BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001908
(997 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 163 bits (413), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 241/543 (44%), Gaps = 81/543 (14%)
Query: 100 LRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLV 159
L ++++++NNF IP +G L+ L ++ N SG +S+C+ L N V
Sbjct: 199 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 257
Query: 160 GEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL--SIIYLHVGENQFSGTVPPSLYNM 217
G IP L+++SLA N TG +P + ++ L + N F G VPP +
Sbjct: 258 GPIPP---LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 314
Query: 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSN-ASNIEIIDLPI 276
S LE++ L N F+G LP+D + + L+V + N FSG +PES +N ++++ +DL
Sbjct: 315 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 374
Query: 277 NYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGV 336
N F+G + + +L + N G G L+NCS+L L N L G
Sbjct: 375 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGK----IPPTLSNCSELVSLHLSFNYLSGT 430
Query: 337 LPHSIANLST-----------------------TMTDIYMGVNQISGTIPSXXXXXXXXX 373
+P S+ +LS T+ + + N ++G IPS
Sbjct: 431 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 490
Query: 374 XXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGN 433
N+LTG IP+ IG+L NL + LS+N GNIP+ LG+ + L L++N G
Sbjct: 491 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 550
Query: 434 IPPSLGNCKNLVSLNLSDNK----------------------LIGAVPQQILTITT---- 467
IP ++ ++ N K G +Q+ ++T
Sbjct: 551 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 610
Query: 468 --LSR-----------------FLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIP 508
SR FLD+ N L+G +P E+G++ L L + N SG IP
Sbjct: 611 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 670
Query: 509 VTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEF--LENLSFLE 566
+ GL I + N G IP ++ +L + E+DLS NNLSG IPE E +
Sbjct: 671 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 730
Query: 567 YLN 569
+LN
Sbjct: 731 FLN 733
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 155/566 (27%), Positives = 255/566 (45%), Gaps = 70/566 (12%)
Query: 38 LLAIKSQLHDPLGVTNSWNNSINLCQWAGVTCGHRHQRVTELDLRHQ--NIG-GSLSPYV 94
L++ K L D + W+++ N C + GVTC R +VT +DL + N+G ++S +
Sbjct: 14 LISFKDVLPDK-NLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSL 70
Query: 95 GNLSFLRYINLATNNFHGEIPKEIGFL--FRLETLMLANNSFSGKIPT--NLSSCSNLLS 150
+L+ L + L+ ++ +G + GF L +L L+ NS SG + T +L SCS L
Sbjct: 71 LSLTGLESLFLSNSHINGSVS---GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 127
Query: 151 FVAYRNNLVGEIPEDI--GYSWLKLEHISLARNHLTG------MLPASIGNLSIIYLHVG 202
N L + P + G LE + L+ N ++G +L G L +L +
Sbjct: 128 LNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK--HLAIS 183
Query: 203 ENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPES 262
N+ SG V + +LE + + N F+ +P +G LQ I N SG +
Sbjct: 184 GNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LG-DCSALQHLDISGNKLSGDFSRA 239
Query: 263 FSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSK 322
S + ++++++ N F G + + LK
Sbjct: 240 ISTCTELKLLNISSNQFVGPIPPL--PLK------------------------------S 267
Query: 323 LKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXXXXXXXXXXXXXEFNQL 382
L+ L+ EN+ G +P ++ T+T + + N G +P N
Sbjct: 268 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 327
Query: 383 TGNIPRE-IGQLRNLQAIGLSSNFLQGNIPSSLGNLTL-MTDLFLSSNHLQGNIPPSLGN 440
+G +P + + ++R L+ + LS N G +P SL NL+ + L LSSN+ G I P+L
Sbjct: 328 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL-- 385
Query: 441 CKN----LVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVAL 496
C+N L L L +N G +P + + L L L N+L+G++P +G+L L L
Sbjct: 386 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS-LHLSFNYLSGTIPSSLGSLSKLRDL 444
Query: 497 YISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIP 556
+ N GEIP L LE + N G IP L + ++ + LS N L+G+IP
Sbjct: 445 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 504
Query: 557 EFLENLSFLEYLNLSYNHFDGEVPTK 582
+++ L L L LS N F G +P +
Sbjct: 505 KWIGRLENLAILKLSNNSFSGNIPAE 530
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 162 bits (411), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 155/543 (28%), Positives = 241/543 (44%), Gaps = 81/543 (14%)
Query: 100 LRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLV 159
L ++++++NNF IP +G L+ L ++ N SG +S+C+ L N V
Sbjct: 202 LEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFV 260
Query: 160 GEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL--SIIYLHVGENQFSGTVPPSLYNM 217
G IP L+++SLA N TG +P + ++ L + N F G VPP +
Sbjct: 261 GPIPP---LPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSC 317
Query: 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSN-ASNIEIIDLPI 276
S LE++ L N F+G LP+D + + L+V + N FSG +PES +N ++++ +DL
Sbjct: 318 SLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSS 377
Query: 277 NYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGV 336
N F+G + + +L + N G G L+NCS+L L N L G
Sbjct: 378 NNFSGPILPNLCQNPKNTLQELYLQNNGFTGK----IPPTLSNCSELVSLHLSFNYLSGT 433
Query: 337 LPHSIANLST-----------------------TMTDIYMGVNQISGTIPSXXXXXXXXX 373
+P S+ +LS T+ + + N ++G IPS
Sbjct: 434 IPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLN 493
Query: 374 XXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGN 433
N+LTG IP+ IG+L NL + LS+N GNIP+ LG+ + L L++N G
Sbjct: 494 WISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGT 553
Query: 434 IPPSLGNCKNLVSLNLSDNK----------------------LIGAVPQQILTITT---- 467
IP ++ ++ N K G +Q+ ++T
Sbjct: 554 IPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPC 613
Query: 468 --LSR-----------------FLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIP 508
SR FLD+ N L+G +P E+G++ L L + N SG IP
Sbjct: 614 NITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIP 673
Query: 509 VTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEF--LENLSFLE 566
+ GL I + N G IP ++ +L + E+DLS NNLSG IPE E +
Sbjct: 674 DEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAK 733
Query: 567 YLN 569
+LN
Sbjct: 734 FLN 736
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 154/566 (27%), Positives = 254/566 (44%), Gaps = 70/566 (12%)
Query: 38 LLAIKSQLHDPLGVTNSWNNSINLCQWAGVTCGHRHQRVTELDLRHQ--NIG-GSLSPYV 94
L++ K L D + W+++ N C + GVTC R +VT +DL + N+G ++S +
Sbjct: 17 LISFKDVLPDK-NLLPDWSSNKNPCTFDGVTC--RDDKVTSIDLSSKPLNVGFSAVSSSL 73
Query: 95 GNLSFLRYINLATNNFHGEIPKEIGFL--FRLETLMLANNSFSGKIPT--NLSSCSNLLS 150
+L+ L + L+ ++ +G + GF L +L L+ NS SG + T +L SCS L
Sbjct: 74 LSLTGLESLFLSNSHINGSVS---GFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKF 130
Query: 151 FVAYRNNLVGEIPEDI--GYSWLKLEHISLARNHLTG------MLPASIGNLSIIYLHVG 202
N L + P + G LE + L+ N ++G +L G L +L +
Sbjct: 131 LNVSSNTL--DFPGKVSGGLKLNSLEVLDLSANSISGANVVGWVLSDGCGELK--HLAIS 186
Query: 203 ENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPES 262
N+ SG V + +LE + + N F+ +P + LQ I N SG +
Sbjct: 187 GNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPFLGDCSA--LQHLDISGNKLSGDFSRA 242
Query: 263 FSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSK 322
S + ++++++ N F G + + LK
Sbjct: 243 ISTCTELKLLNISSNQFVGPIPPL--PLK------------------------------S 270
Query: 323 LKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXXXXXXXXXXXXXEFNQL 382
L+ L+ EN+ G +P ++ T+T + + N G +P N
Sbjct: 271 LQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330
Query: 383 TGNIPRE-IGQLRNLQAIGLSSNFLQGNIPSSLGNLTL-MTDLFLSSNHLQGNIPPSLGN 440
+G +P + + ++R L+ + LS N G +P SL NL+ + L LSSN+ G I P+L
Sbjct: 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNL-- 388
Query: 441 CKN----LVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVAL 496
C+N L L L +N G +P + + L L L N+L+G++P +G+L L L
Sbjct: 389 CQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVS-LHLSFNYLSGTIPSSLGSLSKLRDL 447
Query: 497 YISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIP 556
+ N GEIP L LE + N G IP L + ++ + LS N L+G+IP
Sbjct: 448 KLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIP 507
Query: 557 EFLENLSFLEYLNLSYNHFDGEVPTK 582
+++ L L L LS N F G +P +
Sbjct: 508 KWIGRLENLAILKLSNNSFSGNIPAE 533
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 114/351 (32%), Positives = 171/351 (48%), Gaps = 51/351 (14%)
Query: 649 RRRSKQESSISVPMEQ-------YFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILG 701
RR+ Q+ VP E+ S EL A++ FS+ N++G+G FG VYKG L
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 702 ENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759
+GT VAVK L Q G L+ F E E++ HRNL+++ C + + LV
Sbjct: 61 -DGTLVAVKRLKEERXQGGELQ-FQTEVEMISMAVHRNLLRLRGFCMT-----PTERLLV 113
Query: 760 YEYMQNGSLEEWLHQS-NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818
Y YM NGS+ L + QP L +R IA+ A + YLH HC P I+H D+K
Sbjct: 114 YPYMANGSVASCLRERPESQPP---LDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKA 170
Query: 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPC 878
+N+LLD + A V DFGLA+ + + ++GT+G++ P
Sbjct: 171 ANILLDEEFEAVVGDFGLAKLM-------DYKDXHVXXAVRGTIGHIAP----------- 212
Query: 879 LEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF---QGGLTLHEFCKMALPEKVMET 935
EY ++S DV+ GVMLLE+ T +R + + L ++ K L EK +E
Sbjct: 213 -EYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEA 271
Query: 936 -VDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985
VD L + D E + +I++ + C+ SP+ER +M +V+ L
Sbjct: 272 LVDVDLQGNYKD--------EEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 141 bits (356), Expect = 2e-33, Method: Composition-based stats.
Identities = 106/333 (31%), Positives = 157/333 (47%), Gaps = 64/333 (19%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAEC 727
S EL A++ F + N++G+G FG VYKG L + G VAVK L Q G L+ F E
Sbjct: 21 SLRELQVASDNFXNKNILGRGGFGKVYKGRLAD-GXLVAVKRLKEERTQGGELQ-FQTEV 78
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS-NGQPEVCDLSL 786
E++ HRNL+++ C + + LVY YM NGS+ L + QP L
Sbjct: 79 EMISMAVHRNLLRLRGFCMT-----PTERLLVYPYMANGSVASCLRERPESQPP---LDW 130
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+R IA+ A + YLH HC P I+H D+K +N+LLD + A V DFGLA+ +
Sbjct: 131 PKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM------ 184
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
+ ++G +G++ P EY ++S DV+ GVMLLE+ T
Sbjct: 185 -DYKDXHVXXAVRGXIGHIAP------------EYLSTGKSSEKTDVFGYGVMLLELITG 231
Query: 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTV------ 960
+R + ++A + VM LL W G + K E LV V
Sbjct: 232 QRA-----------FDLARLANDDDVM-------LLDWVKGLLKEKKLEALVDVDLQGNY 273
Query: 961 --------IRIGVACSMESPIERMEMRDVLAKL 985
I++ + C+ SP+ER +M +V+ L
Sbjct: 274 KDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 114 bits (285), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 156/336 (46%), Gaps = 43/336 (12%)
Query: 656 SSISVPMEQY-FPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL 714
SS VP E Y P+V +L EATN F +IG G FG VYKG+L +G VA+K
Sbjct: 18 SSYLVPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTP 73
Query: 715 MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ 774
++ F E E L RH +L+ +I C + L+Y+YM+NG+L+ L+
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYG 128
Query: 775 SNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834
S+ +S QRL I I A + YLH I+H D+K N+LLD + V ++DF
Sbjct: 129 SD--LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDF 183
Query: 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894
G+++ T ++ +KGT+GY+ P EY + + DVY
Sbjct: 184 GISK------KGTELDQTHLXXVVKGTLGYIDP------------EYFIKGRLTEKSDVY 225
Query: 895 SLGVMLLEMFTRRRP-TNCMFQGGLTLHEFCKMALPEKVMET-VDPSLLLAWSDGRRRAK 952
S GV+L E+ R + + + L E+ + +E VDP+L +D R
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL----ADKIR--- 278
Query: 953 VEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988
E L V C S +R M DVL KL A
Sbjct: 279 -PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (281), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 108/336 (32%), Positives = 155/336 (46%), Gaps = 43/336 (12%)
Query: 656 SSISVPMEQY-FPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL 714
SS VP E Y P+V +L EATN F +IG G FG VYKG+L +G VA+K
Sbjct: 18 SSYLVPFESYRVPLV---DLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTP 73
Query: 715 MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ 774
++ F E E L RH +L+ +I C + L+Y+YM+NG+L+ L+
Sbjct: 74 ESSQGIEEFETEIETLSFCRHPHLVSLIGFCDE-----RNEMILIYKYMENGNLKRHLYG 128
Query: 775 SNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834
S+ +S QRL I I A + YLH I+H D+K N+LLD + V ++DF
Sbjct: 129 SD--LPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDF 183
Query: 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894
G+++ T + +KGT+GY+ P EY + + DVY
Sbjct: 184 GISK------KGTELGQTHLXXVVKGTLGYIDP------------EYFIKGRLTEKSDVY 225
Query: 895 SLGVMLLEMFTRRRP-TNCMFQGGLTLHEFCKMALPEKVMET-VDPSLLLAWSDGRRRAK 952
S GV+L E+ R + + + L E+ + +E VDP+L +D R
Sbjct: 226 SFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNL----ADKIR--- 278
Query: 953 VEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988
E L V C S +R M DVL KL A
Sbjct: 279 -PESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYA 313
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 123/254 (48%), Gaps = 50/254 (19%)
Query: 666 FPMVSYSELSEATNEFSSS------NMIGQGSFGSVYKGILGENGTFVAVK----ILNLM 715
F S+ EL TN F N +G+G FG VYKG + N T VAVK ++++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDIT 69
Query: 716 QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ + F E +V+ +H NL++++ S G D LVY YM NGSL + L
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCL 124
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
+G P LS R IA A+ I +LH HH +H D+K +N+LLD A +SD
Sbjct: 125 DGTPP---LSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 176
Query: 834 FGLARF--LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891
FGLAR FA+ T M ++ I GT Y+ P + E +
Sbjct: 177 FGLARASEKFAQ---TVMXSR-----IVGTTAYMAPE-------------ALRGEITPKS 215
Query: 892 DVYSLGVMLLEMFT 905
D+YS GV+LLE+ T
Sbjct: 216 DIYSFGVVLLEIIT 229
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/254 (34%), Positives = 122/254 (48%), Gaps = 50/254 (19%)
Query: 666 FPMVSYSELSEATNEFSSS------NMIGQGSFGSVYKGILGENGTFVAVK----ILNLM 715
F S+ EL TN F N +G+G FG VYKG + N T VAVK ++++
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDIT 69
Query: 716 QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ + F E +V+ +H NL++++ S G D LVY YM NGSL + L
Sbjct: 70 TEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCL 124
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
+G P LS R IA A+ I +LH HH +H D+K +N+LLD A +SD
Sbjct: 125 DGTPP---LSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 176
Query: 834 FGLARF--LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891
FGLAR FA+ T M + I GT Y+ P + E +
Sbjct: 177 FGLARASEKFAQ---TVMXXR-----IVGTTAYMAPE-------------ALRGEITPKS 215
Query: 892 DVYSLGVMLLEMFT 905
D+YS GV+LLE+ T
Sbjct: 216 DIYSFGVVLLEIIT 229
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 119/252 (47%), Gaps = 46/252 (18%)
Query: 666 FPMVSYSELSEATNEFSSS------NMIGQGSFGSVYKGILGENGTFVAVK----ILNLM 715
F S+ EL TN F N +G+G FG VYKG + N T VAVK ++++
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDIT 63
Query: 716 QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ + F E +V+ +H NL++++ S G D LVY YM NGSL + L
Sbjct: 64 TEELKQQFDQEIKVMAKCQHENLVELLGFSSD----GDDL-CLVYVYMPNGSLLDRLSCL 118
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
+G P LS R IA A+ I +LH HH +H D+K +N+LLD A +SD
Sbjct: 119 DGTPP---LSWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 170
Query: 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDV 893
FGLAR + F + I GT Y+ P + E + D+
Sbjct: 171 FGLAR--ASEKFAQXVMXXR----IVGTTAYMAPE-------------ALRGEITPKSDI 211
Query: 894 YSLGVMLLEMFT 905
YS GV+LLE+ T
Sbjct: 212 YSFGVVLLEIIT 223
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 116/254 (45%), Gaps = 50/254 (19%)
Query: 666 FPMVSYSELSEATNEFSSS------NMIGQGSFGSVYKGILGENGTFVAVK----ILNLM 715
F S+ EL TN F N G+G FG VYKG + N T VAVK ++++
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV--NNTTVAVKKLAAMVDIT 60
Query: 716 QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ + F E +V +H NL++++ S G D LVY Y NGSL + L
Sbjct: 61 TEELKQQFDQEIKVXAKCQHENLVELLGFSSD----GDDL-CLVYVYXPNGSLLDRLSCL 115
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
+G P LS R IA A+ I +LH HH +H D+K +N+LLD A +SD
Sbjct: 116 DGTPP---LSWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISD 167
Query: 834 FGLARF--LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891
FGLAR FA+ S I GT Y P + E +
Sbjct: 168 FGLARASEKFAQXVXXSR--------IVGTTAYXAPE-------------ALRGEITPKS 206
Query: 892 DVYSLGVMLLEMFT 905
D+YS GV+LLE+ T
Sbjct: 207 DIYSFGVVLLEIIT 220
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 107/235 (45%), Gaps = 12/235 (5%)
Query: 380 NQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLG 439
N L G IP I +L L + ++ + G IP L + + L S N L G +PPS+
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 440 NCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYIS 499
+ NLV + N++ GA+P + + L + + N L G +P NL NL + +S
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 500 GNQFSGEIPVTLTGCTGLEIFHMQGNSFR---GSIPLSLRSLKSIKELDLSCNNLSGQIP 556
N G+ V + H+ NS G + LS K++ LDL N + G +P
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLS----KNLNGLDLRNNRIYGTLP 261
Query: 557 EFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGGSNELHLPSC 611
+ L L FL LN+S+N+ GE+P G N LCG LP+C
Sbjct: 262 QGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP----LPAC 312
Score = 90.5 bits (223), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 93/338 (27%), Positives = 139/338 (41%), Gaps = 61/338 (18%)
Query: 31 NETDRLALLAIKSQLHDPLGVTNSWNNSINLCQ--WAGVTCGHRHQ--RVTELDLRHQNI 86
N D+ ALL IK L +P ++ SW + + C W GV C Q RV LDL N+
Sbjct: 4 NPQDKQALLQIKKDLGNPTTLS-SWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNL 62
Query: 87 GGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCS 146
PY IP + L L L
Sbjct: 63 P---KPY-------------------PIPSSLANLPYLNFL------------------- 81
Query: 147 NLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGENQ 205
++ NNLVG IP I +L ++ + +++G +P + + +++ L N
Sbjct: 82 ----YIGGINNLVGPIPPAIA-KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNA 136
Query: 206 FSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSN 265
SGT+PPS+ ++ +L I D N +G +P G I N +G IP +F+N
Sbjct: 137 LSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFAN 196
Query: 266 ASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKV 325
N+ +DL N G S++FG KN + L N+L A DL V + N L
Sbjct: 197 L-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSL----AFDLGKVGLSKN---LNG 248
Query: 326 LAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP 363
L NR+ G LP + L + + + N + G IP
Sbjct: 249 LDLRNNRIYGTLPQGLTQLK-FLHSLNVSFNNLCGEIP 285
Score = 82.8 bits (203), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 116/267 (43%), Gaps = 41/267 (15%)
Query: 300 INNLGSGGANDLDFVTILTNCSKLKVLAFEE----NRLGGVLPHSIANLSTTMTDIYMGV 355
+NNL G N I ++ + L L F N L G +P +IA L T + +Y+
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL-TQLHYLYITH 110
Query: 356 NQISGTIPSXXXXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLG 415
+SG IP +N L+G +P I L NL I N + G IP S G
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 416 NLT-LMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDL 474
+ + L T + +S N L G IPP+ N LNL+ F+DL
Sbjct: 171 SFSKLFTSMTISRNRLTGKIPPTFAN------LNLA--------------------FVDL 204
Query: 475 GNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEI----FHMQGNSFRGS 530
N L G + G+ KN ++++ N + ++ G GL ++ N G+
Sbjct: 205 SRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-----GKVGLSKNLNGLDLRNNRIYGT 259
Query: 531 IPLSLRSLKSIKELDLSCNNLSGQIPE 557
+P L LK + L++S NNL G+IP+
Sbjct: 260 LPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 82/182 (45%), Gaps = 17/182 (9%)
Query: 458 VPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGL 517
+P + + L+ G N+L G +P + L L LYI+ SG IP L+ L
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTL 127
Query: 518 EIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFL-EYLNLSYNHFD 576
N+ G++P S+ SL ++ + N +SG IP+ + S L + +S N
Sbjct: 128 VTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLT 187
Query: 577 GEVPTKG-----VFSNKTRVQLTGNGKLCGGSN----ELHLPSCPSKRSRKSTVLRLGKV 627
G++P F + +R L G+ + GS+ ++HL ++ S LGKV
Sbjct: 188 GKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHL-------AKNSLAFDLGKV 240
Query: 628 GI 629
G+
Sbjct: 241 GL 242
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANN 132
+ + LDLR+ I G+L + L FL +N++ NN GEIP+ G L R + ANN
Sbjct: 244 KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANN 301
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 1/86 (1%)
Query: 79 LDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKI 138
+DL + G S G+ + I+LA N+ ++ K +G L L L NN G +
Sbjct: 202 VDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTL 260
Query: 139 PTNLSSCSNLLSFVAYRNNLVGEIPE 164
P L+ L S NNL GEIP+
Sbjct: 261 PQGLTQLKFLHSLNVSFNNLCGEIPQ 286
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/225 (31%), Positives = 108/225 (48%), Gaps = 33/225 (14%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+V++ +G+ VAVKIL + F+ E +++ RH N++ +
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ ++V EY+ GSL LH+S + + L +RL++A D+A + YLH
Sbjct: 103 VTQ-----PPNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNYLH 154
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
+ PPIVH +LK N+L+D V DFGL+R T SS GT +
Sbjct: 155 NR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRL--------KASTFLSSKSAAGTPEW 205
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ P E ++ DVYS GV+L E+ T ++P
Sbjct: 206 MAP------------EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 40 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 99
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 100 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 150
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 151 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 207
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 208 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 241
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 242 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 290
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 291 ELVSRISAIFSTFIGE 306
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 96 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 203
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 204 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 237
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 238 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 286
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 287 ELVSRISAIFSTFIGE 302
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 109/225 (48%), Gaps = 33/225 (14%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+V++ +G+ VAVKIL + F+ E +++ RH N++ +
Sbjct: 45 IGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ ++V EY+ GSL LH+S + + L +RL++A D+A + YLH
Sbjct: 103 VTQ-----PPNLSIVTEYLSRGSLYRLLHKSGAREQ---LDERRRLSMAYDVAKGMNYLH 154
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
+ PPIVH DLK N+L+D V DFGL+R L A F S GT +
Sbjct: 155 NR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAA-------GTPEW 205
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ P E ++ DVYS GV+L E+ T ++P
Sbjct: 206 MAP------------EVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 93 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 144 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 200
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 201 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 234
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 235 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 283
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 284 ELVSRISAIFSTFIGE 299
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 95 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 203 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 236
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 237 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 286 ELVSRISAIFSTFIGE 301
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 95 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 146 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK 202
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 203 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 236
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 237 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 286 ELVSRISAIFSTFIGE 301
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 685 NMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIK 740
+IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
++ +C + +V YM++G L ++ P V DL + + +A +
Sbjct: 155 LLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKGM 205
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
++L VH DL N +LD V+DFGLAR ++ + FD+ + + +K
Sbjct: 206 KFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKW 262
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
LE + + DV+S GV+L E+ TR P
Sbjct: 263 M----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP----------- 295
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
P + T D ++ L GRR + E C + + + C R +
Sbjct: 296 --------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSE 345
Query: 981 VLAKLCAARQTLVGR 995
+++++ A T +G
Sbjct: 346 LVSRISAIFSTFIGE 360
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 36 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 95
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 96 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 146
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+++L VH DL N +LD V+DFGLAR + + FD+ + + +K
Sbjct: 147 MKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK 203
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 204 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 237
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 238 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 286
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 287 ELVSRISAIFSTFIGE 302
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 128/257 (49%), Gaps = 41/257 (15%)
Query: 662 MEQYFPMVSYSELSEATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAV 709
M+ + ++ + +EA EF+ +IG G FG V G L G+ FVA+
Sbjct: 7 MKIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAI 66
Query: 710 KILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL 768
K L + + F++E ++ H N+I + V + + ++ E+M+NGSL
Sbjct: 67 KTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK-----STPVMIITEFMENGSL 121
Query: 769 EEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828
+ +L Q++GQ ++IQ + + +A+ ++YL VH DL N+L++ ++V
Sbjct: 122 DSFLRQNDGQ-----FTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLV 173
Query: 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888
VSDFGL+RFL DTS T +S++G K + + P I +Y + AS
Sbjct: 174 CKVSDFGLSRFLED---DTSDPTYTSALGGKIPIRWTAPEAI---------QYRKFTSAS 221
Query: 889 VTGDVYSLGVMLLEMFT 905
DV+S G+++ E+ +
Sbjct: 222 ---DVWSYGIVMWEVMS 235
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILN-LMQKGALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 54 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 113
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 114 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 164
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 165 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 221
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 222 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 255
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 256 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 304
Query: 980 DVLAKLCAARQTLVG 994
++++++ A T +G
Sbjct: 305 ELVSRISAIFSTFIG 319
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 53 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 112
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 113 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 163
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 164 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 220
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 221 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 254
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 255 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 303
Query: 980 DVLAKLCAARQTLVG 994
++++++ A T +G
Sbjct: 304 ELVSRISAIFSTFIG 318
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 95 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 203 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 236
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 237 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 286 ELVSRISAIFSTFIGE 301
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 87.0 bits (214), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 130/315 (41%), Gaps = 53/315 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 27 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 86
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 87 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 137
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 138 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 194
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 195 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 228
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 229 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 277
Query: 980 DVLAKLCAARQTLVG 994
++++++ A T +G
Sbjct: 278 ELVSRISAIFSTFIG 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 94 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 201
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 202 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 235
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 236 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 285 ELVSRISAIFSTFIGE 300
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 35 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 94
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 95 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 145
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 146 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 202
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 203 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 236
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 237 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 285
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 286 ELVSRISAIFSTFIGE 301
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 131/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 34 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 93
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 94 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 144
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR + +D + + G K
Sbjct: 145 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM----YDKEXXSVHNKTGAK 197
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
V ++ LE + + DV+S GV+L E+ TR P
Sbjct: 198 LPVKWM------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 235
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 236 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 284
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 285 ELVSRISAIFSTFIGE 300
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 30 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 89
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 90 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 140
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 141 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 197
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 198 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 231
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 232 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 280
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 281 ELVSRISAIFSTFIGE 296
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 33 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 92
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 93 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 143
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 144 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 200
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 201 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 234
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 235 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 283
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 284 ELVSRISAIFSTFIGE 299
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 684 SNMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLI 739
+ +IG+G FG VY G L +N AVK LN + G + F+ E ++++ H N++
Sbjct: 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVL 91
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
++ +C + +V YM++G L ++ P V DL + + +A
Sbjct: 92 SLLGIC----LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL-----IGFGLQVAKG 142
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++YL VH DL N +LD V+DFGLAR ++ + + + + + +K
Sbjct: 143 MKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK 199
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
LE + + DV+S GV+L E+ TR P
Sbjct: 200 WM----------------ALESLQTQKFTTKSDVWSFGVLLWELMTRGAP---------- 233
Query: 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979
P + T D ++ L GRR + E C + + + C R
Sbjct: 234 ---------PYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282
Query: 980 DVLAKLCAARQTLVGR 995
++++++ A T +G
Sbjct: 283 ELVSRISAIFSTFIGE 298
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 36/228 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECEVLRNTRHRN 737
+ + + +G G FG VY+G+ + VAVK L + M+ ++ F+ E V++ +H N
Sbjct: 12 DITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
L++++ VC+ + F ++ E+M G+L ++L + N Q ++S + L +A ++
Sbjct: 69 LVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
SA+EYL + +H DL N L+ + + V+DFGL+R + + +T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTXTAHAG 169
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 170 AKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.7 bits (208), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 36/241 (14%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFV 724
P +Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+
Sbjct: 2 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 58
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784
E V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EV 109
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
+ + L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 110 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---- 162
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+
Sbjct: 163 ---TGDTXTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIA 207
Query: 905 T 905
T
Sbjct: 208 T 208
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.0 bits (206), Expect = 3e-16, Method: Composition-based stats.
Identities = 61/241 (25%), Positives = 123/241 (51%), Gaps = 36/241 (14%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFV 724
P +Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+
Sbjct: 5 PSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFL 61
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784
E V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EV 112
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
+ + L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 113 NAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM---- 165
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+
Sbjct: 166 ---TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIA 210
Query: 905 T 905
T
Sbjct: 211 T 211
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 84.0 bits (206), Expect = 4e-16, Method: Composition-based stats.
Identities = 61/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 65
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 66 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAV 116
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 166
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 212
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 247 VVSEEPI------YIVTEYMSKGSLLDFLKGETGK----YLRLPQLVDMAAQIASGMAYV 296
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 297 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 346
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 347 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 247 VVSEEPI------YIVTEYMSKGSLLDFLKGETGK----YLRLPQLVDMAAQIASGMAYV 296
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 297 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 346
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 347 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 107/232 (46%), Gaps = 29/232 (12%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKII 742
+IG+G +G+VYKG L E VAVK+ + + ++F+ E + R H N+ + I
Sbjct: 19 ELIGRGRYGAVYKGSLDERP--VAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFI 73
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ G LV EY NGSL ++L H S+ + +A + +
Sbjct: 74 VGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSD---------WVSSCRLAHSVTRGL 124
Query: 801 EYLH------HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
YLH H +P I H DL NVL+ +D +SDFGL+ L E ++
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
+I GT+ Y+ P + +NL E + D+Y+LG++ E+F R
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQ-----VDMYALGLIYWEIFMR 231
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 83.6 bits (205), Expect = 5e-16, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 119/228 (52%), Gaps = 36/228 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECEVLRNTRHRN 737
+ + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E V++ +H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
L++++ VC+ + F ++ E+M G+L ++L + N Q ++S + L +A ++
Sbjct: 69 LVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
SA+EYL + +H DL N L+ + + V+DFGL+R + + +T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTXTAHAG 169
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 170 AKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 143/301 (47%), Gaps = 43/301 (14%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECE 728
Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 212 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAA 268
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQ 788
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q ++S +
Sbjct: 269 VMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVV 319
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTS 848
L +A ++SA+EYL + +H +L N L+ + + V+DFGL+R + +
Sbjct: 320 LLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------T 369
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT--- 905
+T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 370 GDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIATYGM 417
Query: 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAW----SDGRRRAKVEECLVTVI 961
P + Q L + +M PE E V + W SD A++ + T+
Sbjct: 418 SPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477
Query: 962 R 962
+
Sbjct: 478 Q 478
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 275 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 329
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 330 VVSEEPI------YIVTEYMSKGSLLDFLKGETGK----YLRLPQLVDMAAQIASGMAYV 379
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 380 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 429
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 430 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 462
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 83.2 bits (204), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 192 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 247 VVSEEPI------YIVGEYMSKGSLLDFLKGETGK----YLRLPQLVDMAAQIASGMAYV 296
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 297 ERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 346
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 347 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 379
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 83.2 bits (204), Expect = 8e-16, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 65
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 66 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 116
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 166
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 167 TGDTXTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 212
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 145/322 (45%), Gaps = 65/322 (20%)
Query: 682 SSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHR 736
+ +IG G FG VYKG+L G+ VA+K L + F+ E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 737 NLIKIITVCSSIDFKGADFKAL--VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
N+I++ V S +K + + EYM+NG+L+++L + +G+ S++Q + +
Sbjct: 107 NIIRLEGVISK-------YKPMMIITEYMENGALDKFLREKDGE-----FSVLQLVGMLR 154
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+A+ ++YL + VH DL N+L++ ++V VSDFGL+R L P E +
Sbjct: 155 GIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP-----EATYT 206
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRPTNCM 913
+ G K + + P I+ Y + AS DV+S G+++ E+ T RP
Sbjct: 207 TSGGKIPIRWTAPEAIS---------YRKFTSAS---DVWSFGIVMWEVMTYGERP---- 250
Query: 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI 973
L+ HE K A +DG R +C + ++ + C +
Sbjct: 251 -YWELSNHEVMK-----------------AINDGFRLPTPMDCPSAIYQLMMQCWQQERA 292
Query: 974 ERMEMRD---VLAKLCAARQTL 992
R + D +L KL A +L
Sbjct: 293 RRPKFADIVSILDKLIRAPDSL 314
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 65
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 66 AVMKEIKHPNLVQLLGVCT----REPPF-YIIIEFMTYGNLLDYLRECNRQ----EVNAV 116
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 166
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 61
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 62 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 112
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 113 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 162
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 163 TGDTYTAPAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 208
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 82.8 bits (203), Expect = 9e-16, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 62
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 63 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 113
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 114 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 163
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 164 TGDTYTAPAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 65
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 66 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 116
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 166
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 212
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 73
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 74 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 124
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 125 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 174
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 175 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 65
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 66 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 116
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 117 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 166
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 167 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 60
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 61 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 111
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 112 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 161
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 162 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 62
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 63 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 113
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 114 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 163
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 164 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 209
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 82.8 bits (203), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 122/238 (51%), Gaps = 36/238 (15%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAEC 727
+Y + + + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEA 62
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
V++ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ +
Sbjct: 63 AVMKEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAV 113
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
L +A ++SA+EYL + +H DL N L+ + + V+DFGL+R +
Sbjct: 114 VLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM------- 163
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ +T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 164 TGDTYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 209
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/228 (26%), Positives = 119/228 (52%), Gaps = 36/228 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKSFVAECEVLRNTRHRN 737
+ + + +G G +G VY+G+ + VAVK L + M+ ++ F+ E V++ +H N
Sbjct: 12 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTME---VEEFLKEAAVMKEIKHPN 68
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
L++++ VC+ + F ++ E+M G+L ++L + N Q ++S + L +A ++
Sbjct: 69 LVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVSAVVLLYMATQIS 119
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
SA+EYL + +H DL N L+ + + V+DFGL+R + + +T ++ G
Sbjct: 120 SAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------TGDTFTAHAG 169
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 170 AKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIAT 205
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVL 730
Y + + + + +G G +G VY+G+ + VAVK L ++ F+ E V+
Sbjct: 209 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 267
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ + L
Sbjct: 268 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVLL 318
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++SA+EYL + +H +L N L+ + + V+DFGL+R + + +
Sbjct: 319 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------TGD 368
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT---RR 907
T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 369 TYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIATYGMSP 416
Query: 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAW----SDGRRRAKVEECLVTVIR 962
P + Q L + +M PE E V + W SD A++ + T+ +
Sbjct: 417 YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 475
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 39/299 (13%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVL 730
Y + + + + +G G +G VY+G+ + VAVK L ++ F+ E V+
Sbjct: 251 YDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK-EDTMEVEEFLKEAAVM 309
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+ +H NL++++ VC+ + F ++ E+M G+L ++L + N Q +++ + L
Sbjct: 310 KEIKHPNLVQLLGVCT----REPPF-YIITEFMTYGNLLDYLRECNRQ----EVNAVVLL 360
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++SA+EYL + +H +L N L+ + + V+DFGL+R + + +
Sbjct: 361 YMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-------TGD 410
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT---RR 907
T ++ G K + + P ++A ++ S+ DV++ GV+L E+ T
Sbjct: 411 TYTAHAGAKFPIKWTAPESLAY------------NKFSIKSDVWAFGVLLWEIATYGMSP 458
Query: 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAW----SDGRRRAKVEECLVTVIR 962
P + Q L + +M PE E V + W SD A++ + T+ +
Sbjct: 459 YPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 517
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 19 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 73
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 74 VVSE------EPIYIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYV 123
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 124 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 173
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 174 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 206
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 16 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 70
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 71 VVSE------EPIXIVTEYMSKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYV 120
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + ++ G K +
Sbjct: 121 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKFPIK 170
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 171 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 203
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 115/225 (51%), Gaps = 32/225 (14%)
Query: 685 NMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIK 740
+IG G FG V G L G+ FVA+K L + + F++E ++ H N+I
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + + ++ E+M+NGSL+ +L Q++GQ ++IQ + + +A+ +
Sbjct: 73 LEGVVTK-----STPVMIITEFMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIAAGM 122
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
+YL VH L N+L++ ++V VSDFGL+RFL DTS T +S++G K
Sbjct: 123 KYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLED---DTSDPTYTSALGGKI 176
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + P I +Y + AS DV+S G+++ E+ +
Sbjct: 177 PIRWTAPEAI---------QYRKFTSAS---DVWSYGIVMWEVMS 209
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 108/229 (47%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
++ A+V ++ + SL LH S + E+ L ++IA A ++YLH
Sbjct: 89 STAPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D + DFGLA R+ + F+ + G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 184
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I + P S DVY+ G++L E+ T + P
Sbjct: 185 SILWMAPEVIRMQDSNPY---------SFQSDVYAFGIVLYELMTGQLP 224
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 32 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH S + E+ L ++IA A ++YLH
Sbjct: 89 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 137
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D + DFGLA R+ + F+ + G
Sbjct: 138 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 184
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I + P S DVY+ G++L E+ T + P
Sbjct: 185 SILWMAPEVIRMQDSNPY---------SFQSDVYAFGIVLYELMTGQLP 224
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 81.3 bits (199), Expect = 3e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 20 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 76
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH S + E+ L ++IA A ++YLH
Sbjct: 77 STKPQL------AIVTQWCEGSSLYHHLHASETKFEMKKL-----IDIARQTARGMDYLH 125
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D + DFGLA R+ + F+ + G
Sbjct: 126 AKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 172
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I + P S DVY+ G++L E+ T + P
Sbjct: 173 SILWMAPEVIRMQDSNPY---------SFQSDVYAFGIVLYELMTGQLP 212
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 15 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 69
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 70 VVSE------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 119
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 120 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 169
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 170 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 202
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 17 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 71
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 72 VVSE------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 121
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 122 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 171
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 172 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 204
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 80.9 bits (198), Expect = 3e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q ++++ +AS + Y+
Sbjct: 78 VVSE------EPIYIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYV 127
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 128 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 178 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 80.9 bits (198), Expect = 4e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLI-------EDNEXTARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 80.5 bits (197), Expect = 4e-15, Method: Composition-based stats.
Identities = 83/317 (26%), Positives = 140/317 (44%), Gaps = 64/317 (20%)
Query: 687 IGQGSFGSV-----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741
+G+G+FG V Y ++ VAVK L A K F E E+L N +H +++K
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--------NGQPEVC--DLSLIQRLN 791
VC D +V+EYM++G L ++L +GQP +L L Q L+
Sbjct: 83 YGVCGD-----GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA +AS + YL VH DL N L+ +++ + DFG++R +++ D
Sbjct: 138 IASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST--DYYRVG 192
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRPT 910
+ + I+ ++PP +I M + + DV+S GV+L E+FT ++P
Sbjct: 193 GHTMLPIR----WMPPESI------------MYRKFTTESDVWSFGVILWEIFTYGKQP- 235
Query: 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970
FQ T +V+E + + GR + C V + + C
Sbjct: 236 --WFQLSNT-----------EVIECI--------TQGRVLERPRVCPKEVYDVMLGCWQR 274
Query: 971 SPIERMEMRDVLAKLCA 987
P +R+ ++++ L A
Sbjct: 275 EPQQRLNIKEIYKILHA 291
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 42/236 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRN 737
+ + IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
++ + ++ A+V ++ + SL LH + E +I+ ++IA A
Sbjct: 66 ILLFMGYSTAPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTA 114
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQS 853
++YLH I+H DLK +N+ L D+ + DFGLA R+ + F+
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ------ 165
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ G++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 166 ----LSGSILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 35/242 (14%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAEC 727
SY EA+ E S IG GSFG+VYKG + VAVKIL ++ ++F E
Sbjct: 28 SYYWEIEAS-EVMLSTRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQFQAFRNEV 83
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
VLR TRH N++ + + D A+V ++ + SL + LH + +
Sbjct: 84 AVLRKTRHVNILLFMGYMTK------DNLAIVTQWCEGSSLYKHLH-----VQETKFQMF 132
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
Q ++IA A ++YLH I+H D+K +N+ L + + DFGLA +
Sbjct: 133 QLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLA--TVKSRWSG 187
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
S + + + G+V ++ P I N P S DVYS G++L E+ T
Sbjct: 188 SQQVEQPT----GSVLWMAPEVIRMQDNNPF---------SFQSDVYSYGIVLYELMTGE 234
Query: 908 RP 909
P
Sbjct: 235 LP 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.5 bits (197), Expect = 5e-15, Method: Composition-based stats.
Identities = 64/244 (26%), Positives = 121/244 (49%), Gaps = 40/244 (16%)
Query: 665 YFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL--NLMQKGALKS 722
YF + E+ + + + +G G +G VY G+ + VAVK L + M+ ++
Sbjct: 20 YFQSMDKWEMERT--DITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTME---VEE 74
Query: 723 FVAECEVLRNTRHRNLIKIITVCS-SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEV 781
F+ E V++ +H NL++++ VC+ F +V EYM G+L ++L + N +
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPF------YIVTEYMPYGNLLDYLRECNRE--- 125
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841
+++ + L +A ++SA+EYL + +H DL N L+ + V V+DFGL+R +
Sbjct: 126 -EVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLM- 180
Query: 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ +T ++ G K + + P ++A + S+ DV++ GV+L
Sbjct: 181 ------TGDTYTAHAGAKFPIKWTAPESLAY------------NTFSIKSDVWAFGVLLW 222
Query: 902 EMFT 905
E+ T
Sbjct: 223 EIAT 226
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 109/225 (48%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 193 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGNMSPEAFLQEAQVMKKLRHEKLVQLYA 247
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 248 VVSEEPI------YIVTEYMSKGSLLDFLKGEMGK----YLRLPQLVDMAAQIASGMAYV 297
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
VH DL+ +N+L+ ++V V+DFGL R + + ++ G K +
Sbjct: 298 ERMN---YVHRDLRAANILVGENLVCKVADFGLGRLIEDNEY-------TARQGAKFPIK 347
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 348 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 380
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 44/234 (18%)
Query: 687 IGQGSFGSV-----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741
+G+G+FG V Y ++ VAVK L A K F E E+L N +H +++K
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLH--------QSNGQPEVCDLSLIQRLNIA 793
VC D +V+EYM++G L ++L + G P +L+ Q L+IA
Sbjct: 81 YGVCVE-----GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT-ELTQSQMLHIA 134
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+A+ + YL VH DL N L+ +++ + DFG++R +++ T
Sbjct: 135 QQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYS--------TDY 183
Query: 854 SSIGIKGT--VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+G + ++PP +I M + + DV+SLGV+L E+FT
Sbjct: 184 YRVGGHTMLPIRWMPPESI------------MYRKFTTESDVWSLGVVLWEIFT 225
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 126
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 173
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 174 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 213
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRN 737
+ + IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N
Sbjct: 9 QITVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVN 65
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
++ + + A+V ++ + SL LH + E +I+ ++IA A
Sbjct: 66 ILLFMGYSTKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTA 114
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQS 853
++YLH I+H DLK +N+ L D+ + DFGLA R+ + F+
Sbjct: 115 QGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ------ 165
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ G++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 166 ----LSGSILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 208
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 21 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 77
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 78 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 126
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 127 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 173
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 174 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 213
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 16 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 73 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 121
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 122 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 168
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 169 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 208
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 36 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 92
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 93 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 141
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 142 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 188
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 189 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 228
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 18 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 74
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 75 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 123
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 124 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 170
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 171 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 149
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 196
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 197 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 236
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 80.1 bits (196), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 44 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 100
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 101 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 149
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 150 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ----------LSG 196
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 197 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 236
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 80.1 bits (196), Expect = 6e-15, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 23 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q ++++ +AS + Y+
Sbjct: 78 VVSE------EPIYIVTEYMNKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYV 127
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 128 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEW-------TARQGAKFPIK 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 178 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 210
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITV 744
IG GSFG+VYKG + VAVK+LN+ L++F E VLR TRH N++ +
Sbjct: 43 IGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 99
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ A+V ++ + SL LH + E +I+ ++IA A ++YLH
Sbjct: 100 STKPQL------AIVTQWCEGSSLYHHLHIIETKFE-----MIKLIDIARQTAQGMDYLH 148
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA----RFLFARPFDTSMETQSSSIGIKG 860
I+H DLK +N+ L D+ + DFGLA R+ + F+ + G
Sbjct: 149 AKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ----------LSG 195
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
++ ++ P I P S DVY+ G++L E+ T + P
Sbjct: 196 SILWMAPEVIRMQDKNPY---------SFQSDVYAFGIVLYELMTGQLP 235
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 79.7 bits (195), Expect = 7e-15, Method: Composition-based stats.
