Query 001908
Match_columns 997
No_of_seqs 902 out of 6708
Neff 9.2
Searched_HMMs 46136
Date Thu Mar 28 12:07:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001908.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001908hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 4E-116 9E-121 1122.2 60.1 900 31-990 27-953 (968)
2 PLN00113 leucine-rich repeat r 100.0 1.1E-60 2.4E-65 611.4 24.8 491 98-601 69-586 (968)
3 KOG1187 Serine/threonine prote 100.0 2.7E-46 5.8E-51 415.1 26.4 289 665-989 61-353 (361)
4 KOG0581 Mitogen-activated prot 100.0 3.1E-44 6.8E-49 373.2 19.9 253 679-983 79-334 (364)
5 KOG0192 Tyrosine kinase specif 100.0 5.4E-44 1.2E-48 393.1 22.7 262 680-993 42-308 (362)
6 KOG0615 Serine/threonine prote 100.0 2.5E-44 5.4E-49 375.1 15.1 256 677-983 170-436 (475)
7 KOG0197 Tyrosine kinases [Sign 100.0 2.5E-44 5.4E-49 391.9 14.7 260 678-992 205-465 (468)
8 KOG0472 Leucine-rich repeat pr 100.0 2.9E-47 6.2E-52 393.9 -13.1 474 75-576 46-541 (565)
9 KOG0575 Polo-like serine/threo 100.0 2E-42 4.3E-47 379.9 21.2 248 679-983 18-268 (592)
10 KOG0595 Serine/threonine-prote 100.0 5.1E-42 1.1E-46 359.0 20.4 200 678-912 9-216 (429)
11 KOG0591 NIMA (never in mitosis 100.0 3E-43 6.4E-48 348.9 10.3 260 679-987 19-284 (375)
12 KOG1026 Nerve growth factor re 100.0 5.4E-43 1.2E-47 399.3 12.5 267 678-992 485-766 (774)
13 KOG0593 Predicted protein kina 100.0 3.4E-42 7.4E-47 344.8 14.9 268 679-983 2-283 (396)
14 KOG0472 Leucine-rich repeat pr 100.0 2.7E-45 5.9E-50 379.3 -8.5 477 97-599 44-541 (565)
15 KOG0592 3-phosphoinositide-dep 100.0 4.6E-41 9.9E-46 362.3 18.1 260 675-983 69-337 (604)
16 KOG0193 Serine/threonine prote 100.0 1.6E-41 3.4E-46 370.2 14.5 270 672-991 385-656 (678)
17 KOG0598 Ribosomal protein S6 k 100.0 5.2E-41 1.1E-45 349.3 17.3 245 677-977 23-270 (357)
18 KOG2052 Activin A type IB rece 100.0 4.6E-40 1E-44 346.3 19.4 279 679-991 211-506 (513)
19 KOG0661 MAPK related serine/th 100.0 9.1E-41 2E-45 354.5 13.2 271 677-984 8-291 (538)
20 KOG4194 Membrane glycoprotein 100.0 1.2E-41 2.6E-46 366.8 6.5 372 198-580 82-456 (873)
21 KOG0582 Ste20-like serine/thre 100.0 1.1E-39 2.4E-44 343.6 19.0 263 678-983 25-292 (516)
22 KOG0196 Tyrosine kinase, EPH ( 100.0 1.8E-41 3.9E-46 377.3 5.0 271 667-989 608-892 (996)
23 KOG0659 Cdk activating kinase 100.0 9.9E-40 2.1E-44 322.3 16.7 269 679-984 2-281 (318)
24 KOG0600 Cdc2-related protein k 100.0 8.1E-40 1.8E-44 349.9 17.1 275 678-983 116-399 (560)
25 KOG1095 Protein tyrosine kinas 100.0 1E-39 2.2E-44 386.3 17.4 270 679-996 692-969 (1025)
26 KOG4194 Membrane glycoprotein 100.0 7.5E-41 1.6E-45 360.7 5.7 382 205-603 71-456 (873)
27 KOG1989 ARK protein kinase fam 100.0 8.6E-39 1.9E-43 367.3 17.9 274 679-991 37-314 (738)
28 KOG0198 MEKK and related serin 100.0 1.4E-38 3E-43 338.8 18.3 262 679-987 17-279 (313)
29 KOG0578 p21-activated serine/t 100.0 1.3E-38 2.8E-43 347.2 17.0 250 679-983 273-522 (550)
30 KOG2345 Serine/threonine prote 100.0 7.9E-39 1.7E-43 312.8 12.9 281 677-988 19-300 (302)
31 KOG0616 cAMP-dependent protein 100.0 1.5E-38 3.3E-43 318.5 14.9 199 678-913 43-244 (355)
32 cd05102 PTKc_VEGFR3 Catalytic 100.0 3.5E-38 7.7E-43 355.1 19.6 269 677-991 5-337 (338)
33 KOG0597 Serine-threonine prote 100.0 1.9E-38 4.2E-43 341.1 15.9 247 679-983 2-250 (808)
34 KOG4278 Protein tyrosine kinas 100.0 1.8E-38 3.8E-43 343.1 14.8 265 672-990 260-525 (1157)
35 KOG0605 NDR and related serine 100.0 7.4E-38 1.6E-42 338.3 19.1 260 677-982 139-443 (550)
36 KOG0585 Ca2+/calmodulin-depend 100.0 8.8E-38 1.9E-42 331.1 18.6 266 676-985 94-373 (576)
37 KOG3653 Transforming growth fa 100.0 2.6E-38 5.7E-43 335.6 14.5 279 678-992 209-507 (534)
38 KOG0660 Mitogen-activated prot 100.0 3.1E-38 6.7E-43 327.0 14.6 278 675-983 18-309 (359)
39 KOG0588 Serine/threonine prote 100.0 6.5E-38 1.4E-42 344.5 16.9 247 680-984 13-263 (786)
40 KOG4721 Serine/threonine prote 100.0 1.7E-38 3.6E-43 341.0 11.9 246 682-992 127-372 (904)
41 KOG0201 Serine/threonine prote 100.0 8.4E-39 1.8E-43 337.3 8.7 249 679-983 13-262 (467)
42 KOG4257 Focal adhesion tyrosin 100.0 1.3E-37 2.8E-42 337.5 16.8 262 675-991 385-652 (974)
43 KOG0583 Serine/threonine prote 100.0 2.8E-37 6.1E-42 343.7 19.0 250 676-982 14-273 (370)
44 KOG0194 Protein tyrosine kinas 100.0 5.9E-38 1.3E-42 348.4 13.2 269 671-993 149-425 (474)
45 KOG0599 Phosphorylase kinase g 100.0 9.3E-38 2E-42 307.9 12.8 262 674-983 12-282 (411)
46 KOG0618 Serine/threonine phosp 100.0 5.9E-40 1.3E-44 372.7 -4.2 473 90-600 13-490 (1081)
47 KOG0611 Predicted serine/threo 100.0 3.3E-37 7.2E-42 318.8 16.0 247 679-984 53-303 (668)
48 PHA02988 hypothetical protein; 100.0 3.4E-36 7.4E-41 329.4 24.3 254 684-990 25-281 (283)
49 KOG0658 Glycogen synthase kina 100.0 7.9E-38 1.7E-42 324.6 10.6 270 680-983 25-305 (364)
50 KOG0663 Protein kinase PITSLRE 100.0 5.8E-37 1.3E-41 311.5 16.4 273 679-983 76-360 (419)
51 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.7E-36 3.7E-41 329.2 19.4 257 678-988 4-265 (266)
52 cd05104 PTKc_Kit Catalytic dom 100.0 4.1E-36 9E-41 342.0 20.7 264 678-988 34-374 (375)
53 cd05096 PTKc_DDR1 Catalytic do 100.0 5.5E-36 1.2E-40 332.1 21.1 268 678-986 4-303 (304)
54 cd05631 STKc_GRK4 Catalytic do 100.0 7.5E-36 1.6E-40 327.6 21.7 252 680-983 1-260 (285)
55 PLN00034 mitogen-activated pro 100.0 6.6E-36 1.4E-40 338.3 21.7 254 679-984 74-328 (353)
56 cd07869 STKc_PFTAIRE1 Catalyti 100.0 6E-36 1.3E-40 331.5 20.9 273 678-983 4-287 (303)
57 cd07871 STKc_PCTAIRE3 Catalyti 100.0 5.5E-36 1.2E-40 329.2 20.4 271 679-983 5-284 (288)
58 KOG0444 Cytoskeletal regulator 100.0 3.4E-39 7.3E-44 349.1 -5.4 361 75-501 8-372 (1255)
