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCC
Confidence 999987 78999999999 999999997653 699999999999999999999999999999999999999887
Q ss_pred cEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHH
Q 001902 805 HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILL 884 (998)
Q Consensus 805 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il 884 (998)
.+||+|||++.......... ...........||+.|+|||++.+..++.++|||||||++
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il 250 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHK--------------------QYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM 250 (345)
T ss_dssp SEEECCCTTCEESSGGGCCC--------------------CCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred cEEEEeCCCceecccccccc--------------------cchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence 99999999996643111100 0011122456799999999999999999999999999999
Q ss_pred HHHHcCCCCCCCC--ChHHHHHHHHhCCCCCC-------CCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 885 YEMLYGYTPFRGK--TRQKTFANILHKDLKFP-------SSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 885 ~eLltG~~Pf~~~--~~~~~~~~i~~~~~~~~-------~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
|+|++|..||.+. +...............+ .....+..+.+||.+||..||.+||++.+
T Consensus 251 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ 318 (345)
T 2v62_A 251 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQA 318 (345)
T ss_dssp HHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHH
T ss_pred HHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHH
Confidence 9999999999653 22222111111111111 11257889999999999999999999444
No 228
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.3e-38 Score=346.91 Aligned_cols=233 Identities=25% Similarity=0.452 Sum_probs=192.4
Q ss_pred cCCcccc-cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHH-HhCCCCCccceeEEEee----C
Q 001902 664 LQHFRPI-KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREIL-DMLDHPFVPALYASFQT----K 737 (998)
Q Consensus 664 ~~~y~~~-~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il-~~l~h~nIv~l~~~~~~----~ 737 (998)
.++|.++ +.||+|+||.||+|.+..+++.||+|++... ....+|+.++ +.++||||+++++++.. .
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~ 87 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC--------PKARREVELHWRASQCPHIVRIVDVYENLYAGR 87 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS--------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc--------HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCC
Confidence 4678888 7799999999999999999999999998743 3566788887 66699999999999987 7
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec---CCcEEEEeccCc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG---NGHVSLTDFDLS 814 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~---~g~vkL~DFG~a 814 (998)
..+|+||||+++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a 167 (299)
T 3m2w_A 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFA 167 (299)
T ss_dssp EEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTC
T ss_pred ceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccc
Confidence 78999999999999999998876567999999999999999999999999999999999999998 789999999988
Q ss_pred cccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCC
Q 001902 815 CLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPF 894 (998)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf 894 (998)
.... +..++.++|||||||++|+|++|..||
T Consensus 168 ~~~~-------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~pf 198 (299)
T 3m2w_A 168 KETT-------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYPPF 198 (299)
T ss_dssp EECT-------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSC
T ss_pred cccc-------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCCCC
Confidence 4321 234677899999999999999999999
Q ss_pred CCCChHHHHHHHHh----CCCCCCC--CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccCC
Q 001902 895 RGKTRQKTFANILH----KDLKFPS--STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKGV 957 (998)
Q Consensus 895 ~~~~~~~~~~~i~~----~~~~~~~--~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~~ 957 (998)
.+.+.......+.. ....++. ...++.++.+||.+||..||.+||| +.++++||||+..
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps----~~e~l~hp~~~~~ 263 (299)
T 3m2w_A 199 YSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT----ITEFMNHPWIMQS 263 (299)
T ss_dssp CC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCC----HHHHHTSHHHHTG
T ss_pred CCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCC----HHHHhcChhhccc
Confidence 87654332211111 1111111 1356889999999999999999999 9999999999874
No 229
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.2e-37 Score=348.84 Aligned_cols=255 Identities=23% Similarity=0.328 Sum_probs=207.3
Q ss_pred cccCCcccccccCCCCceeEEEEEE----ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee-
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVEL----CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT- 736 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~----~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~- 736 (998)
+....|++++.||+|+||.||++.. ..+++.||+|++... ........+.+|+.+++.++||||+++++++..
T Consensus 28 ~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD--AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT--CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred ecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc--cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC
Confidence 3333349999999999999988764 457899999999864 234556778999999999999999999999987
Q ss_pred -CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 737 -KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 737 -~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
...+++||||+++++|.+++... .+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~ 182 (318)
T 3lxp_A 106 GAASLQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAK 182 (318)
T ss_dssp TTTEEEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCE
T ss_pred CCceEEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccc
Confidence 46899999999999999999774 38999999999999999999999999999999999999999999999999996
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
....... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus 183 ~~~~~~~------------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~ 238 (318)
T 3lxp_A 183 AVPEGHE------------------------YYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQ 238 (318)
T ss_dssp ECCTTCS------------------------EEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred ccccccc------------------------ccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCccc
Confidence 5432110 0012234468889999999999889999999999999999999999997
Q ss_pred CCChH--------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHH
Q 001902 896 GKTRQ--------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK 949 (998)
Q Consensus 896 ~~~~~--------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL 949 (998)
..... ......+......+....++..+.+||.+||..||.+||| +.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps----~~ell 302 (318)
T 3lxp_A 239 SPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT----FENLI 302 (318)
T ss_dssp SHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC----HHHHH
T ss_pred ccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcC----HHHHH
Confidence 53221 1222333444455556678899999999999999999999 55555
No 230
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=351.69 Aligned_cols=264 Identities=25% Similarity=0.359 Sum_probs=191.8
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEe----
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQ---- 735 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~---- 735 (998)
.+...+|++.+.||+|+||.||+|.+..+++.||+|++... .......+.+|+.+++++. ||||+++++++.
T Consensus 24 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 24 ELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN---EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES---SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC---chHHHHHHHHHHHHHHHhccCCChhhcccccccccc
Confidence 45556899999999999999999999999999999998643 3445667889999999995 999999999983
Q ss_pred ----eCCeEEEEEecCCCCchhHHHhh-CCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ceeccCCCCcEEEecCCcEEE
Q 001902 736 ----TKTHVCLITDYCPGGELFLLLDR-QPTKVLKEDAVRFYAAEVVVALEYLHCQG--IIYRDLKPENVLLQGNGHVSL 808 (998)
Q Consensus 736 ----~~~~~~lV~E~~~ggsL~~~l~~-~~~~~l~~~~~~~i~~qil~aL~~LH~~~--IiHrDLkP~NILi~~~g~vkL 808 (998)
....+++||||+ +|+|.+++.. .....+++..++.++.||+.||.|||++| |+||||||+|||++.++.+||
T Consensus 101 ~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 101 ESDTGQAEFLLLTELC-KGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp TSTTSSEEEEEEEECC-SEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ccccCCceEEEEEEec-CCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEE
Confidence 445689999999 5799888865 22356999999999999999999999999 999999999999999999999
Q ss_pred EeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh---cCCCCCChhHHHHHHHHHH
Q 001902 809 TDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII---AGAGHTSAVDWWALGILLY 885 (998)
Q Consensus 809 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l---~~~~~~~~sDIwSlG~il~ 885 (998)
+|||++............. .............||+.|+|||++ .+..++.++|||||||++|
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~ 244 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSA---------------QRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244 (337)
T ss_dssp CCCTTCBCCSSCC----------------------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred ecCccceeccccCcccccc---------------cccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence 9999997654222110000 000001122345799999999998 5667888999999999999
Q ss_pred HHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 886 EMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 886 eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
+|++|..||....... +.......+.....+..+.+||.+||+.||.+||+ +.++++|
T Consensus 245 el~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps----~~e~l~~ 302 (337)
T 3ll6_A 245 LLCFRQHPFEDGAKLR----IVNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLS----IAEVVHQ 302 (337)
T ss_dssp HHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCC----HHHHHHH
T ss_pred HHHhCCCCCcchhHHH----hhcCcccCCcccccchHHHHHHHHHccCChhhCcC----HHHHHHH
Confidence 9999999997754433 33344445555566778999999999999999999 7777776
No 231
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.5e-38 Score=361.18 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=204.7
Q ss_pred ccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC--eE
Q 001902 663 NLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT--HV 740 (998)
Q Consensus 663 ~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~--~~ 740 (998)
..++|++.+.||+|+||.||+|.+..+|+.||+|++..... ......+.+|+.+++.++||||+++++++...+ ..
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~ 84 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF--LRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHK 84 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG--GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCE
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc--cchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCee
Confidence 35689999999999999999999999999999999986432 223466778999999999999999999998655 78
Q ss_pred EEEEecCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEE----ecCCcEEEEeccCcc
Q 001902 741 CLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLL----QGNGHVSLTDFDLSC 815 (998)
Q Consensus 741 ~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi----~~~g~vkL~DFG~a~ 815 (998)
|+|||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||++.
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999999999997642 2339999999999999999999999999999999999999 677789999999986
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--------CCCCChhHHHHHHHHHHHH
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--------AGHTSAVDWWALGILLYEM 887 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--------~~~~~~sDIwSlG~il~eL 887 (998)
..... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~~~----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el 216 (396)
T 4eut_A 165 ELEDD----------------------------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHA 216 (396)
T ss_dssp ECCCG----------------------------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EccCC----------------------------CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHH
Confidence 53211 11234579999999999865 4567799999999999999
Q ss_pred HcCCCCCCC----CChHHHHHHHHhCCCC-------------------CCCCCC----CcHHHHHHHHHccccCccCcCC
Q 001902 888 LYGYTPFRG----KTRQKTFANILHKDLK-------------------FPSSTP----TSLHAKQLMYRLLHRDPKSRLG 940 (998)
Q Consensus 888 ltG~~Pf~~----~~~~~~~~~i~~~~~~-------------------~~~~~~----~s~~l~~Ll~~~L~~dP~~Rpt 940 (998)
++|..||.. ......+..+..+... ++.... .+..+.+||.+||..||.+||+
T Consensus 217 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s 296 (396)
T 4eut_A 217 ATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWG 296 (396)
T ss_dssp HHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCC
T ss_pred HHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhcc
Confidence 999999964 2334555666654321 111111 3456789999999999999999
Q ss_pred Chhc
Q 001902 941 SHEG 944 (998)
Q Consensus 941 ~~~~ 944 (998)
+.++
T Consensus 297 ~~e~ 300 (396)
T 4eut_A 297 FDQF 300 (396)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
No 232
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=2.4e-37 Score=341.88 Aligned_cols=254 Identities=19% Similarity=0.218 Sum_probs=203.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEE-eeCCeEEE
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASF-QTKTHVCL 742 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~-~~~~~~~l 742 (998)
.++|++.+.||+|+||.||+|.+..+++.||+|++..... ...+.+|+.+++.++|++++..+.++ ...+..++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~l 82 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK-----HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVM 82 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS-----CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc-----hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEE
Confidence 4789999999999999999999999999999999875432 23577899999999988766555544 67788999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEe---cCCcEEEEeccCccccCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQ---GNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~---~~g~vkL~DFG~a~~~~~ 819 (998)
||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 83 v~e~~-~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 83 VMELL-GPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp EEECC-CCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred EEEec-CCCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 99999 999999997542 4599999999999999999999999999999999999994 789999999999966432
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCC-
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKT- 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~- 898 (998)
.... ...+........||+.|+|||++.+..++.++|||||||++|+|++|+.||.+..
T Consensus 161 ~~~~--------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 220 (296)
T 3uzp_A 161 ARTH--------------------QHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKA 220 (296)
T ss_dssp TTTC--------------------CBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCC
T ss_pred cccc--------------------cccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCc
Confidence 2110 0011123345689999999999999999999999999999999999999998743
Q ss_pred --hHHHHHHHHhCCCCCC---CCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 899 --RQKTFANILHKDLKFP---SSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 899 --~~~~~~~i~~~~~~~~---~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
....+..+.......+ ....++..+.+|+.+||+.||.+||++.++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l 271 (296)
T 3uzp_A 221 ATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYL 271 (296)
T ss_dssp SSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHH
T ss_pred hhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHH
Confidence 2233333333222222 113467899999999999999999995543
No 233
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=374.84 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=207.0
Q ss_pred ccCCccccc-ccCCCCceeEEEEEEc--cCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe
Q 001902 663 NLQHFRPIK-PLGSGDTGSVHLVELC--GSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH 739 (998)
Q Consensus 663 ~~~~y~~~~-~LG~G~~g~Vy~a~~~--~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~ 739 (998)
..+.|.+.. .||+|+||.||+|.+. .++..||||+++... .......+.+|+.+|++++||||+++++++.. +.
T Consensus 333 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~ 409 (613)
T 2ozo_A 333 KRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EA 409 (613)
T ss_dssp CTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC--SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SS
T ss_pred cccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC--ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CC
Confidence 344555555 7999999999999875 356789999998642 33456788999999999999999999999876 56
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCC
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSC 819 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~ 819 (998)
+|||||||++++|.+++... ...+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||++.....
T Consensus 410 ~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 410 LMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp EEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred eEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 89999999999999999764 35699999999999999999999999999999999999999999999999999965431
Q ss_pred CCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001902 820 KPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKT 898 (998)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~ 898 (998)
.... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||.+.+
T Consensus 489 ~~~~------------------------~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~ 544 (613)
T 2ozo_A 489 DDSY------------------------YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544 (613)
T ss_dssp -------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred CCce------------------------eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC
Confidence 1110 011122346789999999999999999999999999999998 999999988
Q ss_pred hHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 899 RQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 899 ~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
..+.+..+..+. ..+....++..+.+||.+||..||.+||++.++
T Consensus 545 ~~~~~~~i~~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l 589 (613)
T 2ozo_A 545 GPEVMAFIEQGK-RMECPPECPPELYALMSDCWIYKWEDRPDFLTV 589 (613)
T ss_dssp SHHHHHHHHTTC-CCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHH
T ss_pred HHHHHHHHHcCC-CCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 888777776653 233334578999999999999999999995553
No 234
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=356.11 Aligned_cols=250 Identities=17% Similarity=0.209 Sum_probs=200.7
Q ss_pred ccccCCcccccccCCCCceeEEEE-----EEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCccceeE
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLV-----ELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYA 732 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a-----~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~ 732 (998)
.+..++|.+.+.||+|+||.||+| .+..+++.||+|++... ....+..|+.+++.+. |+||+.+++
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~------~~~~~~~e~~~~~~l~~~~~~~iv~~~~ 134 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA------NPWEFYIGTQLMERLKPSMQHMFMKFYS 134 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC------CHHHHHHHHHHHHHSCGGGGGGBCCEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC------ChhHHHHHHHHHHHhhhhhhhhhhhhhe
Confidence 455678999999999999999999 46778999999998754 2346677888888886 899999999
Q ss_pred EEeeCCeEEEEEecCCCCchhHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec-------
Q 001902 733 SFQTKTHVCLITDYCPGGELFLLLDRQ---PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG------- 802 (998)
Q Consensus 733 ~~~~~~~~~lV~E~~~ggsL~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~------- 802 (998)
++...+..|||||||++|+|.+++... ....+++..++.++.||+.||+|||++|||||||||+|||++.
T Consensus 135 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 135 AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp EEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC--
T ss_pred eeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccc
Confidence 999999999999999999999999742 2456999999999999999999999999999999999999998
Q ss_pred ----CCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHH
Q 001902 803 ----NGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWW 878 (998)
Q Consensus 803 ----~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIw 878 (998)
++.+||+|||+|..+.... ........+||+.|+|||++.+..++.++|||
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~-------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 269 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFP-------------------------KGTIFTAKCETSGFQCVEMLSNKPWNYQIDYF 269 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSC-------------------------TTEEECCSSCTTSCCCHHHHTTCCBSTHHHHH
T ss_pred cccccCCEEEeeCchhhhhhccC-------------------------CCceeeeecCCCCCCChHHhcCCCCCccccHH
Confidence 8999999999996532110 11123456799999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHH
Q 001902 879 ALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANE 947 (998)
Q Consensus 879 SlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~e 947 (998)
||||++|+|++|+.||........ .....++ ....+..+.+++..||..+|.+|++..+.+.+
T Consensus 270 slG~il~elltg~~pf~~~~~~~~-----~~~~~~~-~~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 270 GVAATVYCMLFGTYMKVKNEGGEC-----KPEGLFR-RLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ 332 (365)
T ss_dssp HHHHHHHHHHHSSCCCEEEETTEE-----EECSCCT-TCSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHhCCCccccCCCCce-----eechhcc-ccCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence 999999999999999965432100 0011111 11346678899999999999999875443333
No 235
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.8e-37 Score=372.01 Aligned_cols=252 Identities=23% Similarity=0.343 Sum_probs=212.8
Q ss_pred ccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCC
Q 001902 659 GEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKT 738 (998)
Q Consensus 659 ~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~ 738 (998)
.+.+..++|++.+.||+|+||.||++.+.. +..||||+++.... ..+.+.+|+.+|++++|+||+++++++.. +
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~ 334 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-E 334 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSS----CHHHHHHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCC----CHHHHHHHHHHHHhCCCCCEeeEEEEEee-c
Confidence 345677889999999999999999999854 56799999986432 23578899999999999999999999876 6
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccC
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~ 818 (998)
.+|||||||++++|.+++.......+++..+..++.||+.||.|||++|||||||||+|||++.++.+||+|||++....
T Consensus 335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~ 414 (535)
T 2h8h_A 335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIE 414 (535)
T ss_dssp SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCC
T ss_pred cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecC
Confidence 78999999999999999976434568999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCC
Q 001902 819 CKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGK 897 (998)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~ 897 (998)
... ........++..|+|||++.+..++.++|||||||+||+|++ |..||.+.
T Consensus 415 ~~~--------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~ 468 (535)
T 2h8h_A 415 DNE--------------------------YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 468 (535)
T ss_dssp CHH--------------------------HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTC
T ss_pred CCc--------------------------eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 100 011123357889999999999999999999999999999999 99999998
Q ss_pred ChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 898 TRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 898 ~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
...+.+..+..+ ...+....++..+.+||.+||..||.+|||+.+
T Consensus 469 ~~~~~~~~i~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~ 513 (535)
T 2h8h_A 469 VNREVLDQVERG-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 513 (535)
T ss_dssp CHHHHHHHHHTT-CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHH
Confidence 888777776654 333444567889999999999999999999443
No 236
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=355.87 Aligned_cols=252 Identities=18% Similarity=0.223 Sum_probs=199.1
Q ss_pred CcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe-eCCeEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ-TKTHVC 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~-~~~~~~ 741 (998)
.|++.+.||+|+||.||+|.+..+ +..||+|.+... ........+.+|+.++++++||||+++++++. ..+..|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~ 167 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI--TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL 167 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC--SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC--CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeE
Confidence 588889999999999999998543 346899988742 34456678899999999999999999999864 456889
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCC
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKP 821 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~ 821 (998)
+||||+++++|.+++... ...++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 168 lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 168 VVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999999999764 3458899999999999999999999999999999999999999999999999996542111
Q ss_pred CCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChH
Q 001902 822 QLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQ 900 (998)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~ 900 (998)
.. .........+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.+.+..
T Consensus 247 ~~-----------------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~ 303 (373)
T 3c1x_A 247 FD-----------------------SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF 303 (373)
T ss_dssp ----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS
T ss_pred cc-----------------------cccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH
Confidence 00 0011233457889999999999999999999999999999999 78899887766
Q ss_pred HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 901 KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 901 ~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
.....+..+.. .+....++..+.+||.+||..||.+||++.++
T Consensus 304 ~~~~~~~~~~~-~~~p~~~~~~l~~li~~cl~~dp~~RPs~~el 346 (373)
T 3c1x_A 304 DITVYLLQGRR-LLQPEYCPDPLYEVMLKCWHPKAEMRPSFSEL 346 (373)
T ss_dssp CHHHHHHTTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 66666655432 23334578899999999999999999994443
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=345.96 Aligned_cols=256 Identities=20% Similarity=0.337 Sum_probs=207.3
Q ss_pred cccccCCcccccccCCCCceeEEEEE----EccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVE----LCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~----~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
..+..++|++++.||+|+||.||+|. +..+++.||+|++... .......+.+|+.+++.++||||+++++++.
T Consensus 36 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 112 (326)
T 2w1i_A 36 TQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS---TEEHLRDFEREIEILKSLQHDNIVKYKGVCY 112 (326)
T ss_dssp -CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC---CSHHHHHHHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred cccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC---CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEE
Confidence 34556789999999999999999998 4568999999998753 3455677889999999999999999999886
Q ss_pred eCC--eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccC
Q 001902 736 TKT--HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDL 813 (998)
Q Consensus 736 ~~~--~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~ 813 (998)
..+ .+++||||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~ 191 (326)
T 2w1i_A 113 SAGRRNLKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 191 (326)
T ss_dssp C----CCEEEECCCTTCBHHHHHHHST-TSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTT
T ss_pred ecCCCceEEEEECCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcc
Confidence 543 7899999999999999998753 4599999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+......... ........++..|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 192 ~~~~~~~~~~------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~ 247 (326)
T 2w1i_A 192 TKVLPQDKEY------------------------YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 247 (326)
T ss_dssp CEECCSSCSE------------------------EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCG
T ss_pred hhhccccccc------------------------cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCC
Confidence 8654321110 0112234578889999999988899999999999999999999999
Q ss_pred CCCCChH---------------HHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 894 FRGKTRQ---------------KTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 894 f~~~~~~---------------~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
|...... ..+...+......+....++..+.+||.+||..||.+|||+.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 312 (326)
T 2w1i_A 248 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 312 (326)
T ss_dssp GGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHH
Confidence 8643110 1122233333344445567899999999999999999999433
No 238
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=348.06 Aligned_cols=261 Identities=22% Similarity=0.268 Sum_probs=210.8
Q ss_pred cccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 658 SGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 658 ~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
....+..++|++.+.||+|+||.||+|.+.. .+|+|++..... .......+.+|+.++++++||||+++++++...
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERD-NEDQLKAFKREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSC-CCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCC-CHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3455778899999999999999999999854 499999875422 222334566799999999999999999999999
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+.+++||||+++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++ ++.+||+|||++...
T Consensus 102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~ 179 (319)
T 2y4i_B 102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSIS 179 (319)
T ss_dssp SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC--
T ss_pred CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccc
Confidence 9999999999999999999764 34599999999999999999999999999999999999998 789999999998553
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC---------CCCCChhHHHHHHHHHHHHH
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG---------AGHTSAVDWWALGILLYEML 888 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~---------~~~~~~sDIwSlG~il~eLl 888 (998)
...... ..........||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 180 ~~~~~~----------------------~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~ 237 (319)
T 2y4i_B 180 GVLQAG----------------------RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH 237 (319)
T ss_dssp ------------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred cccccc----------------------ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence 211000 00112234468999999999975 34788999999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 889 YGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 889 tG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
+|..||.+.........+.....+......++..+.+||.+||..||.+||| +.++++
T Consensus 238 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt----~~~l~~ 295 (319)
T 2y4i_B 238 AREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPT----FTKLMD 295 (319)
T ss_dssp HSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCC----HHHHHH
T ss_pred hCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcC----HHHHHH
Confidence 9999999988888777777665544444467889999999999999999999 555554
No 239
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.1e-37 Score=373.31 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=203.4
Q ss_pred cccCCCCceeEEEEEE--ccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEEecCC
Q 001902 671 KPLGSGDTGSVHLVEL--CGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~--~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~E~~~ 748 (998)
+.||+|+||.||+|.+ ..+++.||||+++... .+......+.+|+.+|++++||||+++++++.. +..+||||||+
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~ 452 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEA-NDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAE 452 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGG-GCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccC
Confidence 4799999999999965 4567899999998653 344456789999999999999999999999865 55889999999
Q ss_pred CCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 749 GGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 749 ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
+++|.+++... ..+++..+..++.||+.||+|||++|||||||||+||||+.++.+||+|||++.........
T Consensus 453 ~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~----- 525 (635)
T 4fl3_A 453 LGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 525 (635)
T ss_dssp TEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-----
Confidence 99999999764 45999999999999999999999999999999999999999999999999999654321110
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 907 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~ 907 (998)
........||+.|+|||++.+..++.++|||||||++|+|++ |..||.+.+.......+.
T Consensus 526 -------------------~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~ 586 (635)
T 4fl3_A 526 -------------------YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE 586 (635)
T ss_dssp ----------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH
T ss_pred -------------------cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence 011223357889999999999999999999999999999998 999999998887777776
Q ss_pred hCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChhcH
Q 001902 908 HKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGA 945 (998)
Q Consensus 908 ~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a 945 (998)
.+. ..+....++.++.+||.+||..||.+||++.+++
T Consensus 587 ~~~-~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 587 KGE-RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVE 623 (635)
T ss_dssp TTC-CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred cCC-CCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 653 2333445789999999999999999999954443
No 240
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=4.5e-37 Score=341.87 Aligned_cols=253 Identities=21% Similarity=0.261 Sum_probs=201.1
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccc-cChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEEEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRNKVHRACAEREILDMLDHPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.|...+.||+|+||.||+|.+ +++.||+|++..... ........+.+|+.+++.++||||+++++++...+..|+||
T Consensus 32 ~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 109 (307)
T 2nru_A 32 ISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY 109 (307)
T ss_dssp TTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred ccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence 455668999999999999986 688999999875432 23445677889999999999999999999999999999999
Q ss_pred ecCCCCchhHHHhhC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCC
Q 001902 745 DYCPGGELFLLLDRQ-PTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQL 823 (998)
Q Consensus 745 E~~~ggsL~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~ 823 (998)
||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 188 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQ- 188 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSS-
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccc-
Confidence 999999999998743 234699999999999999999999999999999999999999999999999999865331110
Q ss_pred CCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHH--
Q 001902 824 LLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQK-- 901 (998)
Q Consensus 824 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~-- 901 (998)
........||+.|+|||.+.+ .++.++|||||||++|+|++|..||.+.....
T Consensus 189 ------------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~ 243 (307)
T 2nru_A 189 ------------------------TVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLL 243 (307)
T ss_dssp ------------------------CEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBT
T ss_pred ------------------------cccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHH
Confidence 011234579999999999865 47889999999999999999999998754322
Q ss_pred --HHHHHHhCCC--------CCC-CCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHc
Q 001902 902 --TFANILHKDL--------KFP-SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKK 950 (998)
Q Consensus 902 --~~~~i~~~~~--------~~~-~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~ 950 (998)
....+..... ..+ .....+..+.+|+.+||+.||.+||| +.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps----~~~l~~ 299 (307)
T 2nru_A 244 LDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPD----IKKVQQ 299 (307)
T ss_dssp THHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCC----HHHHHH
T ss_pred HHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcC----HHHHHH
Confidence 1122221111 011 11223457889999999999999999 666654
No 241
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=8.8e-37 Score=344.07 Aligned_cols=267 Identities=22% Similarity=0.352 Sum_probs=195.4
Q ss_pred cccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHH--HHhCCCCCccceeEEEe--
Q 001902 660 EQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREI--LDMLDHPFVPALYASFQ-- 735 (998)
Q Consensus 660 ~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~i--l~~l~h~nIv~l~~~~~-- 735 (998)
..+..++|++++.||+|+||.||+|.+ +++.||+|++.... ...+..|.++ +..++||||+++++.+.
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~------~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~ 79 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN------RQNFINEKNIYRVPLMEHDNIARFIVGDERV 79 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG------HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCcchhhheeccccc
Confidence 356788999999999999999999987 78999999987532 2334444444 44589999999998653
Q ss_pred ---eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CceeccCCCCcEEEecC
Q 001902 736 ---TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ---------GIIYRDLKPENVLLQGN 803 (998)
Q Consensus 736 ---~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---------~IiHrDLkP~NILi~~~ 803 (998)
....+|+|||||++++|.+++... ..++..+..++.||+.||.|||++ ||+||||||+|||++.+
T Consensus 80 ~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~ 156 (336)
T 3g2f_A 80 TADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND 156 (336)
T ss_dssp CTTSCEEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTT
T ss_pred ccCCCceEEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCC
Confidence 234679999999999999999764 358899999999999999999999 99999999999999999
Q ss_pred CcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC-------CCCCChhH
Q 001902 804 GHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG-------AGHTSAVD 876 (998)
Q Consensus 804 g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~-------~~~~~~sD 876 (998)
+.+||+|||++........... ..........+||+.|+|||++.+ ..++.++|
T Consensus 157 ~~~kL~DFG~a~~~~~~~~~~~-------------------~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~D 217 (336)
T 3g2f_A 157 GTCVISDFGLSMRLTGNRLVRP-------------------GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVD 217 (336)
T ss_dssp SCEEECCCTTCEECSSSSCC----------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHH
T ss_pred CcEEEeeccceeecccccccCc-------------------cccccccccCCCccceeCchhhcCCcccccccccccccc
Confidence 9999999999976542211100 001122335579999999999987 34567899
Q ss_pred HHHHHHHHHHHHcCCCCCCCCCh-----------------HHHHHHHHhCC---CCCCCC----CCCcHHHHHHHHHccc
Q 001902 877 WWALGILLYEMLYGYTPFRGKTR-----------------QKTFANILHKD---LKFPSS----TPTSLHAKQLMYRLLH 932 (998)
Q Consensus 877 IwSlG~il~eLltG~~Pf~~~~~-----------------~~~~~~i~~~~---~~~~~~----~~~s~~l~~Ll~~~L~ 932 (998)
||||||++|+|++|..||..... ........... ..++.. ...+..+.+||.+||.
T Consensus 218 iwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 297 (336)
T 3g2f_A 218 MYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWD 297 (336)
T ss_dssp HHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhc
Confidence 99999999999999777643211 11222222221 122211 1134579999999999
Q ss_pred cCccCcCCChhcHHHH--HcCCCccC
Q 001902 933 RDPKSRLGSHEGANEI--KKHPFFKG 956 (998)
Q Consensus 933 ~dP~~Rpt~~~~a~el--L~Hp~f~~ 956 (998)
.||.+|||+.++++.| +.++|-++
T Consensus 298 ~dP~~Rps~~e~l~~L~~ll~~~~~~ 323 (336)
T 3g2f_A 298 QDAEARLTAQXAEERMAELMMIWERN 323 (336)
T ss_dssp SSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred CChhhCcchHHHHHHHHHHHHHHHhc
Confidence 9999999955443333 44666654
No 242
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-37 Score=375.56 Aligned_cols=261 Identities=27% Similarity=0.403 Sum_probs=209.1
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEee------C
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQT------K 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~------~ 737 (998)
.++|++.+.||+|+||.||+|.+..+|+.||+|++... ........+.+|+.+++.++||||+++++++.. .
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~--~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~ 90 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPN 90 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC--CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTT
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCC
Confidence 36899999999999999999999999999999998754 244556778899999999999999999998765 6
Q ss_pred CeEEEEEecCCCCchhHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCc---EEEEeccC
Q 001902 738 THVCLITDYCPGGELFLLLDRQP-TKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGH---VSLTDFDL 813 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~---vkL~DFG~ 813 (998)
+..|+|||||+|++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++.++. +||+|||+
T Consensus 91 ~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 91 DLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp SSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred CeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 78899999999999999998642 235899999999999999999999999999999999999997764 99999999
Q ss_pred ccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 814 SCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 814 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
+...... .......||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus 171 a~~~~~~----------------------------~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~P 222 (676)
T 3qa8_A 171 AKELDQG----------------------------ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222 (676)
T ss_dssp CCBTTSC----------------------------CCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSS
T ss_pred ccccccc----------------------------cccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCC
Confidence 8653211 112345799999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHH--------------HhCCCCCCC--------CCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcC
Q 001902 894 FRGKTRQKTFANI--------------LHKDLKFPS--------STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKH 951 (998)
Q Consensus 894 f~~~~~~~~~~~i--------------~~~~~~~~~--------~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~H 951 (998)
|.+.......... ..+...+.. ....+..+.+||.+||..||.+||| +.++++|
T Consensus 223 f~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPT----a~elL~h 298 (676)
T 3qa8_A 223 FLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGT----DPQNPNV 298 (676)
T ss_dssp CCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---C----CTTCCCC
T ss_pred CCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcC----HHHHhcC
Confidence 9775433221100 011111111 1124678999999999999999999 8888999
Q ss_pred CCccCCC
Q 001902 952 PFFKGVN 958 (998)
Q Consensus 952 p~f~~~~ 958 (998)
|||+.++
T Consensus 299 p~F~~l~ 305 (676)
T 3qa8_A 299 GCFQALD 305 (676)
T ss_dssp TTHHHHH
T ss_pred HHHHHHH
Confidence 9999853
No 243
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-36 Score=340.62 Aligned_cols=250 Identities=26% Similarity=0.381 Sum_probs=194.5
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC--CCCCccceeEEEeeC----
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML--DHPFVPALYASFQTK---- 737 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l--~h~nIv~l~~~~~~~---- 737 (998)
.++|++++.||+|+||.||+|.+ +++.||+|++... .......|.+++..+ +||||+++++++...
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 36 AKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTT------EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGG------GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEecc------ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 46899999999999999999998 4899999998643 123444566666554 999999999999877
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CceeccCCCCcEEEecCCcEEEE
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------GIIYRDLKPENVLLQGNGHVSLT 809 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------~IiHrDLkP~NILi~~~g~vkL~ 809 (998)
..+|+||||+++++|.+++... .+++..+..++.||+.||.|||++ ||+||||||+|||++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 7899999999999999999764 499999999999999999999998 99999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCCh------hHHHHHHHH
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSA------VDWWALGIL 883 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~------sDIwSlG~i 883 (998)
|||++......... .........||+.|+|||++.+..++.. +|||||||+
T Consensus 185 Dfg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i 241 (337)
T 3mdy_A 185 DLGLAVKFISDTNE-----------------------VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLI 241 (337)
T ss_dssp CCTTCEECC--------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHH
T ss_pred eCCCceeecccccc-----------------------ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHH
Confidence 99998654311110 0011234579999999999988766654 999999999
Q ss_pred HHHHHcC----------CCCCCCCC----hHHHHHHHHhC-CC--CCCC---CCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 884 LYEMLYG----------YTPFRGKT----RQKTFANILHK-DL--KFPS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 884 l~eLltG----------~~Pf~~~~----~~~~~~~i~~~-~~--~~~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+|+|++| ..||.... ........... .. .++. ...++..+.+||.+||+.||.+|||
T Consensus 242 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps--- 318 (337)
T 3mdy_A 242 LWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLT--- 318 (337)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCC---
T ss_pred HHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCC---
Confidence 9999999 77775432 22233333322 11 1111 1134567899999999999999999
Q ss_pred cHHHHHcC
Q 001902 944 GANEIKKH 951 (998)
Q Consensus 944 ~a~elL~H 951 (998)
+.++++|
T Consensus 319 -~~ell~~ 325 (337)
T 3mdy_A 319 -ALRVKKT 325 (337)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 6666655
No 244
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=4.3e-38 Score=355.22 Aligned_cols=247 Identities=17% Similarity=0.192 Sum_probs=194.3
Q ss_pred cccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeeccccc-----ChhHHHHHHHHHHHHHhCC---------CCCc
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVML-----NRNKVHRACAEREILDMLD---------HPFV 727 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~-----~~~~~~~~~~E~~il~~l~---------h~nI 727 (998)
+..++|++++.||+|+||.||+|.+ +|+.||+|++...... .......+.+|+.+++.++ ||||
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence 4457899999999999999999998 7899999999865321 2333467888999998886 7777
Q ss_pred cceeEEE-----------------ee-------------CCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHH
Q 001902 728 PALYASF-----------------QT-------------KTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVV 777 (998)
Q Consensus 728 v~l~~~~-----------------~~-------------~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil 777 (998)
+++++.+ .. .+.+|||||||++|++.+.+.+ ..+++..++.++.||+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLT 171 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHH
Confidence 7666654 22 6889999999999977666644 3489999999999999
Q ss_pred HHHHHHH-HCCceeccCCCCcEEEecCC--------------------cEEEEeccCccccCCCCCCCCCcchhhhhccc
Q 001902 778 VALEYLH-CQGIIYRDLKPENVLLQGNG--------------------HVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHK 836 (998)
Q Consensus 778 ~aL~~LH-~~~IiHrDLkP~NILi~~~g--------------------~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~ 836 (998)
.||.||| ++||+||||||+|||++.++ .+||+|||+|+...
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~------------------ 233 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLER------------------ 233 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEE------------------
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecC------------------
Confidence 9999999 99999999999999999887 89999999996532
Q ss_pred CCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHH-HHHHHcCCCCCCCCCh-HHHHHHHHhC-CCCC
Q 001902 837 GQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGIL-LYEMLYGYTPFRGKTR-QKTFANILHK-DLKF 913 (998)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~i-l~eLltG~~Pf~~~~~-~~~~~~i~~~-~~~~ 913 (998)
....+||+.|+|||++.+.. +.++||||||++ .+++++|..||.+... ......+... ....
T Consensus 234 --------------~~~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 298 (336)
T 2vuw_A 234 --------------DGIVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT 298 (336)
T ss_dssp --------------TTEEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS
T ss_pred --------------CCcEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc
Confidence 11347999999999998776 889999998777 7778889999954321 1122333322 1111
Q ss_pred CC----CCCCcHHHHHHHHHccccCccCcCCChhcHHHHH-cCCCcc
Q 001902 914 PS----STPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIK-KHPFFK 955 (998)
Q Consensus 914 ~~----~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL-~Hp~f~ 955 (998)
.. ...++.++.+||.+||++| | +.++| +||||+
T Consensus 299 ~~~~~~~~~~s~~~~dli~~~L~~d-----s----a~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 KCNTPAMKQIKRKIQEFHRTMLNFS-----S----ATDLLCQHSLFK 336 (336)
T ss_dssp CCCSHHHHHHHHHHHHHHHHGGGSS-----S----HHHHHHHCGGGC
T ss_pred ccchhhhhhcCHHHHHHHHHHhccC-----C----HHHHHhcCCCcC
Confidence 11 1235778999999999977 7 99999 999996
No 245
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-37 Score=360.54 Aligned_cols=254 Identities=18% Similarity=0.151 Sum_probs=199.2
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC-CCc---------ccee--
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH-PFV---------PALY-- 731 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h-~nI---------v~l~-- 731 (998)
...|+..+.||+|+||.||+|.+..+|+.||||++...........+.+.+|+.+++.+.| .|. +...
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 3458888999999999999999999999999999885443344446778899999999977 221 1111
Q ss_pred ----------EEEee-----CCeEEEEEecCCCCchhHHHh-----hCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceec
Q 001902 732 ----------ASFQT-----KTHVCLITDYCPGGELFLLLD-----RQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYR 791 (998)
Q Consensus 732 ----------~~~~~-----~~~~~lV~E~~~ggsL~~~l~-----~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHr 791 (998)
.++.. ....+++|+++ +++|.+++. ......+++..+..++.||+.||+|||++|||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHr 235 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHT 235 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccC
Confidence 11111 23467888877 889999885 2233458888999999999999999999999999
Q ss_pred cCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhh-----
Q 001902 792 DLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEII----- 866 (998)
Q Consensus 792 DLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l----- 866 (998)
||||+|||++.++.+||+|||+++.... .....+| +.|+|||++
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~------------------------------~~~~~~g-~~y~aPE~~~~~~~ 284 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------------------SAVSPIG-RGFAPPETTAERML 284 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTE------------------------------EECCCCC-TTTCCHHHHHHHTS
T ss_pred CcccceEEEecCCeEEEEeccceeecCC------------------------------ccccCCC-CceeCchhhhcccc
Confidence 9999999999999999999999854320 1234568 999999999
Q ss_pred -----cCCCCCChhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCC
Q 001902 867 -----AGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGS 941 (998)
Q Consensus 867 -----~~~~~~~~sDIwSlG~il~eLltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~ 941 (998)
.+..++.++|||||||++|+|++|+.||.+.+.......+.. ....++..+.+||.+||..||.+||+
T Consensus 285 ~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~------~~~~~~~~~~~li~~~l~~dP~~Rpt- 357 (413)
T 3dzo_A 285 PFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR------SCKNIPQPVRALLEGFLRYPKEDRLL- 357 (413)
T ss_dssp TTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS------SCCCCCHHHHHHHHHHTCSSGGGSCC-
T ss_pred ccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh------hcccCCHHHHHHHHHHccCChhhCcC-
Confidence 555688899999999999999999999988765443333322 22356789999999999999999999
Q ss_pred hhcHHHHHcCCCccCCCh
Q 001902 942 HEGANEIKKHPFFKGVNW 959 (998)
Q Consensus 942 ~~~a~elL~Hp~f~~~~~ 959 (998)
+.++++||||+.+..
T Consensus 358 ---~~~~l~~~~~~~~~~ 372 (413)
T 3dzo_A 358 ---PLQAMETPEYEQLRT 372 (413)
T ss_dssp ---HHHHTTSHHHHHHHH
T ss_pred ---HHHHHhCHHHHHHHH
Confidence 999999999998644
No 246
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=9.6e-36 Score=364.65 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=209.5
Q ss_pred ccccCCcccccccCCCCceeEEEEEEccC---CeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeC
Q 001902 661 QINLQHFRPIKPLGSGDTGSVHLVELCGS---GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTK 737 (998)
Q Consensus 661 ~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~---~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~ 737 (998)
.+..++|++.+.||+|+||.||+|.+..+ +..+|+|.+... ........+.+|+.++++++||||+++++++. .
T Consensus 386 ~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 386 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC--TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp BCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST--TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc--CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 34567899999999999999999998643 568999988753 23445577889999999999999999999985 4
Q ss_pred CeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcccc
Q 001902 738 THVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLT 817 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~ 817 (998)
+..|+||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++...
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~ 541 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYM 541 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSC
T ss_pred CceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeec
Confidence 6689999999999999999865 345999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCC
Q 001902 818 SCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRG 896 (998)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~ 896 (998)
..... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus 542 ~~~~~--------------------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~ 595 (656)
T 2j0j_A 542 EDSTY--------------------------YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQG 595 (656)
T ss_dssp CC------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCCcc--------------------------eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCC
Confidence 31110 11123457889999999998999999999999999999997 9999999
Q ss_pred CChHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 897 KTRQKTFANILHKDLKFPSSTPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 897 ~~~~~~~~~i~~~~~~~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
.+....+..+..... .+....++..+.+||.+||..||.+||++.+
T Consensus 596 ~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~dP~~RPs~~e 641 (656)
T 2j0j_A 596 VKNNDVIGRIENGER-LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTE 641 (656)
T ss_dssp CCHHHHHHHHHHTCC-CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCHHHHHHHHHcCCC-CCCCccccHHHHHHHHHHcCCChhHCcCHHH
Confidence 988888877776542 2333457889999999999999999999443
No 247
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=2.4e-36 Score=333.12 Aligned_cols=232 Identities=16% Similarity=0.137 Sum_probs=191.2
Q ss_pred hccccccccCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 656 LDSGEQINLQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 656 ~~~~~~~~~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
+.+|..+..++|++.+.||+|+||.||+|.+..+++.||+|++.............+.+|+.++..++||||+++++++.
T Consensus 22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 101 (286)
T 3uqc_A 22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH 101 (286)
T ss_dssp CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE
Confidence 34555566688999999999999999999999999999999998776555666788899999999999999999999999
Q ss_pred eCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 736 TKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 736 ~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
..+..|+||||++|++|.+++... .....+..++.||+.||.|||++||+||||||+|||++.+|.+||+++|.
T Consensus 102 ~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~~-- 175 (286)
T 3uqc_A 102 TRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPAT-- 175 (286)
T ss_dssp ETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCCC--
T ss_pred ECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEeccc--
Confidence 999999999999999999999542 45567888999999999999999999999999999999999999985542
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
++ .++.++|||||||++|+|++|+.||.