Identities = 65/225 (28%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM GSL ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 79 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 130
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 183
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 184 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 224
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 225 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 285 LALRVDQIRDNMAG 298
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 38/312 (12%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
VC S G L+ EY+ GSL ++L + + + I+ L + +EY
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEY 147
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L +H DL N+L++++ + DFGL + L P D + G
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESPIF 200
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHE 922
Y P E S+ SV DV+S GV+L E+FT + + E
Sbjct: 201 WYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAE 241
Query: 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982
F +M +K + + L+ + R + + C + I C + +R RD+
Sbjct: 242 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 301
Query: 983 AKLCAARQTLVG 994
++ R + G
Sbjct: 302 LRVDQIRDNMAG 313
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 128/297 (43%), Gaps = 49/297 (16%)
Query: 685 NMIGQGSFGSVYKGILG-ENGTF--VAVKILNL--MQKGALKSFVAECEVLRNTRHRNLI 739
++G+G FGSV +G L E+GT VAVK + L + ++ F++E +++ H N+I
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+++ VC + +G ++ +M+ G L +L S + + L L +D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+EYL + +H DL N +L DM V+DFGL++ +++
Sbjct: 160 MEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG---------------- 200
Query: 860 GTVGYVPPGNIAKM-LNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918
Y G IAKM + +E + DV++ GV + E+ TR G+
Sbjct: 201 ---DYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATR----GMTPYPGV 253
Query: 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
HE L G R + E+CL + I +C P++R
Sbjct: 254 QNHEMYDYLL-----------------HGHRLKQPEDCLDELYEIMYSCWRTDPLDR 293
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 21 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 81 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 132
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 133 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 185
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 186 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 226
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 227 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 286
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 287 LALRVDQIRDNMAG 300
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 76 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 127
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 180
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 181 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 221
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 282 LALRVDQIRDNMAG 295
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 23 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 83 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 135 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 187
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 188 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 228
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 229 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 288
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 289 LALRVDQIRDNMAG 302
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 76 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 127
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 180
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 181 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 221
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 282 LALRVDQIRDNMAG 295
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 16 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 76 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 127
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 128 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEF-FKVKEPGESP 180
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 181 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 221
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 222 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 281
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 282 LALRVDQIRDNMAG 295
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 47 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 107 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 158
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 159 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 211
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 212 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 252
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 253 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 312
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 313 LALRVDQIRDQMAG 326
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 20 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 80 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 131
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 132 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 184
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 185 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 225
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 226 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 285
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 286 LALRVDQIRDNMAG 299
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 122/243 (50%), Gaps = 41/243 (16%)
Query: 676 EATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKS 722
EA EF+ +IG G FG V +G L G+ + VA+K L + +
Sbjct: 4 EAVREFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRRE 63
Query: 723 FVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVC 782
F++E ++ H N+I++ V ++ + ++ E+M+NG+L+ +L ++GQ
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTN-----SMPVMILTEFMENGALDSFLRLNDGQ---- 114
Query: 783 DLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842
++IQ + + +AS + YL VH DL N+L++ ++V VSDFGL+RFL
Sbjct: 115 -FTVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE 170
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902
++S T++SS+G K + + P IA + + AS D +S G+++ E
Sbjct: 171 ---NSSDPTETSSLGGKIPIRWTAPEAIA---------FRKFTSAS---DAWSYGIVMWE 215
Query: 903 MFT 905
+ +
Sbjct: 216 VMS 218
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 22 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 82 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 133
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 134 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 186
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 187 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 227
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 228 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 287
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 288 LALRVDQIRDNMAG 301
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 14 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 74 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 125
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 126 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 178
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 179 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 219
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 220 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 279
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 280 LALRVDQIRDQMAG 293
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 79.3 bits (194), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM G L ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/312 (25%), Positives = 131/312 (41%), Gaps = 38/312 (12%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
VC S G L+ E++ GSL E+L + + + I+ L + +EY
Sbjct: 81 GVCYSA---GRRNLKLIMEFLPYGSLREYLQKHKER-----IDHIKLLQYTSQICKGMEY 132
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L +H DL N+L++++ + DFGL + L P D + G
Sbjct: 133 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESPIF 185
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHE 922
Y P E S+ SV DV+S GV+L E+FT + + E
Sbjct: 186 WYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPPAE 226
Query: 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982
F +M +K + + L+ + R + + C + I C + +R RD+
Sbjct: 227 FMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLA 286
Query: 983 AKLCAARQTLVG 994
++ R + G
Sbjct: 287 LRVDQIRDNMAG 298
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 130/314 (41%), Gaps = 38/314 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 19 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L Q + I+ L + +
Sbjct: 79 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYL-----QAHAERIDHIKLLQYTSQICKGM 130
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 131 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 183
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 184 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 224
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 225 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 284
Query: 981 VLAKLCAARQTLVG 994
+ ++ R + G
Sbjct: 285 LALRVDQIRDNMAG 298
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 79.0 bits (193), Expect = 1e-14, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+GQG FG V+ G NGT VA+K L + G + ++F+ E +V++ RH L+++
Sbjct: 26 LGQGCFGEVWMGTW--NGTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V S + +V EYM G L ++L G+ L L Q +++A +AS + Y+
Sbjct: 81 VVSE------EPIYIVTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYV 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL+ +N+L+ ++V V+DFGLAR + + ++ G K +
Sbjct: 131 E---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-------TARQGAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P E + ++ DV+S G++L E+ T+ R
Sbjct: 181 WTAP------------EAALYGRFTIKSDVWSFGILLTELTTKGR 213
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 76/316 (24%), Positives = 132/316 (41%), Gaps = 53/316 (16%)
Query: 683 SSNMIGQGSFGSVYKGIL---GENGTFVAVKILN-LMQKGALKSFVAECEVLRNTRHRNL 738
S +IG+G FG VY G +N A+K L+ + + +++F+ E ++R H N+
Sbjct: 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNV 84
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
+ +I I ++ YM +G L +++ P V DL ++ + +A
Sbjct: 85 LALI----GIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDL-----ISFGLQVAR 135
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+EYL + VH DL N +LD V+DFGLAR + R + + + + + + +
Sbjct: 136 GMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918
K T LE + DV+S GV+L E+ TR P
Sbjct: 193 KWTA----------------LESLQTYRFTTKSDVWSFGVLLWELLTRGAP--------- 227
Query: 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978
P + ++ D + LA GRR + E C ++ ++ C P R
Sbjct: 228 ----------PYRHIDPFDLTHFLA--QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTF 275
Query: 979 RDVLAKLCAARQTLVG 994
R ++ ++ L+G
Sbjct: 276 RVLVGEVEQIVSALLG 291
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++GA+ + F+ E EV+ H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHP 60
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV+E+M++G L ++L G + L + +D+
Sbjct: 61 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDV 110
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL C ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 111 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 160
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G K V + P E S S DV+S GV++ E+F+
Sbjct: 161 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFSE 198
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++GA+ + F+ E EV+ H
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHP 65
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV+E+M++G L ++L G L L + +D+
Sbjct: 66 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL C ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 116 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 165
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G K V + P E S S DV+S GV++ E+F+
Sbjct: 166 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFS 202
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++GA+ + F+ E EV+ H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHP 62
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV+E+M++G L ++L G L L + +D+
Sbjct: 63 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL C ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 113 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 162
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G K V + P E S S DV+S GV++ E+F+
Sbjct: 163 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFSE 200
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 15 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 75 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 126
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H DL N+L++++ + DFGL + L P D + G
Sbjct: 127 EYL---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESP 179
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P E S+ SV DV+S GV+L E+FT
Sbjct: 180 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 67/332 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVL-RNTR 734
N+ ++IG+G+FG V K + ++G + I + + K + F E EVL +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN----------GQPEVCDL 784
H N+I ++ C + +G + L EY +G+L ++L +S L
Sbjct: 75 HPNIINLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 129
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
S Q L+ A D+A ++YL Q +H DL N+L+ + VA ++DFGL+R
Sbjct: 130 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 180
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ +K T+G +P + + + L Y S + DV+S GV+L E+
Sbjct: 181 --------GQEVYVKKTMGRLP----VRWMAIESLNY---SVYTTNSDVWSYGVLLWEIV 225
Query: 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIG 964
+ C G+T E + LP+ G R K C V +
Sbjct: 226 SLGGTPYC----GMTCAELYE-KLPQ----------------GYRLEKPLNCDDEVYDLM 264
Query: 965 VACSMESPIERMEMRDVLA---KLCAARQTLV 993
C E P ER +L ++ R+T V
Sbjct: 265 RQCWREKPYERPSFAQILVSLNRMLEERKTYV 296
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 100/223 (44%), Gaps = 32/223 (14%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
VC S G L+ EY+ GSL ++L + + + I+ L + +EY
Sbjct: 96 GVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGMEY 147
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L +H DL N+L++++ + DFGL + L P D + G
Sbjct: 148 L---GTKRYIHRDLATRNILVENENRVKIGDFGLTKVL---PQDKEX-XKVKEPGESPIF 200
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P E S+ SV DV+S GV+L E+FT
Sbjct: 201 WYAP-------------ESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 139/332 (41%), Gaps = 67/332 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVL-RNTR 734
N+ ++IG+G+FG V K + ++G + I + + K + F E EVL +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN----------GQPEVCDL 784
H N+I ++ C + +G + L EY +G+L ++L +S L
Sbjct: 85 HPNIINLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 139
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
S Q L+ A D+A ++YL Q +H DL N+L+ + VA ++DFGL+R
Sbjct: 140 SSQQLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 190
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ +K T+G +P + + + L Y S + DV+S GV+L E+
Sbjct: 191 --------GQEVYVKKTMGRLP----VRWMAIESLNY---SVYTTNSDVWSYGVLLWEIV 235
Query: 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIG 964
+ C G+T E + LP+ G R K C V +
Sbjct: 236 SLGGTPYC----GMTCAELYE-KLPQ----------------GYRLEKPLNCDDEVYDLM 274
Query: 965 VACSMESPIERMEMRDVLA---KLCAARQTLV 993
C E P ER +L ++ R+T V
Sbjct: 275 RQCWREKPYERPSFAQILVSLNRMLEERKTYV 306
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 40/223 (17%)
Query: 687 IGQGSFGSVYKGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G FG V +LG+ G VAVK + ++F+AE V+ RH NL++++ V
Sbjct: 14 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 68
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
++ KG + +V EYM GSL ++L +S G+ + L L ++D+ A+EYL
Sbjct: 69 --VEEKGGLY--IVTEYMAKGSLVDYL-RSRGRSVLGGDCL---LKFSLDVCEAMEYLEG 120
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYV 865
+ VH DL NVL+ D VA VSDFGL + E S+ K V +
Sbjct: 121 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWT 166
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
P + + + S DV+S G++L E+++ R
Sbjct: 167 APEALRE------------KKFSTKSDVWSFGILLWEIYSFGR 197
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 78.2 bits (191), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 40/223 (17%)
Query: 687 IGQGSFGSVYKGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G FG V +LG+ G VAVK + ++F+AE V+ RH NL++++ V
Sbjct: 29 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 83
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
++ KG + +V EYM GSL ++L +S G+ + L L ++D+ A+EYL
Sbjct: 84 --VEEKGGLY--IVTEYMAKGSLVDYL-RSRGRSVLGGDCL---LKFSLDVCEAMEYLEG 135
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYV 865
+ VH DL NVL+ D VA VSDFGL + E S+ K V +
Sbjct: 136 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWT 181
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
P + + + S DV+S G++L E+++ R
Sbjct: 182 APEALRE------------KKFSTKSDVWSFGILLWEIYSFGR 212
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/223 (31%), Positives = 109/223 (48%), Gaps = 40/223 (17%)
Query: 687 IGQGSFGSVYKGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G FG V +LG+ G VAVK + ++F+AE V+ RH NL++++ V
Sbjct: 20 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 74
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
++ KG + +V EYM GSL ++L +S G+ + L L ++D+ A+EYL
Sbjct: 75 --VEEKGGLY--IVTEYMAKGSLVDYL-RSRGRSVLGGDCL---LKFSLDVCEAMEYLEG 126
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYV 865
+ VH DL NVL+ D VA VSDFGL + E S+ K V +
Sbjct: 127 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWT 172
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
P + + + S DV+S G++L E+++ R
Sbjct: 173 APEALRE------------AAFSTKSDVWSFGILLWEIYSFGR 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGLAR L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/316 (24%), Positives = 131/316 (41%), Gaps = 38/316 (12%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G+G+FGSV Y + G VAVK L + L+ F E E+L++ +H N++K
Sbjct: 17 QQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
VC S G L+ EY+ GSL ++L + + + I+ L + +
Sbjct: 77 YKGVCYSA---GRRNLKLIMEYLPYGSLRDYLQKHKER-----IDHIKLLQYTSQICKGM 128
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYL +H +L N+L++++ + DFGL + L P D + G
Sbjct: 129 EYL---GTKRYIHRNLATRNILVENENRVKIGDFGLTKVL---PQDKEY-YKVKEPGESP 181
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
Y P E S+ SV DV+S GV+L E+FT + +
Sbjct: 182 IFWYAP-------------ESLTESKFSVASDVWSFGVVLYELFT------YIEKSKSPP 222
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980
EF +M +K + + L+ + R + + C + I C + +R RD
Sbjct: 223 AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRD 282
Query: 981 VLAKLCAARQTLVGRL 996
+ ++ R + G
Sbjct: 283 LALRVDQIRDNMAGEF 298
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKIIT 743
IG+G+FG V+ G L + T VAVK LK+ F+ E +L+ H N++++I
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ K + +V E +Q G +L + V L L + D A+ +EYL
Sbjct: 180 VCTQ---KQPIY--IVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYL 229
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
C +H DL N L+ V +SDFG++R E G +
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----------EEADGVYAASGGLR 275
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
VP K L YG S S DV+S G++L E F+
Sbjct: 276 QVP----VKWTAPEALNYGRYSSES---DVWSFGILLWETFS 310
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 97/222 (43%), Gaps = 32/222 (14%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKIIT 743
IG+G+FG V+ G L + T VAVK LK+ F+ E +L+ H N++++I
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ K + +V E +Q G +L + V L L + D A+ +EYL
Sbjct: 180 VCTQ---KQPIY--IVMELVQGGDFLTFLRTEGARLRVKTL-----LQMVGDAAAGMEYL 229
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
C +H DL N L+ V +SDFG++R E G +
Sbjct: 230 ESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR-----------EEADGVXAASGGLR 275
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
VP K L YG S S DV+S G++L E F+
Sbjct: 276 QVP----VKWTAPEALNYGRYSSES---DVWSFGILLWETFS 310
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 40/220 (18%)
Query: 687 IGQGSFGSVYKGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G FG V +LG+ G VAVK + ++F+AE V+ RH NL++++ V
Sbjct: 201 IGKGEFGDV---MLGDYRGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVI 255
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
++ KG + +V EYM GSL ++L +S G+ + L L ++D+ A+EYL
Sbjct: 256 --VEEKGGLY--IVTEYMAKGSLVDYL-RSRGRSVLGGDCL---LKFSLDVCEAMEYLEG 307
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYV 865
+ VH DL NVL+ D VA VSDFGL + E S+ K V +
Sbjct: 308 N---NFVHRDLAARNVLVSEDNVAKVSDFGLTK-----------EASSTQDTGKLPVKWT 353
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
P + + + S DV+S G++L E+++
Sbjct: 354 APEALRE------------KKFSTKSDVWSFGILLWEIYS 381
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 122/241 (50%), Gaps = 41/241 (17%)
Query: 669 VSYSELSEATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFV 724
VSY ++ E +IG G FG V +G L G+ + VA+K L + + F+
Sbjct: 13 VSYVKIEE---------VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFL 63
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784
+E ++ H N+I++ V ++ + ++ E+M+NG+L+ +L ++GQ
Sbjct: 64 SEASIMGQFEHPNIIRLEGVVTN-----SMPVMILTEFMENGALDSFLRLNDGQ-----F 113
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
++IQ + + +AS + YL VH DL N+L++ ++V VSDFGL+RFL
Sbjct: 114 TVIQLVGMLRGIASGMRYLAEMS---YVHRDLAARNILVNSNLVCKVSDFGLSRFLEE-- 168
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
++S T +SS+G K + + P IA + + AS D +S G+++ E+
Sbjct: 169 -NSSDPTYTSSLGGKIPIRWTAPEAIA---------FRKFTSAS---DAWSYGIVMWEVM 215
Query: 905 T 905
+
Sbjct: 216 S 216
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 104/230 (45%), Gaps = 38/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++G++ F+ E EV+ H
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYW-LNKDKVAIKTI---KEGSMSEDDFIEEAEVMMKLSHP 82
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV+E+M++G L ++L G + L + +D+
Sbjct: 83 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGL-----FAAETLLGMCLDV 132
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL C ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 133 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 182
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G K V + P E S S DV+S GV++ E+F+
Sbjct: 183 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFSE 220
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 130/291 (44%), Gaps = 59/291 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G G FG V+ G N T VA+K L + G + +SF+ E ++++ +H L+++ V
Sbjct: 17 LGNGQFGEVWMGTWNGN-TKVAIKTL---KPGTMSPESFLEEAQIMKKLKHDKLVQLYAV 72
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
S +V EYM GSL ++L G+ L L +++A +A+ + Y+
Sbjct: 73 VSEEPI------YIVTEYMNKGSLLDFLKDGEGRA----LKLPNLVDMAAQVAAGMAYIE 122
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
+H DL+ +N+L+ + ++ ++DFGLAR + ++ G K + +
Sbjct: 123 RMN---YIHRDLRSANILVGNGLICKIADFGLARLI-------EDNEXTARQGAKFPIKW 172
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFC 924
P E + ++ DV+S G++L E+ T+ R + G+ E
Sbjct: 173 TAP------------EAALYGRFTIKSDVWSFGILLTELVTKGR----VPYPGMNNRE-- 214
Query: 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
V+E V+ G R ++C +++ + + C + P ER
Sbjct: 215 -------VLEQVE--------RGYRMPCPQDCPISLHELMIHCWKKDPEER 250
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 104/229 (45%), Gaps = 38/229 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++GA+ + F+ E EV+ H
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHP 63
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV E+M++G L ++L G L L + +D+
Sbjct: 64 KLVQLYGVC----LEQAPI-CLVTEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL C ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 114 CEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 163
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G K V + P E S S DV+S GV++ E+F+
Sbjct: 164 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFS 200
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 31 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 89
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 90 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 139
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 140 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 191
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 192 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 233
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 118/252 (46%), Gaps = 49/252 (19%)
Query: 670 SYSELSEATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQ 716
++ + ++A EF+ +IG G FG V G L G+ VA+K L
Sbjct: 11 TFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYT 70
Query: 717 KGALKSFVAECEVLRNTRHRNLIK---IITVCSSIDFKGADFKALVYEYMQNGSLEEWLH 773
+ F++E ++ H N+I ++T C + ++ EYM+NGSL+ +L
Sbjct: 71 DKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLR 122
Query: 774 QSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
+++G+ ++IQ + + + S ++YL VH DL N+L++ ++V VSD
Sbjct: 123 KNDGR-----FTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSD 174
Query: 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDV 893
FG++R L P E ++ G K + + P IA Y + AS DV
Sbjct: 175 FGMSRVLEDDP-----EAAYTTRGGKIPIRWTAPEAIA---------YRKFTSAS---DV 217
Query: 894 YSLGVMLLEMFT 905
+S G+++ E+ +
Sbjct: 218 WSYGIVMWEVMS 229
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 76.6 bits (187), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 73 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 122
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 123 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 174
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 175 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 139/332 (41%), Gaps = 67/332 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVL-RNTR 734
N+ ++IG+G+FG V K + ++G + I + + K + F E EVL +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN----------GQPEVCDL 784
H N+I ++ C + +G + L EY +G+L ++L +S L
Sbjct: 82 HPNIINLLGAC---EHRG--YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTL 136
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
S Q L+ A D+A ++YL Q +H +L N+L+ + VA ++DFGL+R
Sbjct: 137 SSQQLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR------ 187
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ +K T+G +P + + + L Y S + DV+S GV+L E+
Sbjct: 188 --------GQEVYVKKTMGRLP----VRWMAIESLNY---SVYTTNSDVWSYGVLLWEIV 232
Query: 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIG 964
+ C G+T E + LP+ G R K C V +
Sbjct: 233 SLGGTPYC----GMTCAELYE-KLPQ----------------GYRLEKPLNCDDEVYDLM 271
Query: 965 VACSMESPIERMEMRDVLA---KLCAARQTLV 993
C E P ER +L ++ R+T V
Sbjct: 272 RQCWREKPYERPSFAQILVSLNRMLEERKTYV 303
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 41 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 99
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 100 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 149
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 150 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 201
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 202 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 243
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 113/234 (48%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V EYM+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEYMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 105/229 (45%), Gaps = 38/229 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHR 736
+E + IG G FG V+ G N VA+K + ++GA+ + F+ E EV+ H
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHP 62
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
L+++ VC + A LV+E+M++G L ++L G L L + +D+
Sbjct: 63 KLVQLYGVC----LEQAPI-CLVFEFMEHGCLSDYLRTQRGLFAAETL-----LGMCLDV 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YL + ++H DL N L+ + V VSDFG+ RF+ + +SS
Sbjct: 113 CEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY-------TSST 162
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G K V + P E S S DV+S GV++ E+F+
Sbjct: 163 GTKFPVKWASP------------EVFSFSRYSSKSDVWSFGVLMWEVFS 199
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 43/282 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
E ++G+G+FG V K VA+K + + K+F+ E L H N++
Sbjct: 10 EIEVEEVVGRGAFGVVCKAKW--RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIV 65
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+ C + LV EY + GSL LH + P + ++ + +
Sbjct: 66 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEPLPY---YTAAHAMSWCLQCSQG 115
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ YLH ++H DLKP N+LL V + DFG T+ + Q+
Sbjct: 116 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----------TACDIQTHMTNN 164
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM----F 914
KG+ ++ P E GS S DV+S G++L E+ TRR+P + + F
Sbjct: 165 KGSAAWMAP------------EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWS-DGRRRAKVEE 955
+ +H + L + + + ++ + WS D +R +EE
Sbjct: 213 RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEE 254
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 71/282 (25%), Positives = 120/282 (42%), Gaps = 43/282 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
E ++G+G+FG V K VA+K + + K+F+ E L H N++
Sbjct: 9 EIEVEEVVGRGAFGVVCKAKW--RAKDVAIK--QIESESERKAFIVELRQLSRVNHPNIV 64
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+ C + LV EY + GSL LH + P + ++ + +
Sbjct: 65 KLYGAC-------LNPVCLVMEYAEGGSLYNVLHGAEPLPY---YTAAHAMSWCLQCSQG 114
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ YLH ++H DLKP N+LL V + DFG T+ + Q+
Sbjct: 115 VAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG-----------TACDIQTHMTNN 163
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM----F 914
KG+ ++ P E GS S DV+S G++L E+ TRR+P + + F
Sbjct: 164 KGSAAWMAP------------EVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWS-DGRRRAKVEE 955
+ +H + L + + + ++ + WS D +R +EE
Sbjct: 212 RIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEE 253
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 121/249 (48%), Gaps = 43/249 (17%)
Query: 670 SYSELSEATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQ 716
+Y + ++A +EF+ +IG G FG V G L G+ VA+K L +
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 717 KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN 776
+ + F+ E ++ H N+I + V + + +V EYM+NGSL+ +L +++
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTK-----SKPVMIVTEYMENGSLDTFLKKND 118
Query: 777 GQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
GQ ++IQ + + +++ ++YL VH DL N+L++ ++V VSDFGL
Sbjct: 119 GQ-----FTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGL 170
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
+R L P + + T+ I I+ T P IA + + AS DV+S
Sbjct: 171 SRVLEDDP-EAAYTTRGGKIPIRWTA----PEAIA---------FRKFTSAS---DVWSY 213
Query: 897 GVMLLEMFT 905
G+++ E+ +
Sbjct: 214 GIVMWEVVS 222
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K++ ++G++ F+ E +V+ N H L+++
Sbjct: 32 LGTGQFGVVKYGKW--RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 87 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 136
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + ++SS+G K V
Sbjct: 137 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLD-------DEETSSVGSKFPVR 186
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 187 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 114/246 (46%), Gaps = 49/246 (19%)
Query: 676 EATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKS 722
+A EF+ +IG G FG V G L G+ VA+K L +
Sbjct: 2 QAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRD 61
Query: 723 FVAECEVLRNTRHRNLIK---IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP 779
F++E ++ H N+I ++T C + ++ EYM+NGSL+ +L +++G+
Sbjct: 62 FLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDGR- 112
Query: 780 EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839
++IQ + + + S ++YL VH DL N+L++ ++V VSDFG++R
Sbjct: 113 ----FTVIQLVGMLRGIGSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRV 165
Query: 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
L P E ++ G K + + P IA Y + AS DV+S G++
Sbjct: 166 LEDDP-----EAAYTTRGGKIPIRWTAPEAIA---------YRKFTSAS---DVWSYGIV 208
Query: 900 LLEMFT 905
+ E+ +
Sbjct: 209 MWEVMS 214
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 684 SNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLI 739
+IG G FG V G L G+ VA+K L + F++E ++ H N+I
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 740 K---IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
++T C + ++ EYM+NGSL+ +L +++G+ ++IQ + + +
Sbjct: 73 HLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDGR-----FTVIQLVGMLRGI 119
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
S ++YL VH DL N+L++ ++V VSDFG++R L P E ++
Sbjct: 120 GSGMKYLSDMS---YVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDP-----EAAYTTR 171
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G K + + P IA Y + AS DV+S G+++ E+ +
Sbjct: 172 GGKIPIRWTAPEAIA---------YRKFTSAS---DVWSYGIVMWEVMS 208
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 126/288 (43%), Gaps = 30/288 (10%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILG-ENGTFV--AVKIL--NLMQKGALKSFVAECEVLRNT 733
+F+ M+G+G FGSV + L E+G+FV AVK+L +++ ++ F+ E ++
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 734 RHRNLIKIITVCSSIDFKGA-DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNI 792
H ++ K++ V KG ++ +M++G L +L S +L L +
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+D+A +EYL +H DL N +L DM V+DFGL+R ++
Sbjct: 143 MVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY----------- 188
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912
S +G +P K L L L + +V DV++ GV + E+ TR +
Sbjct: 189 SGDYYRQGCASKLP----VKWLALESLADNL---YTVHSDVWAFGVTMWEIMTRGQTPYA 241
Query: 913 MFQGGLTLHEFC---KMALPEKVMETVDPSLLLAWSDGRRRAKVEECL 957
+ + ++ P + ME V + WS ++ CL
Sbjct: 242 GIENAEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K++ ++G++ F+ E +V+ N H L+++
Sbjct: 32 LGTGQFGVVKYGKW--RGQYDVAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 86
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 87 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 136
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS+G K V
Sbjct: 137 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVR 186
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 187 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L G + E E+LRN H N++K
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
+C+ G + L+ E++ +GSL+E+L ++ + ++L Q+L A+ + ++
Sbjct: 89 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMD 140
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
YL VH DL NVL++ + + DFGL + + +T E +
Sbjct: 141 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-----ETDKEXXTVKDDRDSP 192
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
V + P CL M S+ + DV+S GV L E+ T
Sbjct: 193 VFWYAP---------ECL---MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 33/224 (14%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L G + E E+LRN H N++K
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
+C+ G + L+ E++ +GSL+E+L ++ + ++L Q+L A+ + ++
Sbjct: 77 KGICTE---DGGNGIKLIMEFLPSGSLKEYLPKNKNK-----INLKQQLKYAVQICKGMD 128
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
YL VH DL NVL++ + + DFGL + + +T E +
Sbjct: 129 YLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-----ETDKEXXTVKDDRDSP 180
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
V + P CL M S+ + DV+S GV L E+ T
Sbjct: 181 VFWYAP---------ECL---MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVA-ECEVLRNTRHRNLIKIIT 743
+G+GSFG V G VA+KI+N ++ K ++ + E LR RH ++IK+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V K D +V EY N L +++ Q + E Q++ SA+EY
Sbjct: 82 V-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 129
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H H IVH DLKP N+LLD + ++DFGL+ + F ++T G+
Sbjct: 130 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSC------GSPN 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y P I+ L G E DV+S GV+L M RR P +
Sbjct: 178 YAAPEVISGKLY-------AGPEV----DVWSCGVILYVMLCRRLPFD 214
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVA-ECEVLRNTRHRNLIKIIT 743
+G+GSFG V G VA+KI+N ++ K ++ + E LR RH ++IK+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V K D +V EY N L +++ Q + E Q++ SA+EY
Sbjct: 81 V-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 128
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H H IVH DLKP N+LLD + ++DFGL+ + F ++T G+
Sbjct: 129 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSC------GSPN 176
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y P I+ L G E DV+S GV+L M RR P +
Sbjct: 177 YAAPEVISGKLY-------AGPEV----DVWSCGVILYVMLCRRLPFD 213
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVA-ECEVLRNTRHRNLIKIIT 743
+G+GSFG V G VA+KI+N ++ K ++ + E LR RH ++IK+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V K D +V EY N L +++ Q + E Q++ SA+EY
Sbjct: 76 V-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 123
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H H IVH DLKP N+LLD + ++DFGL+ + F ++T G+
Sbjct: 124 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSC------GSPN 171
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y P I+ L G E DV+S GV+L M RR P +
Sbjct: 172 YAAPEVISGKLY-------AGPEV----DVWSCGVILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 104/228 (45%), Gaps = 38/228 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVA-ECEVLRNTRHRNLIKIIT 743
+G+GSFG V G VA+KI+N ++ K ++ + E LR RH ++IK+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V K D +V EY N L +++ Q + E Q++ SA+EY
Sbjct: 72 V-----IKSKDEIIMVIEYAGN-ELFDYIVQRDKMSEQEARRFFQQI------ISAVEYC 119
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H H IVH DLKP N+LLD + ++DFGL+ + F ++T G+
Sbjct: 120 HRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---LKTSC------GSPN 167
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y P I+ L G E DV+S GV+L M RR P +
Sbjct: 168 YAAPEVISGKLY-------AGPEV----DVWSCGVILYVMLCRRLPFD 204
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 14 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 72
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V E M+NGSL+ +L + + Q ++IQ +
Sbjct: 73 QFDHPNIIRLEGVVTK-----SKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVG 122
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 123 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 174
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 175 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 216
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V E M+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 112/234 (47%), Gaps = 35/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLR 731
+ATN S ++G G FG V G L + VA+K L + + + F+ E ++
Sbjct: 43 DATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMG 101
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+I++ V + + +V E M+NGSL+ +L + + Q ++IQ +
Sbjct: 102 QFDHPNIIRLEGVVTK-----SKPVMIVTEXMENGSLDSFLRKHDAQ-----FTVIQLVG 151
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +AS ++YL VH DL N+L++ ++V VSDFGL+R L P E
Sbjct: 152 MLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP-----EA 203
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ G K + + P IA Y + AS DV+S G++L E+ +
Sbjct: 204 AYTTRGGKIPIRWTSPEAIA---------YRKFTSAS---DVWSYGIVLWEVMS 245
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K ++++G++ F+ E +V+ N H L+++
Sbjct: 23 LGTGQFGVVKYGKW--RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 77
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 78 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 127
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS+G K V
Sbjct: 128 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVR 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 178 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K ++++G++ F+ E +V+ N H L+++
Sbjct: 16 LGTGQFGVVKYGKW--RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 70
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 71 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 120
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS+G K V
Sbjct: 121 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVR 170
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 171 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K ++++G++ F+ E +V+ N H L+++
Sbjct: 17 LGTGQFGVVKYGKW--RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 72 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 121
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS+G K V
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVR 171
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 172 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 72.8 bits (177), Expect = 8e-13, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K ++++G++ F+ E +V+ N H L+++
Sbjct: 12 LGTGQFGVVKYGKW--RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 66
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 67 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 116
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS+G K V
Sbjct: 117 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSVGSKFPVR 166
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 167 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 27 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 82 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 131
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + + T+ E G K +
Sbjct: 132 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE------GAKFPIK 181
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 182 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 214
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 31 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 85
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 86 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 135
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + + T+ E G K +
Sbjct: 136 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE------GAKFPIK 185
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 186 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 218
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 76 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 125
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + + T+ E G K +
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE------GAKFPIK 175
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 176 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 208
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 16 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 70
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 71 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 120
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + + T+ E G K +
Sbjct: 121 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE------GAKFPIK 170
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 171 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 203
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 72.8 bits (177), Expect = 9e-13, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 114/225 (50%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 26 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 80
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 81 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 130
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + + T+ E G K +
Sbjct: 131 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-TARE------GAKFPIK 180
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 181 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 213
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 69/289 (23%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G FG V+ G N T VAVK L ++++F+ E +++ +H L+++ V +
Sbjct: 21 LGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT 78
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ ++ EYM GSL ++L G + L + ++ + +A + Y+
Sbjct: 79 R-----EEPIYIITEYMAKGSLLDFLKSDEGG----KVLLPKLIDFSAQIAEGMAYIE-- 127
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
+ +H DL+ +NVL+ ++ ++DFGLAR + + T+ E G K + +
Sbjct: 128 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TARE------GAKFPIKWTA 179
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM 926
P + +N C ++ DV+S G++L E+ T + K+
Sbjct: 180 P----EAINFGCF--------TIKSDVWSFGILLYEIVT-----------------YGKI 210
Query: 927 ALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
P + + ++ A S G R +VE C + I C E ER
Sbjct: 211 PYPGR----TNADVMTALSQGYRMPRVENCPDELYDIMKMCWKEKAEER 255
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.4 bits (176), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 686 MIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKI 741
+IG G G V G L G+ VA+K L + + F++E ++ H N+I++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
V + +V EYM+NGSL+ +L +GQ +++Q + + + + +
Sbjct: 116 EGVVTR-----GRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGMR 165
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
YL VH DL NVL+D ++V VSDFGL+R L P D + T I I+ T
Sbjct: 166 YLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-DAAXTTTGGKIPIRWT 221
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
P IA + S AS DV+S GV++ E+
Sbjct: 222 A----PEAIA---------FRTFSSAS---DVWSFGVVMWEVL 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 67/223 (30%), Positives = 104/223 (46%), Gaps = 34/223 (15%)
Query: 686 MIGQGSFGSVYKGIL---GENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKI 741
+IG G G V G L G+ VA+K L + + F++E ++ H N+I++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
V + +V EYM+NGSL+ +L +GQ +++Q + + + + +
Sbjct: 116 EGVVTR-----GRLAMIVTEYMENGSLDTFLRTHDGQ-----FTIMQLVGMLRGVGAGMR 165
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
YL VH DL NVL+D ++V VSDFGL+R L P D + T I I+ T
Sbjct: 166 YLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP-DAAYTTTGGKIPIRWT 221
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
P IA + S AS DV+S GV++ E+
Sbjct: 222 A----PEAIA---------FRTFSSAS---DVWSFGVVMWEVL 248
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 67/321 (20%)
Query: 687 IGQGSFGSVY----KGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741
+G+G+FG V+ +L E + VAVK L + A + F E E+L +H+++++
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-------GQPEVC--DLSLIQRLNI 792
VC+ +G +V+EYM++G L +L G +V L L Q L +
Sbjct: 86 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 140
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
A +A+ + YL VH DL N L+ +V + DFG++R +++ T
Sbjct: 141 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS--------TD 189
Query: 853 SSSIGIKGT--VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRP 909
+G + + ++PP +I + + + DV+S GV+L E+FT ++P
Sbjct: 190 YYRVGGRTMLPIRWMPPESI------------LYRKFTTESDVWSFGVVLWEIFTYGKQP 237
Query: 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
+Q T E +D + GR + C V I C
Sbjct: 238 ---WYQLSNT--------------EAID-----CITQGRELERPRACPPEVYAIMRGCWQ 275
Query: 970 ESPIERMEMRDVLAKLCAARQ 990
P +R ++DV A+L A Q
Sbjct: 276 REPQQRHSIKDVHARLQALAQ 296
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 67/321 (20%)
Query: 687 IGQGSFGSVY----KGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741
+G+G+FG V+ +L E + VAVK L + A + F E E+L +H+++++
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-------GQPEVC--DLSLIQRLNI 792
VC+ +G +V+EYM++G L +L G +V L L Q L +
Sbjct: 80 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 134
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
A +A+ + YL VH DL N L+ +V + DFG++R +++ T
Sbjct: 135 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS--------TD 183
Query: 853 SSSIGIKGT--VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRP 909
+G + + ++PP +I + + + DV+S GV+L E+FT ++P
Sbjct: 184 YYRVGGRTMLPIRWMPPESI------------LYRKFTTESDVWSFGVVLWEIFTYGKQP 231
Query: 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
+Q T E +D + GR + C V I C
Sbjct: 232 ---WYQLSNT--------------EAID-----CITQGRELERPRACPPEVYAIMRGCWQ 269
Query: 970 ESPIERMEMRDVLAKLCAARQ 990
P +R ++DV A+L A Q
Sbjct: 270 REPQQRHSIKDVHARLQALAQ 290
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 72.0 bits (175), Expect = 1e-12, Method: Composition-based stats.
Identities = 82/321 (25%), Positives = 139/321 (43%), Gaps = 67/321 (20%)
Query: 687 IGQGSFGSVY----KGILGE-NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741
+G+G+FG V+ +L E + VAVK L + A + F E E+L +H+++++
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-------GQPEVC--DLSLIQRLNI 792
VC+ +G +V+EYM++G L +L G +V L L Q L +
Sbjct: 109 FGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAV 163
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
A +A+ + YL VH DL N L+ +V + DFG++R +++ T
Sbjct: 164 ASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYS--------TD 212
Query: 853 SSSIGIKGT--VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRP 909
+G + + ++PP +I + + + DV+S GV+L E+FT ++P
Sbjct: 213 YYRVGGRTMLPIRWMPPESI------------LYRKFTTESDVWSFGVVLWEIFTYGKQP 260
Query: 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
+Q T E +D + GR + C V I C
Sbjct: 261 ---WYQLSNT--------------EAID-----CITQGRELERPRACPPEVYAIMRGCWQ 298
Query: 970 ESPIERMEMRDVLAKLCAARQ 990
P +R ++DV A+L A Q
Sbjct: 299 REPQQRHSIKDVHARLQALAQ 319
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 29 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 83
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 84 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 133
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 134 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 183
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 184 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 27 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 81
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 82 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 131
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 132 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 181
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 182 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 214
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 76 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 125
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 175
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 176 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 208
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 30 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 84
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 85 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 134
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 135 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 184
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 185 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 217
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 21 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 76 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 125
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 175
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 176 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 208
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 22 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 76
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 77 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 126
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 127 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 176
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 177 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 209
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 72.0 bits (175), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/225 (26%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 23 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 77
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 78 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 127
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR + ++ G K +
Sbjct: 128 E---ERNYIHRDLRAANILVSDTLSCKIADFGLARLI-------EDNEXTAREGAKFPIK 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 178 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 210
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 125/266 (46%), Gaps = 43/266 (16%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIIT 743
+G G FG V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 17 LGAGQFGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 71
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 72 VVTQEPI------YIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 121
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H +L+ +N+L+ + ++DFGLAR + + ++ G K +
Sbjct: 122 EERN---YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEY-------TAREGAKFPIK 171
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR-PTNCMFQGGL--TL 920
+ P I YG ++ DV+S G++L E+ T R P M + L
Sbjct: 172 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL 219
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSD 946
+M P+ E + + L W +
Sbjct: 220 ERGYRMVRPDNCPEELYQLMRLCWKE 245
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 71/291 (24%), Positives = 129/291 (44%), Gaps = 59/291 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G G FG V+ ++ T VAVK M+ G++ ++F+AE V++ +H L+K+ V
Sbjct: 23 LGAGQFGEVWMATYNKH-TKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 78
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + ++ E+M GSL ++L G + L + ++ + +A + ++
Sbjct: 79 VTK------EPIYIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIE 128
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
Q +H DL+ +N+L+ +V ++DFGLAR + + T+ E G K + +
Sbjct: 129 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-TARE------GAKFPIKW 178
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFC 924
P I GS ++ DV+S G++L+E+ T R
Sbjct: 179 TAPEAI-----------NFGS-FTIKSDVWSFGILLMEIVTYGR---------------- 210
Query: 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
+P M +P ++ A G R + E C + I + C P ER
Sbjct: 211 ---IPYPGMS--NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 256
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFV----AVKILN-LMQKGALKSFVAECEVLRNTR 734
E ++G G+FG+VYKGI G V A+KILN A F+ E ++ +
Sbjct: 39 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 98
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
H +L++++ VC S + LV + M +G L E++H+ ++ LN +
Sbjct: 99 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKD-----NIGSQLLLNWCV 147
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+A + YL + +VH DL NVL+ ++DFGLAR L E + +
Sbjct: 148 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL------EGDEKEYN 198
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G +P K + L C+ Y + S DV+S GV + E+ T
Sbjct: 199 ADG-----GKMP----IKWMALECIHYRKFTHQS---DVWSYGVTIWELMT 237
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 67/231 (29%), Positives = 107/231 (46%), Gaps = 37/231 (16%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFV----AVKILN-LMQKGALKSFVAECEVLRNTR 734
E ++G G+FG+VYKGI G V A+KILN A F+ E ++ +
Sbjct: 16 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
H +L++++ VC S + LV + M +G L E++H+ ++ LN +
Sbjct: 76 HPHLVRLLGVCLSPTIQ------LVTQLMPHGCLLEYVHEHKD-----NIGSQLLLNWCV 124
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+A + YL + +VH DL NVL+ ++DFGLAR L E + +
Sbjct: 125 QIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLL------EGDEKEYN 175
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G +P K + L C+ Y + S DV+S GV + E+ T
Sbjct: 176 ADG-----GKMP----IKWMALECIHYRKFTHQS---DVWSYGVTIWELMT 214
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 127/291 (43%), Gaps = 59/291 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G G FG V+ ++ T VAVK M+ G++ ++F+AE V++ +H L+K+ V
Sbjct: 196 LGAGQFGEVWMATYNKH-TKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ ++ E+M GSL ++L G + L + ++ + +A + ++
Sbjct: 252 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIE 301
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
Q +H DL+ +N+L+ +V ++DFGLAR + + ++ G K + +
Sbjct: 302 ---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-------TAREGAKFPIKW 351
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFC 924
P I GS ++ DV+S G++L+E+ T R
Sbjct: 352 TAPEAI-----------NFGS-FTIKSDVWSFGILLMEIVTYGR---------------- 383
Query: 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
+P M +P ++ A G R + E C + I + C P ER
Sbjct: 384 ---IPYPGMS--NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 429
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 105/222 (47%), Gaps = 40/222 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VA+K ++++G++ F+ E +V+ N H L+++
Sbjct: 17 LGTGQFGVVKYGKW--RGQYDVAIK---MIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYG 71
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC+ + F ++ EYM NG L +L + + Q L + D+ A+EYL
Sbjct: 72 VCTK---QRPIF--IITEYMANGCLLNYLREMRHR-----FQTQQLLEMCKDVCEAMEYL 121
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+H DL N L++ V VSDFGL+R++ + +SS G K V
Sbjct: 122 E---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY-------TSSRGSKFPVR 171
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ PP E M S+ S D+++ GV++ E+++
Sbjct: 172 WSPP------------EVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 70.5 bits (171), Expect = 4e-12, Method: Composition-based stats.
Identities = 68/261 (26%), Positives = 122/261 (46%), Gaps = 44/261 (16%)
Query: 663 EQYFPMVSYSELSEATNEFSSS---------NMIGQGSFGSVYKGIL---GENGTFVAVK 710
+ Y +Y + + A ++F+ +IG G FG V G L G+ VA+K
Sbjct: 18 KTYIDPETYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIK 77
Query: 711 ILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLE 769
L + + + F+ E ++ H N++ + V + +G +V E+M+NG+L+
Sbjct: 78 TLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVT----RGKPV-MIVIEFMENGALD 132
Query: 770 EWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829
+L + +GQ ++IQ + + +A+ + YL VH DL N+L++ ++V
Sbjct: 133 AFLRKHDGQ-----FTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVC 184
Query: 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV 889
VSDFGL+R + P E ++ G K V + P I +Y + AS
Sbjct: 185 KVSDFGLSRVIEDDP-----EAVYTTTGGKIPVRWTAPEAI---------QYRKFTSAS- 229
Query: 890 TGDVYSLGVMLLEMFTR-RRP 909
DV+S G+++ E+ + RP
Sbjct: 230 --DVWSYGIVMWEVMSYGERP 248
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK---SFVAECEVLRNTRHRNLIKI 741
+ +G G+FG V G G VAVKILN + +L E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
V S+ DF +V EY+ G L +++ + E+ L Q++ SA++
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI------LSAVD 125
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
Y H H +VH DLKP NVLLD M A ++DFGL+ +
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 17/159 (10%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK---SFVAECEVLRNTRHRNLIKI 741
+ +G G+FG V G G VAVKILN + +L E + L+ RH ++IK+
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
V S+ DF +V EY+ G L +++ + E+ L Q++ SA++
Sbjct: 77 YQVIST----PTDF-FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQI------LSAVD 125
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
Y H H +VH DLKP NVLLD M A ++DFGL+ +
Sbjct: 126 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 161
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRH 735
++++F +G G++ +VYKG+ G +VA+K + L ++G + + E +++ +H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN--GQPEVCDLSLIQRLNIA 793
N++++ V + + LV+E+M N L++++ P +L+L++
Sbjct: 63 ENIVRLYDVIHT-----ENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ-- 114
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ + + H + I+H DLKP N+L++ + DFGL AR F + T S
Sbjct: 115 WQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL-----ARAFGIPVNTFS 166
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG-DVYSLGVMLLEMFT 905
S + T+ Y P + MGS T D++S G +L EM T
Sbjct: 167 SEV---VTLWYRAPDVL------------MGSRTYSTSIDIWSCGCILAEMIT 204
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 70.1 bits (170), Expect = 6e-12, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 39/243 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTR 734
AT+ + IG G++G+VYK +G FVA+K + + ++G S V E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 735 ---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN--GQPEVCDLSLIQR 789
H N+++++ VC++ LV+E++ L +L ++ G P L+++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
+D +LH +C IVH DLKP N+L+ ++DFGLAR
Sbjct: 121 FLRGLD------FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---------Y 162
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Q + + T+ Y P E + S + D++S+G + EMF RR+P
Sbjct: 163 SYQMALFPVVVTLWYRAP------------EVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
Query: 910 TNC 912
C
Sbjct: 210 LFC 212
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/291 (23%), Positives = 124/291 (42%), Gaps = 69/291 (23%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G G FG V+ ++ T VAVK M+ G++ ++F+AE V++ +H L+K+ V
Sbjct: 190 LGAGQFGEVWMATYNKH-TKVAVKT---MKPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ ++ E+M GSL ++L G + L + ++ + +A + ++
Sbjct: 246 VTKEPI------YIITEFMAKGSLLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIE 295
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
Q +H DL+ +N+L+ +V ++DFGLAR +G K + +
Sbjct: 296 ---QRNYIHRDLRAANILVSASLVCKIADFGLAR-----------------VGAKFPIKW 335
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFC 924
P I GS ++ DV+S G++L+E+ T R
Sbjct: 336 TAPEAI-----------NFGS-FTIKSDVWSFGILLMEIVTYGR---------------- 367
Query: 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
+P M +P ++ A G R + E C + I + C P ER
Sbjct: 368 ---IPYPGMS--NPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEER 413
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 9e-12, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 39/243 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTR 734
AT+ + IG G++G+VYK +G FVA+K + + ++G S V E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 735 ---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN--GQPEVCDLSLIQR 789
H N+++++ VC++ LV+E++ L +L ++ G P L+++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
+D +LH +C IVH DLKP N+L+ ++DFGLAR
Sbjct: 121 FLRGLD------FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI---------Y 162
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Q + + T+ Y P E + S + D++S+G + EMF RR+P
Sbjct: 163 SYQMALAPVVVTLWYRAP------------EVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
Query: 910 TNC 912
C
Sbjct: 210 LFC 212
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 67/243 (27%), Positives = 112/243 (46%), Gaps = 39/243 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTR 734
AT+ + IG G++G+VYK +G FVA+K + + ++G S V E +LR
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 735 ---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN--GQPEVCDLSLIQR 789
H N+++++ VC++ LV+E++ L +L ++ G P L+++
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
+D +LH +C IVH DLKP N+L+ ++DFGLAR + M
Sbjct: 121 FLRGLD------FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI-----YSYQM 166
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ T+ Y P E + S + D++S+G + EMF RR+P
Sbjct: 167 ALDPVVV----TLWYRAP------------EVLLQSTYATPVDMWSVGCIFAEMF-RRKP 209
Query: 910 TNC 912
C
Sbjct: 210 LFC 212
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 139/331 (41%), Gaps = 66/331 (19%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKII 742
IG+G +G V+ G G VAVK+ ++ S+ E E+ + RH N++ I
Sbjct: 43 KQIGKGRYGEVWMGKW--RGEKVAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFI 97
Query: 743 TVCSSIDFKGADFKALVY---EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ D KG +Y +Y +NGSL ++L + L L +A S
Sbjct: 98 ----AADIKGTGSWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSG 146
Query: 800 IEYLHHHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+ +LH +P I H DLK N+L+ + ++D GLA + + + +
Sbjct: 147 LCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTR 206
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+PP + + LN ++ + D+YS G++L E+ R C+
Sbjct: 207 V----GTKRYMPPEVLDESLNRNHF------QSYIMADMYSFGLILWEVARR-----CV- 250
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRR-------------RAKVEECLVTVI 961
GG+ + E+ LP + DPS + D R R +ECL +
Sbjct: 251 SGGI-VEEY---QLPYHDLVPSDPS----YEDMREIVCIKKLRPSFPNRWSSDECLRQMG 302
Query: 962 RIGVACSMESPIER---MEMRDVLAKLCAAR 989
++ C +P R + ++ LAK+ ++
Sbjct: 303 KLMTECWAHNPASRLTALRVKKTLAKMSESQ 333
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 113/244 (46%), Gaps = 52/244 (21%)
Query: 687 IGQGSFGSVYK----GILG-ENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIK 740
IG+G+FG V++ G+L E T VAVK+L +++ F E ++ + N++K
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS--------------- 785
++ VC+ L++EYM G L E+L +S VC LS
Sbjct: 115 LLGVCAV-----GKPMCLLFEYMAYGDLNEFL-RSMSPHTVCSLSHSDLSTRARVSSPGP 168
Query: 786 ----LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841
++L IA +A+ + YL VH DL N L+ +MV ++DFGL+R ++
Sbjct: 169 PPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ D + +I I+ ++PP +I + + DV++ GV+L
Sbjct: 226 SA--DYYKADGNDAIPIR----WMPPESI------------FYNRYTTESDVWAYGVVLW 267
Query: 902 EMFT 905
E+F+
Sbjct: 268 EIFS 271
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 68.6 bits (166), Expect = 2e-11, Method: Composition-based stats.
Identities = 66/234 (28%), Positives = 110/234 (47%), Gaps = 46/234 (19%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKIITVC 745
+G FG V+K L + FVAVKI L K +S+ +E E+ +H NL++ I
Sbjct: 24 ARGRFGCVWKAQLMND--FVAVKIFPLQDK---QSWQSEREIFSTPGMKHENLLQFI--- 75
Query: 746 SSIDFKGADFKA---LVYEYMQNGSLEEWLHQSN-GQPEVCDLSLIQRLNIAIDMASAIE 801
+ + +G++ + L+ + GSL ++L + E+C ++A M+ +
Sbjct: 76 -AAEKRGSNLEVELWLITAFHDKGSLTDYLKGNIITWNELC--------HVAETMSRGLS 126
Query: 802 YLHHHC--------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDTSMETQ 852
YLH +P I H D K NVLL D+ A ++DFGLA RF +P
Sbjct: 127 YLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKP-------P 179
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
+ G GT Y+ P + +N +A + D+Y++G++L E+ +R
Sbjct: 180 GDTHGQVGTRRYMAPEVLEGAINFQ-------RDAFLRIDMYAMGLVLWELVSR 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 19/222 (8%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITV 744
++G+G FG K E G + +K L + ++F+ E +V+R H N++K I V
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGV 75
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+K + EY++ G+L + + Q QR++ A D+AS + YLH
Sbjct: 76 L----YKDKRLN-FITEYIKGGTLRGIIKSMDSQ-----YPWSQRVSFAKDIASGMAYLH 125
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGY 864
I+H DL N L+ + V+DFGLAR + T E S Y
Sbjct: 126 SMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDE--KTQPEGLRSLKKPDRKKRY 180
Query: 865 VPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
GN M P + G + V DV+S G++L E+ R
Sbjct: 181 TVVGNPYWM--APEMINGRSYDEKV--DVFSFGIVLCEIIGR 218
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 107/234 (45%), Gaps = 27/234 (11%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRH 735
+++F +++G+G++G V G VA+K + K AL++ + E ++L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N+I I + F+ + ++ E MQ LH+ + D IQ
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD-DHIQYF--IYQ 120
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET--QS 853
A++ LH ++H DLKPSN+L++ + V DFGLAR + D S T QS
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
+ T Y P ML ++ S DV+S G +L E+F RR
Sbjct: 178 GMVEFVATRWYRAP---EVMLT--------SAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 68.2 bits (165), Expect = 2e-11, Method: Composition-based stats.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 40/225 (17%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALK--SFVAECEVLRNTRHRNLIKIIT 743
+G G G V+ G NG T VAVK L ++G++ +F+AE +++ +H+ L+++
Sbjct: 21 LGAGQAGEVWMGYY--NGHTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYA 75
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + ++ EYM+NGSL ++L +G L++ + L++A +A + ++
Sbjct: 76 VVTQ------EPIYIITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFI 125
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ +H DL+ +N+L+ + ++DFGLAR L T+ E G K +
Sbjct: 126 E---ERNYIHRDLRAANILVSDTLSCKIADFGLAR-LIEDAEXTARE------GAKFPIK 175
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ P I YG ++ DV+S G++L E+ T R
Sbjct: 176 WTAPEAI---------NYGT---FTIKSDVWSFGILLTEIVTHGR 208
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---------NLMQKGALKSFVAEC 727
A NE IG+G FG V+KG L ++ + VA+K L +++K + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREV 74
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
++ N H N++K+ + + +V E++ G L H+ + S+
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV- 123
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL-----DHDMVAHVSDFGLARFLFA 842
+L + +D+A IEY+ + PPIVH DL+ N+ L + + A V+DFG
Sbjct: 124 -KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------- 174
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT--GDVYSLGVML 900
TS ++ S G+ G ++ P I E S T D YS ++L
Sbjct: 175 ----TSQQSVHSVSGLLGNFQWMAPETIG------------AEEESYTEKADTYSFAMIL 218
Query: 901 LEMFTRRRPTNCMFQGGLTL-----HEFCKMALPEKVMETVDPSLLLAWS-DGRRR 950
+ T P + G + E + +PE + + L WS D ++R
Sbjct: 219 YTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 102/229 (44%), Gaps = 38/229 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVL-RNTR 734
++F +IG+GSFG V F AVK+L +++K K ++E VL +N +
Sbjct: 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVK 97
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
H L+ + F+ AD V +Y+ G L L Q E C L R A
Sbjct: 98 HPFLVGL-----HFSFQTADKLYFVLDYINGGELFYHL-----QRERCFLEPRARF-YAA 146
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ASA+ YLH IV+ DLKP N+LLD ++DFGL + ++E S+
Sbjct: 147 EIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCK--------ENIEHNST 195
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P + K T D + LG +L EM
Sbjct: 196 TSTFCGTPEYLAPEVLHK------------QPYDRTVDWWCLGAVLYEM 232
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 67.4 bits (163), Expect = 4e-11, Method: Composition-based stats.