59 cd05571 STKc_PKB Catalytic dom 100.0 2.4E-36 5.2E-41 337.5 17.2 242 685-983 1-250 (323)
60 cd06649 PKc_MEK2 Catalytic dom 100.0 1.9E-35 4.1E-40 331.5 24.2 200 678-912 4-204 (331)
61 KOG0594 Protein kinase PCTAIRE 100.0 5.5E-36 1.2E-40 312.3 18.3 278 678-984 10-302 (323)
62 cd05612 STKc_PRKX_like Catalyt 100.0 2.2E-36 4.8E-41 332.7 16.3 246 679-984 1-254 (291)
63 cd05106 PTKc_CSF-1R Catalytic 100.0 4.1E-36 8.9E-41 341.6 18.9 266 677-989 36-373 (374)
64 KOG0444 Cytoskeletal regulator 100.0 2E-38 4.4E-43 343.1 -0.2 367 95-551 4-374 (1255)
65 KOG0589 Serine/threonine prote 100.0 3E-36 6.6E-41 328.1 15.9 252 679-984 4-258 (426)
66 KOG0694 Serine/threonine prote 100.0 5E-36 1.1E-40 333.0 17.7 244 677-978 366-613 (694)
67 cd05048 PTKc_Ror Catalytic Dom 100.0 1.1E-35 2.4E-40 326.1 20.5 261 679-987 5-282 (283)
68 cd07848 STKc_CDKL5 Catalytic d 100.0 1.6E-35 3.4E-40 325.7 21.5 271 679-983 1-283 (287)
69 KOG0033 Ca2+/calmodulin-depend 100.0 2E-37 4.4E-42 301.2 5.7 253 677-983 9-266 (355)
70 KOG0618 Serine/threonine phosp 100.0 8.5E-39 1.9E-43 363.3 -4.5 462 75-573 46-510 (1081)
71 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.1E-35 2.5E-40 335.0 20.9 278 680-984 1-290 (338)
72 KOG4279 Serine/threonine prote 100.0 1.6E-36 3.4E-41 332.0 13.1 250 685-983 581-831 (1226)
73 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-35 3E-40 325.6 20.5 276 679-988 4-283 (284)
74 PTZ00263 protein kinase A cata 100.0 3.2E-36 6.9E-41 337.3 15.6 245 679-983 18-270 (329)
75 cd05108 PTKc_EGFR Catalytic do 100.0 9.1E-36 2E-40 332.1 19.1 260 679-992 7-272 (316)
76 cd07862 STKc_CDK6 Catalytic do 100.0 2E-35 4.3E-40 325.4 21.4 275 679-983 1-286 (290)
77 KOG0580 Serine/threonine prote 100.0 4.2E-36 9E-41 292.6 13.3 251 677-984 20-273 (281)
78 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1E-35 2.3E-40 334.1 18.5 253 679-984 1-257 (333)
79 cd05111 PTK_HER3 Pseudokinase 100.0 2.8E-35 6E-40 322.1 21.3 262 679-994 7-274 (279)
80 KOG0610 Putative serine/threon 100.0 2.5E-35 5.5E-40 308.6 19.6 261 678-983 76-391 (459)
81 cd05585 STKc_YPK1_like Catalyt 100.0 1.2E-35 2.5E-40 330.4 18.3 239 687-982 1-245 (312)
82 cd05052 PTKc_Abl Catalytic dom 100.0 2.1E-35 4.6E-40 320.1 19.9 256 679-988 6-262 (263)
83 cd05595 STKc_PKB_beta Catalyti 100.0 1.1E-35 2.5E-40 331.9 18.1 242 685-983 1-250 (323)
84 cd05075 PTKc_Axl Catalytic dom 100.0 3.6E-35 7.8E-40 320.1 21.5 265 681-988 1-271 (272)
85 cd06650 PKc_MEK1 Catalytic dom 100.0 4.5E-35 9.9E-40 328.4 22.7 200 678-912 4-204 (333)
86 cd05035 PTKc_Axl_like Catalyti 100.0 4.4E-35 9.6E-40 319.5 21.8 265 681-988 1-272 (273)
87 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.6E-35 5.7E-40 318.1 19.6 251 679-985 4-255 (256)
88 PF07714 Pkinase_Tyr: Protein 100.0 3.8E-36 8.2E-41 324.9 12.8 251 683-985 3-259 (259)
89 cd05148 PTKc_Srm_Brk Catalytic 100.0 1.2E-35 2.5E-40 321.8 16.6 256 677-987 4-260 (261)
90 cd05054 PTKc_VEGFR Catalytic d 100.0 2.2E-35 4.7E-40 331.2 19.3 268 678-991 6-336 (337)
91 KOG1094 Discoidin domain recep 100.0 5.5E-36 1.2E-40 323.4 13.7 264 679-988 538-804 (807)
92 cd05093 PTKc_TrkB Catalytic do 100.0 4E-35 8.8E-40 322.4 21.0 267 678-992 4-283 (288)
93 cd05596 STKc_ROCK Catalytic do 100.0 2.3E-35 4.9E-40 335.3 19.4 258 677-983 41-303 (370)
94 cd05593 STKc_PKB_gamma Catalyt 100.0 1.8E-35 4E-40 330.8 18.1 243 685-984 1-251 (328)
95 PHA03212 serine/threonine kina 100.0 4.8E-35 1E-39 333.8 21.9 265 679-983 92-375 (391)
96 PTZ00036 glycogen synthase kin 100.0 2.7E-35 5.9E-40 341.3 20.0 275 678-983 65-350 (440)
97 cd05033 PTKc_EphR Catalytic do 100.0 5.1E-35 1.1E-39 317.8 20.9 258 678-988 3-265 (266)
98 cd05105 PTKc_PDGFR_alpha Catal 100.0 2.8E-35 6.1E-40 335.8 19.7 268 676-990 34-399 (400)
99 KOG0579 Ste20-like serine/thre 100.0 1.4E-36 2.9E-41 329.1 8.0 256 680-983 33-288 (1187)
100 PTZ00426 cAMP-dependent protei 100.0 1.1E-35 2.3E-40 333.6 15.6 246 678-983 29-283 (340)
101 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 4.3E-35 9.3E-40 321.5 20.0 268 681-989 6-282 (283)
102 cd05049 PTKc_Trk Catalytic dom 100.0 3.6E-35 7.8E-40 321.5 19.1 261 678-986 4-279 (280)
103 cd05109 PTKc_HER2 Catalytic do 100.0 6.2E-35 1.3E-39 319.4 20.7 261 678-992 6-272 (279)
104 cd05094 PTKc_TrkC Catalytic do 100.0 7.5E-35 1.6E-39 320.8 21.0 265 679-991 5-285 (291)
105 cd08228 STKc_Nek6 Catalytic do 100.0 1.3E-34 2.9E-39 314.7 22.7 262 679-989 2-266 (267)
106 cd05062 PTKc_IGF-1R Catalytic 100.0 3.4E-35 7.3E-40 321.2 18.0 263 676-986 3-276 (277)
107 cd06646 STKc_MAP4K5 Catalytic 100.0 6.1E-35 1.3E-39 317.3 19.9 257 679-984 9-265 (267)
108 cd05621 STKc_ROCK2 Catalytic d 100.0 4.5E-35 9.7E-40 332.4 19.3 262 674-984 38-304 (370)
109 PTZ00267 NIMA-related protein 100.0 2.9E-35 6.4E-40 345.1 18.2 254 680-983 68-322 (478)
110 cd05072 PTKc_Lyn Catalytic dom 100.0 4.6E-35 1E-39 317.1 18.4 255 678-987 5-260 (261)
111 cd05599 STKc_NDR_like Catalyti 100.0 5.7E-35 1.2E-39 332.5 19.5 259 679-983 1-295 (364)
112 cd05088 PTKc_Tie2 Catalytic do 100.0 7.7E-35 1.7E-39 322.5 19.9 264 678-992 6-284 (303)
113 cd05589 STKc_PKN Catalytic dom 100.0 3.6E-35 7.9E-40 328.2 17.2 245 681-983 1-256 (324)
114 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-34 2.3E-39 312.5 20.3 249 685-986 1-251 (252)
115 PTZ00283 serine/threonine prot 100.0 9.5E-35 2E-39 340.6 21.3 265 675-984 28-297 (496)
116 cd07863 STKc_CDK4 Catalytic do 100.0 1.9E-34 4.1E-39 317.2 22.2 273 680-983 1-284 (288)
117 KOG0584 Serine/threonine prote 100.0 1.6E-35 3.4E-40 326.0 13.3 248 682-983 43-295 (632)
118 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-34 3.1E-39 330.7 21.8 259 680-983 2-304 (381)