T Consensus 176 ---------------------------------------------~~-------~~~~~~Di~slG~il~elltg~~Pf~ 203 (286)
T 3uqc_A 176 ---------------------------------------------MP-------DANPQDDIRGIGASLYALLVNRWPLP 203 (286)
T ss_dssp ---------------------------------------------CT-------TCCHHHHHHHHHHHHHHHHHSEECSC
T ss_pred ---------------------------------------------cC-------CCCchhHHHHHHHHHHHHHHCCCCCC
Confidence 22 26789999999999999999999998
Q ss_pred CCChHHHHH---HHHhCCCCCC--CCCCCcHHHHHHHHHccccCccCcCCChhcHH
Q 001902 896 GKTRQKTFA---NILHKDLKFP--SSTPTSLHAKQLMYRLLHRDPKSRLGSHEGAN 946 (998)
Q Consensus 896 ~~~~~~~~~---~i~~~~~~~~--~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~ 946 (998)
+.+....+. .........+ ....++..+.+||.+||..||.+| |+.++++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~ 258 (286)
T 3uqc_A 204 EAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLN 258 (286)
T ss_dssp CCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred cCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHH
Confidence 865432111 1111111111 123468899999999999999999 9444433
No 248
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.9e-36 Score=339.47 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=198.8
Q ss_pred cCCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCccceeEEEeeCC---
Q 001902 664 LQHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT--- 738 (998)
Q Consensus 664 ~~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~--- 738 (998)
.++|++.+.||+|+||.||+|.+ +|+.||+|++... ....+..|.+++.. ++||||+++++++....
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 41 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG------GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred cccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch------hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 36799999999999999999998 5899999998643 23567788999988 79999999999998775
Q ss_pred -eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEEecCCcEEEE
Q 001902 739 -HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLT 809 (998)
Q Consensus 739 -~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~~IiHrDLkP~NILi~~~g~vkL~ 809 (998)
.+|+||||+++++|.+++.+. .+++..++.++.||+.||.||| ++||+||||||+|||++.++.+||+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~ 189 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA 189 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC
T ss_pred ceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE
Confidence 899999999999999999763 4899999999999999999999 8999999999999999999999999
Q ss_pred eccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCC------CCChhHHHHHHHH
Q 001902 810 DFDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAG------HTSAVDWWALGIL 883 (998)
Q Consensus 810 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~------~~~~sDIwSlG~i 883 (998)
|||++......... .........||+.|+|||++.+.. ++.++|||||||+
T Consensus 190 Dfg~~~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~i 246 (342)
T 1b6c_B 190 DLGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 246 (342)
T ss_dssp CCTTCEEEETTTTE-----------------------EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHH
T ss_pred ECCCceeccccccc-----------------------cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHH
Confidence 99998654311100 001223457999999999997763 3368999999999
Q ss_pred HHHHHcC----------CCCCCCCC-----hHHHHHHHHhCCCCC--CC---CCCCcHHHHHHHHHccccCccCcCCChh
Q 001902 884 LYEMLYG----------YTPFRGKT-----RQKTFANILHKDLKF--PS---STPTSLHAKQLMYRLLHRDPKSRLGSHE 943 (998)
Q Consensus 884 l~eLltG----------~~Pf~~~~-----~~~~~~~i~~~~~~~--~~---~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~ 943 (998)
+|+|++| ..||.... .......+....... +. ....+..+.+||.+||..||.+|||
T Consensus 247 l~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps--- 323 (342)
T 1b6c_B 247 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLT--- 323 (342)
T ss_dssp HHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCC---
T ss_pred HHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCC---
Confidence 9999999 78987642 223333333332221 11 1123357889999999999999999
Q ss_pred cHHHHHcC
Q 001902 944 GANEIKKH 951 (998)
Q Consensus 944 ~a~elL~H 951 (998)
+.++++|
T Consensus 324 -~~~i~~~ 330 (342)
T 1b6c_B 324 -ALRIKKT 330 (342)
T ss_dssp -HHHHHHH
T ss_pred -HHHHHHH
Confidence 6666654
No 249
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.1e-37 Score=345.51 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=179.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHh--CCCCCccceeEEEeeCC----
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDM--LDHPFVPALYASFQTKT---- 738 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~--l~h~nIv~l~~~~~~~~---- 738 (998)
++|++.+.||+|+||.||+|.+ +++.||+|++... ....+..|.+++.. ++||||+++++++....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~------~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 74 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR------EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWT 74 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T------THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSE
T ss_pred ceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc------chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccc
Confidence 5799999999999999999987 5889999998643 23456678888877 79999999999998776
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCceeccCCCCcEEEecCCcEEEEe
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH--------CQGIIYRDLKPENVLLQGNGHVSLTD 810 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH--------~~~IiHrDLkP~NILi~~~g~vkL~D 810 (998)
.+++||||+++++|.+++.+. .+++..+..++.|++.||.||| ++||+||||||+|||++.++.+||+|
T Consensus 75 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 151 (303)
T 3gxj_A 75 QLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEEEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCC
T ss_pred eeEEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEee
Confidence 899999999999999999763 4888899999999999999999 99999999999999999999999999
Q ss_pred ccCccccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCC------CCCChhHHHHHHHHH
Q 001902 811 FDLSCLTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGA------GHTSAVDWWALGILL 884 (998)
Q Consensus 811 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~------~~~~~sDIwSlG~il 884 (998)
||++......... .........||+.|+|||++.+. .++.++|||||||++
T Consensus 152 Fg~a~~~~~~~~~-----------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il 208 (303)
T 3gxj_A 152 LGLAVRHDSATDT-----------------------IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVF 208 (303)
T ss_dssp CCC-CCEETTTTE-----------------------ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC
T ss_pred cCcceeccCCCcc-----------------------cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHH
Confidence 9998654311110 00112344799999999999776 334689999999999
Q ss_pred HHHHcC----------CCCCCCCCh-----HHHHHHHHhCCCCCCCC-----CCCcHHHHHHHHHccccCccCcCCChhc
Q 001902 885 YEMLYG----------YTPFRGKTR-----QKTFANILHKDLKFPSS-----TPTSLHAKQLMYRLLHRDPKSRLGSHEG 944 (998)
Q Consensus 885 ~eLltG----------~~Pf~~~~~-----~~~~~~i~~~~~~~~~~-----~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~ 944 (998)
|+|++| ..||..... ......+.......... ...+..+.+|+.+||..||.+|||+.++
T Consensus 209 ~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i 288 (303)
T 3gxj_A 209 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRI 288 (303)
T ss_dssp -CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHH
T ss_pred HHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHH
Confidence 999999 778755321 22223333322221111 1223478999999999999999994443
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.4e-35 Score=366.29 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=197.6
Q ss_pred cccCCcccccccCCCCceeEEEEEEcc-CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEeeCCe-
Q 001902 662 INLQHFRPIKPLGSGDTGSVHLVELCG-SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQTKTH- 739 (998)
Q Consensus 662 ~~~~~y~~~~~LG~G~~g~Vy~a~~~~-~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~- 739 (998)
+..++|++++.||+|+||.||+|.+.. +|+.||||++... ........+.+|+.++++++||||+++++++...+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 154 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS--GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRH 154 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS--CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTT
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc--CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCC
Confidence 335799999999999999999999976 7999999998753 234556678899999999999999999999987655
Q ss_pred ----EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 740 ----VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 740 ----~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
.||||||++|++|.+++.. .+++..++.++.||+.||.|||++|||||||||+|||++.+ .+||+|||++.
T Consensus 155 ~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 155 GDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp SCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred CCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccch
Confidence 7999999999999988754 49999999999999999999999999999999999999975 99999999985
Q ss_pred ccCCCCCCCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 816 LTSCKPQLLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
.... .....||+.|+|||++.+.. +.++|||||||++|+|++|.+||.
T Consensus 230 ~~~~-------------------------------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~ 277 (681)
T 2pzi_A 230 RINS-------------------------------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRN 277 (681)
T ss_dssp ETTC-------------------------------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEET
T ss_pred hccc-------------------------------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCc
Confidence 4320 13457999999999997654 889999999999999999999987
Q ss_pred CCChHHHHHHHHhCCCC-CCCCCCCcHHHHHHHHHccccCccCcCCChhcHHHHHcCCCccC
Q 001902 896 GKTRQKTFANILHKDLK-FPSSTPTSLHAKQLMYRLLHRDPKSRLGSHEGANEIKKHPFFKG 956 (998)
Q Consensus 896 ~~~~~~~~~~i~~~~~~-~~~~~~~s~~l~~Ll~~~L~~dP~~Rpt~~~~a~elL~Hp~f~~ 956 (998)
+.... .++ .......+..+.+||.+||..||.+||+ ..+.+.|+|+.-
T Consensus 278 ~~~~~---------~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~----~~~~l~~~l~~~ 326 (681)
T 2pzi_A 278 GRYVD---------GLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFT----TAEEMSAQLTGV 326 (681)
T ss_dssp TEECS---------SCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCS----SHHHHHHHHHHH
T ss_pred ccccc---------cccccccccccCHHHHHHHhhhccCChhhCCC----HHHHHHHHHHHH
Confidence 53210 010 0000113467899999999999999999 666677777643
No 251
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.98 E-value=1.1e-30 Score=277.31 Aligned_cols=217 Identities=22% Similarity=0.448 Sum_probs=201.2
Q ss_pred cEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEE
Q 001902 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNL 280 (998)
Q Consensus 201 ~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~ 280 (998)
.|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.++++.+++||+.+|+.
T Consensus 1 ~i~i~D~---~g~i~~~N~a~~~l~Gy~~~el~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~ 77 (227)
T 3ewk_A 1 LVSITDL---QGRILYANDNFCAVSRYGREELVGQDHRIVNSGYHGKAYIRDMWRTISRGNIWQGEFCNRRKDGTRYWVD 77 (227)
T ss_dssp CEEEEET---TCBEEEECHHHHHHTTCCHHHHTTSBGGGGCCSCSCHHHHHHHHHHHTTTCCEEEEEEEECSSSCEEEEE
T ss_pred CEEEECC---CCcEEehHHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCeEEEEEEEEcCCCCEEeee
Confidence 3788998 7889999999999999999999999998888777777888888999999999999999999999999999
Q ss_pred eeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhHhhHHHHHHHccCCCCccccCCCCc
Q 001902 281 LTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMATSSVTELVQAMKKPRSLSESTNRPP 360 (998)
Q Consensus 281 ~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 360 (998)
+++.|++|.+|.+.+++++.+|||++|++|++++.
T Consensus 78 ~~~~p~~d~~g~~~~~~~~~~DIT~~k~~e~~l~~--------------------------------------------- 112 (227)
T 3ewk_A 78 STIVPLMDNAGKPRQYISIRRDITAQKEAEAQLAR--------------------------------------------- 112 (227)
T ss_dssp EEEEEEECSSSCEEEEEEEEEECTTTTHHHHHHHH---------------------------------------------
T ss_pred eEEEEEEcCCCCEEEEEEEEEehhhHHHHHHHHHH---------------------------------------------
Confidence 99999999999999999999999999999887432
Q ss_pred ccccCCCCchhhhcccccCCCCCCCCCCCCCCCCCCcccccccccccchhhccccCCccccccccccccCCCCCCCcccc
Q 001902 361 IIRKSEGGVEEERAGALGRRKSENVPPPRRNSYGGGCRTSMQRISEVPEKKKQKSGRRSFMGLIGRKSQSTDDHDSFENE 440 (998)
Q Consensus 361 ~~~~~~~~~~~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 440 (998)
T Consensus 113 -------------------------------------------------------------------------------- 112 (227)
T 3ewk_A 113 -------------------------------------------------------------------------------- 112 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCCCCCCCCCCCCCchhhHHHHHhhhccccHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCC
Q 001902 441 IIMEGDDDYESDDERPDSVDDKVRQKEMRKGIDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC 520 (998)
Q Consensus 441 ~~~~~~~~~~~~~~~~di~er~~~e~e~r~~~~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~ 520 (998)
++.++++++++|+++|.+|+ |+++|++|++++||+.+|++|++.
T Consensus 113 ---------------------------------~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~e~~g~~~ 156 (227)
T 3ewk_A 113 ---------------------------------LKQAMDANSEMILLTDRAGR---IIYANPALCRFSGMAEGELLGQSP 156 (227)
T ss_dssp ---------------------------------HHHHHHTCCSEEEEECTTSC---EEEECHHHHHHHTCCTHHHHSSCG
T ss_pred ---------------------------------HHHHHhcCcCeEEEEcCCCc---EEEEchHHHHHhCCCHHHHcCCCh
Confidence 46688999999999999887 999999999999999999999999
Q ss_pred ccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCc------EEEEEEEEeeeccCC----EEEEEEec
Q 001902 521 RFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK------KFWNLFHLQPMRDQK----YFIGVQLD 581 (998)
Q Consensus 521 ~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~------~~wv~~~~spi~d~~----~~vgi~rD 581 (998)
..+.++.........+++.+..+..+.+|++.++|||+ .+|++++++|++|.+ +++++++|
T Consensus 157 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 157 SILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIHTDGNGLVGYVQIQHD 227 (227)
T ss_dssp GGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEECSSSCEEEEEEEEEC
T ss_pred hhccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEECCCCCEEEEEEEecC
Confidence 99999999999999999999999999999999999997 899999999999876 89999987
No 252
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=1.1e-28 Score=296.93 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=135.3
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccC-------hhHHHHHHHHHHHHHhC-CCCCccceeEEEeeCCeEEE
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN-------RNKVHRACAEREILDML-DHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~-------~~~~~~~~~E~~il~~l-~h~nIv~l~~~~~~~~~~~l 742 (998)
..++.|++|.+..++....|+.|++|++.+..... ....+.+.+|+++|+++ .|+||+++++++.+++.+||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 45688888888888888889999999998653221 23345688999999999 79999999999999999999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
|||||+|++|.+++.+. +.++.. .|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 320 VMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~-- 392 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD-- 392 (569)
T ss_dssp EEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC----
T ss_pred EEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC--
Confidence 99999999999999875 446654 57899999999999999999999999999999999999999998654211
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHcCCCC
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLYGYTP 893 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLltG~~P 893 (998)
.....+.+||+.|||||++.+. +..++|+||+|+++|.|.+|..+
T Consensus 393 -------------------------~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 393 -------------------------CSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp --------------------------CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred -------------------------CccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence 1123456899999999998764 56789999999998877654433
No 253
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=2.1e-24 Score=258.05 Aligned_cols=194 Identities=16% Similarity=0.164 Sum_probs=146.5
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh-----hHHHHHHHHHHHHHhCCCCCccceeEEEeeCCeEEE
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR-----NKVHRACAEREILDMLDHPFVPALYASFQTKTHVCL 742 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~-----~~~~~~~~E~~il~~l~h~nIv~l~~~~~~~~~~~l 742 (998)
...+.||+|+||.||++. ..++.+++|.......... ...+.+.+|+.++++++||||+++..++...+..||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~l 416 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRI 416 (540)
T ss_dssp ---------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEE
T ss_pred CCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEE
Confidence 345689999999999994 4678899998765333222 224567899999999999999966666667777899
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCC
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQ 822 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~ 822 (998)
|||||+|++|.+++.. +..++.||+.||.|||++||+||||||+|||++. .+||+|||+|+.......
T Consensus 417 VmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 417 MMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999999999865 5688999999999999999999999999999998 999999999966431100
Q ss_pred CCCCcchhhhhcccCCCCcccccccccccccccCCCCcccchhhcC--CCCCChhHHHHHHHHHHHHHcCCCCCC
Q 001902 823 LLLPTTNEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAG--AGHTSAVDWWALGILLYEMLYGYTPFR 895 (998)
Q Consensus 823 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~--~~~~~~sDIwSlG~il~eLltG~~Pf~ 895 (998)
. ...........+||+.|||||++.. ..|+..+|+||.++-..+.+.++.+|.
T Consensus 485 --------~------------~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 485 --------K------------AVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp --------H------------HHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred --------c------------ccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 0 0000011235689999999999977 567778999999999988887777664
No 254
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.87 E-value=1.4e-22 Score=222.28 Aligned_cols=134 Identities=17% Similarity=0.104 Sum_probs=109.3
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccCh---------------hHHHHHHHHHHHHHhCCCCCccce
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNR---------------NKVHRACAEREILDMLDHPFVPAL 730 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~---------------~~~~~~~~E~~il~~l~h~nIv~l 730 (998)
.|.+.+.||+|+||.||+|.+ .+|+.||+|+++....... .....+.+|+.+++.++ | +.+
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCc
Confidence 455669999999999999999 8899999999975322111 23566889999999999 4 566
Q ss_pred eEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCCcEEEEe
Q 001902 731 YASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNGHVSLTD 810 (998)
Q Consensus 731 ~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g~vkL~D 810 (998)
++++.. +..|+|||||+|++|.+ +.. .....++.||+.||.|||++||+||||||+|||++ +|.+||+|
T Consensus 167 ~~~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 167 PKVYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp CCEEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECC
T ss_pred CeEEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 665544 45699999999999988 422 12457899999999999999999999999999999 99999999
Q ss_pred ccCc
Q 001902 811 FDLS 814 (998)
Q Consensus 811 FG~a 814 (998)
||+|
T Consensus 236 FG~a 239 (282)
T 1zar_A 236 FPQS 239 (282)
T ss_dssp CTTC
T ss_pred CCCC
Confidence 9998
No 255
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.78 E-value=3.6e-19 Score=202.11 Aligned_cols=103 Identities=12% Similarity=0.005 Sum_probs=94.4
Q ss_pred CceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEEE
Q 001902 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKFW 561 (998)
Q Consensus 482 ~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~w 561 (998)
.+.++..|.+|. |+|||++++.++||+++|++|+++..++||++.......++..+..|.....++++++|||+.+|
T Consensus 251 ~~f~~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vW 327 (361)
T 4f3l_A 251 EEFTSRHSLEWK---FLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIW 327 (361)
T ss_dssp CEEEEEECTTSB---EEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEE
T ss_pred ceeEEEEcCCce---EEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEE
Confidence 467888899777 99999999999999999999999999999999888888899999888888889999999999999
Q ss_pred EEEEEeeeccC--C---EEEEEEecCCcccc
Q 001902 562 NLFHLQPMRDQ--K---YFIGVQLDGSEHLE 587 (998)
Q Consensus 562 v~~~~spi~d~--~---~~vgi~rDITerk~ 587 (998)
++.+..|+++. + +++|+.+|||+++.
T Consensus 328 v~~~~~~v~~~~~g~~~~iv~~~~dITe~~~ 358 (361)
T 4f3l_A 328 LQTHYYITYHQWNSRPEFIVCTHTVVSYAEV 358 (361)
T ss_dssp EEEEEEEEECTTTCCEEEEEEEEEECCHHHH
T ss_pred EEEEEEEEEcCCCCCeeEEEEEEEECChhHh
Confidence 99999999986 3 89999999999974
No 256
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.77 E-value=4.7e-19 Score=202.76 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=90.3
Q ss_pred hcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEEEecCCc
Q 001902 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLINYTKSGK 558 (998)
Q Consensus 480 ~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~-~~~e~~~~rkdG~ 558 (998)
+..+.++..|.+|+ |+|||++++.++||+++|++|+++..++||++.......+...+..+.. ...++++++|||+
T Consensus 276 ~~~~fi~~~~~dg~---~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~ 352 (387)
T 4f3l_B 276 KSMEYVSRHAIDGK---FVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGS 352 (387)
T ss_dssp CCCEEEEEECTTSB---EEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSC
T ss_pred CCceEEEEECCCCE---EEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCC
Confidence 45678889999777 9999999999999999999999999999999988888888888866554 5679999999999
Q ss_pred EEEEEEEEeeeccCC-----EEEEEEecCCcccc
Q 001902 559 KFWNLFHLQPMRDQK-----YFIGVQLDGSEHLE 587 (998)
Q Consensus 559 ~~wv~~~~spi~d~~-----~~vgi~rDITerk~ 587 (998)
++|++.+..++++.. +++|+.+|||+||+
T Consensus 353 ~vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 353 FITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 999999999999872 89999999999984
No 257
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.77 E-value=3.8e-18 Score=160.66 Aligned_cols=119 Identities=26% Similarity=0.460 Sum_probs=109.8
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
+++++|+.++++++++|+++|. +|+|+|+|++|++++||+.+|++|+++..+.++.........++..+..+..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (120)
T 2gj3_A 2 LLPEIFRQTVEHAPIAISITDL---KANILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSG 78 (120)
T ss_dssp CCHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hhHHHHHHHHHhCCCeEEEECC---CCCEEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEE
Confidence 4567899999999999999999 7789999999999999999999999988888777776677788888999999999
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhh
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk 307 (998)
+++.+++||+.+|+.++++|++|.+|.+.+++++++|||++|
T Consensus 79 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 79 VLVNRRKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred EEEEEcCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 999999999999999999999999999999999999999986
No 258
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.75 E-value=1.1e-18 Score=188.79 Aligned_cols=139 Identities=18% Similarity=0.114 Sum_probs=108.4
Q ss_pred cccccccCCCCceeEEEEEEccCCeE--EEEEEeecccccC---------------------hhHHHHHHHHHHHHHhCC
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQY--FAMKAMDKGVMLN---------------------RNKVHRACAEREILDMLD 723 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~--valK~i~~~~~~~---------------------~~~~~~~~~E~~il~~l~ 723 (998)
|.+.+.||+|+||.||+|.+..+|+. ||||+++.....- ......+.+|+.+|..+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999788999 9999976532110 011235778999999998
Q ss_pred CCCc--cceeEEEeeCCeEEEEEecCCC-C----chhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCC
Q 001902 724 HPFV--PALYASFQTKTHVCLITDYCPG-G----ELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKP 795 (998)
Q Consensus 724 h~nI--v~l~~~~~~~~~~~lV~E~~~g-g----sL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~~IiHrDLkP 795 (998)
|++| +.++.+ +..+|||||+.+ | +|.++... .++..+..++.||+.+|.||| ++||+||||||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 8764 444432 346899999942 3 67666432 235567889999999999999 99999999999
Q ss_pred CcEEEecCCcEEEEeccCccc
Q 001902 796 ENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 796 ~NILi~~~g~vkL~DFG~a~~ 816 (998)
+|||++. .++|+|||+|..
T Consensus 200 ~NILl~~--~~~liDFG~a~~ 218 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVT 218 (258)
T ss_dssp TSEEESS--SEEECCCTTCEE
T ss_pred HHEEEcC--cEEEEECccccc
Confidence 9999997 999999999854
No 259
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.75 E-value=1e-17 Score=160.60 Aligned_cols=126 Identities=45% Similarity=0.804 Sum_probs=104.9
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~r 554 (998)
+.++++++++|+++|.+|.+++|+|||++|++++||+.+|++|+++..+.+++........++..+..+..+..+.++++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999997733459999999999999999999999988888888777777888888888888999999999
Q ss_pred cCCcEEEEEEEEeeeccCC--EEEEEEecCCccccccccCcchhhhhHHHHHHH
Q 001902 555 KSGKKFWNLFHLQPMRDQK--YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVK 606 (998)
Q Consensus 555 kdG~~~wv~~~~spi~d~~--~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k 606 (998)
|||+.+|++++++|+.+++ +++++++|||+||+ .++.+++.++.++
T Consensus 82 kdG~~~~~~~~~~~~~~~~~~~~~~~~~DITe~k~------~e~~l~~~~~~l~ 129 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIEDKTYFVGIQNDITKQKE------YEKLLEDSLTEIT 129 (132)
T ss_dssp TTSCEEEEEEEEEEEEETTEEEEEEEEEECHHHHH------HHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCCeeEEEEEEEeCcHHHH------HHHHHHHHHHHHH
Confidence 9999999999999999887 89999999999996 3444444444433
No 260
>2pr5_A Blue-light photoreceptor; light-oxygen-voltage, LOV, PER-ARNT-SIM, PAS, flavoprotein, protein; HET: FMN; 1.45A {Bacillus subtilis} PDB: 2pr6_A*
Probab=99.74 E-value=7.8e-18 Score=161.42 Aligned_cols=122 Identities=41% Similarity=0.722 Sum_probs=106.1
Q ss_pred HHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001902 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (998)
Q Consensus 192 ~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (998)
+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.++
T Consensus 2 ~~~~~~~~~~i~~~d~~g~~~~i~~~N~a~~~~~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~ 81 (132)
T 2pr5_A 2 SHMLDHVRVGVVITDPALEDNPIVYVNQGFVQMTGYETEEILGKNCRFLQGKHTDPAEVDNIRTALQNKEPVTVQIQNYK 81 (132)
T ss_dssp ----CCCCCEEEEECTTSTTCCEEEECHHHHHHHSCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEEC
T ss_pred hhHHhcCCCcEEEEeCCCCCCcEEEECHHHHHHhCcCHHHHcCCChhhhCCCCCCHHHHHHHHHHHHcCCCeEEEEEEEe
Confidence 35789999999999985545589999999999999999999999988887777777777788888888889999999999
Q ss_pred cCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 272 kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
|||+.+|+.++++|+.+.+ +.+++++++|||++|++|++++.
T Consensus 82 kdG~~~~~~~~~~~~~~~~--~~~~~~~~~DITe~k~~e~~l~~ 123 (132)
T 2pr5_A 82 KDGTMFWNELNIDPMEIED--KTYFVGIQNDITKQKEYEKLLED 123 (132)
T ss_dssp TTSCEEEEEEEEEEEEETT--EEEEEEEEEECHHHHHHHHHHHH
T ss_pred cCCCeeeeEEEEEeccCCC--eeEEEEEEEeCcHHHHHHHHHHH
Confidence 9999999999999998765 88999999999999999998764
No 261
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.73 E-value=3.6e-17 Score=151.70 Aligned_cols=109 Identities=60% Similarity=1.125 Sum_probs=101.1
Q ss_pred hcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCE
Q 001902 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (998)
Q Consensus 197 ~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~ 276 (998)
+++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.++.........++.++..++.+.++++.++|||+.
T Consensus 1 ~~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~ 80 (109)
T 1n9l_A 1 GLRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTP 80 (109)
T ss_dssp CCSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCE
T ss_pred CCccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCE
Confidence 36789999997656889999999999999999999999998888888777777889999999999999999999999999
Q ss_pred EEEEeeeeEEeCCCCCEEEEEEEEecchh
Q 001902 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (998)
Q Consensus 277 ~w~~~~~spi~d~~G~v~~~v~i~~DITe 305 (998)
+|+.++++|++|++|.+.+++++.+|||+
T Consensus 81 ~~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 81 FWNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 99999999999999999999999999995
No 262
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.73 E-value=3.3e-17 Score=164.94 Aligned_cols=142 Identities=27% Similarity=0.463 Sum_probs=125.4
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
+..+.|+.++++++++|+++|....+|+|+|+|++|++++||+.++++|+++..+.+++........+...+..+..+..
T Consensus 4 ~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (176)
T 4hia_A 4 KQFEKIRAVFDRSGVALTLVDMSLPEQPVVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQV 83 (176)
T ss_dssp HHHHHHHHHHHHCSSCCEEEETTSTTCCEEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEecCCCCCcEEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEE
Confidence 34578899999999999999984222889999999999999999999999998888888888888889999999999999
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCCCchhhhhHHHHHHHHhH
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNGLPESLIRYDARQKEMAT 336 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~L~~~l~~~d~~~~~~~~ 336 (998)
+++.+++||+.+|+.++++|+.+.+|.+.+++++++|||++|++|+++ .++.+|.++...++
T Consensus 84 e~~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e~~~---------~~a~~d~LtgL~NR 145 (176)
T 4hia_A 84 VLRNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSEEAA---------AAGHAGALTGELAR 145 (176)
T ss_dssp EEEEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGHHHH---------HHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHHHHH---------HHhhhhHHhhhhhh
Confidence 999999999999999999999999999999999999999999999882 25667777666654
No 263
>2gj3_A Nitrogen fixation regulatory protein; PAS domain, FAD, redox sensor, atomic resolution, transferase; HET: FAD; 1.04A {Azotobacter vinelandii}
Probab=99.73 E-value=3.1e-17 Score=154.36 Aligned_cols=110 Identities=24% Similarity=0.392 Sum_probs=101.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++|+++|.+|+ |+|+|++|++++||+.+|++|++...+.+++........++..+..+..+..+++.+
T Consensus 7 ~~~~~~~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~elig~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 83 (120)
T 2gj3_A 7 FRQTVEHAPIAISITDLKAN---ILYANRAFRTITGYGSEEVLGKNESILSNGTTPRLVYQALWGRLAQKKPWSGVLVNR 83 (120)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHCCCTTGGGGCBGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHHhCCCeEEEECCCCC---EEeehHHHHHHHCcCHHHHcCCCHHHcCCCCCCHHHHHHHHHHHHcCCCEEEEEEEE
Confidence 78899999999999999888 999999999999999999999998888888777777778888888888999999999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHL 586 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk 586 (998)
++||+.+|++++++|+++.+ +++++++|||++|
T Consensus 84 ~~dG~~~~~~~~~~pi~~~~g~~~~~v~~~~DITe~k 120 (120)
T 2gj3_A 84 RKDKTLYLAELTVAPVLNEAGETIYYLGMHRDTSELH 120 (120)
T ss_dssp CTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCSCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEeccCcccC
Confidence 99999999999999999765 7999999999986
No 264
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.71 E-value=9.7e-17 Score=159.01 Aligned_cols=140 Identities=40% Similarity=0.721 Sum_probs=119.1
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHH
Q 001902 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (998)
Q Consensus 175 t~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~ 254 (998)
.++++.++++......|+.++++++++|+++|....+|+|+++|++|++++||+.++++|+++..+.+++........+.
T Consensus 21 ~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~ 100 (166)
T 3ue6_A 21 DNPSKANRILEDPDYSLVKALQMAQQNFVITDASLPDNPIVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIR 100 (166)
T ss_dssp ----------CCCCCHHHHHHHHTTSCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCcEEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHH
Confidence 35566778888899999999999999999999733347799999999999999999999999988888888888888888
Q ss_pred HHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhh
Q 001902 255 ETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (998)
Q Consensus 255 ~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~ 314 (998)
..+..+..+..++..++++|..+|+.+++.|+.+.+|.+.+++++++|||++|+++...+
T Consensus 101 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~~~~~e 160 (166)
T 3ue6_A 101 NAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYAKLLVNE 160 (166)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHHHHHHHH
T ss_pred HHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999876643
No 265
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=99.70 E-value=1.3e-16 Score=177.88 Aligned_cols=103 Identities=8% Similarity=0.001 Sum_probs=91.7
Q ss_pred CceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-----EEEEEEEEecC
Q 001902 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-----VTVQLINYTKS 556 (998)
Q Consensus 482 ~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~-----~~~e~~~~rkd 556 (998)
.+.++..|.+|+ |+|+|+++..++||+++||+|+++..++||++.....+.++..+..|.. ...++++++||
T Consensus 154 ~~fi~r~~~dG~---~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTATGI---ISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEETTCB---EEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECCCCe---EEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 468888999777 9999999999999999999999999999999998888888888887764 35789999999
Q ss_pred CcEEEEEEEEeeeccCC-----EEEEEEecCCcccc
Q 001902 557 GKKFWNLFHLQPMRDQK-----YFIGVQLDGSEHLE 587 (998)
Q Consensus 557 G~~~wv~~~~spi~d~~-----~~vgi~rDITerk~ 587 (998)
|+.+|++.+.++++|.. .++|+.+.|+....
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~~ 266 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPKQ 266 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCSS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCCC
Confidence 99999999999999764 78999998888764
No 266
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.69 E-value=1.9e-16 Score=170.64 Aligned_cols=136 Identities=38% Similarity=0.609 Sum_probs=111.0
Q ss_pred ccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHH
Q 001902 174 MSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKI 253 (998)
Q Consensus 174 it~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i 253 (998)
+......++++++++++|+.++++++++|+++|..+.+|+|+|+|++|++++||+.+|++|+++..+.+++........+
T Consensus 48 ~~~~~~~~~~l~~~~~~~~~i~~~~~~~i~~~d~~~~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~ 127 (258)
T 3p7n_A 48 APGADDTRVEVQPPAQWVLDLIEASPIASVVSDPRLADNPLIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKI 127 (258)
T ss_dssp -------------CCHHHHHHHHTCSSEEEEECTTSTTCCEEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHH
T ss_pred CCcchhhHHHHHhHHHHHHHHHhcCCccEEEEcCCCCCCcEEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHH
Confidence 33444556778999999999999999999999985556779999999999999999999999999999988888888889
Q ss_pred HHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHH
Q 001902 254 RETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (998)
Q Consensus 254 ~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~ 309 (998)
...+..+..+..+++.+++||+.+|+.+++.|++|.+|.+.+++++++|||++|+.
T Consensus 128 ~~~l~~~~~~~~e~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~~ 183 (258)
T 3p7n_A 128 RQGVREHKPVLVEILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQPN 183 (258)
T ss_dssp HHHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC------
T ss_pred HHHHHcCCCeEEEEEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhhh
Confidence 99999999999999999999999999999999999999999999999999999543
No 267
>1n9l_A PHOT-LOV1, putative blue light receptor; phototropin, flavin, electron transport; HET: FMN; 1.90A {Chlamydomonas reinhardtii} SCOP: d.110.3.6 PDB: 1n9n_A* 1n9o_A*
Probab=99.68 E-value=3.5e-16 Score=144.92 Aligned_cols=104 Identities=45% Similarity=0.913 Sum_probs=93.7
Q ss_pred cCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001902 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (998)
Q Consensus 481 ~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~ 560 (998)
++++|+++|....+++|+|+|++|++++||+.+|++|+++..+.++.........+++.+..+..+..++++++|||+.+
T Consensus 2 ~~~~i~i~d~~~~~g~i~~~N~a~~~l~Gy~~~e~~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~kdG~~~ 81 (109)
T 1n9l_A 2 LRHTFVVADATLPDCPLVYASEGFYAMTGYGPDEVLGHNCRFLQGEGTDPKEVQKIRDAIKKGEACSVRLLNYRKDGTPF 81 (109)
T ss_dssp CSCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEEEEECTTSCEE
T ss_pred CccEEEEEcCCCCCCeEEEEchHHHHHHCcCHHHHcCCCchhcCCCCCCHHHHHHHHHHHHcCCcEEEEEEEEcCCCCEE
Confidence 57899999964223449999999999999999999999988888888888888899999999999999999999999999
Q ss_pred EEEEEEeeeccCC----EEEEEEecCCc
Q 001902 561 WNLFHLQPMRDQK----YFIGVQLDGSE 584 (998)
Q Consensus 561 wv~~~~spi~d~~----~~vgi~rDITe 584 (998)
|++++++|+++++ +++++++|||+
T Consensus 82 ~~~~~~~pi~d~~G~~~~~v~~~~DITe 109 (109)
T 1n9l_A 82 WNLLTVTPIKTPDGRVSKFVGVQVDVTS 109 (109)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEECCC
T ss_pred EEEEEEEEEECCCCCEEEEEEEEEeCCC
Confidence 9999999999875 79999999996
No 268
>3ewk_A Sensor protein; PAS domain, alpha/beta fold, kinase, phosphoprotein, transfe flavoprotein; HET: FAD; 2.34A {Methylococcus capsulatus}
Probab=99.68 E-value=1.4e-16 Score=168.51 Aligned_cols=155 Identities=23% Similarity=0.434 Sum_probs=130.2
Q ss_pred CCCCCCcceeEeccCCCCCCCCCCCcCCCCCCCcccccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCc
Q 001902 134 DTETGKPQAVVARTSGGDDPNGKPGTSRRNSNNSVRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYP 213 (998)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~ 213 (998)
.+..|...|+.....+..+..+. ..+.+...+|||++++++++| +.++.++++++++|+++|. +|+
T Consensus 67 ~~~dG~~~~~~~~~~p~~d~~g~-------~~~~~~~~~DIT~~k~~e~~l----~~~~~~~~~~~~~i~~~d~---~g~ 132 (227)
T 3ewk_A 67 RRKDGTRYWVDSTIVPLMDNAGK-------PRQYISIRRDITAQKEAEAQL----ARLKQAMDANSEMILLTDR---AGR 132 (227)
T ss_dssp ECSSSCEEEEEEEEEEEECSSSC-------EEEEEEEEEECTTTTHHHHHH----HHHHHHHHTCCSEEEEECT---TSC
T ss_pred EcCCCCEEeeeeEEEEEEcCCCC-------EEEEEEEEEehhhHHHHHHHH----HHHHHHHhcCcCeEEEEcC---CCc
Confidence 34566666665444333332221 123455669999999998877 4567789999999999998 788
Q ss_pred eEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCC------EEEEEeeeeEEe
Q 001902 214 IMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGT------PFWNLLTIAPIK 287 (998)
Q Consensus 214 I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~------~~w~~~~~spi~ 287 (998)
|+++|++|++++||+.+|++|+++..+.++.........++..+..+..+.++++.++|||. .+|++++++|++
T Consensus 133 i~~~N~~~~~~~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~k~G~~~~dg~~~~~~~~~~pi~ 212 (227)
T 3ewk_A 133 IIYANPALCRFSGMAEGELLGQSPSILDSPLADQETLAAMQEALQAGQPWSGRLLNRRRTGPAPHDAEDYWAEISTTPIH 212 (227)
T ss_dssp EEEECHHHHHHHTCCTHHHHSSCGGGGBCTTSCHHHHHHHHHHHHHTCCEECCEEEEEECCSSSSCEEEEEEEEEEEEEE
T ss_pred EEEEchHHHHHhCCCHHHHcCCChhhccCCCCCHHHHHHHHHHHHcCCceeEEEEEECCCCCcCcccceEEEEEEEEEEE
Confidence 99999999999999999999999999988888888999999999999999999999999997 899999999999
Q ss_pred CCCCCEEEEEEEEec
Q 001902 288 DDEGKVLKFIGMQVE 302 (998)
Q Consensus 288 d~~G~v~~~v~i~~D 302 (998)
|.+|.+.+++++++|
T Consensus 213 d~~g~~~~~v~i~~D 227 (227)
T 3ewk_A 213 TDGNGLVGYVQIQHD 227 (227)
T ss_dssp CSSSCEEEEEEEEEC
T ss_pred CCCCCEEEEEEEecC
Confidence 999999999999988
No 269
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.67 E-value=2.1e-16 Score=153.72 Aligned_cols=132 Identities=15% Similarity=0.193 Sum_probs=112.8
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCC--CCCcccCCCCChHHHHHHHHHHHc
Q 001902 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGR--NCRFLQGAGTDPEDVAKIRETLQN 259 (998)
Q Consensus 182 ~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~--~~~~l~~~~~~~~~~~~i~~~l~~ 259 (998)
.+|++++++|+.+++.++++++.+|. ++.++++|+++++++||+.+++.+. .+..+++|++.......+..++..
T Consensus 2 ~aL~~se~rl~~~~~~~~~g~w~~d~---~~~~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~ 78 (142)
T 3mr0_A 2 NALSASEERFQLAVSGASAGLWDWNP---KTGAMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEH 78 (142)
T ss_dssp -------CCHHHHHHHTTCEEEEECT---TTCCEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCcEEEEEEc---CCCeEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhC
Confidence 46888999999999999999999999 6669999999999999999998773 345678888888888888888988
Q ss_pred CCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcC
Q 001902 260 GQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLR 316 (998)
Q Consensus 260 g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~ 316 (998)
+..+..+++++++||..+|+.....|++|.+|.+.+++|+++|||++|++|++|+.+
T Consensus 79 ~~~~~~e~r~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~~E~~L~~~ 135 (142)
T 3mr0_A 79 RDTYDVEYRVRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKRDEDALRVS 135 (142)
T ss_dssp CCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred CCceEEEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999999997653
No 270
>4hia_A LOV protein; PAS, HTH, signaling protein; HET: FMN; 1.95A {Rhodobacter sphaeroides} PDB: 4hnb_A* 4hj4_A* 4hj6_A* 4hj3_A*
Probab=99.65 E-value=1.4e-15 Score=152.91 Aligned_cols=113 Identities=29% Similarity=0.536 Sum_probs=105.1
Q ss_pred HHHHHhhcCceEEEEcCC---CCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDPR---LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~---G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
|+.++++++++|+++|.+ |+ |+++|++|++++||+.+|++|+++..+.+++........+...+..+..+..++
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~~~G~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 85 (176)
T 4hia_A 9 IRAVFDRSGVALTLVDMSLPEQP---VVLANPPFLRMTGYTEGQILGFNCRFLQRGDENAQARADIRDALKLGRELQVVL 85 (176)
T ss_dssp HHHHHHHCSSCCEEEETTSTTCC---EEEECHHHHHHHTCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEecCCCCCc---EEEECHHHHHHHCcCHHHHcCCCcceeeCCCCCHHHHHHHHHHHHcCCceEEEE
Confidence 788999999999999997 77 999999999999999999999999889999888888888999999999999999
Q ss_pred EEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccccc
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPL 589 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~ 589 (998)
..+++||+.+|+.++++|+.+.+ +++++++|||++|+.+
T Consensus 86 ~~~~~dG~~~~~~~~~~pi~~~~g~~~~~~~~~~DITe~k~~e 128 (176)
T 4hia_A 86 RNYRANDEPFDNLLFLHPVGGRPDAPDYFLGSQFELGRSGNSE 128 (176)
T ss_dssp EEECTTCCEEEEEEEEEEESSBTTBCSEEEEEEEEESSSGGGH
T ss_pred EEEcCCCCEEEEEEEEEEeeCCCCCeEEEEEEEEECcHhhHHH
Confidence 99999999999999999998754 8999999999999733
No 271
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.65 E-value=8.8e-16 Score=144.95 Aligned_cols=122 Identities=35% Similarity=0.679 Sum_probs=106.0
Q ss_pred HHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001902 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (998)
Q Consensus 194 ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (998)
++++++++|+++|..+.+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++..+++
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 81 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNPIVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINYKKS 81 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCcccEEEecCCCCCCcEEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEEcCC
Confidence 46789999999997443567999999999999999999999999888888888888888889999999999999999999
Q ss_pred CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 274 G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
|..+|+.+++.|+.+.+|.+.+++++++|||++|++|++...