Identities = 66/289 (22%), Positives = 127/289 (43%), Gaps = 54/289 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G FG V+ G N T VAVK L ++++F+ E +++ +H L+++ V +
Sbjct: 20 LGAGQFGEVWMGYY-NNSTKVAVKTLKPGTM-SVQAFLEEANLMKTLQHDKLVRLYAVVT 77
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ ++ E+M GSL ++L G + L + ++ + +A + Y+
Sbjct: 78 K-----EEPIYIITEFMAKGSLLDFLKSDEGG----KVLLPKLIDFSAQIAEGMAYIE-- 126
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
+ +H DL+ +NVL+ ++ ++DFGLAR + + T+ E G K + +
Sbjct: 127 -RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY-TARE------GAKFPIKWTA 178
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM 926
P + +N C ++ +V+S G++L E+ T + K+
Sbjct: 179 P----EAINFGCF--------TIKSNVWSFGILLYEIVT-----------------YGKI 209
Query: 927 ALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
P + + ++ A S G R ++E C + I C E ER
Sbjct: 210 PYPGR----TNADVMSALSQGYRMPRMENCPDELYDIMKMCWKEKAEER 254
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 124/296 (41%), Gaps = 60/296 (20%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---------NLMQKGALKSFVAEC 727
A NE IG+G FG V+KG L ++ + VA+K L +++K + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREV 74
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
++ N H N++K+ + + +V E++ G L H+ + S+
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV- 123
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL-----DHDMVAHVSDFGLARFLFA 842
+L + +D+A IEY+ + PPIVH DL+ N+ L + + A V+DFGL
Sbjct: 124 -KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL------ 175
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT--GDVYSLGVML 900
S ++ S G+ G ++ P I E S T D YS ++L
Sbjct: 176 -----SQQSVHSVSGLLGNFQWMAPETIG------------AEEESYTEKADTYSFAMIL 218
Query: 901 LEMFTRRRPTNCMFQGGLTL-----HEFCKMALPEKVMETVDPSLLLAWS-DGRRR 950
+ T P + G + E + +PE + + L WS D ++R
Sbjct: 219 YTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 81/159 (50%), Gaps = 17/159 (10%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK---SFVAECEVLRNTRHRNLIKI 741
+ +G G+FG V G G VAVKILN + +L E + L+ RH ++IK+
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKL 81
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
V S+ +D +V EY+ G L +++ ++ E L Q++ S ++
Sbjct: 82 YQVIST----PSDI-FMVMEYVSGGELFDYICKNGRLDEKESRRLFQQI------LSGVD 130
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
Y H H +VH DLKP NVLLD M A ++DFGL+ +
Sbjct: 131 YCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMM 166
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 111/268 (41%), Gaps = 40/268 (14%)
Query: 661 PMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK---ILNLMQK 717
P + P + Y+ L+ F IG+G F VY+ +G VA+K I +LM
Sbjct: 18 PQKALRPDMGYNTLAN----FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 718 GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNG 777
A + E ++L+ H N+IK F + +V E G L +
Sbjct: 74 KARADCIKEIDLLKQLNHPNVIKYYA-----SFIEDNELNIVLELADAGDLSRMIKHFKK 128
Query: 778 QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
Q + + + + + SA+E++H ++H D+KP+NV + V + D GL
Sbjct: 129 QKRLIPERTVWKY--FVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLG 183
Query: 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897
RF +S T + S+ GT Y+ P I E G + D++SLG
Sbjct: 184 RFF------SSKTTAAHSLV--GTPYYMSPERIH--------ENGY----NFKSDIWSLG 223
Query: 898 VMLLEMFTRRRPTNCMFQGGLTLHEFCK 925
+L EM + P + + L+ CK
Sbjct: 224 CLLYEMAALQSP---FYGDKMNLYSLCK 248
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 67.0 bits (162), Expect = 6e-11, Method: Composition-based stats.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 42/248 (16%)
Query: 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK-----SFVAECEV 729
S AT+ + IG G++G+VYK +G FVA+K + + G S V E +
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 730 LRNTR---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN--GQPEVCDL 784
LR H N+++++ VC++ LV+E++ L +L ++ G P
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIK 123
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
L+++ +D +LH +C IVH DLKP N+L+ ++DFGLAR
Sbjct: 124 DLMRQFLRGLD------FLHANC---IVHRDLKPENILVTSGGTVKLADFGLARI----- 169
Query: 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
Q + + T+ Y P E + S + D++S+G + EMF
Sbjct: 170 ----YSYQMALTPVVVTLWYRAP------------EVLLQSTYATPVDMWSVGCIFAEMF 213
Query: 905 TRRRPTNC 912
RR+P C
Sbjct: 214 -RRKPLFC 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRH 735
+++F +++G+G++G V G VA+K + K AL++ + E ++L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N+I I + F+ + ++ E MQ LH+ + D IQ
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD-DHIQYF--IYQ 120
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET--QS 853
A++ LH ++H DLKPSN+L++ + V DFGLAR + D S T QS
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T Y P ML ++ S DV+S G +L E+F RR
Sbjct: 178 GMTEXVATRWYRAP---EVMLT--------SAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 39/259 (15%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGI-LGENGTFVAVKILNLM--QKGALKSFVAECEVL 730
L A ++ IG+G++G V+K L G FVA+K + + ++G S + E VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 731 RNTR---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
R+ H N++++ VC+ LV+E++ L +L + +P V ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVP-EPGVPTETI- 122
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
++ + +++LH H +VH DLKP N+L+ ++DFGLAR
Sbjct: 123 --KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY------- 170
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
S + +S+ + T+ Y P E + S + D++S+G + EMF RR
Sbjct: 171 SFQMALTSVVV--TLWYRAP------------EVLLQSSYATPVDLWSVGCIFAEMF-RR 215
Query: 908 RPTNCMFQGGLTLHEFCKM 926
+P +F+G + + K+
Sbjct: 216 KP---LFRGSSDVDQLGKI 231
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 39/259 (15%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGI-LGENGTFVAVKILNLM--QKGALKSFVAECEVL 730
L A ++ IG+G++G V+K L G FVA+K + + ++G S + E VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 731 RNTR---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
R+ H N++++ VC+ LV+E++ L +L + +P V ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVP-EPGVPTETI- 122
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
++ + +++LH H +VH DLKP N+L+ ++DFGLAR
Sbjct: 123 --KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY------- 170
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
S + +S+ + T+ Y P E + S + D++S+G + EMF RR
Sbjct: 171 SFQMALTSVVV--TLWYRAP------------EVLLQSSYATPVDLWSVGCIFAEMF-RR 215
Query: 908 RPTNCMFQGGLTLHEFCKM 926
+P +F+G + + K+
Sbjct: 216 KP---LFRGSSDVDQLGKI 231
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 67/259 (25%), Positives = 121/259 (46%), Gaps = 39/259 (15%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGI-LGENGTFVAVKILNLM--QKGALKSFVAECEVL 730
L A ++ IG+G++G V+K L G FVA+K + + ++G S + E VL
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 731 RNTR---HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
R+ H N++++ VC+ LV+E++ L +L + +P V ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVP-EPGVPTETI- 122
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
++ + +++LH H +VH DLKP N+L+ ++DFGLAR
Sbjct: 123 --KDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY------- 170
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
S + +S+ + T+ Y P E + S + D++S+G + EMF RR
Sbjct: 171 SFQMALTSVVV--TLWYRAP------------EVLLQSSYATPVDLWSVGCIFAEMF-RR 215
Query: 908 RPTNCMFQGGLTLHEFCKM 926
+P +F+G + + K+
Sbjct: 216 KP---LFRGSSDVDQLGKI 231
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 106/234 (45%), Gaps = 27/234 (11%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRH 735
+++F +++G+G++G V G VA+K + K AL++ + E ++L++ +H
Sbjct: 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRT-LREIKILKHFKH 68
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N+I I + F+ + ++ E MQ LH+ + D IQ
Sbjct: 69 ENIITIFNIQRPDSFENFNEVYIIQELMQTD-----LHRVISTQMLSD-DHIQYF--IYQ 120
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET--QS 853
A++ LH ++H DLKPSN+L++ + V DFGLAR + D S T QS
Sbjct: 121 TLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T Y P ML ++ S DV+S G +L E+F RR
Sbjct: 178 GMTEYVATRWYRAP---EVMLT--------SAKYSRAMDVWSCGCILAELFLRR 220
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 110/229 (48%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R ++ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----------ET 183
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 184 AYYRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 225
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 73/287 (25%), Positives = 125/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E AS + D+++LG ++ ++ P
Sbjct: 191 ANSFVGTAQYVSP------------ELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 239 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 281
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 120/266 (45%), Gaps = 46/266 (17%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNT 733
E F IG+G++G VYK G VA+K + L +G + + E +L+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLN 791
H N++K++ V + + LV+E++ L++++ S G P L LI+ +
Sbjct: 67 NHPNIVKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--S 114
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ + + H H ++H DLKP N+L++ + ++DFGL AR F + T
Sbjct: 115 YLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRT 166
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
+ + T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 167 YTHEV---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR---- 208
Query: 912 CMFQGGLTLHE----FCKMALPEKVM 933
+F G + + F + P++V+
Sbjct: 209 ALFPGDSEIDQLFRIFRTLGTPDEVV 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----------DIXET 183
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 184 DXXRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 225
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R + +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----------DIXET 183
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 184 DXXRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 225
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 108/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 79
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 80 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 134
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R + +
Sbjct: 135 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR-----------DIXET 180
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 181 DXXRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 222
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R ++ +
Sbjct: 138 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----------ET 183
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 184 DYYRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 225
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 81
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 82 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 136
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH DL N ++ HD + DFG+ R ++ +
Sbjct: 137 EIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY-----------ET 182
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 183 DYYRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 224
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 113 LQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 66 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 165
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 166 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 207
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 208 DSEIDQLFRIFRTLGTPDEVV 228
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 201
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 69 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 116
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 117 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 168
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 169 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 205
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 163
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 164 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 200
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 163
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 164 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 200
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 36/228 (15%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIIT 743
+G G +VY IL A+ I ++ LK F E H+N++ +I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMID 78
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V D LV EY++ +L E++ +S+G LS+ +N + I++
Sbjct: 79 VDEE-----DDCYYLVMEYIEGPTLSEYI-ESHGP-----LSVDTAINFTNQILDGIKHA 127
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H IVH D+KP N+L+D + + DFG+A+ L +TS+ TQ++ + GTV
Sbjct: 128 HDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKAL----SETSL-TQTNH--VLGTVQ 177
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y P E G D+YS+G++L EM P N
Sbjct: 178 YFSP------------EQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 65.5 bits (158), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 86/173 (49%), Gaps = 24/173 (13%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL------NLMQKGALKSFVAECEV 729
++ ++ + ++G+GS+G V K + G VA+K +++K A++ E ++
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMR----EIKL 77
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQR 789
L+ RH NL+ ++ VC K LV+E++ + L++ NG D ++Q+
Sbjct: 78 LKQLRHENLVNLLEVC-----KKKKRWYLVFEFVDHTILDDLELFPNG----LDYQVVQK 128
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842
I + I + H H I+H D+KP N+L+ V + DFG AR L A
Sbjct: 129 YLFQI--INGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKDFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 123/296 (41%), Gaps = 60/296 (20%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---------NLMQKGALKSFVAEC 727
A NE IG+G FG V+KG L ++ + VA+K L +++K + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEK--FQEFQREV 74
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
++ N H N++K+ + + +V E++ G L H+ + S+
Sbjct: 75 FIMSNLNHPNIVKLYGLMHNP-------PRMVMEFVPCGDL---YHRLLDKAHPIKWSV- 123
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL-----DHDMVAHVSDFGLARFLFA 842
+L + +D+A IEY+ + PPIVH DL+ N+ L + + A V+DF L
Sbjct: 124 -KLRLMLDIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL------ 175
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT--GDVYSLGVML 900
S ++ S G+ G ++ P I E S T D YS ++L
Sbjct: 176 -----SQQSVHSVSGLLGNFQWMAPETIG------------AEEESYTEKADTYSFAMIL 218
Query: 901 LEMFTRRRPTNCMFQGGLTL-----HEFCKMALPEKVMETVDPSLLLAWS-DGRRR 950
+ T P + G + E + +PE + + L WS D ++R
Sbjct: 219 YTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N+FS +IG+G FG VY + G A+K L+ K +K E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSL 245
Query: 739 IKI----ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+ VC S F D + + + M G L L Q +G D+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFY-----AA 299
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ +E++H+ +V+ DLKP+N+LLD +SD GLA D S + +
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKPHA 349
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S+ GT GY+ P L+ G+ ++S D +SLG ML ++ P
Sbjct: 350 SV---GTHGYMAP---------EVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N+FS +IG+G FG VY + G A+K L+ K +K E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSL 245
Query: 739 IKI----ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+ VC S F D + + + M G L L Q +G D+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFY-----AA 299
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ +E++H+ +V+ DLKP+N+LLD +SD GLA D S + +
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKPHA 349
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S+ GT GY+ P L+ G+ ++S D +SLG ML ++ P
Sbjct: 350 SV---GTHGYMAP---------EVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 9 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 68
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 69 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 116
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 117 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 168
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 169 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 210
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 211 DSEIDQLFRIFRTLGTPDEVV 231
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N+FS +IG+G FG VY + G A+K L+ K +K E L +L
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSL 245
Query: 739 IKI----ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+ VC S F D + + + M G L L Q +G D+ A
Sbjct: 246 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFY-----AA 299
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ +E++H+ +V+ DLKP+N+LLD +SD GLA D S + +
Sbjct: 300 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKPHA 349
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S+ GT GY+ P L+ G+ ++S D +SLG ML ++ P
Sbjct: 350 SV---GTHGYMAP---------EVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 390
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 91 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 188
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 189 ANAFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 237 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 279
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 104/239 (43%), Gaps = 36/239 (15%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVL 730
+ E +F N++G+GSF VY+ G VA+K+++ + + G ++ E ++
Sbjct: 6 IGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+H +++++ F+ +++ LV E NG + +L + V S +
Sbjct: 66 CQLKHPSILELYNY-----FEDSNYVYLVLEMCHNGEMNRYL-----KNRVKPFSENEAR 115
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+ + + + YLH H I+H DL SN+LL +M ++DFGLA L P +
Sbjct: 116 HFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQL-KMPHE---- 167
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT Y+ P E S + DV+SLG M + R P
Sbjct: 168 ---KHYTLCGTPNYISP------------EIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 102/235 (43%), Gaps = 37/235 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N+FS +IG+G FG VY + G A+K L+ K +K E L +L
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD---KKRIKMKQGETLALNERIMLSL 244
Query: 739 IKI----ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+ VC S F D + + + M G L L Q +G D+ A
Sbjct: 245 VSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQ-HGVFSEADMRFY-----AA 298
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ +E++H+ +V+ DLKP+N+LLD +SD GLA D S + +
Sbjct: 299 EIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKPHA 348
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S+ GT GY+ P L+ G+ ++S D +SLG ML ++ P
Sbjct: 349 SV---GTHGYMAP---------EVLQKGVAYDSS--ADWFSLGCMLFKLLRGHSP 389
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 66 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 165
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 166 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 207
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 208 DSEIDQLFRIFRTLGTPDEVV 228
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 67 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 114
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 166
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 167 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 208
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 209 DSEIDQLFRIFRTLGTPDEVV 229
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 67 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 114
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 166
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 167 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 208
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 209 DSEIDQLFRIFRTLGTPDEVV 229
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 67 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 114
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 166
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 167 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 208
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 209 DSEIDQLFRIFRTLGTPDEVV 229
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 66 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 165
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 166 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 207
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 208 DSEIDQLFRIFRTLGTPDEVV 228
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 90 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 136
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 137 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 187
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 188 ANSFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 236 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 278
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 94 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 140
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 141 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 191
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 192 ANSFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 240 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 282
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 65.1 bits (157), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 42/223 (18%)
Query: 687 IGQGSFGSVYKGILGENGTF-VAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIIT 743
+G G FG V G G + VAVK ++++G++ F E + + H L+K
Sbjct: 16 LGSGQFGVVKLGKW--KGQYDVAVK---MIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYG 70
Query: 744 VCSSIDFKGADFKA-LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
VCS ++ +V EY+ NG L +L +S+G+ L Q L + D+ + +
Sbjct: 71 VCSK------EYPIYIVTEYISNGCLLNYL-RSHGK----GLEPSQLLEMCYDVCEGMAF 119
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L H +H DL N L+D D+ VSDFG+ R++ + SS+G K V
Sbjct: 120 LESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-------VSSVGTKFPV 169
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P Y S S DV++ G+++ E+F+
Sbjct: 170 KWSAP---------EVFHYFKYSSKS---DVWAFGILMWEVFS 200
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 118/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGLAR F P T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV--- 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 165 ----TLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 200
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGLAR F P T
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV--- 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 165 ----TLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 200
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 66 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGLAR F P T
Sbjct: 114 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLAR-AFGVPVRTYXHEVV--- 166
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 167 ----TLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 63/237 (26%), Positives = 108/237 (45%), Gaps = 40/237 (16%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNT 733
E F IG+G++G VYK G VA+K + L +G + + E +L+
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLN 791
H N++K++ V + + LV+E++ L++++ S G P L LI+ +
Sbjct: 67 NHPNIVKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--S 114
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ + + H H ++H DLKP N+L++ + ++DFGL AR F + T
Sbjct: 115 YLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRT 166
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG-DVYSLGVMLLEMFTRR 907
+ + T+ Y P E +G + T D++SLG + EM TRR
Sbjct: 167 YTHEV---VTLWYRAP------------EILLGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 71/286 (24%), Positives = 120/286 (41%), Gaps = 47/286 (16%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 95
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 96 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 142
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 143 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 193
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 194 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 241
Query: 913 ---MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L A K + V+ L+L D +R EE
Sbjct: 242 EYLIFQKIIKLEYDFPAAFFPKARDLVEKLLVL---DATKRLGCEE 284
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 37 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 91
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 92 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 143
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 144 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 194
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 195 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 243
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 244 GG---IHE--DYQLPYYDLVPSDPSV 264
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 191 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 239 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 281
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 93
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 94 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 140
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 141 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 191
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 192 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 239
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 240 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 282
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 91 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 188
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 189 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 237 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 279
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 191 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 239 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 281
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 91 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 188
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 189 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 237 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 279
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 191 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 239 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 281
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 74
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 75 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 121
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 122 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 172
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 173 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 220
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 221 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 263
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 89
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 90 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 136
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 137 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 187
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 188 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 235
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 236 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 278
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 67
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 68 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 114
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 115 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 165
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 166 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 214 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 256
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 69
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 70 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 116
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 117 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 167
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 168 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 216 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 258
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 70
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 71 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 117
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 118 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 168
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 169 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 217 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 259
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 64.3 bits (155), Expect = 3e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 68
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 69 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 115
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 116 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 166
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 167 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 215 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 257
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 7 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 66
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ + L++++ S G P L LI+ + +
Sbjct: 67 VKLLDVIHT-----ENKLYLVFEFL-SMDLKDFMDASALTGIP----LPLIK--SYLFQL 114
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 115 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 166
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 167 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 208
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 209 DSEIDQLFRIFRTLGTPDEVV 229
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
+ + +++ IGQG+ G+VY + G VA++ +NL Q+ + + E V+R
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
++ N++ + + D +V EY+ GSL + + E C + Q +
Sbjct: 75 KNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVT------ETC-MDEGQIAAVC 122
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ A+E+LH + ++H D+K N+LL D ++DFG + QS
Sbjct: 123 RECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--------QS 171
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT ++ P + + P + D++SLG+M +EM P
Sbjct: 172 KRSTMVGTPYWMAPEVVTRKAYGPKV------------DIWSLGIMAIEMIEGEPP 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 50 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 104
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 105 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 156
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 157 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 207
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 208 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 256
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 257 GG---IHE--DYQLPYYDLVPSDPSV 277
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 83
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 84 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 138
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH +L N ++ HD + DFG+ R ++ +
Sbjct: 139 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----------ET 184
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 185 DYYRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 226
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
+ + +++ IGQG+ G+VY + G VA++ +NL Q+ + + E V+R
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
++ N++ + + D +V EY+ GSL + + E C + Q +
Sbjct: 75 KNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVT------ETC-MDEGQIAAVC 122
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ A+E+LH + ++H D+K N+LL D ++DFG + QS
Sbjct: 123 RECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--------QS 171
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT ++ P + + P + D++SLG+M +EM P
Sbjct: 172 KRSEMVGTPYWMAPEVVTRKAYGPKV------------DIWSLGIMAIEMIEGEPP 215
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
+ + +++ IGQG+ G+VY + G VA++ +NL Q+ + + E V+R
Sbjct: 15 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
++ N++ + + D +V EY+ GSL + + E C + Q +
Sbjct: 75 KNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVT------ETC-MDEGQIAAVC 122
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ A+E+LH + ++H D+K N+LL D ++DFG + QS
Sbjct: 123 RECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--------QS 171
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT ++ P + + P + D++SLG+M +EM P
Sbjct: 172 KRSXMVGTPYWMAPEVVTRKAYGPKV------------DIWSLGIMAIEMIEGEPP 215
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ + L++++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEFL-SMDLKDFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L+ ++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKTFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 109/229 (47%), Gaps = 40/229 (17%)
Query: 687 IGQGSFGSVYKG-----ILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRHRNL 738
+GQGSFG VY+G I GE T VAVK +N + +L+ F+ E V++ ++
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVN--ESASLRERIEFLNEASVMKGFTCHHV 82
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPEVCDLSLIQRLNIAI 794
++++ V S KG +V E M +G L+ +L ++ P +L + + +A
Sbjct: 83 VRLLGVVS----KGQP-TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAA 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A + YL+ VH +L N ++ HD + DFG+ R ++ +
Sbjct: 138 EIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY-----------ET 183
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
KG G +P + + L+ G+ + +S D++S GV+L E+
Sbjct: 184 DYYRKGGKGLLP----VRWMAPESLKDGVFTTSS---DMWSFGVVLWEI 225
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 6 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 65
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ + L++++ S G P L LI+ + +
Sbjct: 66 VKLLDVIHT-----ENKLYLVFEFL-SMDLKKFMDASALTGIP----LPLIK--SYLFQL 113
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 114 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 165
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 166 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 207
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 208 DSEIDQLFRIFRTLGTPDEVV 228
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
+ + +++ IGQG+ G+VY + G VA++ +NL Q+ + + E V+R
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
++ N++ + + D +V EY+ GSL + + E C + Q +
Sbjct: 76 KNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVT------ETC-MDEGQIAAVC 123
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ A+E+LH + ++H D+K N+LL D ++DFG + QS
Sbjct: 124 RECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE--------QS 172
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT ++ P + + P + D++SLG+M +EM P
Sbjct: 173 KRSXMVGTPYWMAPEVVTRKAYGPKV------------DIWSLGIMAIEMIEGEPP 216
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 40/232 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 113 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG-DVYSLGVMLLEMFTRR 907
T+ Y P E +G + T D++SLG + EM TRR
Sbjct: 165 ---VTLWYRAP------------EILLGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ + L++++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEFL-SMDLKKFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 191 ANXFVGTAQYVSP------------ELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 915 QGGLTLHEFCKMA--LPEKVM----ETVDPSLLLAWSDGRRRAKVEE 955
+ GL + K+ PEK + V+ L+L D +R EE
Sbjct: 239 E-GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL---DATKRLGCEE 281
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 119/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 8 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ + L++++ S G P L LI+ + +
Sbjct: 68 VKLLDVIHT-----ENKLYLVFEHV-DQDLKKFMDASALTGIP----LPLIK--SYLFQL 115
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T +
Sbjct: 116 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYXHEV 167
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 168 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 209
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 210 DSEIDQLFRIFRTLGTPDEVV 230
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 38/231 (16%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+K + L +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L+ ++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEHVHQ-DLKTFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 112 LQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 163
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T+ Y P + L C Y S D++SLG + EM TRR
Sbjct: 164 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR 200
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 92
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 93 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 139
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 140 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 190
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 191 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 915 QGGLTLHEFCKMA--LPEKVM----ETVDPSLLLAWSDGRRRAKVEE 955
+ GL + K+ PEK + V+ L+L D +R EE
Sbjct: 239 E-GLIFAKIIKLEYDFPEKFFPKARDLVEKLLVL---DATKRLGCEE 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 63.9 bits (154), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 112/269 (41%), Gaps = 61/269 (22%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL------NLMQKGALKSFVAECEVLRNT 733
E + +IG G FG VY+ G VAVK ++ Q +++ E ++
Sbjct: 8 ELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQ--TIENVRQEAKLFAML 63
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I + VC K + LV E+ + G L L P++ +N A
Sbjct: 64 KHPNIIALRGVC----LKEPNL-CLVMEFARGGPLNRVLSGKRIPPDIL-------VNWA 111
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--------VAHVSDFGLARFLFARPF 845
+ +A + YLH PI+H DLK SN+L+ + + ++DFGLAR
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH---- 167
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+++ + G ++ P E S S DV+S GV+L E+ T
Sbjct: 168 ------RTTKMSAAGAYAWMAP------------EVIRASMFSKGSDVWSYGVLLWELLT 209
Query: 906 RRRPTNCMFQG--GLTLH---EFCKMALP 929
P F+G GL + K+ALP
Sbjct: 210 GEVP----FRGIDGLAVAYGVAMNKLALP 234
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAV-KI-LNLMQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+ KI L+ +G + + E +L+ H N+
Sbjct: 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 65 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 112
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 113 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 164
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 165 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 206
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 207 DSEIDQLFRIFRTLGTPDEVV 227
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 120/261 (45%), Gaps = 46/261 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAV-KI-LNLMQKGALKSFVAECEVLRNTRHRNL 738
F IG+G++G VYK G VA+ KI L+ +G + + E +L+ H N+
Sbjct: 4 FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNI 63
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS--NGQPEVCDLSLIQRLNIAIDM 796
+K++ V + + LV+E++ L++++ S G P L LI+ + +
Sbjct: 64 VKLLDVIHT-----ENKLYLVFEFLHQ-DLKKFMDASALTGIP----LPLIK--SYLFQL 111
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H H ++H DLKP N+L++ + ++DFGL AR F + T + +
Sbjct: 112 LQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGL-----ARAFGVPVRTYTHEV 163
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
T+ Y P + L C Y S D++SLG + EM TRR +F G
Sbjct: 164 ---VTLWYRAPEIL-----LGCKYY------STAVDIWSLGCIFAEMVTRR----ALFPG 205
Query: 917 GLTLHE----FCKMALPEKVM 933
+ + F + P++V+
Sbjct: 206 DSEIDQLFRIFRTLGTPDEVV 226
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
+ F ++G+GSFG V + E G AVK+L ++Q ++ + E +L R+
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ D V E++ G L + +S E + A +
Sbjct: 83 HPFLTQLFCC----FQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEA------RARFYAAE 132
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+ +LH I++ DLK NVLLDH+ ++DFG+ + + ++
Sbjct: 133 IISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCK--------EGICNGVTT 181
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +ML P +++ +++GV+L EM P
Sbjct: 182 ATFCGTPDYIAPEILQEMLYGPAVDW------------WAMGVLLYEMLCGHAP 223
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 63.5 bits (153), Expect = 6e-10, Method: Composition-based stats.
Identities = 72/287 (25%), Positives = 124/287 (43%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF +V A+KIL +++++ + E +V+ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 97
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 98 FFVKLY-------FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 144
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 145 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 195
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 196 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 243
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 244 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 286
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 111/246 (45%), Gaps = 40/246 (16%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SF 723
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F
Sbjct: 40 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEF 97
Query: 724 VAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQP 779
+ E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 98 LNEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 780 EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R
Sbjct: 153 VLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRD 209
Query: 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
++ + KG G +P + ++ L+ G+ + S DV+S GV+
Sbjct: 210 IYETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVV 251
Query: 900 LLEMFT 905
L E+ T
Sbjct: 252 LWEIAT 257
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 63.2 bits (152), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 107/234 (45%), Gaps = 44/234 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
+G+G +G V++G+ +G VAVKI + + +S+ E E+ RH N++ I
Sbjct: 16 VGKGRYGEVWRGLW--HGESVAVKIFSSRDE---QSWFRETEIYNTVLLRHDNILGFIA- 69
Query: 745 CSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
S + + + + L+ Y ++GSL ++L + +P + L +A+ A + +L
Sbjct: 70 -SDMTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLA-------LRLAVSAACGLAHL 121
Query: 804 H-----HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS---S 855
H +P I H D K NVL+ ++ ++D GLA M +Q S
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA----------VMHSQGSDYLD 171
Query: 856 IGIKGTVG---YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
IG VG Y+ P + + + C E+ D+++ G++L E+ R
Sbjct: 172 IGNNPRVGTKRYMAPEVLDEQIRTDCF------ESYKWTDIWAFGLVLWEIARR 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 105/239 (43%), Gaps = 36/239 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNL 738
+F +G+G FG V++ + A+K + L + A + + E + L H +
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGI 65
Query: 739 IKIITVC----SSIDFKGADFKALVYEYMQ---NGSLEEWLHQSNGQPEVCDLSLIQR-- 789
++ ++ + + K +Y MQ +L++W+ NG+ C + +R
Sbjct: 66 VRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM---NGR---CTIEERERSV 119
Query: 790 -LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD-- 846
L+I + +A A+E+LH ++H DLKPSN+ D V V DFGL + +
Sbjct: 120 CLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT 176
Query: 847 --TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
T M + G GT Y+ P I G+ S D++SLG++L E+
Sbjct: 177 VLTPMPAYARHTGQVGTKLYMSPEQIH------------GNSYSHKVDIFSLGLILFEL 223
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.8 bits (151), Expect = 9e-10, Method: Composition-based stats.
Identities = 71/287 (24%), Positives = 123/287 (42%), Gaps = 49/287 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F ++G+GSF + A+KIL +++++ + E +V+ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHP 90
Query: 737 NLIKIITVCSSIDFKGADFKALVY--EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+K+ F D + L + Y +NG L +++ + E C R A
Sbjct: 91 FFVKLY-------FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETC-----TRFYTA- 137
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++ SA+EYLH I+H DLKP N+LL+ DM ++DFG A+ L + Q+
Sbjct: 138 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL------SPESKQAR 188
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-- 912
+ GT YV P E A + D+++LG ++ ++ P
Sbjct: 189 ANXFVGTAQYVSP------------ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 236
Query: 913 ---MFQGGLTL-HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE 955
+FQ + L ++F + P K + V+ L+L D +R EE
Sbjct: 237 EYLIFQKIIKLEYDFPEKFFP-KARDLVEKLLVL---DATKRLGCEE 279
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 159
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 55/265 (20%)
Query: 670 SYSELSEATNEFSSSNMI-----GQGSFGSVYKG----ILGENG-TFVAVKILNL-MQKG 718
++ L + EF N++ G+G FG V K + G G T VAVK+L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 719 ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-- 776
L+ ++E VL+ H ++IK+ CS G L+ EY + GSL +L +S
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKV 123
Query: 777 ----------------GQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSN 820
P+ L++ ++ A ++ ++YL + +VH DL N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARN 180
Query: 821 VLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLE 880
+L+ +SDFGL+R ++ E S +K + G +P +A +E
Sbjct: 181 ILVAEGRKMKISDFGLSRDVY--------EEDSX---VKRSQGRIPVKWMA-------IE 222
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFT 905
+ DV+S GV+L E+ T
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 65/232 (28%), Positives = 111/232 (47%), Gaps = 43/232 (18%)
Query: 688 GQGSFGSVYKG-ILGENGTFVAVKILNLMQKGALKSFVAECEV--LRNTRHRNLIKIITV 744
+G FG V+K +L E +VAVKI + K +S+ E EV L +H N+++ I
Sbjct: 33 ARGRFGCVWKAQLLNE---YVAVKIFPIQDK---QSWQNEYEVYSLPGMKHENILQFIGA 86
Query: 745 ---CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
+S+D L+ + + GSL ++L + +S + +IA MA +
Sbjct: 87 EKRGTSVDVD----LWLITAFHEKGSLSDFLKANV-------VSWNELCHIAETMARGLA 135
Query: 802 YLHHHC-------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
YLH +P I H D+K NVLL +++ A ++DFGL A F+ ++
Sbjct: 136 YLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGL-----ALKFEAG-KSAGD 189
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
+ G GT Y+ P + +N +A + D+Y++G++L E+ +R
Sbjct: 190 THGQVGTRRYMAPEVLEGAINFQ-------RDAFLRIDMYAMGLVLWELASR 234
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 67
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 68 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 122
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 123 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 179
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 180 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 221
Query: 901 LEMFT 905
E+ T
Sbjct: 222 WEIAT 226
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 63
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 175
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 176 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 217
Query: 901 LEMFT 905
E+ T
Sbjct: 218 WEIAT 222
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 69
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 182 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 223
Query: 901 LEMFT 905
E+ T
Sbjct: 224 WEIAT 228
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 69
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 70 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 124
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 125 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 181
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 182 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 223
Query: 901 LEMFT 905
E+ T
Sbjct: 224 WEIAT 228
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 76
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 131
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 189 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 230
Query: 901 LEMFT 905
E+ T
Sbjct: 231 WEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 111/245 (45%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 70
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 182
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 183 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 224
Query: 901 LEMFT 905
E+ T
Sbjct: 225 WEIAT 229
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 68 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 116
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 117 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 162
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 163 ATMKTFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 159
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 159
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 159
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 160 ATMKXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 153/355 (43%), Gaps = 70/355 (19%)
Query: 652 SKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK- 710
+KQ S+ P + +++ IGQG+FG V+K + G VA+K
Sbjct: 3 AKQYDSVECP------------FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK 50
Query: 711 -ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY------EYM 763
++ ++G + + E ++L+ +H N++ +I +C + KA +Y E+
Sbjct: 51 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHD 110
Query: 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823
G L L + LS I+R + + + + Y+H + I+H D+K +NVL+
Sbjct: 111 LAGLLSNVLVKFT-------LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANVLI 158
Query: 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GTVGYVPPGNIAKMLNLPCLEYG 882
D V ++DFGL AR F + +Q + + T+ Y PP L L +YG
Sbjct: 159 TRDGVLKLADFGL-----ARAFSLAKNSQPNRYXNRVVTLWYRPPE-----LLLGERDYG 208
Query: 883 MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH------EFCKMALPEKVMETV 936
D++ G ++ EM+TR + + QG H + C PE V V
Sbjct: 209 ------PPIDLWGAGCIMAEMWTR----SPIMQGNTEQHQLALISQLCGSITPE-VWPNV 257
Query: 937 DPSLL---LAWSDGRRRAKVEECLVTVIRIGVACSM------ESPIERMEMRDVL 982
D L L G++R KV++ L +R A + P +R++ D L
Sbjct: 258 DNYELYEKLELVKGQKR-KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHR 736
++ +G+G++G VYK G VA+K + L +G + + E +L+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
N++ +I V S LV+E+M+ L++ L ++ + +Q I I +
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIYL 125
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H Q I+H DLKP N+L++ D ++DFGL AR F + + + +
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL-----ARAFGIPVRSYTHEV 180
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFT 905
T+ Y P + MGS+ S + D++S+G + EM T
Sbjct: 181 ---VTLWYRAPDVL------------MGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHR 736
++ +G+G++G VYK G VA+K + L +G + + E +L+ H
Sbjct: 21 EKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHP 79
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
N++ +I V S LV+E+M+ L++ L ++ + +Q I I +
Sbjct: 80 NIVSLIDVIHS-----ERCLTLVFEFMEK-DLKKVLDENK--------TGLQDSQIKIYL 125
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ + H Q I+H DLKP N+L++ D ++DFGL AR F + + + +
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGL-----ARAFGIPVRSYTHEV 180
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFT 905
T+ Y P + MGS+ S + D++S+G + EM T
Sbjct: 181 ---VTLWYRAPDVL------------MGSKKYSTSVDIWSIGCIFAEMIT 215
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITV 744
IG GS+G K +G + K L+ M + + V+E +LR +H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
ID +V EY + G L + + + + D + L + + A++ H
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLALKECH 128
Query: 805 HHCQ--PPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
++H DLKP+NV LD + DFGLAR L DTS + GT
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSF-----AKAFVGTP 180
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
Y+ P + +M Y S D++SLG +L E+
Sbjct: 181 YYMSPEQMNRM------SYNEKS------DIWSLGCLLYEL 209
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
NEF ++G+G+FG V G + A+KIL ++ K + + E VL+N+RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + D + +
Sbjct: 68 PFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF----YGAE 116
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA++YLH + +V+ DLK N++LD D ++DFGL + ++ ++
Sbjct: 117 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATM 166
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 167 KXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 208
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 30/195 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKIL------NLMQKGALKSFVAECEVLRNTRHRNLIK 740
IG+GS+G V+K + G VA+K +++K AL+ E +L+ +H NL+
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALR----EIRMLKQLKHPNLVN 66
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
++ V F+ LV+EY + L E G PE L++ +I A+
Sbjct: 67 LLEV-----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPE----HLVK--SITWQTLQAV 115
Query: 801 EYLH-HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP--FDTSMETQ--SSS 855
+ H H+C +H D+KP N+L+ V + DFG AR L +D + T+ S
Sbjct: 116 NFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSP 171
Query: 856 IGIKGTVGYVPPGNI 870
+ G Y PP ++
Sbjct: 172 ELLVGDTQYGPPVDV 186
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 103/236 (43%), Gaps = 35/236 (14%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
+ + +++ IGQG+ G+VY + G VA++ +NL Q+ + + E V+R
Sbjct: 16 VGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN 75
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
++ N++ + + D +V EY+ GSL + + E C + Q +
Sbjct: 76 KNPNIVNYLD-----SYLVGDELWVVMEYLAGGSLTDVVT------ETC-MDEGQIAAVC 123
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ A+E+LH + ++H ++K N+LL D ++DFG + QS
Sbjct: 124 RECLQALEFLHSN---QVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPE--------QS 172
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT ++ P + + P + D++SLG+M +EM P
Sbjct: 173 KRSTMVGTPYWMAPEVVTRKAYGPKV------------DIWSLGIMAIEMIEGEPP 216
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
NEF ++G+G+FG V G + A+KIL ++ K + + E VL+N+RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + D + +
Sbjct: 211 PFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF----YGAE 259
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA++YLH + +V+ DLK N++LD D ++DFGL + ++ ++
Sbjct: 260 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATM 309
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 310 KTFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 351
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 61
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 62 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 116
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R
Sbjct: 117 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 171
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 172 ---------DIXETDXXRKGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 215
Query: 901 LEMFT 905
E+ T
Sbjct: 216 WEIAT 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
NEF ++G+G+FG V G + A+KIL ++ K + + E VL+N+RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + D + +
Sbjct: 208 PFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF----YGAE 256
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA++YLH + +V+ DLK N++LD D ++DFGL + ++ ++
Sbjct: 257 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATM 306
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 307 KTFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 348
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 70
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 71 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 125
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R
Sbjct: 126 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR-- 180
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 181 ---------DIXETDXXRKGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 224
Query: 901 LEMFT 905
E+ T
Sbjct: 225 WEIAT 229
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 70 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 118
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 119 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 164
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 165 ATMKXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
NEF ++G+G+FG V G + A+KIL ++ K + + E VL+N+RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + D + +
Sbjct: 69 PFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF----YGAE 117
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA++YLH + +V+ DLK N++LD D ++DFGL + ++ ++
Sbjct: 118 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATM 167
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 168 KXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 209
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 74/357 (20%)
Query: 652 SKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK- 710
+KQ S+ P + +++ IGQG+FG V+K + G VA+K
Sbjct: 3 AKQYDSVECP------------FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK 50
Query: 711 -ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSI-----DFKGADFKALVYEYMQ 764
++ ++G + + E ++L+ +H N++ +I +C + KG+ + LV+++ +
Sbjct: 51 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCE 108
Query: 765 N---GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821
+ G L L + LS I+R + + + + Y+H + I+H D+K +NV
Sbjct: 109 HDLAGLLSNVLVKFT-------LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANV 156
Query: 822 LLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GTVGYVPPGNIAKMLNLPCLE 880
L+ D V ++DFGL AR F + +Q + + T+ Y PP L L +
Sbjct: 157 LITRDGVLKLADFGL-----ARAFSLAKNSQPNRYXNRVVTLWYRPPE-----LLLGERD 206
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH------EFCKMALPEKVME 934
YG D++ G ++ EM+TR + + QG H + C PE V
Sbjct: 207 YG------PPIDLWGAGCIMAEMWTR----SPIMQGNTEQHQLALISQLCGSITPE-VWP 255
Query: 935 TVDPSLL---LAWSDGRRRAKVEECLVTVIRIGVACSM------ESPIERMEMRDVL 982
VD L L G++R KV++ L +R A + P +R++ D L
Sbjct: 256 NVDNYELYEKLELVKGQKR-KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
NEF ++G+G+FG V G + A+KIL ++ K + + E VL+N+RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + D + +
Sbjct: 70 PFLTAL-----KYSFQTHDRLCFVMEYANGGEL--FFHLSRERVFSEDRARF----YGAE 118
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA++YLH + +V+ DLK N++LD D ++DFGL + ++ ++
Sbjct: 119 IVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------EGIKDGATM 168
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 169 KXFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 52/159 (32%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L +S + E ++LR H ++IK
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
C GA LV EY+ GSL ++L + + + L Q L A + +
Sbjct: 99 KGCCED---AGAASLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 148
Query: 802 YLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
YLH H+ +H DL NVLLD+D + + DFGLA+
Sbjct: 149 YLHAQHY-----IHRDLAARNVLLDNDRLVKIGDFGLAK 182
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 107/242 (44%), Gaps = 32/242 (13%)
Query: 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAEC-E 728
++ E ++ ++IG+G V + + G AVKI+ + + + E E
Sbjct: 85 DWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVRE 144
Query: 729 VLRNTRH--RNLI---KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD 783
R H R + IIT+ S ++ + F LV++ M+ G L ++L E
Sbjct: 145 ATRRETHILRQVAGHPHIITLIDS--YESSSFMFLVFDLMRKGELFDYL------TEKVA 196
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS + +I + A+ +LH + IVH DLKP N+LLD +M +SDFG
Sbjct: 197 LSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFG-------- 245
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
F +E + GT GY+ P I K ++ G G E D+++ GV+L +
Sbjct: 246 -FSCHLEPGEKLRELCGTPGYLAP-EILK-CSMDETHPGYGKEV----DLWACGVILFTL 298
Query: 904 FT 905
Sbjct: 299 LA 300
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L L+S + E E+LR H +++K
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
C +G LV EY+ GSL ++L P C + L Q L A + +
Sbjct: 76 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------PRHC-VGLAQLLLFAQQICEGMA 125
Query: 802 YLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
YLH H+ +H L NVLLD+D + + DFGLA+
Sbjct: 126 YLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAK 159
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L L+S + E E+LR H +++K
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
C +G LV EY+ GSL ++L P C + L Q L A + +
Sbjct: 77 KGCCED---QGEKSVQLVMEYVPLGSLRDYL------PRHC-VGLAQLLLFAQQICEGMA 126
Query: 802 YLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
YLH H+ +H L NVLLD+D + + DFGLA+
Sbjct: 127 YLHAQHY-----IHRALAARNVLLDNDRLVKIGDFGLAK 160
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 74/357 (20%)
Query: 652 SKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK- 710
+KQ S+ P + +++ IGQG+FG V+K + G VA+K
Sbjct: 3 AKQYDSVECP------------FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK 50
Query: 711 -ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSI-----DFKGADFKALVYEYMQ 764
++ ++G + + E ++L+ +H N++ +I +C + KG+ + LV+++ +
Sbjct: 51 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCE 108
Query: 765 N---GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821
+ G L L + LS I+R + + + + Y+H + I+H D+K +NV
Sbjct: 109 HDLAGLLSNVLVKFT-------LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANV 156
Query: 822 LLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GTVGYVPPGNIAKMLNLPCLE 880
L+ D V ++DFGL AR F + +Q + + T+ Y PP L L +
Sbjct: 157 LITRDGVLKLADFGL-----ARAFSLAKNSQPNRYXNRVVTLWYRPPE-----LLLGERD 206
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH------EFCKMALPEKVME 934
YG D++ G ++ EM+TR + + QG H + C PE V
Sbjct: 207 YG------PPIDLWGAGCIMAEMWTR----SPIMQGNTEQHQLALISQLCGSITPE-VWP 255
Query: 935 TVDPSLL---LAWSDGRRRAKVEECLVTVIRIGVACSM------ESPIERMEMRDVL 982
VD L L G++R KV++ L +R A + P +R++ D L
Sbjct: 256 NVDNYELYEKLELVKGQKR-KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 311
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 93/221 (42%), Gaps = 29/221 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITV 744
IG GS+G K +G + K L+ M + + V+E +LR +H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
ID +V EY + G L + + + + D + L + + A++ H
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLALKECH 128
Query: 805 HHCQ--PPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
++H DLKP+NV LD + DFGLAR L DTS + GT
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL---NHDTSF-----AKTFVGTP 180
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
Y+ P + +M + D++SLG +L E+
Sbjct: 181 YYMSPEQMNRM------------SYNEKSDIWSLGCLLYEL 209
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 119/298 (39%), Gaps = 62/298 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVK--ILNLMQKGALKSFVAECE---VLRNT 733
E ++G G FG+V+KG+ G + + I + K +SF A + + +
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLN 791
H ++++++ +C + LV +Y+ GSL + + Q G P++ LN
Sbjct: 91 DHAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-------LN 137
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
+ +A + YL H +VH +L NVLL V+DFG+A L P D +
Sbjct: 138 WGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLL--PPDDKQLLY 192
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
+ I K + L + +G + S DV+S GV + E+ T
Sbjct: 193 SEAKTPI-------------KWMALESIHFGKYTHQS---DVWSYGVTVWELMT----FG 232
Query: 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
GL L E P LL G R A+ + C + V + V C M
Sbjct: 233 AEPYAGLRLAEV--------------PDLL---EKGERLAQPQICTIDVYMVMVKCWM 273
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 83/185 (44%), Gaps = 39/185 (21%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN------------------------- 713
N+++ + IG+GS+G V + T+ A+K+L+
Sbjct: 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGG 72
Query: 714 -LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL 772
+ +G ++ E +L+ H N++K++ V +D D +V+E + G + E
Sbjct: 73 CIQPRGPIEQVYQEIAILKKLDHPNVVKLVEV---LDDPNEDHLYMVFELVNQGPVMEV- 128
Query: 773 HQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832
P + LS Q D+ IEYLH+ I+H D+KPSN+L+ D ++
Sbjct: 129 ------PTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIA 179
Query: 833 DFGLA 837
DFG++
Sbjct: 180 DFGVS 184
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 158/357 (44%), Gaps = 74/357 (20%)
Query: 652 SKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK- 710
+KQ S+ P + +++ IGQG+FG V+K + G VA+K
Sbjct: 2 AKQYDSVECP------------FCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKK 49
Query: 711 -ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSI-----DFKGADFKALVYEYMQ 764
++ ++G + + E ++L+ +H N++ +I +C + KG+ + LV+++ +
Sbjct: 50 VLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIY--LVFDFCE 107
Query: 765 N---GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821
+ G L L + LS I+R + + + + Y+H + I+H D+K +NV
Sbjct: 108 HDLAGLLSNVLVKFT-------LSEIKR--VMQMLLNGLYYIHRN---KILHRDMKAANV 155
Query: 822 LLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GTVGYVPPGNIAKMLNLPCLE 880
L+ D V ++DFGL AR F + +Q + + T+ Y PP L L +
Sbjct: 156 LITRDGVLKLADFGL-----ARAFSLAKNSQPNRYXNRVVTLWYRPPE-----LLLGERD 205
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH------EFCKMALPEKVME 934
YG D++ G ++ EM+TR + + QG H + C PE V
Sbjct: 206 YG------PPIDLWGAGCIMAEMWTR----SPIMQGNTEQHQLALISQLCGSITPE-VWP 254
Query: 935 TVDPSLL---LAWSDGRRRAKVEECLVTVIRIGVACSM------ESPIERMEMRDVL 982
VD L L G++R KV++ L +R A + P +R++ D L
Sbjct: 255 NVDNYELYEKLELVKGQKR-KVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 93/226 (41%), Gaps = 39/226 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITV 744
IG GS+G K +G + K L+ M + + V+E +LR +H N+++
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
ID +V EY + G L + + + + D + L + + A++ H
Sbjct: 74 I--IDRTNTTL-YIVMEYCEGGDLASVITKGTKERQYLDEEFV--LRVMTQLTLALKECH 128
Query: 805 HHCQ--PPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL-----FARPFDTSMETQSSSIG 857
++H DLKP+NV LD + DFGLAR L FA+ F
Sbjct: 129 RRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEF------------ 176
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT Y+ P + +M + D++SLG +L E+
Sbjct: 177 -VGTPYYMSPEQMNRM------------SYNEKSDIWSLGCLLYEL 209
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 63/317 (19%)
Query: 687 IGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIK 740
+G+ FG VYKG L GE VA+K L +G L+ F E + +H N++
Sbjct: 34 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 93
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID----- 795
++ V + ++++ Y +G L E+L + +V + + A++
Sbjct: 94 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 148
Query: 796 -----MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A+ +EYL H +VH DL NVL+ + +SD GL R ++A +
Sbjct: 149 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY----- 200
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
Y GN + E M + S+ D++S GV+L E+F+
Sbjct: 201 -------------YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----- 242
Query: 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970
L +C + + V+E + +L D +C V + + C E
Sbjct: 243 -------YGLQPYCGYS-NQDVVEMIRNRQVLPCPD--------DCPAWVYALMIECWNE 286
Query: 971 SPIERMEMRDVLAKLCA 987
P R +D+ ++L A
Sbjct: 287 FPSRRPRFKDIHSRLRA 303
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 74/317 (23%), Positives = 129/317 (40%), Gaps = 63/317 (19%)
Query: 687 IGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIK 740
+G+ FG VYKG L GE VA+K L +G L+ F E + +H N++
Sbjct: 17 LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVC 76
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID----- 795
++ V + ++++ Y +G L E+L + +V + + A++
Sbjct: 77 LLGVVTK-----DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFV 131
Query: 796 -----MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A+ +EYL H +VH DL NVL+ + +SD GL R ++A +
Sbjct: 132 HLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY----- 183
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
Y GN + E M + S+ D++S GV+L E+F+
Sbjct: 184 -------------YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS----- 225
Query: 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970
L +C + + V+E + +L D +C V + + C E
Sbjct: 226 -------YGLQPYCGYS-NQDVVEMIRNRQVLPCPD--------DCPAWVYALMIECWNE 269
Query: 971 SPIERMEMRDVLAKLCA 987
P R +D+ ++L A
Sbjct: 270 FPSRRPRFKDIHSRLRA 286
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 76
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN----GQPE 780
E V++ ++++++ V S ++ E M G L+ +L P
Sbjct: 77 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 131
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 132 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 188
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 189 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 230
Query: 901 LEMFT 905
E+ T
Sbjct: 231 WEIAT 235
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 66
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN----GQPE 780
E V++ ++++++ V S ++ E M G L+ +L P
Sbjct: 67 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPAMANNPV 121
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N ++ D + DFG+ R +
Sbjct: 122 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDI 178
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 179 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 220
Query: 901 LEMFT 905
E+ T
Sbjct: 221 WEIAT 225
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAVKI++ Q +L+ E +++ H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDT 847
Q IVH DLK N+LLD DM ++DFG + F F DT
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 110/245 (44%), Gaps = 40/245 (16%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQKGALK---SFV 724
E A + + S +GQGSFG VY+G+ E T VA+K +N + +++ F+
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EAASMRERIEFL 63
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH----QSNGQPE 780
E V++ ++++++ V S ++ E M G L+ +L + P
Sbjct: 64 NEASVMKEFNCHHVVRLLGVVSQ-----GQPTLVIMELMTRGDLKSYLRSLRPEMENNPV 118
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ SL + + +A ++A + YL+ + VH DL N + D + DFG+ R +
Sbjct: 119 LAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDI 175
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + KG G +P + ++ L+ G+ + S DV+S GV+L
Sbjct: 176 YETDYYR-----------KGGKGLLP----VRWMSPESLKDGVFTTYS---DVWSFGVVL 217
Query: 901 LEMFT 905
E+ T
Sbjct: 218 WEIAT 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAVKI++ Q +L+ E +++ H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDT 847
Q IVH DLK N+LLD DM ++DFG + F F DT
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAVKI++ Q +L+ E +++ H N++K+ V
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 75 IET-----EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQI------VSAVQYCH 123
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDT 847
Q IVH DLK N+LLD DM ++DFG + F F DT
Sbjct: 124 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 164
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q A K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 176
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 177 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAEL 216
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 104/225 (46%), Gaps = 32/225 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q A K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 176
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 177 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAEL 216
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+ +G G FG V + I + G VA+K + + + E ++++ H N++
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 76
Query: 740 KIITVCSSID-FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
V + D L EY + G L ++L+Q C L + D++S
Sbjct: 77 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISS 133
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
A+ YLH + I+H DLKP N++L ++ + D G A+ L T
Sbjct: 134 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE------- 183
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT+ Y+ P + + + +VT D +S G + E T RP
Sbjct: 184 --FVGTLQYLAPELLEQ------------KKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 95/234 (40%), Gaps = 32/234 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+ +G G FG V + I + G VA+K + + + E ++++ H N++
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVV 75
Query: 740 KIITVCSSID-FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
V + D L EY + G L ++L+Q C L + D++S
Sbjct: 76 SAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFEN---CCGLKEGPIRTLLSDISS 132
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
A+ YLH + I+H DLKP N++L ++ + D G A+ L T
Sbjct: 133 ALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTE------- 182
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT+ Y+ P + + + +VT D +S G + E T RP
Sbjct: 183 --FVGTLQYLAPELLEQ------------KKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 60.5 bits (145), Expect = 5e-09, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 100/237 (42%), Gaps = 43/237 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
N+F ++G+G+FG V G + A+KIL ++ K + V E VL+NTRH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L + F+ D V EY G L + H S + + + +
Sbjct: 65 PFLTAL-----KYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFTEERARF----YGAE 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ SA+EYLH +V+ D+K N++LD D ++DFGL + E S
Sbjct: 114 IVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-----------EGISDG 159
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+K GT Y+ P + +YG D + LGV++ EM R P
Sbjct: 160 ATMKTFCGTPEYLAPEVLEDN------DYGRAV------DWWGLGVVMYEMMCGRLP 204
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 687 IGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGALKSFVAECEVLRNT---RHRNLIKII 742
+G+G +G V++G GEN VAVKI + + KS+ E E L NT RH N++ I
Sbjct: 45 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETE-LYNTVMLRHENILGFI 97
Query: 743 TVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
S + + + + L+ Y + GSL ++L ++ L + L I + +AS +
Sbjct: 98 A--SDMTSRHSSTQLWLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLA 148
Query: 802 YLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+LH +P I H DLK N+L+ + ++D GLA S T +
Sbjct: 149 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-------HSQSTNQLDV 201
Query: 857 GIKGTVG---YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G VG Y+ P + + + + C + S V D+++ G++L E+ R
Sbjct: 202 GNNPRVGTKRYMAPEVLDETIQVDCFD----SYKRV--DIWAFGLVLWEVARR 248
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 106/237 (44%), Gaps = 41/237 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGT--FVAVKILN---LMQKGALKSFVAECEVLRNT 733
+ F IG+GSFG V I+ +N T A+K +N +++ +++ E ++++
Sbjct: 15 DHFEILRAIGKGSFGKV--CIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGL 72
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS-NGQPEVCDLSLIQRLNI 792
H L+ + F+ + +V + + G L L Q+ + + E L + +
Sbjct: 73 EHPFLVNLW-----YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICE---- 123
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ A++YL + I+H D+KP N+LLD H++DF +A L ETQ
Sbjct: 124 ---LVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML-------PRETQ 170
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+++ GT Y+ P + G+ S D +SLGV E+ RRP
Sbjct: 171 ITTMA--GTKPYMAPEMFSS---------RKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 60.1 bits (144), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHR 736
++ IG+G++G+V+K E VA+K + L +G S + E +L+ +H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 737 NLIKIITVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIA 793
N++++ V S D K LV+E+ + L+++ NG PE+ L Q L
Sbjct: 62 NIVRLHDVLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL--- 111
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ + H ++H DLKP N+L++ + ++DFGL AR F + S
Sbjct: 112 ----KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGL-----ARAFGIPVRCYS 159
Query: 854 SSIGIKGTVGYVPPGNI--AKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ + T+ Y PP + AK+ S + D++S G + E+ RP
Sbjct: 160 AEV---VTLWYRPPDVLFGAKLY-------------STSIDMWSAGCIFAELANAARP 201
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 687 IGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGALKSFVAECEVLRNT---RHRNLIKII 742
+G+G +G V++G GEN VAVKI + + KS+ E E L NT RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETE-LYNTVMLRHENILGFI 68
Query: 743 TVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
S + + + + L+ Y + GSL ++L ++ L + L I + +AS +
Sbjct: 69 A--SDMTSRHSSTQLWLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLA 119
Query: 802 YLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+LH +P I H DLK N+L+ + ++D GLA S T +
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-------HSQSTNQLDV 172
Query: 857 GIKGTVG---YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G VG Y+ P + + + + C + S V D+++ G++L E+ R
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFD----SYKRV--DIWAFGLVLWEVARR 219
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 42/233 (18%)
Query: 687 IGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGALKSFVAECEVLRNT---RHRNLIKII 742
+G+G +G V++G GEN VAVKI + + KS+ E E L NT RH N++ I
Sbjct: 16 VGKGRYGEVWRGSWQGEN---VAVKIFSSRDE---KSWFRETE-LYNTVMLRHENILGFI 68
Query: 743 TVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
S + + + + L+ Y + GSL ++L ++ L + L I + +AS +
Sbjct: 69 A--SDMTSRHSSTQLWLITHYHEMGSLYDYL-------QLTTLDTVSCLRIVLSIASGLA 119
Query: 802 YLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+LH +P I H DLK N+L+ + ++D GLA S T +
Sbjct: 120 HLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM-------HSQSTNQLDV 172
Query: 857 GIKGTVG---YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906
G VG Y+ P + + + + C + S V D+++ G++L E+ R
Sbjct: 173 GNNPRVGTKRYMAPEVLDETIQVDCFD----SYKRV--DIWAFGLVLWEVARR 219
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAV+I++ Q +L+ E +++ H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDT 847
Q IVH DLK N+LLD DM ++DFG + F F DT
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT 171
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 11 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 68
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLE--EWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+++ WL + + +R + +M
Sbjct: 69 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 117
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 118 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 170
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
GTV Y+PP I M + E G S+ S DV+SLG +L M + P +
Sbjct: 171 ---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 225
Query: 916 GGLTL-------HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLV 958
L HE +PEK ++ V L D ++R + E L
Sbjct: 226 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK--RDPKQRISIPELLA 273
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 80/162 (49%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q A K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQGKAFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 12 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 66
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 67 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 118
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 119 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 169
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 170 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 218
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 219 GG---IHE--DYQLPYYDLVPSDPSV 239
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 11 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 65
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 66 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 117
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 118 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 168
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 169 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 217
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 218 GG---IHE--DYQLPYYDLVPSDPSV 238
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 17 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 71
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 72 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 123
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 124 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 174
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 175 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 223
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 224 GG---IHE--DYQLPYYDLVPSDPSV 244
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 59.7 bits (143), Expect = 9e-09, Method: Composition-based stats.