119 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.3E-34 2.8E-39 315.0 20.3 259 678-988 4-267 (268)
120 cd05089 PTKc_Tie1 Catalytic do 100.0 1.4E-34 3E-39 319.6 20.8 263 679-992 2-279 (297)
121 cd05588 STKc_aPKC Catalytic do 100.0 1.4E-34 3.1E-39 323.9 21.0 247 685-982 1-260 (329)
122 cd05090 PTKc_Ror1 Catalytic do 100.0 9.2E-35 2E-39 318.8 19.1 261 679-987 5-282 (283)
123 cd05068 PTKc_Frk_like Catalyti 100.0 1E-34 2.2E-39 314.5 19.2 256 677-987 4-260 (261)
124 KOG0574 STE20-like serine/thre 100.0 1.5E-36 3.3E-41 302.6 4.4 249 680-983 34-282 (502)
125 cd05618 STKc_aPKC_iota Catalyt 100.0 1.3E-34 2.8E-39 324.2 20.4 243 685-978 1-250 (329)
126 cd05594 STKc_PKB_alpha Catalyt 100.0 2.9E-35 6.3E-40 329.2 15.0 242 685-983 1-251 (325)
127 cd05628 STKc_NDR1 Catalytic do 100.0 2.1E-34 4.5E-39 327.3 22.2 208 679-912 1-238 (363)
128 cd06638 STKc_myosinIIIA Cataly 100.0 1.9E-34 4.1E-39 316.9 21.1 273 671-984 10-283 (286)
129 cd05115 PTKc_Zap-70 Catalytic 100.0 1.8E-34 3.8E-39 311.7 20.5 250 686-988 2-255 (257)
130 cd06637 STKc_TNIK Catalytic do 100.0 2.5E-34 5.3E-39 313.5 21.8 264 676-983 3-268 (272)
131 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.8E-35 1.5E-39 330.3 18.0 260 679-984 1-285 (350)
132 cd07853 STKc_NLK Catalytic dom 100.0 1.3E-34 2.8E-39 330.3 20.3 276 680-984 1-288 (372)
133 KOG1025 Epidermal growth facto 100.0 6.5E-36 1.4E-40 333.8 9.3 258 681-992 698-961 (1177)
134 cd05587 STKc_cPKC Catalytic do 100.0 6.5E-35 1.4E-39 326.2 17.3 242 680-978 1-246 (324)
135 cd05622 STKc_ROCK1 Catalytic d 100.0 1.7E-34 3.7E-39 328.0 20.8 264 671-984 35-304 (371)
136 cd05592 STKc_nPKC_theta_delta 100.0 8.4E-35 1.8E-39 323.8 17.9 239 685-980 1-243 (316)
137 cd05045 PTKc_RET Catalytic dom 100.0 1.9E-34 4.1E-39 317.5 20.5 263 680-990 1-288 (290)
138 cd05608 STKc_GRK1 Catalytic do 100.0 2.1E-34 4.5E-39 315.2 20.6 248 687-983 1-256 (280)
139 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.2E-34 4.9E-39 324.3 21.5 268 678-991 6-342 (343)
140 cd05059 PTKc_Tec_like Catalyti 100.0 1.3E-34 2.8E-39 312.7 18.5 251 679-985 4-255 (256)
141 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-34 3.4E-39 316.4 19.4 261 679-987 5-280 (280)
142 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-34 3.4E-39 322.2 19.7 237 685-978 1-241 (320)
143 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 6.4E-34 1.4E-38 309.2 24.0 262 679-989 2-266 (267)
144 cd05605 STKc_GRK4_like Catalyt 100.0 2.8E-34 6E-39 315.2 21.3 252 680-983 1-260 (285)
145 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-34 3.2E-39 321.3 19.4 271 679-983 6-285 (309)
146 cd05053 PTKc_FGFR Catalytic do 100.0 1.2E-34 2.7E-39 319.6 18.6 267 675-989 8-292 (293)
147 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.1E-34 2.3E-39 313.2 17.7 251 679-985 4-255 (256)
148 cd05607 STKc_GRK7 Catalytic do 100.0 3.3E-34 7.2E-39 313.1 21.7 248 687-985 1-251 (277)
149 PRK13184 pknD serine/threonine 100.0 2.8E-34 6E-39 343.6 22.7 272 679-990 2-292 (932)
150 cd06611 STKc_SLK_like Catalyti 100.0 3.8E-34 8.3E-39 313.4 22.0 259 678-984 4-262 (280)
151 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.7E-34 3.8E-39 329.1 20.0 268 675-989 33-400 (401)
152 cd05043 PTK_Ryk Pseudokinase d 100.0 2E-34 4.2E-39 315.7 19.6 268 677-991 4-279 (280)
153 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-34 5.3E-39 312.6 20.2 258 679-988 4-266 (267)
154 cd06645 STKc_MAP4K3 Catalytic 100.0 2.1E-34 4.5E-39 313.1 19.6 256 679-983 9-264 (267)
155 cd05591 STKc_nPKC_epsilon Cata 100.0 1.9E-34 4E-39 322.1 19.7 242 685-983 1-253 (321)
156 cd06643 STKc_SLK Catalytic dom 100.0 6.2E-34 1.3E-38 312.1 23.5 256 680-983 6-261 (282)
157 cd08529 STKc_FA2-like Catalyti 100.0 2.8E-34 6E-39 310.0 20.4 251 680-984 1-253 (256)
158 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-34 3.5E-39 317.7 18.7 268 676-991 3-281 (288)
159 cd05619 STKc_nPKC_theta Cataly 100.0 1.2E-34 2.6E-39 322.4 17.9 241 685-982 1-246 (316)
160 cd08229 STKc_Nek7 Catalytic do 100.0 5.4E-34 1.2E-38 309.9 22.3 262 679-989 2-266 (267)
161 cd07868 STKc_CDK8 Catalytic do 100.0 5.2E-34 1.1E-38 318.3 22.8 205 684-913 6-219 (317)
162 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-34 2.6E-39 323.0 17.6 242 685-983 1-251 (318)
163 cd05584 STKc_p70S6K Catalytic 100.0 3.7E-34 8E-39 319.8 21.4 242 685-983 2-255 (323)
164 cd05060 PTKc_Syk_like Catalyti 100.0 3.3E-34 7.1E-39 309.7 20.2 250 685-988 1-255 (257)
165 cd05629 STKc_NDR_like_fungal C 100.0 2.1E-34 4.6E-39 329.1 19.8 260 679-984 1-305 (377)
166 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.5E-34 5.4E-39 314.3 19.5 262 677-986 4-276 (277)
167 cd05601 STKc_CRIK Catalytic do 100.0 1.2E-34 2.5E-39 325.3 17.3 258 679-983 1-262 (330)
168 cd05116 PTKc_Syk Catalytic dom 100.0 2.6E-34 5.7E-39 310.4 19.4 248 686-987 2-254 (257)
169 cd05091 PTKc_Ror2 Catalytic do 100.0 1.7E-34 3.6E-39 316.8 18.1 260 679-986 5-281 (283)
170 cd05032 PTKc_InsR_like Catalyt 100.0 1.7E-34 3.6E-39 315.7 18.1 261 678-986 5-276 (277)
171 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.6E-34 5.6E-39 315.4 19.6 271 679-988 4-283 (284)
172 cd05071 PTKc_Src Catalytic dom 100.0 3.7E-34 7.9E-39 310.2 20.5 255 678-988 5-260 (262)
173 cd06654 STKc_PAK1 Catalytic do 100.0 3.3E-34 7.2E-39 316.3 20.5 251 679-984 20-270 (296)
174 cd05620 STKc_nPKC_delta Cataly 100.0 1.3E-34 2.8E-39 322.3 17.3 241 685-982 1-246 (316)
175 cd05065 PTKc_EphR_B Catalytic 100.0 3.2E-34 6.9E-39 312.0 19.9 260 679-988 4-268 (269)
176 cd05614 STKc_MSK2_N N-terminal 100.0 2.1E-34 4.5E-39 323.5 18.9 253 680-983 1-266 (332)