T Consensus 82 g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~e~~~~~ 123 (128)
T 3t50_A 82 GEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVPRGSLEH 123 (128)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-------
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhhhhhhhh
Confidence 999999999999999999999999999999999999988543
No 272
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.65 E-value=7.8e-16 Score=146.95 Aligned_cols=122 Identities=16% Similarity=0.197 Sum_probs=97.9
Q ss_pred hhhHHHHHhhhccc-cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHH
Q 001902 459 VDDKVRQKEMRKGI-DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (998)
Q Consensus 459 ~er~~~e~e~r~~~-~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~ 537 (998)
+++++.|++++... .|+.++++++++|+++|.+|+ |+++|++|++||||+++|++|+++..+.+++........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~~g~---i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSATDGT---IVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECCCCe---EEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 35566666665533 489999999999999999887 99999999999999999999999888887765544444444
Q ss_pred HHHhcCCc----EEEEEEEEecCCcEEEEEEEEeeeccCC--EEEEEEecCC
Q 001902 538 AAIDNQTD----VTVQLINYTKSGKKFWNLFHLQPMRDQK--YFIGVQLDGS 583 (998)
Q Consensus 538 ~~l~~g~~----~~~e~~~~rkdG~~~wv~~~~spi~d~~--~~vgi~rDIT 583 (998)
.....+.. ...+...++|||+.+|++++++|+.+++ +++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSGGERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEECCeEEEEEEEEECc
Confidence 44444432 2457788999999999999999998766 8999999998
No 273
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.65 E-value=2.9e-16 Score=147.69 Aligned_cols=116 Identities=9% Similarity=0.109 Sum_probs=99.5
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHH-cCCcEEEEEE
Q 001902 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ-NGQSYCGRLL 268 (998)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~-~g~~~~~e~~ 268 (998)
.+..+++++++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..+++
T Consensus 3 ~~~ll~e~~~d~i~~~d~---~g~i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r 79 (121)
T 3f1p_B 3 FKGLNVCQPTRFISRHNI---EGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFR 79 (121)
T ss_dssp -----CCCCCEEEEEECT---TSBEEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEE
T ss_pred cccceecCCCceEEEECC---CceEEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEE
Confidence 345688999999999998 888999999999999999999999999889999887777777777774 4557889999
Q ss_pred EEecCCCEEEEEeeeeEEeCC-CCCEEEEEEEEecchhhhH
Q 001902 269 NYKKDGTPFWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 269 ~~~kdG~~~w~~~~~spi~d~-~G~v~~~v~i~~DITerk~ 308 (998)
++++||+.+|++.+..|+.|. +|.+.+++++.+|||++|+
T Consensus 80 ~~~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 80 FRSKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp EECTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred EEecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 999999999999999999987 7889999999999999986
No 274
>3f1p_B ARYL hydrocarbon receptor nuclear translocator; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.0 PDB: 3f1o_B* 3f1n_B 3h7w_B* 3h82_B* 1x0o_A 2hv1_A 4h6j_B 2b02_A* 2k7s_A 2a24_B
Probab=99.65 E-value=5.4e-16 Score=145.80 Aligned_cols=110 Identities=12% Similarity=0.154 Sum_probs=96.7
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHh-cCCcEEEEEEEE
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAID-NQTDVTVQLINY 553 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~-~g~~~~~e~~~~ 553 (998)
..+++++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..+++|++.......+...+. .+..+..|++++
T Consensus 5 ~ll~e~~~d~i~~~d~~g~---i~~~n~~~~~~~G~~~~el~g~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 81 (121)
T 3f1p_B 5 GLNVCQPTRFISRHNIEGI---FTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKGQVLSVMFRFR 81 (121)
T ss_dssp ---CCCCCEEEEEECTTSB---EEEECTTHHHHHSCCGGGTTTSBGGGGBCTTTHHHHHHHHHHHTTSTTCCEEEEEEEE
T ss_pred cceecCCCceEEEECCCce---EEEECcchhhhhCCChHHHcCCCHHHeECHHHHHHHHHHHHHHHhcCCCcccEEEEEE
Confidence 4578999999999999888 999999999999999999999999899999998888888888874 555789999999
Q ss_pred ecCCcEEEEEEEEeeeccC-C----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQ-K----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~-~----~~vgi~rDITerk~ 587 (998)
++||+.+|++++..|+.+. + +++|+.+|||++|+
T Consensus 82 ~~dG~~~w~~~~~~~~~~~~~g~~~~iv~~~~DIT~~kq 120 (121)
T 3f1p_B 82 SKNQEWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQ 120 (121)
T ss_dssp CTTSCEEEEEEEEEEECCTTCCCCCEEEEEEEECCCC--
T ss_pred ecCCCEEEEEEEEEEEECCCCCceeEEEEEeEEcccccC
Confidence 9999999999999999876 2 89999999999986
No 275
>1d06_A Nitrogen fixation regulatory protein FIXL; oxygen sensor, histidine kinase, PAS, high-resolution, two-C system, signaling protein; HET: HEM; 1.40A {Sinorhizobium meliloti} SCOP: d.110.3.2 PDB: 1ew0_A*
Probab=99.63 E-value=5.5e-16 Score=148.02 Aligned_cols=125 Identities=22% Similarity=0.264 Sum_probs=102.0
Q ss_pred cccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHH
Q 001902 175 SDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIR 254 (998)
Q Consensus 175 t~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~ 254 (998)
|.++++|++|++++..|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..++++.........+.
T Consensus 2 ~~~~~~e~~l~~~~~~~~~l~~~~~d~i~~~d~---~g~i~~~N~a~~~l~Gy~~~eliG~~~~~l~~~~~~~~~~~~~~ 78 (130)
T 1d06_A 2 SHMLETEDVVRARDAHLRSILDTVPDATVVSAT---DGTIVSFNAAAVRQFGYAEEEVIGQNLRILMPEPYRHEHDGYLQ 78 (130)
T ss_dssp CHHHHHHHHHHHHTSCHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCcCeEEEECC---CCeEEEEcHHHHHHHCCCHHHHcCCcHHHHCCchhHHHHHHHHH
Confidence 567788999999999999999999999999999 77899999999999999999999999888877654443334444
Q ss_pred HHHHcCCc----EEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 255 ETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 255 ~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
.....+.. ...++..++|||+.+|++++++|+.+. ...+++++++|||
T Consensus 79 ~~~~~~~~~~~~~~~e~~~~~kdG~~~~~~~~~~~~~~~--~~~~~~~~~~DIT 130 (130)
T 1d06_A 79 RYMATGEKRIIGIDRVVSGQRKDGSTFPMKLAVGEMRSG--GERFFTGFIRDLT 130 (130)
T ss_dssp HHHHHCCCSSTTSCEEEEEECTTSCEEEEEEEEEEEEET--TEEEEEEEEEECC
T ss_pred HHHhcCCccccCCeeEEEEEeCCCCEEEEEEEEEEEEEC--CeEEEEEEEEECc
Confidence 44444432 234677789999999999999999763 3456899999997
No 276
>3p7n_A Sensor histidine kinase; LOV domain, light-activated transcription factor, DNA bindin; HET: FMN; 2.10A {Erythrobacter litoralis}
Probab=99.62 E-value=3.2e-15 Score=161.08 Aligned_cols=112 Identities=36% Similarity=0.636 Sum_probs=100.9
Q ss_pred cHHHHHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEE
Q 001902 473 DLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ 549 (998)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e 549 (998)
.|+.++++++++|+++|. +|+ |++||++|++++||+++|++|+++..+.+++........+...+..+..+..+
T Consensus 64 ~~~~i~~~~~~~i~~~d~~~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~e 140 (258)
T 3p7n_A 64 WVLDLIEASPIASVVSDPRLADNP---LIAINQAFTDLTGYSEEECVGRNCRFLAGSGTEPWLTDKIRQGVREHKPVLVE 140 (258)
T ss_dssp HHHHHHHTCSSEEEEECTTSTTCC---EEEECHHHHHHHCCCGGGTTTSCGGGGCCTTCCHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCccEEEEcCCCCCCc---EEEEhHHHHHHcCCCHHHHCCCChhhccCCCCchhHHHHHHHHHHcCCCeEEE
Confidence 389999999999999999 666 99999999999999999999999999999999998888999999999999999
Q ss_pred EEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 550 LINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 550 ~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
++.+++||+.+|+.++++|+.+.+ +++++++|||++|+
T Consensus 141 ~~~~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITerk~ 182 (258)
T 3p7n_A 141 ILNYKKDGTPFRNAVLVAPIYDDDDELLYFLGSQVEVDDDQP 182 (258)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCSEEEEEEEEEC-----
T ss_pred EEEEcCCCCEEEEeeEEEEEEcCCCCEEEEEEEeeecchhhh
Confidence 999999999999999999999765 89999999999964
No 277
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.62 E-value=5.3e-16 Score=174.82 Aligned_cols=139 Identities=14% Similarity=0.132 Sum_probs=101.4
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccC------------h---hHH----HHHHHHHHHHHhCCCCCc
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLN------------R---NKV----HRACAEREILDMLDHPFV 727 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~------------~---~~~----~~~~~E~~il~~l~h~nI 727 (998)
|.+.+.||.|+||.||+|.+ .+|+.||||+++.....- . ... .....|...|.++.+.++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 89999999999999999998 569999999986432110 0 000 012346677777755544
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEecCC---
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQGNG--- 804 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~~g--- 804 (998)
....-+.... .+|||||++|++|..+... .....++.||+.+|.+||++|||||||||.|||++.+|
T Consensus 176 ~vp~p~~~~~--~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~ 245 (397)
T 4gyi_A 176 PVPEPIAQSR--HTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAE 245 (397)
T ss_dssp SCCCEEEEET--TEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSS
T ss_pred CCCeeeeccC--ceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcc
Confidence 3222222222 2699999999998765421 23466789999999999999999999999999999876
Q ss_pred -------cEEEEeccCccc
Q 001902 805 -------HVSLTDFDLSCL 816 (998)
Q Consensus 805 -------~vkL~DFG~a~~ 816 (998)
.+.|+||+-+..
T Consensus 246 d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 246 DPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CTTSEEEEEEECCCTTCEE
T ss_pred cccccccceEEEEeCCccc
Confidence 389999998743
No 278
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.62 E-value=5.2e-15 Score=145.94 Aligned_cols=131 Identities=31% Similarity=0.563 Sum_probs=119.3
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCC---ceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDY---PIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS 262 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG---~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~ 262 (998)
.++++++.+++.++++|+++|. +| +|+++|++|++++||+.++++|+++..+.++.........+...+..+..
T Consensus 22 ~~~~~~~~i~~~~~~~i~~~d~---~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (162)
T 3sw1_A 22 INAQLLQSMVDASNDGIVVAEK---EGDDTILIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRP 98 (162)
T ss_dssp CCHHHHHHHHHTCSSEEEEEEE---ETTEEEEEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCC
T ss_pred chHHHHHHHHhhccCcEEEEeC---CCCccEEEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCC
Confidence 5568899999999999999999 66 79999999999999999999999998888887777778888889999999
Q ss_pred EEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCCCC
Q 001902 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRPNG 319 (998)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~~~ 319 (998)
+..++...+++|..+|+.+++.|+.+.+|.+.+++++++|||++++++++++.....
T Consensus 99 ~~~~~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~~e~~l~~~~~~ 155 (162)
T 3sw1_A 99 CREVLRNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVELERELAELRAR 155 (162)
T ss_dssp EEEEEEEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHHHHHHHHHHTC-
T ss_pred CcceEEEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998765444
No 279
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.62 E-value=5.5e-15 Score=138.60 Aligned_cols=105 Identities=15% Similarity=0.144 Sum_probs=86.6
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.+|++++++|+++|.+|+ |++||++|++++||+++|++|+++..+.++.... ........+..+..+..|.+++
T Consensus 13 ~~~l~e~~~d~i~~~d~~g~---i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~~~~ 88 (117)
T 2r78_A 13 YRALFEHAIDGIFIMDAEGH---YLDVNPAICSAIGYTRDEFLALDWGVLSRGVDSG-WAAASLARIVGGEPLREERTVW 88 (117)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTTS-HHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCC---EEEecHHHHHHHCcCHHHHcCCCHHHhCCccchh-HHHHHHHHHHcCCcEEEEEEEE
Confidence 78999999999999999887 9999999999999999999999877665444322 2334455666777788999999
Q ss_pred ecCCcEEEEEEEEeeeccCCEEEEEEecCC
Q 001902 554 TKSGKKFWNLFHLQPMRDQKYFIGVQLDGS 583 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~~~vgi~rDIT 583 (998)
+|||+.+|++++++|+.+. .++++++|||
T Consensus 89 ~kdG~~~~v~~~~~~~~~g-~~~~i~~DIT 117 (117)
T 2r78_A 89 TRNGDQLTVELSAHLLPDG-KILGIARDVS 117 (117)
T ss_dssp CTTSCEEEEEEEEEECTTS-CEEEEEEC--
T ss_pred ecCCCEEEEEEEEEEecCC-eEEEEEEeCC
Confidence 9999999999999999743 4889999998
No 280
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.62 E-value=1.3e-15 Score=142.93 Aligned_cols=111 Identities=14% Similarity=0.145 Sum_probs=91.6
Q ss_pred cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCC-HHHHHHHHHHHhcCCcEEEEEE
Q 001902 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETD-PATVRKIRAAIDNQTDVTVQLI 551 (998)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~-~~~~~~i~~~l~~g~~~~~e~~ 551 (998)
+|+.+|++++++|++ |.+|+ |++||++|++|+||+++|++|+++..+.+++.. ......+...+..+..+..|..
T Consensus 4 ~~~~~~~~~~~~i~~-~~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLVL-SRDRV---IEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEEE-EETTE---EEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEEE-ecCCE---EHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 489999999999975 66677 999999999999999999999998777665432 3445556667777788999999
Q ss_pred EEecCCcEEEEEEEEeeeccCC---EEEEEEecCCcccc
Q 001902 552 NYTKSGKKFWNLFHLQPMRDQK---YFIGVQLDGSEHLE 587 (998)
Q Consensus 552 ~~rkdG~~~wv~~~~spi~d~~---~~vgi~rDITerk~ 587 (998)
.+++||+.+|+.++..|+.+++ +++++++|||+||+
T Consensus 80 ~~~~dG~~~~~~~~~~~~~~~~~~~~~v~~~~DITerk~ 118 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRALDRTAPLAAGVWTFEDLSATRR 118 (120)
T ss_dssp EECTTSCEEEEEEEEEESSTTSTTSSEEEEEEESCC---
T ss_pred EEeCCCCEEEEEEEEEECCCCCCceeEEEEEEcccHhhc
Confidence 9999999999999999995544 89999999999996
No 281
>2r78_A Sensor protein; sensory box sensor histidine kinase/response regulator, structural genomics, PSI, MCSG; 1.60A {Geobacter sulfurreducens pca}
Probab=99.62 E-value=4.8e-15 Score=138.99 Aligned_cols=114 Identities=16% Similarity=0.198 Sum_probs=93.8
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001902 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (998)
Q Consensus 182 ~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (998)
+.|++++++|+.++++++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++... .........+..+.
T Consensus 4 ~~l~~se~~~~~l~e~~~d~i~~~d~---~g~i~~vN~a~~~l~Gy~~~el~g~~~~~~~~~~~~-~~~~~~~~~~~~~~ 79 (117)
T 2r78_A 4 ENLYFQSNAYRALFEHAIDGIFIMDA---EGHYLDVNPAICSAIGYTRDEFLALDWGVLSRGVDS-GWAAASLARIVGGE 79 (117)
T ss_dssp CSHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBTTTTTTCSTT-SHHHHHHHHHHTTC
T ss_pred hHHHHhHHHHHHHHhcCCceEEEECC---CCCEEEecHHHHHHHCcCHHHHcCCCHHHhCCccch-hHHHHHHHHHHcCC
Confidence 45788999999999999999999998 788999999999999999999999987766544332 22334556677777
Q ss_pred cEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
.+..+.+.++|||+.+|+.++++|+. +|. ++++++|||
T Consensus 80 ~~~~e~~~~~kdG~~~~v~~~~~~~~--~g~---~~~i~~DIT 117 (117)
T 2r78_A 80 PLREERTVWTRNGDQLTVELSAHLLP--DGK---ILGIARDVS 117 (117)
T ss_dssp CEEEEEEEECTTSCEEEEEEEEEECT--TSC---EEEEEEC--
T ss_pred cEEEEEEEEecCCCEEEEEEEEEEec--CCe---EEEEEEeCC
Confidence 88889999999999999999999985 565 678899998
No 282
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.61 E-value=1.6e-15 Score=142.27 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=81.9
Q ss_pred hcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc----EEEEEEEEec
Q 001902 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTVQLINYTK 555 (998)
Q Consensus 480 ~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~----~~~e~~~~rk 555 (998)
+++++|+++|.+|+ |+++|++|++||||+++|++|+++..+.++.........+......+.. ...+...++|
T Consensus 1 ~~~d~i~~~d~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDGHGI---IQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECCCCe---EEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36899999999887 9999999999999999999999988887766544444444444444332 3457788999
Q ss_pred CCcEEEEEEEEeeeccCC--EEEEEEecCCcccc
Q 001902 556 SGKKFWNLFHLQPMRDQK--YFIGVQLDGSEHLE 587 (998)
Q Consensus 556 dG~~~wv~~~~spi~d~~--~~vgi~rDITerk~ 587 (998)
||+.+|++++++|+.+++ +++++++|||+||+
T Consensus 78 dG~~~~~~~~~~~~~~~~~~~~~~~~~DITerk~ 111 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSGGEPYFTGFVRDLTEHQQ 111 (119)
T ss_dssp TSCEEEEEEEEEEEEETTEEEEEEEEEECC----
T ss_pred CCCEEEEEEEEEEEEECCeEEEEEEEEEcHHHHH
Confidence 999999999999998766 89999999999997
No 283
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.61 E-value=1.4e-15 Score=141.83 Aligned_cols=105 Identities=16% Similarity=0.135 Sum_probs=96.8
Q ss_pred hcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcE
Q 001902 480 RIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKK 559 (998)
Q Consensus 480 ~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~ 559 (998)
++++.|+++|.+|+ |+|+|+++++++||+++|++|+++..+++|++.......+...+..+..+..+++++++||+.
T Consensus 7 ~~~~~i~~~d~~g~---i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 83 (117)
T 3f1p_A 7 DSKTFLSEHSMDMK---FTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGY 83 (117)
T ss_dssp GGGEEEEEECTTCB---EEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSE
T ss_pred CCccEEEEECCCce---EEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCE
Confidence 45789999999888 999999999999999999999999999999998888888888888888888899999999999
Q ss_pred EEEEEEEeeeccC-C----EEEEEEecCCcccc
Q 001902 560 FWNLFHLQPMRDQ-K----YFIGVQLDGSEHLE 587 (998)
Q Consensus 560 ~wv~~~~spi~d~-~----~~vgi~rDITerk~ 587 (998)
+|++++..|+.+. + +++++.+|||+||+
T Consensus 84 ~w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 84 VWLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 9999999999976 3 78999999999986
No 284
>3mqq_A Transcriptional regulator, LUXR family; PAS domain, PSI, MCSG, structural genomics, center for structural genomics; 1.65A {Burkholderia thailandensis} PDB: 3mqo_A
Probab=99.60 E-value=1.4e-15 Score=142.71 Aligned_cols=115 Identities=15% Similarity=0.153 Sum_probs=94.0
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCC-hHHHHHHHHHHHcCCcEEEEEE
Q 001902 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTD-PEDVAKIRETLQNGQSYCGRLL 268 (998)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~-~~~~~~i~~~l~~g~~~~~e~~ 268 (998)
.|+.+|++++++|++ |. +|+|+++|++|++++||+.+|++|+++..+++++.. ......+...+..+..+..+++
T Consensus 4 ~~~~~~~~~~~~i~~-~~---~g~i~~~N~a~~~l~G~~~~el~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~ 79 (120)
T 3mqq_A 4 DYKTAFHLAPIGLVL-SR---DRVIEDCNDELAAIFRCARADLIGRSFEVLYPSSDEFERIGERISPVMIAHGSYADDRI 79 (120)
T ss_dssp CHHHHHHHCSSEEEE-EE---TTEEEEECHHHHHHTTSCHHHHTTCBGGGGSSSHHHHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred hHHHHHhcCCceEEE-ec---CCEEHHHHHHHHHHhCcCHHHhCCCchhhccCChhhHHHHHHHHHHHHhcCCcceEEEE
Confidence 478899999999964 66 788999999999999999999999998877665332 3344556667777888999999
Q ss_pred EEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHH
Q 001902 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEG 309 (998)
Q Consensus 269 ~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~ 309 (998)
.+++||+.+|+.++..|+ +.+|...+++++++|||++|++
T Consensus 80 ~~~~dG~~~~~~~~~~~~-~~~~~~~~~v~~~~DITerk~~ 119 (120)
T 3mqq_A 80 MKRAGGELFWCHVTGRAL-DRTAPLAAGVWTFEDLSATRRV 119 (120)
T ss_dssp EECTTSCEEEEEEEEEES-STTSTTSSEEEEEEESCC----
T ss_pred EEeCCCCEEEEEEEEEEC-CCCCCceeEEEEEEcccHhhcc
Confidence 999999999999999998 5666677889999999999975
No 285
>3f1p_A Endothelial PAS domain-containing protein 1; PAS domain, heterodimer, internal cavity, activator, angiogenesis, congenital erythrocytosis; 1.17A {Homo sapiens} SCOP: d.110.3.7 PDB: 3f1o_A* 3f1n_A 3h7w_A* 3h82_A* 1p97_A 2a24_A 4h6j_A
Probab=99.60 E-value=1.1e-15 Score=142.62 Aligned_cols=108 Identities=15% Similarity=0.156 Sum_probs=98.7
Q ss_pred cCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 001902 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (998)
Q Consensus 198 ~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (998)
+++.|+++|. +|+|+|+|+++++++||+++|++|+++..+++|++.......+...+..+..+..+++++++||+.+
T Consensus 8 ~~~~i~~~d~---~g~i~~~n~~~~~~~Gy~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~~ 84 (117)
T 3f1p_A 8 SKTFLSEHSM---DMKFTYCDDRITELIGYHPEELLGRSAYEFYHALDSENMTKSHQNLCTKGQVVSGQYRMLAKHGGYV 84 (117)
T ss_dssp GGEEEEEECT---TCBEEEECTHHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHSEEECCCEEEECTTSSEE
T ss_pred CccEEEEECC---CceEEEECcChhhhhCCCHHHHcCCchhheECHHHHHHHHHHHHHHHhCCCeeeeEEEEEecCCCEE
Confidence 4678888888 7889999999999999999999999998899988887777888888888888888999999999999
Q ss_pred EEEeeeeEEeCC-CCCEEEEEEEEecchhhhH
Q 001902 278 WNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 278 w~~~~~spi~d~-~G~v~~~v~i~~DITerk~ 308 (998)
|+.++..|+.|+ +|.+.+++++.+|||++|+
T Consensus 85 w~~~~~~~~~d~~~g~~~~iv~~~~DITer~~ 116 (117)
T 3f1p_A 85 WLETQGTVIYNPRNLQPQCIMCVNYVLSEIEK 116 (117)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEEEECSCCBC
T ss_pred EEEEeeEEEECCCCCCceEEEEEeeecccccc
Confidence 999999999987 7889999999999999985
No 286
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.60 E-value=1.6e-14 Score=134.08 Aligned_cols=127 Identities=75% Similarity=1.225 Sum_probs=107.5
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
++++.++.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~i~~~d~~d~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (130)
T 2z6d_A 3 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCG 82 (130)
T ss_dssp ----CHHHHHHHTTCEEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEE
T ss_pred hHHHHHHHHHHhcccceeeeeccCCCCcEEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCccee
Confidence 45567899999999999999922227789999999999999999999999998888887777777888888899988888
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHH
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~ 312 (998)
++...+++|..+|+.+++.|+.+.+|.+.+++++++|||+++++|++
T Consensus 83 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~e~e 129 (130)
T 2z6d_A 83 RLLNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEGVND 129 (130)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC-----
T ss_pred EEEEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHhhcc
Confidence 99999999999999999999999999999999999999999988764
No 287
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.60 E-value=3.5e-15 Score=139.19 Aligned_cols=123 Identities=11% Similarity=0.015 Sum_probs=94.5
Q ss_pred cccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcC--CCCCcccCCCCChHHHHHHHHHHHcC
Q 001902 183 GLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVG--RNCRFLQGAGTDPEDVAKIRETLQNG 260 (998)
Q Consensus 183 ~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG--~~~~~l~~~~~~~~~~~~i~~~l~~g 260 (998)
+|++++++|+.+++.++++++++|. +|.++++|+++++++||+.++++| ..+..++++++.......+...+..+
T Consensus 1 al~~~~~~l~~~~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 77 (125)
T 3nja_A 1 SNAMAEKLLHTAESDAGIGSWVLHM---ESGRLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGD 77 (125)
T ss_dssp ----------------CCEEEEEET---TTTEEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSC
T ss_pred CcHHHHHHHHHHHHhCCeeEEEEEc---CCCcEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcC
Confidence 3667888999999999999999999 677999999999999999999999 44445677777777777888888888
Q ss_pred CcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhH
Q 001902 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~ 308 (998)
..+..+++.++++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 78 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 78 RPFDVEYRIVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp CCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred CCceEEEEEECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 889999999999999999999999999999999999999999999985
No 288
>3ue6_A Aureochrome1; PAS/LOV domain, FMN-binding blue-light photoreceptor, signal protein; HET: FMN; 2.75A {Vaucheria frigida} PDB: 3ulf_A*
Probab=99.59 E-value=4.5e-15 Score=146.87 Aligned_cols=123 Identities=48% Similarity=0.814 Sum_probs=105.6
Q ss_pred HHHHHhhhcc-ccHHHHHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHH
Q 001902 462 KVRQKEMRKG-IDLATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIR 537 (998)
Q Consensus 462 ~~~e~e~r~~-~~l~~i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~ 537 (998)
+..+++++.. ..|+.++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+.
T Consensus 24 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~G~~~~e~~g~~~~~l~~~~~~~~~~~~~~ 100 (166)
T 3ue6_A 24 SKANRILEDPDYSLVKALQMAQQNFVITDASLPDNP---IVYASRGFLTLTGYSLDQILGRNCRFLQGPETDPRAVDKIR 100 (166)
T ss_dssp -------CCCCCHHHHHHHHTTSCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCceEEEEEccCCCCc---EEEECHHHHHHhCcCHHHHcCCCHhheeCCCCCHHHHHHHH
Confidence 3334444332 3489999999999999999 688 99999999999999999999999888888888888888889
Q ss_pred HHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 538 AAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 538 ~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
..+..+..+..+....++||..+|+.++++|+.+.+ +++++++|||++|+
T Consensus 101 ~~~~~~~~~~~e~~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~ 154 (166)
T 3ue6_A 101 NAITKGVDTSVCLLNYRQDGTTFWNLFFVAGLRDSKGNIVNYVGVQSKVSEDYA 154 (166)
T ss_dssp HHHHHTCCEEEEEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEECCBCCHHHH
T ss_pred HHHhcCCceEEEEEEEcCCCCEEEEEEEEEeeeCCCCCEEEEEEEEEechHHHH
Confidence 999999999999999999999999999999998754 78999999999986
No 289
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.58 E-value=1.9e-14 Score=132.03 Aligned_cols=114 Identities=41% Similarity=0.829 Sum_probs=101.7
Q ss_pred HHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001902 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (998)
Q Consensus 194 ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (998)
++++++++++++|....+|+|+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+++.++++
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNPIIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINYTKS 81 (115)
T ss_dssp ---CCCCSEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred ccccCCCcEEEEcCCCCCCcEEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEecCC
Confidence 47889999999997333456999999999999999999999998888888888888888899999999999999999999
Q ss_pred CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhh
Q 001902 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 274 G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk 307 (998)
|..+|+.+++.|+.+.+|.+.+++++++|||+++
T Consensus 82 g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 82 GKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred CCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 9999999999999999999999999999999874
No 290
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.58 E-value=2e-14 Score=132.56 Aligned_cols=121 Identities=17% Similarity=0.291 Sum_probs=108.1
Q ss_pred cchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEE
Q 001902 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (998)
.++++.++.++++++++++++|. +|+|+++|+++++++||+.++++|+++..+.+++........+...+..+..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~i~~~d~---~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (124)
T 3lyx_A 3 VDILKQRAKAFDYVFDAIVVTDL---QGFIIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWT 79 (124)
T ss_dssp -CHHHHHHHGGGTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEE
T ss_pred hhHHHHHHHHHhhcCceEEEECC---CCcEeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCccc
Confidence 35668899999999999999998 777999999999999999999999998877777666666777888888999999
Q ss_pred EEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhH
Q 001902 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~ 308 (998)
.+....+++|..+|+.++..|+.+.+|.+.+++++++|||++|+
T Consensus 80 ~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 80 GEIRMLHKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred ceEEEEccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 99999999999999999999999999999999999999999986
No 291
>2vv6_A FIXL, sensor protein FIXL; signaling protein, transferase, phosphoprotein, nitrogen FIX PER-ARNT-SIM, metal-binding, PAS, iron, heme; HET: HEM; 1.5A {Bradyrhizobium japonicum} PDB: 1xj6_A* 1xj4_A* 2vv7_A* 2vv8_A* 1lsw_A* 1dp8_A* 1dp9_A* 1drm_A* 1lsv_A* 1dp6_A* 1lsx_A* 1lt0_A* 1y28_A* 2cmn_A* 1xj3_A* 1xj2_A* 2owh_A* 2owj_A*
Probab=99.58 E-value=6.7e-15 Score=137.92 Aligned_cols=113 Identities=18% Similarity=0.232 Sum_probs=80.5
Q ss_pred hcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc----EEEEEEEEec
Q 001902 197 TFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS----YCGRLLNYKK 272 (998)
Q Consensus 197 ~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~----~~~e~~~~~k 272 (998)
+++++|+++|. +|+|+++|++|++++||+.+|++|+++..+.++.........+......+.. ...++..++|
T Consensus 1 ~~~d~i~~~d~---~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (119)
T 2vv6_A 1 TIPDAMIVIDG---HGIIQLFSTAAERLFGWSELEAIGQNVNILMPEPDRSRHDSYISRYRTTSDPHIIGIGRIVTGKRR 77 (119)
T ss_dssp -CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGGSCTTHHHHHHHHHHHHHHHCCCSSTTTCEEEEEECT
T ss_pred CCcceEEEECC---CCeEEEEhHHHHHHhCCCHHHHcCCCHHHhCCchHHHHHHHHHHHHhcCCCcccCCCceEEEEEeC
Confidence 36899999999 7889999999999999999999999988777665443333334444444432 2346677899
Q ss_pred CCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhh
Q 001902 273 DGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (998)
Q Consensus 273 dG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~ 314 (998)
||+.+|++++++|+.+. ...+++++++|||++|++|++++
T Consensus 78 dG~~~~~~~~~~~~~~~--~~~~~~~~~~DITerk~~e~~l~ 117 (119)
T 2vv6_A 78 DGTTFPMHLSIGEMQSG--GEPYFTGFVRDLTEHQQTQARLQ 117 (119)
T ss_dssp TSCEEEEEEEEEEEEET--TEEEEEEEEEECC----------
T ss_pred CCCEEEEEEEEEEEEEC--CeEEEEEEEEEcHHHHHHHHHHH
Confidence 99999999999999764 34578999999999999998864
No 292
>4eet_B Phototropin-2; LOV, blue light photoreceptor, signaling protein, flavoprote; HET: FMN; 1.20A {Arabidopsis thaliana} PDB: 4ees_A* 4eer_A* 4eep_A* 4eeu_A* 1jnu_A* 1g28_A*
Probab=99.57 E-value=2.8e-14 Score=130.82 Aligned_cols=107 Identities=82% Similarity=1.237 Sum_probs=97.1
Q ss_pred HHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 477 i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++++++++|+++|. +|+ |+++|++|++++||+.+|++|+++..+.+++........+...+..+..+..+.+..
T Consensus 2 ~l~~~~~~i~~~d~~~~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (115)
T 4eet_B 2 SPEFIEKNFVITDPRLPDNP---IIFASDGFLELTEYSREEILGRNARFLQGPETDQATVQKIRDAIRDQRETTVQLINY 78 (115)
T ss_dssp ---CCCCSEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCCCcEEEEcCCCCCCc---EEEEcHHHHHHHCcCHHHHhCCCHHHhcCCCCChHHHHHHHHHHHcCCCcceEEEEe
Confidence 57899999999999 888 999999999999999999999998888888888888888899999999999999999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHL 586 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk 586 (998)
+++|+.+|+.++++|+.+.+ +++++++|||+|+
T Consensus 79 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DITer~ 115 (115)
T 4eet_B 79 TKSGKKFWNLLHLQPVRDQKGELQYFIGVQLDGSDHV 115 (115)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECSCCC
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEeecccC
Confidence 99999999999999998765 7899999999985
No 293
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.57 E-value=3.7e-15 Score=146.81 Aligned_cols=126 Identities=10% Similarity=0.095 Sum_probs=106.3
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-cCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE
Q 001902 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D-~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (998)
..+++.|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~d~~---~~~i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 87 (158)
T 3k3c_A 13 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 87 (158)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCE
T ss_pred HHHHHHHHHHHhcCCceEEEEECC---CcEeHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCcc
Confidence 4556789999999999999999 8 888999999999999999 999999888877766555677788888888875
Q ss_pred EEEEE-E--Ee-cC-CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 264 CGRLL-N--YK-KD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 264 ~~e~~-~--~~-kd-G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
..+.. . .+ .+ |..+|+.++++|+++.+|.+.|++++++|||++|++|++++.
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~~e~~l~~ 144 (158)
T 3k3c_A 88 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQAAEA 144 (158)
T ss_dssp EEEEEEEEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred cccceeEEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHHHHHHHHH
Confidence 54322 2 22 22 777899999999999999999999999999999999998753
No 294
>3mr0_A Sensory box histidine kinase/response regulator; PAS fold, structural genomics, PSI-2; HET: PG5; 1.49A {Burkholderia thailandensis}
Probab=99.57 E-value=1.6e-14 Score=140.25 Aligned_cols=123 Identities=15% Similarity=0.222 Sum_probs=106.2
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCC--CCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGR--NCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~--~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~ 551 (998)
|+.+++.+++++|.+|..+. ++++|+++++++||+.+++.+. .+..++||++...+...+...+..+..+..|++
T Consensus 11 l~~~~~~~~~g~w~~d~~~~---~~~~s~~~~~~~G~~~~~~~~~~~~~~~~ihpdD~~~~~~~~~~~~~~~~~~~~e~r 87 (142)
T 3mr0_A 11 FQLAVSGASAGLWDWNPKTG---AMYLSPHFKKIMGYEDHELPDEITGHRESIHPDDRARVLAALKAHLEHRDTYDVEYR 87 (142)
T ss_dssp HHHHHHHTTCEEEEECTTTC---CEEECHHHHHHTTCCGGGSCSEEC---CCBCTTTHHHHHHHHHHHHHHCCCEEEEEE
T ss_pred HHHHHHhCCcEEEEEEcCCC---eEEECHHHHHHhCCCccccCCCHHHHHhhcCHHHHHHHHHHHHHHHhCCCceEEEEE
Confidence 89999999999999999877 9999999999999999998873 356688999988888889999988888999999
Q ss_pred EEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccccccCcchhhhhHHHHHH
Q 001902 552 NYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLV 605 (998)
Q Consensus 552 ~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~ 605 (998)
++++||+.+|+..+..|++|.+ .++|+++|||+||+ .+++++++++.+
T Consensus 88 ~~~~~G~~~w~~~~~~~~~d~~g~~~~~~G~~~DITerk~------~E~~L~~~~~~l 139 (142)
T 3mr0_A 88 VRTRSGDFRWIQSRGQALWNSAGEPYRMVGWIMDVTDRKR------DEDALRVSREEL 139 (142)
T ss_dssp EECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHH------HHHHHHHHHHHH
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEcCchHHH------HHHHHHHHHHHH
Confidence 9999999999999999998875 79999999999996 445555555544
No 295
>3t50_A Blue-light-activated histidine kinase; PAS superfamily, blue-light photoreceptor, FMN binding, TRAN; HET: FMN; 1.64A {Brucella melitensis}
Probab=99.57 E-value=1.1e-14 Score=137.29 Aligned_cols=109 Identities=45% Similarity=0.827 Sum_probs=99.9
Q ss_pred HHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 477 TLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 477 i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++++++++|+++|. +|+ |+++|++|++++||+.++++|+++..+.+++........+...+..+..+..+....
T Consensus 2 ~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~e~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 78 (128)
T 3t50_A 2 ASEFTLMPMLITNPHLPDNP---IVFANPAFLKLTGYEADEVMGRNCRFLQGHGTDPAHVRAIKSAIAAEKPIDIDIINY 78 (128)
T ss_dssp CCCCCSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred ccccCcccEEEecCCCCCCc---EEEEcHHHHHHhCcCHHHHcCCCHhhhcCCccCHHHHHHHHHHHHcCCCceeEEEEE
Confidence 46889999999999 677 999999999999999999999998888888888888888999999999999999999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
+++|..+|+.+++.|+.+.+ +++++++|||++|+.
T Consensus 79 ~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DITe~k~~ 117 (128)
T 3t50_A 79 KKSGEAFWNRLHISPVHNANGRLQHFVSSQLDVTLELVP 117 (128)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHC-
T ss_pred cCCCCEEEEEEEEEEEECCCCCEEEEEEEEEEcchhhhh
Confidence 99999999999999998764 889999999999973
No 296
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.56 E-value=4.1e-15 Score=146.76 Aligned_cols=125 Identities=14% Similarity=0.177 Sum_probs=100.2
Q ss_pred ccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001902 182 KGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (998)
Q Consensus 182 ~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (998)
+++++++.+|+.+++++++||+++|. +|+|++||+++++++|++.+|++|+++.+++++ ....+...+..++..|.
T Consensus 15 ~~~~~~~~~l~~il~~~~~gi~v~D~---~g~I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~ 90 (152)
T 3mxq_A 15 NAMAKSRLLLSELLDQLSFALCIVRN---DYVIVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIES 90 (152)
T ss_dssp HHHHHHHHHHHHHHHHHCCEEEEEET---TSBEEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEcC---CCEEEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCC
Confidence 35778888999999999999999999 888999999999999999999999999988887 55556667888898887
Q ss_pred cEEEE---------EE---EEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHH
Q 001902 262 SYCGR---------LL---NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (998)
Q Consensus 262 ~~~~e---------~~---~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E 310 (998)
+.... +. ...++|..+|..++++|+.|++|++.|++++++|||+++.+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~a~ 151 (152)
T 3mxq_A 91 SSFSSWEQKPHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQASQQ 151 (152)
T ss_dssp CEEEECCSSSCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC----
T ss_pred ceeeecccccccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHhcc
Confidence 63221 11 124677888999999999999999999999999999998753
No 297
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.56 E-value=1.2e-14 Score=137.07 Aligned_cols=124 Identities=17% Similarity=0.159 Sum_probs=95.3
Q ss_pred cccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhc--CCCCCcccCCCCChHHH
Q 001902 173 EMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVV--GRNCRFLQGAGTDPEDV 250 (998)
Q Consensus 173 dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEli--G~~~~~l~~~~~~~~~~ 250 (998)
++|++++++++|+++++.|+.++++++++|+++|. +|+|+++|++|++++||+.+|++ |+++..+.+ ......
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~---~g~i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDA---DGTICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcC---CCCEEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 47899999999999999999999999999999998 78899999999999999999994 676665655 212121
Q ss_pred HHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 251 AKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 251 ~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
..+ .....+.....+.+++++||+.+|+.++..++.+ +|. .+++++++|||
T Consensus 76 ~~~-~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~-~~~-~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQL-SGFSVDERRKFEGLYERRDGSTMSVEVHLLRFNL-EGE-DRFLAISRDIT 126 (126)
T ss_dssp HHH-HTCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred HHH-HHHhcCCCcceEEEEEeCCCCEEEEEEEeEEEec-CCc-EEEEEEEEeCC
Confidence 111 1112334455667778999999999988888743 343 46789999998
No 298
>3bwl_A Sensor protein; structural genomics, APC87707.1, PAS domain, HTR-like protei protein structure initiative; HET: MSE I3A; 1.73A {Haloarcula marismortui atcc 43049}
Probab=99.55 E-value=3.1e-14 Score=134.26 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=92.4
Q ss_pred CchhhHHHHHhhhccc-cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhh--cCCCCccccCCCCCHHHH
Q 001902 457 DSVDDKVRQKEMRKGI-DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEI--LGRNCRFLQGPETDPATV 533 (998)
Q Consensus 457 di~er~~~e~e~r~~~-~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEl--iG~~~~~l~~p~~~~~~~ 533 (998)
++++|++.|++++... .|+.++++++++|+++|.+|+ |++||++|++++||+.+|+ +|++...+.+ +.....
T Consensus 1 ~~t~r~~~e~~L~~~~~~~~~l~e~~~~~i~~~d~~g~---i~~~N~a~~~~~G~~~~el~g~g~~~~~~~~--~~~~~~ 75 (126)
T 3bwl_A 1 SNAERKRREKRLEETSSRLEALFENSPDMIDVLDADGT---ICEVNQRFCAELGYDESEVLGRSIWEFDLMF--DAEDVQ 75 (126)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHCSSEEEEECTTCB---EEEECHHHHHHHTCCGGGTTTSBGGGTBTTC--CHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHhhCCcEEEEEcCCCC---EEEEcHHHHHHhCCCHHHHhhCCCchhhccC--CHHHHH
Confidence 4678888888887643 489999999999999999777 9999999999999999999 4666665655 222222
Q ss_pred HHHHHHHhcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC--EEEEEEecCC
Q 001902 534 RKIRAAIDNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK--YFIGVQLDGS 583 (998)
Q Consensus 534 ~~i~~~l~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~--~~vgi~rDIT 583 (998)
..+. ....+.....+..+.++||+.+|++++..++.+++ .++++++|||
T Consensus 76 ~~~~-~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~~~~~~~~~~~~~~~DIT 126 (126)
T 3bwl_A 76 TQLS-GFSVDERRKFEGLYERRDGSTMSVEVHLLRFNLEGEDRFLAISRDIT 126 (126)
T ss_dssp HHHH-TCCTTCEEEEEEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred HHHH-HHhcCCCcceEEEEEeCCCCEEEEEEEeEEEecCCcEEEEEEEEeCC
Confidence 2211 12234445677788899999999999998886665 7899999998
No 299
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.54 E-value=7.8e-14 Score=132.76 Aligned_cols=136 Identities=85% Similarity=1.246 Sum_probs=117.1
Q ss_pred HHHHHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
|+.++++++++++++|. +|. |+++|+++++++||+.++++|+++..+.+++........+...+..+..+..+.
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQL 80 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCce---EEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEE
Confidence 45689999999999999 888 999999999999999999999998888888888888888888899998899999
Q ss_pred EEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccccccCcchhhhhHHHHHHHHhhhhhhhhhccC
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVNEAVKEL 619 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k~~~~~v~e~~~el 619 (998)
...+++|..+|+.++..|+.+.+ +++++++|||++|+ ++.+.+.++.++....++.+++++|
T Consensus 81 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l 146 (146)
T 2v0u_A 81 INYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR-------DAAEREGVMLIKKTAENIDEAAKEL 146 (146)
T ss_dssp EEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCC-------HHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHH-------HHHHHHHHHHHHHHHhccHhhHhcC
Confidence 99999999999999999998765 78999999999985 3344455666677777777776654
No 300
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.54 E-value=1.7e-14 Score=147.20 Aligned_cols=123 Identities=11% Similarity=0.127 Sum_probs=103.2
Q ss_pred cchHHHHHHHHHhcCCcEEEEe-cCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE
Q 001902 185 PRVSDIVKDALSTFQQTFVVSD-ATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D-~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (998)
..++++|+.++++++++|+++| . +|+|+++|++|++++||+ +++|+++..++++.........+..++..|...