Identities = 66/266 (24%), Positives = 119/266 (44%), Gaps = 50/266 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
IG+G FG V++G G VAVKI + ++ +S+ E E+ + RH N++ I
Sbjct: 14 IGKGRFGEVWRGKW--RGEEVAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAA 68
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + LV +Y ++GSL ++L++ +++ + +A+ AS + +LH
Sbjct: 69 DNKDNGTWTQL-WLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLH 120
Query: 805 HHC-----QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+P I H DLK N+L+ + ++D GLA ++ + +I I
Sbjct: 121 MEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIA 171
Query: 860 -----GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
GT Y+ P + +N+ E+ D+Y++G++ E+ R C
Sbjct: 172 PNHRVGTKRYMAPEVLDDSINMKHF------ESFKRADIYAMGLVFWEIARR-----CSI 220
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSL 940
G +HE LP + DPS+
Sbjct: 221 GG---IHE--DYQLPYYDLVPSDPSV 241
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 115
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLE--EWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+++ WL + + +R + +M
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 164
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 217
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
GTV Y+PP I M + E G S+ S DV+SLG +L M + P +
Sbjct: 218 ---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 916 GGLTL-------HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLV 958
L HE +PEK ++ V L D ++R + E L
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK--RDPKQRISIPELLA 320
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 176
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 177 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAEL 216
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 90
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 91 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 147
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 148 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 189
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 190 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAEL 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 41/182 (22%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL-----MQKGALKSFVAEC 727
++ + + +G+G F +VYK VA+K + L + G ++ + E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
++L+ H N+I ++ F +LV+++M+ DL +I
Sbjct: 64 KLLQELSHPNIIGLLDA-----FGHKSNISLVFDFMET-----------------DLEVI 101
Query: 788 QRLNIAIDMASAI-----------EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ N + S I EYLH H I+H DLKP+N+LLD + V ++DFGL
Sbjct: 102 IKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGL 158
Query: 837 AR 838
A+
Sbjct: 159 AK 160
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 129/290 (44%), Gaps = 39/290 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 115
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLE--EWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+++ WL + + +R + +M
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 164
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 217
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
GTV Y+PP I M + E G S+ S DV+SLG +L M + P +
Sbjct: 218 ---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 916 GGLTL-------HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLV 958
L HE +PEK ++ V L D ++R + E L
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK--RDPKQRISIPELLA 320
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKGILGE---NGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KV 180
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 181 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 229 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 268
Query: 978 MRDVL 982
+RD L
Sbjct: 269 LRDFL 273
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 82
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 139
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 140 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 181
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 182 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELL 222
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKI-LNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G++G VYK TF KI L +G + + E +L+ +H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD--LSLIQRLNIAIDMASAIEYL 803
+ LV+E++ + L++ L +VC+ L + + + + + I Y
Sbjct: 70 HT-----KKRLVLVFEHL-DQDLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H ++H DLKP N+L++ + ++DFGL AR F + + I T+
Sbjct: 117 HDRR---VLHRDLKPQNLLINREGELKIADFGL-----ARAFGIPVRKYTHEI---VTLW 165
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEM 903
Y P + MGS+ S T D++S+G + EM
Sbjct: 166 YRAPDVL------------MGSKKYSTTIDIWSVGCIFAEM 194
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 98/238 (41%), Gaps = 47/238 (19%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+F +IG G FG V+K +G +K + + A + E + L H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAER----EVKALAKLDHVNIV 67
Query: 740 KIITVCSSIDF---------KGADFKALV--YEYMQNGSLEEWLHQSNGQP--EVCDLSL 786
D+ + K L E+ G+LE+W+ + G+ +V L L
Sbjct: 68 HYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALEL 127
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+++ +D Y+H +++ DLKPSN+ L + DFGL
Sbjct: 128 FEQITKGVD------YIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLV--------- 169
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
TS++ KGT+ Y+ P I+ +YG D+Y+LG++L E+
Sbjct: 170 TSLKNDGKRXRSKGTLRYMSPEQISSQ------DYGKEV------DLYALGLILAELL 215
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 168
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 210
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 211 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELL 251
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 103/225 (45%), Gaps = 32/225 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 105
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 162
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 163 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 204
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 205 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAEL 244
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 113
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 170
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 171 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 212
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 213 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELL 253
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 115
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 172
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 173 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 214
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 215 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELL 255
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 74/164 (45%), Gaps = 17/164 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAVKI++ Q +L+ E +++ H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFDT 847
Q IVH DLK N+LLD DM ++DFG + F F D
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDA 171
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Composition-based stats.
Identities = 68/278 (24%), Positives = 116/278 (41%), Gaps = 52/278 (18%)
Query: 671 YSELSEATNEFSSSNMIGQ-GSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEV 729
Y ++ N +IG+ G FG VYK E A K+++ + L+ ++ E ++
Sbjct: 1 YEHVTRDLNPEDFWEIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 60
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGS-------LEEWLHQSNGQPEVC 782
L + H N++K++ F + ++ E+ G+ LE L +S Q VC
Sbjct: 61 LASCDHPNIVKLLDA-----FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VC 114
Query: 783 DLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842
+L A+ YLH + I+H DLK N+L D ++DFG++ A
Sbjct: 115 KQTL-----------DALNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS----A 156
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902
+ T ++ + S I GT ++ P + E DV+SLG+ L+E
Sbjct: 157 KNTRTXIQRRDSFI---GTPYWMAP-------EVVMCETSKDRPYDYKADVWSLGITLIE 206
Query: 903 MFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSL 940
M P HE M + K+ ++ P+L
Sbjct: 207 MAEIEPPH----------HELNPMRVLLKIAKSEPPTL 234
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 113 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 213 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 255
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 256 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 305 PNFAIILERI 314
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 99 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 198
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 199 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 241
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 242 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 291 PNFAIILERI 300
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 78
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 79 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 135
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 136 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 116
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 117 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 172
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 173 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 218
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 219 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 55/265 (20%)
Query: 670 SYSELSEATNEFSSSNMI-----GQGSFGSVYKG----ILGENG-TFVAVKILNL-MQKG 718
++ L + EF N++ G+G FG V K + G G T VAVK+L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 719 ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-- 776
L+ ++E VL+ H ++IK+ CS G L+ EY + GSL +L +S
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKV 123
Query: 777 ----------------GQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSN 820
P+ L++ ++ A ++ ++YL + +VH DL N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 821 VLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLE 880
+L+ +SDFGL+R ++ E S +K + G +P +A +E
Sbjct: 181 ILVAEGRKMKISDFGLSRDVY--------EEDSX---VKRSQGRIPVKWMA-------IE 222
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFT 905
+ DV+S GV+L E+ T
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 103/226 (45%), Gaps = 32/226 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 156
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 213
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
+ Y+H I H D+KP N+LLD D V + DFG A+ L +
Sbjct: 214 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL---------------VRG 255
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
+ V Y+ ++ P L +G ++ + + DV+S G +L E+
Sbjct: 256 EPNVSYI----CSRYYRAPELIFG-ATDYTSSIDVWSAGCVLAELL 296
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKI-LNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G++G VYK TF KI L +G + + E +L+ +H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD--LSLIQRLNIAIDMASAIEYL 803
+ LV+E++ + L++ L +VC+ L + + + + + I Y
Sbjct: 70 HT-----KKRLVLVFEHL-DQDLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H ++H DLKP N+L++ + ++DFGL AR F + + + T+
Sbjct: 117 HDRR---VLHRDLKPQNLLINREGELKIADFGL-----ARAFGIPVRKYTHEV---VTLW 165
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEM 903
Y P + MGS+ S T D++S+G + EM
Sbjct: 166 YRAPDVL------------MGSKKYSTTIDIWSVGCIFAEM 194
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 77
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 134
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 135 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 113 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 213 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 255
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 256 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 305 PNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 99 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 198
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 199 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 241
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 242 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 291 PNFAIILERI 300
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 54
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 111 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 156
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 157 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 85
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 86 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 142
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 143 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 54
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 111 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 156
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 157 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 96
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 97 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 153
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 154 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/251 (22%), Positives = 100/251 (39%), Gaps = 60/251 (23%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+F +IG G FG V+K +G ++ + + A + E + L H N++
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAER----EVKALAKLDHVNIV 68
Query: 740 KIITVCSSIDF---------KGADFKA---------------LVYEYMQNGSLEEWLHQS 775
D+ + +D+ + E+ G+LE+W+ +
Sbjct: 69 HYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 776 NGQP--EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833
G+ +V L L +++ +D Y+H ++H DLKPSN+ L + D
Sbjct: 129 RGEKLDKVLALELFEQITKGVD------YIH---SKKLIHRDLKPSNIFLVDTKQVKIGD 179
Query: 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDV 893
FGL TS++ KGT+ Y+ P I+ +YG D+
Sbjct: 180 FGLV---------TSLKNDGKRTRSKGTLRYMSPEQISSQ------DYGKEV------DL 218
Query: 894 YSLGVMLLEMF 904
Y+LG++L E+
Sbjct: 219 YALGLILAELL 229
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 113 CIGVSLQSLP------RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 166
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 167 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 213 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 255
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 256 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 304
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 305 PNFAIILERI 314
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 81
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 82 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 138
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 139 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 54
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 111 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 156
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 157 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 54
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 111 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 156
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 157 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 81
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 82 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 137
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 138 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 183
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P + G+ SV D++S+G+ L+EM R P
Sbjct: 184 DSMANSFVGTRSYMSPERL------------QGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 101/221 (45%), Gaps = 40/221 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKI-LNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G++G VYK TF KI L +G + + E +L+ +H N++K+ V
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD--LSLIQRLNIAIDMASAIEYL 803
+ LV+E++ + L++ L +VC+ L + + + + + I Y
Sbjct: 70 HT-----KKRLVLVFEHL-DQDLKKLL-------DVCEGGLESVTAKSFLLQLLNGIAYC 116
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H ++H DLKP N+L++ + ++DFGL AR F + + + T+
Sbjct: 117 HDRR---VLHRDLKPQNLLINREGELKIADFGL-----ARAFGIPVRKYTHEV---VTLW 165
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEM 903
Y P + MGS+ S T D++S+G + EM
Sbjct: 166 YRAPDVL------------MGSKKYSTTIDIWSVGCIFAEM 194
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 18/157 (11%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L +S + E ++LR H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
C +G LV EY+ GSL ++L + + + L Q L A + +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
YLH +H +L NVLLD+D + + DFGLA+
Sbjct: 132 YLHSQ---HYIHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 146
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 90 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 143
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 144 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 189
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 190 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 232
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 233 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 282 PNFAIILERI 291
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G + + L + + E + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYI------ 119
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 166
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 167 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 210
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKII 742
S+++GQG+ +V++G + G A+K+ N + + + E EVL+ H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ---SNGQPEVCDLSLIQRLNIAIDMASA 799
+ + K L+ E+ GSL L + + G PE L +++ D+
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR------DVVGG 124
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ +L + IVH ++KP N++ D V ++DFG AR +E
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---------ELEDDEQF 172
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ + GT Y+ P M L + T D++S+GV T P
Sbjct: 173 VSLYGTEEYLHP----DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 54
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 55 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 110
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 111 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 156
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 157 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 68/265 (25%), Positives = 113/265 (42%), Gaps = 55/265 (20%)
Query: 670 SYSELSEATNEFSSSNMI-----GQGSFGSVYKG----ILGENG-TFVAVKILNL-MQKG 718
++ L + EF N++ G+G FG V K + G G T VAVK+L
Sbjct: 9 AFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPS 68
Query: 719 ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN-- 776
L+ ++E VL+ H ++IK+ CS G L+ EY + GSL +L +S
Sbjct: 69 ELRDLLSEFNVLKQVNHPHVIKLYGACSQ---DGPLL--LIVEYAKYGSLRGFLRESRKV 123
Query: 777 ----------------GQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSN 820
P+ L++ ++ A ++ ++YL + +VH DL N
Sbjct: 124 GPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARN 180
Query: 821 VLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLE 880
+L+ +SDFGL+R ++ E S +K + G +P +A +E
Sbjct: 181 ILVAEGRKMKISDFGLSRDVY--------EEDSY---VKRSQGRIPVKWMA-------IE 222
Query: 881 YGMGSEASVTGDVYSLGVMLLEMFT 905
+ DV+S GV+L E+ T
Sbjct: 223 SLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 84
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 85 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 135
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 136 G---VIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLV-GTPYWMA 184
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P I++ L YG D++SLG+M++EM
Sbjct: 185 PELISR------LPYG------PEVDIWSLGIMVIEM 209
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 93
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 94 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 144
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 145 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKX-LVGTPYWMA 193
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
P I++ LP G E D++SLG+M++EM P
Sbjct: 194 PELISR---LP-----YGPEV----DIWSLGIMVIEMVDGEPP 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 103/229 (44%), Gaps = 35/229 (15%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F +G+GS+GSVYK I E G VA+K + + + L+ + E +++ +++K
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPV--ESDLQEIIKEISIMQQCDSPHVVK 88
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
FK D +V EY GS+ + + N +++ I + + +
Sbjct: 89 YYGSY----FKNTDL-WIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTL-----KGL 138
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYLH + +H D+K N+LL+ + A ++DFG+A L + + + G
Sbjct: 139 EYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQL--------TDXMAKRNXVIG 187
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
T ++ P + + + C+ D++SLG+ +EM + P
Sbjct: 188 TPFWMAP-EVIQEIGYNCV-----------ADIWSLGITAIEMAEGKPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 55/223 (24%), Positives = 100/223 (44%), Gaps = 35/223 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 95
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 96 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 146
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 147 ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA-------QVSKEVPRRKX-LVGTPYWMA 195
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
P I++ LP G E D++SLG+M++EM P
Sbjct: 196 PELISR---LP-----YGPEV----DIWSLGIMVIEMVDGEPP 226
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 115
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 116 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SCHAPSS 162
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 163 RRTTLSGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 206
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 114/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 73
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 74 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 129
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L
Sbjct: 130 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 175
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+EM R P
Sbjct: 176 DSMANSFVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 105 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 158
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 159 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 204
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 205 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 247
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 248 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 296
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 297 PNFAIILERI 306
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 37/280 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGA-LKSFVAECEVLRNTRHR 736
+E+ IG G++G V G VA+K I N K + E ++L++ +H
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ--SNGQPEVCDLSLIQRLNIAI 794
N+I I + G +FK++ Y+ +E LHQ + QP L+L
Sbjct: 114 NIIAIKDILRPTVPYG-EFKSV---YVVLDLMESDLHQIIHSSQP----LTLEHVRYFLY 165
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+ ++Y+H ++H DLKPSN+L++ + + DFG+AR L P E Q
Sbjct: 166 QLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP----AEHQYF 218
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
T Y P ML+L E + D++S+G + EM RR+ +F
Sbjct: 219 MTEYVATRWYRAP---ELMLSL--------HEYTQAIDLWSVGCIFGEMLARRQ----LF 263
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE 954
G +H+ + + V+ T P+++ A R RA ++
Sbjct: 264 PGKNYVHQLQLIMM---VLGTPSPAVIQAVGAERVRAYIQ 300
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 89
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 90 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 146
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 147 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/159 (31%), Positives = 74/159 (46%), Gaps = 22/159 (13%)
Query: 687 IGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKS-FVAECEVLRNTRHRNLIKI 741
+G+G FG V Y G VAVK L +S + E ++LR H ++IK
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
C +G LV EY+ GSL ++L + + + L Q L A + +
Sbjct: 82 KGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMA 131
Query: 802 YLH--HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
YLH H+ +H +L NVLLD+D + + DFGLA+
Sbjct: 132 YLHAQHY-----IHRNLAARNVLLDNDRLVKIGDFGLAK 165
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 98 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 197
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 198 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 240
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 241 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 290 PNFAIILERI 299
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G + + L + + E QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPRGEVYKELQKLSKFDE-------QRTATY 118
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 165
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 166 SRRXXLXGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 210
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 12/162 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
++ + +IG GSFG VY+ L ++G VA+K ++Q K+ E +++R H N+++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIK--KVLQDKRFKN--RELQIMRKLDHCNIVR 111
Query: 741 I-ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ SS + K + LV +Y+ H S + L +I + +
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT---LPVIYVKLYMYQLFRS 168
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFL 840
+ Y+H I H D+KP N+LLD D V + DFG A+ L
Sbjct: 169 LAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 115 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 168
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 169 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 214
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 215 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 257
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 258 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 306
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 307 PNFAIILERI 316
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 98 CIGVSLQSLP------RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 151
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 152 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 197
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 198 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 240
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 241 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 290 PNFAIILERI 299
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 125 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 178
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++ +S
Sbjct: 179 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-----------RAS 224
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 225 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 267
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 268 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 316
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 317 PNFAIILERI 326
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 71/316 (22%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 139 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 192
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++
Sbjct: 193 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-------------- 235
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG------DVYSLGVMLLEMFTRRRP 909
GY G A ML + M EA + G D +S GV+L E+F+
Sbjct: 236 -----RAGYYRKGGCA-MLPV----KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---- 281
Query: 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
M P K + V L + G R + C V RI C
Sbjct: 282 -------------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 324
Query: 970 ESPIERMEMRDVLAKL 985
P +R +L ++
Sbjct: 325 HQPEDRPNFAIILERI 340
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 58.2 bits (139), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 124/280 (44%), Gaps = 37/280 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGA-LKSFVAECEVLRNTRHR 736
+E+ IG G++G V G VA+K I N K + E ++L++ +H
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ--SNGQPEVCDLSLIQRLNIAI 794
N+I I + G +FK++ Y+ +E LHQ + QP L+L
Sbjct: 115 NIIAIKDILRPTVPYG-EFKSV---YVVLDLMESDLHQIIHSSQP----LTLEHVRYFLY 166
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
+ ++Y+H ++H DLKPSN+L++ + + DFG+AR L P E Q
Sbjct: 167 QLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSP----AEHQYF 219
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
T Y P ML+L E + D++S+G + EM RR+ +F
Sbjct: 220 MTEYVATRWYRAP---ELMLSL--------HEYTQAIDLWSVGCIFGEMLARRQ----LF 264
Query: 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE 954
G +H+ + + V+ T P+++ A R RA ++
Sbjct: 265 PGKNYVHQLQLIMM---VLGTPSPAVIQAVGAERVRAYIQ 301
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 102/234 (43%), Gaps = 33/234 (14%)
Query: 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKII 742
S+++GQG+ +V++G + G A+K+ N + + + E EVL+ H+N++K+
Sbjct: 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLF 73
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ---SNGQPEVCDLSLIQRLNIAIDMASA 799
+ + K L+ E+ GSL L + + G PE L +++ D+
Sbjct: 74 AIEEETTTR---HKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLR------DVVGG 124
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ +L + IVH ++KP N++ D V ++DFG AR +E
Sbjct: 125 MNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---------ELEDDEQF 172
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ + GT Y+ P M L + T D++S+GV T P
Sbjct: 173 VXLYGTEEYLHP----DMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 117
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 164
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 165 RRAALCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 208
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 99/223 (44%), Gaps = 35/223 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 88
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 89 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 139
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 140 G---VIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLV-GTPYWMA 188
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
P I++ L YG D++SLG+M++EM P
Sbjct: 189 PELISR------LPYG------PEVDIWSLGIMVIEMVDGEPP 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 118/246 (47%), Gaps = 50/246 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V+K +G +A K+++L K A+++ +++R
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRN-----QIIRE------ 57
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 58 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE----QILGKVS 113
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL + I+H D+KPSN+L++ + DFG++ L M
Sbjct: 114 IAV--IKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI-----DEMAN 164
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR--RP 909
+ GT Y+ P E G+ SV D++S+G+ L+EM R RP
Sbjct: 165 E-----FVGTRSYMSP------------ERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRP 207
Query: 910 TNCMFQ 915
+F+
Sbjct: 208 PMAIFE 213
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAV+I++ Q +L+ E +++ H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFD 846
Q IVH DLK N+LLD DM ++DFG + F F D
Sbjct: 131 ---QKFIVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLD 170
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 61/219 (27%), Positives = 90/219 (41%), Gaps = 34/219 (15%)
Query: 693 GSVYKGILGENGTFVAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIITVCSSIDF 750
G ++KG G + VK+L + KS F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP 810
A L+ +M GSL LH+ G V D S Q + A+DMA + +L H +P
Sbjct: 79 PPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQS--QAVKFALDMARGMAFL-HTLEPL 133
Query: 811 IVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNI 870
I L +V++D DM A +S +F F P G +V P +
Sbjct: 134 IPRHALNSRSVMIDEDMTARIS-MADVKFSFQSP------------GRMYAPAWVAPEAL 180
Query: 871 AKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
K + D++S V+L E+ TR P
Sbjct: 181 QKKPE---------DTNRRSADMWSFAVLLWELVTREVP 210
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 102/231 (44%), Gaps = 38/231 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVA-ECEVLRNTRHRNLIKIIT 743
+G+GSFG V + VA+K ++ L++K + V E L+ RH ++IK+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V ++ D +V EY G L +++ + E Q++ AIEY
Sbjct: 77 VITT----PTDI-VMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQI------ICAIEYC 124
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
H H IVH DLKP N+LLD ++ ++DFGL+ + F ++T G+
Sbjct: 125 HRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF---LKTSC------GSPN 172
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914
Y P I L G E DV+S G++L M R P + F
Sbjct: 173 YAAPEVINGKLY-------AGPEV----DVWSCGIVLYVMLVGRLPFDDEF 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 114
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 161
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 162 SRRTDLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 67 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 114
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG + + DT
Sbjct: 115 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDT----- 166
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 167 -----LCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 206
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 39/290 (13%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 58 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 115
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLE--EWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+++ WL + + +R + +M
Sbjct: 116 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKKS------IDPWERKSYWKNM 164
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 165 LEAVHTIHQHG---IVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 217
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
G V Y+PP I M + E G S+ S DV+SLG +L M + P +
Sbjct: 218 ---GAVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN 272
Query: 916 GGLTL-------HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLV 958
L HE +PEK ++ V L D ++R + E L
Sbjct: 273 QISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLK--RDPKQRISIPELLA 320
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 108/243 (44%), Gaps = 40/243 (16%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH-- 735
++F ++GQG+FG V K + + A+K + ++ L + ++E +L + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQY 63
Query: 736 -----------RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784
RN +K +T K F + EY +NG+L + +H N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKK---KSTLFIQM--EYCENGTLYDLIHSENLNQQRDEY 118
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
+ R + A+ Y+H I+H DLKP N+ +D + DFGLA+ + R
Sbjct: 119 WRLFR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVH-RS 169
Query: 845 FDT-SMETQS---SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
D +++Q+ SS + +G A + L+ G G + D+YSLG++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIG------TAMYVATEVLD-GTG-HYNEKIDMYSLGIIF 221
Query: 901 LEM 903
EM
Sbjct: 222 FEM 224
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 127/316 (40%), Gaps = 71/316 (22%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 116 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 169
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+AR ++
Sbjct: 170 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY-------------- 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG------DVYSLGVMLLEMFTRRRP 909
GY G A ML + M EA + G D +S GV+L E+F+
Sbjct: 213 -----RAGYYRKGGCA-MLPV----KWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS---- 258
Query: 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
M P K + V L + G R + C V RI C
Sbjct: 259 -------------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQ 301
Query: 970 ESPIERMEMRDVLAKL 985
P +R +L ++
Sbjct: 302 HQPEDRPNFAIILERI 317
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 39/178 (21%)
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E +L++ H N+IK+ V F+ + LV E+ + G L E + + E CD +
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIINRHKFDE-CDAA 149
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFA 842
NI + S I YLH H IVH D+KP N+LL++ + + DFGL+ F F+
Sbjct: 150 -----NIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSF-FS 200
Query: 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
+ + GT Y+ P + K N C DV+S GV++
Sbjct: 201 KDYKLRDRL--------GTAYYIAPEVLKKKYNEKC-------------DVWSCGVIM 237
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 215
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 216 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 266
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 267 G---VIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLV-GTPYWMA 315
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P I++ L YG D++SLG+M++EM
Sbjct: 316 PELISR------LPYG------PEVDIWSLGIMVIEM 340
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 114
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 161
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 162 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 205
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 77 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 133
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 134 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE-Q 187
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 188 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH- 243
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 244 -IDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 286
Query: 904 FT 905
FT
Sbjct: 287 FT 288
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 118
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 165
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 166 SRRTDLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 114
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 115 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 161
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 162 RRTELCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 205
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 101/242 (41%), Gaps = 41/242 (16%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECE 728
S+ A +F +G+G FG+VY ++ +A+K+L L + G E E
Sbjct: 5 SKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQ 788
+ + RH N++++ F A L+ EY G++ L + + E Q
Sbjct: 65 IQSHLRHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------Q 112
Query: 789 RLNIAI-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
R I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 113 RTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------S 159
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
S + GT+ Y+PP I G + V D++SLGV+ E +
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGK 207
Query: 908 RP 909
P
Sbjct: 208 PP 209
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
+ F ++G+G FG V+ + G A K LN + K + + E ++L
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
R ++ + + F+ LV M G + H N + + +
Sbjct: 245 RFIVSL-----AYAFETKTDLCLVMTIMNGGDIR--YHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ S +E+LH Q I++ DLKP NVLLD D +SD GLA L A Q+ +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--------GQTKT 346
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
G GT G++ P E +G E + D ++LGV L EM R P
Sbjct: 347 KGYAGTPGFMAP------------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS-----------NGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + PE
Sbjct: 93 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEE-Q 146
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHH- 202
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 203 -IDXXKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 245
Query: 904 FT 905
FT
Sbjct: 246 FT 247
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 48/265 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G+FG VYK E G A K++ + L+ ++ E E+L H ++K++
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 74
Query: 747 SIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
GA + ++ E+ G+++ + + + + ++ R M A+ +
Sbjct: 75 -----GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNF 124
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
LH I+H DLK NVL+ + ++DFG++ A+ T ++ + S I GT
Sbjct: 125 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKT-LQKRDSFI---GTP 173
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHE 922
++ P + E + D++SLG+ L+EM P HE
Sbjct: 174 YWMAP-------EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH----------HE 216
Query: 923 FCKMALPEKVMETVDPSLLL--AWS 945
M + K+ ++ P+LL WS
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPSKWS 241
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 62/265 (23%), Positives = 114/265 (43%), Gaps = 48/265 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G+FG VYK E G A K++ + L+ ++ E E+L H ++K++
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLL---- 82
Query: 747 SIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
GA + ++ E+ G+++ + + + + ++ R M A+ +
Sbjct: 83 -----GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR-----QMLEALNF 132
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
LH I+H DLK NVL+ + ++DFG++ A+ T ++ + S I GT
Sbjct: 133 LH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKT-LQKRDSFI---GTP 181
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHE 922
++ P + E + D++SLG+ L+EM P HE
Sbjct: 182 YWMAP-------EVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPH----------HE 224
Query: 923 FCKMALPEKVMETVDPSLLL--AWS 945
M + K+ ++ P+LL WS
Sbjct: 225 LNPMRVLLKIAKSDPPTLLTPSKWS 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP--EVC---------D 783
H+N+I ++ C+ G + ++ EY G+L E+L Q+ P E C
Sbjct: 93 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 146
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 201
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 202 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 245
Query: 904 FT 905
FT
Sbjct: 246 FT 247
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 65/242 (26%), Positives = 109/242 (45%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 21 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 77
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP--EVC---------D 783
H+N+I ++ C+ G + ++ EY G+L E+L Q+ P E C
Sbjct: 78 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYL-QARRPPGLEYCYNPSHNPEEQ 131
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 132 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 186
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 187 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 230
Query: 904 FT 905
FT
Sbjct: 231 FT 232
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR-----KV 186
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 187 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 235 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 274
Query: 978 MRDVL 982
+RD L
Sbjct: 275 LRDFL 279
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHR-----KV 176
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 177 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 225 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 264
Query: 978 MRDVL 982
+RD L
Sbjct: 265 LRDFL 269
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V + +G VAVK ++L ++ + E ++R+ +H N++++
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYN--- 138
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ LH
Sbjct: 139 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIAAVCLAVLQALSVLHAQ 189
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL HD +SDFG S E + GT ++
Sbjct: 190 G---VIHRDIKSDSILLTHDGRVKLSDFGFC-------AQVSKEVPRRKXLV-GTPYWMA 238
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P I++ L YG D++SLG+M++EM
Sbjct: 239 PELISR------LPYG------PEVDIWSLGIMVIEM 263
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 113/238 (47%), Gaps = 48/238 (20%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F + +G G+ G V K +G +A K+++L K A+++ +++R
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRN-----QIIRE------ 64
Query: 739 IKIITVCSS---IDFKGADFK----ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
++++ C+S + F GA + ++ E+M GSL++ L ++ PE ++ +++
Sbjct: 65 LQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPE----EILGKVS 120
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMET 851
IA+ + YL Q I+H D+KPSN+L++ + DFG++ L
Sbjct: 121 IAV--LRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVSGQLI---------- 166
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT Y+ P E G+ SV D++S+G+ L+E+ R P
Sbjct: 167 DSMANSFVGTRSYMAP------------ERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 74/298 (24%), Positives = 120/298 (40%), Gaps = 64/298 (21%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVK--ILNLMQKGALKSFVAECE---VLRNTR 734
E ++G G FG+V+KG+ G + + I + K +SF A + + +
Sbjct: 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD 73
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNI 792
H ++++++ +C + LV +Y+ GSL + + Q G P++ LN
Sbjct: 74 HAHIVRLLGLCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLL-------LNW 120
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL H +VH +L NVLL V+DFG+A L P D +
Sbjct: 121 GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL--PPDDKQLLYS 175
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911
+ I K + L + +G + S DV+S GV + E+ T P
Sbjct: 176 EAKTPI-------------KWMALESIHFGKYTHQS---DVWSYGVTVWELMTFGAEP-- 217
Query: 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSM 969
GL L E P LL G R A+ + C + V + V C M
Sbjct: 218 ---YAGLRLAEV--------------PDLL---EKGERLAQPQICTIDVYMVMVKCWM 255
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 117
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 164
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 165 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 208
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
+ F ++G+G FG V+ + G A K LN + K + + E ++L
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
R ++ + + F+ LV M G + H N + + +
Sbjct: 245 RFIVSL-----AYAFETKTDLCLVMTIMNGGDIR--YHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ S +E+LH Q I++ DLKP NVLLD D +SD GLA L A Q+ +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--------GQTKT 346
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
G GT G++ P E +G E + D ++LGV L EM R P
Sbjct: 347 KGYAGTPGFMAP------------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 108/238 (45%), Gaps = 45/238 (18%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHR 736
++ IG+G++G+V+K E VA+K + L +G S + E +L+ +H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 737 NLIKIITVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIA 793
N++++ V S D K LV+E+ + L+++ NG PE+ L Q L
Sbjct: 62 NIVRLHDVLHS------DKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLL--- 111
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ + H ++H DLKP N+L++ + +++FGL AR F + S
Sbjct: 112 ----KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGL-----ARAFGIPVRCYS 159
Query: 854 SSIGIKGTVGYVPPGNI--AKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ + T+ Y PP + AK+ S + D++S G + E+ RP
Sbjct: 160 AEV---VTLWYRPPDVLFGAKLY-------------STSIDMWSAGCIFAELANAGRP 201
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 96/232 (41%), Gaps = 33/232 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRHRN 737
F ++G+G FG V+ + G A K LN + K + + E ++L R
Sbjct: 187 FLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRF 246
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
++ + + F+ LV M G + H N + + + +
Sbjct: 247 IVSL-----AYAFETKTDLCLVMTIMNGGDIR--YHIYNVDEDNPGFQEPRAIFYTAQIV 299
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
S +E+LH Q I++ DLKP NVLLD D +SD GLA L A Q+ + G
Sbjct: 300 SGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--------GQTKTKG 348
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT G++ P E +G E + D ++LGV L EM R P
Sbjct: 349 YAGTPGFMAP------------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 97/234 (41%), Gaps = 33/234 (14%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
+ F ++G+G FG V+ + G A K LN + K + + E ++L
Sbjct: 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHS 244
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
R ++ + + F+ LV M G + H N + + +
Sbjct: 245 RFIVSL-----AYAFETKTDLCLVMTIMNGGDIR--YHIYNVDEDNPGFQEPRAIFYTAQ 297
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ S +E+LH Q I++ DLKP NVLLD D +SD GLA L A Q+ +
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA--------GQTKT 346
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
G GT G++ P E +G E + D ++LGV L EM R P
Sbjct: 347 KGYAGTPGFMAP------------ELLLGEEYDFSVDYFALGVTLYEMIAARGP 388
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 119
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL ++DFG + S
Sbjct: 120 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPSS 166
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 167 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 210
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VA+KI++ Q +L+ E +++ H N++K+ V
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ L+ EY G + ++L E S +++ SA++Y H
Sbjct: 80 IET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQYCH 128
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
Q IVH DLK N+LLD DM ++DFG +
Sbjct: 129 ---QKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 71 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 118
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 119 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 165
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I G D++SLGV+ E + P
Sbjct: 166 SRRTTLCGTLDYLPPEXIE------------GRXHDEKVDLWSLGVLCYEFLVGKPP 210
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 80 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 128
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 129 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KV 180
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 181 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 228
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 229 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 268
Query: 978 MRDVL 982
+RD L
Sbjct: 269 LRDFL 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KV 176
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 177 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 225 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 264
Query: 978 MRDVL 982
+RD L
Sbjct: 265 LRDFL 269
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 86 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 135 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KV 186
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 187 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 234
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 235 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 274
Query: 978 MRDVL 982
+RD L
Sbjct: 275 LRDFL 279
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRAALCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 79/305 (25%), Positives = 114/305 (37%), Gaps = 60/305 (19%)
Query: 687 IGQGSFGSVYKG---ILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIK 740
+G GSFG V +G VAVK L L Q A+ F+ E + + HRNLI+
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V + K +V E GSL + L + G + LS A+ +A +
Sbjct: 76 LYGVVLTPPMK------MVTELAPLGSLLDRLRKHQGHFLLGTLS-----RYAVQVAEGM 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
YL +H DL N+LL + + DFGL R L M+ K
Sbjct: 125 GYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHR-----KV 176
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
+ P + L+ S AS D + GV L EMFT + G L
Sbjct: 177 PFAWCAPES---------LKTRTFSHAS---DTWMFGVTLWEMFTYGQEPWIGLNGSQIL 224
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---ME 977
H+ K +G R + E+C + + V C P +R +
Sbjct: 225 HKIDK--------------------EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVA 264
Query: 978 MRDVL 982
+RD L
Sbjct: 265 LRDFL 269
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VA+KI++ Q +L+ E +++ H N++K+ V
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ L+ EY G + ++L E S +++ SA++Y H
Sbjct: 83 IET-----EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQI------VSAVQYCH 131
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
Q IVH DLK N+LLD DM ++DFG +
Sbjct: 132 ---QKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 65/261 (24%), Positives = 111/261 (42%), Gaps = 52/261 (19%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G+FG VYK E A K+++ + L+ ++ E ++L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 747 SIDFKGADFKALVYEYMQNGS-------LEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
F + ++ E+ G+ LE L +S Q VC +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+ YLH + I+H DLK N+L D ++DFG++ A+ T ++ + S I
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRT-IQRRDSFI--- 196
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
GT ++ P + E DV+SLG+ L+EM P
Sbjct: 197 GTPYWMAP-------EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--------- 240
Query: 920 LHEFCKMALPEKVMETVDPSL 940
HE M + K+ ++ P+L
Sbjct: 241 -HELNPMRVLLKIAKSEPPTL 260
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 128/310 (41%), Gaps = 59/310 (19%)
Query: 687 IGQGSFGSVYKGILG-----ENGTFVAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIK 740
+G G+FG VY+G + + VAVK L + + F+ E ++ H+N+++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 741 IITVC-SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMAS 798
I V S+ + ++ E M G L+ +L ++ +P + L+++ L++A D+A
Sbjct: 99 CIGVSLQSLP------RFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIAC 152
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+YL + +H D+ N LL VA + DFG+A+ ++ +S
Sbjct: 153 GCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIY-----------RAS 198
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +P + +P + G S T D +S GV+L E+F+
Sbjct: 199 YYRKGGCAMLP------VKWMPPEAFMEGIFTSKT-DTWSFGVLLWEIFS---------- 241
Query: 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975
M P K + V L + G R + C V RI C P +R
Sbjct: 242 -------LGYMPYPSKSNQEV----LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
Query: 976 MEMRDVLAKL 985
+L ++
Sbjct: 291 PNFAIILERI 300
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 10 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 67
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGS--LEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+ L WL + + +R + +M
Sbjct: 68 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 116
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 117 LEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 169
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRP 909
GTV Y+PP I M + E G S+ S DV+SLG +L M + P
Sbjct: 170 ---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 218
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 71/244 (29%), Positives = 112/244 (45%), Gaps = 30/244 (12%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECE 728
+ +S +S IG G V++ +L E A+K +NL + L S+ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGS--LEEWLHQSNGQPEVCDLSL 786
L N ++ KII + D++ D +Y M+ G+ L WL + +
Sbjct: 79 YL-NKLQQHSDKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDP 126
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+R + +M A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P D
Sbjct: 127 WERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-D 179
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFT 905
T+ + S + GTV Y+PP I M + E G S+ S DV+SLG +L M
Sbjct: 180 TTSVVKDSQV---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 906 RRRP 909
+ P
Sbjct: 235 GKTP 238
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRTDLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRTDLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 56.6 bits (135), Expect = 8e-08, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 672 SELSEATNE------FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSF 723
+ ++ AT+E + IG+G+F V G VAVKI++ Q +L+
Sbjct: 2 NSITSATDEQPHIGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKL 61
Query: 724 VAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD 783
E +++ H N++K+ V + LV EY G + ++L E
Sbjct: 62 FREVRIMKILNHPNIVKLFEVIET-----EKTLYLVMEYASGGEVFDYLVAHGRMKEKEA 116
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFA 842
+ +++ SA++Y H Q IVH DLK N+LLD DM ++DFG + F
Sbjct: 117 RAKFRQI------VSAVQYCH---QKYIVHRDLKAENLLLDGDMNIKIADFGFSNEFTVG 167
Query: 843 RPFDT 847
DT
Sbjct: 168 NKLDT 172
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 83 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 130
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 131 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 177
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 178 SRRTTLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 222
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 65 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 112
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 113 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 159
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 160 SRRTTLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 204
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 116
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 163
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 164 SRRTTLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 208
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 139
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 186
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 187 SRRTTLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 231
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 56.2 bits (134), Expect = 8e-08, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRTXLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 70/234 (29%), Positives = 109/234 (46%), Gaps = 30/234 (12%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNL 738
+S IG G V++ +L E A+K +NL + L S+ E L N ++
Sbjct: 14 YSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYL-NKLQQHS 71
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGS--LEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
KII + D++ D +Y M+ G+ L WL + + +R + +M
Sbjct: 72 DKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDPWERKSYWKNM 120
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P DT+ + S +
Sbjct: 121 LEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-DTTSVVKDSQV 173
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFTRRRP 909
GTV Y+PP I M + E G S+ S DV+SLG +L M + P
Sbjct: 174 ---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTYGKTP 222
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 28 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 84
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 85 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE-Q 138
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 139 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 193
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 194 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 237
Query: 904 FT 905
FT
Sbjct: 238 FT 239
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 25 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 81
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 82 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE-Q 135
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 136 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 190
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 191 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 234
Query: 904 FT 905
FT
Sbjct: 235 FT 236
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 93 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEE-Q 146
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 201
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 202 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 245
Query: 904 FT 905
FT
Sbjct: 246 FT 247
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 36 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 92
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 93 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE-Q 146
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 147 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 201
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 202 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 245
Query: 904 FT 905
FT
Sbjct: 246 FT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 63/242 (26%), Positives = 108/242 (44%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-R 734
+G+G+FG V +L E T VAVK+L + L ++E E+++ +
Sbjct: 29 LGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGK 85
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + + PE
Sbjct: 86 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE-Q 139
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
LS ++ A +A +EYL +H DL NVL+ D V ++DFGLAR +
Sbjct: 140 LSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDI--H 194
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P + + + DV+S GV+L E+
Sbjct: 195 HIDYYKKTTNGRLPVK----WMAPEALFDRI------------YTHQSDVWSFGVLLWEI 238
Query: 904 FT 905
FT
Sbjct: 239 FT 240
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 108/228 (47%), Gaps = 42/228 (18%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLI---K 740
+ +G+G++ +VYKG VA+K + L ++GA + + E +L++ +H N++
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
II S+ LV+EY+ + L+++L ++I N+ + + +
Sbjct: 68 IIHTEKSL--------TLVFEYL-DKDLKQYLDDCG--------NIINMHNVKLFLFQLL 110
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
L + + ++H DLKP N+L++ ++DFGLAR S+ T++ +
Sbjct: 111 RGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLAR-------AKSIPTKTYDNEV-V 162
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGS-EASVTGDVYSLGVMLLEMFTRR 907
T+ Y PP + +GS + S D++ +G + EM T R
Sbjct: 163 TLWYRPPDIL------------LGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGIL---GENGTF-VAVKILNL-MQKGALKSFVAECEVLRNT 733
E ++G G+FG+VYKGI GEN VA+K+L A K + E V+
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ +++ +C + + LV + M G L + + ++ G+ DL LN
Sbjct: 77 GSPYVSRLLGICLTSTVQ------LVTQLMPYGCLLDHVRENRGRLGSQDL-----LNWC 125
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLAR L D ET+
Sbjct: 126 MQIAKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLARLL-----DID-ETEY 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP +A LE + + DV+S GV + E+ T
Sbjct: 177 HADG-----GKVPIKWMA-------LESILRRRFTHQSDVWSYGVTVWELMT 216
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRXXLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 116
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 163
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 164 SRRXXLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 208
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 115
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 116 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 162
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 163 SRRXXLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 207
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 97/223 (43%), Gaps = 35/223 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V G VAVK ++L ++ + E ++R+ H N++ + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYS--- 109
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ D +V E+++ G+L + + + E Q + + + A+ YLH+
Sbjct: 110 --SYLVGDELWVVMEFLEGGALTDIVTHTRMNEE-------QIATVCLSVLRALSYLHNQ 160
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL D +SDFG S E + GT ++
Sbjct: 161 G---VIHRDIKSDSILLTSDGRIKLSDFGFC-------AQVSKEVPKRKXLV-GTPYWMA 209
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
P I++ L YG D++SLG+M++EM P
Sbjct: 210 PEVISR------LPYG------TEVDIWSLGIMVIEMIDGEPP 240
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY + +A+K+L L + G E E+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 63 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 110
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 111 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 157
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 158 SRRTTLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 202
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 95/225 (42%), Gaps = 42/225 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G G++G+V + G G VA+K L + L K E +L++ RH N+I ++ V
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 745 CSSI----DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ DF DF LV +M + H+ G+ + L M +
Sbjct: 93 FTPDETLDDF--TDF-YLVMPFMGTDLGKLMKHEKLGEDRIQFL--------VYQMLKGL 141
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
Y+H I+H DLKP N+ ++ D + DFGLAR + S G
Sbjct: 142 RYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR-----------QADSEMXGXVV 187
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T Y P I L + Y + T D++S+G ++ EM T
Sbjct: 188 TRWYRAPEVI-----LNWMRY------TQTVDIWSVGCIMAEMIT 221
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 32/242 (13%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECE 728
E+ +F +IG+G+FG V + A+KILN ++++ F E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-PEVCDLSLI 787
VL N + IT F+ + LV +Y G L L + + PE I
Sbjct: 127 VLVNGD----CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI 181
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
+ +AID +I LH+ VH D+KP NVLLD + ++DFG +
Sbjct: 182 GEMVLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKM------N 226
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T SS+ + GT Y+ P + M E GMG D +SLGV + EM
Sbjct: 227 DDGTVQSSVAV-GTPDYISPEILQAM------EDGMGKYGP-ECDWWSLGVCMYEMLYGE 278
Query: 908 RP 909
P
Sbjct: 279 TP 280
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRH 735
+F +G+G FG+VY ++ +A+K+L L + G E E+ + RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI- 794
N++++ F A L+ EY G++ L + + E QR I
Sbjct: 72 PNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDE-------QRTATYIT 119
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSS 854
++A+A+ Y H ++H D+KP N+LL + ++DFG + S
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGW----------SVHAPSSR 166
Query: 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT+ Y+PP I G + V D++SLGV+ E
Sbjct: 167 RTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEF 203
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 32/242 (13%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECE 728
E+ +F +IG+G+FG V + A+KILN ++++ F E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-PEVCDLSLI 787
VL N + IT F+ + LV +Y G L L + + PE I
Sbjct: 143 VLVNGD----CQWITALHYA-FQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYI 197
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
+ +AID +I LH+ VH D+KP NVLLD + ++DFG +
Sbjct: 198 GEMVLAID---SIHQLHY------VHRDIKPDNVLLDVNGHIRLADFGSCLKM------N 242
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T SS+ + GT Y+ P + M E GMG D +SLGV + EM
Sbjct: 243 DDGTVQSSVAV-GTPDYISPEILQAM------EDGMGKYGP-ECDWWSLGVCMYEMLYGE 294
Query: 908 RP 909
P
Sbjct: 295 TP 296
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 104/246 (42%), Gaps = 30/246 (12%)
Query: 668 MVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFV 724
+V E+ ++F +IG+G+F V + + G A+KI+N ++++G + F
Sbjct: 50 VVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFR 109
Query: 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-PEVCD 783
E +VL N R + ++ F+ ++ LV EY G L L + + P
Sbjct: 110 EERDVLVNGDRRWITQL-----HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMA 164
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
+ + +AID + Y VH D+KP N+LLD ++DFG L A
Sbjct: 165 RFYLAEIVMAIDSVHRLGY---------VHRDIKPDNILLDRCGHIRLADFGSCLKLRA- 214
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ S+ GT Y+ P I + + G E D ++LGV EM
Sbjct: 215 ------DGTVRSLVAVGTPDYLSP-EILQAVGGGPGTGSYGPEC----DWWALGVFAYEM 263
Query: 904 FTRRRP 909
F + P
Sbjct: 264 FYGQTP 269
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 108/261 (41%), Gaps = 52/261 (19%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G+FG VYK E A K+++ + L+ ++ E ++L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 747 SIDFKGADFKALVYEYMQNGS-------LEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
F + ++ E+ G+ LE L +S Q VC +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+ YLH + I+H DLK N+L D ++DFG++ ++ + S IG
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-----KNTRXIQRRDSFIG-- 197
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
T ++ P + E DV+SLG+ L+EM P
Sbjct: 198 -TPYWMAP-------EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--------- 240
Query: 920 LHEFCKMALPEKVMETVDPSL 940
HE M + K+ ++ P+L
Sbjct: 241 -HELNPMRVLLKIAKSEPPTL 260
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 70/278 (25%), Positives = 125/278 (44%), Gaps = 55/278 (19%)
Query: 679 NEFSSSNMIGQGSFGSVY---KGILGENGTFVAVKILNLMQKGALK-----SFVAECEVL 730
+ F ++GQGSFG V+ K ++G A+K+L +K LK E ++L
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVL---KKATLKVRDRVRTKMERDIL 84
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+ H ++K+ F+ L+ ++++ G L L + EV +
Sbjct: 85 ADVNHPFVVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKF 134
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++A +++LH I++ DLKP N+LLD + ++DFGL++ +++
Sbjct: 135 YLA-ELALGLDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------EAID 182
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ + GTV Y+ P + + + S + D +S GV++ EM T P
Sbjct: 183 HEKKAYSFCGTVEYMAPEVVNRQGH------------SHSADWWSYGVLMFEMLTGSLP- 229
Query: 911 NCMFQGG-----LTLHEFCKMALPEKVMETVDPSLLLA 943
FQG +TL K+ +P+ + T SLL A
Sbjct: 230 ---FQGKDRKETMTLILKAKLGMPQ-FLSTEAQSLLRA 263
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 92 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 139
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 140 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 186
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 187 SRRDDLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 231
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.5 bits (132), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E QR
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 116
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 117 ITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 163
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 164 SRRDDLCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 208
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 106/261 (40%), Gaps = 52/261 (19%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G+FG VYK E A K+++ + L+ ++ E ++L + H N++K++
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDA-- 102
Query: 747 SIDFKGADFKALVYEYMQNGS-------LEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
F + ++ E+ G+ LE L +S Q VC +L A
Sbjct: 103 ---FYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV-VCKQTL-----------DA 147
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+ YLH + I+H DLK N+L D ++DFG++ + Q I
Sbjct: 148 LNYLHDN---KIIHRDLKAGNILFTLDGDIKLADFGVSA-------KNTRXIQRRDXFI- 196
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919
GT ++ P + E DV+SLG+ L+EM P
Sbjct: 197 GTPYWMAP-------EVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPH--------- 240
Query: 920 LHEFCKMALPEKVMETVDPSL 940
HE M + K+ ++ P+L
Sbjct: 241 -HELNPMRVLLKIAKSEPPTL 260
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 48/232 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILN---LMQKGALKSFVAECEVLR 731
++ + ++G+GSFG V IL ++ G AVK+++ + QK +S + E ++L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N++K+ F+ + LV E G L + + EV +I+++
Sbjct: 82 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV- 135
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTS 848
S I Y+H + IVH DLKP N+LL+ D + DFGL+ T
Sbjct: 136 -----LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------TH 178
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
E GT Y+ P + + C DV+S GV+L
Sbjct: 179 FEASKKMKDKIGTAYYIAPEVLHGTYDEKC-------------DVWSTGVIL 217
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 55.5 bits (132), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/232 (26%), Positives = 95/232 (40%), Gaps = 46/232 (19%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+ +G+G+FGSV Y + G VAVK L + F E ++L+ H + I
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILK-ALHSDFI- 70
Query: 741 IITVCSSIDFKGADFKA------LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
+ ++G + LV EY+ +G L ++L + + + L L
Sbjct: 71 -------VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS----- 118
Query: 795 DMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +EYL C VH DL N+L++ + ++DFGLA+ L P D
Sbjct: 119 QICKGMEYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDXXVVR 171
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G Y P L + S S DV+S GV+L E+FT
Sbjct: 172 EP-GQSPIFWYAPES----------LSDNIFSRQS---DVWSFGVVLYELFT 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 59/237 (24%), Positives = 98/237 (41%), Gaps = 41/237 (17%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY + +A+K+L L + G E E+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F + L+ EY G++ L + + E QR
Sbjct: 66 RHPNILRLYGY-----FHDSTRVYLILEYAPLGTVYRELQKLSKFDE-------QRTATY 113
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
I ++A+A+ Y H ++H D+KP N+LL ++DFG +
Sbjct: 114 ITELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGW----------SVHAPS 160
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
S + GT+ Y+PP I E M E D++SLGV+ E + P
Sbjct: 161 SRRAALCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGKPP 205
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 41/234 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRHR 736
+F +G+G FG+VY ++ +A+K+L L + G E E+ + RH
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI-D 795
N++++ F A L+ EY G++ L + + E QR I +
Sbjct: 73 NILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSRFDE-------QRTATYITE 120
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+A+A+ Y H ++H D+KP N+LL + ++DFG + + DT
Sbjct: 121 LANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDT-------- 169
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I E M E D++SLGV+ E P
Sbjct: 170 --LCGTLDYLPPEMI---------EGRMHDEKV---DLWSLGVLCYEFLVGMPP 209
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 109/264 (41%), Gaps = 37/264 (14%)
Query: 653 KQESSISVPMEQYFPMVS-YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKI 711
++E +I +E P S ++ +F +IG+G+FG V L A+KI
Sbjct: 47 RREKNILEYLEWAKPFTSKVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKI 106
Query: 712 LN---LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL 768
LN ++++ F E +VL N + + + F+ + LV +Y G L
Sbjct: 107 LNKWEMLKRAETACFREERDVLVNGDSKWITTL-----HYAFQDDNNLYLVMDYYVGGDL 161
Query: 769 EEWLHQSNGQ-PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827
L + + PE + + IAID + Y VH D+KP N+L+D +
Sbjct: 162 LTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMNG 212
Query: 828 VAHVSDFGLARFLFARPFDTSME--TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGS 885
++DFG L ME T SS+ + GT Y+ P + M E G G
Sbjct: 213 HIRLADFGSCLKL--------MEDGTVQSSVAV-GTPDYISPEILQAM------EGGKGR 257
Query: 886 EASVTGDVYSLGVMLLEMFTRRRP 909
D +SLGV + EM P
Sbjct: 258 YGP-ECDWWSLGVCMYEMLYGETP 280
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 68/258 (26%), Positives = 108/258 (41%), Gaps = 47/258 (18%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS----FVAECEVLRNTRHRNLIKII 742
IG+GSF +VYKG+ E T V V L + KS F E E L+ +H N+++
Sbjct: 34 IGRGSFKTVYKGLDTE--TTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFY 91
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
S KG LV E +G+L+ +L + +V + +++ + + +++
Sbjct: 92 DSWEST-VKGKKCIVLVTELXTSGTLKTYLKRF----KVXKIKVLR--SWCRQILKGLQF 144
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
LH PPI+H DLK N+ + + D GLA +++ S + + GT
Sbjct: 145 LHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----------TLKRASFAKAVIGT 193
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP-TNCM------- 913
+ P Y + SV DVY+ G LE T P + C
Sbjct: 194 PEFXAPE-----------XYEEKYDESV--DVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
Query: 914 -FQGGLTLHEFCKMALPE 930
G+ F K+A+PE
Sbjct: 241 RVTSGVKPASFDKVAIPE 258
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 54/265 (20%)
Query: 679 NEFSSSNMIGQGSFGSVY--KGILGENG-TFVAVKILNLMQKGALK-----SFVAECEVL 730
++F ++GQGSFG V+ K I G + A+K+L +K LK E ++L
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDIL 81
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H ++K+ F+ L+ ++++ G L L + EV +
Sbjct: 82 VEVNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKF 131
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++A A+++LH I++ DLKP N+LLD + ++DFGL++ S++
Sbjct: 132 YLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------ESID 179
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ + GTV Y+ P + + + + + D +S GV++ EM T P
Sbjct: 180 HEKKAYSFCGTVEYMAPEVVNRRGH------------TQSADWWSFGVLMFEMLTGTLP- 226
Query: 911 NCMFQGG-----LTLHEFCKMALPE 930
FQG +T+ K+ +P+
Sbjct: 227 ---FQGKDRKETMTMILKAKLGMPQ 248
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 54/265 (20%)
Query: 679 NEFSSSNMIGQGSFGSVY--KGILGENG-TFVAVKILNLMQKGALK-----SFVAECEVL 730
++F ++GQGSFG V+ K I G + A+K+L +K LK E ++L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDIL 80
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H ++K+ F+ L+ ++++ G L L + EV +
Sbjct: 81 VEVNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKF 130
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++A A+++LH I++ DLKP N+LLD + ++DFGL++ S++
Sbjct: 131 YLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------ESID 178
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ + GTV Y+ P + + + + + D +S GV++ EM T P
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVNRRGH------------TQSADWWSFGVLMFEMLTGTLP- 225
Query: 911 NCMFQGG-----LTLHEFCKMALPE 930
FQG +T+ K+ +P+
Sbjct: 226 ---FQGKDRKETMTMILKAKLGMPQ 247
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Composition-based stats.