177 cd06615 PKc_MEK Catalytic doma 100.0 8.8E-34 1.9E-38 314.8 23.6 269 679-985 1-288 (308)
178 cd05597 STKc_DMPK_like Catalyt 100.0 5.3E-34 1.2E-38 319.6 21.7 207 679-912 1-210 (331)
179 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-33 2.4E-38 306.7 23.5 254 679-984 2-260 (263)
180 cd05625 STKc_LATS1 Catalytic d 100.0 3E-34 6.5E-39 328.5 20.0 207 680-912 2-250 (382)
181 cd05616 STKc_cPKC_beta Catalyt 100.0 1.6E-34 3.4E-39 323.0 16.9 242 680-978 1-246 (323)
182 cd05058 PTKc_Met_Ron Catalytic 100.0 5.4E-34 1.2E-38 309.0 20.6 256 685-990 1-261 (262)
183 cd06644 STKc_STK10_LOK Catalyt 100.0 1.3E-33 2.9E-38 311.1 24.0 257 679-983 12-268 (292)
184 cd05101 PTKc_FGFR2 Catalytic d 100.0 5E-34 1.1E-38 316.4 20.7 267 676-990 12-298 (304)
185 cd07876 STKc_JNK2 Catalytic do 100.0 5.6E-34 1.2E-38 323.5 21.3 274 677-984 19-315 (359)
186 cd05575 STKc_SGK Catalytic dom 100.0 3.4E-34 7.4E-39 320.3 19.2 238 685-979 1-242 (323)
187 KOG0667 Dual-specificity tyros 100.0 2E-34 4.4E-39 321.0 17.1 195 680-911 187-389 (586)
188 cd05598 STKc_LATS Catalytic do 100.0 2.1E-34 4.7E-39 329.1 17.9 260 679-984 1-301 (376)
189 KOG0596 Dual specificity; seri 100.0 2.1E-34 4.6E-39 310.5 16.6 265 677-983 359-626 (677)
190 cd06639 STKc_myosinIIIB Cataly 100.0 8.2E-34 1.8E-38 312.6 21.9 271 672-983 15-286 (291)
191 KOG0199 ACK and related non-re 100.0 5.2E-35 1.1E-39 321.3 12.1 254 680-985 111-369 (1039)
192 cd05098 PTKc_FGFR1 Catalytic d 100.0 4.7E-34 1E-38 317.0 19.8 267 678-992 17-303 (307)
193 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 5.2E-34 1.1E-38 308.7 19.7 254 678-987 5-259 (260)
194 cd05047 PTKc_Tie Catalytic dom 100.0 6.6E-34 1.4E-38 309.7 20.6 254 685-989 1-269 (270)
195 cd08219 STKc_Nek3 Catalytic do 100.0 3E-34 6.5E-39 309.6 17.7 251 680-984 1-252 (255)
196 cd07874 STKc_JNK3 Catalytic do 100.0 4E-34 8.7E-39 324.3 19.5 275 676-984 14-311 (355)
197 cd05069 PTKc_Yes Catalytic dom 100.0 6.2E-34 1.3E-38 308.1 19.8 253 679-987 6-259 (260)
198 cd05097 PTKc_DDR_like Catalyti 100.0 1.4E-33 3E-38 311.4 22.9 268 678-986 4-294 (295)
199 cd05082 PTKc_Csk Catalytic dom 100.0 1.5E-33 3.3E-38 304.3 22.7 249 679-987 6-255 (256)
200 cd05055 PTKc_PDGFR Catalytic d 100.0 6.5E-34 1.4E-38 314.8 20.2 262 676-988 32-301 (302)
201 cd05617 STKc_aPKC_zeta Catalyt 100.0 5.8E-34 1.3E-38 318.7 20.0 244 685-979 1-249 (327)
202 cd05099 PTKc_FGFR4 Catalytic d 100.0 7.6E-34 1.7E-38 316.3 20.8 267 678-992 11-297 (314)
203 cd05050 PTKc_Musk Catalytic do 100.0 4.6E-34 1E-38 314.1 18.9 262 678-987 4-288 (288)
204 cd05039 PTKc_Csk_like Catalyti 100.0 7.4E-34 1.6E-38 306.7 20.1 250 678-987 5-255 (256)
205 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.2E-33 2.7E-38 307.4 22.0 264 685-986 1-268 (269)
206 cd05067 PTKc_Lck_Blk Catalytic 100.0 4.7E-34 1E-38 309.1 18.5 254 678-987 5-259 (260)
207 KOG4645 MAPKKK (MAP kinase kin 100.0 8.3E-36 1.8E-40 349.4 5.0 257 679-983 1235-1493(1509)
208 KOG0577 Serine/threonine prote 100.0 4E-35 8.7E-40 316.3 9.8 248 680-983 27-277 (948)
209 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 9.7E-34 2.1E-38 310.8 21.1 274 679-988 4-283 (284)
210 KOG0607 MAP kinase-interacting 100.0 2.4E-34 5.3E-39 289.8 14.7 272 684-983 83-360 (463)
211 cd07861 STKc_CDK1_euk Catalyti 100.0 7.1E-34 1.5E-38 312.1 19.9 272 680-983 1-281 (285)
212 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-33 3E-38 311.6 22.3 267 679-986 5-295 (296)
213 cd05056 PTKc_FAK Catalytic dom 100.0 8.4E-34 1.8E-38 308.9 20.3 259 678-991 5-268 (270)
214 cd05602 STKc_SGK1 Catalytic do 100.0 5.3E-34 1.1E-38 319.0 19.1 243 685-984 1-247 (325)
215 KOG0032 Ca2+/calmodulin-depend 100.0 7E-34 1.5E-38 315.9 19.6 253 677-984 33-293 (382)
216 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-33 3E-38 311.7 21.8 268 678-986 4-295 (296)
217 cd05630 STKc_GRK6 Catalytic do 100.0 1.5E-33 3.3E-38 309.1 21.9 251 681-983 2-260 (285)
218 cd05615 STKc_cPKC_alpha Cataly 100.0 3.7E-34 8E-39 319.7 17.3 242 680-978 1-246 (323)
219 cd05042 PTKc_Aatyk Catalytic d 100.0 2.8E-33 6E-38 304.7 23.5 264 685-986 1-268 (269)
220 cd05604 STKc_SGK3 Catalytic do 100.0 4.9E-34 1.1E-38 319.3 18.0 243 685-984 1-247 (325)
221 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.2E-33 2.6E-38 312.9 20.9 271 679-983 6-285 (301)
222 cd06656 STKc_PAK3 Catalytic do 100.0 1E-33 2.3E-38 312.4 20.3 250 679-983 19-268 (297)
223 cd05057 PTKc_EGFR_like Catalyt 100.0 1.4E-33 3E-38 308.8 21.0 260 679-992 7-272 (279)
224 cd07867 STKc_CDC2L6 Catalytic 100.0 2E-33 4.3E-38 313.7 22.6 205 684-913 6-219 (317)
225 cd06655 STKc_PAK2 Catalytic do 100.0 2.1E-33 4.5E-38 309.8 22.4 250 679-983 19-268 (296)
226 cd06619 PKc_MKK5 Catalytic dom 100.0 1.8E-33 4E-38 307.8 21.7 250 679-984 1-253 (279)
227 PTZ00284 protein kinase; Provi 100.0 9.4E-34 2E-38 332.4 20.8 272 672-983 122-437 (467)
228 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.2E-33 2.5E-38 309.9 20.2 270 670-983 7-278 (282)
229 cd06608 STKc_myosinIII_like Ca 100.0 1.6E-33 3.6E-38 307.3 21.2 267 676-983 3-271 (275)
230 cd05110 PTKc_HER4 Catalytic do 100.0 9.6E-34 2.1E-38 313.8 19.4 262 678-993 6-273 (303)
231 cd05623 STKc_MRCK_alpha Cataly 100.0 1.4E-33 3E-38 316.5 20.7 261 679-984 1-266 (332)
232 PF00069 Pkinase: Protein kina 100.0 1.2E-33 2.5E-38 305.8 19.4 254 681-983 1-256 (260)
233 cd05582 STKc_RSK_N N-terminal 100.0 1.6E-34 3.6E-39 322.2 13.1 239 685-980 2-245 (318)
234 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3E-34 6.6E-39 310.1 14.8 241 685-985 1-257 (258)
235 cd05603 STKc_SGK2 Catalytic do 100.0 1E-33 2.2E-38 316.3 19.4 238 685-979 1-242 (321)
236 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 2.1E-33 4.6E-38 308.6 21.6 261 679-984 1-262 (286)