T Consensus 33 ~~~~~~l~~l~~~~~~~i~~~d~~---~g~i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 107 (185)
T 3kx0_X 33 VGAAEDVRRIFEHIPAILVGLEGP---DHRFVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQ 107 (185)
T ss_dssp TCCHHHHHHHHHHCSSEEEEEETT---TTEEEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCE
T ss_pred hhhHHHHHHHHhcCCceEEEEECC---CcEEEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCcc
Confidence 5677899999999999999999 8 888999999999999999 999999988888776655667778888888876
Q ss_pred EEEEEEE---ecC--CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHH
Q 001902 264 CGRLLNY---KKD--GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (998)
Q Consensus 264 ~~e~~~~---~kd--G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~ 312 (998)
..+.... +++ |..+|+.+++.|+.+.+|.+.|++++++|||++|++|++
T Consensus 108 ~~~~~~~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~ 161 (185)
T 3kx0_X 108 SGSEWRLQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQA 161 (185)
T ss_dssp EEEEEEEC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC-
T ss_pred cccceeEEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHH
Confidence 6542222 222 778899999999999999999999999999999999988
No 301
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.52 E-value=5.5e-14 Score=157.35 Aligned_cols=121 Identities=40% Similarity=0.796 Sum_probs=111.0
Q ss_pred HHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecC
Q 001902 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKD 273 (998)
Q Consensus 194 ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kd 273 (998)
++++++++|+++|....+|+|+|+|++|++++||+.+|++|+++..+.+++........+...+..+..+..+++.+++|
T Consensus 16 ~~~~~~~~i~~~D~~~~~g~i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~d 95 (332)
T 2wkq_A 16 TLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLINYTKS 95 (332)
T ss_dssp CGGGCCSEEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTT
T ss_pred HhhcCCCcEEEecCCCCCCCEEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEEEcCC
Confidence 46899999999998444666999999999999999999999999988888888888888999999999999999999999
Q ss_pred CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhh
Q 001902 274 GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKM 314 (998)
Q Consensus 274 G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~ 314 (998)
|+.+|+.++++|++|.+|.+.+++++++|||++++++++++
T Consensus 96 G~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~~e~~~~ 136 (332)
T 2wkq_A 96 GKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAAERE 136 (332)
T ss_dssp CCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHHHHH
T ss_pred CCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhhhhhhcc
Confidence 99999999999999999999999999999999998887743
No 302
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.52 E-value=7.9e-14 Score=127.78 Aligned_cols=112 Identities=13% Similarity=0.142 Sum_probs=92.6
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE-E
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG-R 266 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~-e 266 (998)
+++|+.++++++++++++|. +|+|+++|+++++++||+.++++|+++..++ ++........+..++. +..... +
T Consensus 2 e~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~ 76 (114)
T 3luq_A 2 DERLRLFTEHAPAALAMFDR---EMRYLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLA-GEVIRVEE 76 (114)
T ss_dssp CHHHHHHHHTCSSEEEEEET---TCBEEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHT-TCCEEEEE
T ss_pred hHHHHHHHhcCCceEEEEcC---CcEEEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhc-CCcceeee
Confidence 46889999999999999998 7889999999999999999999999988777 4444544445555554 554444 4
Q ss_pred EEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 267 ~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
....+++|..+|+.++..|+.+.+|.+.|++++++|||
T Consensus 77 ~~~~~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 77 DCFVRADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp EEEEC--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred eEEEcCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 47789999999999999999999999999999999997
No 303
>3nja_A Probable ggdef family protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.37A {Chromobacterium violaceum}
Probab=99.51 E-value=4.3e-14 Score=131.74 Aligned_cols=111 Identities=12% Similarity=0.003 Sum_probs=90.9
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcC--CCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILG--RNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG--~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~ 551 (998)
|+.++++++++++++|.+|. ++++|+++++++||+.++++| ..+..+.+|++.......+...+..+..+..+++
T Consensus 9 l~~~~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~e~~ 85 (125)
T 3nja_A 9 LHTAESDAGIGSWVLHMESG---RLEWSQAVHDIFGTDSATFDATEDAYFQRVHPDDRARVRRELDRHVLGDRPFDVEYR 85 (125)
T ss_dssp --------CCEEEEEETTTT---EEEECHHHHHHHTCCTTTCCCBHHHHHHHBCTTTHHHHHHHHHHHHHSCCCEEEEEE
T ss_pred HHHHHHhCCeeEEEEEcCCC---cEEECHHHHHHhCCCcccccccHHHHHhhcChhHHHHHHHHHHHHHhcCCCceEEEE
Confidence 68899999999999999887 999999999999999999999 4455677888888888888888888888999999
Q ss_pred EEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 552 NYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 552 ~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
..++||+.+|+.++..|+.+.+ +++|+++|||+||+
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~g~~~~~~g~~~DITe~k~ 125 (125)
T 3nja_A 86 IVRPDGQVRELLERNHIQRQASGQVDHLWGTVIDMTEHKQ 125 (125)
T ss_dssp EECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCC---
T ss_pred EECCCCCEEEEEEeeEEEECCCCCEEEEEEEEEecccccC
Confidence 9999999999999999998865 79999999999984
No 304
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.50 E-value=8e-14 Score=128.98 Aligned_cols=102 Identities=18% Similarity=0.185 Sum_probs=86.4
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.++++++++|+++|.+|+ |+++|++|++++||+++|++|+++..+.++..... +..+..+..+..+..++
T Consensus 15 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~e~~~~ 86 (118)
T 3olo_A 15 AHYLINNAVEASFCLGDNWQ---FLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQKNNYTFKTRYR 86 (118)
T ss_dssp HHHHHHHCSSEEEEECTTSB---EEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHHSEEEEEEEEE
T ss_pred HHHHHhcCCceEEEECCCCc---EEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhcCcEEEEEEEE
Confidence 68899999999999999877 99999999999999999999999877775433222 23344456788899999
Q ss_pred ecCCcEEEEEEEEeeeccCC--EEEEEEecCC
Q 001902 554 TKSGKKFWNLFHLQPMRDQK--YFIGVQLDGS 583 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~--~~vgi~rDIT 583 (998)
++||+.+|++++..|+.+++ +++++++|||
T Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~DIT 118 (118)
T 3olo_A 87 SQSGRIFLVEMSLTFLEDQERRFSCVFVREKS 118 (118)
T ss_dssp CTTCCEEEEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred ccCCCEEEEEEEEEEEEECCccEEEEEEEeCC
Confidence 99999999999999998777 7889999998
No 305
>2wkq_A NPH1-1, RAS-related C3 botulinum toxin substrate 1; transferase, cell adhesion, nucleotide-binding, protein engineering, RAS superfamily LOV2; HET: GTP FMN; 1.60A {Avena sativa} PDB: 2wkr_A* 2wkp_A*
Probab=99.50 E-value=1.1e-13 Score=154.76 Aligned_cols=109 Identities=91% Similarity=1.339 Sum_probs=102.2
Q ss_pred HHHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 476 TTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 476 ~i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
.++++++++|+++|. +|+ |++||++|++++||+++|++|+++..+.+++........++..+..+..+..+.+.
T Consensus 15 ~~~~~~~~~i~~~D~~~~~g~---i~~~N~a~~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 91 (332)
T 2wkq_A 15 TTLERIEKNFVITDPRLPDNP---IIFASDSFLQLTEYSREEILGRNARFLQGPETDRATVRKIRDAIDNQTEVTVQLIN 91 (332)
T ss_dssp CCGGGCCSEEEEECTTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hHhhcCCCcEEEecCCCCCCC---EEEeehHHHHHhCCCHHHHcCCCchhhcCCCCCHHHHHHHHHHHHcCCeeEEEEEE
Confidence 468999999999999 888 99999999999999999999999998999888888888899999999999999999
Q ss_pred EecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+++||+.+|++++++|+++.+ +++++++|||++|+
T Consensus 92 ~~~dG~~~~~~~~~~pi~d~~g~~~~~v~~~~DITe~k~ 130 (332)
T 2wkq_A 92 YTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVR 130 (332)
T ss_dssp ECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCC
T ss_pred EcCCCCEEEEeeEEEEeEcCCCCEEEEEEEeccCchhhh
Confidence 999999999999999999764 89999999999986
No 306
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.49 E-value=5e-14 Score=130.91 Aligned_cols=112 Identities=13% Similarity=0.100 Sum_probs=96.2
Q ss_pred cCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCC-CCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCE
Q 001902 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN-CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTP 276 (998)
Q Consensus 198 ~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~-~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~ 276 (998)
++++++.+|.. +|+++|+|+++++++||+.++++|.. +..+++|++.......+...+..+..+..+++++++||+.
T Consensus 2 a~~giw~~d~~--~~~~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~~ 79 (115)
T 3h9w_A 2 TKAIPWKINWQ--TMAFEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGHY 79 (115)
T ss_dssp -CCEEEEEETT--TTEEEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSCE
T ss_pred cceEEEEEEcC--CCcEEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCCE
Confidence 46889999943 67799999999999999999999832 2356788777777788888888888899999999999999
Q ss_pred EEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHH
Q 001902 277 FWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (998)
Q Consensus 277 ~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~ 311 (998)
+|+..+..|++|++|++.+++|+..|||++|++|+
T Consensus 80 ~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~~~ 114 (115)
T 3h9w_A 80 VWIRDVVHVVRDDSGEVEALIGFMFDISLEHHHHH 114 (115)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEECGGGGC---
T ss_pred EEEEEEEEEEECCCCCEEEEEEEEeccCccccccc
Confidence 99999999999999999999999999999998875
No 307
>3lyx_A Sensory BOX/ggdef domain protein; structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 2.00A {Colwellia psychrerythraea}
Probab=99.49 E-value=2.1e-13 Score=125.50 Aligned_cols=111 Identities=21% Similarity=0.237 Sum_probs=99.0
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.++++++++++++|.+|. |+++|+++++++||+.++++|++...+.+++........+...+..+..+..+....
T Consensus 9 ~~~~~~~~~~~i~~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (124)
T 3lyx_A 9 RAKAFDYVFDAIVVTDLQGF---IIDWNKGSETLYGYSKEQAIGQPVNMLHVPGDTEHITSEVISAVENQGKWTGEIRML 85 (124)
T ss_dssp HHHGGGTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBGGGGSCTTTHHHHHHHHHHHHHHTSCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EeehhhHHHHHhCCCHHHHcCCCHHHhcCcchhhHHHHHHHHHHHcCCcccceEEEE
Confidence 68899999999999999777 999999999999999999999998877777766667777888888898899999999
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+++|..+|+.+++.|+.+.+ +++++++|||++|+
T Consensus 86 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~ 123 (124)
T 3lyx_A 86 HKDGHIGWIESMCVPIYGENYQMVGALGINRDITKRKK 123 (124)
T ss_dssp CTTSCEEEEEEEEEEEECSTTCEEEEEEEEEECSCC--
T ss_pred ccCCCEEEEEEEEEEEECCCCCEEEEEEEEecchhhhc
Confidence 99999999999999998665 78999999999985
No 308
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.48 E-value=8.3e-14 Score=128.93 Aligned_cols=121 Identities=11% Similarity=0.133 Sum_probs=97.8
Q ss_pred ccccccchHHHHHHHHHhcCCcEEEEecCCCC-CceEEccHHHHHHcCCChhhhcCCC--CCcccCCCCChHHHHHHHHH
Q 001902 180 KEKGLPRVSDIVKDALSTFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRET 256 (998)
Q Consensus 180 ~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~d-G~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~ 256 (998)
++++|++++++|+.++++++++++++|. + |+|+++|+++++++||+.++++|.. +..+.++++.......+..
T Consensus 2 ~e~~l~~~~~~~~~~~~~~~~~i~~~d~---~~~~i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 77 (125)
T 3eeh_A 2 AKQQAAKSERRVRELTEATNDILWEFTA---DLSEVLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS- 77 (125)
T ss_dssp --------CHHHHHHHSCCCCEEEEEET---TSSCEEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHHHHHHHhcCCceEEEEEc---CCCcEEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-
Confidence 5677888999999999999999999998 6 7799999999999999999999987 3445555544444444444
Q ss_pred HHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 257 LQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 257 l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
+..+..+..+++..+++|..+|+.++..|+.+.+|.+.+++++++|||
T Consensus 78 ~~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 78 LMDGESADVECRVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp HHTTCCEEEEEEECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred HHcCCCccEEEEEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 677888889999999999999999999999999999999999999997
No 309
>2z6d_A Phototropin-2; PAS-fold, LOV-fold, alternative splicing, ATP-binding, chromophore, flavoprotein, FMN, kinase, membrane, nucleotide-binding; HET: FMN; 2.00A {Arabidopsis thaliana} PDB: 2z6c_A*
Probab=99.48 E-value=6.1e-13 Score=123.28 Aligned_cols=112 Identities=46% Similarity=0.871 Sum_probs=101.3
Q ss_pred HHHHHhhcCceEEEEc---CCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D---~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
++.++++++++++++| .+|. |+++|+++++++||+.++++|+++..+.++.........+...+..+..+..+.
T Consensus 8 ~~~~~~~~~~~i~~~d~~d~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (130)
T 2z6d_A 8 LKTALSTLQQTFVVSDATQPHCP---IVYASSGFFTMTGYSSKEIVGRNCRFLQGPDTDKNEVAKIRDCVKNGKSYCGRL 84 (130)
T ss_dssp HHHHHHHTTCEEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHhcccceeeeeccCCCCc---EEEecHHHHHHhCcCHHHHcCCChhhccCCCCCchHHHHHHHHHHcCCcceeEE
Confidence 7889999999999999 8777 999999999999999999999998888888888887888888888888888899
Q ss_pred EEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
...+++|+.+|+.+++.|+.+.+ +++++++|||++|+.
T Consensus 85 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~ 126 (130)
T 2z6d_A 85 LNYKKDGTPFWNLLTVTPIKDDQGNTIKFIGMQVEVSKYTEG 126 (130)
T ss_dssp EEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEECCTTC--
T ss_pred EEEcCCCcEEEEEEEEEEEECCCCCeeEEEEEEecchHHHHh
Confidence 99999999999999999998754 789999999999973
No 310
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.48 E-value=1.5e-13 Score=128.43 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=96.0
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC-CcEEEEEEEE
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ-TDVTVQLINY 553 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g-~~~~~e~~~~ 553 (998)
..++++++++|+++|.+|+ |+|+|+++++++||+.+|++|+++..+.+|++.......+...+..+ .....+++++
T Consensus 6 ~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~ 82 (121)
T 2kdk_A 6 GEINVKPTEFITRFAVNGK---FVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFR 82 (121)
T ss_dssp TCCCCCSSEEEEEECTTSB---EEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEE
T ss_pred cccccCCccEEEEECCCee---EEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEE
Confidence 3467899999999999887 99999999999999999999999888889988777777777777654 4468899999
Q ss_pred ecCCcEEEEEEEEeeeccCC-----EEEEEEecCCcccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK-----YFIGVQLDGSEHLE 587 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~-----~~vgi~rDITerk~ 587 (998)
++||+.+|++++.+|+++.. +++++.+|||+.++
T Consensus 83 ~~dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~~ 121 (121)
T 2kdk_A 83 AKDGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHSE 121 (121)
T ss_dssp CSSSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCCC
T ss_pred EcCCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccCC
Confidence 99999999999999998763 78999999999863
No 311
>3olo_A Two-component sensor histidine kinase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, TRA; 2.09A {Nostoc SP}
Probab=99.46 E-value=2.3e-13 Score=125.88 Aligned_cols=114 Identities=11% Similarity=0.098 Sum_probs=92.1
Q ss_pred cccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcC
Q 001902 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG 260 (998)
Q Consensus 181 e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g 260 (998)
++++++..+.++.++++++++|+++|. +|+|+++|+++++++||+.+|++|+++..+.++..... +..+..+
T Consensus 5 ~~~~e~~~~~~~~~~~~~~~~i~~~d~---~g~i~~~N~~~~~l~G~~~~el~g~~~~~~~~~~~~~~-----~~~~~~~ 76 (118)
T 3olo_A 5 NIQSELEFKFAHYLINNAVEASFCLGD---NWQFLYVNDATCRMTEYSREQLLSMNLQDIDVDFALHD-----WEEIRQK 76 (118)
T ss_dssp --CHHHHHHHHHHHHHHCSSEEEEECT---TSBEEEECHHHHHHHCCCHHHHTTCBGGGTBTTGGGSC-----HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEECC---CCcEEEEHHHHHHHHCCCHHHHhCCChhhcccccCHHH-----HHHHHhc
Confidence 445566778889999999999999998 78899999999999999999999999887775443222 3344456
Q ss_pred CcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
..+..+.+.++++|+.+|+.++..|+.+.+ ..+++++++|||
T Consensus 77 ~~~~~e~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~~~~~DIT 118 (118)
T 3olo_A 77 NNYTFKTRYRSQSGRIFLVEMSLTFLEDQE--RRFSCVFVREKS 118 (118)
T ss_dssp SEEEEEEEEECTTCCEEEEEEEEEEEEETT--EEEEEEEEEEC-
T ss_pred CcEEEEEEEEccCCCEEEEEEEEEEEEECC--ccEEEEEEEeCC
Confidence 677889999999999999999999997643 356789999997
No 312
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.46 E-value=1.6e-13 Score=131.56 Aligned_cols=109 Identities=12% Similarity=0.109 Sum_probs=86.1
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC-------cE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-------DV 546 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~-------~~ 546 (998)
|+.+++++++||+++|.+|+ |+++|++|++||||+++|++|+++..+.+++........+......+. ..
T Consensus 9 l~~i~~~~~d~i~~~D~~g~---I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (129)
T 3mfx_A 9 IELFIQHLTEAMILVNANGF---IRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPVQHP 85 (129)
T ss_dssp HHHHHTTCSSEEEEEETTSB---EEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCSCEE
T ss_pred HHHHHhcCCceEEEECCCCE---EEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCcccccccCCC
Confidence 78899999999999999888 999999999999999999999998888887765542222222222221 24
Q ss_pred EEEEEEEecCCcEEEEEEEEeeeccCC-EEEEEEecCCcc
Q 001902 547 TVQLINYTKSGKKFWNLFHLQPMRDQK-YFIGVQLDGSEH 585 (998)
Q Consensus 547 ~~e~~~~rkdG~~~wv~~~~spi~d~~-~~vgi~rDITer 585 (998)
..|+..+++||+.+|++++++|+.+++ .|+++++|+...
T Consensus 86 ~~E~~~~rkdG~~~~velsis~i~~~~~~~v~~~~~~~~~ 125 (129)
T 3mfx_A 86 AQETTLICASGKAKDVELSISYIPGHEPMFVMVMHDLEHH 125 (129)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECSSSCEEEEEEEEC---
T ss_pred ceEEEEEcCCCCEEEEEEEEEEecCCCcEEEEEEechhhh
Confidence 678999999999999999999999666 899999998654
No 313
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.45 E-value=1.3e-12 Score=117.44 Aligned_cols=107 Identities=29% Similarity=0.579 Sum_probs=94.6
Q ss_pred CcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCC--CCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 001902 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (998)
Q Consensus 200 d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (998)
.+|+++|....+|+|+++|++|++++||+.++++|++ ...+.++.........+...+..+..+..++..++++|..+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 5899999865678999999999999999999999998 45566666666667778888888888889998899999999
Q ss_pred EEEeeeeEEeCCCCCEEEEEEEEecchhh
Q 001902 278 WNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (998)
Q Consensus 278 w~~~~~spi~d~~G~v~~~v~i~~DITer 306 (998)
|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 99999999999999999999999999975
No 314
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=99.45 E-value=3.4e-12 Score=140.81 Aligned_cols=101 Identities=13% Similarity=0.113 Sum_probs=86.9
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEecCCcE
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTKSGKK 559 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~---~~~e~~~~rkdG~~ 559 (998)
+-+...+.+|+ |+|||+++..++||.++||+|+++..++||++.....+.+.+.+..+.. ...++++++|||+.
T Consensus 175 ~Fitrh~~dG~---~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~ 251 (317)
T 4dj3_A 175 IFTTTHTPGCV---FLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEY 251 (317)
T ss_dssp EEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCE
T ss_pred ceEEEecCCCe---EEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCE
Confidence 56777888777 9999999999999999999999999999999999988888888887654 46789999999999
Q ss_pred EEEEEEEeeeccCC-----EEEEEEecCCccc
Q 001902 560 FWNLFHLQPMRDQK-----YFIGVQLDGSEHL 586 (998)
Q Consensus 560 ~wv~~~~spi~d~~-----~~vgi~rDITerk 586 (998)
+|++.+.+++++.. .++++-+-|+...
T Consensus 252 vwvet~~~~~~np~s~~~e~II~~h~v~~~p~ 283 (317)
T 4dj3_A 252 VILDSSWSSFVNPWSRKVSFIIGRHKVRTSPL 283 (317)
T ss_dssp EEEEEEEEEEECSSSCCEEEEEEEEEECCCCS
T ss_pred EEEEEEEEEEECCCCCcccEEEEEEEeccCCC
Confidence 99999999998753 7777777555554
No 315
>3sw1_A Sensory box protein; light-oxygen-voltage, LOV, PAS, signaling protein; HET: FMN; 2.63A {Pseudomonas putida}
Probab=99.45 E-value=4.6e-13 Score=131.84 Aligned_cols=111 Identities=35% Similarity=0.632 Sum_probs=102.7
Q ss_pred HHHHHhhcCceEEEEcCCC---CCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDPRL---PDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G---~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
|+.++++++++|+++|.+| + |+++|++|++++||+.++++|+++..+.++.........+...+..+..+..+.
T Consensus 27 ~~~i~~~~~~~i~~~d~~~~~~~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (162)
T 3sw1_A 27 LQSMVDASNDGIVVAEKEGDDTI---LIYVNAAFEYLTGYSRDEILYQDCRFLQGDDRDQLGRARIRKAMAEGRPCREVL 103 (162)
T ss_dssp HHHHHHTCSSEEEEEEEETTEEE---EEEECHHHHHHHTCCHHHHTTSBGGGGTTTCCCCHHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhhccCcEEEEeCCCCccE---EEEECHHHHHHHCCCHHHHcCCCcceecCCCcCHHHHHHHHHHHhcCCCCcceE
Confidence 6889999999999999977 7 999999999999999999999998888888888888888888898999999999
Q ss_pred EEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
...+++|..+|+.+++.|+.+.+ +++++++|||++|+
T Consensus 104 ~~~~~~g~~~~~~~~~~~i~~~~g~~~~~~~~~~DiTe~k~ 144 (162)
T 3sw1_A 104 RNYRKDGSAFWNELSITPVKSDFDQRTYFIGIQKDVSRQVE 144 (162)
T ss_dssp EEECTTCCEEEEEEEEEEEECSSSSCEEEEEEEEECHHHHH
T ss_pred EEECCCCCEEEEEEEEEEeecCCCCEEEEEEEEEeCcHHHH
Confidence 99999999999999999998764 89999999999996
No 316
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.44 E-value=1.3e-13 Score=127.64 Aligned_cols=115 Identities=9% Similarity=-0.035 Sum_probs=104.5
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCC--CcccCCCCChHHHHHHHHHHHcCCcEE
Q 001902 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNC--RFLQGAGTDPEDVAKIRETLQNGQSYC 264 (998)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~--~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (998)
++++|+.++++++++++.+|. +|.++++|+++++++||+.++++|... ..+++|++.......+...+..+..+.
T Consensus 2 s~~~~~~l~~~~~~~i~~~d~---~~~~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~ 78 (118)
T 3icy_A 2 NAEELQALVDNIPAAIYHLDV---SGQATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLT 78 (118)
T ss_dssp HHHHHHHHHTTCCCCCEEECT---TSCEEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEE
T ss_pred cHHHHHHHHhcCCceEEEEEc---CCCceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCce
Confidence 568899999999999999998 777999999999999999999988764 457788777777788888888888899
Q ss_pred EEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 265 GRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 265 ~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
.+++.++++|..+|+.....|+.+++|.+.+++|+++|||
T Consensus 79 ~e~r~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 79 LVYRIVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEEEECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999999999999999999999998
No 317
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.44 E-value=4.8e-13 Score=130.05 Aligned_cols=126 Identities=32% Similarity=0.590 Sum_probs=104.7
Q ss_pred ccccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCC--
Q 001902 168 VRSSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGT-- 245 (998)
Q Consensus 168 ~~~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~-- 245 (998)
+....|++.++..+..+ .++++. ++|+++|..+.+|+|+|+|+++++++||+.+|++|+++..+.+++.
T Consensus 13 ~~~~~~~~~r~~~~~~~--------~~~~~~-~~i~~~d~~d~~g~i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~ 83 (149)
T 3d72_A 13 MGYLIQIMNRPNPQVEL--------GPVDTS-VALILCDLKQKDTPIVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMV 83 (149)
T ss_dssp HHHHHHHHHCSSCSSCC--------CSCCTT-SCEEEEETTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCC
T ss_pred eeeeehhhhCcchhHHH--------HhhcCC-ccEEEEeccCCCCcEEEECHHHHHHHCcCHHHHcCCChhHhCCccccc
Confidence 34446777665544322 345664 9999999443488899999999999999999999999988877764
Q ss_pred ---------ChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEec
Q 001902 246 ---------DPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVE 302 (998)
Q Consensus 246 ---------~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~D 302 (998)
.......+...+..+..+..++..+++||+.+|+.++++|+.+.+|.+.+++++++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 84 KPKSTRKYVDSNTINTMRKAIDRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp CTTCCCSSSCHHHHHHHHHHHHHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred cccccccccChHHHHHHHHHHHCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 666777888888889999999999999999999999999999999999999999887
No 318
>2v0u_A NPH1-1, LOV2; kinase, transferase, ATP-binding, serine/threonine-protein kinase, light-induced signal trans phototropin1, nucleotide-binding; HET: FMN; 1.40A {Avena sativa} PDB: 2v0w_A* 2v1b_A* 2v1a_A* 1jnu_A* 1g28_A*
Probab=99.44 E-value=6.5e-13 Score=126.26 Aligned_cols=121 Identities=40% Similarity=0.821 Sum_probs=107.1
Q ss_pred HHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEE
Q 001902 191 VKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNY 270 (998)
Q Consensus 191 l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~ 270 (998)
|+.++++++++++++|..+.+|+|+++|+++++++||+.++++|+++..+.++.........+...+..+..+..++...
T Consensus 4 l~~~~~~~~~~i~~~d~~~~~~~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (146)
T 2v0u_A 4 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYSREEILGRNCRFLQGPETDRATVRKIRDAIDNQTEVTVQLINY 83 (146)
T ss_dssp CCCTGGGSSSCEEEECTTSTTCCEEEECHHHHHHHCCCHHHHTTSCGGGGCCTTSCHHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred HHHHHhcCCCcEEEEcCCCCCceEEEEcHHHHHHHCcCHHHHcCCCHHHhcCCcCChHHHHHHHHHHhcCCCcceEEEEE
Confidence 34578999999999987222455999999999999999999999999888888887777888888999999999999999
Q ss_pred ecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHH
Q 001902 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAK 311 (998)
Q Consensus 271 ~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~ 311 (998)
+++|..+|+.++..|+.+.+|.+.+++++++|||++++.++
T Consensus 84 ~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~~~~~~ 124 (146)
T 2v0u_A 84 TKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVRDAA 124 (146)
T ss_dssp CTTCCEEEEEEEEEEEECTTSCEEEEEEEEEEESSCCCHHH
T ss_pred ecCCcEEEEEEEEEEeECCCCCEEEEEEEEeechHHHHHHH
Confidence 99999999999999999999999999999999999998433
No 319
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.44 E-value=2e-13 Score=127.63 Aligned_cols=110 Identities=13% Similarity=0.144 Sum_probs=91.4
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEe
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYT 554 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~r 554 (998)
+.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.+++........+...+.++.. ..+....+
T Consensus 2 ~~l~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINREGR---LLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEETTSB---EEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeCCCc---EEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999999877 9999999999999999999999988888887777666667776666655 77888899
Q ss_pred cCCcEEEEEEEEeeeccCC--EEEEEEecCCccccc
Q 001902 555 KSGKKFWNLFHLQPMRDQK--YFIGVQLDGSEHLEP 588 (998)
Q Consensus 555 kdG~~~wv~~~~spi~d~~--~~vgi~rDITerk~~ 588 (998)
++|..+|+.++..|+..++ +++++++|||++|+.
T Consensus 78 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~DITe~k~a 113 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKWHNEPCLFAIIKDLSKEERA 113 (126)
T ss_dssp TTSCEEEEEEEEEEEESSSSEEEEEEEEECC-----
T ss_pred cCCCEEEEEEEEEeeeECCceEEEEEEEechHHHHh
Confidence 9999999999998776655 899999999999973
No 320
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.43 E-value=2.3e-13 Score=134.13 Aligned_cols=141 Identities=20% Similarity=0.267 Sum_probs=87.2
Q ss_pred ccccccccccccccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHH
Q 001902 170 SSGEMSDEGGKEKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPED 249 (998)
Q Consensus 170 ~~~dit~~~~~e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~ 249 (998)
+..+++...+..+++..+++.|+.+++.++++++++|. +|+|+++|+++++++||+.++++|+++..++++......
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~ 97 (167)
T 1v9y_A 21 MRQDAEVIMKLTDADNAADGIFFPALEQNMMGAVLINE---NDEVMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAH 97 (167)
T ss_dssp -------------------CCHHHHHHTCSSEEEEECT---TSBEEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTH
T ss_pred HHhhHHHHHHHHHHHhhhhHHHHHHHHhCCCCEEEECC---CCcEEEECHHHHHHhCCCHHHHcCCChhhccCccccchH
Confidence 34677777888888889999999999999999999998 778999999999999999999999998887776655444
Q ss_pred HHHHHHHHHcCCc----EEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 250 VAKIRETLQNGQS----YCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 250 ~~~i~~~l~~g~~----~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
...+......+.. +..++...+++|..+|+.+++.|+ +.+|.+ +++++++|||++++++++++.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~g~~-~~~~~~~DiT~~~~~e~~l~~ 165 (167)
T 1v9y_A 98 PEYIRHNREGGKARVEGMSRELQLEKKDGSKIWTRFALSKV-SAEGKV-YYLALVRDASVEMAQKEQTRQ 165 (167)
T ss_dssp HHHHHHHHC----------CEEEEECTTSCEEEEEEEEEEE-EETTEE-EEEEEEEC-------------
T ss_pred HHHHHHHhhcCCCcccccceEEEEEcCCCcEEEEEEEEEEE-ecCCCE-EEEEEEecCcHHHHHHHHHHh
Confidence 4455444444433 455778889999999999999999 445655 589999999999999887653
No 321
>2kdk_A ARYL hydrocarbon receptor nuclear translocator-LI 2; circadian clock, PAS domain, transcription, activator, biolo rhythms, DNA-binding, nucleus; NMR {Homo sapiens}
Probab=99.43 E-value=3.8e-13 Score=125.71 Aligned_cols=111 Identities=13% Similarity=0.098 Sum_probs=94.9
Q ss_pred HHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC-cEEEEEEEEec
Q 001902 194 ALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ-SYCGRLLNYKK 272 (998)
Q Consensus 194 ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~-~~~~e~~~~~k 272 (998)
++++++++|+++|. +|+|+|+|+++++++||+.+|++|+++..+++|++.......+...+..+. ....+++++++
T Consensus 8 ~~~~~~~~i~~~d~---~g~i~~~N~~~~~~~G~~~~el~g~~~~~~~~p~d~~~~~~~~~~~~~~~~~~~~~e~r~~~~ 84 (121)
T 2kdk_A 8 INVKPTEFITRFAV---NGKFVYVDQRATAILGYLPQELLGTSCYEYFHQDDHNNLTDKHKAVLQSKEKILTDSYKFRAK 84 (121)
T ss_dssp CCCCSSEEEEEECT---TSBEEEECTHHHHHTCCCTTTSBTSBTTTTBCSSSHHHHHHHHHHHHTSSSCEEEEEEEEECS
T ss_pred cccCCccEEEEECC---CeeEEEEChhHHHHHCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEc
Confidence 56788999999998 788999999999999999999999998888888776666666666666544 46788999999
Q ss_pred CCCEEEEEeeeeEEeCCC-CCEEEEEEEEecchhhh
Q 001902 273 DGTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 273 dG~~~w~~~~~spi~d~~-G~v~~~v~i~~DITerk 307 (998)
||+.+|+.++..|++|.. |.+.+++++.+||++.+
T Consensus 85 dG~~~~~~~~~~~~~d~~~~~~~~~v~~~~~i~~~~ 120 (121)
T 2kdk_A 85 DGSFVTLKSQWFSFTNPDTKELEYIVSVNTLVLGHS 120 (121)
T ss_dssp SSCEEEEEEEEEEEECCSSSCEEEEEEEEECCSSCC
T ss_pred CCCEEEEEEEEEEEECCCCCeeeEEEEEEEeccccC
Confidence 999999999999999876 56778899999999864
No 322
>3k3c_A Protein RV1364C/MT1410; sensor, PAS, signal transduction, fatty-acid binding, sigma regulator, signaling protein; HET: PLM; 1.62A {Mycobacterium tuberculosis} PDB: 3k3d_A
Probab=99.43 E-value=2.8e-13 Score=133.24 Aligned_cols=109 Identities=10% Similarity=0.063 Sum_probs=91.4
Q ss_pred HHHHHhhcCceEEEEc-CCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 474 LATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D-~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..+.++.........+.+.+..|.....+...
T Consensus 19 ~~~~~~~~~~~i~~~d~~~~~---i~~~N~~~~~~~g~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 93 (158)
T 3k3c_A 19 VRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWR 93 (158)
T ss_dssp HHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCTTC--CSTTSBHHHHSGGGGGTTHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHhcCCceEEEEECCCcE---eHHHHHHHHHHcCCc--hhcCCcHHHhCCchhHHHHHHHHHHHHHhCCccccccee
Confidence 7899999999999999 9777 999999999999999 999999888887766666677788888888775544332
Q ss_pred ---Eec-C-CcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 553 ---YTK-S-GKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 553 ---~rk-d-G~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
.+. + |..+|+.++++|+.+.+ +++++++|||++|+
T Consensus 94 ~~~~~~~~~g~~~~~~~~~~pi~~~~g~~~g~~~~~~DITe~k~ 137 (158)
T 3k3c_A 94 LQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVR 137 (158)
T ss_dssp EEEESSSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEECHHHHH
T ss_pred EEeccCCCCcceEEEEEEEEEeECCCCCEEEEEEEEEehhHHHH
Confidence 222 2 77899999999999765 89999999999996
No 323
>3h9w_A Diguanylate cyclase with PAS/PAC sensor; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.90A {Marinobacter aquaeolei}
Probab=99.41 E-value=2.8e-13 Score=125.83 Aligned_cols=105 Identities=12% Similarity=0.081 Sum_probs=91.9
Q ss_pred cCceEEEEc-CCCCCCCEEEcCHHHHHHcCCChhhhcCCC-CccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCc
Q 001902 481 IEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRN-CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGK 558 (998)
Q Consensus 481 ~~d~i~i~D-~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~-~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~ 558 (998)
+++++|.+| .+|. ++|+|+++++++||+.+|++|.. +..+++|++.......+...+..+..+..|++++++||+
T Consensus 2 a~~giw~~d~~~~~---~~~~n~~~~~l~G~~~~e~~~~~~~~~~ihpdd~~~~~~~~~~~~~~~~~~~~e~r~~~~dG~ 78 (115)
T 3h9w_A 2 TKAIPWKINWQTMA---FEYIGPQIEALLGWPQGSWKSVEDWATRMHPEDQEWVVNFCVKQSECGVDHEADYRALHRDGH 78 (115)
T ss_dssp -CCEEEEEETTTTE---EEEECTHHHHHHCSCGGGCCBHHHHHHSBCHHHHHHHHHHHHHHHHTTCCEEEEEEEECTTSC
T ss_pred cceEEEEEEcCCCc---EEEEChhHHHHhCCChHHccCHHHHHHhcCHHHHHHHHHHHHHHHhcCCcccEEEEEEcCCCC
Confidence 568999999 5455 99999999999999999999932 345788998888888889999888889999999999999
Q ss_pred EEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 559 KFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 559 ~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
.+|+..+..|++|.+ +++|+..|||++|+.
T Consensus 79 ~~w~~~~~~~~~d~~G~~~~~~G~~~Dit~~k~~ 112 (115)
T 3h9w_A 79 YVWIRDVVHVVRDDSGEVEALIGFMFDISLEHHH 112 (115)
T ss_dssp EEEEEEEEEEEECTTSCEEEEEEEEEECGGGGC-
T ss_pred EEEEEEEEEEEECCCCCEEEEEEEEeccCccccc
Confidence 999999999998865 899999999999973
No 324
>3mjq_A Uncharacterized protein; NESG, structural genomics, PSI-2, protein structure initiati northeast structural genomics consortium; 2.60A {Desulfitobacterium hafniense}
Probab=99.41 E-value=4.3e-13 Score=125.42 Aligned_cols=118 Identities=20% Similarity=0.209 Sum_probs=90.1
Q ss_pred HHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEe
Q 001902 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYK 271 (998)
Q Consensus 192 ~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~ 271 (998)
+.++++++++|+++|. +|+|+++|+++++++||+.++++|+++..+++++........+...+..+.. ..++...+
T Consensus 2 ~~l~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 77 (126)
T 3mjq_A 2 KNFLETIEDMILIINR---EGRLLYANTAVPKKLGYTHEELMSMHILTITSAGKMAEGEKILAELFAGKKE-SLPLSLEK 77 (126)
T ss_dssp CTTGGGCSSEEEEEET---TSBEEEECTHHHHHHSCCHHHHHHSBHHHHHCTTCHHHHHHHHHHHHHTCCS-EEEEEEEC
T ss_pred hhHHhhCCceEEEEeC---CCcEEEEcHHHHHHHCCCHHHHcCCCHHHHcCchhHHHHHHHHHHHHhCCCc-eeEEEEEc
Confidence 4578999999999998 7789999999999999999999999988887776665555666666666555 77888889
Q ss_pred cCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 272 KDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 272 kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
++|..+|+.++..|+.+ +...+++++++|||++|++++++..
T Consensus 78 ~~g~~~~~~~~~~~~~~--~~~~~~~~~~~DITe~k~a~~~~~~ 119 (126)
T 3mjq_A 78 KEGTSIPAKARIWQGKW--HNEPCLFAIIKDLSKEERASSPPFL 119 (126)
T ss_dssp TTSCEEEEEEEEEEEES--SSSEEEEEEEEECC-----------
T ss_pred cCCCEEEEEEEEEeeeE--CCceEEEEEEEechHHHHhhcccch
Confidence 99999999999988765 3457889999999999999988554
No 325
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=99.40 E-value=1.3e-12 Score=143.59 Aligned_cols=101 Identities=10% Similarity=0.062 Sum_probs=86.3
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC-cEE-EEEEEEecCCcEE
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT-DVT-VQLINYTKSGKKF 560 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~-~~~-~e~~~~rkdG~~~ 560 (998)
.-+...+.+|+ |+|+|+++..++||.++||+|++...++||++.....+.+.+.+..++ ... .++++++|||+.+
T Consensus 166 ~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~v 242 (309)
T 3gdi_A 166 IFTTTHTPNCL---FQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYI 242 (309)
T ss_dssp EEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEE
T ss_pred eEEEEecCCCe---EEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEE
Confidence 46777888777 999999999999999999999999999999998888888888887554 455 6899999999999
Q ss_pred EEEEEEeeeccCC-----EEEEEEecCCccc
Q 001902 561 WNLFHLQPMRDQK-----YFIGVQLDGSEHL 586 (998)
Q Consensus 561 wv~~~~spi~d~~-----~~vgi~rDITerk 586 (998)
|++.+.+++.+.. .++|+-+-|+...
T Consensus 243 wvet~~~~~~np~s~~~e~ii~~h~v~~gp~ 273 (309)
T 3gdi_A 243 TLDTSWSSFINPWSRKISFIIGRHKVRVGPL 273 (309)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEEEECCS
T ss_pred EEEEEEEEEECCCCCcccEEEEEEEEccCCC
Confidence 9999988887653 7888877777654
No 326
>3luq_A Sensor protein; PAS, histidine, kinase, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: PGE; 2.49A {Geobacter sulfurreducens}
Probab=99.40 E-value=1.9e-12 Score=118.36 Aligned_cols=106 Identities=14% Similarity=0.118 Sum_probs=86.8
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++|+++|.+|+ |+++|++|++++||+.++++|+++..+. |+........+...+.++.....+....
T Consensus 5 ~~~~~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (114)
T 3luq_A 5 LRLFTEHAPAALAMFDREMR---YLAVSRRWREDYGLGDGDILGMSHYDIF-PEIGEEWKSVHRRGLAGEVIRVEEDCFV 80 (114)
T ss_dssp HHHHHHTCSSEEEEEETTCB---EEEECHHHHHHTTCCSSCCTTCBHHHHC-TTCCHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred HHHHHhcCCceEEEEcCCcE---EEEECHHHHHHHCCCHHHHcCCcHHHHC-CccHHHHHHHHHHHhcCCcceeeeeEEE
Confidence 78899999999999999777 9999999999999999999999987776 5555665555666665444344444788
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCC
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGS 583 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDIT 583 (998)
+++|..+|+.++..|+.+.+ +++++++|||
T Consensus 81 ~~~g~~~~~~~~~~p~~~~~g~~~~~~~~~~DIT 114 (114)
T 3luq_A 81 RADGRTQWLRWEVRPWYEGEGRVGGVVIFTEDIT 114 (114)
T ss_dssp C--CCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred cCCCcEEEEEEEEEEeECCCCCEEEEEEEEeeCC
Confidence 99999999999999998765 7999999998
No 327
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.40 E-value=4.8e-12 Score=119.13 Aligned_cols=118 Identities=27% Similarity=0.537 Sum_probs=101.0
Q ss_pred HHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCC--CCcccCCCCChHHHHHHHHHHHcCCcEEEE
Q 001902 189 DIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRN--CRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (998)
Q Consensus 189 ~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~--~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (998)
+.+...++.++++++++|....+|+|+++|+++++++||+.++++|++ +..+.+++........+...+..+..+..+
T Consensus 19 ~~~~~~~~~~~~~i~~~d~~~~~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (138)
T 2l0w_A 19 DTIIRKFEGQSRKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKVE 98 (138)
T ss_dssp HHHHHHHTTTTSEEEEEESSSTTCBEEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHhcCCCCEEEEecCCCCCEEEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCceeE
Confidence 445566777999999999732245699999999999999999999998 456667666666677788888888888888
Q ss_pred EEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhh
Q 001902 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (998)
Q Consensus 267 ~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITer 306 (998)
...++++|..+|+.+++.|+.+.+|.+.+++++++|||++
T Consensus 99 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 99 IAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 8889999999999999999999999999999999999975
No 328
>3kx0_X Uncharacterized protein RV1364C/MT1410; PAS domain, sensory domain, mycobacteium tuberculos molecule binding domain; 2.30A {Mycobacterium tuberculosis}
Probab=99.39 E-value=3.9e-13 Score=136.94 Aligned_cols=132 Identities=11% Similarity=0.093 Sum_probs=91.3
Q ss_pred HHHHHhhcCceEEEEc-CCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 474 LATTLERIEKNFVITD-PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D-~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
|+.++++++++|+++| .+|+ |+++|++|++++||+ +++|+++..+.++.........+...+..|.....+...