Identities = 66/265 (24%), Positives = 120/265 (45%), Gaps = 54/265 (20%)
Query: 679 NEFSSSNMIGQGSFGSVY--KGILGENG-TFVAVKILNLMQKGALK-----SFVAECEVL 730
++F ++GQGSFG V+ K I G + A+K+L +K LK E ++L
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVL---KKATLKVRDRVRTKMERDIL 80
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H ++K+ F+ L+ ++++ G L L + EV +
Sbjct: 81 VEVNHPFIVKL-----HYAFQTEGKLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKF 130
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A ++A A+++LH I++ DLKP N+LLD + ++DFGL++ S++
Sbjct: 131 YLA-ELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSK--------ESID 178
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ + GTV Y+ P + + + + + D +S GV++ EM T P
Sbjct: 179 HEKKAYSFCGTVEYMAPEVVNRRGH------------TQSADWWSFGVLMFEMLTGTLP- 225
Query: 911 NCMFQGG-----LTLHEFCKMALPE 930
FQG +T+ K+ +P+
Sbjct: 226 ---FQGKDRKETMTMILKAKLGMPQ 247
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 48/232 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILN---LMQKGALKSFVAECEVLR 731
++ + ++G+GSFG V IL ++ G AVK+++ + QK +S + E ++L+
Sbjct: 49 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 105
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N++K+ F+ + LV E G L + + EV +I+++
Sbjct: 106 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV- 159
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTS 848
S I Y+H + IVH DLKP N+LL+ D + DFGL+ T
Sbjct: 160 -----LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------TH 202
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
E GT Y+ P + + C DV+S GV+L
Sbjct: 203 FEASKKMKDKIGTAYYIAPEVLHGTYDEKC-------------DVWSTGVIL 241
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 69 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 117
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL +++FG + S
Sbjct: 118 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW----------SVHAPSS 164
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 165 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 208
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 100/232 (43%), Gaps = 48/232 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILN---LMQKGALKSFVAECEVLR 731
++ + ++G+GSFG V IL ++ G AVK+++ + QK +S + E ++L+
Sbjct: 48 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 104
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N++K+ F+ + LV E G L + + EV +I+++
Sbjct: 105 QLDHPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV- 158
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTS 848
S I Y+H + IVH DLKP N+LL+ D + DFGL+ T
Sbjct: 159 -----LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------TH 201
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
E GT Y+ P + + C DV+S GV+L
Sbjct: 202 FEASKKMKDKIGTAYYIAPEVLHGTYDEKC-------------DVWSTGVIL 240
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNT 733
A +F +G+G FG+VY ++ +A+K+L L + G E E+ +
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
RH N++++ F A L+ EY G++ L + + E + I
Sbjct: 68 RHPNILRLYGY-----FHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYI------ 116
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++A+A+ Y H ++H D+KP N+LL +++FG + S
Sbjct: 117 TELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGW----------SVHAPSS 163
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+PP I G + V D++SLGV+ E + P
Sbjct: 164 RRTTLCGTLDYLPPEMIE----------GRMHDEKV--DLWSLGVLCYEFLVGKPP 207
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 100/252 (39%), Gaps = 43/252 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA-LKSFVAECEVLRNTRHRNLI 739
F +G G+FG V+ +G +K +N + ++ AE EVL++ H N+I
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNII 83
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
KI V F+ +V E + G L E + + + + + L M +A
Sbjct: 84 KIFEV-----FEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL--MKQMMNA 136
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH----VSDFGLARFLFARPFDTSMETQSSS 855
+ Y H +VH DLKP N+L D H + DFGLA ++ S
Sbjct: 137 LAYFHSQH---VVHKDLKPENILF-QDTSPHSPIKIIDFGLAELF---------KSDEHS 183
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
GT Y+ P + + C D++S GV++ + T C+
Sbjct: 184 TNAAGTALYMAPEVFKRDVTFKC-------------DIWSAGVVMYFLL-----TGCLPF 225
Query: 916 GGLTLHEFCKMA 927
G +L E + A
Sbjct: 226 TGTSLEEVQQKA 237
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 52 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 105
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426
NQ+T P + L NL + LSSN + S+L LT + L S
Sbjct: 106 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFS 159
Query: 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKL--------------IGAVPQQILTITTLSRFL 472
SN + P L N L L++S NK+ + A QI IT L
Sbjct: 160 SNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 217
Query: 473 DLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529
+L LNG+ ++G +L NL L ++ NQ S P L+G T L + N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 530 SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 276 ISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 322
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 93 YVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFV 152
Y+ NL+ IN + N P + L +L +++ NN + P L++ +NL
Sbjct: 61 YLNNLT---QINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 113
Query: 153 AYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPP 212
+ NN + +I D + L + L+ N ++ + S G S+ L NQ + P
Sbjct: 114 LF-NNQITDI--DPLKNLTNLNRLELSSNTISDISALS-GLTSLQQLSFSSNQVTDLKP- 168
Query: 213 SLYNMSSLENILLDVNGFTGNLPLDIGV--TLPNLQVFAIGDNYFSGSIPESFSNASNIE 270
L N+++LE + + N + DI V L NL+ +N S P +N++
Sbjct: 169 -LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITPLGI--LTNLD 220
Query: 271 IIDLPINYFTGKVSIIFGRLKNLWSLDLG---INNLG--SG---------GANDLDFVTI 316
+L +N K L NL LDL I+NL SG GAN + ++
Sbjct: 221 --ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 278
Query: 317 LTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP 363
L + L L EN+L + P I+NL +T + + N IS P
Sbjct: 279 LAGLTALTNLELNENQLEDISP--ISNLK-NLTYLTLYFNNISDISP 322
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 52 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 105
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426
NQ+T P + L NL + LSSN + S+L LT + L S
Sbjct: 106 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFS 159
Query: 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKL--------------IGAVPQQILTITTLSRFL 472
SN + P L N L L++S NK+ + A QI IT L
Sbjct: 160 SNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 217
Query: 473 DLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529
+L LNG+ ++G +L NL L ++ NQ S P L+G T L + N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 530 SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 276 ISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 322
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 41/287 (14%)
Query: 93 YVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFV 152
Y+ NL+ IN + N P + L +L +++ NN + P L++ +NL
Sbjct: 61 YLNNLT---QINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 113
Query: 153 AYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPP 212
+ NN + +I D + L + L+ N ++ + S G S+ L NQ + P
Sbjct: 114 LF-NNQITDI--DPLKNLTNLNRLELSSNTISDISALS-GLTSLQQLSFSSNQVTDLKP- 168
Query: 213 SLYNMSSLENILLDVNGFTGNLPLDIGV--TLPNLQVFAIGDNYFSGSIPESFSNASNIE 270
L N+++LE + + N + DI V L NL+ +N S P +N++
Sbjct: 169 -LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITPLGI--LTNLD 220
Query: 271 IIDLPINYFTGKVSIIFGRLKNLWSLDLG---INNLG--SG---------GANDLDFVTI 316
+L +N K L NL LDL I+NL SG GAN + ++
Sbjct: 221 --ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 278
Query: 317 LTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP 363
L + L L EN+L + P I+NL +T + + N IS P
Sbjct: 279 LAGLTALTNLELNENQLEDISP--ISNLK-NLTYLTLYFNNISDISP 322
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 115/251 (45%), Gaps = 35/251 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVK-ILNLMQKG--ALKSFVAECEVLRNTRHRNLIKIIT 743
+G+G++G V+K I G VAVK I + Q A ++F + + H N++ ++
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
V + + + LV++YM+ L + + +P + + + + I+YL
Sbjct: 77 VLRADNDRDV---YLVFDYMET-DLHAVIRANILEP-------VHKQYVVYQLIKVIKYL 125
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR-FLFAR------PFDTSMETQSSSI 856
H ++H D+KPSN+LL+ + V+DFGL+R F+ R P + T++
Sbjct: 126 H---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDD 182
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG-DVYSLGVMLLEMFTRRRPTNCMFQ 915
YV + P E +GS G D++SLG +L E+ + +F
Sbjct: 183 DQPILTDYVA----TRWYRAP--EILLGSTKYTKGIDMWSLGCILGEILCGK----PIFP 232
Query: 916 GGLTLHEFCKM 926
G T+++ ++
Sbjct: 233 GSSTMNQLERI 243
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 40/243 (16%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH-- 735
++F ++GQG+FG V K + + A+K + ++ L + ++E +L + H
Sbjct: 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQY 63
Query: 736 -----------RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784
RN +K +T K F + EY +N +L + +H N + +
Sbjct: 64 VVRYYAAWLERRNFVKPMTAVKK---KSTLFIQM--EYCENRTLYDLIHSENLNQQRDEY 118
Query: 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARP 844
+ R + A+ Y+H I+H DLKP N+ +D + DFGLA+ + R
Sbjct: 119 WRLFR-----QILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVH-RS 169
Query: 845 FDT-SMETQS---SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
D +++Q+ SS + +G A + L+ G G + D+YSLG++
Sbjct: 170 LDILKLDSQNLPGSSDNLTSAIG------TAMYVATEVLD-GTG-HYNEKIDMYSLGIIF 221
Query: 901 LEM 903
EM
Sbjct: 222 FEM 224
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+ +G+G+FGSV Y + G VAVK L + F E ++L+ ++K
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
V G LV EY+ +G L ++L + + + L L + +
Sbjct: 76 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----QICKGM 127
Query: 801 EYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
EYL C VH DL N+L++ + ++DFGLA+ L P D G
Sbjct: 128 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP-GQS 179
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P L + S S DV+S GV+L E+FT
Sbjct: 180 PIFWYAPES----------LSDNIFSRQS---DVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+ +G+G+FGSV Y + G VAVK L + F E ++L+ ++K
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
V G LV EY+ +G L ++L + + + L L + +
Sbjct: 77 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----QICKGM 128
Query: 801 EYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
EYL C VH DL N+L++ + ++DFGLA+ L P D G
Sbjct: 129 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP-GQS 180
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P L + S S DV+S GV+L E+FT
Sbjct: 181 PIFWYAPES----------LSDNIFSRQS---DVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Composition-based stats.
Identities = 61/226 (26%), Positives = 92/226 (40%), Gaps = 34/226 (15%)
Query: 685 NMIGQGSFGSV----YKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+ +G+G+FGSV Y + G VAVK L + F E ++L+ ++K
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
V G LV EY+ +G L ++L + + + L L + +
Sbjct: 89 YRGVSYG---PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSS-----QICKGM 140
Query: 801 EYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
EYL C VH DL N+L++ + ++DFGLA+ L P D G
Sbjct: 141 EYLGSRRC----VHRDLAARNILVESEAHVKIADFGLAKLL---PLDKDYYVVREP-GQS 192
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P L + S S DV+S GV+L E+FT
Sbjct: 193 PIFWYAPES----------LSDNIFSRQS---DVWSFGVVLYELFT 225
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/291 (29%), Positives = 123/291 (42%), Gaps = 37/291 (12%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 52 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 105
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426
NQ+T P + L NL + LSSN + S+L LT + L S
Sbjct: 106 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNFS 159
Query: 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKL--------------IGAVPQQILTITTLSRFL 472
SN + P L N L L++S NK+ + A QI IT L
Sbjct: 160 SNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 217
Query: 473 DLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529
+L LNG+ ++G +L NL L ++ NQ S P L+G T L + N
Sbjct: 218 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 275
Query: 530 SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 276 ISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 322
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 124/287 (43%), Gaps = 41/287 (14%)
Query: 93 YVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFV 152
Y+ NL+ IN + N P + L +L +++ NN + P L++ +NL
Sbjct: 61 YLNNLT---QINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 113
Query: 153 AYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPP 212
+ NN + +I D + L + L+ N ++ + S G S+ L+ NQ + P
Sbjct: 114 LF-NNQITDI--DPLKNLTNLNRLELSSNTISDISALS-GLTSLQQLNFSSNQVTDLKP- 168
Query: 213 SLYNMSSLENILLDVNGFTGNLPLDIGV--TLPNLQVFAIGDNYFSGSIPESFSNASNIE 270
L N+++LE + + N + DI V L NL+ +N S P +N++
Sbjct: 169 -LANLTTLERLDISSNKVS-----DISVLAKLTNLESLIATNNQISDITPLGI--LTNLD 220
Query: 271 IIDLPINYFTGKVSIIFGRLKNLWSLDLG---INNLG--SG---------GANDLDFVTI 316
+L +N K L NL LDL I+NL SG GAN + ++
Sbjct: 221 --ELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP 278
Query: 317 LTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP 363
L + L L EN+L + P I+NL +T + + N IS P
Sbjct: 279 LAGLTALTNLELNENQLEDISP--ISNLK-NLTYLTLYFNNISDISP 322
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 21/166 (12%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+F +G GSFG V+ NG + A+K+L K V + + +T L+
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-------KEIVVRLKQVEHTNDERLM 59
Query: 740 KIITVCSSI-----DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
I I F+ A ++ +Y++ G L L +S P + + + A
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFP-----NPVAKF-YAA 113
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
++ A+EYLH I++ DLKP N+LLD + ++DFG A+++
Sbjct: 114 EVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYV 156
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 105/237 (44%), Gaps = 25/237 (10%)
Query: 669 VSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECE 728
+ S L + F ++G G++G VYKG + G A+K++++ + E
Sbjct: 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE-EEIKQEIN 72
Query: 729 VLRN-TRHRNLIKIITVCSSIDFKGADFK-ALVYEYMQNGSLEEWLHQSNGQPEVCDLSL 786
+L+ + HRN+ + G D + LV E+ GS+ + + + G L
Sbjct: 73 MLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNT----LKE 128
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
I ++ + +LH H ++H D+K NVLL + + DFG++ L D
Sbjct: 129 EWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQL-----D 180
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
++ +++ I GT ++ P IA N P Y S D++SLG+ +EM
Sbjct: 181 RTVGRRNTFI---GTPYWMAPEVIACDEN-PDATYDFKS------DLWSLGITAIEM 227
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 102/242 (42%), Gaps = 48/242 (19%)
Query: 663 EQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA-LK 721
+ Y ++ Y EL E IG G F V G VA+KI++ G+ L
Sbjct: 3 KDYDELLKYYELHET---------IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLP 53
Query: 722 SFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEV 781
E E L+N RH+++ ++ V + A+ +V EY G L +++ +
Sbjct: 54 RIKTEIEALKNLRHQHICQLYHVLET-----ANKIFMVLEYCPGGELFDYIISQDR---- 104
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841
LS + + + SA+ Y+H H DLKP N+L D + DFGL
Sbjct: 105 --LSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLC---- 155
Query: 842 ARP---FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898
A+P D ++T G++ Y P I L GSEA DV+S+G+
Sbjct: 156 AKPKGNKDYHLQTCC------GSLAYAAPELIQGKSYL-------GSEA----DVWSMGI 198
Query: 899 ML 900
+L
Sbjct: 199 LL 200
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 61/240 (25%), Positives = 100/240 (41%), Gaps = 42/240 (17%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTR 734
++ + ++G+GSFG V G AVK+++ + QK +S + E ++L+
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 90
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAI 794
H N++K+ F+ + LV E G L + + EV +I+++
Sbjct: 91 HPNIMKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQV---- 141
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTSMET 851
S I Y+H + IVH DLKP N+LL+ D + DFGL+ T E
Sbjct: 142 --LSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------THFEA 187
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
GT Y+ P + + C DV+S GV+L + + P N
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGTYDEKC-------------DVWSTGVILYILLSGCPPFN 234
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 54.3 bits (129), Expect = 3e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 79 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG-----KWPV 178
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 179 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 209
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 103/232 (44%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVA--VKILNLMQK---GALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V V I+ L + A K + E V+ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 109 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 157
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 158 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 208
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 209 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 248
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 100/252 (39%), Gaps = 54/252 (21%)
Query: 665 YFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV 724
YF + EL F+ IG+GSFG V+KGI VA+KI++L +
Sbjct: 19 YFQSMDPEEL------FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA------- 65
Query: 725 AECEVLRNTRHRNLIKIITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNG 777
+ I +++ C S + G+ K ++ EY+ GS + L
Sbjct: 66 ----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL----- 116
Query: 778 QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
E L Q I ++ ++YLH + +H D+K +NVLL ++DFG+A
Sbjct: 117 --EPGPLDETQIATILREILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVA 171
Query: 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897
L +TQ GT ++ P I + S D++SLG
Sbjct: 172 GQL--------TDTQIKRNTFVGTPFWMAPEVIKQ------------SAYDSKADIWSLG 211
Query: 898 VMLLEMFTRRRP 909
+ +E+ P
Sbjct: 212 ITAIELARGEPP 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILN---LMQKGALKSFVAECEVLR 731
++ + ++G+GSFG V IL ++ G AVK+++ + QK +S + E ++L+
Sbjct: 25 SDRYKGQRVLGKGSFGEV---ILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLK 81
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N+ K+ F+ + LV E G L + + EV +I++
Sbjct: 82 QLDHPNIXKLYEF-----FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQ-- 134
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTS 848
+ S I Y H + IVH DLKP N+LL+ D + DFGL+ T
Sbjct: 135 ----VLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS---------TH 178
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
E GT Y+ P + + C DV+S GV+L
Sbjct: 179 FEASKKXKDKIGTAYYIAPEVLHGTYDEKC-------------DVWSTGVIL 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 61/267 (22%)
Query: 669 VSYSELSEATN-EFSSSNM-----IGQGSFGSVYKGILGE----------NGTFVAVKIL 712
VS EL E EF + +G+G+FG V ++ E VAVK+L
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKML 75
Query: 713 -NLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEE 770
+ + L V+E E+++ +H+N+I ++ C+ G + ++ EY G+L E
Sbjct: 76 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKGNLRE 130
Query: 771 WL-----------HQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKP 818
+L + N PE ++ ++ +A +EYL C +H DL
Sbjct: 131 YLRARRPPGMEXSYDINRVPEE-QMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAA 185
Query: 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPC 878
NVL+ + V ++DFGLAR + D +T + + +K ++ P + +
Sbjct: 186 RNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVK----WMAPEALFDRV---- 235
Query: 879 LEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ DV+S GV++ E+FT
Sbjct: 236 --------YTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 116/267 (43%), Gaps = 61/267 (22%)
Query: 669 VSYSELSEATN-EFSSSNM-----IGQGSFGSVYKGILGE----------NGTFVAVKIL 712
VS EL E EF + +G+G+FG V ++ E VAVK+L
Sbjct: 19 VSEYELPEDPKWEFPRDKLTLGKPLGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKML 75
Query: 713 -NLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEE 770
+ + L V+E E+++ +H+N+I ++ C+ G + ++ EY G+L E
Sbjct: 76 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKGNLRE 130
Query: 771 WL-----------HQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKP 818
+L + N PE ++ ++ +A +EYL C +H DL
Sbjct: 131 YLRARRPPGMEYSYDINRVPEE-QMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAA 185
Query: 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPC 878
NVL+ + V ++DFGLAR + D +T + + +K ++ P + +
Sbjct: 186 RNVLVTENNVMKIADFGLARDI--NNIDXXKKTTNGRLPVK----WMAPEALFDRV---- 235
Query: 879 LEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ DV+S GV++ E+FT
Sbjct: 236 --------YTHQSDVWSFGVLMWEIFT 254
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 70/244 (28%), Positives = 110/244 (45%), Gaps = 30/244 (12%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECE 728
+ +S +S IG G V++ +L E A+K +NL + L S+ E
Sbjct: 20 FQSMSVKGRIYSILKQIGSGGSSKVFQ-VLNEKKQIYAIKYVNLEEADNQTLDSYRNEIA 78
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGS--LEEWLHQSNGQPEVCDLSL 786
L N ++ KII + D++ D +Y M+ G+ L WL + +
Sbjct: 79 YL-NKLQQHSDKIIRL---YDYEITD--QYIYMVMECGNIDLNSWLKKKK------SIDP 126
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+R + +M A+ +H H IVH DLKP+N L+ M+ + DFG+A + +P D
Sbjct: 127 WERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVDGMLKLI-DFGIANQM--QP-D 179
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYG-MGSEASVTGDVYSLGVMLLEMFT 905
+ S + GTV Y+PP I M + E G S+ S DV+SLG +L M
Sbjct: 180 XXXVVKDSQV---GTVNYMPPEAIKDMSS--SRENGKSKSKISPKSDVWSLGCILYYMTY 234
Query: 906 RRRP 909
+ P
Sbjct: 235 GKTP 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 49/238 (20%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F+ + IG+GSFG VYKGI VA+KI++L + + I
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEI-----------EDIQQEIT 69
Query: 741 IITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+++ C S + G+ K+ ++ EY+ GS + L G E ++ I R
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKP--GPLEETYIATILR---- 123
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ ++YLH + +H D+K +NVLL ++DFG+A L +TQ
Sbjct: 124 -EILKGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--------TDTQI 171
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
GT ++ P I + S D++SLG+ +E+ + P N
Sbjct: 172 KRNXFVGTPFWMAPEVIKQ------------SAYDFKADIWSLGITAIEL-AKGEPPN 216
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITV 744
IG+G+F V G VAVKI++ Q +L+ E + + H N++K+ V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ LV EY G + ++L E + +++ SA++Y H
Sbjct: 82 IET-----EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQI------VSAVQYCH 130
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA-RFLFARPFD 846
Q IVH DLK N+LLD D ++DFG + F F D
Sbjct: 131 ---QKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLD 170
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 687 IGQGSFGSVYKGILGENGTF-------VAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+GQG+F ++KG+ E G + V +K+L+ + +SF ++ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
VC D LV E+++ GSL+ +L ++ C ++++ +L +A +A+A
Sbjct: 76 LNYGVCVC-----GDENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAAA 125
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+ +L + ++HG++ N+LL + G F+ S+ I ++
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDI-LQ 178
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ +VPP I NL ++ D +S G L E+
Sbjct: 179 ERIPWVPPECIENPKNL-----------NLATDKWSFGTTLWEI 211
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALKS-FVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 377 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 436
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ + ++ ++Y
Sbjct: 437 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIE---LVHQVSMGMKY 484
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 485 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 536
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 537 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 567
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 13 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 72
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 73 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 120
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 121 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 172
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 173 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 203
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 669 VSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAE 726
VS + + + + + +G+G++G VYK I VA+K + L ++G + + E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 727 CEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSL 786
+L+ +HRN+I++ +V L++EY +N L++++ ++ D+S+
Sbjct: 84 VSLLKELQHRNIIELKSVIHH-----NHRLHLIFEYAEN-DLKKYMDKN------PDVSM 131
Query: 787 IQRLNIAIDMASAIEYLH-HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
+ + + + + H C +H DLKP N+LL + + F AR F
Sbjct: 132 RVIKSFLYQLINGVNFCHSRRC----LHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMF 904
+ + I T+ Y PP E +GS S + D++S+ + EM
Sbjct: 188 GIPIRQFTHEI---ITLWYRPP------------EILLGSRHYSTSVDIWSIACIWAEML 232
Query: 905 TR 906
+
Sbjct: 233 MK 234
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 25 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 84
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 85 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 132
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 133 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 184
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 185 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 19 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 78
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 79 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 127 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 178
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 179 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 209
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 95 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 142
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 195 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 35 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 94
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 95 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 142
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 143 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 194
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 195 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 225
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 33 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 92
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 93 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 140
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 141 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 192
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 193 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 223
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 53.5 bits (127), Expect = 5e-07, Method: Composition-based stats.
Identities = 66/223 (29%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALK-SFVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ ++ ++ ++Y
Sbjct: 75 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIELVH---QVSMGMKY 122
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 123 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 174
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 175 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 205
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 104/223 (46%), Gaps = 36/223 (16%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKIL-NLMQKGALKS-FVAECEVLRNTRHRNLIKII 742
+G G+FG+V KG + + VAVKIL N ALK +AE V++ + ++++I
Sbjct: 378 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 437
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
+C A+ LV E + G L ++L Q+ V D ++I+ + ++ ++Y
Sbjct: 438 GICE------AESWMLVMEMAELGPLNKYLQQNR---HVKDKNIIE---LVHQVSMGMKY 485
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L + VH DL NVLL A +SDFGL++ L A +T K V
Sbjct: 486 LE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG-----KWPV 537
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ P C+ Y S S DV+S GV++ E F+
Sbjct: 538 KWYAP---------ECINYYKFSSKS---DVWSFGVLMWEAFS 568
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 112/267 (41%), Gaps = 61/267 (22%)
Query: 669 VSYSELSEATN-EFSSSNM-----IGQGSFGSVYKGILGE----------NGTFVAVKIL 712
VS EL E EF + +G+G FG V ++ E VAVK+L
Sbjct: 65 VSEYELPEDPKWEFPRDKLTLGKPLGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKML 121
Query: 713 -NLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEE 770
+ + L V+E E+++ +H+N+I ++ C+ G + ++ EY G+L E
Sbjct: 122 KDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ---DGPLY--VIVEYASKGNLRE 176
Query: 771 WL-----------HQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKP 818
+L + N PE ++ ++ +A +EYL C +H DL
Sbjct: 177 YLRARRPPGMEYSYDINRVPEE-QMTFKDLVSCTYQLARGMEYLASQKC----IHRDLAA 231
Query: 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPC 878
NVL+ + V ++DFGLAR + + K T G +P +A
Sbjct: 232 RNVLVTENNVMKIADFGLAR-----------DINNIDYYKKTTNGRLPVKWMAP------ 274
Query: 879 LEYGMGSEASVTGDVYSLGVMLLEMFT 905
E + DV+S GV++ E+FT
Sbjct: 275 -EALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 79 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 127
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 128 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 178
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 218
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 102/224 (45%), Gaps = 35/224 (15%)
Query: 687 IGQGSFGSVYKGILGENGTF-------VAVKILNLMQKGALKSFVAECEVLRNTRHRNLI 739
+GQG+F ++KG+ E G + V +K+L+ + +SF ++ H++L+
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
VC F G D LV E+++ GSL+ +L ++ C ++++ +L +A +A A
Sbjct: 76 LNYGVC----FCG-DENILVQEFVKFGSLDTYLKKNKN----C-INILWKLEVAKQLAWA 125
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
+ +L + ++HG++ N+LL + G F+ S+ I ++
Sbjct: 126 MHFLEENT---LIHGNVCAKNILL---IREEDRKTGNPPFIKLSDPGISITVLPKDI-LQ 178
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ +VPP I NL ++ D +S G L E+
Sbjct: 179 ERIPWVPPECIENPKNL-----------NLATDKWSFGTTLWEI 211
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 73/158 (46%), Gaps = 35/158 (22%)
Query: 759 VYEYMQ-----NGSLEEWLHQ----SNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809
VY Y+Q +L++W+++ + + VC L+I I +A A+E+LH
Sbjct: 134 VYLYIQMQLCRKENLKDWMNRRCSLEDREHGVC-------LHIFIQIAEAVEFLHSKG-- 184
Query: 810 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD----TSMETQSSSIGIKGTVGYV 865
++H DLKPSN+ D V V DFGL + + T M ++ G GT Y+
Sbjct: 185 -LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYM 243
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P I G+ S D++SLG++L E+
Sbjct: 244 SPEQIH------------GNNYSHKVDIFSLGLILFEL 269
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 52.8 bits (125), Expect = 9e-07, Method: Composition-based stats.