237 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-33 2.8E-38 303.6 19.5 247 685-986 1-249 (250)
238 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.9E-33 4.1E-38 306.6 20.9 240 686-985 2-273 (274)
239 PTZ00266 NIMA-related protein 100.0 6.3E-34 1.4E-38 341.6 18.4 263 675-983 9-294 (1021)
240 KOG1035 eIF-2alpha kinase GCN2 100.0 2.4E-34 5.1E-39 335.9 14.2 268 678-983 478-870 (1351)
241 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.1E-33 8.9E-38 313.2 23.9 266 677-990 10-295 (334)
242 cd06624 STKc_ASK Catalytic dom 100.0 2.5E-33 5.3E-38 304.9 21.4 261 674-983 3-264 (268)
243 cd05086 PTKc_Aatyk2 Catalytic 100.0 7E-33 1.5E-37 301.2 24.9 263 685-986 1-267 (268)
244 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-33 2.9E-38 321.1 20.0 274 677-984 22-318 (364)
245 cd06640 STKc_MST4 Catalytic do 100.0 2.7E-33 5.9E-38 306.1 21.6 249 679-984 4-253 (277)
246 cd08227 PK_STRAD_alpha Pseudok 100.0 2.8E-33 6.1E-38 313.5 22.0 277 683-983 2-306 (327)
247 cd05586 STKc_Sck1_like Catalyt 100.0 7.3E-34 1.6E-38 318.7 17.2 242 687-983 1-252 (330)
248 cd06612 STKc_MST1_2 Catalytic 100.0 2.6E-33 5.7E-38 302.3 20.8 250 679-983 3-252 (256)
249 cd05040 PTKc_Ack_like Catalyti 100.0 5.5E-33 1.2E-37 300.1 23.2 251 685-986 1-256 (257)
250 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.5E-33 5.3E-38 316.3 21.3 277 674-984 10-298 (343)
251 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.8E-33 3.9E-38 305.7 19.5 254 680-983 1-263 (267)
252 cd06613 STKc_MAP4K3_like Catal 100.0 3.6E-33 7.8E-38 302.4 21.7 257 679-983 3-259 (262)
253 cd06651 STKc_MEKK3 Catalytic d 100.0 3.6E-33 7.8E-38 303.2 21.8 254 679-983 2-260 (266)
254 KOG0604 MAP kinase-activated p 100.0 2.4E-34 5.3E-39 287.9 11.5 258 677-983 59-321 (400)
255 cd06642 STKc_STK25-YSK1 Cataly 100.0 1.1E-33 2.5E-38 309.1 18.0 249 679-984 4-253 (277)
256 cd05632 STKc_GRK5 Catalytic do 100.0 3.6E-33 7.8E-38 306.3 22.0 251 681-983 2-260 (285)
257 cd00192 PTKc Catalytic domain 100.0 2.1E-33 4.5E-38 304.0 19.8 254 685-986 1-262 (262)
258 cd05627 STKc_NDR2 Catalytic do 100.0 1.1E-33 2.3E-38 321.2 18.3 208 679-912 1-238 (360)
259 cd07839 STKc_CDK5 Catalytic do 100.0 1.4E-33 3E-38 309.7 18.5 271 680-983 1-280 (284)
260 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.6E-33 5.6E-38 305.6 20.5 265 681-988 1-272 (273)
261 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.7E-33 3.7E-38 308.9 18.8 263 678-985 4-267 (284)
262 cd05034 PTKc_Src_like Catalyti 100.0 1.9E-33 4.1E-38 304.5 18.8 256 677-987 4-260 (261)
263 cd08223 STKc_Nek4 Catalytic do 100.0 8.4E-33 1.8E-37 298.6 23.6 251 680-983 1-253 (257)
264 cd06609 STKc_MST3_like Catalyt 100.0 4.5E-33 9.8E-38 303.9 21.7 249 679-983 1-250 (274)
265 cd07849 STKc_ERK1_2_like Catal 100.0 1.2E-33 2.7E-38 317.7 17.7 279 678-984 4-292 (336)
266 cd05044 PTKc_c-ros Catalytic d 100.0 1.8E-33 4E-38 306.1 18.3 254 685-986 1-268 (269)
267 cd08221 STKc_Nek9 Catalytic do 100.0 4E-33 8.7E-38 301.0 20.8 251 680-984 1-253 (256)
268 PHA03209 serine/threonine kina 100.0 3.8E-33 8.2E-38 315.8 21.5 194 676-910 63-256 (357)
269 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.9E-33 1.7E-37 299.6 23.0 241 685-985 1-261 (262)
270 cd05112 PTKc_Itk Catalytic dom 100.0 2.3E-33 4.9E-38 302.9 18.4 252 679-986 4-256 (256)
271 cd05073 PTKc_Hck Catalytic dom 100.0 4.5E-33 9.7E-38 301.4 19.9 254 678-987 5-259 (260)
272 cd08218 STKc_Nek1 Catalytic do 100.0 8.8E-33 1.9E-37 298.3 22.2 250 680-983 1-252 (256)
273 cd06617 PKc_MKK3_6 Catalytic d 100.0 5.2E-33 1.1E-37 305.0 20.5 258 679-983 1-260 (283)
274 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.5E-33 5.3E-38 308.0 18.0 268 679-983 1-282 (286)
275 cd06605 PKc_MAPKK Catalytic do 100.0 6E-33 1.3E-37 301.3 20.5 254 679-983 1-256 (265)
276 cd05041 PTKc_Fes_like Catalyti 100.0 5.1E-33 1.1E-37 299.2 19.6 248 685-986 1-250 (251)
277 cd06652 STKc_MEKK2 Catalytic d 100.0 9.2E-33 2E-37 299.8 21.7 254 679-983 2-260 (265)
278 PHA03211 serine/threonine kina 100.0 6E-33 1.3E-37 320.0 21.2 269 678-984 168-455 (461)
279 cd07841 STKc_CDK7 Catalytic do 100.0 7.3E-33 1.6E-37 306.2 21.1 271 680-984 1-282 (298)
280 cd05624 STKc_MRCK_beta Catalyt 100.0 4.2E-33 9.2E-38 312.3 19.4 207 679-912 1-210 (331)
281 cd08217 STKc_Nek2 Catalytic do 100.0 6.4E-33 1.4E-37 300.8 20.1 254 680-983 1-261 (265)
282 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 2E-32 4.4E-37 300.8 24.1 264 679-983 1-265 (287)
283 cd06631 STKc_YSK4 Catalytic do 100.0 1.1E-32 2.4E-37 299.3 21.6 255 680-983 1-261 (265)
284 cd06658 STKc_PAK5 Catalytic do 100.0 5.5E-33 1.2E-37 305.8 19.6 250 680-984 23-272 (292)
285 cd08220 STKc_Nek8 Catalytic do 100.0 1.4E-32 3.1E-37 296.7 22.2 249 680-983 1-252 (256)
286 smart00219 TyrKc Tyrosine kina 100.0 7.1E-33 1.5E-37 299.2 19.6 252 681-985 1-258 (258)
287 PHA03207 serine/threonine kina 100.0 7.7E-33 1.7E-37 317.3 20.9 269 678-984 91-375 (392)
288 cd05046 PTK_CCK4 Pseudokinase 100.0 1.7E-32 3.8E-37 299.4 22.5 260 679-986 5-274 (275)
289 cd06917 STKc_NAK1_like Catalyt 100.0 1.6E-32 3.6E-37 300.0 22.2 250 680-984 2-255 (277)
290 KOG0612 Rho-associated, coiled 100.0 8.5E-34 1.8E-38 328.5 12.3 214 671-912 67-283 (1317)
291 cd05083 PTKc_Chk Catalytic dom 100.0 6.4E-33 1.4E-37 299.1 18.4 247 679-987 6-253 (254)
292 KOG0986 G protein-coupled rece 100.0 5.9E-34 1.3E-38 299.9 9.9 251 677-979 183-436 (591)
293 cd07837 STKc_CdkB_plant Cataly 100.0 1.6E-32 3.4E-37 303.1 21.5 277 679-983 1-290 (295)
294 cd06659 STKc_PAK6 Catalytic do 100.0 1.1E-32 2.4E-37 304.2 20.1 249 681-984 23-271 (297)