T Consensus 39 l~~l~~~~~~~i~~~d~~~g~---i~~~N~a~~~l~G~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 113 (185)
T 3kx0_X 39 VRRIFEHIPAILVGLEGPDHR---FVAVNAAYRGFSPLL--DTVGQPAREVYPELEGQQIYEMLDRVYQTGEPQSGSEWR 113 (185)
T ss_dssp HHHHHHHCSSEEEEEETTTTE---EEEECHHHHHHCCCC--SCTTSBHHHHCTTSCSSSSHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHhcCCceEEEEECCCcE---EEEEcHHHHHHcCCc--cccCCcHHHHCCchhhhhHHHHHHHHHHcCCccccccee
Confidence 7899999999999999 9777 999999999999999 999999888888776666667788888788876555333
Q ss_pred E---ecC--CcEEEEEEEEeeeccCC----EEEEEEecCCccccccccCcchhhhhHHHHHHHHhhhhh
Q 001902 553 Y---TKS--GKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENV 612 (998)
Q Consensus 553 ~---rkd--G~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k~~~~~v 612 (998)
. +++ |..+|+.++++|+.+.+ +++++++|||++|+.+++ ....+++.++.++....++
T Consensus 114 ~~~~~~~~gg~~~~~~~~~~pi~~~~g~~~g~~~~~~DITerk~~e~~--~~~ll~~~~~~l~~~~~~~ 180 (185)
T 3kx0_X 114 LQTDYDGSGVEERYFDFVVTPRRRADGSIEGVQLIVDDVTSRVRARQA--AEARVEELSERYRNVRDSA 180 (185)
T ss_dssp EC--------CCEEEEEEEEEEECTTSCEEEEEEEEEECHHHHTTCC----------------------
T ss_pred EEeeccCCCCccEEEEEEEEEEECCCCCEEEEEEEEEeCCHHHHHHHH--HHHHHHHHHHHHHHHHhhh
Confidence 2 223 78899999999998765 799999999999973322 1222445555554444433
No 329
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=99.38 E-value=2e-12 Score=142.76 Aligned_cols=103 Identities=11% Similarity=0.079 Sum_probs=88.2
Q ss_pred CceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhc-CCcE-EEEEEEEecCCcE
Q 001902 482 EKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDN-QTDV-TVQLINYTKSGKK 559 (998)
Q Consensus 482 ~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~-g~~~-~~e~~~~rkdG~~ 559 (998)
.+-+...+.+|+ |+|+|+++..++||.++||+|+++..++||++.....+.+.+.+.. |... ..++++++|||++
T Consensus 176 ~~Fitrh~~dG~---~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~ 252 (320)
T 4dj2_A 176 RIFTTRHTPSCL---FQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEY 252 (320)
T ss_dssp CEEEEEECTTCB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCE
T ss_pred ceEEEEecCCce---EEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCE
Confidence 456777888777 9999999999999999999999999999999988888888888874 4445 4699999999999
Q ss_pred EEEEEEEeeeccCC-----EEEEEEecCCcccc
Q 001902 560 FWNLFHLQPMRDQK-----YFIGVQLDGSEHLE 587 (998)
Q Consensus 560 ~wv~~~~spi~d~~-----~~vgi~rDITerk~ 587 (998)
+|++.+.+++.+.. ++||.-+-|+....
T Consensus 253 vwvet~~~~~~np~s~~~e~II~~h~v~~gp~~ 285 (320)
T 4dj2_A 253 VTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLN 285 (320)
T ss_dssp EEEECEEEEEECTTTCSEEEEEEEEEESSCCSS
T ss_pred EEEEEEEEEEECCCCCCccEEEEEEEEccCCCC
Confidence 99999998888753 88898888887653
No 330
>3mxq_A Sensor protein; PSI2, MCSG, structural genomics, protein structure initiativ midwest center for structural genomics; 2.78A {Vibrio cholerae o1 biovar el tor}
Probab=99.37 E-value=7.9e-13 Score=130.36 Aligned_cols=110 Identities=14% Similarity=0.161 Sum_probs=87.4
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEE----
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQ---- 549 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e---- 549 (998)
|+.+++++++||+++|.+|+ |++||+++++++|++++|++|+++.++.+. ........+..++..|.+....
T Consensus 24 l~~il~~~~~gi~v~D~~g~---I~~~N~a~~~~~G~~~~eviG~~~~~~~p~-~~~~~~~~l~~vl~~G~~~~~~~~~~ 99 (152)
T 3mxq_A 24 LSELLDQLSFALCIVRNDYV---IVKVNEYFESRVIFDGETMQGKNILELFPE-SADYLKRKIDTALVIESSSFSSWEQK 99 (152)
T ss_dssp HHHHHHHHCCEEEEEETTSB---EEEECHHHHHTSSSCHHHHTTSBHHHHSGG-GHHHHHHHHHHHHHHTSCEEEECCSS
T ss_pred HHHHHhcCCCCEEEEcCCCE---EEEECHHHHHHHCcCHHHHCCCCHHHhcCC-hHHHHHHHHHHHHhcCCceeeecccc
Confidence 78999999999999999888 999999999999999999999998888877 5555667788888888653221
Q ss_pred -----EEE---EecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 550 -----LIN---YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 550 -----~~~---~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
+.. ..++|+.+|..++++|++|.+ +++++++|||+++.
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~ti~Pl~d~~G~v~gv~~ii~DVTe~~~ 149 (152)
T 3mxq_A 100 PHLLPFKSSRPVSGEEEQMYQNLEVIPIHSEDGTIEHVCLCVYDVTIQAS 149 (152)
T ss_dssp SCSSCC----------CCEEEEEEEEEEECTTSCEEEEEEEEEEEECC--
T ss_pred cccccccccCCCCCCCcEEEEEEEEEEEECCCCCEEEEEEEEEECCHHHh
Confidence 111 236778889999999999865 89999999999985
No 331
>3mfx_A Sensory BOX/ggdef family protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Shewanella oneidensis}
Probab=99.36 E-value=2.2e-12 Score=123.57 Aligned_cols=112 Identities=11% Similarity=0.065 Sum_probs=85.2
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcC-------
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG------- 260 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g------- 260 (998)
.+.++.+++++++||+++|. +|+|+++|+++++++||+.+|++|+++..++++.........+......+
T Consensus 6 ~~~l~~i~~~~~d~i~~~D~---~g~I~~~N~aa~~l~G~~~~el~G~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (129)
T 3mfx_A 6 LETIELFIQHLTEAMILVNA---NGFIRSCNQRSAELLDCPQVSLKGQDWRNFLTEHHQARYDNLLSHDVQLGTNCGQPV 82 (129)
T ss_dssp HHHHHHHHTTCSSEEEEEET---TSBEEEECHHHHHHTTSCHHHHTTSBGGGGBCTTCCGGGGCTTC----------CCS
T ss_pred HHHHHHHHhcCCceEEEECC---CCEEEeEhHHHHHHHCcCHHHHcCCcHHHHcChHhHHHHHHHHHHHHhcCccccccc
Confidence 46789999999999999999 78899999999999999999999999998887766443222222111211
Q ss_pred CcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchh
Q 001902 261 QSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (998)
Q Consensus 261 ~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITe 305 (998)
..+..++..+++||+.+|++++++|+.+ ++. .++++++|+..
T Consensus 83 ~~~~~E~~~~rkdG~~~~velsis~i~~--~~~-~~v~~~~~~~~ 124 (129)
T 3mfx_A 83 QHPAQETTLICASGKAKDVELSISYIPG--HEP-MFVMVMHDLEH 124 (129)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEEEEECS--SSC-EEEEEEEEC--
T ss_pred CCCceEEEEEcCCCCEEEEEEEEEEecC--CCc-EEEEEEechhh
Confidence 1245788999999999999999999973 332 47889999753
No 332
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.36 E-value=5.1e-12 Score=134.17 Aligned_cols=119 Identities=15% Similarity=0.209 Sum_probs=94.0
Q ss_pred ccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHc------------CCChhhhcCCCCCcccCCCCChHHHH
Q 001902 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMT------------GYTSKEVVGRNCRFLQGAGTDPEDVA 251 (998)
Q Consensus 184 l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~------------Gys~eEliG~~~~~l~~~~~~~~~~~ 251 (998)
+.....+++.++++++++|+++|. +|+|+|+|++|++++ ||+.++++|+++..+++. .....
T Consensus 17 ~~~e~~~l~~iLd~~~~~vii~D~---~g~I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~ 90 (233)
T 3vol_A 17 RGSHMARIKSALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQR 90 (233)
T ss_dssp -CTHHHHHHHHHTTSSSEEEEEET---TSBEEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHH
T ss_pred hHHHHHHHHHHHhcCCCcEEEECC---CCcEEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHH
Confidence 344557889999999999999999 888999999999999 899999999999877653 23333
Q ss_pred HHHHHHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhc
Q 001902 252 KIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKML 315 (998)
Q Consensus 252 ~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~ 315 (998)
.++..+. ..+..++. .+|. |+.++++|++|++|++.|++++++|||+++++|++++.
T Consensus 91 ~~~~~~~--~~~~~~~~---~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~~e~ei~~ 147 (233)
T 3vol_A 91 HLLANLT--GVHKAELN---LGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHRAEQEVSQ 147 (233)
T ss_dssp HHHHTCC--SCEEEEEE---ETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHHHHHHHHH
T ss_pred HHHHhcc--cceeEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHHHHHHHHH
Confidence 3433322 23444443 3563 77899999999999999999999999999999988543
No 333
>3icy_A Sensor protein; sensory box histidine kinase/response regulator domain, kinase, chlorobium tepidum TLS, PSI-2; 2.68A {Chlorobaculum tepidum}
Probab=99.34 E-value=1.3e-12 Score=120.80 Aligned_cols=107 Identities=11% Similarity=0.013 Sum_probs=97.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCC--ccccCCCCCHHHHHHHHHHHhcCCcEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNC--RFLQGPETDPATVRKIRAAIDNQTDVTVQLI 551 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~--~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~ 551 (998)
|+.++++++++|+.+|.+|. ++++|+++++++||+.++++|... ..+++|++.......+...+..+..+..|++
T Consensus 6 ~~~l~~~~~~~i~~~d~~~~---~~~~n~~~~~~~G~~~~~~~~~~~~~~~~i~p~d~~~~~~~~~~~~~~~~~~~~e~r 82 (118)
T 3icy_A 6 LQALVDNIPAAIYHLDVSGQ---ATIRFRPPAFLKTLVSEHAGTTRLNTLSMIHHDDRHMLSNAYSKLREAKHSLTLVYR 82 (118)
T ss_dssp HHHHHTTCCCCCEEECTTSC---EEECCCCCGGGGGGEEEETTEEEEGGGGGBCGGGHHHHHHHHHHHHHSCCEEEEEEE
T ss_pred HHHHHhcCCceEEEEEcCCC---ceEEechhHhhcCCCHHHccCChhHHHHHcCHHHHHHHHHHHHHHHhcCCCceEEEE
Confidence 78899999999999999887 999999999999999999988763 5678899888888888888888889999999
Q ss_pred EEecCCcEEEEEEEEeeeccCC----EEEEEEecCC
Q 001902 552 NYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGS 583 (998)
Q Consensus 552 ~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDIT 583 (998)
.+++||+.+|+..+..|+.+++ +++|+++|||
T Consensus 83 ~~~~~g~~~w~~~~~~~~~~~~g~~~~~~g~~~DIT 118 (118)
T 3icy_A 83 IVTPEGKLHWIEDHMRSSFSDDGLFSGIDGILCEVT 118 (118)
T ss_dssp EECTTCCEEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EECCCCCEEEEEEEEEEEECCCCCEEEEEEEEEecC
Confidence 9999999999999999999875 6899999998
No 334
>1v9y_A Heme PAS sensor protein; signaling protein; HET: HEM; 1.32A {Escherichia coli} SCOP: d.110.3.2 PDB: 1v9z_A* 1vb6_A* 1s67_L* 1s66_L*
Probab=99.32 E-value=5.9e-12 Score=123.85 Aligned_cols=112 Identities=23% Similarity=0.357 Sum_probs=86.5
Q ss_pred cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc----EEE
Q 001902 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD----VTV 548 (998)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~----~~~ 548 (998)
.|+.++++++++|+++|.+|. |+++|++|++++||+.++++|+++..+.++.........+......+.. +..
T Consensus 41 ~~~~~l~~~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (167)
T 1v9y_A 41 IFFPALEQNMMGAVLINENDE---VMFFNPAAEKLWGYKREEVIGNNIDMLIPRDLRPAHPEYIRHNREGGKARVEGMSR 117 (167)
T ss_dssp CHHHHHHTCSSEEEEECTTSB---EEEECHHHHHHHSCCGGGTTTSBGGGGSCGGGTTTHHHHHHHHHC----------C
T ss_pred HHHHHHHhCCCCEEEECCCCc---EEEECHHHHHHhCCCHHHHcCCChhhccCccccchHHHHHHHHhhcCCCcccccce
Confidence 489999999999999999777 9999999999999999999999988887776655555555555555433 456
Q ss_pred EEEEEecCCcEEEEEEEEeeeccCC--EEEEEEecCCcccc
Q 001902 549 QLINYTKSGKKFWNLFHLQPMRDQK--YFIGVQLDGSEHLE 587 (998)
Q Consensus 549 e~~~~rkdG~~~wv~~~~spi~d~~--~~vgi~rDITerk~ 587 (998)
+....+++|..+|+.+++.|+.+++ +++++++|||++|+
T Consensus 118 ~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~DiT~~~~ 158 (167)
T 1v9y_A 118 ELQLEKKDGSKIWTRFALSKVSAEGKVYYLALVRDASVEMA 158 (167)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEETTEEEEEEEEEC------
T ss_pred EEEEEcCCCcEEEEEEEEEEEecCCCEEEEEEEecCcHHHH
Confidence 7888999999999999999996555 78999999999996
No 335
>1byw_A Protein (human ERG potassium channel); PAS domain, potassium channel domain, membrane protein; 2.60A {Homo sapiens} SCOP: d.110.3.6
Probab=99.32 E-value=1.7e-11 Score=110.01 Aligned_cols=103 Identities=30% Similarity=0.546 Sum_probs=87.4
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~--~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~ 560 (998)
++|+++|....++.|+++|++|++++||+.++++|++ ...+.+++........+...+..+..+..+....+++|+.+
T Consensus 2 ~~i~i~d~~~~~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 81 (110)
T 1byw_A 2 RKFIIANARVENCAVIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPCTQRRAAAQIAQALLGAEERKVEIAFYRKDGSCF 81 (110)
T ss_dssp CEEEEEETTSSSCBEEEECHHHHHHHTCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHHHTTCCEEEEEEEECTTSCEE
T ss_pred CCEEEEeccCCCCcEEEECHHHHHHhCCCHHHHccCCCccccccCCcCCHHHHHHHHHHHhcCCCceEEEEEEcCCCCEE
Confidence 6899999752223399999999999999999999998 55566666666667778888888888899999999999999
Q ss_pred EEEEEEeeeccCC----EEEEEEecCCcc
Q 001902 561 WNLFHLQPMRDQK----YFIGVQLDGSEH 585 (998)
Q Consensus 561 wv~~~~spi~d~~----~~vgi~rDITer 585 (998)
|+.+++.|+.+.+ +++++++|||+|
T Consensus 82 ~~~~~~~~~~~~~g~~~~~~~~~~DiTe~ 110 (110)
T 1byw_A 82 LCLVDVVPVKNEDGAVIMFILNFEVVMEK 110 (110)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEEEEEEC
T ss_pred EEEEEEEEeecCCCCEEEEEEEEEeccCC
Confidence 9999999998765 789999999986
No 336
>3eeh_A Putative light and redox sensing histidine kinase; structural genomic MCSG, protein structure initiative, midwest center for STRU genomics; HET: PG5; 1.95A {Haloarcula marismortui}
Probab=99.32 E-value=3.2e-12 Score=118.06 Aligned_cols=106 Identities=8% Similarity=0.071 Sum_probs=91.4
Q ss_pred HHHHHhhcCceEEEEcCC-CCCCCEEEcCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~-G~d~~I~~vN~a~~~l~Gy~~eEliG~~--~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
|+.++++++++++++|.+ |. |+++|+++++++||+.++++|++ +..+.+|++.......+.. +..+..+..++
T Consensus 13 ~~~~~~~~~~~i~~~d~~~~~---i~~~n~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~e~ 88 (125)
T 3eeh_A 13 VRELTEATNDILWEFTADLSE---VLVINSAYEDIWGRSVAKLRENPHDFLNGIHPEDRELMKDTMQS-LMDGESADVEC 88 (125)
T ss_dssp HHHHHSCCCCEEEEEETTSSC---EEEECTHHHHHHSSCHHHHHHCGGGGGGGBCHHHHHHHHHHHHH-HHTTCCEEEEE
T ss_pred HHHHHhcCCceEEEEEcCCCc---EEEecHHHHHHHCCCHHHHccCcHHHHHhcCHHHHHHHHHHHHH-HHcCCCccEEE
Confidence 789999999999999997 77 99999999999999999999987 4556677666555555555 56777788999
Q ss_pred EEEecCCcEEEEEEEEeeeccCC----EEEEEEecCC
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGS 583 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDIT 583 (998)
+..+++|+.+|+.++..|+.+.+ +++++++|||
T Consensus 89 ~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~DIT 125 (125)
T 3eeh_A 89 RVNATEEYQRWVWIQGEPITNDAGETVRVAGFARDIT 125 (125)
T ss_dssp EECGGGTTCEEEEEEEEEEECTTSCEEEEEEEEEECC
T ss_pred EEEcCCCCEEEEEEecEEEECCCCCEEEEEEEEEecC
Confidence 99999999999999999999854 7999999998
No 337
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.31 E-value=2.4e-13 Score=165.22 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=106.4
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEE
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRL 267 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~ 267 (998)
.+.+..+++++.++|+++|. +|+|+|||++|++++||+.+|++|++...+.+++.. .....+...+..|+.+.+|+
T Consensus 517 ~~~~~~lle~a~~~i~~~D~---~grI~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~-~~~~~i~~~l~~g~~~~~E~ 592 (635)
T 4eho_A 517 VPQASSQVHASMQPVLITDA---EGRILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESN-DFLRNVAELIDHGRGWRGEV 592 (635)
T ss_dssp SSSHHHHHHHCSSCCEEEET---TCCEEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCT-HHHHHHHHHHHHCCCBCCCC
T ss_pred HHHHHHHHHhCCCcEEEECC---CCeEeeHHHHHHHHHCcChHHHcCcchhhccCCCCH-HHHHHHHHHHHcCCcEEEEE
Confidence 34577889999999999999 778999999999999999999999987666666554 45667788888899999999
Q ss_pred EEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHH
Q 001902 268 LNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGA 310 (998)
Q Consensus 268 ~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E 310 (998)
+.+++||+.+|+.+++.|++|.+|+++|++++++|||+||++|
T Consensus 593 ~~~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~aE 635 (635)
T 4eho_A 593 LLRGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTAD 635 (635)
T ss_dssp EECCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCCC
T ss_pred EEEccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhCC
Confidence 9999999999999999999999999999999999999999865
No 338
>2l0w_A Potassium voltage-gated channel, subfamily H (EAG member 2, isoform CRA_B; HERG, PAS domain, voltage-gated potassium channel, membrane; NMR {Homo sapiens} PDB: 2l1m_A 2l4r_A
Probab=99.30 E-value=1.9e-11 Score=114.98 Aligned_cols=109 Identities=28% Similarity=0.518 Sum_probs=95.6
Q ss_pred HHHHHhhcCceEEEEcC---CCCCCCEEEcCHHHHHHcCCChhhhcCCC--CccccCCCCCHHHHHHHHHHHhcCCcEEE
Q 001902 474 LATTLERIEKNFVITDP---RLPDNPIIFASDSFLELTEYSREEILGRN--CRFLQGPETDPATVRKIRAAIDNQTDVTV 548 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~---~G~d~~I~~vN~a~~~l~Gy~~eEliG~~--~~~l~~p~~~~~~~~~i~~~l~~g~~~~~ 548 (998)
+...+++++++|+++|. +|+ |+++|++|++++||+.++++|++ ...+.+++........+...+..+..+..
T Consensus 21 ~~~~~~~~~~~i~~~d~~~~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (138)
T 2l0w_A 21 IIRKFEGQSRKFIIANARVENCA---VIYCNDGFCELCGYSRAEVMQRPCTCDFLHGPRTQRRAAAQIAQALLGAEERKV 97 (138)
T ss_dssp HHHHHTTTTSEEEEEESSSTTCB---EEEECSHHHHHHSCCHHHHTTSBTTCGGGCCTTCCHHHHHHHHHHTTCSSCEEE
T ss_pred HHHHHhcCCCCEEEEecCCCCCE---EEEeCHHHHHHhCCCHHHHcCCCCcccccCCcccchhHHHHHHHHHhhcCCcee
Confidence 34567779999999999 888 99999999999999999999998 56677777777777788888888888889
Q ss_pred EEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcc
Q 001902 549 QLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEH 585 (998)
Q Consensus 549 e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITer 585 (998)
+....+++|+.+|+.+++.|+.+.+ +++++++|||+|
T Consensus 98 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~~~~~Dit~~ 138 (138)
T 2l0w_A 98 EIAFYRKDGSCFLCLVDVVPVKNEDGAVIMFILNFEVVMEK 138 (138)
T ss_dssp EEEEECTTSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEEEEEeCCCCCEEEEEEEEEeccCC
Confidence 9999999999999999999998764 789999999986
No 339
>4eho_A Bacteriophytochrome, PAS/PAC sensor; photoreceptor, bacteriopbhytochrome; HET: MSE BLA; 2.90A {Rhodopseudomonas palustris tie-1}
Probab=99.28 E-value=2e-12 Score=157.07 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=100.7
Q ss_pred cHHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 473 DLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 473 ~l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
.+..++++++++|+++|.+|+ |++||++|++|+||+.+|++|++...+.++++... ...+.+.+..++.+.+|+++
T Consensus 519 ~~~~lle~a~~~i~~~D~~gr---I~~~N~a~~~l~G~s~~e~~g~~~l~~~~~~~~~~-~~~i~~~l~~g~~~~~E~~~ 594 (635)
T 4eho_A 519 QASSQVHASMQPVLITDAEGR---ILLMNDSFRDMLPAGSPSAVHLDDLAGFFVESNDF-LRNVAELIDHGRGWRGEVLL 594 (635)
T ss_dssp SHHHHHHHCSSCCEEEETTCC---EEEECHHHHTTSCSSCCCCCSSGGGTTSSSSCTHH-HHHHHHHHHHCCCBCCCCEE
T ss_pred HHHHHHHhCCCcEEEECCCCe---EeeHHHHHHHHHCcChHHHcCcchhhccCCCCHHH-HHHHHHHHHcCCcEEEEEEE
Confidence 478899999999999999777 99999999999999999999998776777776554 56777888888889999999
Q ss_pred EecCCcEEEEEEEEeeeccCC----EEEEEEecCCccccc
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEP 588 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~ 588 (998)
+++||+.+|+.+++.|++|.+ +++++++|||+||+.
T Consensus 595 ~~~dG~~~~~~~~~~pv~d~~G~v~g~v~i~~DITerK~a 634 (635)
T 4eho_A 595 RGAGNRPLPLAVRADPVTRTEDQSLGFVLIFSDATDRRTA 634 (635)
T ss_dssp CCSSSSCEECCCCEEEECSTTSSCCEEEECCCCCSSSCCC
T ss_pred EccCCcEEEEEEEEEEEECCCCCEEEEEEEEEeCchHhhC
Confidence 999999999999999999876 999999999999973
No 340
>3d72_A Vivid PAS protein VVD; circadian, photoreceptor, blue-light, LOV, signaling protein; HET: FAD; 1.65A {Neurospora crassa} PDB: 3is2_A* 2pd8_A* 3hjk_A* 2pdr_A* 2pd7_A* 2pdt_A* 3hji_A* 3rh8_B*
Probab=99.27 E-value=1.5e-11 Score=119.41 Aligned_cols=103 Identities=39% Similarity=0.797 Sum_probs=89.9
Q ss_pred HHHHhhcCceEEEEc---CCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCC-----------CHHHHHHHHHHH
Q 001902 475 ATTLERIEKNFVITD---PRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPET-----------DPATVRKIRAAI 540 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D---~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~-----------~~~~~~~i~~~l 540 (998)
..++++. ++|+++| .+|+ |+++|++|++++||+.+|++|+++..+.+++. .......+...+
T Consensus 29 ~~~~~~~-~~i~~~d~~d~~g~---i~~~N~a~~~l~G~~~~el~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (149)
T 3d72_A 29 LGPVDTS-VALILCDLKQKDTP---IVYASEAFLYMTGYSNAEVLGRNCRFLQSPDGMVKPKSTRKYVDSNTINTMRKAI 104 (149)
T ss_dssp CCSCCTT-SCEEEEETTSTTCC---EEEECHHHHHHHCCCHHHHTTSCGGGGGSTTSCCCTTCCCSSSCHHHHHHHHHHH
T ss_pred HHhhcCC-ccEEEEeccCCCCc---EEEECHHHHHHHCcCHHHHcCCChhHhCCccccccccccccccChHHHHHHHHHH
Confidence 3466675 9999999 6777 99999999999999999999999888888774 667777888888
Q ss_pred hcCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEec
Q 001902 541 DNQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLD 581 (998)
Q Consensus 541 ~~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rD 581 (998)
..+..+..+...+++||+.+|+.++++|+++.+ +++++++|
T Consensus 105 ~~~~~~~~e~~~~~~dG~~~~~~~~~~~i~~~~g~~~~~v~~~~D 149 (149)
T 3d72_A 105 DRNAEVQVEVVNFKKNGQRFVNFLTMIPVRDETGEYRYSMGFQCE 149 (149)
T ss_dssp HHTCCEEEEEEEECTTCCEEEEEEEEEEEECTTSSEEEEEEECCC
T ss_pred HCCCceEEEEEEECCCCCEEEEEEEEEEEEcCCCCEEEEEEEEeC
Confidence 888889999999999999999999999999765 78888776
No 341
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.26 E-value=2.2e-11 Score=131.45 Aligned_cols=139 Identities=13% Similarity=0.074 Sum_probs=112.2
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLI 743 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV 743 (998)
+.|++...++.|+++.||++.. .+..+++|+........ ...+..|+.+++.+. +..++++++++...+..|+|
T Consensus 14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGT---TYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTS---TTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCC---HHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 4799999999999999999975 46899999987532111 235778999999984 67788999999998999999
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 785 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-------------------------------------- 785 (998)
|||++|.+|.+.+.. ......++.+++.+|..||+
T Consensus 89 ~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999876421 12234678899999999998
Q ss_pred ---------------------CCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 786 ---------------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 786 ---------------------~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 448999999999999876566799999874
No 342
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.24 E-value=4.6e-11 Score=112.41 Aligned_cols=106 Identities=17% Similarity=0.256 Sum_probs=80.8
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcC------------CChhhhcCCCCCcccCCCCChHHHHHHHH
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTG------------YTSKEVVGRNCRFLQGAGTDPEDVAKIRE 255 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~G------------ys~eEliG~~~~~l~~~~~~~~~~~~i~~ 255 (998)
..+++++++++++||+++|. +|+|+|+|++|++++| |+.++++|+++..+.+. ......+..
T Consensus 4 ~~rl~~il~~~~~gviv~D~---~g~I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~ 77 (121)
T 4hi4_A 4 MARIASALDNVSANVMIADN---DLNIIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLA 77 (121)
T ss_dssp HHHHHHHHTTSSSEEEEEET---TCBEEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHH
T ss_pred HHHHHHHHhcCCccEEEEcC---CCeEEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHh
Confidence 36789999999999999999 7789999999999995 89999999998877643 222223332
Q ss_pred HHHcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhh
Q 001902 256 TLQNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (998)
Q Consensus 256 ~l~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITer 306 (998)
.+. ..+..++. .+|. ++.++++|++|.+|++.|++++++|||++
T Consensus 78 ~~~--~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 78 NLT--GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp HCS--SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred CcC--CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 222 33444433 3554 55789999999999999999999999974
No 343
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.24 E-value=1e-11 Score=115.56 Aligned_cols=92 Identities=11% Similarity=0.065 Sum_probs=70.5
Q ss_pred HHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEec
Q 001902 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTK 555 (998)
Q Consensus 476 ~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rk 555 (998)
.++++++++|+++|.+|+ |+|+|+++++++||+++|++|+++..+.||++.......+. ..+.....++++++|
T Consensus 3 ~lle~~~d~i~v~d~~G~---i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLASNGR---IIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECTTSB---EEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcCCCe---EEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 478999999999999887 99999999999999999999999988999998776554432 223334568889999
Q ss_pred CCcEEEEEEEEeeeccCC
Q 001902 556 SGKKFWNLFHLQPMRDQK 573 (998)
Q Consensus 556 dG~~~wv~~~~spi~d~~ 573 (998)
||+.+|++++++++++..
T Consensus 77 dG~~~wve~~~~~v~~~~ 94 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRA 94 (111)
T ss_dssp TSCEEEEEEEEEEC----
T ss_pred CCCEEEEEEEEEEEeccc
Confidence 999999999999998765
No 344
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.23 E-value=5.5e-12 Score=117.90 Aligned_cols=108 Identities=11% Similarity=0.125 Sum_probs=76.4
Q ss_pred hHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEE
Q 001902 187 VSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (998)
Q Consensus 187 ~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (998)
+++.|+.++++++++|+++|. +|+|+++|+++++++||+.++++|+++..+++++...............+...
T Consensus 17 ~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 90 (125)
T 3fc7_A 17 TRKKFESLVSDSPDGIVHLTT---NGTILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT--- 90 (125)
T ss_dssp ---------CCSCCEEEEEET---TSBEEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE---
T ss_pred HHHHHHHHHhcCCCeEEEEcC---CCeEEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE---
Confidence 778999999999999999999 77899999999999999999999999887774332222222234555666543
Q ss_pred EEEEecCCC-EEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 267 LLNYKKDGT-PFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 267 ~~~~~kdG~-~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
..++|. .+|+.+++.|+.+. |...+++++++|||
T Consensus 91 ---~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 91 ---RSEDAVGGRHYHNQYIPVDSH-RKSDTFQLVSRDIT 125 (125)
T ss_dssp ---EEEEEETTEEEEEEEEESSTT-TTTTEEEEEEEECC
T ss_pred ---EeEcCCCcEEEEEEEEeEecC-CCeEEEEEEEecCC
Confidence 234454 67999999998765 66678999999997
No 345
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=99.22 E-value=2.4e-11 Score=119.69 Aligned_cols=118 Identities=17% Similarity=0.176 Sum_probs=95.6
Q ss_pred HHHHHHHHHhcCCcEEEEecCCCCCceEEccHH---HHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEE
Q 001902 188 SDIVKDALSTFQQTFVVSDATKPDYPIMYASAG---FFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYC 264 (998)
Q Consensus 188 ~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a---~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~ 264 (998)
.+.+.++|++++++|+++|. +|+|+|+|++ +++++| ..++++|+++..+.++. .......+...+++|....
T Consensus 18 ~~~l~~IL~~~~~gI~~vD~---~g~I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~ 92 (151)
T 2qkp_A 18 VEQANLILNHLPLEITFVNK---DDIFQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDK 92 (151)
T ss_dssp HHHHHHHHHHSSSEEEEEET---TSBEEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSE
T ss_pred HHHHHHHHHhCCCceEEEcC---CCeEEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccE
Confidence 46789999999999999999 7779999999 999999 56789999998776532 2233456777788888766
Q ss_pred EEEEEEecC-CCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHH
Q 001902 265 GRLLNYKKD-GTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (998)
Q Consensus 265 ~e~~~~~kd-G~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~ 312 (998)
.+++....+ | .++.++..|++|++|++.|++.+++|||+.++++++
T Consensus 93 ~~~~~~~~~~~--~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~le~~ 139 (151)
T 2qkp_A 93 VNMWFQSERLG--KFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFELDSE 139 (151)
T ss_dssp EEEEEEETTTT--EEEEEEEEEEECTTCCEEEEEEEEEECGGGGGGGGC
T ss_pred EEEEEecCCCC--eEEEEEEEEEECCCCCEEEEEEEEEECHHHHhhhhh
Confidence 666653332 4 456788999999999999999999999999988776
No 346
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.21 E-value=1.4e-11 Score=115.33 Aligned_cols=105 Identities=14% Similarity=0.085 Sum_probs=86.9
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.++++++++|+++|.+|+ |+++|+++++++||+.++++|+++..+.++.........+.+.+..+.....++...
T Consensus 14 ~~~il~~~~~~i~~~D~~g~---i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (118)
T 3fg8_A 14 RENLYFQGGLGFMALDEDLR---IIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQTRVDSL 90 (118)
T ss_dssp CCCSSSCTTCEEEEECTTCB---EEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEEEEECS
T ss_pred HHHHHhhCCceEEEECCCCe---EEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEEEEEEE
Confidence 45689999999999999777 999999999999999999999998888877666667778888888888877644333
Q ss_pred ecCCcEEEEEEEEeeeccCCEEEEEEecCCcc
Q 001902 554 TKSGKKFWNLFHLQPMRDQKYFIGVQLDGSEH 585 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~~~vgi~rDITer 585 (998)
..+| .|+.+++.|+.+ +++++++|||+|
T Consensus 91 ~~~g--~~~~~~~~p~~~--g~v~~~~DITer 118 (118)
T 3fg8_A 91 YSPG--MTIEVTAAADSG--ALVVHFRDVTAE 118 (118)
T ss_dssp SSTT--CEEEEEEEEETT--EEEEEEEECSCC
T ss_pred cCCC--eEEEEEEEEcCC--cEEEEEEeccCC
Confidence 3466 477888888754 589999999987
No 347
>3fc7_A HTR-like protein, sensor protein; APC87712.1, HTR-like protein,haloarcula marismortui ATCC 430 structural genomics, PSI-2; 2.65A {Haloarcula marismortui}
Probab=99.19 E-value=1.8e-11 Score=114.39 Aligned_cols=101 Identities=12% Similarity=0.108 Sum_probs=75.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|+.++++++++|+++|.+|+ |+++|++|++++||+.++++|+++..+.+++...............+... .
T Consensus 21 ~~~i~~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 91 (125)
T 3fc7_A 21 FESLVSDSPDGIVHLTTNGT---ILSVNPSMAGRLGADPDTLVGQQLSAVMDSEAANQRLEAGKSAVENGTAT------R 91 (125)
T ss_dssp -----CCSCCEEEEEETTSB---EEEECHHHHHHHTSCHHHHTTSBGGGSSCHHHHHHHHHHHHHHHHHTSCE------E
T ss_pred HHHHHhcCCCeEEEEcCCCe---EEEECHHHHHHhCCCHHHHcCccHHHhCCHHHHHHHHHHHHHHhcCCCeE------E
Confidence 78999999999999999887 99999999999999999999999887774332222323334555556543 3
Q ss_pred ecCCc-EEEEEEEEeeeccCC---EEEEEEecCC
Q 001902 554 TKSGK-KFWNLFHLQPMRDQK---YFIGVQLDGS 583 (998)
Q Consensus 554 rkdG~-~~wv~~~~spi~d~~---~~vgi~rDIT 583 (998)
.++|. .+|+.++++|+.+++ +++++++|||
T Consensus 92 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~DIT 125 (125)
T 3fc7_A 92 SEDAVGGRHYHNQYIPVDSHRKSDTFQLVSRDIT 125 (125)
T ss_dssp EEEEETTEEEEEEEEESSTTTTTTEEEEEEEECC
T ss_pred eEcCCCcEEEEEEEEeEecCCCeEEEEEEEecCC
Confidence 44566 789999999997765 8999999998
No 348
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.18 E-value=7.9e-12 Score=115.79 Aligned_cols=100 Identities=16% Similarity=0.214 Sum_probs=77.8
Q ss_pred hcCceEEEEcCC-CCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHH-Hhc-CCc---EEEEEEEE
Q 001902 480 RIEKNFVITDPR-LPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAA-IDN-QTD---VTVQLINY 553 (998)
Q Consensus 480 ~~~d~i~i~D~~-G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~-l~~-g~~---~~~e~~~~ 553 (998)
+.+++|+++|.+ |+ |+++|++|++||||+++|++|+++..+.++..... ...+... +.. +.. ...+...+
T Consensus 6 ~~~~~i~~~d~~~g~---I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDAKTTE---ILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEETTTCB---EEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEECCCCe---EEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 456899999997 77 99999999999999999999999888888764432 2222221 111 211 13456778
Q ss_pred ecCCcEEEEEEEEeeeccCC--EEEEEEecCC
Q 001902 554 TKSGKKFWNLFHLQPMRDQK--YFIGVQLDGS 583 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~--~~vgi~rDIT 583 (998)
+|||+.+|++++++|+.+++ +++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~~~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERRLCCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSSBEEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCccEEEEEEeecC
Confidence 99999999999999998875 8999999986
No 349
>4f3l_A Mclock, circadian locomoter output cycles protein kaput; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.18 E-value=2.3e-11 Score=137.80 Aligned_cols=108 Identities=11% Similarity=0.011 Sum_probs=96.9
Q ss_pred CcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEEEE
Q 001902 200 QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPFWN 279 (998)
Q Consensus 200 d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~ 279 (998)
..++..|. ||+|+|+|++++.++||+++|++|+++..++||++.......++..+..|.....++++++|||..+|+
T Consensus 252 ~f~~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~g~~~~~eyR~~~kdG~~vWv 328 (361)
T 4f3l_A 252 EFTSRHSL---EWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHVDDLENLAKCHEHLMQYGKGKSCYYRFLTKGQQWIWL 328 (361)
T ss_dssp EEEEEECT---TSBEEEECTTSHHHHCCCHHHHTTSBGGGGBCHHHHHHHHHHHHHHHHHSEEECCCEEEECTTSEEEEE
T ss_pred eeEEEEcC---CceEEEECChhhhhhCcCHHHHcCCCHHHeECHHHHHHHHHHHHHHHhCCCcceEEEEEEecCCCEEEE
Confidence 44555555 888999999999999999999999999999999887777778888888888777889999999999999
Q ss_pred EeeeeEEeCC-CCCEEEEEEEEecchhhhHHH
Q 001902 280 LLTIAPIKDD-EGKVLKFIGMQVEVSKHTEGA 310 (998)
Q Consensus 280 ~~~~spi~d~-~G~v~~~v~i~~DITerk~~E 310 (998)
+.+..|++|. .|++.+++++.+|||+++..+
T Consensus 329 ~~~~~~v~~~~~g~~~~iv~~~~dITe~~~~~ 360 (361)
T 4f3l_A 329 QTHYYITYHQWNSRPEFIVCTHTVVSYAEVRA 360 (361)
T ss_dssp EEEEEEEECTTTCCEEEEEEEEEECCHHHHHH
T ss_pred EEEEEEEEcCCCCCeeEEEEEEEECChhHhhc
Confidence 9999999998 799999999999999998765
No 350
>3fg8_A Uncharacterized protein RHA05790; PAS domain, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; HET: 3PB; 1.80A {Rhodococcus SP}
Probab=99.17 E-value=9.5e-12 Score=116.50 Aligned_cols=110 Identities=17% Similarity=0.133 Sum_probs=87.1
Q ss_pred chHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 186 RVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 186 ~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
...+.+++++++++++|+++|. +|+|+++|+++++++||+.++++|+++..++++.........+..++..+.....
T Consensus 9 ~~~~~~~~il~~~~~~i~~~D~---~g~i~~~N~a~~~l~g~~~~e~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (118)
T 3fg8_A 9 HHSSGRENLYFQGGLGFMALDE---DLRIIYVNSGCLRHVRRSRDELLGRVVTEVLPETQGSYFDALCRKVLATGREQQT 85 (118)
T ss_dssp ----CCCCSSSCTTCEEEEECT---TCBEEEECHHHHHHHTCCHHHHTTSBHHHHCGGGTTSHHHHHHHHHHHHCCCEEE
T ss_pred cccchHHHHHhhCCceEEEECC---CCeEEEECHHHHHHhCCCHHHHcCCcHHHHcCccchHHHHHHHHHHHHcCCceEE
Confidence 4445566789999999999998 7889999999999999999999999988887766666677788888898888777
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhh
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKH 306 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITer 306 (998)
++.....+| .|+.+++.|+.+ |++++++|||++
T Consensus 86 ~~~~~~~~g--~~~~~~~~p~~~------g~v~~~~DITer 118 (118)
T 3fg8_A 86 RVDSLYSPG--MTIEVTAAADSG------ALVVHFRDVTAE 118 (118)
T ss_dssp EEECSSSTT--CEEEEEEEEETT------EEEEEEEECSCC
T ss_pred EEEEEcCCC--eEEEEEEEEcCC------cEEEEEEeccCC
Confidence 443333466 478888889743 378899999985
No 351
>2vlg_A Sporulation kinase A; histidine kinase, two-component regulatory system, two-component signal transduction, transferase, phosphorylation, SCOD; 1.7A {Bacillus subtilis}
Probab=99.16 E-value=3.3e-11 Score=112.15 Aligned_cols=94 Identities=17% Similarity=0.104 Sum_probs=68.4
Q ss_pred HHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEec
Q 001902 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKK 272 (998)
Q Consensus 193 ~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~k 272 (998)
.++++++++|+++|. +|+|+|+|+++++++||+.+|++|+++..+++|++.......+. ..+.....++++++|
T Consensus 3 ~lle~~~d~i~v~d~---~G~i~yvn~~~~~~lGy~~~el~G~~~~~~ihp~D~~~~~~~~~---~~~~~~~~e~r~~~k 76 (111)
T 2vlg_A 3 FPLQTKTDIHAVLAS---NGRIIYISANSKLHLGYLQGEMIGSFLKTFLHEEDQFLVESYFY---NEHHLMPCTFRFIKK 76 (111)
T ss_dssp ------CCEEEEECT---TSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHH---CSCCSSCEEEEEECT
T ss_pred chhhcCCCEEEEEcC---CCeEEEEChHHHHHhCCCHHHHcCCcHHHeECHhHHHHHHHHHh---ccCCCccEEEEEEcC
Confidence 478999999999998 78899999999999999999999999988888877554433321 223334567888999
Q ss_pred CCCEEEEEeeeeEEeCCCCC
Q 001902 273 DGTPFWNLLTIAPIKDDEGK 292 (998)
Q Consensus 273 dG~~~w~~~~~spi~d~~G~ 292 (998)
||+.+|++++++++.+..+.
T Consensus 77 dG~~~wve~~~~~v~~~~~~ 96 (111)
T 2vlg_A 77 DHTIVWVEAAVEIVTTRAER 96 (111)
T ss_dssp TSCEEEEEEEEEEC------
T ss_pred CCCEEEEEEEEEEEecccCC
Confidence 99999999999999887553
No 352
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.16 E-value=1.1e-10 Score=107.93 Aligned_cols=107 Identities=21% Similarity=0.254 Sum_probs=84.5
Q ss_pred HHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE-EEEEE
Q 001902 190 IVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY-CGRLL 268 (998)
Q Consensus 190 ~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~-~~e~~ 268 (998)
+...+++++++||+++|. +|+|+++|+++++++||+.++++|+++..++++... ....+..++..+... ..+..
T Consensus 8 l~~~il~~~~~~i~~~D~---~g~I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 82 (115)
T 3b33_A 8 LPSAILNNMVTATLILDD---GLAIRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVT 82 (115)
T ss_dssp HHHHHHHHCSSEEEEECT---TCBEEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEE
T ss_pred cHHHHHhhcCceEEEECC---CCcEEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceE
Confidence 455699999999999999 777999999999999999999999998766553221 123445566666653 35566
Q ss_pred EEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 269 NYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 269 ~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
.. ++|..+|+.++++|+.+ +|. .+++.+++||+
T Consensus 83 ~~-~~g~~~~~~~~~~pi~~-~g~-~~~l~~~~Di~ 115 (115)
T 3b33_A 83 FV-VDGRPLMLEVTVSPITW-QRQ-LMLLVEMRKID 115 (115)
T ss_dssp EE-ETTEEEEEEEEEEEEEE-TTE-EEEEEEEEEC-
T ss_pred Ee-cCCCEEEEEEEEEEeec-CCc-eEEEEEEEeCC
Confidence 55 88999999999999998 775 68899999985
No 353
>3b33_A Sensor protein; structural genomics, PAS domain, nitrogen regulation protein APC91440.4, PSI-2; HET: MSE; 1.83A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.10 E-value=2.8e-10 Score=105.06 Aligned_cols=104 Identities=13% Similarity=0.101 Sum_probs=82.2
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc-EEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD-VTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~-~~~e~~~ 552 (998)
...+++++++||+++|.+|+ |+++|+++++++||+.++++|+++..+.++... ....+.+.+..+.. ...+...