Identities = 64/252 (25%), Positives = 112/252 (44%), Gaps = 44/252 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G+G + V++ I N V VKIL ++K +K E ++L N R IIT+
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR---EIKILENLRGGP--NIITLAD 99
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
+ + ALV+E++ N ++ L+Q+ ++ R + ++ A++Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTDYDI-------RFYM-YEILKALDYCHSM 150
Query: 807 CQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYV 865
I+H D+KP NV++DH+ + D+GLA F + +S KG
Sbjct: 151 ---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRYFKGP---- 200
Query: 866 PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCK 925
+++ +Y + D++SLG ML M R+ P F G + +
Sbjct: 201 -----ELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGHDNYDQLVR 244
Query: 926 MALPEKVMETVD 937
+A KV+ T D
Sbjct: 245 IA---KVLGTED 253
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 125
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 177 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 216
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 126
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 178 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 217
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 130
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 181
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 221
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA+KI++ +K A+ S E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 77 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 125
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 126 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 177 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 216
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 85 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 133
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 134 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 185 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 224
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA+KI++ +K A+ S E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA+KI++ +K A+ S E E+
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 74
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 75 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 128
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 129 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 173
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 100 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 148
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 149 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 199
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 200 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 94/240 (39%), Gaps = 48/240 (20%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F+ IG+GSFG V+KGI VA+KI++L + I
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLE-----------EAEDEIEDIQQEIT 73
Query: 741 IITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+++ C S + G+ K ++ EY+ GS + L Q +
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-------AGPFDEFQIATML 126
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ ++YLH + +H D+K +NVLL ++DFG+A L +TQ
Sbjct: 127 KEILKGLDYLHSEKK---IHRDIKAANVLLSEQGDVKLADFGVAGQL--------TDTQI 175
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
GT ++ P I + S D++SLG+ +E+ P + M
Sbjct: 176 KRNTFVGTPFWMAPEVIQQ------------SAYDSKADIWSLGITAIELAKGEPPNSDM 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA+KI++ +K A+ S E E+
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 67
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 68 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 121
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 122 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 166
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 81 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 129
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 130 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 180
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 181 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 220
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 78 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 126
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 127 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 178 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 217
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 100/232 (43%), Gaps = 34/232 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNT 733
++ ++ IG+GSFG E+G +K +N+ M + E VL N
Sbjct: 21 QSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM 80
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N I+ S + G+ + +V +Y + G L + N Q V Q L+
Sbjct: 81 KHPN---IVQYRESFEENGSLY--IVMDYCEGGDL---FKRINAQKGVL-FQEDQILDWF 131
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ + A++++H I+H D+K N+ L D + DFG+AR L ++++E
Sbjct: 132 VQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVL-----NSTVELAR 183
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ I GT Y+ P E + D+++LG +L E+ T
Sbjct: 184 ACI---GTPYYLSP------------EICENKPYNNKSDIWALGCVLYELCT 220
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 95/233 (40%), Gaps = 45/233 (19%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRH 735
++F +G+G FG+VY ++ VA+K+L + ++G E E+ + H
Sbjct: 23 DDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHH 82
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ F L+ EY G L + L +S C + I +
Sbjct: 83 PNILRLYNY-----FYDRRRIYLILEYAPRGELYKELQKS------CTFDEQRTATIMEE 131
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+A A+ Y H ++H D+KP N+LL ++DFG + + S
Sbjct: 132 LADALMYCH---GKKVIHRDIKPENLLLGLKGELKIADFGWS-------------VHAPS 175
Query: 856 IGIK---GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ K GT+ Y+PP I G + D++ +GV+ E+
Sbjct: 176 LRRKTMCGTLDYLPPEMIE------------GRMHNEKVDLWCIGVLCYELLV 216
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+L+ V DFG+AR + S + + + GT Y+ P
Sbjct: 144 PANILISATNAVKVVDFGIARAI-----ADSGNSVXQTAAVIGTAQYLSP---------- 188
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 189 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+++ V DFG+AR + S + + + + GT Y+ P
Sbjct: 144 PANIMISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSP---------- 188
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 189 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+++ V DFG+AR + S + + + + GT Y+ P
Sbjct: 144 PANIMISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSP---------- 188
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 189 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+++ V DFG+AR + S + + + + GT Y+ P
Sbjct: 144 PANIMISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSP---------- 188
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 189 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 110 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 160
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+++ V DFG+AR + S + + + + GT Y+ P
Sbjct: 161 PANIMISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSP---------- 205
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 206 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 52.4 bits (124), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 65/152 (42%), Gaps = 26/152 (17%)
Query: 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817
+V EY+ +L + +H ++ + + + D A+ + H Q I+H D+K
Sbjct: 93 IVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSH---QNGIIHRDVK 143
Query: 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLP 877
P+N+++ V DFG+AR + S + + + + GT Y+ P
Sbjct: 144 PANIMISATNAVKVMDFGIARAI-----ADSGNSVTQTAAVIGTAQYLSP---------- 188
Query: 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
E G DVYSLG +L E+ T P
Sbjct: 189 --EQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 38/253 (15%)
Query: 661 PMEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ 716
PM Q P EL+ E + + + +G G++GSV + G VAVK L+
Sbjct: 2 PMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 61
Query: 717 KGAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ 774
+ + K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 62 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 121
Query: 775 SNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DF
Sbjct: 122 QKLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDF 171
Query: 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894
GLAR T G T Y P MLN + Y T D++
Sbjct: 172 GLAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIW 209
Query: 895 SLGVMLLEMFTRR 907
S+G ++ E+ T R
Sbjct: 210 SVGCIMAELLTGR 222
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 32/158 (20%)
Query: 758 LVYEYMQNGSL---EEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHG 814
++YEYM+N S+ +E+ + + C + + I + ++ Y+H+ + I H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLD-KNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHR 176
Query: 815 DLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKML 874
D+KPSN+L+D + +SDFG + ++ + G +GT ++PP
Sbjct: 177 DVKPSNILMDKNGRVKLSDFGESEYMVDKKIK----------GSRGTYEFMPPE------ 220
Query: 875 NLPCLEYGMGSEASVTG---DVYSLGVMLLEMFTRRRP 909
+E+S G D++SLG+ L MF P
Sbjct: 221 -------FFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 48/230 (20%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F+ IG+GSFG V+KGI VA+KI++L + + I
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-----------EDIQQEIT 72
Query: 741 IITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+++ C S + G+ K ++ EY+ GS + L E L Q I
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 125
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ ++YLH + +H D+K +NVLL ++DFG+A L +TQ
Sbjct: 126 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--------TDTQI 174
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT ++ P I + S D++SLG+ +E+
Sbjct: 175 KRNXFVGTPFWMAPEVIKQ------------SAYDSKADIWSLGITAIEL 212
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 48/230 (20%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F+ IG+GSFG V+KGI VA+KI++L + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-----------EDIQQEIT 57
Query: 741 IITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+++ C S + G+ K ++ EY+ GS + L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ ++YLH + +H D+K +NVLL ++DFG+A L +TQ
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--------TDTQI 159
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT ++ P I + S D++SLG+ +E+
Sbjct: 160 KRNTFVGTPFWMAPEVIKQ------------SAYDSKADIWSLGITAIEL 197
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 48/230 (20%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
F+ IG+GSFG V+KGI VA+KI++L + + I
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEI-----------EDIQQEIT 57
Query: 741 IITVCSS---IDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+++ C S + G+ K ++ EY+ GS + L E L Q I
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-------EPGPLDETQIATIL 110
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ ++YLH + +H D+K +NVLL ++DFG+A L +TQ
Sbjct: 111 REILKGLDYLHSEKK---IHRDIKAANVLLSEHGEVKLADFGVAGQL--------TDTQI 159
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT ++ P I + S D++SLG+ +E+
Sbjct: 160 KRNXFVGTPFWMAPEVIKQ------------SAYDSKADIWSLGITAIEL 197
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 107/256 (41%), Gaps = 45/256 (17%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + S +G G++GSV I +G VA+K L+ + + K E +L++
Sbjct: 39 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 98
Query: 734 RHRN---LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+H N L+ + T SS+ DF LV +MQ L + G + S +
Sbjct: 99 QHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQTD-----LQKIMG----MEFSEEKIQ 147
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+ M ++Y+H +VH DLKP N+ ++ D + DFGLAR
Sbjct: 148 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----------H 193
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ G T Y P I L + Y T D++S+G ++ EM T +
Sbjct: 194 ADAEMTGYVVTRWYRAPEVI-----LSWMHYNQ------TVDIWSVGCIMAEMLTGK--- 239
Query: 911 NCMFQGGLTLHEFCKM 926
+F+G L + ++
Sbjct: 240 -TLFKGKDYLDQLTQI 254
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
+F M+G+GSFG V+ + F A+K L ++ ++ + E VL
Sbjct: 18 EDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 77
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C+ F+ + V EY+ G L + + L + A +
Sbjct: 78 HPFLTHM-FCT---FQTKENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAE 127
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ +++LH IV+ DLK N+LLD D ++DFG+ + +M + +
Sbjct: 128 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--------ENMLGDAKT 176
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P E +G + + + D +S GV+L EM + P
Sbjct: 177 NEFCGTPDYIAP------------EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 218
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 32/248 (12%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAE-CEVLRNTRHRNLIKIIT 743
++ +G F VY+ +G A+K L ++ ++ + E C + + + H N+++ +
Sbjct: 34 RVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS 93
Query: 744 VCS----SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-PEVCDLSLIQRLNIAIDMAS 798
S D A+F L+ + G L E+L + + P CD L I
Sbjct: 94 AASIGKEESDTGQAEF--LLLTELCKGQLVEFLKKMESRGPLSCDTVL----KIFYQTCR 147
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS--- 855
A++++H +PPI+H DLK N+LL + + DFG A + P D S Q +
Sbjct: 148 AVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYP-DYSWSAQRRALVE 205
Query: 856 --IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
I T Y P I N P E D+++LG +L + R+ P
Sbjct: 206 EEITRNTTPMYRTPEIIDLYSNFPIGE---------KQDIWALGCILYLLCFRQHP---- 252
Query: 914 FQGGLTLH 921
F+ G L
Sbjct: 253 FEDGAKLR 260
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 111/260 (42%), Gaps = 33/260 (12%)
Query: 656 SSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGIL-GENGTFVAVKILNL 714
S+ S P + + E + +IG+G FG VY G GE VA++++++
Sbjct: 10 SARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWHGE----VAIRLIDI 65
Query: 715 MQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL 772
+ + LK+F E R TRH N++ + C S A++ + +L +
Sbjct: 66 ERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS-----PPHLAIITSLCKGRTLYSVV 120
Query: 773 HQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832
+ L + + IA ++ + YLH I+H DLK NV D+ V ++
Sbjct: 121 RDAK-----IVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNGKVV-IT 171
Query: 833 DFGL---ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV 889
DFGL + L A + + Q+ G + ++ P I + L+ E + S
Sbjct: 172 DFGLFSISGVLQAGRREDKLRIQN------GWLCHLAP-EIIRQLSPDTEEDKL--PFSK 222
Query: 890 TGDVYSLGVMLLEMFTRRRP 909
DV++LG + E+ R P
Sbjct: 223 HSDVFALGTIWYELHAREWP 242
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 100 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 47/223 (21%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK-----SFVAECEVLRNTRHRNLIK 740
M+G+GSFG V K AVK++N K + K + + E E+L+ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + + F +V E G L + + + E +I+++ S I
Sbjct: 86 LFEILED----SSSF-YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV------FSGI 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
Y+H H IVH DLKP N+LL + D + DFGL+ T + +
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKD 182
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
GT Y+ P + + C DV+S GV+L
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKC-------------DVWSAGVIL 212
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 56/241 (23%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA---LKSFVAECEVLRNTRHRN 737
FS IG GSFG+VY N VA+K ++ K + + + E L+ RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 738 LIKIITVCSSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+I ++G + LV EY + + L + + +P +Q + IA
Sbjct: 116 ---------TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKP-------LQEVEIA 157
Query: 794 IDMASAIE---YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
A++ YLH H ++H D+K N+LL + + DFG A +
Sbjct: 158 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM---------- 204
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG--DVYSLGVMLLEMFTRRR 908
+ + GT ++ P I M E G DV+SLG+ +E+ R+
Sbjct: 205 --APANXFVGTPYWMAPEVILAM-----------DEGQYDGKVDVWSLGITCIELAERKP 251
Query: 909 P 909
P
Sbjct: 252 P 252
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIIT 743
+G G+FGSV +G+ + + VA+K+L +K + + E +++ + ++++I
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC A+ LV E G L ++L G+ E +S + L + M ++YL
Sbjct: 78 VCQ------AEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMG--MKYL 126
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH DL NVLL + A +SDFGL++ L A D S T S+ G
Sbjct: 127 E---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYTARSA-GKWPLKW 179
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P C+ + S S DV+S GV + E +
Sbjct: 180 YAP----------ECINFRKFSSRS---DVWSYGVTMWEALS 208
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 98/241 (40%), Gaps = 56/241 (23%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA---LKSFVAECEVLRNTRHRN 737
FS IG GSFG+VY N VA+K ++ K + + + E L+ RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 738 LIKIITVCSSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+I ++G + LV EY + + L + + +P +Q + IA
Sbjct: 77 ---------TIQYRGCYLREHTAWLVMEYCLGSASD--LLEVHKKP-------LQEVEIA 118
Query: 794 IDMASAIE---YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
A++ YLH H ++H D+K N+LL + + DFG A +
Sbjct: 119 AVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIM---------- 165
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG--DVYSLGVMLLEMFTRRR 908
+ + GT ++ P I M E G DV+SLG+ +E+ R+
Sbjct: 166 --APANXFVGTPYWMAPEVILAM-----------DEGQYDGKVDVWSLGITCIELAERKP 212
Query: 909 P 909
P
Sbjct: 213 P 213
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 100 HKNIITLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 100 HKNIIHLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA++I++ +K A+ S E E+
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEI 207
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 208 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 261
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 262 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 306
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA++I++ +K A+ S E E+
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIIS-KRKFAIGSAREADPALNVETEIEI 193
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 194 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 247
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 248 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 100 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRH 735
++F +G+G FG+VY +N +A+K+L L ++G E E+ + RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ F L+ E+ G L + L + E + ++ L
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----- 123
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
A A+ Y H + ++H D+KP N+L+ + ++DFG
Sbjct: 124 -ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRH 735
++F +G+G FG+VY +N +A+K+L L ++G E E+ + RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ F L+ E+ G L + L + E + ++ L
Sbjct: 75 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----- 124
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
A A+ Y H + ++H D+KP N+L+ + ++DFG
Sbjct: 125 -ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN 732
E E + + +G+GSFG V++ + G AVK + L + ++ VA C L +
Sbjct: 68 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVA-CAGLSS 125
Query: 733 TRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNI 792
R I+ + ++ + + + E ++ GSL + + Q PE D +L L
Sbjct: 126 PR------IVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPE--DRALYY-LGQ 174
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMET 851
A++ +EYLH I+HGD+K NVLL D A + DFG A L
Sbjct: 175 ALE---GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL----------- 217
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Q +G G PG M E MG D++S M+L M P
Sbjct: 218 QPDGLGKSLLTGDYIPGTETHMAP----EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 273
Query: 912 CMFQGGLTL 920
F+G L L
Sbjct: 274 QYFRGPLCL 282
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 106/256 (41%), Gaps = 45/256 (17%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + S +G G++GSV I +G VA+K L+ + + K E +L++
Sbjct: 21 ELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHM 80
Query: 734 RHRN---LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
+H N L+ + T SS+ DF LV +MQ L + G S +
Sbjct: 81 QHENVIGLLDVFTPASSLR-NFYDF-YLVMPFMQTD-----LQKIMG----LKFSEEKIQ 129
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+ M ++Y+H +VH DLKP N+ ++ D + DFGLAR
Sbjct: 130 YLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR-----------H 175
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910
+ G T Y P I L + Y T D++S+G ++ EM T +
Sbjct: 176 ADAEMTGYVVTRWYRAPEVI-----LSWMHYNQ------TVDIWSVGCIMAEMLTGK--- 221
Query: 911 NCMFQGGLTLHEFCKM 926
+F+G L + ++
Sbjct: 222 -TLFKGKDYLDQLTQI 236
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 100 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKNTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---------FVAECEV 729
+E+ S +G G+ G V + VA+KI++ +K A+ S E E+
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIIS-KRKFAIGSAREADPALNVETEIEI 68
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQ 788
L+ H +IKI + D+ +V E M+ G L ++ + + C L Q
Sbjct: 69 LKKLNHPCIIKIKNFFDAEDY------YIVLELMEGGELFDKVVGNKRLKEATCKLYFYQ 122
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFL 840
M A++YLH + I+H DLKP NVLL + D + ++DFG ++ L
Sbjct: 123 -------MLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 35/249 (14%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN 732
E E + + +G+GSFG V++ + G AVK + L + ++ VA C L +
Sbjct: 52 EYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVA-CAGLSS 109
Query: 733 TRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNI 792
R I+ + ++ + + + E ++ GSL + + Q PE D +L L
Sbjct: 110 PR------IVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPE--DRALYY-LGQ 158
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMET 851
A++ +EYLH I+HGD+K NVLL D A + DFG A L
Sbjct: 159 ALE---GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL----------- 201
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Q +G G PG M E MG D++S M+L M P
Sbjct: 202 QPDGLGKSLLTGDYIPGTETHMAP----EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 257
Query: 912 CMFQGGLTL 920
F+G L L
Sbjct: 258 QYFRGPLCL 266
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 121/300 (40%), Gaps = 35/300 (11%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN 732
E E + + +G+GSFG V++ + G AVK + L + ++ VA C L +
Sbjct: 66 EYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRL-EVFRVEELVA-CAGLSS 123
Query: 733 TRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNI 792
R I+ + ++ + + + E ++ GSL + + Q PE D +L L
Sbjct: 124 PR------IVPLYGAV--REGPWVNIFMELLEGGSLGQLIKQMGCLPE--DRALYY-LGQ 172
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLARFLFARPFDTSMET 851
A++ +EYLH I+HGD+K NVLL D A + DFG A L
Sbjct: 173 ALE---GLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCL----------- 215
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Q +G G PG M E MG D++S M+L M P
Sbjct: 216 QPDGLGKSLLTGDYIPGTETHMAP----EVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWT 271
Query: 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971
F+G L L + ++ + P A +G R+ V +R V +++
Sbjct: 272 QYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQE 331
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 96/234 (41%), Gaps = 36/234 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
+F M+G+GSFG V+ + F A+K L ++ ++ + E VL
Sbjct: 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE 76
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C+ F+ + V EY+ G L + + L + A +
Sbjct: 77 HPFLTHM-FCT---FQTKENLFFVMEYLNGGDLMYHIQSCHK------FDLSRATFYAAE 126
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ +++LH IV+ DLK N+LLD D ++DFG+ + +M + +
Sbjct: 127 IILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK--------ENMLGDAKT 175
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P E +G + + + D +S GV+L EM + P
Sbjct: 176 NXFCGTPDYIAP------------EILLGQKYNHSVDWWSFGVLLYEMLIGQSP 217
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL---------KSFVAECEVLR 731
+ ++G+G V + I AVKI+++ G+ ++ + E ++LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 732 NTR-HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H N+I++ ++ F LV++ M+ G L ++L E LS +
Sbjct: 79 KVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETR 127
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
I + I LH + IVH DLKP N+LLD DM ++DFG F ++
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG---------FSCQLD 175
Query: 851 TQSSSIGIKGTVGYVPPGNIAKML--NLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ GT Y+ P I + N P G G E D++S GV++ +
Sbjct: 176 PGEKLRSVCGTPSYLAPEIIECSMNDNHP----GYGKEV----DMWSTGVIMYTLLAGSP 227
Query: 909 P 909
P
Sbjct: 228 P 228
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 78/173 (45%), Gaps = 27/173 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH--- 735
++F ++GQG+FG V K + + A+K + ++ L + ++E +L + H
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEE-KLSTILSEVXLLASLNHQYV 64
Query: 736 ----------RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
RN +K T ++ K F + EY +N +L + +H N + +
Sbjct: 65 VRYYAAWLERRNFVKPXT---AVKKKSTLF--IQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
+ R + A+ Y+H I+H +LKP N+ +D + DFGLA+
Sbjct: 120 RLFR-----QILEALSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 53/223 (23%), Positives = 98/223 (43%), Gaps = 35/223 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
IG+GS G V +G VAVK+++L ++ + E ++R+ +H N++++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY- 111
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
G + L+ E++Q G+L + + Q E Q + + A+ YLH
Sbjct: 112 ---LVGEELWVLM-EFLQGGALTDIVSQVRLNEE-------QIATVCEAVLQALAYLHAQ 160
Query: 807 CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVP 866
++H D+K ++LL D +SDFG F + + + GT ++
Sbjct: 161 ---GVIHRDIKSDSILLTLDGRVKLSDFG-----FCAQISKDVPKRKXLV---GTPYWMA 209
Query: 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
P I++ L + D++SLG+M++EM P
Sbjct: 210 PEVISRSL------------YATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 30 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 86
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 87 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 140
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 141 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDI--N 195
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 196 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 239
Query: 904 FT 905
FT
Sbjct: 240 FT 241
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 35 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 91
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 92 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 145
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 146 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 200
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 201 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 244
Query: 904 FT 905
FT
Sbjct: 245 FT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 32 LGEGCFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 88
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ EY G+L E+L + N PE
Sbjct: 89 HKNIINLLGACTQ---DGPLY--VIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 142
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 143 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 197
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 198 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 241
Query: 904 FT 905
FT
Sbjct: 242 FT 243
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGXLLDYVREHKDNIGSQYL-------LNW 123
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 179
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 180 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 215
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/160 (24%), Positives = 73/160 (45%), Gaps = 17/160 (10%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL---NLMQKGALKSFVAECEVLRNTRH 735
++F +G+G FG+VY +N +A+K+L L ++G E E+ + RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ F L+ E+ G L + L + E + ++ L
Sbjct: 74 PNILRMYNY-----FHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL----- 123
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
A A+ Y H + ++H D+KP N+L+ + ++DFG
Sbjct: 124 -ADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVVAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVF 92
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 93 TP-----------------QKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+GV++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGVIMGEM 218
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 107/230 (46%), Gaps = 35/230 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V K +G +AVK I + K + + ++ T +
Sbjct: 59 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT--------VDCP 110
Query: 746 SSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
++ F GA F+ + E M + SL+++ Q + + ++ + IA+ + A+E
Sbjct: 111 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 167
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
+LH ++H D+KPSNVL++ + DFG++ +L D+ +T + G
Sbjct: 168 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYL----VDSVAKTIDA-----GC 216
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
Y+ P I LN + G SV D++SLG+ ++E+ R P +
Sbjct: 217 KPYMAPERINPELN----QKGY----SVKSDIWSLGITMIELAILRFPYD 258
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 76
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 77 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-------LNW 123
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 124 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 179
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 180 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 215
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+GV++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGVIMGEM 218
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGXLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 72
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 73 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 119
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 120 CVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 175
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 176 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 211
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 70 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 116
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 117 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 172
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 173 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 208
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 125
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 181
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 217
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 56/233 (24%), Positives = 100/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 78
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 79 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 125
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 126 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 181
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++G G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 130
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFG A+ L A E +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE------EKEY 181
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 221
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL---------KSFVAECEVLR 731
+ ++G+G V + I AVKI+++ G+ ++ + E ++LR
Sbjct: 6 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 65
Query: 732 NTR-HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H N+I++ ++ F LV++ M+ G L ++L E LS +
Sbjct: 66 KVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETR 114
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
I + I LH + IVH DLKP N+LLD DM ++DFG F ++
Sbjct: 115 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG---------FSCQLD 162
Query: 851 TQSSSIGIKGTVGYVPPGNIAKML--NLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ GT Y+ P I + N P G G E D++S GV++ +
Sbjct: 163 PGEKLREVCGTPSYLAPEIIECSMNDNHP----GYGKEV----DMWSTGVIMYTLLAGSP 214
Query: 909 P 909
P
Sbjct: 215 P 215
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 43/241 (17%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL---------KSFVAECEVLR 731
+ ++G+G V + I AVKI+++ G+ ++ + E ++LR
Sbjct: 19 YEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILR 78
Query: 732 NTR-HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
H N+I++ ++ F LV++ M+ G L ++L E LS +
Sbjct: 79 KVSGHPNIIQLKDT-----YETNTFFFLVFDLMKKGELFDYL------TEKVTLSEKETR 127
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
I + I LH + IVH DLKP N+LLD DM ++DFG F ++
Sbjct: 128 KIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFG---------FSCQLD 175
Query: 851 TQSSSIGIKGTVGYVPPGNIAKML--NLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
+ GT Y+ P I + N P G G E D++S GV++ +
Sbjct: 176 PGEKLREVCGTPSYLAPEIIECSMNDNHP----GYGKEV----DMWSTGVIMYTLLAGSP 227
Query: 909 P 909
P
Sbjct: 228 P 228
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDXTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++ G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 130
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 181
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 99/232 (42%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKIL-----NLMQKGALKSFVAECEVLRNT 733
EF ++ G+FG+VYKG+ G V + + A K + E V+ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ ++ +++ +C + + L+ + M G L +++ + ++ LN
Sbjct: 82 DNPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKD-----NIGSQYLLNWC 130
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+ +A + YL +VH DL NVL+ ++DFGLA+ L A E +
Sbjct: 131 VQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE------EKEY 181
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ G G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 182 HAEG-----GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 221
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 129/329 (39%), Gaps = 66/329 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK------SFVAECEVLR 731
++ + +G G++G V +L ++ A + + +++K ++ + + E VL+
Sbjct: 3 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 59
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N++K+ F+ LV E + G L + + EV D ++I +
Sbjct: 60 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMK-- 111
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGL-ARFLFARPFDT 847
+ S YLH H IVH DLKP N+LL+ D + + DFGL A F
Sbjct: 112 ---QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
+ GT Y+ P + K + C DV+S GV+L +
Sbjct: 166 RL----------GTAYYIAPEVLRKKYDEKC-------------DVWSCGVILYILLCGY 202
Query: 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSD-GRRRAKVEECLVTVIRIGVA 966
P GG T E K EK + DP SD ++ K+ RI
Sbjct: 203 PPF-----GGQTDQEILKRV--EKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAE 255
Query: 967 CSMESPIERMEMRDVLAKLCAARQTLVGR 995
++ P + K C+ + T VG+
Sbjct: 256 EALNHPW--------IVKFCSQKHTDVGK 276
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 85/198 (42%), Gaps = 33/198 (16%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRH 735
T+E+ IG+G+F V + + G A KI+N + A + E + R +H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ SI +G F LV++ + G L E + E IQ++ A+
Sbjct: 63 SNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV- 116
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTSMETQ 852
LH H Q +VH DLKP N+LL ++DFGLA +E Q
Sbjct: 117 -------LHCH-QMGVVHRDLKPENLLLASKCKGAAVKLADFGLA-----------IEVQ 157
Query: 853 SSS---IGIKGTVGYVPP 867
G GT GY+ P
Sbjct: 158 GDQQAWFGFAGTPGYLSP 175
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 42/309 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRN 737
+++ +IG G+ V VA+K +NL + + ++ + E + + H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE----VCDLSLIQRLNIA 793
++ T F D LV + + GS+ + + + E V D S I I
Sbjct: 70 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA--TIL 122
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ +EYLH + Q +H D+K N+LL D ++DFG++ FL T + +
Sbjct: 123 REVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 179
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
+ + GT ++ P +E G + D++S G+ +E+ T
Sbjct: 180 TFV---GTPCWMAP---------EVMEQVRGYD--FKADIWSFGITAIELAT-------- 217
Query: 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI 973
G H++ M + ++ PSL D K + +I + C + P
Sbjct: 218 --GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPE 272
Query: 974 ERMEMRDVL 982
+R ++L
Sbjct: 273 KRPTAAELL 281
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 66/309 (21%), Positives = 124/309 (40%), Gaps = 42/309 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRN 737
+++ +IG G+ V VA+K +NL + + ++ + E + + H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE----VCDLSLIQRLNIA 793
++ T F D LV + + GS+ + + + E V D S I I
Sbjct: 75 IVSYYT-----SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIA--TIL 127
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ +EYLH + Q +H D+K N+LL D ++DFG++ FL T + +
Sbjct: 128 REVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRK 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
+ + GT ++ P +E G + D++S G+ +E+ T
Sbjct: 185 TFV---GTPCWMAP---------EVMEQVRGYD--FKADIWSFGITAIELAT-------- 222
Query: 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI 973
G H++ M + ++ PSL D K + +I + C + P
Sbjct: 223 --GAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISL---CLQKDPE 277
Query: 974 ERMEMRDVL 982
+R ++L
Sbjct: 278 KRPTAAELL 286
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 110/258 (42%), Gaps = 40/258 (15%)
Query: 672 SELSEATNEFSSSN---MIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECE 728
S+L E E+ + ++G+G++G VY G N +A+K + + E
Sbjct: 12 SDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIA 71
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQ 788
+ ++ +H+N+++ + F F + E + GSL L G P + I
Sbjct: 72 LHKHLKHKNIVQYLG-----SFSENGFIKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIG 125
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLFARPFDT 847
I ++YLH + IVH D+K NVL++ + V +SDFG ++ L +
Sbjct: 126 FYTKQI--LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INP 178
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
ET GT+ Y+ P I K G G A D++SLG ++EM T +
Sbjct: 179 CTET------FTGTLQYMAPEIIDKGPR------GYGKAA----DIWSLGCTIIEMATGK 222
Query: 908 -------RPTNCMFQGGL 918
P MF+ G+
Sbjct: 223 PPFYELGEPQAAMFKVGM 240
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F IG GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EYM G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 647 ARRRRSKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTF 706
+R K E + V + + V Y E E + + +G+GSFG V++ + G
Sbjct: 43 SREPSPKTEDNEGVLLTEKLKPVDY-EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQ 101
Query: 707 VAVKILNLMQKGALKSFVAE----CEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762
AVK + L + F AE C L + R I+ + ++ + + + E
Sbjct: 102 CAVKKVRL------EVFRAEELMACAGLTSPR------IVPLYGAV--REGPWVNIFMEL 147
Query: 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822
++ GSL + + + PE D +L L A++ +EYLH I+HGD+K NVL
Sbjct: 148 LEGGSLGQLVKEQGCLPE--DRALYY-LGQALE---GLEYLHSR---RILHGDVKADNVL 198
Query: 823 LDHDMV-AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEY 881
L D A + DFG A L Q +G G PG M P +
Sbjct: 199 LSSDGSHAALCDFGHAVCL-----------QPDGLGKDLLTGDYIPGTETHM--APEVVL 245
Query: 882 GMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
G +A V DV+S M+L M P F+G L L
Sbjct: 246 GRSCDAKV--DVWSSCCMMLHMLNGCHPWTQFFRGPLCL 282
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 116/279 (41%), Gaps = 44/279 (15%)
Query: 647 ARRRRSKQESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTF 706
+R K E + V + + V Y E E + + +G+GSFG V++ + G
Sbjct: 62 SREPSPKTEDNEGVLLTEKLKPVDY-EYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQ 120
Query: 707 VAVKILNLMQKGALKSFVAE----CEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762
AVK + L + F AE C L + R I+ + ++ + + + E
Sbjct: 121 CAVKKVRL------EVFRAEELMACAGLTSPR------IVPLYGAV--REGPWVNIFMEL 166
Query: 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822
++ GSL + + + PE D +L L A++ +EYLH I+HGD+K NVL
Sbjct: 167 LEGGSLGQLVKEQGCLPE--DRALYY-LGQALE---GLEYLHSR---RILHGDVKADNVL 217
Query: 823 LDHDMV-AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEY 881
L D A + DFG A L Q +G G PG M P +
Sbjct: 218 LSSDGSHAALCDFGHAVCL-----------QPDGLGKSLLTGDYIPGTETHM--APEVVL 264
Query: 882 GMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
G +A V DV+S M+L M P F+G L L
Sbjct: 265 GRSCDAKV--DVWSSCCMMLHMLNGCHPWTQFFRGPLCL 301
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F IG GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EYM G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYMPGGDMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLXGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLAGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVCHK 222
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--AMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 84/197 (42%), Gaps = 29/197 (14%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLI 739
F +G G+F V G AVK I KG S E VLR +H N++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIV 83
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ + ++ + LV + + G L + + + E +LI+++ A
Sbjct: 84 ALEDI-----YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV------LDA 132
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YLH + IVH DLKP N+L D + +SDFGL++ ME + +
Sbjct: 133 VYYLH---RMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK----------MEGKGDVM 179
Query: 857 GIK-GTVGYVPPGNIAK 872
GT GYV P +A+
Sbjct: 180 STACGTPGYVAPEVLAQ 196
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 34/222 (15%)
Query: 687 IGQGSFGSVYKGI--LGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIIT 743
+G G+FGSV +G+ + + VA+K+L +K + + E +++ + ++++I
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
VC A+ LV E G L ++L G+ E +S + L + M ++YL
Sbjct: 404 VCQ------AEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMG--MKYL 452
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+ VH +L NVLL + A +SDFGL++ L A D S T + S G
Sbjct: 453 E---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGA---DDSYYT-ARSAGKWPLKW 505
Query: 864 YVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
Y P C+ + S S DV+S GV + E +
Sbjct: 506 YAP----------ECINFRKFSSRS---DVWSYGVTMWEALS 534
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGXVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 6 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 65
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 66 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 125
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 126 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 175
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 176 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 213
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 214 VGCIMAELLTGR 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 132 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFG 181
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 182 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 219
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 220 VGCIMAELLTGR 231
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPEVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 80
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 141 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 191 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 228
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 229 VGCIMAELLTGR 240
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMAGFVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 79
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 140 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 190 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 227
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 228 VGCIMAELLTGR 239
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 677 ATNEF---SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT 733
A N F S + ++G G FG V+K G +A KI+ + E V+
Sbjct: 84 AVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL 143
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSL-IQRLNI 792
H NLI++ F+ + LV EY+ G L + + D S + L+
Sbjct: 144 DHANLIQLYDA-----FESKNDIVLVMEYVDGGELFD---------RIIDESYNLTELDT 189
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLAR 838
+ M E + H Q I+H DLKP N+L + + DFGLAR
Sbjct: 190 ILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 74 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 129
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 130 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 173 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 213 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 260
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPAIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 79
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 80 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 139
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 140 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 189
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 190 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 227
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 228 VGCIMAELLTGR 239
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/269 (23%), Positives = 114/269 (42%), Gaps = 50/269 (18%)
Query: 659 SVPMEQYFPMVSY--SELSEATNEFSSSNMIGQGSFGSVYKG-ILGENGTF----VAVKI 711
+P++++ + Y S+ + +G+G+FG V + G + T VAVK+
Sbjct: 42 ELPLDEHCERLPYDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM 101
Query: 712 LNLMQKGAL----KSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNG 766
L ++GA ++ ++E ++L + H N++ ++ C+ G +V E+ + G
Sbjct: 102 L---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK---PGGPLMVIV-EFCKFG 154
Query: 767 SLEEWLHQSNGQ-------PEVCD---LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816
+L +L + PE L+L + + +A +E+L +H DL
Sbjct: 155 NLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211
Query: 817 KPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNL 876
N+LL V + DFGLAR ++ P YV G+ L
Sbjct: 212 AARNILLSEKNVVKICDFGLARDIYKDP------------------DYVRKGDARLPLKW 253
Query: 877 PCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
E ++ DV+S GV+L E+F+
Sbjct: 254 MAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 29 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 84
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 85 ----------------FTPQKTLEEF-QDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 127
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 128 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------- 167
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 168 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + IG G++GSV + G VAVK L+ + + K E +L++
Sbjct: 24 EVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 141
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 142 -----GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------HTDD 182
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 183 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 225
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 103/248 (41%), Gaps = 62/248 (25%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV ++G +AVK L+ + + K E +L++
Sbjct: 48 EVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHM 107
Query: 734 RHRN---LIKIITVCSSID----------FKGADFKALVY-EYMQNGSLEEWLHQSNGQP 779
+H N L+ + T +S++ GAD +V + + + ++ ++Q
Sbjct: 108 KHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQ----- 162
Query: 780 EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839
+ ++Y+H I+H DLKPSN+ ++ D + DFGLAR
Sbjct: 163 ----------------ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR- 202
Query: 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
T G T Y P MLN + Y M T D++S+G +
Sbjct: 203 ----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNM------TVDIWSVGCI 241
Query: 900 LLEMFTRR 907
+ E+ T R
Sbjct: 242 MAELLTGR 249
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 123 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 172
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 173 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 210
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 211 VGCIMAELLTGR 222
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 24 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 83
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 84 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 143
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 144 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 193
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 194 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 231
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 232 VGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 133 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 183 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 220
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 221 VGCIMAELLTGR 232
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 141 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 191 LAR-----------HTDDEMXGXVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 228
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 229 VGCIMAELLTGR 240
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 72
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 133 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 183 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 220
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 221 VGCIMAELLTGR 232
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMAGFVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 108/255 (42%), Gaps = 55/255 (21%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 27 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 86
Query: 729 VLRNT-RHRNLIKIITVCSS----------------IDFKGADFKALVYEYMQNGSLEEW 771
++ + +H N++ ++ C+ ++F +A++ + G E
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 772 LHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAH 830
L + +G+P L L L+ + +A + +L +C +H D+ NVLL + VA
Sbjct: 147 LDKEDGRP----LELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAK 198
Query: 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT 890
+ DFGLAR I Y+ GN + E +V
Sbjct: 199 IGDFGLAR------------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQ 240
Query: 891 GDVYSLGVMLLEMFT 905
DV+S G++L E+F+
Sbjct: 241 SDVWSYGILLWEIFS 255
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 80
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 81 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 140
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 141 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 190
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 191 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 228
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 229 VGCIMAELLTGR 240
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 393 LRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDN 452
L NLQ +S+N + + +T L+L+ N L +P + N NL L+LS N
Sbjct: 231 LSNLQIFNISANIFKYD---------FLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHN 280
Query: 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT 512
+L ++P ++ + L F N + +LP E GNL NL L + GN + LT
Sbjct: 281 RLT-SLPAELGSCFQLKYFYFFDN--MVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILT 337
Query: 513 --GCTGLEIFHMQGNSFRGSIPL 533
TGL IF+++ N R IPL
Sbjct: 338 EKSVTGL-IFYLRDN--RPEIPL 357
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 13 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQ 72
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 73 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 132
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 133 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 182
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 183 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 220
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 221 VGCIMAELLTGR 232
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 62
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 63 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 122
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 123 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFG 172
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 173 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 210
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 211 VGCIMAELLTGR 222
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 71
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 72 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 131
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 132 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 181
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 182 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 219
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 220 VGCIMAELLTGR 231
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLXQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 49.3 bits (116), Expect = 1e-05, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ Y G+L E+L + N PE
Sbjct: 100 HKNIINLLGACTQ---DGPLY--VIVAYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 127 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFG 176
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 177 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 214
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 215 VGCIMAELLTGR 226
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 170
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + ++
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGAT 216
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 217 WTLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 252
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 95/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + + Q L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILR-- 132
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 133 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 173
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 174 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 80/164 (48%), Gaps = 13/164 (7%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK 740
+++ +IG GSFG V++ L E+ VA+K ++Q K+ E +++R +H N++
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIK--KVLQDKRFKN--RELQIMRIVKHPNVVD 96
Query: 741 IIT-VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
+ S+ D K F LV EY+ H + + + + LI+ + +
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLK-QTMPMLLIKLY--MYQLLRS 153
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLARFLFA 842
+ Y+H I H D+KP N+LLD V + DFG A+ L A
Sbjct: 154 LAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIA 194
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 103/252 (40%), Gaps = 44/252 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G G G V+ + + VA+K + L ++K + E +++R H N++K+ +
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 747 SIDFKGADFKA---------LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
+ D +V EYM+ L L Q E L + Q L
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLR------ 131
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
++Y+H ++H DLKP+N+ ++ D+V + DFGLAR M+ S
Sbjct: 132 -GLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARI---------MDPHYSH- 177
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
G++ G + K P L + D+++ G + EM T + +F G
Sbjct: 178 -----KGHLSEGLVTKWYRSPRLLLSPNNYTKAI-DMWAAGCIFAEMLTGK----TLFAG 227
Query: 917 GLTLHEFCKMAL 928
HE +M L
Sbjct: 228 A---HELEQMQL 236
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMEPEVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 222
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 56/228 (24%), Positives = 105/228 (46%), Gaps = 35/228 (15%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V K +G +AVK I + K + + ++ T +
Sbjct: 15 LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT--------VDCP 66
Query: 746 SSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
++ F GA F+ + E M + SL+++ Q + + ++ + IA+ + A+E
Sbjct: 67 FTVTFYGALFREGDVWICMELM-DTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALE 123
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
+LH ++H D+KPSNVL++ + DFG++ +L D + + + G
Sbjct: 124 HLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD---DVAKDIDA------GC 172
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Y+ P I LN + G SV D++SLG+ ++E+ R P
Sbjct: 173 KPYMAPERINPELN----QKGY----SVKSDIWSLGITMIELAILRFP 212
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 7 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 66
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 67 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 126
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DFG
Sbjct: 127 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFG 176
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 177 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 214
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 215 VGCIMAELLTGR 226
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 37/254 (14%)
Query: 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN 732
E +E ++G+G++G VY G N +A+K + + E + ++
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 733 TRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNI 792
+H+N+++ + F F + E + GSL L G P + I
Sbjct: 62 LKHKNIVQYLG-----SFSENGFIKIFMEQVPGGSLSALLRSKWG-PLKDNEQTIGFYTK 115
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLFARPFDTSMET 851
I ++YLH + IVH D+K NVL++ + V +SDFG ++ L + ET
Sbjct: 116 QI--LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG--INPCTET 168
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR---- 907
GT+ Y+ P I K G G A D++SLG ++EM T +
Sbjct: 169 ------FTGTLQYMAPEIIDKGPR------GYGKAA----DIWSLGCTIIEMATGKPPFY 212
Query: 908 ---RPTNCMFQGGL 918
P MF+ G+
Sbjct: 213 ELGEPQAAMFKVGM 226
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 37 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 92
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 93 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 175
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 74 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 129
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 130 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 172
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 173 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 212
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 213 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 260
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 132
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 133 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 173
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 174 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 17 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 76
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 77 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 134
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 135 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 175
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 176 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 218
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 28 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 87
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 88 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 136
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 137 IVLTFEYLH---SLDLIYRDLKPENLLIDEQGYIQVTDFGFAK-----------RVKGRT 182
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 183 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 218
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 132
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 133 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 173
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 174 EMAGFVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 35 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 90
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 91 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 133
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 134 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 173
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 174 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 133
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 134 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 174
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 175 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 37 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 92
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 93 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 175
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 30 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 85
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 86 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 168
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 216
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 30 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 85
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 86 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 168
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 216
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 16 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 75
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 76 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 133
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 134 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 174
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 175 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 217
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 29 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 84
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 85 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 127
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 128 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 167
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 168 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 215
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 141
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 142 -----GLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLAR-----------HTDD 182
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 183 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 225
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y +L N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 37 AQGIVCAAYDAVLDRN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNV- 92
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE+ E+ D +L Q + + +D
Sbjct: 93 ----------------FTPQKTLEEF-QDVYLVMELMDANLCQVIQMELDHERMSYLLYQ 135
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 136 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 175
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEMVRHK 223
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 42 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 53/242 (21%)
Query: 687 IGQGSFGSVYKGILGE----------NGTFVAVKIL-NLMQKGALKSFVAECEVLRNT-R 734
+G+G+FG V ++ E VAVK+L + + L V+E E+++ +
Sbjct: 43 LGEGAFGQV---VMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGK 99
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL-----------HQSNGQPEVCD 783
H+N+I ++ C+ G + ++ Y G+L E+L + N PE
Sbjct: 100 HKNIINLLGACTQ---DGPLY--VIVGYASKGNLREYLRARRPPGMEYSYDINRVPEE-Q 153
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
++ ++ +A +EYL +H DL NVL+ + V ++DFGLAR +
Sbjct: 154 MTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDI--N 208
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
D +T + + +K ++ P E + DV+S GV++ E+
Sbjct: 209 NIDYYKKTTNGRLPVK----WMAP------------EALFDRVYTHQSDVWSFGVLMWEI 252
Query: 904 FT 905
FT
Sbjct: 253 FT 254
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 142
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 143 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 188
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 189 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 224
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 15 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 75 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 132
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 133 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 173
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 174 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 216
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 103/228 (45%), Gaps = 34/228 (14%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
IG+G++GSV K + +G +AVK I + + + K + + +V+ + I
Sbjct: 30 IGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYI------ 83
Query: 746 SSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
+ F GA F+ + E M + + + + +V ++ ++ +A A+
Sbjct: 84 --VQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLAT--VKALN 139
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
+L + + I+H D+KPSN+LLD + DFG++ L D+ +T+ + G
Sbjct: 140 HLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQL----VDSIAKTRDA-----GC 188
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Y+ P I + + V DV+SLG+ L E+ T R P
Sbjct: 189 RPYMAPERIDPSASRQGYD--------VRSDVWSLGITLYELATGRFP 228
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 24 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 83
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 84 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 141
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 142 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 182
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 183 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 18 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 77
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 78 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 135
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 136 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 177 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 219
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 86/200 (43%), Gaps = 27/200 (13%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRH 735
T+E+ +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ SI +G F LV++ + G L E + E IQ++
Sbjct: 63 PNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+E ++H IVH DLKP N+LL ++DFGLA + Q
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV--------QGDQ 160
Query: 853 SSSIGIKGTVGYVPPGNIAK 872
+ G GT GY+ P + K
Sbjct: 161 QAWFGFAGTPGYLSPEVLRK 180
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 136
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 137 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 178 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 30 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 85
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 86 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 128
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 129 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 168
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 169 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 216
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 94/232 (40%), Gaps = 57/232 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 41 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 96
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 97 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 139
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 140 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 179
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
GT + P + + P + GMG + +V D++S+G ++ EM +
Sbjct: 180 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DLWSVGCIMGEMVCHK 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 42 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 101
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 102 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 159
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 160 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 200
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 201 EMXGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 243
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 88/204 (43%), Gaps = 35/204 (17%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRH 735
T+++ +G+G+F V + + A KI+N + A + E + R +H
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKH 89
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL----HQSNGQPEVCDLSLIQRLN 791
N++++ SI +G F LV++ + G L E + + S C +++ +N
Sbjct: 90 PNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVN 144
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTS 848
++H H IVH DLKP N+LL ++DFGLA +
Sbjct: 145 ----------HIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLA-------IEVQ 184
Query: 849 METQSSSIGIKGTVGYVPPGNIAK 872
E Q + G GT GY+ P + K
Sbjct: 185 GE-QQAWFGFAGTPGYLSPEVLRK 207
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 143
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 144 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 185 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 21 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 80
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 81 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 138
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 139 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 179
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 180 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 222
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS-----FVAECEVLRNTRH 735
+ +G G++G V +L + + + +++K ++ + + E VL+ H
Sbjct: 39 YQRVKKLGSGAYGEV---LLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQRLNIAI 794
N++K+ F+ LV E + G L +E +H+ EV +I+++
Sbjct: 96 PNIMKLYDF-----FEDKRNYYLVMECYKGGELFDEIIHRMKFN-EVDAAVIIKQV---- 145
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMET 851
S + YLH H IVH DLKP N+LL + D + + DFGL+ E
Sbjct: 146 --LSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS---------AVFEN 191
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
Q GT Y+ P + K + C DV+S+GV+L
Sbjct: 192 QKKMKERLGTAYYIAPEVLRKKYDEKC-------------DVWSIGVILF 228
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 53/198 (26%), Positives = 84/198 (42%), Gaps = 33/198 (16%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRH 735
T+E+ +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ SI +G F LV++ + G L E + E IQ++
Sbjct: 63 PNIVRL---HDSISEEG--FHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQI----- 112
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+E ++H IVH DLKP N+LL ++DFGLA +E Q
Sbjct: 113 ----LESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLA-----------IEVQ 157
Query: 853 SSS---IGIKGTVGYVPP 867
G GT GY+ P
Sbjct: 158 GDQQAWFGFAGTPGYLSP 175
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 36 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 92 ----------------FTPQKSLEEF-QDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 175 --TAGTSFMMTPYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 218
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 93
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTL 149
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 150 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-- 204
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 205 ----------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 48.5 bits (114), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/239 (24%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-- 202
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 203 ----------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 25/175 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--------LMQKGALKSFVAEC 727
E + ++S+ + +G G+FG V+ + E V VK + ++ L E
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD--LS 785
+L H N+IK++ + F+ F LV E ++GS + + P + + S
Sbjct: 81 AILSRVEHANIIKVLDI-----FENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPLAS 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
I R + SA+ YL I+H D+K N+++ D + DFG A +L
Sbjct: 134 YIFR-----QLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL 180
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 100/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + D+G
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVAECEVLRNTRHRNLI 739
++ IG+G++G V T VA+K ++ + + + E ++L RH N+I
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVI 104
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
I + + + +V + M+ + Q +C L Q L
Sbjct: 105 GIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYF-LYQILR-------G 156
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++Y+H ++H DLKPSN+L++ + DFGLAR T T+ +
Sbjct: 157 LKYIH---SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVA---- 209
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T Y P MLN G S+ D++S+G +L EM + R
Sbjct: 210 -TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLSNR 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F IG GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 142
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 143 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 183
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 184 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 226
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 62 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 170
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 171 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 216
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 217 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 252
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-------LNW 124
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFG A+ L A + E
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG- 180
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 181 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 216
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 78 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-------LNW 124
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFG A+ L A + E
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG- 180
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 181 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 216
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 79
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 80 NPHVCRLLGICLTSTVQ------LIMQLMPFGCLLDYVREHKDNIGSQYL-------LNW 126
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFG A+ L A + E
Sbjct: 127 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG- 182
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 183 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 218
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 52/247 (21%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 34 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 93
Query: 729 VLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL--------EEWLHQSNGQP 779
++ + +H N++ ++ C+ G ++ EY G L E L + +G+P
Sbjct: 94 IMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 780 EVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
L L L+ + +A + +L +C +H D+ NVLL + VA + DFGLAR
Sbjct: 149 ----LELRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR 200
Query: 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898
I Y+ GN + E +V DV+S G+
Sbjct: 201 ------------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 242
Query: 899 MLLEMFT 905
+L E+F+
Sbjct: 243 LLWEIFS 249
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 143
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 144 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTAD 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 185 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 227
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 57/228 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + Y IL N VA+K L+ + K E +++ H+N+I ++ V
Sbjct: 38 AQGIVCAAYDAILERN---VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNV- 93
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ SLEE+ E+ D +L Q + + +D
Sbjct: 94 ----------------FTPQKSLEEF-QDVYIVMELMDANLCQVIQMELDHERMSYLLYQ 136
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 137 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 176
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT + P + + P + GMG + +V D++S+G ++ EM
Sbjct: 177 --TAGTSFMMVPFVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGEM 220
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 129
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 130 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 179
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 180 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 223
Query: 906 RR 907
R
Sbjct: 224 NR 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 143
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 144 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTAD 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 185 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 149
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 150 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 199
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 200 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 243
Query: 906 RR 907
R
Sbjct: 244 NR 245
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 47/232 (20%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK-----SFVAECEVLRNTRHRNLIK 740
M+G+GSFG V K AVK++N K + K + + E E+L+ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + + + +V E G L + + + E +I+++ S I
Sbjct: 86 LFEI-----LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV------FSGI 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
Y+H H IVH DLKP N+LL + D + DFGL+ T + +
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKD 182
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + + C DV+S GV+L + + P
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKC-------------DVWSAGVILYILLSGTPP 221
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 59/232 (25%), Positives = 96/232 (41%), Gaps = 47/232 (20%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK-----SFVAECEVLRNTRHRNLIK 740
M+G+GSFG V K AVK++N K + K + + E E+L+ H N++K
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVIN---KASAKNKDTSTILREVELLKKLDHPNIMK 85
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + + + +V E G L + + + E +I+++ S I
Sbjct: 86 LFEI-----LEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQV------FSGI 134
Query: 801 EYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
Y+H H IVH DLKP N+LL + D + DFGL+ T + +
Sbjct: 135 TYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS---------TCFQQNTKMKD 182
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P + + C DV+S GV+L + + P
Sbjct: 183 RIGTAYYIAPEVLRGTYDEKC-------------DVWSAGVILYILLSGTPP 221
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD------LSLIQRL 790
N++ ++ C+ G +V E+ + G+L +L + L+L +
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+ +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 148 XYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDP------ 198
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 199 ------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 681 FSSSNMIGQGSFGSVY--KGILGEN-GTFVAVKILN--LMQKGALKSF--VAECEVLRNT 733
F ++G+G +G V+ + + G N G A+K+L ++ + A + AE +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H ++ +I F+ L+ EY+ G L L + E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
L H Q I++ DLKP N++L+H ++DFGL + S+ +
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------ESIHDGT 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+ P E M S + D +SLG ++ +M T P
Sbjct: 177 VTHXFCGTIEYMAP------------EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 105/244 (43%), Gaps = 32/244 (13%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNG--SLEEWLHQSNGQPEVCD 783
E ++L RH N+I I + + + +V + M+ L + H SN +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDH--ICY 132
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 133 F-LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPD 181
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
T T+ + T Y P MLN G S+ D++S+G +L EM
Sbjct: 182 HDHTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEM 225
Query: 904 FTRR 907
+ R
Sbjct: 226 LSNR 229
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 26 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 85
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 86 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 143
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 144 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTAD 184
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 185 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 100/236 (42%), Gaps = 41/236 (17%)
Query: 681 FSSSNMIGQGSFGSVY--KGILGEN-GTFVAVKILN--LMQKGALKSF--VAECEVLRNT 733
F ++G+G +G V+ + + G N G A+K+L ++ + A + AE +L
Sbjct: 19 FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H ++ +I F+ L+ EY+ G L L + E + +++A
Sbjct: 79 KHPFIVDLIYA-----FQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMA 133
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
L H Q I++ DLKP N++L+H ++DFGL + S+ +
Sbjct: 134 ---------LGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------ESIHDGT 176
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+ P E M S + D +SLG ++ +M T P
Sbjct: 177 VTHTFCGTIEYMAP------------EILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 86
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 87 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 135
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 136 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 181
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 182 WTLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 19 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 78
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 79 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 137
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 138 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 187
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 188 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 231
Query: 906 RR 907
R
Sbjct: 232 NR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 129
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 130 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 179
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 180 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 223
Query: 906 RR 907
R
Sbjct: 224 NR 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 48.1 bits (113), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++ G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFGLA+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 73 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 131
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 132 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 181
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 182 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 225
Query: 906 RR 907
R
Sbjct: 226 NR 227
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 94/234 (40%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 25 EVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 84
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 85 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 142
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 143 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 183
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 184 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 226
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 77
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 78 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 124
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFG A+ L A + E
Sbjct: 125 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG- 180
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 181 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 216
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 134 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 184 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 227
Query: 906 RR 907
R
Sbjct: 228 NR 229
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTXXKASK 171
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 172 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 206
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 55/233 (23%), Positives = 99/233 (42%), Gaps = 41/233 (17%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAV-----KILNLMQKGALKSFVAECEVLRNTR 734
EF ++G G+FG+VYKG+ G V + ++ A K + E V+ +
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 75
Query: 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNI 792
+ ++ +++ +C + + L+ + M G L +++ H+ N + LN
Sbjct: 76 NPHVCRLLGICLTSTVQ------LITQLMPFGCLLDYVREHKDNIGSQYL-------LNW 122
Query: 793 AIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ +A + YL +VH DL NVL+ ++DFG A+ L A + E
Sbjct: 123 CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG- 178
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
G VP K + L + + + + S DV+S GV + E+ T
Sbjct: 179 ----------GKVP----IKWMALESILHRIYTHQS---DVWSYGVTVWELMT 214
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ K ++ E+ + G+L +L + PE L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-- 193
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 194 ----------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Composition-based stats.