295 cd06630 STKc_MEKK1 Catalytic d 100.0 2.3E-32 5E-37 297.2 22.3 256 680-983 1-263 (268)
296 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.4E-32 3.1E-37 301.9 20.9 270 679-983 1-282 (286)
297 cd07832 STKc_CCRK Catalytic do 100.0 1.4E-32 2.9E-37 302.1 20.7 271 680-983 1-281 (286)
298 KOG4250 TANK binding protein k 100.0 2.6E-33 5.6E-38 312.2 14.9 289 681-995 15-317 (732)
299 KOG4717 Serine/threonine prote 100.0 4.3E-33 9.2E-38 296.2 15.8 248 679-983 18-269 (864)
300 cd06647 STKc_PAK_I Catalytic d 100.0 1.2E-32 2.6E-37 303.3 20.0 251 679-984 19-269 (293)
301 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-32 2.9E-37 301.9 20.2 271 680-983 1-280 (284)
302 cd05609 STKc_MAST Catalytic do 100.0 2.5E-32 5.4E-37 302.8 22.6 263 679-987 1-273 (305)
303 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.1E-32 2.4E-37 303.6 19.5 274 677-983 3-287 (291)
304 cd05574 STKc_phototropin_like 100.0 2.9E-32 6.3E-37 304.1 23.0 260 679-983 1-288 (316)
305 KOG0983 Mitogen-activated prot 100.0 1.2E-33 2.7E-38 279.2 10.5 254 680-983 93-348 (391)
306 cd06632 STKc_MEKK1_plant Catal 100.0 2.1E-32 4.6E-37 295.6 21.2 248 680-983 1-254 (258)
307 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.7E-32 3.7E-37 296.5 20.2 240 685-985 1-258 (259)
308 cd07844 STKc_PCTAIRE_like Cata 100.0 2E-32 4.3E-37 301.6 20.8 272 679-983 5-287 (291)
309 cd06648 STKc_PAK_II Catalytic 100.0 3.8E-32 8.2E-37 298.2 22.8 249 680-983 20-268 (285)
310 cd08528 STKc_Nek10 Catalytic d 100.0 3.6E-32 7.7E-37 295.9 22.4 256 680-986 1-268 (269)
311 cd06641 STKc_MST3 Catalytic do 100.0 1.7E-32 3.6E-37 299.9 19.7 249 679-984 4-253 (277)
312 cd07842 STKc_CDK8_like Catalyt 100.0 2.1E-32 4.6E-37 305.3 20.9 280 680-983 1-312 (316)
313 cd06607 STKc_TAO Catalytic dom 100.0 4.7E-32 1E-36 301.0 23.2 250 679-984 15-267 (307)
314 cd06623 PKc_MAPKK_plant_like C 100.0 5.8E-32 1.3E-36 293.2 23.3 253 679-984 1-256 (264)
315 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.9E-32 1.1E-36 295.4 22.5 257 680-983 2-268 (272)
316 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.1E-32 6.8E-37 295.9 20.8 262 679-983 1-263 (267)
317 PHA02882 putative serine/threo 100.0 3.4E-32 7.5E-37 299.8 21.4 269 678-985 11-293 (294)
318 cd05580 STKc_PKA Catalytic dom 100.0 1.6E-32 3.5E-37 302.1 18.6 244 679-982 1-252 (290)
319 cd07843 STKc_CDC2L1 Catalytic 100.0 2.4E-32 5.2E-37 301.3 20.0 273 679-983 5-289 (293)
320 cd06626 STKc_MEKK4 Catalytic d 100.0 4.2E-32 9.1E-37 294.4 21.2 258 680-983 1-260 (264)
321 cd08225 STKc_Nek5 Catalytic do 100.0 5.1E-32 1.1E-36 292.5 20.8 250 680-983 1-253 (257)
322 cd05578 STKc_Yank1 Catalytic d 100.0 3.1E-32 6.8E-37 294.4 19.0 248 680-982 1-253 (258)
323 cd07855 STKc_ERK5 Catalytic do 100.0 3.6E-32 7.7E-37 305.6 20.0 279 678-983 4-293 (334)
324 KOG0666 Cyclin C-dependent kin 100.0 5.4E-33 1.2E-37 279.4 11.8 213 677-914 22-244 (438)
325 cd07865 STKc_CDK9 Catalytic do 100.0 8E-32 1.7E-36 299.7 22.6 279 679-983 12-306 (310)
326 cd07858 STKc_TEY_MAPK_plant Ca 100.0 3E-32 6.4E-37 306.5 19.2 280 678-988 4-297 (337)
327 cd07850 STKc_JNK Catalytic dom 100.0 5E-32 1.1E-36 306.7 20.9 275 676-984 13-311 (353)
328 cd07833 STKc_CDKL Catalytic do 100.0 3.4E-32 7.3E-37 299.3 18.9 271 679-983 1-284 (288)
329 KOG0586 Serine/threonine prote 100.0 1.4E-32 3E-37 302.8 15.6 249 678-984 55-306 (596)
330 KOG0690 Serine/threonine prote 100.0 2E-33 4.3E-38 283.5 8.2 241 679-976 168-411 (516)
331 cd07835 STKc_CDK1_like Catalyt 100.0 4.5E-32 9.8E-37 297.5 19.5 270 681-983 1-279 (283)
332 cd07836 STKc_Pho85 Catalytic d 100.0 7.8E-32 1.7E-36 295.8 21.3 272 680-983 1-280 (284)
333 KOG0200 Fibroblast/platelet-de 100.0 2.8E-32 6.1E-37 325.3 18.7 270 675-990 292-581 (609)
334 cd06653 STKc_MEKK3_like_1 Cata 100.0 2E-31 4.4E-36 289.1 23.8 254 679-983 2-260 (264)
335 cd07845 STKc_CDK10 Catalytic d 100.0 7.8E-32 1.7E-36 299.5 20.8 274 678-983 6-289 (309)
336 cd05633 STKc_GRK3 Catalytic do 100.0 9.5E-32 2.1E-36 294.0 21.0 244 686-984 1-255 (279)
337 cd07852 STKc_MAPK15 Catalytic 100.0 7.8E-32 1.7E-36 303.3 20.9 279 677-984 5-295 (337)
338 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-31 2.3E-36 294.4 21.2 268 681-983 1-278 (282)
339 KOG1024 Receptor-like protein 100.0 1.5E-32 3.3E-37 283.9 13.5 275 671-993 276-560 (563)
340 PHA03390 pk1 serine/threonine- 100.0 1.7E-31 3.6E-36 290.0 21.9 251 671-983 6-261 (267)
341 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-31 3.8E-36 293.3 22.1 253 677-983 17-269 (286)
342 cd06616 PKc_MKK4 Catalytic dom 100.0 1.1E-31 2.3E-36 295.3 20.0 258 680-984 5-267 (288)
343 cd08216 PK_STRAD Pseudokinase 100.0 2E-31 4.3E-36 297.1 22.4 269 691-983 12-294 (314)
344 cd07864 STKc_CDK12 Catalytic d 100.0 1.7E-31 3.7E-36 295.9 21.6 280 676-983 4-298 (302)
345 cd07840 STKc_CDK9_like Catalyt 100.0 1.5E-31 3.3E-36 293.8 21.0 272 681-983 1-283 (287)
346 cd06657 STKc_PAK4 Catalytic do 100.0 1.6E-31 3.4E-36 294.1 20.8 246 683-983 24-269 (292)
347 cd07838 STKc_CDK4_6_like Catal 100.0 3.5E-31 7.5E-36 291.1 23.5 273 681-983 1-283 (287)
348 PLN00009 cyclin-dependent kina 100.0 1.5E-31 3.3E-36 295.0 20.5 272 679-983 2-283 (294)
349 KOG0669 Cyclin T-dependent kin 100.0 1.5E-33 3.4E-38 275.2 3.8 281 679-983 17-314 (376)
350 cd08226 PK_STRAD_beta Pseudoki 100.0 4.2E-31 9.1E-36 296.1 24.0 284 685-991 4-317 (328)
351 cd05122 PKc_STE Catalytic doma 100.0 3.5E-31 7.7E-36 284.7 22.4 250 680-983 1-250 (253)
352 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.9E-32 1.7E-36 303.6 18.0 276 679-983 5-299 (342)
353 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-31 3.6E-36 297.3 20.2 284 678-983 7-307 (311)