T Consensus 9 ~~~il~~~~~~i~~~D~~g~---I~~~N~aa~~l~g~~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 83 (115)
T 3b33_A 9 PSAILNNMVTATLILDDGLA---IRYANPAAELLFSQSAKRIVEQSLSQLIQHASL--DLALLTQPLQSGQSITDSDVTF 83 (115)
T ss_dssp HHHHHHHCSSEEEEECTTCB---EEEECHHHHHHTTSCHHHHTTCBHHHHCSEEEC--CTHHHHHHHHHCCCEEEEEEEE
T ss_pred HHHHHhhcCceEEEECCCCc---EEEECHHHHHHhCCCHHHHhCCCHHHHhCccch--hhHHHHHHHHcCCcccCCceEE
Confidence 46699999999999999888 999999999999999999999997766554321 12334555666655 3456666
Q ss_pred EecCCcEEEEEEEEeeeccCC--EEEEEEecCC
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK--YFIGVQLDGS 583 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~--~~vgi~rDIT 583 (998)
. ++|+.+|+.++++|+.+++ +++.+++||+
T Consensus 84 ~-~~g~~~~~~~~~~pi~~~g~~~~l~~~~Di~ 115 (115)
T 3b33_A 84 V-VDGRPLMLEVTVSPITWQRQLMLLVEMRKID 115 (115)
T ss_dssp E-ETTEEEEEEEEEEEEEETTEEEEEEEEEEC-
T ss_pred e-cCCCEEEEEEEEEEeecCCceEEEEEEEeCC
Confidence 5 8999999999999998854 7999999985
No 354
>4f3l_B BMAL1B; BHLH, PAS, circadian rhythm proteins, transcription-activato; 2.27A {Mus musculus}
Probab=99.09 E-value=9.6e-11 Score=133.83 Aligned_cols=108 Identities=12% Similarity=0.025 Sum_probs=90.7
Q ss_pred cCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc-EEEEEEEEecCCCE
Q 001902 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YCGRLLNYKKDGTP 276 (998)
Q Consensus 198 ~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-~~~e~~~~~kdG~~ 276 (998)
..+.++..|. ||+|+|+|++++.++||+++|++|+++..++||++.......+...+..++. ...++++++|||..
T Consensus 277 ~~~fi~~~~~---dg~~~~vn~~~~~ilGY~~eEl~g~~~~~~iHpdD~~~~~~~~~~~l~~~~~~~~~eyR~~~kdG~~ 353 (387)
T 4f3l_B 277 SMEYVSRHAI---DGKFVFVDQRATAILAYLPQELLGTSCYEYFHQDDIGHLAECHRQVLQTREKITTNCYKFKIKDGSF 353 (387)
T ss_dssp CCEEEEEECT---TSBEEEECTHHHHHHCCCHHHHTTSBGGGTBCHHHHHHHHHHHHHHTTCSSCEECCCEEEECTTSCE
T ss_pred CceEEEEECC---CCEEEEECCCcccccCCCHHHHcCCcHHHeeCHHHHHHHHHHHHHHHhcCCCeeeEEEEEEccCCCE
Confidence 4556666776 8889999999999999999999999999999988877777777777766554 55799999999999
Q ss_pred EEEEeeeeEEeCC-CCCEEEEEEEEecchhhhH
Q 001902 277 FWNLLTIAPIKDD-EGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 277 ~w~~~~~spi~d~-~G~v~~~v~i~~DITerk~ 308 (998)
+|++.+..+++|. .|++.+++|+.+|||+||+
T Consensus 354 vWv~~~~~~~~~~~~g~~~~ivg~~~dIT~Rk~ 386 (387)
T 4f3l_B 354 ITLRSRWFSFMNPWTKEVEYIVSTNTVVLANVL 386 (387)
T ss_dssp EEEEEEEEEEEETTTTEEEEEEEEEEECC----
T ss_pred EEEEEEEEEEECCCCCCEEEEEEEEEEcchhhc
Confidence 9999999999987 7889999999999999984
No 355
>1ll8_A PAS kinase; PAS domain, ligand binding, ligand screening, kinase regulation, transferase; NMR {Homo sapiens} SCOP: d.110.3.5
Probab=99.06 E-value=5.6e-11 Score=109.99 Aligned_cols=102 Identities=15% Similarity=0.233 Sum_probs=75.8
Q ss_pred hcCCcEEEEecCCCC-CceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHH-HHc-CCc---EEEEEEEE
Q 001902 197 TFQQTFVVSDATKPD-YPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRET-LQN-GQS---YCGRLLNY 270 (998)
Q Consensus 197 ~~~d~i~i~D~~g~d-G~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~-l~~-g~~---~~~e~~~~ 270 (998)
+.+++|+++|. + |+|+++|+++++++||+.+|++|+++..++++..... ...+... +.. +.. ...++..+
T Consensus 6 ~~~~~i~~~d~---~~g~I~~~N~aa~~l~G~~~~el~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (114)
T 1ll8_A 6 EFNKAIFTVDA---KTTEILVANDKACGLLGYSSQDLIGQKLTQFFLRSDSDV-VEALSEEHMEADGHAAVVFGTVVDII 81 (114)
T ss_dssp TTTCEEEEEET---TTCBEEEECTTHHHHHTCCTTTTTTSBGGGGSSCTTTHH-HHHTTSSTTSSSSCSSCCCSSSEEEC
T ss_pred CCCceEEEEEC---CCCeEEEehHHHHHHhCCCHHHHcCCCHHHhcCcchhHH-HHHHHHHhhccCCcceeccCcEEEEE
Confidence 34579999998 6 7799999999999999999999999998887754332 2222221 111 111 12346678
Q ss_pred ecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 271 KKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 271 ~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
++||+.+|+.++++|+.+.++ .+++++++|++
T Consensus 82 ~~dG~~~~v~~~~~~~~~~~~--~~~v~~~~~~~ 113 (114)
T 1ll8_A 82 SRSGEKIPVSVWMKRMRQERR--LCCVVVLEPVE 113 (114)
T ss_dssp CTTCCCEEEECCEECCBSSSS--BEEEEEEEECC
T ss_pred ecCCCEEEEEEEEEeeccCCc--cEEEEEEeecC
Confidence 999999999999999987554 36789999986
No 356
>4hi4_A Aerotaxis transducer AER2; PAS domain, diatomic GAS sensor, signaling protein; HET: HEM GOL; 2.30A {Pseudomonas aeruginosa}
Probab=99.06 E-value=7.6e-10 Score=103.96 Aligned_cols=99 Identities=20% Similarity=0.310 Sum_probs=73.2
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcC------------CChhhhcCCCCccccCCCCCHHHHHHHHHHHh
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE------------YSREEILGRNCRFLQGPETDPATVRKIRAAID 541 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~G------------y~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~ 541 (998)
|+++++++++||+++|.+|+ |+++|++|++|+| |+.++++|++...+.+. ......+...+.
T Consensus 7 l~~il~~~~~gviv~D~~g~---I~~~N~a~~~llg~~~~~i~~~~~g~~~~~~~G~~~~~~~~~---~~~~~~~~~~~~ 80 (121)
T 4hi4_A 7 IASALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANLT 80 (121)
T ss_dssp HHHHHTTSSSEEEEEETTCB---EEEECHHHHHHHHHTHHHHHHHCTTCCGGGCTTCBGGGGCSS---HHHHHHHHHHCS
T ss_pred HHHHHhcCCccEEEEcCCCe---EEEecHHHHHHHHHHHHHHHHhcCCCChHHhcCCCHHHhcCC---HHHHHHHHhCcC
Confidence 78999999999999999888 9999999999995 99999999998776642 222333333332
Q ss_pred cCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcc
Q 001902 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEH 585 (998)
Q Consensus 542 ~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITer 585 (998)
..+..++. .+|. ++.++++|+.+.+ +++++++|||++
T Consensus 81 --~~~~~~~~---~~~~--~~~~~~~pi~~~~g~~~g~v~~~~DiTee 121 (121)
T 4hi4_A 81 --GVHKAELN---LGGR--RFSLDVVPVFNDANARLGSAVQWTDRTEE 121 (121)
T ss_dssp --SCEEEEEE---ETTE--EEEEEEEEEECTTSCEEEEEEEEEECC--
T ss_pred --CCcEEEEE---ECCE--EEEEEEEEEECCCCCEEEEEEEEEEecCC
Confidence 23443332 3555 4577899999754 899999999985
No 357
>3vol_A Aerotaxis transducer AER2; heme, oxygen sensor protein, PAS, HAMP, cyanoMet, CN-bound, protein; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=99.05 E-value=4.8e-10 Score=118.85 Aligned_cols=101 Identities=19% Similarity=0.311 Sum_probs=79.6
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHc------------CCChhhhcCCCCccccCCCCCHHHHHHHHHHHh
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELT------------EYSREEILGRNCRFLQGPETDPATVRKIRAAID 541 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~------------Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~ 541 (998)
++.++++++++|+++|.+|+ |+|+|++|++++ ||++++++|+++..+.+. ......++..+.
T Consensus 24 l~~iLd~~~~~vii~D~~g~---I~~~N~a~~~ll~~~~~~~~~~l~G~~~~eliG~~~~~~~~~---~~~~~~~~~~~~ 97 (233)
T 3vol_A 24 IKSALDNVSANVMIADNDLN---IIYMNRTVSEMLGRAEADIRKQLPNFDAGRLMGANIDVFHKN---PAHQRHLLANLT 97 (233)
T ss_dssp HHHHHTTSSSEEEEEETTSB---EEEECHHHHHHHHHTHHHHHTTCTTCCTTSCTTCBGGGGSSS---HHHHHHHHHTCC
T ss_pred HHHHHhcCCCcEEEECCCCc---EEEecHHHHHHHHHHHHHHHhhcCCCCHHHHcCCCHHHHcCC---HHHHHHHHHhcc
Confidence 68899999999999999888 999999999998 899999999998877642 333444444433
Q ss_pred cCCcEEEEEEEEecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccc
Q 001902 542 NQTDVTVQLINYTKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLE 587 (998)
Q Consensus 542 ~g~~~~~e~~~~rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~ 587 (998)
. .+..++ +.+|. |+.++++|+.|++ +++++++|||++++
T Consensus 98 ~--~~~~~~---~~~g~--~~~~~~~Pi~d~~G~~~g~v~~~~DITe~~~ 140 (233)
T 3vol_A 98 G--VHKAEL---NLGGR--RFSLDVVPVFNDANERLGSAVQWTDRTEEHR 140 (233)
T ss_dssp S--CEEEEE---EETTE--EEEEEEEEEECTTCCEEEEEEEEEECHHHHH
T ss_pred c--ceeEEE---EECCE--EEEEEEEEEECCCCCEEEEEEEEehhhHHHH
Confidence 2 344443 34664 6788999999864 89999999999986
No 358
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.04 E-value=4.4e-10 Score=120.52 Aligned_cols=135 Identities=13% Similarity=0.084 Sum_probs=100.0
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC--ccceeEEEeeCCeEEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTKTHVCL 742 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~~~~~l 742 (998)
.+|.+....+.|..+.||++.. .+|..+++|+.... ....+..|..+++.+.+.+ +++++.+....+..++
T Consensus 20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~------~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~ 92 (264)
T 1nd4_A 20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG------ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWL 92 (264)
T ss_dssp TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC------TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEE
T ss_pred CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc------cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEE
Confidence 3555544444666799999964 56778999987643 1134667899998885434 5678888888888999
Q ss_pred EEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
Q 001902 743 ITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG----------------------------------- 787 (998)
Q Consensus 743 V~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~----------------------------------- 787 (998)
||||++|.+|. ... .. ...++.+++..|..||+..
T Consensus 93 v~e~i~G~~l~--~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (264)
T 1nd4_A 93 LLGEVPGQDLL--SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH 162 (264)
T ss_dssp EEECCSSEETT--TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred EEEecCCcccC--cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence 99999998884 211 12 2356677888888888643
Q ss_pred -----------------------ceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 788 -----------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 788 -----------------------IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
++|+|++|+|||++.++.+.|+|||.+..
T Consensus 163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 99999999999998776677999998743
No 359
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.00 E-value=3.1e-10 Score=127.41 Aligned_cols=130 Identities=15% Similarity=0.102 Sum_probs=91.2
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
++.++++++++|+++|.+|+ |+++|++|+++|||+++|++|+++..+.+++ .....+...+..+.....+
T Consensus 10 ~~~i~~~~~~~i~~~d~~g~---i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~---- 79 (349)
T 3a0r_A 10 SESILESLETAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDLPDFE---EIGSVAESVFENKEPVFLN---- 79 (349)
T ss_dssp CCSSGGGSSSEEEEEESSSB---CSCBCHHHHHHHSCCSTTTTTCBSTTSTTTT---HHHHHHHHHHHHCCCCEEE----
T ss_pred HHHHHhhhcCeEEEECCCCC---EEeeHHHHHHHhCCCHHHHcCcCHHHCcChh---HHHHHHHHHHhcCCceeec----
Confidence 56799999999999999887 9999999999999999999999987773322 3334455555556543322
Q ss_pred ecCCcEEEEEEEEeeeccCC-----EEEEEEecCCccccccccCcchhhhhHHHHHHHHhhhhhh
Q 001902 554 TKSGKKFWNLFHLQPMRDQK-----YFIGVQLDGSEHLEPLRNSIPEATAEESEKLVKQTAENVN 613 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~-----~~vgi~rDITerk~~~~~~~~e~~~~~~~~~~k~~~~~v~ 613 (998)
...+..+|+.++++|+.+.+ +++++++|||++|+.+++....+.++....++....|.+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~~~~~~~~~~~~~~~i~Helr 144 (349)
T 3a0r_A 80 FYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRRERLSILGEMTARVAHEIR 144 (349)
T ss_dssp CCCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 12223357888899998764 7999999999999855554444444444444444444433
No 360
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.99 E-value=1e-09 Score=124.15 Aligned_cols=142 Identities=18% Similarity=0.277 Sum_probs=106.9
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEee--cccccChhHHHHHHHHHHHHHhCC--CCCccceeEEEeeC---Ce
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMD--KGVMLNRNKVHRACAEREILDMLD--HPFVPALYASFQTK---TH 739 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~--~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~~~~~~---~~ 739 (998)
...++.|+.|.++.||++.. .+..+++|+.. ..... .....+.+|..+++.+. +..+++++.++.+. +.
T Consensus 40 ~~~~~~l~~G~sn~~y~v~~--~~~~~vlr~~~~p~~~~~--~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~ 115 (359)
T 3dxp_A 40 PLSVEQFKGGQSNPTFKLVT--PGQTYVMRAKPGPKSKLL--PSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGR 115 (359)
T ss_dssp CCEEEECCC-CCSCEEEEEC--SSCEEEEECCCC------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSS
T ss_pred CceEEEcCCcccceEEEEEE--CCceEEEEeCCCCCCCCC--CcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCC
Confidence 34567899999999999986 34688899775 33211 12346778999999996 45578888888765 45
Q ss_pred EEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------
Q 001902 740 VCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC---------------------------------- 785 (998)
Q Consensus 740 ~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~---------------------------------- 785 (998)
.|+||||++|.++.+... ..++......++.+++..|+.||+
T Consensus 116 ~~~vme~v~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (359)
T 3dxp_A 116 AFYIMEFVSGRVLWDQSL----PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSET 191 (359)
T ss_dssp CEEEEECCCCBCCCCTTC----TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCC
T ss_pred eEEEEEecCCeecCCCcc----ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCC
Confidence 899999999988854221 237788889999999999999997
Q ss_pred ------------------------CCceeccCCCCcEEEecCCc--EEEEeccCccc
Q 001902 786 ------------------------QGIIYRDLKPENVLLQGNGH--VSLTDFDLSCL 816 (998)
Q Consensus 786 ------------------------~~IiHrDLkP~NILi~~~g~--vkL~DFG~a~~ 816 (998)
..++|+|++|+|||++.++. +.|+||+.+..
T Consensus 192 ~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 192 ESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp SCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred cCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 35899999999999997753 68999998854
No 361
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.97 E-value=1.7e-10 Score=106.11 Aligned_cols=109 Identities=11% Similarity=0.153 Sum_probs=85.8
Q ss_pred cccccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCC---ChhhhcCCCCCcccCCCCChHHHHHHHHHH
Q 001902 181 EKGLPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGY---TSKEVVGRNCRFLQGAGTDPEDVAKIRETL 257 (998)
Q Consensus 181 e~~l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gy---s~eEliG~~~~~l~~~~~~~~~~~~i~~~l 257 (998)
.+++...++.++.++++++++|+++|. +|+|+++|+++++++|| +.++++|+++..+.++.. +...+
T Consensus 7 ~~~l~~~~~~~~~il~~~~~~i~~~d~---~g~i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~ 76 (118)
T 2w0n_A 7 PYEISTLFEQRQAMLQSIKEGVVAVDD---RGEVTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVL 76 (118)
T ss_dssp HHHHCTTHHHHHHHHHCCCCCCEEEBT---TTBCCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHH
T ss_pred HHHHHHHHHHHHHHHhhccccEEEECC---CCcEeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHh
Confidence 445777888999999999999999998 77799999999999998 889999999887765421 44555
Q ss_pred HcCCcEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecch
Q 001902 258 QNGQSYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVS 304 (998)
Q Consensus 258 ~~g~~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DIT 304 (998)
..+....... ...+| .|+.++..|+.+ +|++.|++++++|||
T Consensus 77 ~~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 77 RDGTPRRDEE--ITIKD--RLLLINTVPVRS-NGVIIGAISTFRDKT 118 (118)
T ss_dssp HTTCCCCCCC--EESSS--CEECCCEECCCC-SSCCCCEEECCCCCC
T ss_pred ccCceeccEE--EEECC--EEEEEeeceeee-CCEEEEEEEEEEeCC
Confidence 5555432211 23456 477888999987 788889999999997
No 362
>3a0r_A Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transfe two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.97 E-value=4.1e-10 Score=126.38 Aligned_cols=121 Identities=11% Similarity=0.112 Sum_probs=89.7
Q ss_pred ccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE
Q 001902 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (998)
Q Consensus 184 l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (998)
+++++++++.++++++++|+++|. +|+|+++|++|++++||+.++++|+++..+.++ ......+...+..+...
T Consensus 3 l~~~~~~~~~i~~~~~~~i~~~d~---~g~i~~~N~a~~~l~G~~~~e~~G~~~~~~~~~---~~~~~~~~~~~~~~~~~ 76 (349)
T 3a0r_A 3 VEHLRNFSESILESLETAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDLPDF---EEIGSVAESVFENKEPV 76 (349)
T ss_dssp ------CCCSSGGGSSSEEEEEES---SSBCSCBCHHHHHHHSCCSTTTTTCBSTTSTTT---THHHHHHHHHHHHCCCC
T ss_pred hHHHHHHHHHHHhhhcCeEEEECC---CCCEEeeHHHHHHHhCCCHHHHcCcCHHHCcCh---hHHHHHHHHHHhcCCce
Confidence 455667788899999999999999 788999999999999999999999998877332 23344455566666554
Q ss_pred EEEEEEEecCCCEEEEEeeeeEEeCCCCCE-EEEEEEEecchhhhHHHHHhh
Q 001902 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKV-LKFIGMQVEVSKHTEGAKDKM 314 (998)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~spi~d~~G~v-~~~v~i~~DITerk~~E~~l~ 314 (998)
.... ..+...|+.++++|+.+.+|.. .|++++++|||+++++|++++
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~DiTe~~~~e~~~~ 124 (349)
T 3a0r_A 77 FLNF----YKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERK 124 (349)
T ss_dssp EEEC----CCBTTBCCEEEEEEECCTTTTSSCEEEEEEECCSTTTTTTTTTT
T ss_pred eecc----cccCceEEEEEEEEEEcCCCceeeEEEEEEEechHHHHHHHHHH
Confidence 3321 2223347888999999888775 589999999999999887654
No 363
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.96 E-value=8.3e-10 Score=125.19 Aligned_cols=120 Identities=13% Similarity=0.180 Sum_probs=97.7
Q ss_pred ccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE
Q 001902 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (998)
Q Consensus 184 l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (998)
.....+.++++|+++++||+++|. +|+|+|+|++ ++++ ++.++++|+++..++++. .......+..++.+|...
T Consensus 234 g~~~~~~l~~IL~~l~dgIivvD~---~g~I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~ 307 (369)
T 3cax_A 234 GYLNIEELKAIFEALPVDVTFIDK---DDRVRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKK 307 (369)
T ss_dssp CEECHHHHHHHHHHSSSEEEEECT---TSBEEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCS
T ss_pred chhhHHHHHHHHHhCCCcEEEECC---CCcEEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCce
Confidence 345557889999999999999999 7779999999 9999 999999999998877643 233445567778888765
Q ss_pred EEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHH
Q 001902 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKD 312 (998)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~ 312 (998)
..+... .++| .++.++.+||+|.+|++.|++.+++|||+.++++++
T Consensus 308 ~~~~~~-~~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le~~ 353 (369)
T 3cax_A 308 EATFWL-RLRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIEGE 353 (369)
T ss_dssp CEEEEE-EETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCCSC
T ss_pred EEEEEE-eeCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHHHH
Confidence 555544 3456 477889999999999999999999999999987765
No 364
>2qkp_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 1.75A {Streptococcus mutans}
Probab=98.94 E-value=1.5e-09 Score=106.80 Aligned_cols=109 Identities=15% Similarity=0.121 Sum_probs=84.5
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHH---HHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDS---FLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a---~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
|..++++++++|+++|.+|+ |+|+|++ ++++|| ..++++|+++..+.++. .....+.+.+.+..|+....+.
T Consensus 21 l~~IL~~~~~gI~~vD~~g~---I~~~N~a~~~~~~i~g-~~~~~iGr~v~~~~~~~-~~~~v~~i~~~l~~g~~~~~~~ 95 (151)
T 2qkp_A 21 ANLILNHLPLEITFVNKDDI---FQYYNDSVPAAEMVFK-RTPSQVGRNVELCHPPK-VLDKVKKVFELLRNGQRDKVNM 95 (151)
T ss_dssp HHHHHHHSSSEEEEEETTSB---EEEECCCSCGGGCSSC-CCGGGTTSBGGGSSCHH-HHHHHHHHHHHHHTTSBSEEEE
T ss_pred HHHHHHhCCCceEEEcCCCe---EEEEeCCCchhhhhcC-CCHHHcCCCHHHhCCHH-HHHHHHHHHHHHHcCCccEEEE
Confidence 68899999999999999888 9999999 999999 56899999988765533 2333455677777787766666
Q ss_pred EEEecCCcEEEEEEEEeeeccC-C---EEEEEEecCCccccc
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQ-K---YFIGVQLDGSEHLEP 588 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~-~---~~vgi~rDITerk~~ 588 (998)
+....+ ...++.++..|++|+ + |++.+++|||+.++-
T Consensus 96 ~~~~~~-~~~~v~v~~~Pi~d~~G~~~G~vev~~Dit~l~~l 136 (151)
T 2qkp_A 96 WFQSER-LGKFVYVTYAAVRDQAGDFQGVLEYVQDIKPFFEL 136 (151)
T ss_dssp EEEETT-TTEEEEEEEEEEECTTCCEEEEEEEEEECGGGGGG
T ss_pred EEecCC-CCeEEEEEEEEEECCCCCEEEEEEEEEECHHHHhh
Confidence 653332 124578889999985 3 888899999998863
No 365
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.91 E-value=9.5e-09 Score=89.42 Aligned_cols=95 Identities=12% Similarity=0.051 Sum_probs=73.2
Q ss_pred cCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEEEEEEecCCCEE
Q 001902 198 FQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGRLLNYKKDGTPF 277 (998)
Q Consensus 198 ~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~ 277 (998)
++++|+++|. +|+|+++|+++++++||+.++++|+++..+ + ........+...+..+..+... . ++|...
T Consensus 1 ~~~~i~~~d~---~g~i~~~N~~~~~l~g~~~~~~~g~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSK---DGRITEWNKKAEQLFGLKKENVLGRRLKDL-P--DFEEIGSVAESVFENKEPVFLN--F--YKFGER 70 (96)
T ss_dssp CCCEEEEEET---TSBEEEECHHHHHHHCCCHHHHTTSBGGGS-T--TCHHHHHHHHHHHHHTCCEEEE--E--EEETTE
T ss_pred CCceEEEEcC---CCCEeehhHHHHHHhCCCHHHhcCCCHHHC-c--chHHHHHHHHHHhccCCeEEEE--E--EcCCcE
Confidence 4789999998 777999999999999999999999998877 2 2234455566666666665432 2 234446
Q ss_pred EEEeeeeEEeCCCCC-EEEEEEEEec
Q 001902 278 WNLLTIAPIKDDEGK-VLKFIGMQVE 302 (998)
Q Consensus 278 w~~~~~spi~d~~G~-v~~~v~i~~D 302 (998)
|+.+++.|+.+.+|+ +.|++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 899999999988665 6799999887
No 366
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.89 E-value=1.7e-09 Score=119.40 Aligned_cols=133 Identities=18% Similarity=0.175 Sum_probs=100.0
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhC-CCCC--ccceeEEEeeCC---eEEEE
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDML-DHPF--VPALYASFQTKT---HVCLI 743 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l-~h~n--Iv~l~~~~~~~~---~~~lV 743 (998)
++.++.|.++.||++. ..+++|+.... .....+..|..+++.+ .+.. +++++......+ ..|+|
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~-----~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~v 94 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS-----RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAG 94 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH-----HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc-----chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEE
Confidence 4568999999999874 45889986532 3456788899999888 4433 445555443333 35899
Q ss_pred EecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 001902 744 TDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHC-------------------------------------- 785 (998)
Q Consensus 744 ~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~-------------------------------------- 785 (998)
|+|++|.+|...... .++......++.+++..|+.||+
T Consensus 95 m~~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (304)
T 3sg8_A 95 FTKIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQM 170 (304)
T ss_dssp EECCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHH
T ss_pred EcccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccH
Confidence 999999998764332 27788888889999999999996
Q ss_pred --------------------CCceeccCCCCcEEEec--CCcEEEEeccCccc
Q 001902 786 --------------------QGIIYRDLKPENVLLQG--NGHVSLTDFDLSCL 816 (998)
Q Consensus 786 --------------------~~IiHrDLkP~NILi~~--~g~vkL~DFG~a~~ 816 (998)
..++|+|++|.||+++. ++.+.|+||+.+..
T Consensus 171 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 171 KKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 13699999999999998 45688999998854
No 367
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.37 E-value=2.6e-10 Score=125.66 Aligned_cols=104 Identities=14% Similarity=0.070 Sum_probs=72.1
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcC---CChhhhcCCCCccccCCC---CCH--HHHHHHHHHHhc-CCc
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTE---YSREEILGRNCRFLQGPE---TDP--ATVRKIRAAIDN-QTD 545 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~G---y~~eEliG~~~~~l~~p~---~~~--~~~~~i~~~l~~-g~~ 545 (998)
+.+++++++||+++|.+|+ |+++|++++++|| ++ ++++|+++..+.+.. ... .....+...+.+ +..
T Consensus 173 ~~~~~~~~dGIivvD~~G~---Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~ 248 (305)
T 2ykf_A 173 SRSSPRAGDGFIRLDVDGV---VSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKG 248 (305)
Confidence 4478999999999999888 9999999999984 55 789999987776543 100 122222224443 333
Q ss_pred EEEEEEEEecCCcEEEEEEEEeeeccCC---EEEEEEecCCcccc
Q 001902 546 VTVQLINYTKSGKKFWNLFHLQPMRDQK---YFIGVQLDGSEHLE 587 (998)
Q Consensus 546 ~~~e~~~~rkdG~~~wv~~~~spi~d~~---~~vgi~rDITerk~ 587 (998)
...+.. .+| .++.++..|+.+++ +++.+++|||++++
T Consensus 249 ~~~ei~---~~~--~~l~v~~~Pi~~~g~~~G~Vvv~rDITE~~~ 288 (305)
T 2ykf_A 249 MRMEVD---AGG--ATVLLRTLPLVVAGRNVGAAILIRDVTEVKR 288 (305)
Confidence 322221 123 46677889998766 78899999999996
No 368
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.84 E-value=2.2e-08 Score=93.84 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=79.0
Q ss_pred HHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCc-ccCCCCChHHHHHHHHHHHcCCcEEEEEEE-
Q 001902 192 KDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN- 269 (998)
Q Consensus 192 ~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~- 269 (998)
..++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.+..|. ...++.+
T Consensus 20 ~~~ld~l~~Gii~lD~---~g~I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDG---DGNILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECC---CCEEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 4579999999999999 88899999999999999999999999975 4444556677788888888776 4444444
Q ss_pred EecCCCEEEEEeeeeEEeCCCCCEEEEE
Q 001902 270 YKKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (998)
Q Consensus 270 ~~kdG~~~w~~~~~spi~d~~G~v~~~v 297 (998)
.+++|..++ ++++...+.+|+..++.
T Consensus 96 ~~~~~~p~~--v~i~l~~~~~~~~~~i~ 121 (125)
T 1nwz_A 96 FDYQMTPTK--VKVHMKKALSGDSYWVF 121 (125)
T ss_dssp ECTTSCCEE--EEEEEEECSSSSEEEEE
T ss_pred EcCCCCEEE--EEEEEEEcCCCCEEEEE
Confidence 499999554 55666677888776543
No 369
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.81 E-value=2.7e-08 Score=93.39 Aligned_cols=99 Identities=12% Similarity=0.101 Sum_probs=78.2
Q ss_pred HHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCc-ccCCCCChHHHHHHHHHHHcCCcEEEEEEE-E
Q 001902 193 DALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRF-LQGAGTDPEDVAKIRETLQNGQSYCGRLLN-Y 270 (998)
Q Consensus 193 ~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~-l~~~~~~~~~~~~i~~~l~~g~~~~~e~~~-~ 270 (998)
+++++++.|++++|. +|+|++||+++++++||++++++|+++.. +.+......+...+.+.+..|. ...++.+ .
T Consensus 26 ~~ld~l~~GiivlD~---dg~I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv~ 101 (129)
T 1mzu_A 26 AEFDALPVGAIQVDG---SGVIHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFVF 101 (129)
T ss_dssp TTGGGCSSEEEEEET---TCBEEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEEE
T ss_pred HHHhccCceEEEECC---CCeEEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEEE
Confidence 369999999999999 78899999999999999999999999975 4444556677888888888766 4444444 4
Q ss_pred ecCCCEEEEEeeeeEEeCCCCCEEEEE
Q 001902 271 KKDGTPFWNLLTIAPIKDDEGKVLKFI 297 (998)
Q Consensus 271 ~kdG~~~w~~~~~spi~d~~G~v~~~v 297 (998)
+++|..+ .++++...+.+|+..++.
T Consensus 102 ~~~~~p~--~v~i~l~~~~~~~~~~i~ 126 (129)
T 1mzu_A 102 DFQMAPV--RVQIRMQNAGVPDRYWIF 126 (129)
T ss_dssp ECSSCEE--EEEEEEEECSSTTEEEEE
T ss_pred cCCCCEE--EEEEEEEEcCCCCEEEEE
Confidence 9999955 455666677888876543
No 370
>1nwz_A PYP, photoactive yellow protein; PAS, LOV, GAF, domains fold, signaling protein; HET: HC4; 0.82A {Halorhodospira halophila} SCOP: d.110.3.1 PDB: 1kou_A* 1ot9_A* 1otb_A* 1s4r_A* 1s4s_A* 1ts0_A* 1ts6_A* 1ts7_A* 1ts8_A* 1uwn_X* 1uwp_X* 2d01_A* 2phy_A* 2pyp_A* 2pyr_A* 2qj5_A* 2qj7_A* 2qws_A* 2zoh_A* 2zoi_A* ...
Probab=98.81 E-value=2.8e-08 Score=93.09 Aligned_cols=95 Identities=9% Similarity=0.050 Sum_probs=75.7
Q ss_pred HHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCcccc-CCCCCHHHHHHHHHHHhcCCcEEEEEEE-
Q 001902 475 ATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN- 552 (998)
Q Consensus 475 ~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~-~p~~~~~~~~~i~~~l~~g~~~~~e~~~- 552 (998)
..+++++++||+++|.+|+ |++||.++++++||+++|++|+++.... +......+...+.+.+..|. ...+..+
T Consensus 20 ~~~ld~l~~Gii~lD~~g~---I~~~N~~~e~~sG~~~~eviGk~~f~~~~~~~~~~~f~~rf~~~~~~g~-l~~~~~~v 95 (125)
T 1nwz_A 20 DGQLDGLAFGAIQLDGDGN---ILQYNAAEGDITGRDPKQVIGKNFFKDVAPCTDSPEFYGKFKEGVASGN-LNTMFEYT 95 (125)
T ss_dssp HHHHTTCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHHTC-CEEEEEEE
T ss_pred HHHHhccCceEEEECCCCE---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEE
Confidence 5689999999999999888 9999999999999999999999986644 44566667788888888776 5555555
Q ss_pred EecCCcEEEEEEEEeeeccCC
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK 573 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~ 573 (998)
.+++|+.+++.+++....+.+
T Consensus 96 ~~~~~~p~~v~i~l~~~~~~~ 116 (125)
T 1nwz_A 96 FDYQMTPTKVKVHMKKALSGD 116 (125)
T ss_dssp ECTTSCCEEEEEEEEECSSSS
T ss_pred EcCCCCEEEEEEEEEEcCCCC
Confidence 499999777766655554443
No 371
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.78 E-value=5.8e-09 Score=106.14 Aligned_cols=108 Identities=12% Similarity=0.092 Sum_probs=82.3
Q ss_pred cchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC--c
Q 001902 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ--S 262 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~--~ 262 (998)
++....++.+++++++||+++|. +|+|+++|+++++++|++.++++|+++..+.++.. +...+..+. .
T Consensus 76 ~~~~~~l~~il~~~~~gvi~~D~---~g~I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~ 145 (190)
T 2jhe_A 76 EREHLALSALLEALPEPVLSVDM---KSKVDMANPASCQLFGQKLDRLRNHTAAQLINGFN-------FLRWLESEPQDS 145 (190)
T ss_dssp THHHHHHHHHHHHCSSCEEEECT---TCBEEEECHHHHHHHTSCHHHHTTSBGGGTSTTCC-------HHHHHHTCCCSC
T ss_pred HHHHHHHHHHHHhCCCcEEEEcC---CCCEEEEcHHHHHHhCCCHHHhcCccHHHHhCCCC-------HHHHHhcCCCCC
Confidence 45567899999999999999999 77799999999999999999999999987776542 123344443 2
Q ss_pred EEEEEEEEecCCCEEEEEeeeeEEeCCCCC----EEEEEEEEecchhhh
Q 001902 263 YCGRLLNYKKDGTPFWNLLTIAPIKDDEGK----VLKFIGMQVEVSKHT 307 (998)
Q Consensus 263 ~~~e~~~~~kdG~~~w~~~~~spi~d~~G~----v~~~v~i~~DITerk 307 (998)
...++.. +|. ++.++++|+.+.+|+ +.|++++++|||+++
T Consensus 146 ~~~~~~~---~g~--~~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~ 189 (190)
T 2jhe_A 146 HNEHVVI---NGQ--NFLMEITPVYLQDENDQHVLTGAVVMLRSTIRMG 189 (190)
T ss_dssp EEEEEEE---TTE--EEEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTC
T ss_pred cceEEEE---CCe--EEEEEEEEEEecCCCCcceEEeEEEEEeccchhc
Confidence 3333332 775 456778999875555 788889999999876
No 372
>1mzu_A PPR; photoactive yellow protein, PAS, PYP, signaling protein; HET: HC4; 2.00A {Rhodospirillum centenum} SCOP: d.110.3.1
Probab=98.77 E-value=4e-08 Score=92.23 Aligned_cols=94 Identities=12% Similarity=0.027 Sum_probs=74.5
Q ss_pred HHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCcccc-CCCCCHHHHHHHHHHHhcCCcEEEEEEE-E
Q 001902 476 TTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQ-GPETDPATVRKIRAAIDNQTDVTVQLIN-Y 553 (998)
Q Consensus 476 ~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~-~p~~~~~~~~~i~~~l~~g~~~~~e~~~-~ 553 (998)
.+++++++||+++|.+|+ |++||.++++++||+++|++|+++.... +......+...+.+.+..|. ...+..+ .
T Consensus 26 ~~ld~l~~GiivlD~dg~---I~~~N~~~e~isG~s~eeviGk~~f~~~~p~~~~~~f~grf~~~~~~G~-l~~~~~yv~ 101 (129)
T 1mzu_A 26 AEFDALPVGAIQVDGSGV---IHRYNRTESRLSGRIPERVIGRNFFTEVAPCTNIPAFSGRFMDGVTSGT-LDARFDFVF 101 (129)
T ss_dssp TTGGGCSSEEEEEETTCB---EEEECHHHHHHHCCCHHHHTTSBCCCCCCGGGCSTTTHHHHHHHHHTSC-CEEEEEEEE
T ss_pred HHHhccCceEEEECCCCe---EEEEHHHHHHHhCCCHHHHcCCchhhhccchhcccHHHHHHHHHHhcCc-eeEEEEEEE
Confidence 369999999999999888 9999999999999999999999986644 44556667888888888776 5555555 4
Q ss_pred ecCCcEEEEEEEEeeeccCC
Q 001902 554 TKSGKKFWNLFHLQPMRDQK 573 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~ 573 (998)
+++|+.+++.+++....+.+
T Consensus 102 ~~~~~p~~v~i~l~~~~~~~ 121 (129)
T 1mzu_A 102 DFQMAPVRVQIRMQNAGVPD 121 (129)
T ss_dssp ECSSCEEEEEEEEEECSSTT
T ss_pred cCCCCEEEEEEEEEEcCCCC
Confidence 99999777766655554443
No 373
>2ykf_A Pdtas, probable sensor histidine kinase pdtas; transferase, two-component system, GAF domain, PAS domain; 2.00A {Mycobacterium tuberculosis} PDB: 2ykh_A
Probab=98.24 E-value=8.8e-10 Score=121.45 Aligned_cols=161 Identities=16% Similarity=0.111 Sum_probs=107.6
Q ss_pred ccCCCCCCCCCCCcCCCCCCCcccccc-ccccc---ccccccccchHHHHHHHH-----------------HhcCCcEEE
Q 001902 146 RTSGGDDPNGKPGTSRRNSNNSVRSSG-EMSDE---GGKEKGLPRVSDIVKDAL-----------------STFQQTFVV 204 (998)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-dit~~---~~~e~~l~~~~~~l~~il-----------------d~~~d~i~i 204 (998)
|..+ ......|+.......+.+.... |+++. +..|.+..+....|..++ +++++||++
T Consensus 107 ~~~~-v~~~~~Pi~~~g~vigvl~~~~~di~~~~~~~~~e~~~~~~~~~L~~mi~~~~~~~~~~~~~~~~~~~~~dGIiv 185 (305)
T 2ykf_A 107 QHDG-HSVEVSPVRFGDQVVAVLTRHQPELAARRRSGHLETAYRLCATDLLRMLAEGTFPDAGDVAMSRSSPRAGDGFIR 185 (305)
Confidence 3444 5556666665444445555558 99976 344555555556566555 489999999
Q ss_pred EecCCCCCceEEccHHHHHHcC---CChhhhcCCCCCcccCCC---CCh--HHHHHHHHHHHc-CCcEEEEEEEEecCCC
Q 001902 205 SDATKPDYPIMYASAGFFKMTG---YTSKEVVGRNCRFLQGAG---TDP--EDVAKIRETLQN-GQSYCGRLLNYKKDGT 275 (998)
Q Consensus 205 ~D~~g~dG~I~~vN~a~~~l~G---ys~eEliG~~~~~l~~~~---~~~--~~~~~i~~~l~~-g~~~~~e~~~~~kdG~ 275 (998)
+|. +|+|+++|+++++++| ++ ++++|+++..+.+.. ... .....+...+.+ +.....+.. .+|
T Consensus 186 vD~---~G~Ii~~N~aA~~ll~~lG~~-~~~iGk~l~el~~~~~~~~~~~~~~~~~l~~vl~~~~~~~~~ei~---~~~- 257 (305)
T 2ykf_A 186 LDV---DGVVSYASPNALSAYHRMGLT-TELEGVNLIDATRPLISDPFEAHEVDEHVQDLLAGDGKGMRMEVD---AGG- 257 (305)
Confidence 999 7779999999999985 55 789999988776543 100 112222223433 333322221 223
Q ss_pred EEEEEeeeeEEeCCCCCEEEEEEEEecchhhhHHHHHhhcCC
Q 001902 276 PFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTEGAKDKMLRP 317 (998)
Q Consensus 276 ~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~~E~~l~~~~ 317 (998)
.++.++..|+.+ +|++.|++.+++|||+.+++|++|+.+.
T Consensus 258 -~~l~v~~~Pi~~-~g~~~G~Vvv~rDITE~~~lE~eL~~K~ 297 (305)
T 2ykf_A 258 -ATVLLRTLPLVV-AGRNVGAAILIRDVTEVKRRDRALISKD 297 (305)
Confidence 466788899986 5788899999999999999999987643
No 374
>2w0n_A Sensor protein DCUS; signal transduction, two-component regulatory system, PAS, kinase, membrane, transferase, solid state cell inner membrane; NMR {Escherichia coli}
Probab=98.75 E-value=2.3e-09 Score=98.37 Aligned_cols=96 Identities=19% Similarity=0.165 Sum_probs=74.0
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCC---ChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEY---SREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQL 550 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy---~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~ 550 (998)
++.++++++++|+++|.+|+ |+++|++|++++|| +.++++|+++..+.++.. +...+..+.....+.
T Consensus 17 ~~~il~~~~~~i~~~d~~g~---i~~~N~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~ 86 (118)
T 2w0n_A 17 RQAMLQSIKEGVVAVDDRGE---VTLINDAAQELLNYRKSQDDEKLSTLSHSWSQVVD-------VSEVLRDGTPRRDEE 86 (118)
T ss_dssp HHHHHHCCCCCCEEEBTTTB---CCCBCHHHHHHHCSCTTTTTSSCCCTTCCCSCTHH-------HHHHHHTTCCCCCCC
T ss_pred HHHHHhhccccEEEECCCCc---EeehhHHHHHHhCCCccChhhhhccCcccccCchh-------HHHHhccCceeccEE
Confidence 68899999999999999887 99999999999998 889999999877765431 344555554322111
Q ss_pred EEEecCCcEEEEEEEEeeeccCC---EEEEEEecCC
Q 001902 551 INYTKSGKKFWNLFHLQPMRDQK---YFIGVQLDGS 583 (998)
Q Consensus 551 ~~~rkdG~~~wv~~~~spi~d~~---~~vgi~rDIT 583 (998)
...+| .|+.++..|+.+++ +++++++|||
T Consensus 87 --~~~~~--~~~~~~~~p~~~~g~~~g~v~~~~DiT 118 (118)
T 2w0n_A 87 --ITIKD--RLLLINTVPVRSNGVIIGAISTFRDKT 118 (118)
T ss_dssp --EESSS--CEECCCEECCCCSSCCCCEEECCCCCC
T ss_pred --EEECC--EEEEEeeceeeeCCEEEEEEEEEEeCC
Confidence 23466 46777888998755 7899999998
No 375
>3rty_A Period circadian protein; PAS domain, signalling, timeless, circadian clock protein; 2.85A {Drosophila melanogaster} PDB: 1wa9_A 3gec_A
Probab=98.75 E-value=1.8e-08 Score=112.18 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=91.0
Q ss_pred CCcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc-----EEEEEEEEecC
Q 001902 199 QQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-----YCGRLLNYKKD 273 (998)
Q Consensus 199 ~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-----~~~e~~~~~kd 273 (998)
.+.++..+. ||+|+|+|+++..++||+++|++|+++..++||++.......++..+..|.. ...+++++++|
T Consensus 154 ~~fi~r~~~---dG~~~yvn~~~~~lLGY~peELiG~s~~~~vHPdD~~~~~~~~~~~l~~G~~~~~~~~s~~yR~~~kd 230 (339)
T 3rty_A 154 PKFAIRHTA---TGIISHVDSAAVSALGYLPQDLIGRSIMDFYHHEDLSVMKETYETVMKKGQTAGASFCSKPYRFLIQN 230 (339)
T ss_dssp CEEEEEEET---TCBEEEECTTHHHHHCCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHHHHTTSTTCCCBCCCEEEECTT
T ss_pred ceEEEEECC---CCeEEEcChhhhcccCCCHHHHcCCcHHHEECHHHHHHHHHHHHHHHHcCCcccccccceEEEEEccC
Confidence 456677777 8889999999999999999999999999999999887777778888877764 35789999999
Q ss_pred CCEEEEEeeeeEEeCCC-CCEEEEEEEEecchhhh
Q 001902 274 GTPFWNLLTIAPIKDDE-GKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 274 G~~~w~~~~~spi~d~~-G~v~~~v~i~~DITerk 307 (998)
|..+|++.+.++++|.. +.+.++|++.+.|+...