Identities = 58/239 (24%), Positives = 103/239 (43%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ K ++ E+ + G+L +L + PE L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-- 193
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 194 ----------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 103/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 134 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 183
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 184 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 227
Query: 906 RR 907
R
Sbjct: 228 NR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 129
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 130 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD 179
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 180 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 223
Query: 906 RR 907
R
Sbjct: 224 NR 225
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 104/246 (42%), Gaps = 50/246 (20%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 729 VLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL--------EEWLHQSNGQP 779
++ + +H N++ ++ C+ G ++ EY G L E L + +G+P
Sbjct: 102 IMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 780 EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839
L L L+ + +A + +L +H D+ NVLL + VA + DFGLAR
Sbjct: 157 ----LELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR- 208
Query: 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
I Y+ GN + E +V DV+S G++
Sbjct: 209 -----------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 251
Query: 900 LLEMFT 905
L E+F+
Sbjct: 252 LWEIFS 257
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 11 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 70
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 71 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 129
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 130 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 179
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 180 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 223
Query: 906 RR 907
R
Sbjct: 224 NR 225
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 92/228 (40%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + R +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTW---------- 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 -XLCGTPEYLAPEIII----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 106 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 154
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 155 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 199
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 200 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 234
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 101/242 (41%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAV-KILNLMQKGALKSFVA 725
P + ++ + +++ + IG+G++G V N VA+ KI + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 134 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 184 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 227
Query: 906 RR 907
R
Sbjct: 228 NR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 134
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 135 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 184
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 185 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 228
Query: 906 RR 907
R
Sbjct: 229 NR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 17 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 76
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 77 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 135
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 136 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 185
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 186 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 229
Query: 906 RR 907
R
Sbjct: 230 NR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 8 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 67
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 68 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 126
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 127 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 176
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 177 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 220
Query: 906 RR 907
R
Sbjct: 221 NR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 134 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 183
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 184 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 227
Query: 906 RR 907
R
Sbjct: 228 NR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 127
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 128 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 177
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 178 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 221
Query: 906 RR 907
R
Sbjct: 222 NR 223
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 95/228 (41%), Gaps = 28/228 (12%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVAECEVLRNTRHRNLI 739
+++ + IG+G++G V N VA+K ++ + + + E ++L RH N+I
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
I + + + +V + M+ + Q +C L Q L
Sbjct: 85 GINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF-LYQILR-------G 136
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK 859
++Y+H ++H DLKPSN+LL+ + DFGLAR D +
Sbjct: 137 LKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVA-----DPDHDHTGFLTEYV 188
Query: 860 GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
T Y P MLN G S+ D++S+G +L EM + R
Sbjct: 189 ATRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLSNR 225
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 9 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 68
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 69 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 127
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 128 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 177
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 178 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 221
Query: 906 RR 907
R
Sbjct: 222 NR 223
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 83 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 131
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 132 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 176
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 177 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 211
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 171
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 172 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 206
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EYSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 15 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 74
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 75 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 133
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 134 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA----- 178
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
D + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 179 DPDHDHTGFLXEXVATRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 227
Query: 906 RR 907
R
Sbjct: 228 NR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 47.8 bits (112), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 100/242 (41%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 16 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR 75
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 76 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 134
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 135 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVA----- 179
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
D + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 180 DPDHDHTGFLXEXVATRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 228
Query: 906 RR 907
R
Sbjct: 229 NR 230
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 19 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 78
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 79 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILR-- 136
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGL R T
Sbjct: 137 -----GLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCR-----------HTDD 177
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 178 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 220
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WTLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 81 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 129
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 130 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 174
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 175 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 209
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ +M
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYQM 231
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 131
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 132 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD 181
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 182 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 225
Query: 906 RR 907
R
Sbjct: 226 NR 227
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 77/181 (42%), Gaps = 2/181 (1%)
Query: 394 RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN-HLQGNIPPSLGNCKNLVSLNLSDN 452
RNL + L SN L G ++ LTL+ L LS N L+ P + +L +L+L
Sbjct: 55 RNLTILWLHSNALAGIDAAAFTGLTLLEQLDLSDNAQLRVVDPTTFRGLGHLHTLHLDRC 114
Query: 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT 512
L P + L ++L L +N+L +L NL L++ GN+
Sbjct: 115 GLQELGPGLFRGLAAL-QYLYLQDNNLQALPDNTFRDLGNLTHLFLHGNRIPSVPEHAFR 173
Query: 513 GCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSY 572
G L+ + N P + R L + L L NNLS E L L L+YL L+
Sbjct: 174 GLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLPAEVLVPLRSLQYLRLND 233
Query: 573 N 573
N
Sbjct: 234 N 234
Score = 37.0 bits (84), Expect = 0.051, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 59/153 (38%), Gaps = 2/153 (1%)
Query: 423 LFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNN-HLNG 481
+FL N + S +C+NL L L N L G + T TL LDL +N L
Sbjct: 36 IFLHGNRISYVPAASFQSCRNLTILWLHSNALAG-IDAAAFTGLTLLEQLDLSDNAQLRV 94
Query: 482 SLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSI 541
P L +L L++ P G L+ ++Q N+ + + R L ++
Sbjct: 95 VDPTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNL 154
Query: 542 KELDLSCNNLSGQIPEFLENLSFLEYLNLSYNH 574
L L N + L L+ L L NH
Sbjct: 155 THLFLHGNRIPSVPEHAFRGLHSLDRLLLHQNH 187
Score = 33.5 bits (75), Expect = 0.63, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 387 PREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVS 446
P L +L + L LQ P L + L+L N+LQ + + NL
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTH 156
Query: 447 LNLSDNKLIGAVPQQILT-ITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFS 504
L L N+ I +VP+ + +L R L L NH+ P +L L+ LY+ N S
Sbjct: 157 LFLHGNR-IPSVPEHAFRGLHSLDRLL-LHQNHVARVHPHAFRDLGRLMTLYLFANNLS 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 91/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + + A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFAEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 93/234 (39%), Gaps = 34/234 (14%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
E + + +G G++GSV + G VAVK L+ + + K E +L++
Sbjct: 29 EVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 88
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+H N+I ++ V + + ++ L + + + Q L
Sbjct: 89 KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILR-- 146
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++Y+H I+H DLKPSN+ ++ D + DFGLAR T
Sbjct: 147 -----GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDD 187
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907
G T Y P MLN + Y T D++S+G ++ E+ T R
Sbjct: 188 EMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLTGR 230
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 80 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 128
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 129 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 173
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 174 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 208
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 54/255 (21%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 31 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 90
Query: 726 ECEVLRNTRHRNLIKI--ITVCSSID----------FKGAD-FKALVYEYMQNGSLEEWL 772
E ++L RH N+I I I +I+ GAD +K L +++ N + +L
Sbjct: 91 EIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYFL 150
Query: 773 HQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832
+Q + ++Y+H ++H DLKPSN+LL+ +
Sbjct: 151 YQ---------------------ILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIC 186
Query: 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892
DFGLAR T T+ + T Y P MLN G S+ D
Sbjct: 187 DFGLARVADPDHDHTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--D 230
Query: 893 VYSLGVMLLEMFTRR 907
++S+G +L EM + R
Sbjct: 231 IWSVGCILAEMLSNR 245
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFGLA+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 36 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 95
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 96 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEM------------FSHLRRIGRFXEPHA 138
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 139 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 184
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 185 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA----ECEVLRNTRHRNLIK 740
+++G+GS+G V + + E AVKIL + + + A E ++LR RH+N+I+
Sbjct: 11 DLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQ 70
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
++ V + + + +V EY G ++E L + PE + Q + +
Sbjct: 71 LVDVLYNEEKQKM---YMVMEYCVCG-MQEML---DSVPEK-RFPVCQAHGYFCQLIDGL 122
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
EYLH IVH D+KP N+LL +S G+A L PF ++S +G
Sbjct: 123 EYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEAL--HPFAADDTCRTS----QG 173
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ + PP IA G+ + + D++S GV L + T P
Sbjct: 174 SPAFQPP-EIAN---------GLDTFSGFKVDIWSAGVTLYNITTGLYP 212
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 57/235 (24%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCD------LSLIQRL 790
N++ ++ C+ G +V E+ + G+L +L + L+L +
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLI 147
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+ +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 148 CYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDP------ 198
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
YV G+ L E ++ DV+S GV+L E+F+
Sbjct: 199 ------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+L+D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 171
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 172 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 75 GVITE------NPVWIIMELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAY 123
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 124 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 168
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 169 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 203
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 34 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 93
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 94 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEM------------FSHLRRIGRFXEPHA 136
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 137 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 182
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 17/170 (10%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY+ G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
+ EYLH +++ DLKP N+L+D V+DFG A+ + R +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTW 196
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 139/321 (43%), Gaps = 59/321 (18%)
Query: 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV-AECEVLRNTR-HRNLIK 740
+++G+G+ V I AVKI+ Q G ++S V E E+L + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+I F+ D LV+E M+ GS+ +H+ E+ ++Q D+ASA+
Sbjct: 76 LIEF-----FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVS--DFGLARFLFARPFDTSMETQSSSIG 857
++LH+ I H DLKP N+L +H + V+ V DFGL + D S + +
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNG-DCSPISTPELLT 180
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG---DVYSLGVMLLEM------FTRRR 908
G+ Y+ P + EAS+ D++SLGV+L + F R
Sbjct: 181 PCGSAEYMAPEVVE----------AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
Query: 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACS 968
++C + G C+ L E + E W+ ++C+
Sbjct: 231 GSDCGWDRGEAC-PACQNMLFESIQEGKYEFPDKDWAH------------------ISCA 271
Query: 969 MESPIERMEMRDVLAKLCAAR 989
+ I ++ +RD +L AA+
Sbjct: 272 AKDLISKLLVRDAKQRLSAAQ 292
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 47.0 bits (110), Expect = 5e-05, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK----SFVAECEVLRNTRHRNLIK 740
+++G G+F V IL E+ + + + K AL+ S E VL +H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + ++ L+ + + G L + + + E LI + A+
Sbjct: 81 LDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 801 EYLHHHCQPPIVHGDLKPSNVL---LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
+YLH IVH DLKP N+L LD D +SDFGL++ ME S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVLS 176
Query: 858 IK-GTVGYVPPGNIAK 872
GT GYV P +A+
Sbjct: 177 TACGTPGYVAPEVLAQ 192
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 90/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E+G A+KIL+ + LK + E +L+
Sbjct: 62 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 121
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 122 PFLVKL-----EFSFKDNSNLYMVMEYVAGGEM------------FSHLRRIGRFXEPHA 164
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 165 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 210
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 252
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 102/242 (42%), Gaps = 28/242 (11%)
Query: 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL-KSFVA 725
P + ++ + +++ + IG+G++G V N VA+K ++ + + +
Sbjct: 13 PEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR 72
Query: 726 ECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLS 785
E ++L RH N+I I + + + +V + M+ + Q +C
Sbjct: 73 EIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF- 131
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
L Q L ++Y+H ++H DLKPSN+LL+ + DFGLAR
Sbjct: 132 LYQILR-------GLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHD 181
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
T T+ + T Y P MLN G S+ D++S+G +L EM +
Sbjct: 182 HTGFLTEYVA-----TRWYRAP---EIMLN------SKGYTKSI--DIWSVGCILAEMLS 225
Query: 906 RR 907
R
Sbjct: 226 NR 227
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 506
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + + DFGL+R++ S K +
Sbjct: 507 LESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYM------------EDSTYYKASK 551
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 552 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 586
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 90/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFGLA+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 97/245 (39%), Gaps = 50/245 (20%)
Query: 685 NMIGQGSFGSVYKGI---LGENGTFVAVKILNLMQKG---ALKSFVAECEVLRNT-RHRN 737
++G G+FG V + + G + V + L +K ++ ++E +++ H N
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHEN 110
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ--------------PEVCD 783
++ ++ C+ G + L++EY G L +L + E D
Sbjct: 111 IVNLLGACT---LSGPIY--LIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 784 LSLI---QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
L+++ L A +A +E+L VH DL NVL+ H V + DFGLAR
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDLAARNVLVTHGKVVKICDFGLAR-- 220
Query: 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
I YV GN + E ++ DV+S G++L
Sbjct: 221 ----------------DIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILL 264
Query: 901 LEMFT 905
E+F+
Sbjct: 265 WEIFS 269
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 47.0 bits (110), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 2/181 (1%)
Query: 394 RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN-HLQGNIPPSLGNCKNLVSLNLSDN 452
RNL + L SN L ++ L L+ L LS N L+ P + L +L+L
Sbjct: 55 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 114
Query: 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT 512
L P + L ++L L +N L +L NL L++ GN+ S
Sbjct: 115 GLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 173
Query: 513 GCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSY 572
G L+ + N P + R L + L L NNLS E L L L+YL L+
Sbjct: 174 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 233
Query: 573 N 573
N
Sbjct: 234 N 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK----SFVAECEVLRNTRHRNLIK 740
+++G G+F V IL E+ + + + K AL+ S E VL +H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + ++ L+ + + G L + + + E LI + A+
Sbjct: 81 LDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 801 EYLHHHCQPPIVHGDLKPSNVL---LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
+YLH IVH DLKP N+L LD D +SDFGL++ ME S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVLS 176
Query: 858 IK-GTVGYVPPGNIAK 872
GT GYV P +A+
Sbjct: 177 TACGTPGYVAPEVLAQ 192
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK----SFVAECEVLRNTRHRNLIK 740
+++G G+F V IL E+ + + + K AL+ S E VL +H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + ++ L+ + + G L + + + E LI + A+
Sbjct: 81 LDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 801 EYLHHHCQPPIVHGDLKPSNVL---LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
+YLH IVH DLKP N+L LD D +SDFGL++ ME S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVLS 176
Query: 858 IK-GTVGYVPPGNIAK 872
GT GYV P +A+
Sbjct: 177 TACGTPGYVAPEVLAQ 192
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 53/196 (27%), Positives = 85/196 (43%), Gaps = 35/196 (17%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALK----SFVAECEVLRNTRHRNLIK 740
+++G G+F V IL E+ + + + K AL+ S E VL +H N++
Sbjct: 24 DVLGTGAFSEV---ILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVA 80
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ + ++ L+ + + G L + + + E LI + A+
Sbjct: 81 LDDI-----YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLI------FQVLDAV 129
Query: 801 EYLHHHCQPPIVHGDLKPSNVL---LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
+YLH IVH DLKP N+L LD D +SDFGL++ ME S +
Sbjct: 130 KYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK----------MEDPGSVLS 176
Query: 858 IK-GTVGYVPPGNIAK 872
GT GYV P +A+
Sbjct: 177 TACGTPGYVAPEVLAQ 192
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 85/219 (38%), Gaps = 34/219 (15%)
Query: 693 GSVYKGILGENGTFVAVKILNLMQKGALKS--FVAECEVLRNTRHRNLIKIITVCSSIDF 750
G ++KG G + VK+L + KS F EC LR H N++ ++ C S
Sbjct: 24 GELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS--- 78
Query: 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP 810
A L+ + GSL LH+ G V D S Q + A+D A +L H +P
Sbjct: 79 PPAPHPTLITHWXPYGSLYNVLHE--GTNFVVDQS--QAVKFALDXARGXAFL-HTLEPL 133
Query: 811 IVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNI 870
I L +V +D D A +S + +F F P G +V P +
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADV-KFSFQSP------------GRXYAPAWVAPEAL 180
Query: 871 AKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
K + D +S V+L E+ TR P
Sbjct: 181 QKKPE---------DTNRRSADXWSFAVLLWELVTREVP 210
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 74/181 (40%), Gaps = 2/181 (1%)
Query: 394 RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN-HLQGNIPPSLGNCKNLVSLNLSDN 452
RNL + L SN L ++ L L+ L LS N L+ P + L +L+L
Sbjct: 56 RNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRC 115
Query: 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT 512
L P + L ++L L +N L +L NL L++ GN+ S
Sbjct: 116 GLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFR 174
Query: 513 GCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSY 572
G L+ + N P + R L + L L NNLS E L L L+YL L+
Sbjct: 175 GLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLND 234
Query: 573 N 573
N
Sbjct: 235 N 235
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 46.6 bits (109), Expect = 6e-05, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 33/227 (14%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V K +G AVK I + K + + ++ T +
Sbjct: 42 LGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRT--------VDCP 93
Query: 746 SSIDFKGADFK---ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
++ F GA F+ + + + SL+++ Q + + ++ + IA+ + A+E+
Sbjct: 94 FTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGK--IAVSIVKALEH 151
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
LH ++H D+KPSNVL++ DFG++ +L D + + + G
Sbjct: 152 LHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVD---DVAKDIDA------GCK 200
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Y P I LN + G SV D++SLG+ +E+ R P
Sbjct: 201 PYXAPERINPELN----QKGY----SVKSDIWSLGITXIELAILRFP 239
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 121/291 (41%), Gaps = 38/291 (13%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 57 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 110
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426
NQ+T P + L NL + LSSN + S+L LT + L
Sbjct: 111 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG 164
Query: 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKL--------------IGAVPQQILTITTLSRFL 472
N + P L N L L++S NK+ + A QI IT L
Sbjct: 165 -NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 221
Query: 473 DLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529
+L LNG+ ++G +L NL L ++ NQ S P L+G T L + N
Sbjct: 222 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 279
Query: 530 SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 280 ISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 326
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 52 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 105
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQ----------------GNI 410
NQ+T P + L NL + LSSN + GN
Sbjct: 106 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQ 161
Query: 411 PSSL---GNLTLMTDLFLSSNHLQG-NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTIT 466
+ L NLT + L +SSN + ++ L N ++L++ N QI IT
Sbjct: 162 VTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN-----------NQISDIT 210
Query: 467 TLSRFLDLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQ 523
L +L LNG+ ++G +L NL L ++ NQ S P L+G T L +
Sbjct: 211 PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 268
Query: 524 GNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
N PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 269 ANQISNISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 321
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 46.6 bits (109), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 52 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 105
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQ----------------GNI 410
NQ+T P + L NL + LSSN + GN
Sbjct: 106 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQ 161
Query: 411 PSSL---GNLTLMTDLFLSSNHLQG-NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTIT 466
+ L NLT + L +SSN + ++ L N ++L++ N QI IT
Sbjct: 162 VTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATN-----------NQISDIT 210
Query: 467 TLSRFLDLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQ 523
L +L LNG+ ++G +L NL L ++ NQ S P L+G T L +
Sbjct: 211 PLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 268
Query: 524 GNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
N PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 269 ANQISNISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 321
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 78 GVITE------NPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 126
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + DFGL+R++ S K +
Sbjct: 127 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM------------EDSTYYKASK 171
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 172 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 206
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 40/236 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRH 735
N F ++G+G FG V + G A K L + K + E ++L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ--SNGQPEVCDLSLIQRLNIA 793
R ++ + + ++ D LV M G L+ ++ G PE + + A
Sbjct: 244 RFVVSL-----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------RAVFYA 292
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ +E LH IV+ DLKP N+LLD +SD GLA +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---------VHVPEGQ 340
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ G GTVGY+ P E + + D ++LG +L EM + P
Sbjct: 341 TIKGRVGTVGYMAP------------EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 46.2 bits (108), Expect = 8e-05, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 27/186 (14%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKIITV 744
+G+G+F V + + G A KI+N + A + E + R +H N++++
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRL--- 86
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
SI +G + L+++ + G L E + E IQ++ A+ LH
Sbjct: 87 HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV--------LH 136
Query: 805 HHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
H Q +VH DLKP N+LL + ++DFGLA + E Q + G GT
Sbjct: 137 CH-QMGVVHRDLKPENLLLASKLKGAAVKLADFGLA-------IEVEGE-QQAWFGFAGT 187
Query: 862 VGYVPP 867
GY+ P
Sbjct: 188 PGYLSP 193
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY G + L + + S A
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 121/291 (41%), Gaps = 38/291 (13%)
Query: 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSXX 366
G +D V L N +++ F N+L + P + NL T + DI M NQI+ P
Sbjct: 56 GIKSIDGVEYLNNLTQIN---FSNNQLTDITP--LKNL-TKLVDILMNNNQIADITPLAN 109
Query: 367 XXXXXXXXXXXEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426
NQ+T P + L NL + LSSN + S+L LT + L
Sbjct: 110 LTNLTGLTLFN--NQITDIDP--LKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSFG 163
Query: 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKL--------------IGAVPQQILTITTLSRFL 472
N + P L N L L++S NK+ + A QI IT L
Sbjct: 164 -NQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT 220
Query: 473 DLGNNHLNGSLPLEVG---NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529
+L LNG+ ++G +L NL L ++ NQ S P L+G T L + N
Sbjct: 221 NLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISN 278
Query: 530 SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580
PL+ L ++ L+L+ N L P + NL L YL L +N+ P
Sbjct: 279 ISPLA--GLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP 325
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 684 SNMIGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGAL---KSFVAECEVLRNTRHRNLI 739
+ ++G+G FG VY+G+ G + V + + L + F++E +++N H +++
Sbjct: 29 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 88
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+I + + ++ E G L +L ++ +V L L ++ + A
Sbjct: 89 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 137
Query: 800 IEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ YL +C VH D+ N+L+ + DFGL+R++
Sbjct: 138 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI 175
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 684 SNMIGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGAL---KSFVAECEVLRNTRHRNLI 739
+ ++G+G FG VY+G+ G + V + + L + F++E +++N H +++
Sbjct: 13 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 72
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+I + + ++ E G L +L ++ +V L L ++ + A
Sbjct: 73 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 121
Query: 800 IEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ YL +C VH D+ N+L+ + DFGL+R++
Sbjct: 122 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI 159
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.2 bits (108), Expect = 9e-05, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 76/162 (46%), Gaps = 20/162 (12%)
Query: 684 SNMIGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGAL---KSFVAECEVLRNTRHRNLI 739
+ ++G+G FG VY+G+ G + V + + L + F++E +++N H +++
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIV 76
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+I + + ++ E G L +L ++ +V L L ++ + A
Sbjct: 77 KLIGIIEE------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY-----SLQICKA 125
Query: 800 IEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840
+ YL +C VH D+ N+L+ + DFGL+R++
Sbjct: 126 MAYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYI 163
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 66/270 (24%), Positives = 108/270 (40%), Gaps = 55/270 (20%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS------FVAECEVLR 731
++ + +G G++G V +L ++ A + + +++K ++ + + E VL+
Sbjct: 20 SDRYQRVKKLGSGAYGEV---LLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791
H N++K+ F+ LV E + G L + + EV D ++I +
Sbjct: 77 QLDHPNIMKLYEF-----FEDKRNYYLVMEVYRGGELFDEIILRQKFSEV-DAAVIMK-- 128
Query: 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHVSDFGLARFLFARPFDTS 848
+ S YLH H IVH DLKP N+LL+ D + + DFGL+
Sbjct: 129 ---QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS---------AH 173
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908
E GT Y+ P + K + C DV+S GV+L +
Sbjct: 174 FEVGGKMKERLGTAYYIAPEVLRKKYDEKC-------------DVWSCGVILYILLCGYP 220
Query: 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDP 938
P GG T E K EK + DP
Sbjct: 221 PF-----GGQTDQEILKRV--EKGKFSFDP 243
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.2 bits (108), Expect = 1e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + FG
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2Z66|A Chain A, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|B Chain B, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|C Chain C, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z66|D Chain D, Crystal Structure Of The Vt3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 306
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 6/181 (3%)
Query: 399 IGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHL--QGNIPPSLGNCKNLVSLNLSDNKLIG 456
+ L SN LQ LT +T L LSSN L +G S +L L+LS N +I
Sbjct: 33 LELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFNGVI- 91
Query: 457 AVPQQILTITTLSRFLDLGNNHLNGSLPLEVG-NLKNLVALYISGNQFSGEIPVTLTGCT 515
+ L + L LD +++L V +L+NL+ L IS G +
Sbjct: 92 TMSSNFLGLEQLEH-LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 150
Query: 516 GLEIFHMQGNSFRGS-IPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNH 574
LE+ M GNSF+ + +P L+++ LDLS L P +LS L+ LN+S+N+
Sbjct: 151 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNN 210
Query: 575 F 575
F
Sbjct: 211 F 211
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 7/170 (4%)
Query: 172 KLEHISLARNHLTGMLPASI--GNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNG 229
+LEH+ ++L M S+ ++IYL + +SSLE + + N
Sbjct: 102 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161
Query: 230 FTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGR 289
F N DI L NL + P +F++ S+++++++ N F + +
Sbjct: 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 221
Query: 290 LKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPH 339
L +L LD +N++ + +L S L L +N H
Sbjct: 222 LNSLQVLDYSLNHIMTSKKQELQHFP-----SSLAFLNLTQNDFACTCEH 266
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 475 GNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLS 534
GN+ LP L+NL L +S Q P + L++ +M N+F
Sbjct: 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 218
Query: 535 LRSLKSIKELDLSCNNLSGQIPEFLENL-SFLEYLNLSYNHF 575
+ L S++ LD S N++ + L++ S L +LNL+ N F
Sbjct: 219 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 260
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 69/264 (26%), Positives = 120/264 (45%), Gaps = 37/264 (14%)
Query: 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV-AECEVLRNTR-HRNLIK 740
+S ++G+G++ V + +NG AVKI+ Q G +S V E E L + ++N+++
Sbjct: 17 TSELLGEGAYAKVQGAVSLQNGKEYAVKIIE-KQAGHSRSRVFREVETLYQCQGNKNILE 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+I F+ LV+E +Q GS+ + + E + S + R D+A+A+
Sbjct: 76 LIEF-----FEDDTRFYLVFEKLQGGSILAHIQKQKHFNER-EASRVVR-----DVAAAL 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVS--DFGLARFLFARPFDTSMETQSSSIG 857
++LH I H DLKP N+L + + V+ V DF L + M+ +S
Sbjct: 125 DFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLG---------SGMKLNNSCTP 172
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG---DVYSLGVMLLEMFTRRRP--TNC 912
I P G+ M P + +A+ D++SLGV+L M + P +C
Sbjct: 173 ITTPELTTPCGSAEYM--APEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHC 230
Query: 913 MFQGGLTLHEFCKMALPEKVMETV 936
G E C++ K+ E++
Sbjct: 231 GADCGWDRGEVCRVC-QNKLFESI 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 106/251 (42%), Gaps = 61/251 (24%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + + +LG N VAVK L+ + K E +L+ H+N+I ++ V
Sbjct: 34 AQGIVCAAFDTVLGIN---VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV- 89
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE E+ D +L Q +++ +D
Sbjct: 90 ----------------FTPQKTLEE-FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 132
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR T S++
Sbjct: 133 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR------------TASTN 177
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
+ P + + P + GMG + +V D++S+G ++ E+ + +FQ
Sbjct: 178 FMMT-------PYVVTRYYRAPEVILGMGYKENV--DIWSVGCIMGELVK----GSVIFQ 224
Query: 916 GGLTLHEFCKM 926
G + ++ K+
Sbjct: 225 GTDHIDQWNKV 235
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + DF
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFY 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY+ G + L I R
Sbjct: 102 PFLVKL-----EFSFKDNSNLYMVMEYVPGGEM------------FSHLRRIGRFXEPHA 144
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+L+D V+DFG A+
Sbjct: 145 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----------- 190
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + D G
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 91/222 (40%), Gaps = 37/222 (16%)
Query: 687 IGQGSFGSVYKGIL--GENGTF-VAVKIL-NLMQKGALKSFVAECEVLRNTRHRNLIKII 742
IG+G FG V++GI EN VA+K N + F+ E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
V + + ++ E G L +L Q L L + A +++A+ Y
Sbjct: 458 GVITE------NPVWIIMELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAY 506
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L VH D+ NVL+ + DFGL+R++ S K +
Sbjct: 507 LESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYM------------EDSTYYKASK 551
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
G +P K + + + + AS DV+ GV + E+
Sbjct: 552 GKLP----IKWMAPESINFRRFTSAS---DVWMFGVCMWEIL 586
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 679 NEFSSSNMIGQGSFGSV-----YKGILGENGTFVAVKIL----NLMQKGALKSFVAECEV 729
N S +G G+FG V Y I + VAVK+L +L ++ AL S +
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ-------SNGQPEVC 782
L N H N++ ++ C+ G ++ EY G L +L + S P +
Sbjct: 83 LGN--HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 135
Query: 783 DLSLIQRL-----NIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ + + + +A + +L +C +H DL N+LL H + + DFGL
Sbjct: 136 EDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGL 191
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
AR IK YV GN + E + DV+S
Sbjct: 192 AR------------------DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 233
Query: 897 GVMLLEMFT 905
G+ L E+F+
Sbjct: 234 GIFLWELFS 242
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 92/236 (38%), Gaps = 40/236 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS---FVAECEVLRNTRH 735
N F ++G+G FG V + G A K L + K + E ++L
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ--SNGQPEVCDLSLIQRLNIA 793
R ++ + + ++ D LV M G L+ ++ G PE + + A
Sbjct: 244 RFVVSL-----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------RAVFYA 292
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853
++ +E LH IV+ DLKP N+LLD +SD GLA +
Sbjct: 293 AEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---------VHVPEGQ 340
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ G GTVGY+ P E + + D ++LG +L EM + P
Sbjct: 341 TIKGRVGTVGYMAP------------EVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 39/230 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N+F IG GSFG +Y G + VA+K+ N+ K + E ++ R +
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHP--QLLYESKIYR------I 58
Query: 739 IKIITVCSSIDFKG--ADFKALVYEYMQNGSLEEWLHQSNGQPEVC--DLSLIQRLNIAI 794
++ T ++ + G D+ LV + + SLE+ + C LSL L +A
Sbjct: 59 LQGGTGIPNVRWFGVEGDYNVLVMDLL-GPSLEDLFN-------FCSRKLSLKTVLMLAD 110
Query: 795 DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA---HVSDFGLARFLFARPFDTSMET 851
M + +E++H +H D+KP N L+ A ++ DFGLA+ + DTS
Sbjct: 111 QMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAK----KYRDTSTHQ 163
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ Y N+ + +G E S D+ SLG +L+
Sbjct: 164 H---------IPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLM 204
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 12/162 (7%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQK-GALKSFVAECEVLRNTRHR 736
+ + ++IG GS+G V + VA+K IL + + K + E +L H
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
+++K++ + D + D +V E + + ++ E+ +L+ L + +
Sbjct: 113 HVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGV-- 169
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
+Y+H I+H DLKP+N L++ D V DFGLAR
Sbjct: 170 ----KYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + D G
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 89/228 (39%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L+K+ FK +V EY G + L + + S A
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 149
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + +
Sbjct: 150 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRT 195
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 196 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 679 NEFSSSNMIGQGSFGSV-----YKGILGENGTFVAVKIL----NLMQKGALKSFVAECEV 729
N S +G G+FG V Y I + VAVK+L +L ++ AL S +
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ-------SNGQPEVC 782
L N H N++ ++ C+ G ++ EY G L +L + S P +
Sbjct: 99 LGN--HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 151
Query: 783 DLSLIQRL-----NIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ + + + +A + +L +C +H DL N+LL H + + DFGL
Sbjct: 152 EDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGL 207
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
AR IK YV GN + E + DV+S
Sbjct: 208 AR------------------DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 249
Query: 897 GVMLLEMFT 905
G+ L E+F+
Sbjct: 250 GIFLWELFS 258
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--LKSFVAECEVLRNTRH 735
++ + +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ + F LV++ + G L E + E IQ++
Sbjct: 65 PNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----- 114
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTSMETQ 852
+I Y H + IVH +LKP N+LL ++DFGLA +E
Sbjct: 115 -LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----------IEVN 159
Query: 853 SSSI--GIKGTVGYVPPGNIAK 872
S G GT GY+ P + K
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKK 181
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--LKSFVAECEVLRNTRH 735
++ + +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 63
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ + F LV++ + G L E + E IQ++
Sbjct: 64 PNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----- 113
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTSMETQ 852
+I Y H + IVH +LKP N+LL ++DFGLA +E
Sbjct: 114 -LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----------IEVN 158
Query: 853 SSSI--GIKGTVGYVPPGNIAK 872
S G GT GY+ P + K
Sbjct: 159 DSEAWHGFAGTPGYLSPEVLKK 180
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/202 (24%), Positives = 82/202 (40%), Gaps = 32/202 (15%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--LKSFVAECEVLRNTRH 735
++ + +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ + F LV++ + G L E + E IQ++
Sbjct: 65 PNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----- 114
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTSMETQ 852
+I Y H + IVH +LKP N+LL ++DFGLA +E
Sbjct: 115 -LESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLA-----------IEVN 159
Query: 853 SSSI--GIKGTVGYVPPGNIAK 872
S G GT GY+ P + K
Sbjct: 160 DSEAWHGFAGTPGYLSPEVLKK 181
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 679 NEFSSSNMIGQGSFGSV-----YKGILGENGTFVAVKIL----NLMQKGALKSFVAECEV 729
N S +G G+FG V Y I + VAVK+L +L ++ AL S +
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ-------SNGQPEVC 782
L N H N++ ++ C+ G ++ EY G L +L + S P +
Sbjct: 101 LGN--HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 153
Query: 783 DLSLIQRL-----NIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ + + + +A + +L +C +H DL N+LL H + + DFGL
Sbjct: 154 EDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGL 209
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
AR IK YV GN + E + DV+S
Sbjct: 210 AR------------------DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 251
Query: 897 GVMLLEMFT 905
G+ L E+F+
Sbjct: 252 GIFLWELFS 260
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 679 NEFSSSNMIGQGSFGSV-----YKGILGENGTFVAVKIL----NLMQKGALKSFVAECEV 729
N S +G G+FG V Y I + VAVK+L +L ++ AL S +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ-------SNGQPEVC 782
L N H N++ ++ C+ G ++ EY G L +L + S P +
Sbjct: 106 LGN--HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 783 DLSLIQRL-----NIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ + + + +A + +L +C +H DL N+LL H + + DFGL
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGL 214
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
AR IK YV GN + E + DV+S
Sbjct: 215 AR------------------DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
Query: 897 GVMLLEMFT 905
G+ L E+F+
Sbjct: 257 GIFLWELFS 265
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.4 bits (106), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 107/239 (44%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR ++ P
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-- 202
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 203 DXVRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 245
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLHG 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 IG---ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 28/200 (14%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--LKSFVAECEVLRNTRH 735
++ + +G+G+F V + + G A KI+N + A + E + R +H
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ + F LV++ + G L E + E IQ++
Sbjct: 88 PNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI----- 137
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSDFGLARFLFARPFDTSMETQ 852
+I Y H + IVH +LKP N+LL ++DFGLA +
Sbjct: 138 -LESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEVNDS 184
Query: 853 SSSIGIKGTVGYVPPGNIAK 872
+ G GT GY+ P + K
Sbjct: 185 EAWHGFAGTPGYLSPEVLKK 204
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLHG 123
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 124 IG---ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 99/252 (39%), Gaps = 38/252 (15%)
Query: 662 MEQYFPMVSYSELS----EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK 717
M Q P EL+ E + + + +G G++GSV + G VAVK L+ +
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ 60
Query: 718 GAL--KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQS 775
+ K E +L++ +H N+I ++ V + + ++ L +
Sbjct: 61 SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQ 120
Query: 776 NGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
+ + Q L ++Y+H I+H DLKPSN+ ++ D + D G
Sbjct: 121 KLTDDHVQFLIYQILR-------GLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGG 170
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR T G T Y P MLN + Y T D++S
Sbjct: 171 LAR-----------HTDDEMTGYVATRWYRAP---EIMLN--WMHYNQ------TVDIWS 208
Query: 896 LGVMLLEMFTRR 907
+G ++ E+ T R
Sbjct: 209 VGCIMAELLTGR 220
>pdb|3B2D|A Chain A, Crystal Structure Of Human Rp105MD-1 Complex
pdb|3B2D|B Chain B, Crystal Structure Of Human Rp105MD-1 Complex
Length = 603
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 396 LQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI 455
LQ + L++ L+G +PS + L L+ L LS NH S N +L L +
Sbjct: 277 LQELDLTATHLKG-LPSGMKGLNLLKKLVLSVNHFDQLCQISAANFPSLTHLYIR----- 330
Query: 456 GAVPQQILTITTLSRF-----LDLGNNHLNGS--LPLEVGNLKNLVALYISGNQFSGEIP 508
G V + L + L + LDL +N + S L++ NL +L L +S N+ G
Sbjct: 331 GNVKKLHLGVGCLEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQS 390
Query: 509 VTLTGCTGLEIFHMQGNSFRGSIPLS-LRSLKSIKELDLSCNNLSGQIPEFLENLSFLEY 567
C LE+ + + P S ++L ++ L+L+ L L L L +
Sbjct: 391 QAFKECPQLELLDLAFTRLHINAPQSPFQNLHFLQVLNLTYCFLDTSNQHLLAGLPVLRH 450
Query: 568 LNLSYNHFDGEVPTK 582
LNL NHF TK
Sbjct: 451 LNLKGNHFQDGTITK 465
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 91/225 (40%), Gaps = 48/225 (21%)
Query: 390 IGQLRNLQAIGLSSNFLQGNIPSSL--GNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSL 447
+ +L NLQ + LS N ++ + SL NL+ + L LS N G + C L L
Sbjct: 343 LEKLGNLQTLDLSHNDIEASDCCSLQLKNLSHLQTLNLSHNEPLGLQSQAFKECPQLELL 402
Query: 448 NLSDNKLIGAVPQ---------QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYI 498
+L+ +L PQ Q+L +T FLD N HL LP+ L L +
Sbjct: 403 DLAFTRLHINAPQSPFQNLHFLQVLNLTYC--FLDTSNQHLLAGLPV-------LRHLNL 453
Query: 499 SGNQFS-------------GEIPVTLTGCTGL-----EIFHMQG---------NSFRGSI 531
GN F G + V + GL + FH G NS
Sbjct: 454 KGNHFQDGTITKTNLLQTVGSLEVLILSSCGLLSIDQQAFHSLGKMSHVDLSHNSLTCDS 513
Query: 532 PLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD 576
SL LK I L+L+ N+++ P L LS +NLS+N D
Sbjct: 514 IDSLSHLKGIY-LNLAANSINIISPRLLPILSQQSTINLSHNPLD 557
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 87/225 (38%), Gaps = 34/225 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
++F +G GSFG V E G A+KIL+ + LK R + N
Sbjct: 42 DQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNF 101
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
++ + S FK +V EY G + L + + S A +
Sbjct: 102 PFLVKLEFS--FKDNSNLYMVLEYAPGGEMFSHLRR------IGRFSEPHARFYAAQIVL 153
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGI 858
EYLH +++ DLKP N+L+D V+DFG A+ + + +
Sbjct: 154 TFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK-----------RVKGRTWXL 199
Query: 859 KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
GT Y+ P I G +V D ++LGV++ EM
Sbjct: 200 CGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 12/157 (7%)
Query: 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRNLIKI 741
++IG+GS+G VY VA+K +N M + + K + E +L + +I++
Sbjct: 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRL 90
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
+ D D +V E + + L++ P I+ I ++
Sbjct: 91 YDLIIPDDLLKFDELYIVLE-IADSDLKKLF----KTPIFLTEEHIK--TILYNLLLGEN 143
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
++H + I+H DLKP+N LL+ D V DFGLAR
Sbjct: 144 FIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V+ E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFL-----FARPFDTSMET 851
YLH I H DLKP N+ LLD ++ + H+ DFGLA + F F T E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP-EF 184
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888
+ I V Y P G A M ++ + Y + S AS
Sbjct: 185 VAPEI-----VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 97/249 (38%), Gaps = 51/249 (20%)
Query: 679 NEFSSSNMIGQGSFGSV-----YKGILGENGTFVAVKIL----NLMQKGALKSFVAECEV 729
N S +G G+FG V Y I + VAVK+L +L ++ AL S +
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQ-------SNGQPEVC 782
L N H N++ ++ C+ G ++ EY G L +L + S P +
Sbjct: 106 LGN--HMNIVNLLGACT---IGGPTL--VITEYCCYGDLLNFLRRKRDSFICSKTSPAIM 158
Query: 783 DLSLIQRL-----NIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836
+ + + + +A + +L +C +H DL N+LL H + + DFGL
Sbjct: 159 EDDELALDLEDLLSFSYQVAKGMAFLASKNC----IHRDLAARNILLTHGRITKICDFGL 214
Query: 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896
AR IK YV GN + E + DV+S
Sbjct: 215 ARH------------------IKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY 256
Query: 897 GVMLLEMFT 905
G+ L E+F+
Sbjct: 257 GIFLWELFS 265
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 61/217 (28%), Positives = 89/217 (41%), Gaps = 35/217 (16%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V+ E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFL-----FARPFDTSMET 851
YLH I H DLKP N+ LLD ++ + H+ DFGLA + F F T E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP-EF 184
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888
+ I V Y P G A M ++ + Y + S AS
Sbjct: 185 VAPEI-----VNYEPLGLEADMWSIGVITYILLSGAS 216
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 104/227 (45%), Gaps = 40/227 (17%)
Query: 681 FSSSNMIGQGSFGS-VYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNL 738
F +++G G+ G+ VY+G+ +N +IL A + E ++LR + H N+
Sbjct: 26 FCPKDVLGHGAEGTIVYRGMF-DNRDVAVKRILPECFSFADR----EVQLLRESDEHPNV 80
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
I+ C+ K F+ + E + +L+E++ Q + L L + + + S
Sbjct: 81 IRYF--CTE---KDRQFQYIAIE-LCAATLQEYVEQKD----FAHLGL-EPITLLQQTTS 129
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLD----HDMV-AHVSDFGLARFLFARPFDTSMETQS 853
+ +LH IVH DLKP N+L+ H + A +SDFGL + L + S
Sbjct: 130 GLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-----AVGRHSFS 181
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900
G+ GT G++ P +ML+ C E + T D++S G +
Sbjct: 182 RRSGVPGTEGWIAP----EMLSEDCKE-----NPTYTVDIFSAGCVF 219
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 103/252 (40%), Gaps = 63/252 (25%)
Query: 688 GQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVC 745
QG + + +LG N VAVK L+ + K E +L+ H+N+I ++ V
Sbjct: 36 AQGIVCAAFDTVLGIN---VAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNV- 91
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID---------- 795
+ +LEE E+ D +L Q +++ +D
Sbjct: 92 ----------------FTPQKTLEE-FQDVYLVMELMDANLCQVIHMELDHERMSYLLYQ 134
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
M I++LH I+H DLKPSN+++ D + DFGLAR
Sbjct: 135 MLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------- 174
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC-MF 914
T + P + + P + GMG A+V D++S+G ++ E+ C +F
Sbjct: 175 --TACTNFMMTPYVVTRYYRAPEVILGMGYAANV--DIWSVGCIMGELV-----KGCVIF 225
Query: 915 QGGLTLHEFCKM 926
QG + ++ K+
Sbjct: 226 QGTDHIDQWNKV 237
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 57/237 (24%), Positives = 106/237 (44%), Gaps = 46/237 (19%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 93
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-----PEVCD---LSLIQ 788
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 94 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEH 149
Query: 789 RLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTS 848
+ + +A +E+L +H DL N+LL V + DFGLAR + P
Sbjct: 150 LIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDP--DX 204
Query: 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 205 VRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 245
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 45/223 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V+ E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFLFARPFDTSMETQSSSI 856
YLH I H DLKP N+ LLD ++ + H+ DFGLA +E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---------EIEDGVEFK 176
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
I GT +V P +++N L G EA D++S+GV+
Sbjct: 177 NIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVI 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 70
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 71 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 120
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 121 --GIGITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 67/152 (44%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G++G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 72
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 122
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 --GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 87/200 (43%), Gaps = 27/200 (13%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRH 735
T E+ +G+G+F V + + G A I+N + A + E + R +H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
N++++ SI +G + L+++ + G L E + E IQ++ A+
Sbjct: 70 PNIVRL---HDSISEEGHHY--LIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAV- 123
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLARFLFARPFDTSMETQ 852
LH H Q +VH +LKP N+LL + ++DFGLA + E Q
Sbjct: 124 -------LHCH-QMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-------IEVEGE-Q 167
Query: 853 SSSIGIKGTVGYVPPGNIAK 872
+ G GT GY+ P + K
Sbjct: 168 QAWFGFAGTPGYLSPEVLRK 187
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 45/223 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V+ E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFLFARPFDTSMETQSSSI 856
YLH I H DLKP N+ LLD ++ + H+ DFGLA +E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---------EIEDGVEFK 176
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
I GT +V P +++N L G EA D++S+GV+
Sbjct: 177 NIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVI 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 92/223 (41%), Gaps = 45/223 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V+ E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFLFARPFDTSMETQSSSI 856
YLH I H DLKP N+ LLD ++ + H+ DFGLA +E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---------EIEDGVEFK 176
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
I GT +V P +++N L G EA D++S+GV+
Sbjct: 177 NIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVI 207
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 95/236 (40%), Gaps = 36/236 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRH 735
+F+ ++G+GSFG V A+KIL ++Q ++ + E VL
Sbjct: 19 TDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK 78
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ D V EY+ G L + Q V Q + A +
Sbjct: 79 PPFLTQLHSC----FQTVDRLYFVMEYVNGGDLMYHIQQ------VGKFKEPQAVFYAAE 128
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
++ + +LH I++ DLK NV+LD + ++DFG+ + M ++
Sbjct: 129 ISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--------EHMMDGVTT 177
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911
GT Y+ P IA YG + D ++ GV+L EM + P +
Sbjct: 178 REFCGTPDYIAPEIIAYQ------PYGK------SVDWWAYGVLLYEMLAGQPPFD 221
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 138/321 (42%), Gaps = 59/321 (18%)
Query: 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV-AECEVLRNTR-HRNLIK 740
+++G+G+ V I AVKI+ Q G ++S V E E+L + HRN+++
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIE-KQPGHIRSRVFREVEMLYQCQGHRNVLE 75
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+I F+ D LV+E M+ GS+ +H+ E+ ++Q D+ASA+
Sbjct: 76 LIEF-----FEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ------DVASAL 124
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVS--DFGLARFLFARPFDTSMETQSSSIG 857
++LH+ I H DLKP N+L +H + V+ V DF L + D S + +
Sbjct: 125 DFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG-DCSPISTPELLT 180
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG---DVYSLGVMLLEM------FTRRR 908
G+ Y+ P + EAS+ D++SLGV+L + F R
Sbjct: 181 PCGSAEYMAPEVVE----------AFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC 230
Query: 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACS 968
++C + G C+ L E + E W+ ++C+
Sbjct: 231 GSDCGWDRGEAC-PACQNMLFESIQEGKYEFPDKDWAH------------------ISCA 271
Query: 969 MESPIERMEMRDVLAKLCAAR 989
+ I ++ +RD +L AA+
Sbjct: 272 AKDLISKLLVRDAKQRLSAAQ 292
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L K+ FK +V EY G + L + + S A
Sbjct: 102 PFLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 88/228 (38%), Gaps = 40/228 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
L K+ FK +V EY G + L + + S A
Sbjct: 102 PFLTKL-----EFSFKDNSNLYMVMEYAPGGEMFSHLRR------IGRFSEPHARFYAAQ 150
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
+ EYLH +++ DLKP N+++D V+DFG A+ + +
Sbjct: 151 IVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK-----------RVKGRT 196
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ GT Y+ P I G +V D ++LGV++ EM
Sbjct: 197 WXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNT 733
+ + + ++IG+GS+G VY VA+K +N M + + K + E +L
Sbjct: 25 KVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL 84
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
+ +I++ + D D +V E + + L++ L+ I
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTP------IFLTEQHVKTIL 137
Query: 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
++ +++H + I+H DLKP+N LL+ D + DFGLAR
Sbjct: 138 YNLLLGEKFIH---ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 41 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L+K+ FK +V EY G + L I R
Sbjct: 101 PFLVKL-----EFSFKDNSNLYMVMEYAPGGEM------------FSHLRRIGRFXEPHA 143
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+++D V+DFG A+
Sbjct: 144 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 189
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 231
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 43.9 bits (102), Expect = 4e-04, Method: Composition-based stats.
Identities = 57/238 (23%), Positives = 106/238 (44%), Gaps = 47/238 (19%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 92
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ------PEVCD---LSLI 787
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 93 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLE 148
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDT 847
+ + +A +E+L +H DL N+LL V + DFGLAR + P
Sbjct: 149 HLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP--D 203
Query: 848 SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 204 XVRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 245
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 105/271 (38%), Gaps = 49/271 (18%)
Query: 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITV 744
++G G+F V+ G A+K + S E VL+ +H N++ + +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
++ LV + + G L + + + E D SL+ + + SA++YLH
Sbjct: 75 -----YESTTHYYLVMQLVSGGELFDRILERGVYTEK-DASLVIQ-----QVLSAVKYLH 123
Query: 805 HHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
+ IVH DLKP N+L + + ++DFGL++ ME GT
Sbjct: 124 ENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK----------MEQNGIMSTACGT 170
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921
GYV P +A+ S D +S+GV+ T + G +
Sbjct: 171 PGYVAPEVLAQ------------KPYSKAVDCWSIGVI----------TYILLCGYPPFY 208
Query: 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAK 952
E + L EK+ E W D AK
Sbjct: 209 EETESKLFEKIKEGYYEFESPFWDDISESAK 239
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 100/237 (42%), Gaps = 39/237 (16%)
Query: 681 FSSSNMIGQGSFGSVY--KGILGEN-GTFVAVKILN---LMQKGALKSFV-AECEVLRNT 733
F ++G G++G V+ + I G + G A+K+L ++QK E +VL +
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIA 793
R + V F+ L+ +Y+ G L L Q E + I
Sbjct: 116 RQSPFL----VTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTE-------HEVQIY 164
Query: 794 I-DMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ 852
+ ++ A+E+LH + I++ D+K N+LLD + ++DFGL++ A +
Sbjct: 165 VGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVA-------DET 214
Query: 853 SSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+ GT+ Y+ P + G S D +SLGV++ E+ T P
Sbjct: 215 ERAYDFCGTIEYMAPDIVR----------GGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 50/248 (20%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 729 VLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
++ + +H N++ ++ C+ G ++ EY G L +L + + L
Sbjct: 102 IMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKSRV-----LETD 151
Query: 788 QRLNIAIDMASAIEYLHHHCQPP----------IVHGDLKPSNVLLDHDMVAHVSDFGLA 837
IA AS + LH Q +H D+ NVLL + VA + DFGLA
Sbjct: 152 PAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211
Query: 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897
R I Y+ GN + E +V DV+S G
Sbjct: 212 R------------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG 253
Query: 898 VMLLEMFT 905
++L E+F+
Sbjct: 254 ILLWEIFS 261
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 104/247 (42%), Gaps = 48/247 (19%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 729 VLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEV------ 781
++ + +H N++ ++ C+ G ++ EY G L +L + + E
Sbjct: 102 IMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 782 --CDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838
LS L+ + +A + +L +C +H D+ NVLL + VA + DFGLAR
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFGLAR 212
Query: 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898
I Y+ GN + E +V DV+S G+
Sbjct: 213 ------------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGI 254
Query: 899 MLLEMFT 905
+L E+F+
Sbjct: 255 LLWEIFS 261
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.9 bits (102), Expect = 5e-04, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 17/153 (11%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITV 744
+G+G++G V + VAVKI+++ + + + E+ N H N++K
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-EICINAMLNHENVVKFYG- 72
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 73 ----HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH 122
Query: 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 123 ---GIGITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 91/223 (40%), Gaps = 45/223 (20%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVA------ECEVLRNTRHRNLIK 740
+G G F V K G A K + Q A + V E +LR H N+I
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
+ V ++ L+ E + G L ++L Q E S I+++ +
Sbjct: 80 LHDV-----YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI------LDGV 128
Query: 801 EYLHHHCQPPIVHGDLKPSNV-LLDHDM-VAHVS--DFGLARFLFARPFDTSMETQSSSI 856
YLH I H DLKP N+ LLD ++ + H+ DFGLA +E
Sbjct: 129 NYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH---------EIEDGVEFK 176
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
I GT +V P +++N L G EA D++S+GV+
Sbjct: 177 NIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVI 207
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 43.5 bits (101), Expect = 5e-04, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 83 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR + P
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP-- 193
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 194 DXVRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 236
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 43.5 bits (101), Expect = 6e-04, Method: Composition-based stats.
Identities = 57/239 (23%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 91
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ G +V E+ + G+L +L + PE L+L
Sbjct: 92 NVVNLLGACTK---PGGPLMVIV-EFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 147
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR + P
Sbjct: 148 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP-- 202
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 203 DXVRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 245
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 31/226 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N + IG GSFG +Y G G VA+K+ + K E ++ + +
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVG 64
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
I I C + D+ +V E + SLE+ + + + SL L +A M S
Sbjct: 65 IPTIRWCGA----EGDYNVMVMELL-GPSLEDLFNFCSRK-----FSLKTVLLLADQMIS 114
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
IEY+H +H D+KP N L+ + ++ DFGL A+ + + Q
Sbjct: 115 RIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL-----AKKYRDARTHQH-- 164
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ Y N+ + +G E S D+ SLG +L+
Sbjct: 165 ------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 204
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 31/226 (13%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N + IG GSFG +Y G G VA+K+ + K E ++ + +
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHP--QLHIESKIYKMMQGGVG 66
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
I I C + D+ +V E + SLE+ + + + SL L +A M S
Sbjct: 67 IPTIRWCGA----EGDYNVMVMELL-GPSLEDLFNFCSRK-----FSLKTVLLLADQMIS 116
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
IEY+H +H D+KP N L+ + ++ DFGL A+ + + Q
Sbjct: 117 RIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL-----AKKYRDARTHQH-- 166
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ Y N+ + +G E S D+ SLG +L+
Sbjct: 167 ------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 93/233 (39%), Gaps = 53/233 (22%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCS 746
+G+GSF K + ++ AVKI++ + + + ++ H N++K+ V
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEG--HPNIVKLHEV-- 74
Query: 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH 806
F LV E + G L E + + E + S I R + SA+ ++H
Sbjct: 75 ---FHDQLHTFLVMELLNGGELFERIKKKKHFSET-EASYIMR-----KLVSAVSHMH-- 123
Query: 807 CQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVG 863
+VH DLKP N+L + ++ + DFG AR
Sbjct: 124 -DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARL------------------------ 158
Query: 864 YVPPGNIAKMLNLPC--LEYGMGSEASVTG-----DVYSLGVMLLEMFTRRRP 909
PP N + L PC L Y + G D++SLGV+L M + + P
Sbjct: 159 -KPPDN--QPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFV-AECEVLRNTRH 735
+F +IG+GS+ V L + A+K++ L+ +V E V +
Sbjct: 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 68
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ V EY+ G L + + PE + +
Sbjct: 69 HPFLVGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAE 118
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
++ A+ YLH I++ DLK NVLLD + ++D+G+ + RP DT+
Sbjct: 119 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSX----- 169
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
GT Y+ P E G + + D ++LGV++ EM R P + +
Sbjct: 170 --FCGTPNYIAP------------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 213
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 43.1 bits (100), Expect = 8e-04, Method: Composition-based stats.