354 cd05579 STKc_MAST_like Catalyt 100.0 1.8E-31 3.9E-36 289.4 19.8 252 687-985 1-255 (265)
355 cd05606 STKc_beta_ARK Catalyti 100.0 3E-31 6.6E-36 289.9 21.7 243 686-983 1-254 (278)
356 cd08530 STKc_CNK2-like Catalyt 100.0 1.3E-31 2.8E-36 289.1 18.2 250 680-983 1-252 (256)
357 cd05577 STKc_GRK Catalytic dom 100.0 1.7E-31 3.7E-36 291.9 19.1 245 687-983 1-253 (277)
358 cd06606 STKc_MAPKKK Catalytic 100.0 6.5E-31 1.4E-35 283.8 23.1 254 680-983 1-256 (260)
359 cd05572 STKc_cGK_PKG Catalytic 100.0 4.4E-31 9.5E-36 286.2 21.8 243 687-983 1-251 (262)
360 cd06634 STKc_TAO2 Catalytic do 100.0 4.3E-31 9.2E-36 293.3 22.1 252 679-986 15-269 (308)
361 KOG0662 Cyclin-dependent kinas 100.0 7.3E-32 1.6E-36 250.3 13.2 266 680-983 3-282 (292)
362 cd08215 STKc_Nek Catalytic dom 100.0 2E-31 4.4E-36 287.7 18.8 252 680-983 1-254 (258)
363 cd06633 STKc_TAO3 Catalytic do 100.0 8.4E-31 1.8E-35 291.5 23.8 248 681-984 23-273 (313)
364 cd06635 STKc_TAO1 Catalytic do 100.0 8.9E-31 1.9E-35 291.9 24.0 251 680-986 26-279 (317)
365 cd07830 STKc_MAK_like Catalyti 100.0 3.4E-31 7.3E-36 290.6 20.1 268 681-983 1-279 (283)
366 PHA03210 serine/threonine kina 100.0 2.5E-31 5.4E-36 312.8 19.8 278 677-983 146-453 (501)
367 cd06627 STKc_Cdc7_like Catalyt 100.0 2.8E-31 6E-36 286.1 18.5 248 680-983 1-250 (254)
368 KOG0671 LAMMER dual specificit 100.0 3.3E-32 7.1E-37 282.8 10.2 265 678-983 88-405 (415)
369 KOG1006 Mitogen-activated prot 100.0 3.4E-33 7.3E-38 275.3 2.7 259 682-984 67-327 (361)
370 cd05611 STKc_Rim15_like Cataly 100.0 6.8E-31 1.5E-35 284.3 21.0 244 685-985 2-249 (260)
371 PTZ00024 cyclin-dependent prot 100.0 5.1E-31 1.1E-35 296.5 20.5 278 679-983 8-312 (335)
372 cd07834 STKc_MAPK Catalytic do 100.0 3E-31 6.5E-36 297.8 17.8 283 680-990 1-297 (330)
373 KOG0587 Traf2- and Nck-interac 100.0 2.5E-31 5.5E-36 301.6 16.9 266 675-983 15-281 (953)
374 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.9E-31 1.3E-35 294.4 19.8 274 673-984 4-288 (328)
375 cd06618 PKc_MKK7 Catalytic dom 100.0 7.2E-31 1.6E-35 289.9 20.1 258 678-984 14-273 (296)
376 cd07857 STKc_MPK1 Catalytic do 100.0 8.1E-31 1.8E-35 294.3 20.8 277 680-983 1-291 (332)
377 cd05581 STKc_PDK1 Catalytic do 100.0 7E-31 1.5E-35 287.4 19.6 256 679-983 1-276 (280)
378 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.4E-31 1.8E-35 295.5 20.7 280 671-984 9-300 (345)
379 cd05118 STKc_CMGC Catalytic do 100.0 1.4E-30 3E-35 285.6 21.9 269 681-983 1-279 (283)
380 cd07851 STKc_p38 Catalytic dom 100.0 5.3E-31 1.1E-35 297.0 17.5 274 676-983 12-297 (343)
381 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-30 3.3E-35 293.1 20.5 276 674-983 10-297 (343)
382 cd08222 STKc_Nek11 Catalytic d 100.0 8E-31 1.7E-35 283.7 16.8 251 680-983 1-256 (260)
383 cd05583 STKc_MSK_N N-terminal 100.0 1.4E-30 3E-35 286.5 18.7 258 680-987 1-266 (288)
384 cd05613 STKc_MSK1_N N-terminal 100.0 2.5E-30 5.3E-35 284.8 20.5 254 680-983 1-267 (290)
385 cd07879 STKc_p38delta_MAPK13 C 100.0 2.1E-30 4.5E-35 292.1 20.3 277 678-989 14-304 (342)
386 KOG1151 Tousled-like protein k 100.0 1.7E-31 3.7E-36 279.1 9.7 269 677-982 461-739 (775)
387 KOG0984 Mitogen-activated prot 100.0 3.7E-31 8.1E-36 251.7 10.2 213 678-917 45-259 (282)
388 cd07829 STKc_CDK_like Catalyti 100.0 4.7E-30 1E-34 281.3 20.0 269 681-983 1-278 (282)
389 KOG0603 Ribosomal protein S6 k 100.0 8.9E-31 1.9E-35 290.2 14.1 241 677-983 320-562 (612)
390 cd05610 STKc_MASTL Catalytic d 100.0 7.4E-30 1.6E-34 309.5 22.5 147 679-839 4-153 (669)
391 KOG0614 cGMP-dependent protein 100.0 3.3E-31 7.3E-36 282.0 7.5 243 679-977 420-665 (732)
392 cd05123 STKc_AGC Catalytic dom 100.0 1.9E-29 4.1E-34 271.1 20.8 237 687-980 1-240 (250)
393 KOG4236 Serine/threonine prote 100.0 5.4E-31 1.2E-35 280.9 8.0 195 684-912 569-768 (888)
394 cd05576 STKc_RPK118_like Catal 100.0 1.1E-29 2.4E-34 270.6 16.7 221 690-979 4-224 (237)
395 KOG0668 Casein kinase II, alph 100.0 2E-30 4.3E-35 250.1 9.7 269 677-983 36-321 (338)
396 KOG0696 Serine/threonine prote 100.0 3.9E-30 8.4E-35 267.1 10.3 203 677-913 347-553 (683)
397 PLN03225 Serine/threonine-prot 100.0 3.4E-29 7.4E-34 295.9 18.6 285 677-983 130-449 (566)
398 KOG1290 Serine/threonine prote 100.0 6.9E-29 1.5E-33 264.4 18.3 137 678-823 77-221 (590)
399 KOG0608 Warts/lats-like serine 100.0 5.4E-29 1.2E-33 271.0 13.5 212 680-917 630-878 (1034)
400 KOG0695 Serine/threonine prote 100.0 7E-29 1.5E-33 251.3 13.1 249 677-976 248-502 (593)
401 KOG0664 Nemo-like MAPK-related 100.0 4.2E-30 9.1E-35 253.6 2.5 206 679-912 53-260 (449)
402 smart00220 S_TKc Serine/Threon 100.0 7.5E-28 1.6E-32 256.9 18.3 239 691-983 1-240 (244)
403 PLN03224 probable serine/threo 100.0 8.1E-28 1.8E-32 276.4 19.3 287 677-983 143-499 (507)
404 KOG1027 Serine/threonine prote 100.0 1.1E-28 2.4E-33 279.0 8.8 247 681-982 511-765 (903)
405 KOG1345 Serine/threonine kinas 99.9 1.4E-27 3.1E-32 236.3 11.1 263 678-988 23-288 (378)
406 KOG0576 Mitogen-activated prot 99.9 2.3E-28 5E-33 269.1 5.2 256 679-983 15-270 (829)
407 KOG1152 Signal transduction se 99.9 1.8E-27 4E-32 257.6 9.5 199 677-911 559-770 (772)
408 KOG0665 Jun-N-terminal kinase 99.9 1.9E-27 4.1E-32 241.7 8.6 267 679-983 17-309 (369)
409 KOG1167 Serine/threonine prote 99.9 8.3E-27 1.8E-31 246.4 13.1 282 672-983 29-380 (418)
410 cd00180 PKc Catalytic domain o 99.9 6.6E-25 1.4E-29 228.5 20.5 212 687-984 1-214 (215)
411 KOG0670 U4/U6-associated splic 99.9 6.3E-26 1.4E-30 242.6 9.7 207 672-913 425-638 (752)
412 KOG4237 Extracellular matrix p 99.9 1.8E-27 3.9E-32 247.5 -3.7 411 128-573 52-498 (498)
413 smart00221 STYKc Protein kinas 99.9 2.4E-24 5.2E-29 227.2 18.4 201 681-912 1-202 (225)