T Consensus 231 G~~vWlet~~~~~~np~s~~~~~II~~h~vi~~p~ 265 (339)
T 3rty_A 231 GCYVLLETEWTSFVNPWSRKLEFVVGHHRVFQGPK 265 (339)
T ss_dssp SCEEEEEEEEEEEECTTTCSEEEEEEEEEEEECCS
T ss_pred CCEEEEEEEEEEEECCCCCCeeEEEEEEEECCCCC
Confidence 99999999999999865 56778889988887764
No 376
>3a0s_A Sensor protein; PAS-fold, kinase, phosphoprotein, transferase, two-component regulatory system; HET: PG4 PGE; 1.47A {Thermotoga maritima} PDB: 3a0v_A*
Probab=98.74 E-value=4.6e-08 Score=84.97 Aligned_cols=91 Identities=18% Similarity=0.132 Sum_probs=68.6
Q ss_pred cCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEEecCCcEE
Q 001902 481 IEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINYTKSGKKF 560 (998)
Q Consensus 481 ~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~rkdG~~~ 560 (998)
++++|+++|.+|+ |+++|+++++++||+.++++|++...+ +. .......+...+..+..+.. . .++|..+
T Consensus 1 ~~~~i~~~d~~g~---i~~~N~~~~~l~g~~~~~~~g~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~ 70 (96)
T 3a0s_A 1 METAIITLSKDGR---ITEWNKKAEQLFGLKKENVLGRRLKDL--PD-FEEIGSVAESVFENKEPVFL--N--FYKFGER 70 (96)
T ss_dssp CCCEEEEEETTSB---EEEECHHHHHHHCCCHHHHTTSBGGGS--TT-CHHHHHHHHHHHHHTCCEEE--E--EEEETTE
T ss_pred CCceEEEEcCCCC---EeehhHHHHHHhCCCHHHhcCCCHHHC--cc-hHHHHHHHHHHhccCCeEEE--E--EEcCCcE
Confidence 4689999999887 999999999999999999999998777 33 33444556666666665432 2 2244556
Q ss_pred EEEEEEeeeccCC-----EEEEEEec
Q 001902 561 WNLFHLQPMRDQK-----YFIGVQLD 581 (998)
Q Consensus 561 wv~~~~spi~d~~-----~~vgi~rD 581 (998)
|+.++++|+.+.+ +++++++|
T Consensus 71 ~~~~~~~p~~~~~~~~~~g~v~~~~D 96 (96)
T 3a0s_A 71 YFNIRFSPFRNAKTQLLEGVIITIDD 96 (96)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEEEEC
T ss_pred EEEEEEEEeEcCCCCeeeEEEEEecC
Confidence 8999999998752 67777776
No 377
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.65 E-value=1.1e-07 Score=105.71 Aligned_cols=133 Identities=19% Similarity=0.255 Sum_probs=101.5
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC----CCccceeEEEeeCCeEE
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH----PFVPALYASFQTKTHVC 741 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h----~nIv~l~~~~~~~~~~~ 741 (998)
.+..++.++.|..+.||++ +..+++|+.... .....+..|..+++.+.+ ..|++++.+ +..|
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~-----~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~ 103 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD-----SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRF 103 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH-----HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSC
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH-----HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcE
Confidence 3455678999999999998 567899976532 223557889999998865 234566554 5568
Q ss_pred EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------------------------
Q 001902 742 LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQG---------------------------------- 787 (998)
Q Consensus 742 lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~---------------------------------- 787 (998)
+||||++|.++...... .++......++.+++..|..||+..
T Consensus 104 lvme~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (320)
T 3r70_A 104 NIMKYIKGERITYEQYH----KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQ 179 (320)
T ss_dssp EEEECCCCBCCCHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeecCCccccccccc----cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcc
Confidence 99999999998743322 2677778888889999999888532
Q ss_pred -----------------------------ceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 788 -----------------------------IIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 788 -----------------------------IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
++|+|++|.|||++.++.+.|+||+.+..
T Consensus 180 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 180 LLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp CCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 39999999999999866679999999854
No 378
>3cax_A Uncharacterized protein PF0695; structural genomics, unknown function, PSI-2, protein struct initiative; 2.43A {Pyrococcus furiosus dsm 3638}
Probab=98.65 E-value=3.7e-08 Score=111.61 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=85.3
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLINY 553 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~~ 553 (998)
|..+++++++||+++|.+|+ |+++|++ +++| ++.++++|+++..+.++. .......+...+.+|.....+.+..
T Consensus 241 l~~IL~~l~dgIivvD~~g~---I~~~N~a-e~i~-~~~~e~iGr~v~~~~p~~-~~~~~~~l~~~l~~g~~~~~~~~~~ 314 (369)
T 3cax_A 241 LKAIFEALPVDVTFIDKDDR---VRFFSPG-ERIF-TRTPSVLGRPVQLCHPPK-SVYVVNKILKAFKEGRKKEATFWLR 314 (369)
T ss_dssp HHHHHHHSSSEEEEECTTSB---EEEECCS-SCSS-CCCGGGTTCBTTTSSCGG-GHHHHHHHHHHHHHTSCSCEEEEEE
T ss_pred HHHHHHhCCCcEEEECCCCc---EEEEcCH-HHcc-CChHHHcCCcHHHHCChh-hHHHHHHHHHHHHcCCceEEEEEEe
Confidence 68899999999999999888 9999999 9999 999999999988776643 3333455667777776654555443
Q ss_pred ecCCcEEEEEEEEeeeccCC----EEEEEEecCCcccccc
Q 001902 554 TKSGKKFWNLFHLQPMRDQK----YFIGVQLDGSEHLEPL 589 (998)
Q Consensus 554 rkdG~~~wv~~~~spi~d~~----~~vgi~rDITerk~~~ 589 (998)
++| .++.++.+|++|.+ |++.+++|||+.++.+
T Consensus 315 -~~g--~~v~v~~~PI~d~~G~~~G~v~v~~DITe~~~le 351 (369)
T 3cax_A 315 -LRE--KYVYIKYVPLFNEKGEYIGTLEMTMDIAPYKKIE 351 (369)
T ss_dssp -ETT--EEEEEEEEEEECTTSCEEEEEEEEEECHHHHTCC
T ss_pred -eCC--EEEEEEEEEEECCCCCEEEEEEEEEcCHHHHHHH
Confidence 466 47888999999754 8899999999998643
No 379
>4dj3_A Period circadian protein homolog 3; PAS domain, circadian rhythm, protein binding; 2.50A {Mus musculus}
Probab=98.57 E-value=1.9e-07 Score=102.83 Aligned_cols=97 Identities=13% Similarity=0.109 Sum_probs=82.7
Q ss_pred CCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc---EEEEEEEEecCCCEEEEEeeeeEE
Q 001902 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKKDGTPFWNLLTIAPI 286 (998)
Q Consensus 210 ~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~kdG~~~w~~~~~spi 286 (998)
.||+|+|+|+++..++||+++|++|+++..++||++.....+.+...+..++. ...++++++|||..+|++...+++
T Consensus 182 ~dG~~~yvs~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~~~~~f~s~~yR~~~kdG~~vwvet~~~~~ 261 (317)
T 4dj3_A 182 PGCVFLEVDERAVPLLGYLPQDLIGTSILTYLHPEDRPLMVAIHQKVLKYAGHPPFEHSPVRFCTQNGEYVILDSSWSSF 261 (317)
T ss_dssp TTSBEEEECTTHHHHHSCCHHHHTTSBGGGGBCTTTTTHHHHHHHHHHHTTTSCCEECCCEEEECTTSCEEEEEEEEEEE
T ss_pred CCCeEEEEChHHhhhcCcChHHHcCCCHHHeECHHHHHHHHHHHHHHHHcCCCccccceEEEEEccCCCEEEEEEEEEEE
Confidence 38999999999999999999999999999999999988888888888887664 357899999999999999999999
Q ss_pred eCC-CCCEEEEEEEEecchhh
Q 001902 287 KDD-EGKVLKFIGMQVEVSKH 306 (998)
Q Consensus 287 ~d~-~G~v~~~v~i~~DITer 306 (998)
+|. .+++.++|+..+-++..
T Consensus 262 ~np~s~~~e~II~~h~v~~~p 282 (317)
T 4dj3_A 262 VNPWSRKVSFIIGRHKVRTSP 282 (317)
T ss_dssp ECSSSCCEEEEEEEEEECCCC
T ss_pred ECCCCCcccEEEEEEEeccCC
Confidence 986 45667777777744443
No 380
>2jhe_A Transcription regulator TYRR; aromatic hydrocarbons catabolism, TYRR protei nucleotide-binding, transcription regulation, activator; HET: PG4; 2.30A {Escherichia coli}
Probab=98.54 E-value=6.9e-08 Score=98.04 Aligned_cols=99 Identities=11% Similarity=0.068 Sum_probs=73.3
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCC--cEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQT--DVTVQLI 551 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~--~~~~e~~ 551 (998)
++.+++++++||+++|.+|+ |+++|++|+++||++.++++|+++..+.++... ...+..+. ....++.
T Consensus 82 l~~il~~~~~gvi~~D~~g~---I~~~N~aa~~llg~~~~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 151 (190)
T 2jhe_A 82 LSALLEALPEPVLSVDMKSK---VDMANPASCQLFGQKLDRLRNHTAAQLINGFNF-------LRWLESEPQDSHNEHVV 151 (190)
T ss_dssp HHHHHHHCSSCEEEECTTCB---EEEECHHHHHHHTSCHHHHTTSBGGGTSTTCCH-------HHHHHTCCCSCEEEEEE
T ss_pred HHHHHHhCCCcEEEEcCCCC---EEEEcHHHHHHhCCCHHHhcCccHHHHhCCCCH-------HHHHhcCCCCCcceEEE
Confidence 68899999999999999888 999999999999999999999998877765431 22334343 2333332
Q ss_pred EEecCCcEEEEEEEEeeeccCC--------EEEEEEecCCcccc
Q 001902 552 NYTKSGKKFWNLFHLQPMRDQK--------YFIGVQLDGSEHLE 587 (998)
Q Consensus 552 ~~rkdG~~~wv~~~~spi~d~~--------~~vgi~rDITerk~ 587 (998)
. +|.. +.++++|+.+.+ +++.+++|||++++
T Consensus 152 ~---~g~~--~~~~~~pi~~~~~~~~~~~~g~v~~~~DiTe~~~ 190 (190)
T 2jhe_A 152 I---NGQN--FLMEITPVYLQDENDQHVLTGAVVMLRSTIRMGR 190 (190)
T ss_dssp E---TTEE--EEEEEEEETTTTEEEEEEEE-HHHHHHHHTTTCC
T ss_pred E---CCeE--EEEEEEEEEecCCCCcceEEeEEEEEeccchhcC
Confidence 2 7754 556788997622 34556899999873
No 381
>3gdi_A Period circadian protein homolog 2; tandem PAS domains, biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription; 2.40A {Mus musculus}
Probab=98.53 E-value=3.4e-07 Score=100.51 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=83.9
Q ss_pred CCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc-EE-EEEEEEecCCCEEEEEeeeeEEe
Q 001902 210 PDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS-YC-GRLLNYKKDGTPFWNLLTIAPIK 287 (998)
Q Consensus 210 ~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~-~~-~e~~~~~kdG~~~w~~~~~spi~ 287 (998)
.||+|+|+|+++..++||.++|++|+++..++||++.....+.+...+..++. .. .++++++|||..+|++...+++.
T Consensus 173 ~dG~~~yvd~~~~~lLGY~peELig~s~~~~iHpdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vwvet~~~~~~ 252 (309)
T 3gdi_A 173 PNCLFQAVDERAVPLLGYLPQDLIETPVLVQLHPSDRPLMLAIHKKILQAGGQPFDYSPIRFRTRNGEYITLDTSWSSFI 252 (309)
T ss_dssp TTCBEEEECTTHHHHHSCCHHHHTTSBHHHHBCTTSHHHHHHHHHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEEEEE
T ss_pred CCCeEEEECcccccccCcCHHHHcCCCHHHhCCHHHHHHHHHHHHHHHhcCCceeeceEEEEEccCCCEEEEEEEEEEEE
Confidence 38899999999999999999999999999999998877777777777776544 55 68999999999999999999998
Q ss_pred CC-CCCEEEEEEEEecchhhh
Q 001902 288 DD-EGKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 288 d~-~G~v~~~v~i~~DITerk 307 (998)
|. .+++.++|++.+-|+...
T Consensus 253 np~s~~~e~ii~~h~v~~gp~ 273 (309)
T 3gdi_A 253 NPWSRKISFIIGRHKVRVGPL 273 (309)
T ss_dssp CTTTCCEEEEEEEEEEEECCS
T ss_pred CCCCCcccEEEEEEEEccCCC
Confidence 85 567888899888877643
No 382
>4dj2_A Period circadian protein homolog 1; PAS domains, circadian clock protein, protein binding; 2.75A {Mus musculus}
Probab=98.48 E-value=2.6e-07 Score=101.90 Aligned_cols=104 Identities=13% Similarity=0.071 Sum_probs=85.6
Q ss_pred cEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcC-CcE-EEEEEEEecCCCEEE
Q 001902 201 TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNG-QSY-CGRLLNYKKDGTPFW 278 (998)
Q Consensus 201 ~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g-~~~-~~e~~~~~kdG~~~w 278 (998)
-+...+. ||+|+|+|+++..++||.++|++|+++..++||++.....+.+...+..+ ... ..++++++|||..+|
T Consensus 178 Fitrh~~---dG~~~yvd~~~~~lLGY~peELig~s~~~~vHPdD~~~~~~~~~~~l~~~g~~~~~~~yR~~~kdG~~vw 254 (320)
T 4dj2_A 178 FTTRHTP---SCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLAGQPFDHSPIRFCARNGEYVT 254 (320)
T ss_dssp EEEEECT---TCBEEEECTTHHHHHSCCHHHHTTSBGGGGBCGGGHHHHHHHHHHHTTSSSCCEECCCEEEECSSSCEEE
T ss_pred EEEEecC---CceEEEcCcceeccCCcChHHHcCCcHHHhCCHHHHHHHHHHHHHHHhcCCCcccceEEEEEccCCCEEE
Confidence 3444444 88999999999999999999999999999999988777666677777644 445 368999999999999
Q ss_pred EEeeeeEEeCC-CCCEEEEEEEEecchhhh
Q 001902 279 NLLTIAPIKDD-EGKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 279 ~~~~~spi~d~-~G~v~~~v~i~~DITerk 307 (998)
++...+++.|. .+++.++|+..+-|+...
T Consensus 255 vet~~~~~~np~s~~~e~II~~h~v~~gp~ 284 (320)
T 4dj2_A 255 MDTSWAGFVHPWSRKVAFVLGRHKVRTAPL 284 (320)
T ss_dssp EECEEEEEECTTTCSEEEEEEEEEESSCCS
T ss_pred EEEEEEEEECCCCCCccEEEEEEEEccCCC
Confidence 99999999885 577888899888777653
No 383
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.46 E-value=1.6e-06 Score=93.50 Aligned_cols=133 Identities=17% Similarity=0.172 Sum_probs=100.1
Q ss_pred ccCCCCce-eEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEEEEEecCCC
Q 001902 672 PLGSGDTG-SVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVCLITDYCPG 749 (998)
Q Consensus 672 ~LG~G~~g-~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~lV~E~~~g 749 (998)
.+..|..| .||+......+..+++|+-... ....+..|..+|+.+. +--|++++.++.+.+..|+|||+++|
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~------~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G 104 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS------VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPG 104 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH------HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCS
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC------CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCC
Confidence 34556655 6999887777788999986643 3456778999998884 33477889999999999999999999
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC-------------------------------------------
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ------------------------------------------- 786 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~------------------------------------------- 786 (998)
.++.+..... ......++.++...|..||..
T Consensus 105 ~~~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (272)
T 4gkh_A 105 KTAFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQ 178 (272)
T ss_dssp EEHHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHH
T ss_pred ccccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHH
Confidence 9888765432 122344566777777777741
Q ss_pred ---------------CceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 787 ---------------GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 787 ---------------~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.++|+|++|.|||++.++.+-|+||+.+..
T Consensus 179 ~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 179 VWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 158999999999999877777999998843
No 384
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.45 E-value=1.1e-06 Score=96.78 Aligned_cols=133 Identities=18% Similarity=0.144 Sum_probs=97.4
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC---CccceeEEEe-eCCeEEEEEe
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQ-TKTHVCLITD 745 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~l~~~~~-~~~~~~lV~E 745 (998)
++.++.|....||++ +..+++|+... ......+..|..+|+.+.+. .|++++.+.. ..+..++|||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-----~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e 93 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPKS-----QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYR 93 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEESS-----HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecCC-----chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEe
Confidence 456788999999998 46788997532 23456788999999999642 3667777664 4566889999
Q ss_pred cCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---------------------------------------
Q 001902 746 YCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQ--------------------------------------- 786 (998)
Q Consensus 746 ~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~--------------------------------------- 786 (998)
|++|.+|....-. .++......++.++...|..||+.
T Consensus 94 ~i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~ 169 (306)
T 3tdw_A 94 KVQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLR 169 (306)
T ss_dssp CCCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHH
T ss_pred ccCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhH
Confidence 9999888764221 145666666667777777766642
Q ss_pred ---------------------CceeccCCCCcEEEec---CCc-EEEEeccCccc
Q 001902 787 ---------------------GIIYRDLKPENVLLQG---NGH-VSLTDFDLSCL 816 (998)
Q Consensus 787 ---------------------~IiHrDLkP~NILi~~---~g~-vkL~DFG~a~~ 816 (998)
.++|+|++|.|||++. ++. +.|+||+.+..
T Consensus 170 ~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 170 DYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2499999999999997 355 58999998854
No 385
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.30 E-value=2.1e-06 Score=96.94 Aligned_cols=77 Identities=10% Similarity=0.179 Sum_probs=59.3
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC--ccceeEEEeeC-CeEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF--VPALYASFQTK-THVCLI 743 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n--Iv~l~~~~~~~-~~~~lV 743 (998)
...++.|+.|..+.+|++.. .+..+++|+.... ..+..|..+++.+.... +++++.+.... +..|+|
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~--------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv 112 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA--------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCI 112 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC--------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEE
T ss_pred CceEEECCCCCcceEEEEEE--CCcEEEEEeCCch--------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEE
Confidence 45567899999999999885 5889999987543 25778999999986544 56777776654 678999
Q ss_pred EecCCCCchh
Q 001902 744 TDYCPGGELF 753 (998)
Q Consensus 744 ~E~~~ggsL~ 753 (998)
|||++|.+|.
T Consensus 113 ~e~l~G~~l~ 122 (362)
T 3ovc_A 113 SRRAQGVTLQ 122 (362)
T ss_dssp EECCCSEETT
T ss_pred EEecCCCCcc
Confidence 9999887664
No 386
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.06 E-value=7.8e-06 Score=93.43 Aligned_cols=81 Identities=14% Similarity=0.107 Sum_probs=51.2
Q ss_pred cccccCCCCceeEEEEEEccCCeEEEEEEeecccc-cC---hhHHHHHHHHHHHHHhCCC---CCccceeEEEeeCCeEE
Q 001902 669 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LN---RNKVHRACAEREILDMLDH---PFVPALYASFQTKTHVC 741 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~-~~---~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~~~~~~ 741 (998)
.++.||.|.++.||++....+++.+++|....... .. .....+...|..+++.+.. ..+++++.+ +.+..+
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~ 111 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAV 111 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTE
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccE
Confidence 45789999999999997655678899998654321 00 0123455678888887732 345566643 344568
Q ss_pred EEEecCCCCc
Q 001902 742 LITDYCPGGE 751 (998)
Q Consensus 742 lV~E~~~ggs 751 (998)
+||||++|..
T Consensus 112 lvmE~l~g~~ 121 (397)
T 2olc_A 112 TVMEDLSHLK 121 (397)
T ss_dssp EEECCCTTSE
T ss_pred EEEEeCCCcc
Confidence 9999997743
No 387
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.98 E-value=2.4e-05 Score=87.81 Aligned_cols=86 Identities=12% Similarity=0.028 Sum_probs=56.8
Q ss_pred cccccc-CCCCceeEEEEEEc--c----CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC---CCccceeEEEeeC
Q 001902 668 RPIKPL-GSGDTGSVHLVELC--G----SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH---PFVPALYASFQTK 737 (998)
Q Consensus 668 ~~~~~L-G~G~~g~Vy~a~~~--~----~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~~ 737 (998)
..++.| +.|..+.+|++... . ++..+++|+..............+..|..+++.+.. -.+++++.+....
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence 345677 88999999998753 1 267899998764320000001345678888887742 3577888877654
Q ss_pred ---CeEEEEEecCCCCchh
Q 001902 738 ---THVCLITDYCPGGELF 753 (998)
Q Consensus 738 ---~~~~lV~E~~~ggsL~ 753 (998)
+..|+||||++|.++.
T Consensus 103 ~~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 103 DVLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp TTTSSCEEEEECCCCBCCC
T ss_pred CccCCceEEEEecCCCChh
Confidence 3568999999887654
No 388
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.92 E-value=1.4e-05 Score=87.05 Aligned_cols=78 Identities=19% Similarity=0.101 Sum_probs=58.8
Q ss_pred cccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC---CccceeEEEeeCCeEEEE
Q 001902 667 FRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP---FVPALYASFQTKTHVCLI 743 (998)
Q Consensus 667 y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~---nIv~l~~~~~~~~~~~lV 743 (998)
..-++.|+.|.++.||++.. .+|+.+++|+..... ......+..|...|+.+.+. .+++++.+. ..++|
T Consensus 17 ~~~~~~l~gG~~n~vy~v~~-~dG~~~vvK~~~~~~---~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lv 88 (288)
T 3d1u_A 17 VAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDA---PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLA 88 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTC---CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEE
T ss_pred ccceeeeCCcchhheEEEEe-CCCCeEEEEecCCCC---cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEE
Confidence 34567899999999999986 468899999865321 11124678899999999765 577887753 35899
Q ss_pred EecCCCCch
Q 001902 744 TDYCPGGEL 752 (998)
Q Consensus 744 ~E~~~ggsL 752 (998)
|||++|.++
T Consensus 89 me~l~g~~~ 97 (288)
T 3d1u_A 89 MEWVDERPP 97 (288)
T ss_dssp EECCCCCCC
T ss_pred EEecccCCC
Confidence 999998764
No 389
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.89 E-value=0.0001 Score=81.90 Aligned_cols=137 Identities=14% Similarity=0.116 Sum_probs=79.0
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC--CCCccceeE------EEeeCCeEE
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD--HPFVPALYA------SFQTKTHVC 741 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~--h~nIv~l~~------~~~~~~~~~ 741 (998)
++.|+.|..+.||++.. .+..+++|+.... . ..+..|..+++.|. .-.|++++. +....+..+
T Consensus 37 ~~~l~gG~~n~~~~v~~--~~~~~vlk~~~~~----~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~ 107 (346)
T 2q83_A 37 IDVIQGNQMALVWKVHT--DSGAVCLKRIHRP----E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLF 107 (346)
T ss_dssp EEECC----CEEEEEEE--TTEEEEEEEECSC----H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEE
T ss_pred eeeccccccCcEEEEEe--CCCCEEEEecCCC----H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEE
Confidence 45677778899999986 3345999988752 1 23334555555552 113444443 123467789
Q ss_pred EEEecCCCCchh-----------H---HHhh--CCCC-C---------CCHH--------H-------------------
Q 001902 742 LITDYCPGGELF-----------L---LLDR--QPTK-V---------LKED--------A------------------- 768 (998)
Q Consensus 742 lV~E~~~ggsL~-----------~---~l~~--~~~~-~---------l~~~--------~------------------- 768 (998)
+||+|++|.++. . .++. .... + ..+. .
T Consensus 108 ~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 187 (346)
T 2q83_A 108 VVYDWIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQL 187 (346)
T ss_dssp EEEECCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHH
T ss_pred EEEEeecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHH
Confidence 999999986542 1 1111 1000 0 0110 0
Q ss_pred ----HHHHHHHHHHHHHHHHH-------------CCceeccCCCCcEEEecCCcEEEEeccCcc
Q 001902 769 ----VRFYAAEVVVALEYLHC-------------QGIIYRDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 769 ----~~~i~~qil~aL~~LH~-------------~~IiHrDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
+..+..++..++.+|+. ..++|+|++|.|||++.++.+.|+||+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 188 YLQEIDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 11112233445666652 479999999999999888899999999874
No 390
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.62 E-value=0.00037 Score=76.63 Aligned_cols=77 Identities=19% Similarity=0.183 Sum_probs=61.1
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC---CCCccceeEEEeeCCeEEEEE
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD---HPFVPALYASFQTKTHVCLIT 744 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~---h~nIv~l~~~~~~~~~~~lV~ 744 (998)
.-++.|+.|.+..+|++.. ++..+++|+.... ....+..|...|+.|. ...|++++.+....+..++||
T Consensus 39 ~~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~------~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvm 110 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLIND--EVQTVFVKINERS------YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLL 110 (312)
T ss_dssp CEEEEECCSSSSEEEEEES--SSCEEEEEEEEGG------GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEE
T ss_pred eeeEEeCCccceeeeEEEE--CCCeEEEEeCCcc------cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEE
Confidence 3457789999999999985 4678899987643 2456778888888873 367889999888888999999
Q ss_pred ecCCCCch
Q 001902 745 DYCPGGEL 752 (998)
Q Consensus 745 E~~~ggsL 752 (998)
||++|..+
T Consensus 111 e~l~G~~~ 118 (312)
T 3jr1_A 111 EALNKSKN 118 (312)
T ss_dssp ECCCCCCC
T ss_pred EeccCCCC
Confidence 99998764
No 391
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.47 E-value=0.00042 Score=79.63 Aligned_cols=77 Identities=25% Similarity=0.266 Sum_probs=46.3
Q ss_pred cccccCCCCceeEEEEEEccCCeEEEEEEeecccc-cChh---HHHHHHHHHHHHHh---CCCCCccceeEEEeeCCeEE
Q 001902 669 PIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVM-LNRN---KVHRACAEREILDM---LDHPFVPALYASFQTKTHVC 741 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~-~~~~---~~~~~~~E~~il~~---l~h~nIv~l~~~~~~~~~~~ 741 (998)
.++.||.|..+.||++.. +++.++||....... .... .......|.+++.. .....+++++.+. .+..+
T Consensus 38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~ 113 (420)
T 2pyw_A 38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMAL 113 (420)
T ss_dssp EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTE
T ss_pred EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccE
Confidence 357789999999999964 567899995432111 0000 00112223333332 2345677887665 46678
Q ss_pred EEEecC-CC
Q 001902 742 LITDYC-PG 749 (998)
Q Consensus 742 lV~E~~-~g 749 (998)
+||||+ +|
T Consensus 114 lv~e~l~~g 122 (420)
T 2pyw_A 114 IGMRYLEPP 122 (420)
T ss_dssp EEECCCCTT
T ss_pred EEEeecCCc
Confidence 999999 77
No 392
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.33 E-value=0.00033 Score=76.52 Aligned_cols=71 Identities=14% Similarity=0.027 Sum_probs=45.3
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc-cceeEEEeeCCeEEEEEecC-
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYC- 747 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lV~E~~- 747 (998)
++.|+.|....+|++ ..+++|+....... ......|..+++.+....+ ++++.+. .+.-++|+||+
T Consensus 23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~----~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~ 90 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEE----YINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIA 90 (301)
T ss_dssp CEEEESCSSEEEEEE------TTEEEEEECC--------CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCT
T ss_pred eeEcCCcccccccee------eeEEEECCCCCccc----eeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecC
Confidence 688999999999999 45889987653111 1122457777777643223 5666543 33346899999
Q ss_pred CCCch
Q 001902 748 PGGEL 752 (998)
Q Consensus 748 ~ggsL 752 (998)
+|.+|
T Consensus 91 ~g~~l 95 (301)
T 3dxq_A 91 GAQTM 95 (301)
T ss_dssp TCEEC
T ss_pred CCccC
Confidence 76555
No 393
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.16 E-value=0.001 Score=75.12 Aligned_cols=139 Identities=19% Similarity=0.270 Sum_probs=83.5
Q ss_pred ccccCCCCceeEEEEEEcc-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEE
Q 001902 670 IKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 741 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 741 (998)
++.|..|-...+|++.... .++.|++|+.... . .....+.+|..+++.|. +.-.+++++.+.+ .
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~---~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g 126 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-L---QGVDSLVLESVMFAILAERSLGPQLYGVFPE----G 126 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-------CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----E
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-c---chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----c
Confidence 3567788889999998642 3578999986432 1 12345567999988884 3334677766543 2
Q ss_pred EEEecCCCCchhH--------------HHh---hC--C-CCCC--CHHHHHHHHHHHHH-------------------HH
Q 001902 742 LITDYCPGGELFL--------------LLD---RQ--P-TKVL--KEDAVRFYAAEVVV-------------------AL 780 (998)
Q Consensus 742 lV~E~~~ggsL~~--------------~l~---~~--~-~~~l--~~~~~~~i~~qil~-------------------aL 780 (998)
+||||++|.+|.. .|. .. . .... -..++..+..++.. .+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 8999998866531 111 11 0 1111 13455656544422 23
Q ss_pred HHHH----H----CCceeccCCCCcEEEecC----CcEEEEeccCccc
Q 001902 781 EYLH----C----QGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 816 (998)
Q Consensus 781 ~~LH----~----~~IiHrDLkP~NILi~~~----g~vkL~DFG~a~~ 816 (998)
..|. . ..++|+|+.+.|||++.+ +.+.|+||..+..
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 3333 2 249999999999999976 7899999998843
No 394
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.15 E-value=0.00047 Score=64.22 Aligned_cols=99 Identities=13% Similarity=0.113 Sum_probs=79.4
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCCh--hhhcCCCCccccCCCCCH--HHHHHHHHHHhcCCcEEEEEEEEecCCc
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSR--EEILGRNCRFLQGPETDP--ATVRKIRAAIDNQTDVTVQLINYTKSGK 558 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~--eEliG~~~~~l~~p~~~~--~~~~~i~~~l~~g~~~~~e~~~~rkdG~ 558 (998)
.-+.-.|.+|+ |++|.....+ .+|.. +||||+++.++.|+++.. ...+.+.+++..|.....-++++.|||.
T Consensus 8 ~F~sRh~~dGK---f~~vDq~~~r-~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~ 83 (132)
T 1oj5_A 8 SFMTKQDTTGK---IISIDTSSLR-AAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGT 83 (132)
T ss_dssp EEEEEECTTCC---EEEEECHHHH-TTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSC
T ss_pred eeEEeecCCCc---EEEEeccccc-ccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCc
Confidence 34566788888 9999998874 77777 999999999999999865 7778888889888888888999999999
Q ss_pred EEEEEEEEeeeccCC-----EEEEEEecCCcc
Q 001902 559 KFWNLFHLQPMRDQK-----YFIGVQLDGSEH 585 (998)
Q Consensus 559 ~~wv~~~~spi~d~~-----~~vgi~rDITer 585 (998)
.+|+......+++.. +++++-.=|.+.
T Consensus 84 ~V~~qT~sk~f~np~t~e~e~Ivs~n~v~r~~ 115 (132)
T 1oj5_A 84 MLSAHTRCKLCYPQSPDMQPFIMGIHIIDREH 115 (132)
T ss_dssp EEEEEEEEEEECC----CCCEEEEEEEEECC-
T ss_pred EEEEEEEEEEecCCCCCCCCEEEEEEEEEcCC
Confidence 999998887777652 777775544444
No 395
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.11 E-value=0.0012 Score=73.04 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=71.9
Q ss_pred cccCCCCcee-EEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCccceeEEEeeCCeEEEEEecC
Q 001902 671 KPLGSGDTGS-VHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYASFQTKTHVCLITDYC 747 (998)
Q Consensus 671 ~~LG~G~~g~-Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~~~~~~~~~lV~E~~ 747 (998)
+.|+.|+... +|++.. .++..+++|....... ..+..|..+++.+.. -.+++++.+....+ +++||++
T Consensus 24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~~------~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l 94 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEEG------GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDL 94 (333)
T ss_dssp CC--------CCEEEEC-TTCCEEEEEECCTTTT------CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCC
T ss_pred eECCCCCCCceEEEEEc-CCCCeEEEEECCCCCC------ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeC
Confidence 4566665554 667653 2366788886543210 223446666666632 34567776533333 6899999
Q ss_pred CCCchhHHHhhC---------------------C---CCCCCHHHHH-------H-HH------------HHHHHHHHHH
Q 001902 748 PGGELFLLLDRQ---------------------P---TKVLKEDAVR-------F-YA------------AEVVVALEYL 783 (998)
Q Consensus 748 ~ggsL~~~l~~~---------------------~---~~~l~~~~~~-------~-i~------------~qil~aL~~L 783 (998)
++.++.+.+... . ...+...... . +. ..+...+..+
T Consensus 95 ~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l 174 (333)
T 3csv_A 95 GDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQI 174 (333)
T ss_dssp CSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 776665433211 0 0112221110 0 00 0111222333
Q ss_pred H------HCCceeccCCCCcEEEecC----CcEEEEeccCccc
Q 001902 784 H------CQGIIYRDLKPENVLLQGN----GHVSLTDFDLSCL 816 (998)
Q Consensus 784 H------~~~IiHrDLkP~NILi~~~----g~vkL~DFG~a~~ 816 (998)
. ...++|+|+.|.|||++.+ +.+.|+||+.+..
T Consensus 175 ~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 175 LSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1 2369999999999999874 6899999998854
No 396
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.10 E-value=0.0016 Score=71.57 Aligned_cols=144 Identities=19% Similarity=0.232 Sum_probs=80.4
Q ss_pred CcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCC--CccceeEE------EeeC
Q 001902 666 HFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHP--FVPALYAS------FQTK 737 (998)
Q Consensus 666 ~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~--nIv~l~~~------~~~~ 737 (998)
...-++.|+.|....+|++... +| .+++|+..... ....+..|..+++.+... .+++++.. ....
T Consensus 23 ~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~-----~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~ 95 (322)
T 2ppq_A 23 SLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV-----EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELS 95 (322)
T ss_dssp CEEEEEEECC---EEEEEEEES-SC-CEEEEEECC--------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEET
T ss_pred cceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC-----CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEEC
Confidence 3344577888999999999863 33 68899887521 112344577777666321 13444321 1234
Q ss_pred CeEEEEEecCCCCchhH-----------H---HhhC--C--CC---CCCHHHHHH---------------HHHHHHHHHH
Q 001902 738 THVCLITDYCPGGELFL-----------L---LDRQ--P--TK---VLKEDAVRF---------------YAAEVVVALE 781 (998)
Q Consensus 738 ~~~~lV~E~~~ggsL~~-----------~---l~~~--~--~~---~l~~~~~~~---------------i~~qil~aL~ 781 (998)
+..+++|+|++|..+.. . ++.. . .. ......-.. +...+...+.
T Consensus 96 g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~ 175 (322)
T 2ppq_A 96 GRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEID 175 (322)
T ss_dssp TEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHH
T ss_pred CEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 66799999998865421 0 1110 0 00 011000000 0011344555
Q ss_pred HHHH-------CCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 782 YLHC-------QGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 782 ~LH~-------~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.++. .+++|+|++|.|||++.++.+.|+||+.+..
T Consensus 176 ~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 176 YLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp HHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 5553 3699999999999999776668999998743
No 397
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.09 E-value=0.0013 Score=75.70 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=50.7
Q ss_pred cccccCCCCceeEEEEEEcc-------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-ccceeEEEeeCCeE
Q 001902 669 PIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHV 740 (998)
Q Consensus 669 ~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~ 740 (998)
-++.|+.|....||++.... .+..+++|+.... .. ...+..|..+++.+...+ .+++++.+.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~---~~~li~E~~~l~~L~~~g~~P~l~~~~~~---- 147 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ET---ESHLVAESVIFTLLSERHLGPKLYGIFSG---- 147 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CC---HHHHHHHHHHHHHHHHTTSSSCEEEEETT----
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----
Confidence 34678899999999998742 2578999988431 01 134446888888884333 4677765542
Q ss_pred EEEEecCCCCch
Q 001902 741 CLITDYCPGGEL 752 (998)
Q Consensus 741 ~lV~E~~~ggsL 752 (998)
.+||||++|.+|
T Consensus 148 g~v~e~l~G~~l 159 (429)
T 1nw1_A 148 GRLEEYIPSRPL 159 (429)
T ss_dssp EEEECCCCEEEC
T ss_pred CEEEEEeCCccc
Confidence 389999987444
No 398
>1oj5_A Steroid receptor coactivator 1A; transcriptional coactivator, complex, LXXLL motif, transcriptional regulation; 2.2A {Mus musculus} SCOP: d.110.3.8
Probab=97.08 E-value=0.00046 Score=64.30 Aligned_cols=95 Identities=8% Similarity=-0.004 Sum_probs=75.1
Q ss_pred CCCCceEEccHHHHHHcCCCh--hhhcCCCCCcccCCCCCh--HHHHHHHHHHHcCCcEEEEEEEEecCCCEEEEEeeee
Q 001902 209 KPDYPIMYASAGFFKMTGYTS--KEVVGRNCRFLQGAGTDP--EDVAKIRETLQNGQSYCGRLLNYKKDGTPFWNLLTIA 284 (998)
Q Consensus 209 g~dG~I~~vN~a~~~l~Gys~--eEliG~~~~~l~~~~~~~--~~~~~i~~~l~~g~~~~~e~~~~~kdG~~~w~~~~~s 284 (998)
+.||+|+++..... ..+|.. +||+|+.+.+++++++.. ...+....++..|...+.-++++.|+|..+|++....
T Consensus 14 ~~dGKf~~vDq~~~-r~~~~~g~qdLlGrsiy~f~H~~D~~~s~l~~h~~~vl~~Gq~~S~~YRfr~k~g~~V~~qT~sk 92 (132)
T 1oj5_A 14 DTTGKIISIDTSSL-RAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGTMLSAHTRCK 92 (132)
T ss_dssp CTTCCEEEEECHHH-HTTCCSCHHHHHHHHHHHHTSCBTTBCCHHHHHHHHHHHHSEEECCCEEEECTTSCEEEEEEEEE
T ss_pred cCCCcEEEEecccc-cccccccHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHcCCccccceEEEecCCcEEEEEEEEE
Confidence 34888999999887 478888 999999999999988854 7778888888888888888999999999999999888
Q ss_pred EEeCCC-CCEEEEEEEEecch
Q 001902 285 PIKDDE-GKVLKFIGMQVEVS 304 (998)
Q Consensus 285 pi~d~~-G~v~~~v~i~~DIT 304 (998)
.+++.- .++.+++++-.=+.
T Consensus 93 ~f~np~t~e~e~Ivs~n~v~r 113 (132)
T 1oj5_A 93 LCYPQSPDMQPFIMGIHIIDR 113 (132)
T ss_dssp EECC----CCCEEEEEEEEEC
T ss_pred EecCCCCCCCCEEEEEEEEEc
Confidence 887752 34556666554443
No 399
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=96.97 E-value=0.005 Score=62.82 Aligned_cols=122 Identities=16% Similarity=0.103 Sum_probs=80.7
Q ss_pred CchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH-HCCceeccCCCCcEEEecCCcEEEEeccCccccCCCCCCCCCcc
Q 001902 750 GELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLH-CQGIIYRDLKPENVLLQGNGHVSLTDFDLSCLTSCKPQLLLPTT 828 (998)
Q Consensus 750 gsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH-~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~~~~~~~~~~~~~ 828 (998)
-+|.++|... +.+++++++|.++.|.+.+|.-+- .+.-..+=+.|..|++..+|.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~-~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~------------- 97 (229)
T 2yle_A 33 LSLEEILRLY-NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD------------- 97 (229)
T ss_dssp EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C----------------
T ss_pred ccHHHHHHHc-CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc-------------
Confidence 4789999875 467999999999999999988772 22222444567999999999987664 2110
Q ss_pred hhhhhcccCCCCcccccccccccccccCCCCcccchhhcCCCCCChhHHHHHHHHHHHHHc-CCCCCCCCChHHHHHHHH
Q 001902 829 NEKKRRHKGQQNPVFMAEPMRASNSFVGTEEYIAPEIIAGAGHTSAVDWWALGILLYEMLY-GYTPFRGKTRQKTFANIL 907 (998)
Q Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDIwSlG~il~eLlt-G~~Pf~~~~~~~~~~~i~ 907 (998)
.....+.|||.+. ...+.+.=|||||+++|..+- |-++
T Consensus 98 --------------------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e-------------- 136 (229)
T 2yle_A 98 --------------------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKE-------------- 136 (229)
T ss_dssp -----------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCT--------------
T ss_pred --------------------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCc--------------
Confidence 0123456777653 344568899999999999983 3222
Q ss_pred hCCCCCCCCCCCcHHHHHHHHHcccc
Q 001902 908 HKDLKFPSSTPTSLHAKQLMYRLLHR 933 (998)
Q Consensus 908 ~~~~~~~~~~~~s~~l~~Ll~~~L~~ 933 (998)
.....+|..+.+||..|..-
T Consensus 137 ------~eE~eLS~~LE~LL~~Mt~~ 156 (229)
T 2yle_A 137 ------NEERELSPPLEQLIDHMANT 156 (229)
T ss_dssp ------TEEECCCHHHHHHHHHHTTC
T ss_pred ------ccchhhCHHHHHHHHHHHhc
Confidence 12234688889999988755
No 400
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.90 E-value=0.0022 Score=72.17 Aligned_cols=75 Identities=21% Similarity=0.232 Sum_probs=45.5
Q ss_pred ccccCCCCceeEEEEEEcc--------CCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCC-ccceeEEEeeCCeE
Q 001902 670 IKPLGSGDTGSVHLVELCG--------SGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPF-VPALYASFQTKTHV 740 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~--------~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~n-Iv~l~~~~~~~~~~ 740 (998)
+..|+.|....+|++.... .+..+++|+...... .......|..+++.+...+ +++++..+ .+
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~----~~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~-- 109 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD----ELYNTISEFEVYKTMSKYKIAPQLLNTF--NG-- 109 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG----GTSCHHHHHHHHHHHHHTTSSCCEEEEE--TT--
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc----ceecHHHHHHHHHHHHhcCCCCceEEec--CC--
Confidence 4678888899999998743 136899998764311 1112356788887774333 55776544 22
Q ss_pred EEEEecCCCCch
Q 001902 741 CLITDYCPGGEL 752 (998)
Q Consensus 741 ~lV~E~~~ggsL 752 (998)
++||||++|.++
T Consensus 110 ~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 GRIEEWLYGDPL 121 (369)
T ss_dssp EEEEECCCSEEC
T ss_pred cEEEEEecCCcC
Confidence 689999988554
No 401
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.89 E-value=0.0027 Score=68.73 Aligned_cols=80 Identities=19% Similarity=0.115 Sum_probs=55.8
Q ss_pred CCcccccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC---CCccceeEEEeeCCeEE
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH---PFVPALYASFQTKTHVC 741 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h---~nIv~l~~~~~~~~~~~ 741 (998)
....-+..+|.|..+.||++.. .+|+.|++|+....... ....+..|...|+.|.. --+++++.+ .. -+
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~---~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~--~~ 86 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPA---LDGLFRAEALGLDWLGRSFGSPVPQVAGW--DD--RT 86 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCC---CTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ET--TE
T ss_pred CCeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcc---hhhHHHHHHHHHHHHHhhCCCCcceEEec--cC--ce
Confidence 4566678899999999999986 57899999986543221 12346679999988843 234555543 22 36
Q ss_pred EEEecCCCCch
Q 001902 742 LITDYCPGGEL 752 (998)
Q Consensus 742 lV~E~~~ggsL 752 (998)
+||||++++..