Identities = 56/239 (23%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 687 IGQGSFGSVYKG-ILGENGT----FVAVKILNLMQKGAL----KSFVAECEVLRNT-RHR 736
+G+G+FG V + G + T VAVK+L ++GA ++ ++E ++L + H
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKML---KEGATHSEHRALMSELKILIHIGHHL 82
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCD---LSL 786
N++ ++ C+ K ++ E+ + G+L +L + PE L+L
Sbjct: 83 NVVNLLGACT----KPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTL 138
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846
+ + +A +E+L +H DL N+LL V + DFGLAR + P
Sbjct: 139 EHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDP-- 193
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
+ + + +K ++ P I + ++ DV+S GV+L E+F+
Sbjct: 194 DXVRKGDARLPLK----WMAPETIFDRV------------YTIQSDVWSFGVLLWEIFS 236
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFV-AECEVLRNTRH 735
+F +IG+GS+ V L + A+K++ L+ +V E V +
Sbjct: 5 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 64
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ V EY+ G L + + PE + +
Sbjct: 65 HPFLVGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAE 114
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
++ A+ YLH I++ DLK NVLLD + ++D+G+ + RP DT+
Sbjct: 115 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTSX----- 165
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
GT Y+ P E G + + D ++LGV++ EM R P + +
Sbjct: 166 --FCGTPNYIAP------------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 209
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.1 bits (100), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 43/251 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N V VKIL ++K +K V E LR N+
Sbjct: 38 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGG--TNI 95
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IK+I K ALV+EY+ N ++ L+Q ++ +I M
Sbjct: 96 IKLIDTVKDPVSKTP---ALVFEYINNTDFKQ-LYQ-----------ILTDFDIRFYMYE 140
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLF-ARPFDTSMETQSSSI 856
++ L + I+H D+KP NV++DH + D+GLA F A+ ++ + +S
Sbjct: 141 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV----ASR 196
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
KG +++ +Y + D++SLG ML M RR P F G
Sbjct: 197 YFKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP---FFHG 236
Query: 917 GLTLHEFCKMA 927
+ ++A
Sbjct: 237 QDNYDQLVRIA 247
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809
F+ DF +V E + SL E LH+ + R I ++YLH++
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 810 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGN 869
++H DLK N+ L+ DM + DFGLA + FD + + GT Y+ P
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKD-----LCGTPNYIAPEV 213
Query: 870 IAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCM 913
+ K S D++SLG +L + + P T+C+
Sbjct: 214 LCK------------KGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809
F+ DF +V E + SL E LH+ + R I ++YLH++
Sbjct: 95 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 145
Query: 810 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGN 869
++H DLK N+ L+ DM + DFGLA + FD + + GT Y+ P
Sbjct: 146 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKD-----LCGTPNYIAPEV 197
Query: 870 IAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCM 913
+ K S D++SLG +L + + P T+C+
Sbjct: 198 LCK------------KGHSFEVDIWSLGCILYTLLVGKPPFETSCL 231
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 97/238 (40%), Gaps = 45/238 (18%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVL-RNTRHR 736
T+ + IG GS+ + I AVKI++ ++ + E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTE----EIEILLRYGQHP 76
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQRLNIAID 795
N+I + V + + +V E M+ G L ++ L Q S + +
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELMKGGELLDKILRQKF-------FSEREASAVLFT 124
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLARFLFARPFDTSMET 851
+ +EYLH +VH DLKPSN+L + + DFG A+ L A
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN------- 174
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
G+ T P A + LE G +A+ D++SLGV+L M T P
Sbjct: 175 -----GLLMT-----PCYTANFVAPEVLER-QGYDAAC--DIWSLGVLLYTMLTGYTP 219
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 66/174 (37%), Gaps = 32/174 (18%)
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
++ + +A +E+L +H DL N+LL + V + DFGLAR ++ P
Sbjct: 202 ISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKNP----- 253
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
YV G+ L E S DV+S GV+L E+F+
Sbjct: 254 -------------DYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSL--- 297
Query: 910 TNCMFQGGLTLHEFC-------KMALPEKVMETVDPSLLLAW-SDGRRRAKVEE 955
+ G +FC +M PE + +L W D + R + E
Sbjct: 298 GGSPYPGVQMDEDFCSRLREGMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAE 351
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFV-AECEVLRNTRH 735
+F +IG+GS+ V L + A+K++ L+ +V E V +
Sbjct: 20 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN 79
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ V EY+ G L + + PE + +
Sbjct: 80 HPFLVGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAE 129
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
++ A+ YLH I++ DLK NVLLD + ++D+G+ + RP DT+
Sbjct: 130 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTS------ 179
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
GT Y+ P E G + + D ++LGV++ EM R P + +
Sbjct: 180 -XFCGTPNYIAP------------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 224
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 52/234 (22%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSF---VAECEVLRNTRH 735
++F +G GSFG V E G A+KIL+ + LK + E +L+
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 101
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN---- 791
L K+ FK +V EY G + L I R
Sbjct: 102 PFLTKL-----EFSFKDNSNLYMVMEYAPGGEM------------FSHLRRIGRFXEPHA 144
Query: 792 --IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849
A + EYLH +++ DLKP N+++D V+DFG A+
Sbjct: 145 RFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----------- 190
Query: 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+ + + GT Y+ P I G +V D ++LGV++ EM
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIIL----------SKGYNKAV--DWWALGVLIYEM 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 105/250 (42%), Gaps = 52/250 (20%)
Query: 680 EFSSSNM-----IGQGSFGSVYK----GILGENGTF-VAVKILNLMQKGALK-SFVAECE 728
EF +N+ +G G+FG V + G+ E+ VAVK+L K + ++E +
Sbjct: 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELK 101
Query: 729 VLRNT-RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLE-----------EWLHQSN 776
++ + +H N++ ++ C+ G ++ EY G L E+ + +
Sbjct: 102 IMSHLGQHENIVNLLGACTH----GGPV-LVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 777 GQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835
PE LS L+ + +A + +L +C +H D+ NVLL + VA + DFG
Sbjct: 157 HNPEE-QLSSRDLLHFSSQVAQGMAFLASKNC----IHRDVAARNVLLTNGHVAKIGDFG 211
Query: 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895
LAR I Y+ GN + E +V DV+S
Sbjct: 212 LAR------------------DIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWS 253
Query: 896 LGVMLLEMFT 905
G++L E+F+
Sbjct: 254 YGILLWEIFS 263
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 66/152 (43%), Gaps = 15/152 (9%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVC 745
+G+G+ G V + VAVKI+++ + ++ E + + H N++K
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG-- 71
Query: 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH 805
+ + + L EY G L + + G PE +L MA + YLH
Sbjct: 72 ---HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQL-----MAGVV-YLH- 121
Query: 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837
I H D+KP N+LLD +SDFGLA
Sbjct: 122 --GIGITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809
F+ DF +V E + SL E LH+ + R I ++YLH++
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 810 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGN 869
++H DLK N+ L+ DM + DFGLA + FD + + GT Y+ P
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKT-----LCGTPNYIAPEV 213
Query: 870 IAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCM 913
+ K S D++SLG +L + + P T+C+
Sbjct: 214 LCK------------KGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 31/166 (18%)
Query: 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809
F+ DF +V E + SL E LH+ + R I ++YLH++
Sbjct: 111 FEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI-----QGVQYLHNN--- 161
Query: 810 PIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGN 869
++H DLK N+ L+ DM + DFGLA + FD + + GT Y+ P
Sbjct: 162 RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI---EFDGERKKX-----LCGTPNYIAPEV 213
Query: 870 IAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCM 913
+ K S D++SLG +L + + P T+C+
Sbjct: 214 LCK------------KGHSFEVDIWSLGCILYTLLVGKPPFETSCL 247
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 35/228 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N++ IG GSFG +Y G +G VA+K+ + K ++ ++ +
Sbjct: 9 NKYRLGRKIGSGSFGDIYLGANIASGEEVAIKLECVKTK--------HPQLHIESKFYKM 60
Query: 739 IKIITVCSSIDFKGA--DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
++ SI + GA D+ +V E + SLE+ + + + SL L +A M
Sbjct: 61 MQGGVGIPSIKWCGAEGDYNVMVMELL-GPSLEDLFNFCSRK-----FSLKTVLLLADQM 114
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDFGLARFLFARPFDTSMETQS 853
S IEY+H +H D+KP N L+ + ++ DFGL A+ + + Q
Sbjct: 115 ISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL-----AKKYRDARTHQH 166
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901
+ Y N+ + +G E S D+ SLG +L+
Sbjct: 167 --------IPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLM 206
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
L+L + + +A +E+L +H DL N+LL V + DFGLAR ++
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P YV G+ L E ++ DV+S GV+L E+
Sbjct: 245 P------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 286
Query: 904 FT 905
F+
Sbjct: 287 FS 288
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 43/251 (17%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N V VKIL ++K +K V E LR N+
Sbjct: 43 DDYQLVRKLGRGKYSEVFEAINITNNERVVVKILKPVKKKKIKREVKILENLRGG--TNI 100
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IK+I K ALV+EY+ N ++ L+Q ++ +I M
Sbjct: 101 IKLIDTVKDPVSKTP---ALVFEYINNTDFKQ-LYQ-----------ILTDFDIRFYMYE 145
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLF-ARPFDTSMETQSSSI 856
++ L + I+H D+KP NV++DH + D+GLA F A+ ++ + +S
Sbjct: 146 LLKALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRV----ASR 201
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916
KG +++ +Y + D++SLG ML M RR P F G
Sbjct: 202 YFKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRREP---FFHG 241
Query: 917 GLTLHEFCKMA 927
+ ++A
Sbjct: 242 QDNYDQLVRIA 252
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
L+L + + +A +E+L +H DL N+LL V + DFGLAR ++
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P YV G+ L E ++ DV+S GV+L E+
Sbjct: 247 P------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 288
Query: 904 FT 905
F+
Sbjct: 289 FS 290
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 81/209 (38%), Gaps = 49/209 (23%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN-----LMQKGALKSFVAECE 728
L E ++ IGQGS+G V I + A+KI+N + ++ E
Sbjct: 21 LLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVR 80
Query: 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEE----WLHQSNGQ------ 778
+++ H N+ ++ V ++ + LV E G L + ++ S G+
Sbjct: 81 LMKKLHHPNIARLYEV-----YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVV 135
Query: 779 -PEVC-------------------DLSLIQRL----NIAIDMASAIEYLHHHCQPPIVHG 814
++C L +QR NI + SA+ YLH+ I H
Sbjct: 136 KTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQ---GICHR 192
Query: 815 DLKPSNVLLDHDMVAHVS--DFGLARFLF 841
D+KP N L + + DFGL++ +
Sbjct: 193 DIKPENFLFSTNKSFEIKLVDFGLSKEFY 221
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 95/238 (39%), Gaps = 36/238 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFV-AECEVLRNTRH 735
+F +IG+GS+ V L + A++++ L+ +V E V +
Sbjct: 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN 111
Query: 736 RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795
+ + C F+ V EY+ G L + + PE + +
Sbjct: 112 HPFLVGLHSC----FQTESRLFFVIEYVNGGDLMFHMQRQRKLPEE------HARFYSAE 161
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855
++ A+ YLH I++ DLK NVLLD + ++D+G+ + RP DT+
Sbjct: 162 ISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGL-RPGDTTS------ 211
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913
GT Y+ P E G + + D ++LGV++ EM R P + +
Sbjct: 212 -TFCGTPNYIAP------------EILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
L+L + + +A +E+L +H DL N+LL V + DFGLAR ++
Sbjct: 195 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P YV G+ L E ++ DV+S GV+L E+
Sbjct: 252 P------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 293
Query: 904 FT 905
F+
Sbjct: 294 FS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 50/122 (40%), Gaps = 21/122 (17%)
Query: 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843
L+L + + +A +E+L +H DL N+LL V + DFGLAR ++
Sbjct: 197 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
P YV G+ L E ++ DV+S GV+L E+
Sbjct: 254 P------------------DYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 295
Query: 904 FT 905
F+
Sbjct: 296 FS 297
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 115/260 (44%), Gaps = 44/260 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N VAVKIL ++K +K + E LR
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGG----- 91
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IIT+ + + ALV+E++ N ++ L+Q+ + D + R + ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT-----LTDYDI--RFYM-YEILK 142
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSSIG 857
A++Y H I+H D+KP NVL+DH+ + D+GLA F + +S
Sbjct: 143 ALDYCH---SMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRY 196
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917
KG +++ +Y + D++SLG ML M R+ P F G
Sbjct: 197 FKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGH 236
Query: 918 LTLHEFCKMALPEKVMETVD 937
+ ++A KV+ T D
Sbjct: 237 DNYDQLVRIA---KVLGTED 253
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 786 LIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845
++ ++ +AI A+ YL + ++H D+KPSN+LLD + DFG++ R
Sbjct: 125 ILGKMTVAI--VKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS----GRLV 176
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
D + +S+ G Y+ P I + + DV+SLG+ L+E+ T
Sbjct: 177 DDKAKDRSA-----GCAAYMAPERIDP-------PDPTKPDYDIRADVWSLGISLVELAT 224
Query: 906 RRRP-TNC 912
+ P NC
Sbjct: 225 GQFPYKNC 232
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 25/174 (14%)
Query: 679 NEFSSSNMIGQGSFGSVYKGI---LGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH 735
N++ IG G FG +Y E VK+ + G L +E + +
Sbjct: 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKV-EYQENGPL---FSELKFYQRVAK 92
Query: 736 RNLIKIITVCSSIDFKG---------ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSL 786
++ IK +D+ G +FK Y +M L L + +GQ S
Sbjct: 93 KDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKST 152
Query: 787 IQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGLA 837
+ L + I M +EY+H + VHGD+K +N+LL + D V +++D+GL+
Sbjct: 153 V--LQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQV-YLADYGLS 200
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 55/240 (22%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI-KIITV 744
+G+G+FG V + + G + VA+KI+ + K ++ E VL+ + ++ K + V
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK-YREAARLEINVLKKIKEKDKENKFLCV 85
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
S F + +E + + E +L ++N QP L ++A + A+ +LH
Sbjct: 86 LMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQP----YPLPHVRHMAYQLCHALRFLH 140
Query: 805 HHCQPPIVHGDLKPSNVLL----------DHDMVAH---------VSDFGLARFLFARPF 845
+ + H DLKP N+L +H V+DFG A F
Sbjct: 141 ---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF------ 191
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKM-LNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
I T Y PP I ++ PC DV+S+G +L E +
Sbjct: 192 -----DHEHHTTIVATRHYRPPEVILELGWAQPC-------------DVWSIGCILFEYY 233
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 490 LKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS-IPLSLRSLKSIKELDLSC 548
L+NL+ L IS G + LE+ M GNSF+ + +P L+++ LDLS
Sbjct: 444 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 503
Query: 549 NNLSGQIPEFLENLSFLEYLNLSYNHF 575
L P +LS L+ LN+S+N+F
Sbjct: 504 CQLEQLSPTAFNSLSSLQVLNMSHNNF 530
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 172 KLEHISLARNHLTGMLPASI--GNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNG 229
+LEH+ ++L M S+ ++IYL + +SSLE + + N
Sbjct: 421 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 480
Query: 230 FTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGR 289
F N DI L NL + P +F++ S+++++++ N F + +
Sbjct: 481 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 540
Query: 290 LKNLWSLDLGINNLGSGGANDL 311
L +L LD +N++ + +L
Sbjct: 541 LNSLQVLDYSLNHIMTSKKQEL 562
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 442 KNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGN 501
+NL+ L++S A +++L GN+ LP L+NL L +S
Sbjct: 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 504
Query: 502 QFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLEN 561
Q P + L++ +M N+F + L S++ LD S N++ + L++
Sbjct: 505 QLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQH 564
Query: 562 L-SFLEYLNLSYNHF 575
S L +LNL+ N F
Sbjct: 565 FPSSLAFLNLTQNDF 579
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 538 LKSIKELDLSCNNL-SGQIPEFLENLSFLEYLNLSYN 573
LK++KEL+++ N + S ++PE+ NL+ LE+L+LS N
Sbjct: 147 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 183
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 55/240 (22%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI-KIITV 744
+G+G+FG V + + G + VA+KI+ + K ++ E VL+ + ++ K + V
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK-YREAARLEINVLKKIKEKDKENKFLCV 94
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
S F + +E + + E +L ++N QP L ++A + A+ +LH
Sbjct: 95 LMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQP----YPLPHVRHMAYQLCHALRFLH 149
Query: 805 HHCQPPIVHGDLKPSNVLL----------DHDMVAH---------VSDFGLARFLFARPF 845
+ + H DLKP N+L +H V+DFG A F
Sbjct: 150 ---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF------ 200
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKM-LNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
I T Y PP I ++ PC DV+S+G +L E +
Sbjct: 201 -----DHEHHTTIVATRHYRPPEVILELGWAQPC-------------DVWSIGCILFEYY 242
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 96/240 (40%), Gaps = 55/240 (22%)
Query: 687 IGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI-KIITV 744
+G+G+FG V + + G + VA+KI+ + K ++ E VL+ + ++ K + V
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK-YREAARLEINVLKKIKEKDKENKFLCV 117
Query: 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804
S F + +E + + E +L ++N QP L ++A + A+ +LH
Sbjct: 118 LMSDWFNFHGHMCIAFELLGKNTFE-FLKENNFQP----YPLPHVRHMAYQLCHALRFLH 172
Query: 805 HHCQPPIVHGDLKPSNVLL----------DHDMVAH---------VSDFGLARFLFARPF 845
+ + H DLKP N+L +H V+DFG A F
Sbjct: 173 ---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF------ 223
Query: 846 DTSMETQSSSIGIKGTVGYVPPGNIAKM-LNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
I T Y PP I ++ PC DV+S+G +L E +
Sbjct: 224 -----DHEHHTTIVATRHYRPPEVILELGWAQPC-------------DVWSIGCILFEYY 265
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 490 LKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS-IPLSLRSLKSIKELDLSC 548
L+NL+ L IS G + LE+ M GNSF+ + +P L+++ LDLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 549 NNLSGQIPEFLENLSFLEYLNLSYNHF 575
L P +LS L+ LN+S+N+F
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMSHNNF 506
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Query: 172 KLEHISLARNHLTGMLPASI--GNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNG 229
+LEH+ ++L M S+ ++IYL + +SSLE + + N
Sbjct: 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456
Query: 230 FTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGR 289
F N DI L NL + P +F++ S+++++++ N F + +
Sbjct: 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKC 516
Query: 290 LKNLWSLDLGINNLGSGGANDL 311
L +L LD +N++ + +L
Sbjct: 517 LNSLQVLDYSLNHIMTSKKQEL 538
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 1/102 (0%)
Query: 475 GNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLS 534
GN+ LP L+NL L +S Q P + L++ +M N+F
Sbjct: 454 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 513
Query: 535 LRSLKSIKELDLSCNNLSGQIPEFLENL-SFLEYLNLSYNHF 575
+ L S++ LD S N++ + L++ S L +LNL+ N F
Sbjct: 514 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDF 555
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 538 LKSIKELDLSCNNL-SGQIPEFLENLSFLEYLNLSYN 573
LK++KEL+++ N + S ++PE+ NL+ LE+L+LS N
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 99/234 (42%), Gaps = 21/234 (8%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
N F +G G+FG V +N + AVK++ ++K +S E ++L+ ++ ++
Sbjct: 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT-RSAKIEADILKKIQNDDI 93
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMA 797
V F D L++E + SL E + ++N + D+ L I++
Sbjct: 94 NNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLY-----CIEIL 147
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIG 857
A+ YL + + H DLKP N+LLD D S + R + ++ S G
Sbjct: 148 KALNYLR---KMSLTHTDLKPENILLD-DPYFEKSLITVRRVTDGKKIQI---YRTKSTG 200
Query: 858 IK------GTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
IK T G+I E + V+ D++S G +L E++T
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/261 (21%), Positives = 103/261 (39%), Gaps = 49/261 (18%)
Query: 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILG-ENGTFVAVKILNLMQKGALKSFVAECEV 729
Y + + +N F + IG+G+F SVY + G + + +L+ AE +
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC 72
Query: 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQR 789
L ++ + + C F+ D + Y+++ S + L+ LS +
Sbjct: 73 LTVAGGQDNVMGVKYC----FRKNDHVVIAMPYLEHESFLDILN---------SLSFQEV 119
Query: 790 LNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH-VSDFGLA----------- 837
+++ A++ +H Q IVH D+KPSN L + + + + DFGLA
Sbjct: 120 REYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELL 176
Query: 838 RFLFARPFDTSMETQSSSIGIK---------GTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888
+F+ + SI + GT G+ P + K N +
Sbjct: 177 KFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN-----------QT 225
Query: 889 VTGDVYSLGVMLLEMFTRRRP 909
D++S GV+ L + + R P
Sbjct: 226 TAIDMWSAGVIFLSLLSGRYP 246
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 109/274 (39%), Gaps = 49/274 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRN---LIKI 741
+G G++GSV VAVK L+ + + + E +L++ +H N L+ +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 742 ITVCSSIDFKGADF-KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI 800
T +SI+ DF + + + L + E + Q L +
Sbjct: 96 FTPATSIE----DFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLR-------GL 144
Query: 801 EYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860
+Y+H I+H DLKPSNV ++ D + DFGLAR + G
Sbjct: 145 KYIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----------QADEEMTGYVA 190
Query: 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920
T Y P MLN + Y T D++S+G ++ E+ + +F G +
Sbjct: 191 TRWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLQGK----ALFPGSDYI 235
Query: 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE 954
+ ++ +V+ T P +L S R ++
Sbjct: 236 DQLKRIM---EVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 108/309 (34%), Gaps = 56/309 (18%)
Query: 595 GNGKLCGGSNELHLPSCPSKRSRKSTVLRLGK-VGIPMIVSCLILSTCFIIVYARRRRSK 653
G K C + + +P KR R V GK V VS + F I
Sbjct: 89 GQSKPCEPTAPVLIPGDERKRRRGYDVDEQGKIVRGKGTVSSNYDNYVFDI--------- 139
Query: 654 QESSISVPMEQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN 713
+QY+P + + + +G G+FG V++ G A K +
Sbjct: 140 --------WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVM 191
Query: 714 LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLH 773
+ ++ E + + RH L+ + F+ + ++YE+M G L E
Sbjct: 192 TPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGELFE--- 243
Query: 774 QSNGQPEVCDLSLIQRLNIAID-MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832
+V D + A++ M + L H + VH DLKP N++ +
Sbjct: 244 ------KVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELK 297
Query: 833 --DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT 890
DFGL L + QS + GT + P E G
Sbjct: 298 LIDFGLTAHLDPK--------QSVKV-TTGTAEFAAP------------EVAEGKPVGYY 336
Query: 891 GDVYSLGVM 899
D++S+GV+
Sbjct: 337 TDMWSVGVL 345
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 490 LKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS-IPLSLRSLKSIKELDLSC 548
L+NL+ L IS G + LE+ M GNSF+ + +P L+++ LDLS
Sbjct: 420 LRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQ 479
Query: 549 NNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQ 592
L P +LS L+ LN++ N VP G+F T +Q
Sbjct: 480 CQLEQLSPTAFNSLSSLQVLNMASNQLKS-VP-DGIFDRLTSLQ 521
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 172 KLEHISLARNHLTGMLPASI--GNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNG 229
+LEH+ ++L M S+ ++IYL + +SSLE + + N
Sbjct: 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 456
Query: 230 FTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGR 289
F N DI L NL + P +F++ S+++++++ N IF R
Sbjct: 457 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDR 516
Query: 290 LKNLWSLDLGIN 301
L +L + L N
Sbjct: 517 LTSLQKIWLHTN 528
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%), Gaps = 1/37 (2%)
Query: 538 LKSIKELDLSCNNL-SGQIPEFLENLSFLEYLNLSYN 573
LK++KEL+++ N + S ++PE+ NL+ LE+L+LS N
Sbjct: 123 LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLR-NTRHRN 737
+ + ++IG+GSFG V K +VA+KI+ +K L E +L +H
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMNKHDT 112
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
+K V F + LV+E M + +L + L +N + +SL A M
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFR----GVSLNLTRKFAQQMC 167
Query: 798 SAIEYLHHHCQPP--IVHGDLKPSNVLL--DHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+A+ +L P I+H DLKP N+LL + DFG + L R +
Sbjct: 168 TALLFL---ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQ---- 220
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ P + GM + ++ D++SLG +L+EM T
Sbjct: 221 -----------------SRFYRSPEVLLGMPYDLAI--DMWSLGCILVEMHT 253
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 16/111 (14%)
Query: 472 LDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI 531
LDL HLNG LP + + +L L ++ N F + L +++GN + +
Sbjct: 282 LDLTAAHLNG-LPSGIEGMNSLKKLVLNANSFDQLCQINAASFPSLRDLYIKGNMRKLDL 340
Query: 532 -PLSLRSLKSIKELDLS--------CNNLSGQIPEFLENLSFLEYLNLSYN 573
L L+++++LDLS C NL L+NL L+YLNLSYN
Sbjct: 341 GTRCLEKLENLQKLDLSHSDIEASDCCNLQ------LKNLRHLQYLNLSYN 385
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 7/223 (3%)
Query: 388 REIGQLRNLQAIGLSSNFLQGNIPSSL--GNLTLMTDLFLSSNHLQGNIPPSLGNCKNLV 445
R + +L NLQ + LS + ++ + +L NL + L LS N G + C L
Sbjct: 343 RCLEKLENLQKLDLSHSDIEASDCCNLQLKNLRHLQYLNLSYNEPLGLEDQAFKECPQLE 402
Query: 446 SLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQF-S 504
L+++ L P L R L+L + L+ S + L++L L + GN F
Sbjct: 403 LLDVAFTHLHVKAPHSPFQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQD 462
Query: 505 GEIPVT--LTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENL 562
G I T L LEI + + + L+++ LDLS N+L+G + L +L
Sbjct: 463 GSISKTNLLQMVGSLEILILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGDSMDALSHL 522
Query: 563 SFLEYLNLSYNHFDGEVPT-KGVFSNKTRVQLTGNGKLCGGSN 604
L YLN++ N+ P S ++ + L+ N C SN
Sbjct: 523 KGL-YLNMASNNIRIIPPHLLPALSQQSIINLSHNPLDCTCSN 564
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 40.4 bits (93), Expect = 0.005, Method: Composition-based stats.
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 12/158 (7%)
Query: 437 SLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEV-GNLKNLVA 495
S N KN S++ S KL A+P I T + LDL +N L+ SLP + L L
Sbjct: 13 SCNNNKN--SVDCSSKKLT-AIPSNIPADT---KKLDLQSNKLS-SLPSKAFHRLTKLRL 65
Query: 496 LYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSL-RSLKSIKELDLSCNNLSGQ 554
LY++ N+ LE + N + ++P+ + L ++ EL L N L
Sbjct: 66 LYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALPIGVFDQLVNLAELRLDRNQLKSL 124
Query: 555 IPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQ 592
P ++L+ L YL+L YN +P KGVF T ++
Sbjct: 125 PPRVFDSLTKLTYLSLGYNELQ-SLP-KGVFDKLTSLK 160
Score = 38.1 bits (87), Expect = 0.024, Method: Composition-based stats.
Identities = 58/219 (26%), Positives = 89/219 (40%), Gaps = 39/219 (17%)
Query: 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPS-SLGNLTLMTDLFLSSNHLQGNIPP 436
+ + NIP + +L +LQ+ LSS +PS + LT + L+L+ N LQ
Sbjct: 27 KLTAIPSNIPADTKKL-DLQSNKLSS------LPSKAFHRLTKLRLLYLNDNKLQTLPAG 79
Query: 437 SLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEV-GNLKNLVA 495
KNL +L ++DNKL +LP+ V L NL
Sbjct: 80 IFKELKNLETLWVTDNKL--------------------------QALPIGVFDQLVNLAE 113
Query: 496 LYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQI 555
L + NQ P T L + N + L S+KEL L N L ++
Sbjct: 114 LRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLK-RV 172
Query: 556 PE-FLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQL 593
PE + L+ L+ L L N VP +G F + ++++
Sbjct: 173 PEGAFDKLTELKTLKLDNNQLK-RVP-EGAFDSLEKLKM 209
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 8/148 (5%)
Query: 465 ITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPV-TLTGCTGLEIFHMQ 523
I T ++ L L +N + P +L NL LY+ NQ G +PV T L + +
Sbjct: 38 IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQLTVLDLG 96
Query: 524 GNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKG 583
N L +KEL + CN L+ ++P +E L+ L +L L N +P G
Sbjct: 97 TNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKS-IP-HG 153
Query: 584 VF---SNKTRVQLTGNGKLCGGSNELHL 608
F S+ T L GN C + ++L
Sbjct: 154 AFDRLSSLTHAYLFGNPWDCECRDIMYL 181
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 36/175 (20%)
Query: 180 RNHLTGMLPASI-GNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDI 238
R+ +PA I N I+YLH +NQ + P ++ +L+ + L N G LP +
Sbjct: 27 RSKRHASVPAGIPTNAQILYLH--DNQITKLEPGVFDSLINLKELYLGSNQL-GALP--V 81
Query: 239 GVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDL 298
GV F + + + ++DL N T S +F RL +L L +
Sbjct: 82 GV----------------------FDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119
Query: 299 GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYM 353
N L + ++ +T LT+ LA ++N+L + PH + +++T Y+
Sbjct: 120 CCNKL-TELPRGIERLTHLTH------LALDQNQLKSI-PHGAFDRLSSLTHAYL 166
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 90/223 (40%), Gaps = 40/223 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRN---LIKI 741
+G G++GSV VAVK L+ + + + E +L++ +H N L+ +
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 87
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
T +SI+ DF + G+ N + LS + + ++
Sbjct: 88 FTPATSIE----DFSEVYLVTTLMGA------DLNNIVKCQALSDEHVQFLVYQLLRGLK 137
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
Y+H I+H DLKPSNV ++ D + DFGLAR + G T
Sbjct: 138 YIH---SAGIIHRDLKPSNVAVNEDCELRILDFGLAR-----------QADEEMTGYVAT 183
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904
Y P MLN + Y T D++S+G ++ E+
Sbjct: 184 RWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELL 215
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 89/240 (37%), Gaps = 38/240 (15%)
Query: 663 EQYFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKS 722
+QY+P + + + +G G+FG V++ G A K + + ++
Sbjct: 35 KQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKET 94
Query: 723 FVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVC 782
E + + RH L+ + F+ + ++YE+M G L E +V
Sbjct: 95 VRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGGELFE---------KVA 140
Query: 783 DLSLIQRLNIAID-MASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLARF 839
D + A++ M + L H + VH DLKP N++ + DFGL
Sbjct: 141 DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAH 200
Query: 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
L + QS + GT + P E G D++S+GV+
Sbjct: 201 LDPK--------QSVKV-TTGTAEFAAP------------EVAEGKPVGYYTDMWSVGVL 239
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 109/273 (39%), Gaps = 47/273 (17%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGAL--KSFVAECEVLRNTRHRN---LIKI 741
+G G++GSV VAVK L+ + + + E +L++ +H N L+ +
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDV 95
Query: 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801
T +SI+ DF + G+ N + LS + + ++
Sbjct: 96 FTPATSIE----DFSEVYLVTTLMGA------DLNNIVKCQALSDEHVQFLVYQLLRGLK 145
Query: 802 YLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGT 861
Y+H I+H DLKPSNV ++ D + DFGLAR + G T
Sbjct: 146 YIH---SAGIIHRDLKPSNVAVNEDSELRILDFGLAR-----------QADEEMTGYVAT 191
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921
Y P MLN + Y T D++S+G ++ E+ + +F G +
Sbjct: 192 RWYRAP---EIMLN--WMHYNQ------TVDIWSVGCIMAELLQGK----ALFPGSDYID 236
Query: 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE 954
+ ++ +V+ T P +L S R ++
Sbjct: 237 QLKRIM---EVVGTPSPEVLAKISSEHARTYIQ 266
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLR-NTRHRN 737
+ + ++IG+GSFG V K +VA+KI+ +K L E +L +H
Sbjct: 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMNKHDT 112
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
+K V F + LV+E M + +L + L +N + +SL A M
Sbjct: 113 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFR----GVSLNLTRKFAQQMC 167
Query: 798 SAIEYLHHHCQPP--IVHGDLKPSNVLL--DHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+A+ +L P I+H DLKP N+LL + DFG + L R +
Sbjct: 168 TALLFL---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ---- 220
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ P + GM + ++ D++SLG +L+EM T
Sbjct: 221 -----------------SRFYRSPEVLLGMPYDLAI--DMWSLGCILVEMHT 253
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 97/232 (41%), Gaps = 37/232 (15%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLR-NTRHRN 737
+ + ++IG+GSFG V K +VA+KI+ +K L E +L +H
Sbjct: 35 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIK-NKKAFLNQAQIEVRLLELMNKHDT 93
Query: 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMA 797
+K V F + LV+E M + +L + L +N + +SL A M
Sbjct: 94 EMKYYIVHLKRHFMFRNHLCLVFE-MLSYNLYDLLRNTNFR----GVSLNLTRKFAQQMC 148
Query: 798 SAIEYLHHHCQPP--IVHGDLKPSNVLL--DHDMVAHVSDFGLARFLFARPFDTSMETQS 853
+A+ +L P I+H DLKP N+LL + DFG + L R +
Sbjct: 149 TALLFL---ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQ---- 201
Query: 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905
++ P + GM + ++ D++SLG +L+EM T
Sbjct: 202 -----------------SRFYRSPEVLLGMPYDLAI--DMWSLGCILVEMHT 234
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHR-----NLIKI 741
+G G F +V+ + FVA+K++ + ++ + E +L++ R+ N +
Sbjct: 29 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYT-ETALDEIRLLKSVRNSDPNDPNREMV 87
Query: 742 ITVCSSIDFKGAD--FKALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIAIDMA 797
+ + G + +V+E + + L +W+ +SN Q P C +IQ++ +D
Sbjct: 88 VQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLPCVKKIIQQVLQGLD-- 144
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLL 823
YLH C+ I+H D+KP N+LL
Sbjct: 145 ----YLHTKCR--IIHTDIKPENILL 164
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT- 733
S T EF IG G FGSV+K + +G A+K K L V E LR
Sbjct: 3 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 58
Query: 734 ------RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN------GQPEV 781
+H ++++ + + D + EY GSL + + ++ + E+
Sbjct: 59 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 113
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823
DL L + + Y+H +VH D+KPSN+ +
Sbjct: 114 KDLLL--------QVGRGLRYIHSMS---LVHMDIKPSNIFI 144
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT- 733
S T EF IG G FGSV+K + +G A+K K L V E LR
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 734 ------RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN------GQPEV 781
+H ++++ + + D + EY GSL + + ++ + E+
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823
DL L + + Y+H +VH D+KPSN+ +
Sbjct: 116 KDLLL--------QVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT- 733
S T EF IG G FGSV+K + +G A+K K L V E LR
Sbjct: 7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 62
Query: 734 ------RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN------GQPEV 781
+H ++++ + + D + EY GSL + + ++ + E+
Sbjct: 63 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 117
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823
DL L + + Y+H +VH D+KPSN+ +
Sbjct: 118 KDLLL--------QVGRGLRYIHSMS---LVHMDIKPSNIFI 148
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 21/156 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIIT 743
+G G+FG V++ + G K +N + K +K+ E ++ H LI +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKN---EISIMNQLHHPKLINLHD 115
Query: 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL 803
F+ L+ E++ G L + + + + +S + +N ++++
Sbjct: 116 A-----FEDKYEMVLILEFLSGGELFDRIAAEDYK-----MSEAEVINYMRQACEGLKHM 165
Query: 804 HHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLA 837
H H IVH D+KP N++ + + V DFGLA
Sbjct: 166 HEHS---IVHLDIKPENIMCETKKASSVKIIDFGLA 198
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 66/162 (40%), Gaps = 33/162 (20%)
Query: 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT- 733
S T EF IG G FGSV+K + +G A+K K L V E LR
Sbjct: 5 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVY 60
Query: 734 ------RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN------GQPEV 781
+H ++++ + + D + EY GSL + + ++ + E+
Sbjct: 61 AHAVLGQHSHVVRYFSAWAE-----DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAEL 115
Query: 782 CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823
DL L + + Y+H +VH D+KPSN+ +
Sbjct: 116 KDLLL--------QVGRGLRYIHSMS---LVHMDIKPSNIFI 146
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 19/146 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHR-----NLIKI 741
+G G F +V+ + FVA+K++ + ++ + E +L++ R+ N +
Sbjct: 45 LGWGHFSTVWLSWDIQGKKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMV 103
Query: 742 ITVCSSIDFKGAD--FKALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIAIDMA 797
+ + G + +V+E + + L+ W+ +SN Q P C +IQ++ +D
Sbjct: 104 VQLLDDFKISGVNGTHICMVFEVLGHHLLK-WIIKSNYQGLPLPCVKKIIQQVLQGLD-- 160
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLL 823
YLH C+ I+H D+KP N+LL
Sbjct: 161 ----YLHTKCR--IIHTDIKPENILL 180
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 19/146 (13%)
Query: 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLI---KIIT 743
+G G F +V+ + FVA+K++ Q ++ + E ++L+ R + K +
Sbjct: 39 LGWGHFSTVWLCWDMQGKRFVAMKVVKSAQH-YTETALDEIKLLKCVRESDPSDPNKDMV 97
Query: 744 VCSSIDFKGADFKA----LVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIAIDMA 797
V DFK + +V+E + + L +W+ +SN Q P C S+I+++
Sbjct: 98 VQLIDDFKISGMNGIHVCMVFEVLGH-HLLKWIIKSNYQGLPVRCVKSIIRQV------L 150
Query: 798 SAIEYLHHHCQPPIVHGDLKPSNVLL 823
++YLH C+ I+H D+KP N+L+
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENILM 174
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 36/233 (15%)
Query: 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHR 736
+F+ ++G+GSFG V AVKIL ++Q ++ + E VL
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
+ + C F+ D V EY+ G L + Q V + A ++
Sbjct: 81 PFLTQLHSC----FQTMDRLYFVMEYVNGGDLMYHIQQ------VGRFKEPHAVFYAAEI 130
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
A + +L I++ DLK NV+LD + ++DFG+ + ++ ++
Sbjct: 131 AIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--------ENIWDGVTTK 179
Query: 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
GT Y+ P IA YG SV D ++ GV+L EM + P
Sbjct: 180 XFCGTPDYIAPEIIAYQ------PYG----KSV--DWWAFGVLLYEMLAGQAP 220
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 61/274 (22%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGAL---------- 720
+EL + ++ I GS+G+V G+ E G VA+K + N + G
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 721 KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE 780
K + E +L + H N++ + + + LV E M+ L + +H
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD------ 126
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHC--------QPPIVHGDLKPSNVLLDHDMVAHVS 832
QR+ I+ I+Y +H + +VH DL P N+LL + +
Sbjct: 127 -------QRIVIS---PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176
Query: 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892
DF LAR DT+ ++ + + Y P + + L D
Sbjct: 177 DFNLAR------EDTADANKTHYVTHR---WYRAPELVMQFKGFTKL-----------VD 216
Query: 893 VYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM 926
++S G ++ EMF R+ +F+G ++ K+
Sbjct: 217 MWSAGCVMAEMFNRK----ALFRGSTFYNQLNKI 246
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 90/227 (39%), Gaps = 36/227 (15%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
++G+GSFG V AVKIL ++Q ++ + E VL + +
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQL 407
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
C F+ D V EY+ G L + Q V + A ++A + +
Sbjct: 408 HSC----FQTMDRLYFVMEYVNGGDLMYHIQQ------VGRFKEPHAVFYAAEIAIGLFF 457
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTV 862
L I++ DLK NV+LD + ++DFG+ + ++ ++ GT
Sbjct: 458 LQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCK--------ENIWDGVTTKXFCGTP 506
Query: 863 GYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
Y+ P IA YG + D ++ GV+L EM + P
Sbjct: 507 DYIAPEIIAYQ------PYGK------SVDWWAFGVLLYEMLAGQAP 541
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 80/191 (41%), Gaps = 30/191 (15%)
Query: 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV-AECEVLRNTRHRNLI 739
F + +G+G+ VY+ A+K+L +K K V E VL H N+I
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVL---KKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 740 KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASA 799
K+ + F+ +LV E + G L + + + E ++++ A
Sbjct: 112 KLKEI-----FETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEA 160
Query: 800 IEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSDFGLARFLFARPFDTSMETQSSSI 856
+ YLH + IVH DLKP N+L D ++DFGL++ + E Q
Sbjct: 161 VAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIV---------EHQVLMK 208
Query: 857 GIKGTVGYVPP 867
+ GT GY P
Sbjct: 209 TVCGTPGYCAP 219
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 60/274 (21%), Positives = 107/274 (39%), Gaps = 61/274 (22%)
Query: 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVK-ILNLMQKGAL---------- 720
+EL + ++ I GS+G+V G+ E G VA+K + N + G
Sbjct: 15 AELHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLC 73
Query: 721 KSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE 780
K + E +L + H N++ + + + LV E M+ L + +H
Sbjct: 74 KRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRT-DLAQVIHD------ 126
Query: 781 VCDLSLIQRLNIAIDMASAIEYLHHHC--------QPPIVHGDLKPSNVLLDHDMVAHVS 832
QR+ I+ I+Y +H + +VH DL P N+LL + +
Sbjct: 127 -------QRIVIS---PQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC 176
Query: 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892
DF LAR DT+ ++ + + Y P + + L D
Sbjct: 177 DFNLAR------EDTADANKTHYVTHR---WYRAPELVMQFKGFTKL-----------VD 216
Query: 893 VYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM 926
++S G ++ EMF R+ +F+G ++ K+
Sbjct: 217 MWSAGCVMAEMFNRK----ALFRGSTFYNQLNKI 246
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 108 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 156
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 157 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGT 204
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K + S DV+S+G ++ + + P T+C+ + L
Sbjct: 205 PNYIAPEVLSKKGH------------SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 252
Query: 920 LHE 922
+ +
Sbjct: 253 IKK 255
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 106 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 154
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 155 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGT 202
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K + S DV+S+G ++ + + P T+C+ + L
Sbjct: 203 PNYIAPEVLSKKGH------------SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 250
Query: 920 LHE 922
+ +
Sbjct: 251 IKK 253
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 95/238 (39%), Gaps = 45/238 (18%)
Query: 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVL-RNTRHR 736
T+ + IG GS+ + I AVKI++ ++ + E E+L R +H
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTE----EIEILLRYGQHP 76
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSL-EEWLHQSNGQPEVCDLSLIQRLNIAID 795
N+I + V + + +V E + G L ++ L Q S + +
Sbjct: 77 NIITLKDV-----YDDGKYVYVVTELXKGGELLDKILRQKF-------FSEREASAVLFT 124
Query: 796 MASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLARFLFARPFDTSMET 851
+ +EYLH +VH DLKPSN+L + + DFG A+ L A
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN------- 174
Query: 852 QSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
G+ T P A + LE G +A+ D++SLGV+L T P
Sbjct: 175 -----GLLXT-----PCYTANFVAPEVLER-QGYDAAC--DIWSLGVLLYTXLTGYTP 219
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 378 EFNQLTGNIPREI-----GQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG 432
E QL+ N+ R+I L +L + L N L + L+ + +L+L +N ++
Sbjct: 62 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 121
Query: 433 NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKN 492
+ +L L+L + K + + + R+L+LG +L ++ NL
Sbjct: 122 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-----DIPNLTA 176
Query: 493 LV---ALYISGNQFSGEIPVTLTGCTGLE---IFHMQGNSFRGSIPLSLRSLKSIKELDL 546
LV L +SGN+ P + G T L + H Q + + + LKS++EL+L
Sbjct: 177 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERN---AFDDLKSLEELNL 233
Query: 547 SCNNLSGQIPEFLENLSFLEYLNLSYNHF 575
S NNL + L LE ++L++N +
Sbjct: 234 SHNNLMSLPHDLFTPLHRLERVHLNHNPW 262
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 187 LPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVT--LPN 244
+PASI ++ YL++ EN + ++ LE + L N +++G LP+
Sbjct: 29 VPASIP-VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRK---IEVGAFNGLPS 84
Query: 245 LQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLG----- 299
L + DN + ++F S + + L N S F R+ +L LDLG
Sbjct: 85 LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRL 144
Query: 300 --INNLGSGGANDLDFVTI----------LTNCSKLKVLAFEENRLGGVLPHSIANLSTT 347
I+ G +L ++ + LT +L+ L NRL + P S L T+
Sbjct: 145 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLDLIRPGSFQGL-TS 203
Query: 348 MTDIYMGVNQIS 359
+ +++ Q++
Sbjct: 204 LRKLWLMHAQVA 215
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 125/321 (38%), Gaps = 40/321 (12%)
Query: 267 SNIEIIDLPINYFTGKVSIIFGRLK--NLWSLDLGINNLGSGGANDLDFVTILTNCSKLK 324
++I+ + L N F LK NL LDL NNL G ++ L+
Sbjct: 222 TSIQNLSLANNQLLATSESTFSGLKWTNLTQLDLSYNNLHDVGNGSFSYL------PSLR 275
Query: 325 VLAFEENRLGGVLPHSIANLST----TMTDIYMGVNQISGTIPSXXXXXXXXXXXXXEFN 380
L+ E N + + P S LS ++ + + + P+ N
Sbjct: 276 YLSLEYNNIQRLSPRSFYGLSNLRYLSLKRAFTKQSVSLASHPNIDDFSFQWLKYLEYLN 335
Query: 381 QLTGNIPREIGQ----LRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPP 436
NIP L +L+ + LS F +SL TL + F+S H
Sbjct: 336 MDDNNIPSTKSNTFTGLVSLKYLSLSKTF------TSLQ--TLTNETFVSLAH------- 380
Query: 437 SLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLP-LEVGNLKNLVA 495
L++LNL+ N I + + R LDLG N + L E L+N+
Sbjct: 381 -----SPLLTLNLTKNH-ISKIANGTFSWLGQLRILDLGLNEIEQKLSGQEWRGLRNIFE 434
Query: 496 LYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS--IPLSLRSLKSIKELDLSCNNLSG 553
+Y+S N++ + L+ ++ + + P R L+++ LDLS NN++
Sbjct: 435 IYLSYNKYLQLSTSSFALVPSLQRLMLRRVALKNVDISPSPFRPLRNLTILDLSNNNIAN 494
Query: 554 QIPEFLENLSFLEYLNLSYNH 574
+ LE L LE L+ +N+
Sbjct: 495 INEDLLEGLENLEILDFQHNN 515
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 39/192 (20%)
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
N++K++ + K +L++EY+ N + P + D + R I ++
Sbjct: 108 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLY------PTLTDYDI--RYYI-YEL 155
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSS 855
A++Y H I+H D+KP NV++DH++ + D+GLA F + +S
Sbjct: 156 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVAS 209
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +++L +Y + D++SLG M M R+ P F
Sbjct: 210 RYFKGP---------ELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFY 249
Query: 916 GGLTLHEFCKMA 927
G + K+A
Sbjct: 250 GHDNHDQLVKIA 261
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 19/209 (9%)
Query: 378 EFNQLTGNIPREI-----GQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG 432
E QL+ N+ R+I L +L + L N L + L+ + +L+L +N ++
Sbjct: 62 EILQLSKNLVRKIEVGAFNGLPSLNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIES 121
Query: 433 NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKN 492
+ +L L+L + K + + + R+L+LG +L ++ NL
Sbjct: 122 IPSYAFNRVPSLRRLDLGELKRLEYISEAAFEGLVNLRYLNLGMCNLK-----DIPNLTA 176
Query: 493 LV---ALYISGNQFSGEIPVTLTGCTGLE---IFHMQGNSFRGSIPLSLRSLKSIKELDL 546
LV L +SGN+ P + G T L + H Q + + + LKS++EL+L
Sbjct: 177 LVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERN---AFDDLKSLEELNL 233
Query: 547 SCNNLSGQIPEFLENLSFLEYLNLSYNHF 575
S NNL + L LE ++L++N +
Sbjct: 234 SHNNLMSLPHDLFTPLHRLERVHLNHNPW 262
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 187 LPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGV--TLPN 244
+PASI ++ YL++ EN + ++ LE + L N +++G LP+
Sbjct: 29 VPASIP-VNTRYLNLQENSIQVIRTDTFKHLRHLEILQLSKNLVRK---IEVGAFNGLPS 84
Query: 245 LQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLG----- 299
L + DN + ++F S + + L N S F R+ +L LDLG
Sbjct: 85 LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKRL 144
Query: 300 -----------IN----NLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANL 344
+N NLG D+ +T L +L+ L NRL + P S L
Sbjct: 145 EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALV---RLEELELSGNRLDLIRPGSFQGL 201
Query: 345 STTMTDIYMGVNQIS 359
T++ +++ Q++
Sbjct: 202 -TSLRKLWLMHAQVA 215
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 81/192 (42%), Gaps = 39/192 (20%)
Query: 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796
N++K++ + K +L++EY+ N + P + D + R I ++
Sbjct: 89 NIVKLLDIVRDQHSKTP---SLIFEYVNNTDFKVLY------PTLTDYDI--RYYI-YEL 136
Query: 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSS 855
A++Y H I+H D+KP NV++DH++ + D+GLA F + +S
Sbjct: 137 LKALDYCHSQG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHP---GKEYNVRVAS 190
Query: 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915
KG +++L +Y + D++SLG M M R+ P F
Sbjct: 191 RYFKGP---------ELLVDLQDYDYSL--------DMWSLGCMFAGMIFRKEP---FFY 230
Query: 916 GGLTLHEFCKMA 927
G + K+A
Sbjct: 231 GHDNHDQLVKIA 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 82 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 130
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIK-GT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 131 LHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKVLCGT 178
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K + S DV+S+G ++ + + P T+C+ + L
Sbjct: 179 PNYIAPEVLSKKGH------------SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 226
Query: 920 LHE 922
+ +
Sbjct: 227 IKK 229
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.5 bits (88), Expect = 0.017, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 18/91 (19%)
Query: 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCD--LSLIQRLNIAIDMASAIEYLHHHCQPPIV 812
+ A+V E + SLE+ ++CD SL L IAI + S +EY+H ++
Sbjct: 79 YNAMVLELL-GPSLEDLF-------DLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLI 127
Query: 813 HGDLKPSNVLLDH-----DMVAHVSDFGLAR 838
+ D+KP N L+ V H+ DFGLA+
Sbjct: 128 YRDVKPENFLIGRPGNKTQQVIHIIDFGLAK 158
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 132
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ-SSSIGIKGT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGT 180
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K + S DV+S+G ++ + + P T+C+ + L
Sbjct: 181 PNYIAPEVLSKKGH------------SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
Query: 920 LHE 922
+ +
Sbjct: 229 IKK 231
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 84 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 132
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ-SSSIGIKGT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 133 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGT 180
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K S DV+S+G ++ + + P T+C+ + L
Sbjct: 181 PNYIAPEVLSK------------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 228
Query: 920 LHE 922
+ +
Sbjct: 229 IKK 231
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 99/243 (40%), Gaps = 41/243 (16%)
Query: 686 MIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKII 742
+G+G F ++ + A KI+ L++ + E + R+ H++++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802
F+ DF +V E + SL E LH+ L+ + + +Y
Sbjct: 88 GF-----FEDNDFVFVVLELCRRRSLLE-LHKRRKA-----LTEPEARYYLRQIVLGCQY 136
Query: 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQ-SSSIGIKGT 861
LH + ++H DLK N+ L+ D+ + DFGLA T +E + GT
Sbjct: 137 LHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLA---------TKVEYDGERKKTLCGT 184
Query: 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP--TNCMFQGGLT 919
Y+ P ++K + S DV+S+G ++ + + P T+C+ + L
Sbjct: 185 PNYIAPEVLSKKGH------------SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLR 232
Query: 920 LHE 922
+ +
Sbjct: 233 IKK 235
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N V VKIL ++K +K + E LR
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG----- 91
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IIT+ + + ALV+E++ N ++ L+Q+ + D + R + ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT-----LTDYDI--RFYM-YEILK 142
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSSIG 857
A++Y H I+H D+KP NV++DH+ + D+GLA F + +S
Sbjct: 143 ALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRY 196
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917
KG +++ +Y + D++SLG ML M R+ P F G
Sbjct: 197 FKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGH 236
Query: 918 LTLHEFCKMALPEKVMETVD 937
+ ++A KV+ T D
Sbjct: 237 DNYDQLVRIA---KVLGTED 253
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 38.5 bits (88), Expect = 0.021, Method: Composition-based stats.
Identities = 56/246 (22%), Positives = 100/246 (40%), Gaps = 49/246 (19%)
Query: 676 EATNEFSSSNMIGQGSFGSVYKGILGENGT-------FVAVKILNLMQKGALKSFVA-EC 727
+ + + +G G F V K + GT F+ + L+ ++G + + E
Sbjct: 9 DVEDHYEMGEELGSGQFAIVRK--CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 66
Query: 728 EVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLI 787
+LR RH N+I + + F+ L+ E + G L ++L + E +
Sbjct: 67 NILREIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFL 121
Query: 788 QRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH----VSDFGLARFLFAR 843
+++ + YLH I H DLKP N++L V + + DFG+A
Sbjct: 122 KQI------LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH----- 167
Query: 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903
+E + I GT +V P +++N L G EA D++S+GV+ +
Sbjct: 168 ----KIEAGNEFKNIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVITYIL 211
Query: 904 FTRRRP 909
+ P
Sbjct: 212 LSGASP 217
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 100/239 (41%), Gaps = 33/239 (13%)
Query: 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVL 730
L ++ +IG+G+FG V + A+K+L+ ++++ F E +++
Sbjct: 70 LQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIM 129
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
++++ C+ F+ + +V EYM G L L + PE +
Sbjct: 130 AFANSPWVVQLF--CA---FQDDKYLYMVMEYMPGGDLVN-LMSNYDVPEKWAKFYTAEV 183
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME 850
+A+D ++ ++H D+KP N+LLD ++DFG + +T M
Sbjct: 184 VLALDAIHSM---------GLIHRDVKPDNMLLDKHGHLKLADFGTC----MKMDETGMV 230
Query: 851 TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909
+++ GT Y+ P ++L + G E D +S+GV L EM P
Sbjct: 231 HCDTAV---GTPDYISP----EVLKSQGGDGYYGREC----DWWSVGVFLFEMLVGDTP 278
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N V VKIL ++K +K + E LR
Sbjct: 42 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG----- 96
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IIT+ + + ALV+E++ N ++ L+Q+ + D + R + ++
Sbjct: 97 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT-----LTDYDI--RFYM-YEILK 147
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSSIG 857
A++Y H I+H D+KP NV++DH+ + D+GLA F + +S
Sbjct: 148 ALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRY 201
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917
KG +++ +Y + D++SLG ML M R+ P F G
Sbjct: 202 FKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGH 241
Query: 918 LTLHEFCKMALPEKVMETVD 937
+ ++A KV+ T D
Sbjct: 242 DNYDQLVRIA---KVLGTED 258
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 44/260 (16%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL 738
+++ +G+G + V++ I N V VKIL ++K +K + E LR
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGG----- 91
Query: 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS 798
IIT+ + + ALV+E++ N ++ L+Q+ + D + R + ++
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQ-LYQT-----LTDYDI--RFYM-YEILK 142
Query: 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA-HVSDFGLARFLFARPFDTSMETQSSSIG 857
A++Y H I+H D+KP NV++DH+ + D+GLA F + +S
Sbjct: 143 ALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---GQEYNVRVASRY 196
Query: 858 IKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917
KG +++ +Y + D++SLG ML M R+ P F G
Sbjct: 197 FKGP---------ELLVDYQMYDYSL--------DMWSLGCMLASMIFRKEP---FFHGH 236
Query: 918 LTLHEFCKMALPEKVMETVD 937
+ ++A KV+ T D
Sbjct: 237 DNYDQLVRIA---KVLGTED 253
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 49/233 (21%)
Query: 679 NEFSSSNMIGQGSFGSVYKGILGENGT-------FVAVKILNLMQKGALKSFVA-ECEVL 730
+ + +G G F V K + GT F+ + L+ ++G + + E +L
Sbjct: 5 DHYEMGEELGSGQFAIVRK--CRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 731 RNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRL 790
R RH N+I + + F+ L+ E + G L ++L + E ++++
Sbjct: 63 REIRHPNIITLHDI-----FENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 791 NIAIDMASAIEYLHHHCQPPIVHGDLKPSNV-LLDHDM---VAHVSDFGLARFLFARPFD 846
+ YLH I H DLKP N+ LLD ++ + DFG+A
Sbjct: 118 ------LDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH-------- 160
Query: 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899
+E + I GT +V P +++N L G EA D++S+GV+
Sbjct: 161 -KIEAGNEFKNIFGTPEFVAP----EIVNYEPL----GLEA----DMWSIGVI 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,588,156
Number of Sequences: 62578
Number of extensions: 1208709
Number of successful extensions: 5914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 421
Number of HSP's that attempted gapping in prelim test: 3165
Number of HSP's gapped (non-prelim): 1676
length of query: 997
length of database: 14,973,337
effective HSP length: 108
effective length of query: 889
effective length of database: 8,214,913
effective search space: 7303057657
effective search space used: 7303057657
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)