T Consensus 87 lv~e~l~~~~~ 97 (288)
T 3f7w_A 87 LAMEWVDERPP 97 (288)
T ss_dssp EEEECCCCCCC
T ss_pred EEEEeecccCC
Confidence 89999977543
No 402
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.85 E-value=0.0048 Score=67.91 Aligned_cols=138 Identities=14% Similarity=0.054 Sum_probs=78.8
Q ss_pred cccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCC--CCccceeEE-----EeeCCeEEEE
Q 001902 671 KPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDH--PFVPALYAS-----FQTKTHVCLI 743 (998)
Q Consensus 671 ~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h--~nIv~l~~~-----~~~~~~~~lV 743 (998)
..|+ |....||++.. .+|+.+++|+...... ....+..|..+++.+.. -.+++++.. ....+..++|
T Consensus 32 ~~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~----~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l 105 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQD-EDRRRFVVKFYRPERW----TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAV 105 (328)
T ss_dssp EEEC-CSSSEEEEECC-TTCCCEEEEEECTTTS----CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEE
T ss_pred Eeec-CcccceEEEEc-CCCCEEEEEEcCCCCC----CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEE
Confidence 4566 88889998865 3466899999864311 12355567777777632 124444432 2235567899
Q ss_pred EecCCCCchh-----------HH---Hhh----CCC---CCCCHHHH----------------------HHHHHHHHHHH
Q 001902 744 TDYCPGGELF-----------LL---LDR----QPT---KVLKEDAV----------------------RFYAAEVVVAL 780 (998)
Q Consensus 744 ~E~~~ggsL~-----------~~---l~~----~~~---~~l~~~~~----------------------~~i~~qil~aL 780 (998)
|+|++|.++. .. ++. ... ..++.... ...+..++..+
T Consensus 106 ~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 185 (328)
T 1zyl_A 106 FPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAV 185 (328)
T ss_dssp EECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHH
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHH
Confidence 9999875542 01 111 000 11121110 11111222222
Q ss_pred HHH----HHCCceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 781 EYL----HCQGIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 781 ~~L----H~~~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.-+ +...++|+|++|.|||++ + .+.|+||+.+..
T Consensus 186 ~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 186 TAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp HHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred HHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 221 123589999999999999 5 899999998743
No 403
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.83 E-value=0.0053 Score=71.09 Aligned_cols=75 Identities=15% Similarity=0.158 Sum_probs=49.5
Q ss_pred ccccCCCCceeEEEEEEccCCeEEEEEEeecccccChhHHHHHHHHHHHHHhCCCCCc-cceeEEEeeCCeEEEEEecCC
Q 001902 670 IKPLGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNKVHRACAEREILDMLDHPFV-PALYASFQTKTHVCLITDYCP 748 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~h~nI-v~l~~~~~~~~~~~lV~E~~~ 748 (998)
++.|+.|-...+|++.....+..|++|+...... . . -....|..+++.|...++ +++++.+. + .+||||++
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~-~--~-idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~ 184 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTD-E--I-INREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMD 184 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CC-S--C-SCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChh-h--h-cCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeC
Confidence 4678889999999998754458899998754321 1 0 112468889998865444 57777663 2 25999998
Q ss_pred CCch
Q 001902 749 GGEL 752 (998)
Q Consensus 749 ggsL 752 (998)
|.+|
T Consensus 185 G~~l 188 (458)
T 2qg7_A 185 GYAL 188 (458)
T ss_dssp SEEC
T ss_pred CccC
Confidence 8555
No 404
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.82 E-value=0.0057 Score=67.96 Aligned_cols=30 Identities=23% Similarity=0.368 Sum_probs=27.1
Q ss_pred CceeccCCCCcEEEecCCcEEEEeccCccc
Q 001902 787 GIIYRDLKPENVLLQGNGHVSLTDFDLSCL 816 (998)
Q Consensus 787 ~IiHrDLkP~NILi~~~g~vkL~DFG~a~~ 816 (998)
.++|+|+.|.||+++.++.+.|+||+.+..
T Consensus 207 ~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 207 VLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp EEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred eeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 599999999999999888899999998754
No 405
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.44 E-value=0.011 Score=67.00 Aligned_cols=146 Identities=20% Similarity=0.294 Sum_probs=85.8
Q ss_pred CCcccccccCCCCceeEEEEEEcc-------CCeEEEEEEeeccccc-----------Chh----HHHHHHHHHHHHHhC
Q 001902 665 QHFRPIKPLGSGDTGSVHLVELCG-------SGQYFAMKAMDKGVML-----------NRN----KVHRACAEREILDML 722 (998)
Q Consensus 665 ~~y~~~~~LG~G~~g~Vy~a~~~~-------~~~~valK~i~~~~~~-----------~~~----~~~~~~~E~~il~~l 722 (998)
+.+.+ +.|..|-...+|++.... .++.|.+++....... ++. ....+..|..+++.+
T Consensus 53 ~~i~v-~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L 131 (401)
T 3f2s_A 53 DEFHI-SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAIL 131 (401)
T ss_dssp GGCEE-EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHH
T ss_pred hheEE-EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHH
Confidence 34444 667778889999998642 1478999987653210 110 012233588888888
Q ss_pred C-CCCccceeEEEeeCCeEEEEEecCCCCchhH--H------------Hh---hC--C-CCCCC--HHHHHHHHHHHH--
Q 001902 723 D-HPFVPALYASFQTKTHVCLITDYCPGGELFL--L------------LD---RQ--P-TKVLK--EDAVRFYAAEVV-- 777 (998)
Q Consensus 723 ~-h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~--~------------l~---~~--~-~~~l~--~~~~~~i~~qil-- 777 (998)
. +--.+++++++.. . +|+||++|-+|.. + |. .. . ..... ...+..+..++.
T Consensus 132 ~~~Gi~Pkl~~~~~~--G--~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~ 207 (401)
T 3f2s_A 132 AERSLGPKLYGIFPQ--G--RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRI 207 (401)
T ss_dssp HHTTSSCCEEEEETT--E--EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHC
T ss_pred HhcCCCCeEEEEeCC--C--eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhc
Confidence 4 4445677777643 2 8999999765521 1 11 11 0 11111 223444443322
Q ss_pred --------------------HHHH----HHHHC----CceeccCCCCcEEEecC------CcEEEEeccCcc
Q 001902 778 --------------------VALE----YLHCQ----GIIYRDLKPENVLLQGN------GHVSLTDFDLSC 815 (998)
Q Consensus 778 --------------------~aL~----~LH~~----~IiHrDLkP~NILi~~~------g~vkL~DFG~a~ 815 (998)
.-+. +|... .++|+|+.+.|||++.+ +.+.|+||..+.
T Consensus 208 ~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 208 KFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred cCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 1122 23222 48999999999999977 789999999884
No 406
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.90 E-value=0.015 Score=66.35 Aligned_cols=75 Identities=21% Similarity=0.304 Sum_probs=49.0
Q ss_pred ccccCCCCceeEEEEEEccC-------CeEEEEEEeecccccChhHHHHHHHHHHHHHhCC-CCCccceeEEEeeCCeEE
Q 001902 670 IKPLGSGDTGSVHLVELCGS-------GQYFAMKAMDKGVMLNRNKVHRACAEREILDMLD-HPFVPALYASFQTKTHVC 741 (998)
Q Consensus 670 ~~~LG~G~~g~Vy~a~~~~~-------~~~valK~i~~~~~~~~~~~~~~~~E~~il~~l~-h~nIv~l~~~~~~~~~~~ 741 (998)
++.|..|-...+|++..... +..|++|+...... ......+|..+++.+. +.-.+++++.+. + +
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~----~~idR~~E~~~l~~L~~~gi~P~l~~~~~--~--~ 146 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG----KFYDSKVELDVFRYLSNINIAPNIIADFP--E--G 146 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-----CCCCHHHHHHHHHHHHHTTSSCCEEEEET--T--E
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc----hhcCHHHHHHHHHHHHhcCCCCCEEEEcC--C--C
Confidence 46677888899999987421 57899998754321 1112345788887774 333566665332 2 6
Q ss_pred EEEecCCCCch
Q 001902 742 LITDYCPGGEL 752 (998)
Q Consensus 742 lV~E~~~ggsL 752 (998)
+||||++|.+|
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998664
No 407
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.11 E-value=0.17 Score=57.44 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=24.9
Q ss_pred ceeccCCCCcEEEe------cCCcEEEEeccCccc
Q 001902 788 IIYRDLKPENVLLQ------GNGHVSLTDFDLSCL 816 (998)
Q Consensus 788 IiHrDLkP~NILi~------~~g~vkL~DFG~a~~ 816 (998)
++|+|+.+.|||+. .++.+.++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 68999999999994 467899999999843
No 408
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=86.76 E-value=0.88 Score=49.86 Aligned_cols=77 Identities=13% Similarity=0.151 Sum_probs=50.7
Q ss_pred eEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcCCc---EEEEEEEEec-CCcE
Q 001902 484 NFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQTD---VTVQLINYTK-SGKK 559 (998)
Q Consensus 484 ~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g~~---~~~e~~~~rk-dG~~ 559 (998)
.++++|.. +++|+.+|..+++++|++.++++|++...+.+++. ...+...+..+.. ..++++.... +|..
T Consensus 44 ~Ll~~~~~--~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~~----~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~ 117 (337)
T 2ool_A 44 YLFVVSET--DLRIASVSANVEDLLRQPPASLLNVPIAHYLTAAS----AARLTHALHGGDPAAINPIRLDVVTPDGERA 117 (337)
T ss_dssp EEEEECTT--TCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHHH----HHHHHHHHCC----CCCSEEEEEEETTEEEE
T ss_pred EEEEEECC--CCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHHH----HHHHHHHHhcCCccccCcEEEEEeccCCCeE
Confidence 44556654 34599999999999999999999999888887643 3345555543321 2234444443 4667
Q ss_pred EEEEEEE
Q 001902 560 FWNLFHL 566 (998)
Q Consensus 560 ~wv~~~~ 566 (998)
||+.++.
T Consensus 118 f~~~~Hr 124 (337)
T 2ool_A 118 FNGILHR 124 (337)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 7877664
No 409
>2ool_A Sensor protein; bacteriophytochrome, photoconversion, photoreceptor, biliver signaling protein; HET: LBV; 2.20A {Rhodopseudomonas palustris} SCOP: d.110.2.1 d.110.3.9
Probab=84.31 E-value=1.2 Score=48.73 Aligned_cols=74 Identities=18% Similarity=0.151 Sum_probs=47.6
Q ss_pred EEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCc---EEEEEEEEec-CCCEEE
Q 001902 203 VVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQS---YCGRLLNYKK-DGTPFW 278 (998)
Q Consensus 203 ~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~---~~~e~~~~~k-dG~~~w 278 (998)
+++|. .+++|+.+|..+++++|++.++++|+++..+++++ ....+...+..+.. ...+++.... +|..+|
T Consensus 46 l~~~~--~~~~i~~~S~N~~~~lg~~~~~llG~~l~~ll~~~----~~~~l~~~l~~~~~~~~~p~~~~~~~~~~~~~f~ 119 (337)
T 2ool_A 46 FVVSE--TDLRIASVSANVEDLLRQPPASLLNVPIAHYLTAA----SAARLTHALHGGDPAAINPIRLDVVTPDGERAFN 119 (337)
T ss_dssp EEECT--TTCBEEEEETTHHHHHSSCGGGGTTCBGGGGBCHH----HHHHHHHHHCC----CCCSEEEEEEETTEEEEEE
T ss_pred EEEEC--CCCEEEEEehhHHHHHCcCHHHHcCCCHHHHcCHH----HHHHHHHHHhcCCccccCcEEEEEeccCCCeEEE
Confidence 44553 26889999999999999999999999998887753 33445555543321 1123443333 456666
Q ss_pred EEee
Q 001902 279 NLLT 282 (998)
Q Consensus 279 ~~~~ 282 (998)
+.+.
T Consensus 120 ~~~H 123 (337)
T 2ool_A 120 GILH 123 (337)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6544
No 410
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=78.77 E-value=7.7 Score=39.36 Aligned_cols=84 Identities=11% Similarity=0.069 Sum_probs=61.6
Q ss_pred CCCCccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEEEec
Q 001902 723 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQG 802 (998)
Q Consensus 723 ~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NILi~~ 802 (998)
.||+++.. .+-...+.+.+.++.-+.+.=+..+++ ++....+.++.+|+....++ ..=+|--|+|+||+++.
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-----~~~~eKlr~l~ni~~l~~~~--~~r~tf~L~P~NL~f~~ 114 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-----FTKNEKLRYLLNIKNLEEVN--RTRYTFVLAPDELFFTR 114 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-----SCHHHHHHHHHHGGGGGGGG--GSSEECCCSGGGEEECT
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-----cCHHHHHHHHHHHHHHHHHh--cCceEEEEecceEEEcC
Confidence 67888877 566677777777776543322233433 77888888888888877443 34478889999999999
Q ss_pred CCcEEEEeccCc
Q 001902 803 NGHVSLTDFDLS 814 (998)
Q Consensus 803 ~g~vkL~DFG~a 814 (998)
++.+++.=.|+-
T Consensus 115 ~~~p~i~~RGik 126 (215)
T 4ann_A 115 DGLPIAKTRGLQ 126 (215)
T ss_dssp TSCEEESCCEET
T ss_pred CCCEEEEEccCc
Confidence 999999888864
No 411
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=73.98 E-value=5.9 Score=40.33 Aligned_cols=83 Identities=10% Similarity=-0.010 Sum_probs=60.9
Q ss_pred CCCCccceeEEEeeCCeEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHH-HHHHCCceeccCCCCcEEEe
Q 001902 723 DHPFVPALYASFQTKTHVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALE-YLHCQGIIYRDLKPENVLLQ 801 (998)
Q Consensus 723 ~h~nIv~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~-~LH~~~IiHrDLkP~NILi~ 801 (998)
.||++ -..+-.+++.+.|.++.-+++.=+..++. ++....+.++.+|+.... ++ ..-+|--|+|+||+++
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-----~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~ 118 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-----TTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFN 118 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-----SCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEEC
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-----cCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEe
Confidence 57888 45555778888888887644433344433 677888887777776554 33 4557888999999999
Q ss_pred cCCcEEEEeccCc
Q 001902 802 GNGHVSLTDFDLS 814 (998)
Q Consensus 802 ~~g~vkL~DFG~a 814 (998)
.++.++|.=.|+-
T Consensus 119 ~~~~p~i~hRGi~ 131 (219)
T 4ano_A 119 RALEPFFLHVGVK 131 (219)
T ss_dssp TTCCEEESCCEET
T ss_pred CCCcEEEEEcCCc
Confidence 9999999999975
No 412
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=73.36 E-value=23 Score=32.53 Aligned_cols=89 Identities=19% Similarity=0.272 Sum_probs=50.8
Q ss_pred HHHHHHHHHhcC-CcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEEE
Q 001902 188 SDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCGR 266 (998)
Q Consensus 188 ~~~l~~ild~~~-d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~e 266 (998)
+.+++.+-+.+. +.|+++|. +|..++... .+.+|+++.. .+ .+..++. |+.+...
T Consensus 38 ~~~~~~~~~~~~~~~i~v~d~---~G~~~a~~~----------~~~iG~~~~~--~~--------~~~~al~-G~~~~~~ 93 (131)
T 1p0z_A 38 KALIDPMRSFSDATYITVGDA---SGQRLYHVN----------PDEIGKSMEG--GD--------SDEALIN-AKSYVSV 93 (131)
T ss_dssp HHHHHHHHHHSCCSEEEEEET---TSBEEECSS----------GGGTTSBCCS--SC--------CHHHHHH-CCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEEEcC---CCcEEEecC----------hhhCCCcccC--CC--------cHHHHhC-CCeEEEE
Confidence 344444444433 57888998 776776542 3458876431 11 1233443 4444432
Q ss_pred EEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchh
Q 001902 267 LLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSK 305 (998)
Q Consensus 267 ~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITe 305 (998)
. ....| +......||++++|+++|++.+..++..
T Consensus 94 ~--~g~~g---~~~~~~~PV~~~~g~viGvv~vg~~l~~ 127 (131)
T 1p0z_A 94 R--KGSLG---SSLRGKSPIQDATGKVIGIVSVGYTIEQ 127 (131)
T ss_dssp E--EETTE---EEEEEEEEEECTTCCEEEEEEEEEEGGG
T ss_pred E--Eccce---eeEEEEEeEECCCCCEEEEEEEEEEhHH
Confidence 2 12222 2334456999888999999999888754
No 413
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=73.26 E-value=19 Score=31.35 Aligned_cols=92 Identities=11% Similarity=0.144 Sum_probs=54.1
Q ss_pred HHHHHhhcCceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhc-CCCCccccCCCCCHHHHHHHHHHHhcCCcEEEEEEE
Q 001902 474 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEIL-GRNCRFLQGPETDPATVRKIRAAIDNQTDVTVQLIN 552 (998)
Q Consensus 474 l~~i~e~~~d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEli-G~~~~~l~~p~~~~~~~~~i~~~l~~g~~~~~e~~~ 552 (998)
...+..++|..+++-+...+ |+|.|.||.+||--+ +... |-+..... -+.--...+.-...+..|.. -.+.
T Consensus 22 iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ke-d~~~sg~S~~~~~-vE~~LS~LELeCqsLGhG~a---f~r~ 93 (127)
T 4ew7_A 22 IQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKE-DQPLSGDSYNRYG-VEVFLSSLELECQSLGHGAA---FCRR 93 (127)
T ss_dssp HHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSC-CCGGGCTTSSHHH-HHHHHHHHHHHHHHHCTTCE---EEEE
T ss_pred HHhhhcCCCccEEEecccce---EEEecchHHHHhhcc-cCcccCcccceee-ehhhHHHHHHHHHhhcCCce---EEEE
Confidence 56789999999999999777 999999999996433 2333 33322111 00000011112233444432 3455
Q ss_pred EecCCcEEEEEEEEeeeccCC
Q 001902 553 YTKSGKKFWNLFHLQPMRDQK 573 (998)
Q Consensus 553 ~rkdG~~~wv~~~~spi~d~~ 573 (998)
..-.|+.+-+.+--....+++
T Consensus 94 Fn~~~e~yQIRmE~iSf~~~e 114 (127)
T 4ew7_A 94 FNFHGEIYQIRMENISFDNNE 114 (127)
T ss_dssp EEETTEEEEEEEEEEECTTCC
T ss_pred eecCCceEEEEEEEeeecCCc
Confidence 567788887766655555555
No 414
>4dah_A Sporulation kinase D; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology, PAS-like fold; 2.03A {Bacillus subtilis} PDB: 4dbj_A 4dbi_A 4dak_A 3fos_A
Probab=70.46 E-value=17 Score=36.34 Aligned_cols=98 Identities=8% Similarity=0.118 Sum_probs=60.8
Q ss_pred chHHHHHHHHHhcCC--cEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcE
Q 001902 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSY 263 (998)
Q Consensus 186 ~~~~~l~~ild~~~d--~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~ 263 (998)
.....|..+....+. .++++|. +|+++..... ...|.+ + .. ...+..++..++.+
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~~~~~~~~----------~~~~~~---~---~~----r~~f~~a~~~~~~~ 111 (217)
T 4dah_A 55 KMQSILEKTFDSEPRFSGLYFLNA---KGDVTASTTE----------LKTKVN---L---AD----RSFFIKAKETKKTV 111 (217)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEET---TCBEEEESSC----------CSSCCB---C---TT----SHHHHHHHHHCSCE
T ss_pred HHHHHHHHHHhcCCcccEEEEECC---CCcEEEecCC----------CCCCCC---c---ch----hHHHHHHHhcCCcE
Confidence 344566667665544 6888998 7778876530 001111 1 11 13445566666665
Q ss_pred EEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhH
Q 001902 264 CGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 264 ~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~ 308 (998)
-.+...-...|. ++-....||++.+|++.|++++..++....+
T Consensus 112 is~~~~~~~~g~--~~i~ia~pi~~~~g~~~Gvl~~~i~l~~l~~ 154 (217)
T 4dah_A 112 ISDSYSSRITGQ--PIFTICVPVLDSKRNVTDYLVAAIQIDYLKN 154 (217)
T ss_dssp ECCCEECTTTCS--EEEEEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred EeceEEcCCCCC--EEEEEEEEEECCCCCEEEEEEEEEcHHHHHH
Confidence 544443345666 4556778999988999999999998876544
No 415
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=68.36 E-value=18 Score=39.11 Aligned_cols=74 Identities=19% Similarity=0.282 Sum_probs=44.0
Q ss_pred eEEEEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHH--HHHHHHHHHCC--c--ee-ccCCCCcEEEecCC-cEEEEe
Q 001902 739 HVCLITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEV--VVALEYLHCQG--I--IY-RDLKPENVLLQGNG-HVSLTD 810 (998)
Q Consensus 739 ~~~lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qi--l~aL~~LH~~~--I--iH-rDLkP~NILi~~~g-~vkL~D 810 (998)
.+.++|+|++|..|...-...-...+.... +.++ +-+++.+..+. . +. .--.|+|||++.++ .+.++|
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~~~f~~~~----~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~ID 231 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAPEVLTKST----MQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPID 231 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHHHHSCHHH----HHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECS
T ss_pred cceehhhhcCCCccccchhhhhhhhcCHHH----HHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEc
Confidence 567999999987776542221001133333 2332 34566666552 1 11 22588999998755 489999
Q ss_pred ccCccc
Q 001902 811 FDLSCL 816 (998)
Q Consensus 811 FG~a~~ 816 (998)
-+.++.
T Consensus 232 hn~af~ 237 (342)
T 1cja_A 232 SKIIPL 237 (342)
T ss_dssp CCCCCC
T ss_pred CCcccc
Confidence 999854
No 416
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=66.90 E-value=29 Score=41.50 Aligned_cols=82 Identities=21% Similarity=0.324 Sum_probs=51.4
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCC-----------C--CCC--CHHHHHHHHHHHH--HHHHHHHHCCcee
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------T--KVL--KEDAVRFYAAEVV--VALEYLHCQGIIY 790 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~--~~l--~~~~~~~i~~qil--~aL~~LH~~~IiH 790 (998)
+..|.+........| .|++++.+|.+++.+.+ . ..+ .......++..++ ..+.|+= ||
T Consensus 476 i~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YIL--Gl-- 550 (696)
T 2x6h_A 476 LTPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLL--GV-- 550 (696)
T ss_dssp CCCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred EeccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHc--cC--
Confidence 455666655554444 47777777777765431 0 011 1234445555544 2334443 44
Q ss_pred ccCCCCcEEEecCCcEEEEeccCc
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+|=+|+||||+.+|.+.=+|||..
T Consensus 551 GDRH~~NILid~tG~v~HIDFG~~ 574 (696)
T 2x6h_A 551 GDRHLDNLLLTTNGKLFHIDFGYI 574 (696)
T ss_dssp CCCCTTTEEECTTSCEEECCCCSC
T ss_pred CCCCCcceEEeCCCCEEEEeehhh
Confidence 699999999999999999999987
No 417
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=61.74 E-value=1.2e+02 Score=35.61 Aligned_cols=82 Identities=18% Similarity=0.306 Sum_probs=53.0
Q ss_pred cceeEEEeeCCeEEEEEecCCCCchhHHHhhCC-----------CC----CCCHHHHHHHHHHHHH--HHHHHHHCCcee
Q 001902 728 PALYASFQTKTHVCLITDYCPGGELFLLLDRQP-----------TK----VLKEDAVRFYAAEVVV--ALEYLHCQGIIY 790 (998)
Q Consensus 728 v~l~~~~~~~~~~~lV~E~~~ggsL~~~l~~~~-----------~~----~l~~~~~~~i~~qil~--aL~~LH~~~IiH 790 (998)
+..|.+........+ .|++++.++.+++...+ .. .........++..++- .+.|+= ||
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YIL--Gi-- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYIL--GV-- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHH--TC--
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheee--ec--
Confidence 566777766666555 58888777766654321 00 0123444555555542 344443 44
Q ss_pred ccCCCCcEEEecCCcEEEEeccCc
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+|=+++||||+.+|++.=+|||..
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~ 500 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYI 500 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSC
T ss_pred cCCCCcceeEcCCCCEeeeehHHh
Confidence 688999999999999999999987
No 418
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=57.62 E-value=1.5 Score=50.48 Aligned_cols=64 Identities=3% Similarity=-0.061 Sum_probs=18.2
Q ss_pred ccccccCCCCceeEEEEEEccCCeEEEE------EEeecccccChhHHHHHHHHHHHHHhCCCCCccceeEEEe
Q 001902 668 RPIKPLGSGDTGSVHLVELCGSGQYFAM------KAMDKGVMLNRNKVHRACAEREILDMLDHPFVPALYASFQ 735 (998)
Q Consensus 668 ~~~~~LG~G~~g~Vy~a~~~~~~~~val------K~i~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~l~~~~~ 735 (998)
.+.+.|| ||.||++.......+||+ |..+... ........+.++..+++.++|||+++.+.+..
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~-~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDG-VSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC------------------------------------CBCCCEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccc-ccccccccccccccccccccccccCCCcceEE
Confidence 4456676 999999998665567888 6554332 23334456778889999999999999988764
No 419
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=54.91 E-value=50 Score=30.64 Aligned_cols=92 Identities=18% Similarity=0.212 Sum_probs=51.9
Q ss_pred hHHHHHHHHHhcC-CcEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCCcEEE
Q 001902 187 VSDIVKDALSTFQ-QTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQSYCG 265 (998)
Q Consensus 187 ~~~~l~~ild~~~-d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~~~~~ 265 (998)
.+.+++.+-+... +.|+++|. +|..++... .+.+|+++.. ++ +..++ .|+.+..
T Consensus 43 l~~~~~~~~~~~~~~~i~v~d~---~G~~~~~~~----------~~~iG~~~~~---~~--------~~~al-~G~~~~~ 97 (142)
T 3by8_A 43 IQAIAEAVRKRNDLLFIVVTDM---QSLRYSHPE----------AQRIGQPFKG---DD--------ILKAL-NGEENVA 97 (142)
T ss_dssp HHHHHHHHHHHTTCSEEEEEET---TCBBSCCSS----------GGGTTSBCCC---GG--------GTGGG-GTCCEEE
T ss_pred HHHHHHHHHhhcCCcEEEEECC---CCcEEECCC----------hHHCCCcCCC---CC--------HHHHh-CCCeEEE
Confidence 3444554444433 47888998 665665432 4468876431 11 12233 4444433
Q ss_pred EEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhhH
Q 001902 266 RLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHTE 308 (998)
Q Consensus 266 e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk~ 308 (998)
.. ....|.. .....||++++|+++|++++..++.....
T Consensus 98 ~~--~~~~g~~---~~~~~PV~~~~g~viGvv~vg~~~~~~~~ 135 (142)
T 3by8_A 98 IN--RGFLAQA---LRVFTPIYDENHKQIGVVAIGLELSRVTQ 135 (142)
T ss_dssp EE--CSSSSCE---EEEEEEEECTTSCEEEEEEEEEEHHHHHH
T ss_pred Ee--cCccEEE---EEEEEeEEcCCCCEEEEEEEeEEHHHHHH
Confidence 21 2223322 23445999888999999999998865443
No 420
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=51.46 E-value=30 Score=37.36 Aligned_cols=53 Identities=19% Similarity=0.273 Sum_probs=40.9
Q ss_pred EEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHHcCC
Q 001902 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQNGQ 261 (998)
Q Consensus 202 i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~~g~ 261 (998)
++++|. +++|+.+...+.+++|.+.++++|+++..++++ .....+...+....
T Consensus 32 Ll~~~~---~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~~ 84 (327)
T 4e04_A 32 LLALAA---DMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEPG 84 (327)
T ss_dssp EEEECT---TCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSCS
T ss_pred EEEEcC---CCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhccc
Confidence 455553 888999999999999999999999998877653 34456666666543
No 421
>4e04_A Bacteriophytochrome (light-regulated signal trans histidine kinase), PHYB1; bacteriophytochrome chromophore binding domain; HET: LBV; 1.79A {Rhodopseudomonas palustris}
Probab=47.35 E-value=39 Score=36.51 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=40.6
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCCCCCHHHHHHHHHHHhcC
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIRAAIDNQ 543 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p~~~~~~~~~i~~~l~~g 543 (998)
-.++++|. +++|+.++..+..++|.+.++++|++...+.++ .....+...+...
T Consensus 30 G~Ll~~~~---~~~I~~~S~N~~~~lg~~~~~~lG~~l~~ll~~----~~~~~l~~~l~~~ 83 (327)
T 4e04_A 30 GLLLALAA---DMTIVAGSDNLPELTGLAIGALIGRSAADVFDS----ETHNRLTIALAEP 83 (327)
T ss_dssp SEEEEECT---TCBEEEEETTHHHHHSCCHHHHTTCBHHHHBCH----HHHHHHHHHHHSC
T ss_pred eEEEEEcC---CCeEEEEcccHHHHhCCChHhhcCCCHHHHcCH----HHHHHHHHHhhcc
Confidence 46677775 445999999999999999999999998777654 3344555665544
No 422
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=45.58 E-value=1.3e+02 Score=37.83 Aligned_cols=24 Identities=21% Similarity=0.392 Sum_probs=22.7
Q ss_pred ccCCCCcEEEecCCcEEEEeccCc
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+|=+++||||+.+|++.=+|||..
T Consensus 937 gDRH~~NILid~tG~v~HIDFG~~ 960 (1091)
T 3hhm_A 937 GDRHNSNIMVKDDGQLFHIDFGHF 960 (1091)
T ss_dssp CCCCTTTEEEETTSCEEECCCCCC
T ss_pred cCCCCcceEEeCCCCEEEEeehhh
Confidence 688999999999999999999987
No 423
>4ew7_A Conjugative transfer: regulation; alpha-beta-alpha structure, structural genomics, midwest CEN structural genomics (MCSG), PSI-biology; 1.67A {Salmonella enterica subsp}
Probab=45.11 E-value=31 Score=30.11 Aligned_cols=41 Identities=15% Similarity=0.272 Sum_probs=32.0
Q ss_pred cchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCC
Q 001902 185 PRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYT 228 (998)
Q Consensus 185 ~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys 228 (998)
++.---.+.+..++|..+.+-+.... |+|+|-+|.+||--+
T Consensus 16 nk~iL~iq~iY~nSPVpVCVRNq~Rk---ilYaN~aF~elF~Ke 56 (127)
T 4ew7_A 16 NKYILSIQDIYKNSPVPVCVRNQSRK---IIYANGAFIELFSKE 56 (127)
T ss_dssp HHHHHHHHHHHTTCSSCEEEECTTSC---EEEECHHHHHHTTSC
T ss_pred HHHHHhHHhhhcCCCccEEEecccce---EEEecchHHHHhhcc
Confidence 33334456788999999999988555 999999999996544
No 424
>3lif_A Putative diguanylate cyclase (ggdef) with PAS/PAC; PDC fold, signaling protein; HET: CIT; 2.70A {Rhodopseudomonas palustris}
Probab=44.75 E-value=1e+02 Score=31.03 Aligned_cols=97 Identities=11% Similarity=0.165 Sum_probs=57.7
Q ss_pred chHHHHHHHHHhcCC--cEEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCCCCChHHHHHHHHHHH--cCC
Q 001902 186 RVSDIVKDALSTFQQ--TFVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGAGTDPEDVAKIRETLQ--NGQ 261 (998)
Q Consensus 186 ~~~~~l~~ild~~~d--~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~~~~~~~~~~i~~~l~--~g~ 261 (998)
.....|+.+....+. .++++|. +|+ ++.+.. . ...|.++ .. ...+..++. .++
T Consensus 55 ~~~~~L~~~~~~~~~~~~i~i~d~---~G~-~~~s~~------~---~~~~~~~------~~----r~~f~~a~~~~~~~ 111 (254)
T 3lif_A 55 VFNERLRALADNLPQLSDVAILDA---DGQ-LTYASV------K---PVPALDN------SD----RSYFRYHRANDDHT 111 (254)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECT---TSB-EEEESS------S---SEECCBC------TT----SHHHHHHHHCCCCC
T ss_pred HHHHHHHHHHhcCCccceEEEECC---CCC-EecCCC------C---CCCCCCc------cc----HHHHHHHHhCCCCC
Confidence 345667777776664 6888888 888 443211 0 0111111 11 134555565 455
Q ss_pred cEEEEEEEEecCCCEEEEEeeeeEEeCCCCCEEEEEEEEecchhhh
Q 001902 262 SYCGRLLNYKKDGTPFWNLLTIAPIKDDEGKVLKFIGMQVEVSKHT 307 (998)
Q Consensus 262 ~~~~e~~~~~kdG~~~w~~~~~spi~d~~G~v~~~v~i~~DITerk 307 (998)
.+-.+...-...|. |+-....||.+.+|++.|++++..++....
T Consensus 112 ~~is~p~~~~~~g~--~~i~~~~pi~~~~g~~~Gvl~~~i~l~~l~ 155 (254)
T 3lif_A 112 LLITGPIQSRTSGV--WVFVVSRRLETTDGKFFGVVVATIESEYFS 155 (254)
T ss_dssp CEEEEEEECTTTCC--EEEEEEEEEECTTCCEEEEEEEEECHHHHH
T ss_pred eEECCceecCCCCc--EEEEEEeeeeCCCCCEeEEEEEEECHHHHH
Confidence 55555443344565 555677899998999999999998885443
No 425
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=34.05 E-value=22 Score=38.67 Aligned_cols=42 Identities=10% Similarity=0.044 Sum_probs=34.6
Q ss_pred ceEEEEcCCCCCCCEEEcCHHHHHHcCCChhhhcCCCCccccCC
Q 001902 483 KNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGP 526 (998)
Q Consensus 483 d~i~i~D~~G~d~~I~~vN~a~~~l~Gy~~eEliG~~~~~l~~p 526 (998)
-.++++|.. +++|+.++..+.+++|.+.++++|++...+.++
T Consensus 53 G~LL~l~~~--~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 53 GALLTADGH--SGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp SEEEEEETT--TCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred eEEEEEECC--CCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 456667753 445999999999999999999999998877765
No 426
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=27.95 E-value=60 Score=40.96 Aligned_cols=25 Identities=20% Similarity=0.381 Sum_probs=23.3
Q ss_pred ccCCCCcEEEecCCcEEEEeccCcc
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLSC 815 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a~ 815 (998)
+|=+++||||+.+|.+.=+|||.+.
T Consensus 940 GDRH~~NILid~tG~v~HIDFG~~f 964 (1092)
T 2y3a_A 940 GDRHSDNIMVKKTGQLFHIDFGHIL 964 (1092)
T ss_dssp CCCCTTTEEECTTSCEEECCCSCCS
T ss_pred CCCCCccEEEecCCCEEEEeehhhh
Confidence 7999999999999999999999873
No 427
>3s7o_A Bacteriophytochrome; biliverdin, PAS, GAF, photoreceptor, fluorescent protein; HET: LBV GOL; 1.24A {Deinococcus radiodurans} PDB: 3s7n_A* 3s7p_A* 3s7q_A* 2o9c_A* 2o9b_A* 1ztu_A*
Probab=27.64 E-value=28 Score=37.90 Aligned_cols=40 Identities=13% Similarity=0.118 Sum_probs=33.6
Q ss_pred EEEEecCCCCCceEEccHHHHHHcCCChhhhcCCCCCcccCC
Q 001902 202 FVVSDATKPDYPIMYASAGFFKMTGYTSKEVVGRNCRFLQGA 243 (998)
Q Consensus 202 i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEliG~~~~~l~~~ 243 (998)
++++|. .+++|+.+...+.+++|.+.++++|+++..++++
T Consensus 55 LL~l~~--~~~~I~~~S~N~~~~lg~~~~~llG~~l~~ll~~ 94 (343)
T 3s7o_A 55 LLTADG--HSGEVLQMSLNAATFLGQEPTVLRGQTLAALLPE 94 (343)
T ss_dssp EEEEET--TTCBEEEEETTHHHHHSSCHHHHTTCBHHHHSTT
T ss_pred EEEEEC--CCCEEEEEcccHHHHhCcChHHHcCCCHHHHHhH
Confidence 355553 2678999999999999999999999998887765
No 428
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=24.85 E-value=57 Score=40.53 Aligned_cols=24 Identities=21% Similarity=0.428 Sum_probs=22.8
Q ss_pred ccCCCCcEEEecCCcEEEEeccCc
Q 001902 791 RDLKPENVLLQGNGHVSLTDFDLS 814 (998)
Q Consensus 791 rDLkP~NILi~~~g~vkL~DFG~a 814 (998)
+|=+++||||+.+|.+.=+|||.+
T Consensus 788 gDRH~~NILid~tG~v~HIDFG~~ 811 (940)
T 2wxf_A 788 GDRHSDNIMIRESGQLFHIDFGHF 811 (940)
T ss_dssp CCCCGGGEEEETTSCEEECCCCCC
T ss_pred CCCCcccEEEecCCCEEEEeehhh
Confidence 799999999999999999999987
No 429
>3clo_A Transcriptional regulator; NP_811094.1, bacterial regulatory proteins, LUXR family, structural genomics; 2.04A {Bacteroides thetaiotaomicron vpi-5482}
Probab=22.72 E-value=4.4e+02 Score=26.71 Aligned_cols=47 Identities=15% Similarity=0.170 Sum_probs=36.3
Q ss_pred ccchHHHHHHHHHhcCCcEEEEecCCCCCceEEccHHHHHHcCCChhhh
Q 001902 184 LPRVSDIVKDALSTFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEV 232 (998)
Q Consensus 184 l~~~~~~l~~ild~~~d~i~i~D~~g~dG~I~~vN~a~~~l~Gys~eEl 232 (998)
+........+........++++|.. .+.+.|++.++..++||+.+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~l~D~~--~~~~~~~s~~~~~llG~~~~~~ 74 (258)
T 3clo_A 28 VEQHQQFVRSLTEVNGGCAVISDLS--NRKSYVTVHPWANFLGLTPEEA 74 (258)
T ss_dssp HHHHHHHHHHHHHHHSSEEEEEETT--TTEEEEEECTTCGGGCCCHHHH
T ss_pred HHHHHHHHHHHHHHcCCeEEEEEcC--CCeEEEEeCCHHHHhCCCcccc
Confidence 4444455555656667788999854 6779999999999999999988
No 430
>3eps_A Isocitrate dehydrogenase kinase/phosphatase; ATP-binding, glyoxylate bypass, nucleotide-binding, protein phosphatase; HET: AMP ATP; 2.80A {Escherichia coli O157} PDB: 3lcb_A* 3lc6_A*
Probab=22.01 E-value=6.8e+02 Score=28.71 Aligned_cols=137 Identities=18% Similarity=0.181 Sum_probs=92.6
Q ss_pred cCCCCceeEEEEEEccCCeEEEEEEeecccccChhH-HHHHHHHHHHHHhCCCCCccceeEEE-----------------
Q 001902 673 LGSGDTGSVHLVELCGSGQYFAMKAMDKGVMLNRNK-VHRACAEREILDMLDHPFVPALYASF----------------- 734 (998)
Q Consensus 673 LG~G~~g~Vy~a~~~~~~~~valK~i~~~~~~~~~~-~~~~~~E~~il~~l~h~nIv~l~~~~----------------- 734 (998)
+.-|--|.|-.+... .+-.++.|+++-.....++. ...+.....+.+ .|..|=++-+..
T Consensus 314 ~APGikGmVM~VFTL-PSf~~VFKvIKD~F~p~K~~tr~~Vk~KY~LVK--~hDRVGRMADT~Efsn~~fp~~Rfs~eLL 390 (578)
T 3eps_A 314 EAPGIRGMVMLVFTL-PGFDRVFKVIKDKFAPQKEMSAAHVRACYQLVK--EHDRVGRMADTQEFENFVLEKRHISPALM 390 (578)
T ss_dssp ECSSCCCSSEEEEEC-TTCSEEEEEECSSCCTTCCCCHHHHHHHHHHHH--TSCCTTTBCCCEEEEEEEEEGGGBCHHHH
T ss_pred ECCCCCceEEEEEcC-CCCceEEEEEccCCCCccccCHHHHHHHHHHHH--hhhhhhhhhhhhhhhcccCchhhCCHHHH
Confidence 578999999999874 45689999998654333222 222222333333 233332222111
Q ss_pred ------------eeCCeEE---EEEecCCCCchhHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCCCcEE
Q 001902 735 ------------QTKTHVC---LITDYCPGGELFLLLDRQPTKVLKEDAVRFYAAEVVVALEYLHCQGIIYRDLKPENVL 799 (998)
Q Consensus 735 ------------~~~~~~~---lV~E~~~ggsL~~~l~~~~~~~l~~~~~~~i~~qil~aL~~LH~~~IiHrDLkP~NIL 799 (998)
.+++.+. +.+|.- -..|.-+|.. -+.+++...+.+-..|++.|-..||.-||+-..|+=
T Consensus 391 ~EL~~~~ps~le~~gd~liIkHlYiERR-MtPLNLYL~~-----a~~~~~~~av~eYG~AIKqLAaANIFPGDML~KNFG 464 (578)
T 3eps_A 391 ELLLQEAAEKITDLGEQIVIRHLYIERR-MVPLNIWLEQ-----VEGQQLRDAIEEYGNAIRQLAAANIFPGDMLFKNFG 464 (578)
T ss_dssp HHHHHHSGGGEEEETTEEEEEEEEEEEC-CEEHHHHHHH-----CCTHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEE
T ss_pred HHHHHhCCccEEEcCCeeEeeeeeeecc-ccchhHHHhh-----CCHHHHHHHHHHHHHHHHHHHHhcCCCcccccccCC
Confidence 1223332 334433 4567777866 466788888999999999999999999999999999
Q ss_pred EecCCcEEEEeccCccccC
Q 001902 800 LQGNGHVSLTDFDLSCLTS 818 (998)
Q Consensus 800 i~~~g~vkL~DFG~a~~~~ 818 (998)
|+..|.|..-|+.--+.+.
T Consensus 465 VTRhgRVVFYDYDEI~ylT 483 (578)
T 3eps_A 465 VTRHGRVVFYDYDEICYMT 483 (578)
T ss_dssp ECTTCCEEECCGGGCEEST
T ss_pred ccccceEEEecccceeeec
Confidence 9999999999998776654
Done!