414 PRK15387 E3 ubiquitin-protein 99.9 4.6E-24 1E-28 253.2 15.8 261 220-581 203-463 (788)
415 PRK15387 E3 ubiquitin-protein 99.9 7E-24 1.5E-28 251.6 16.4 263 199-538 206-468 (788)
416 PLN03210 Resistant to P. syrin 99.9 3.9E-23 8.4E-28 265.1 23.6 335 239-596 554-903 (1153)
417 PLN03210 Resistant to P. syrin 99.9 3.7E-23 8E-28 265.2 23.0 339 211-574 551-904 (1153)
418 KOG4237 Extracellular matrix p 99.9 2.2E-25 4.8E-30 232.0 -1.4 406 105-549 53-498 (498)
419 PRK15370 E3 ubiquitin-protein 99.9 4.9E-23 1.1E-27 246.5 14.5 377 27-455 57-470 (754)
420 PRK09188 serine/threonine prot 99.9 1.1E-22 2.5E-27 224.2 15.0 175 675-873 14-195 (365)
421 smart00750 KIND kinase non-cat 99.9 2.7E-22 5.8E-27 203.1 14.5 170 766-991 1-172 (176)
422 PLN00181 protein SPA1-RELATED; 99.9 3.3E-23 7.1E-28 258.2 9.4 207 732-983 28-264 (793)
423 KOG0195 Integrin-linked kinase 99.9 2.8E-23 6E-28 205.5 6.8 250 683-989 194-447 (448)
424 KOG1164 Casein kinase (serine/ 99.9 4.9E-21 1.1E-25 212.8 21.1 271 680-992 19-301 (322)
425 PRK15370 E3 ubiquitin-protein 99.9 8.5E-22 1.8E-26 235.9 12.1 246 219-528 179-428 (754)
426 KOG1240 Protein kinase contain 99.8 4.8E-22 1E-26 230.7 5.7 265 680-987 24-294 (1431)
427 KOG1165 Casein kinase (serine/ 99.8 5.9E-20 1.3E-24 187.6 19.5 268 680-991 29-302 (449)
428 KOG1163 Casein kinase (serine/ 99.8 1.4E-20 3.1E-25 183.8 14.2 208 678-914 14-225 (341)
429 KOG0590 Checkpoint kinase and 99.8 2.6E-20 5.6E-25 219.3 8.4 257 683-984 322-585 (601)
430 COG0515 SPS1 Serine/threonine 99.8 1.7E-18 3.7E-23 194.1 21.7 267 681-984 2-275 (384)
431 PRK10359 lipopolysaccharide co 99.8 1.6E-19 3.5E-24 184.8 9.4 176 677-904 29-216 (232)
432 KOG0617 Ras suppressor protein 99.8 5.8E-21 1.3E-25 176.9 -1.4 166 365-561 28-194 (264)
433 cd05147 RIO1_euk RIO kinase fa 99.8 3.1E-19 6.6E-24 181.4 10.9 139 684-840 2-167 (190)
434 PRK12274 serine/threonine prot 99.8 1.3E-18 2.9E-23 173.8 13.3 193 682-912 5-209 (218)
435 KOG0617 Ras suppressor protein 99.8 3.1E-21 6.8E-26 178.7 -5.3 179 416-600 31-213 (264)
436 cd00116 LRR_RI Leucine-rich re 99.8 1.4E-20 2.9E-25 210.3 -2.6 282 272-575 3-319 (319)
437 KOG4158 BRPK/PTEN-induced prot 99.8 1.1E-18 2.5E-23 182.0 11.2 212 734-985 274-511 (598)
438 cd05145 RIO1_like RIO kinase f 99.8 3.4E-18 7.3E-23 174.7 14.0 138 684-840 2-167 (190)
439 KOG1023 Natriuretic peptide re 99.8 2.1E-18 4.6E-23 193.2 12.8 225 730-990 1-226 (484)
440 PF14531 Kinase-like: Kinase-l 99.8 2.8E-18 6.1E-23 181.0 10.5 248 680-975 13-288 (288)
441 cd00116 LRR_RI Leucine-rich re 99.7 5.8E-20 1.3E-24 205.2 -3.4 283 222-551 2-319 (319)
442 PLN03150 hypothetical protein; 99.7 3.7E-18 8.1E-23 204.5 10.5 153 29-184 368-528 (623)
443 PRK10345 hypothetical protein; 99.7 3E-17 6.6E-22 168.1 14.4 139 682-837 5-156 (210)
444 KOG0603 Ribosomal protein S6 k 99.7 2.8E-18 6.2E-23 191.3 3.4 187 686-912 1-193 (612)
445 smart00090 RIO RIO-like kinase 99.7 1.5E-16 3.3E-21 167.3 12.9 143 679-840 28-198 (237)
446 KOG1166 Mitotic checkpoint ser 99.7 2.3E-16 5E-21 188.7 12.3 201 672-908 691-901 (974)
447 KOG1033 eIF-2alpha kinase PEK/ 99.7 4.1E-17 8.9E-22 178.7 4.3 202 681-905 246-457 (516)
448 KOG0606 Microtubule-associated 99.6 3.1E-16 6.8E-21 183.1 7.5 216 679-979 83-307 (1205)
449 PRK14879 serine/threonine prot 99.6 2.1E-15 4.6E-20 157.4 13.0 134 685-839 2-143 (211)
450 cd05144 RIO2_C RIO kinase fami 99.6 2.8E-15 6.1E-20 154.5 13.7 141 675-840 11-175 (198)
451 PRK09605 bifunctional UGMP fam 99.6 2.9E-15 6.3E-20 178.1 12.4 144 671-839 325-476 (535)
452 TIGR03724 arch_bud32 Kae1-asso 99.6 4.5E-15 9.8E-20 153.4 11.7 130 686-839 1-138 (199)
453 PLN03150 hypothetical protein; 99.5 1E-14 2.3E-19 174.9 7.9 118 492-612 419-538 (623)
454 KOG0532 Leucine-rich repeat (L 99.5 1.3E-15 2.9E-20 166.4 -0.5 196 367-573 72-270 (722)
455 cd05119 RIO RIO kinase family, 99.5 6.4E-14 1.4E-18 143.2 11.7 135 684-840 2-164 (187)
456 cd05120 APH_ChoK_like Aminogly 99.5 1.5E-13 3.1E-18 135.0 12.7 135 683-839 2-138 (155)
457 KOG0532 Leucine-rich repeat (L 99.5 8.8E-16 1.9E-20 167.8 -4.1 177 392-578 73-249 (722)
458 PRK01723 3-deoxy-D-manno-octul 99.5 2.2E-13 4.8E-18 143.7 14.2 139 684-839 36-191 (239)
459 KOG0590 Checkpoint kinase and 99.4 1.1E-14 2.3E-19 172.1 0.1 258 679-983 20-285 (601)
460 COG4886 Leucine-rich repeat (L 99.4 2.2E-13 4.7E-18 156.7 6.7 181 393-582 115-296 (394)
461 COG4886 Leucine-rich repeat (L 99.4 2.8E-13 6E-18 155.9 6.6 186 366-560 112-298 (394)
462 TIGR01982 UbiB 2-polyprenylphe 99.3 6.4E-12 1.4E-16 144.2 13.0 141 684-840 122-307 (437)
463 KOG1266 Protein kinase [Signal 99.3 2.1E-12 4.5E-17 132.8 7.5 208 729-983 120-330 (458)
464 KOG0601 Cyclin-dependent kinas 99.3 3.5E-12 7.5E-17 143.4 7.8 253 679-983 114-378 (524)
465 PRK04750 ubiB putative ubiquin 99.2 3.1E-11 6.7E-16 139.8 12.1 145 678-840 119-314 (537)
466 KOG1259 Nischarin, modulator o 99.2 3.4E-12 7.4E-17 129.2 -0.6 203 368-580 212-416 (490)
467 KOG1243 Protein kinase [Genera 99.2 6.2E-10 1.3E-14 126.3 16.3 170 697-906 30-199 (690)
468 cd05151 ChoK Choline Kinase (C 99.1 1.2E-10 2.6E-15 116.9 9.1 130 684-838 3-135 (170)
469 cd05146 RIO3_euk RIO kinase fa 99.1 9.5E-10 2.1E-14 110.6 13.5 137 684-840 2-174 (197)
470 KOG0531 Protein phosphatase 1, 99.1 2.1E-11 4.4E-16 140.5 0.3 199 366-577 114-319 (414)
471 KOG0531 Protein phosphatase 1, 99.1 3.3E-11 7.1E-16 138.8 1.3 215 348-576 74-290 (414)
472 KOG3207 Beta-tubulin folding c 99.0 4.1E-11 8.9E-16 128.1 1.0 160 242-407 120-284 (505)
473 KOG1909 Ran GTPase-activating 99.0 3.8E-12 8.3E-17 132.5 -6.8 16 216-231 118-133 (382)
474 KOG1909 Ran GTPase-activating 99.0 9.2E-12 2E-16 129.7 -4.8 198 74-306 30-256 (382)
475 PF08263 LRRNT_2: Leucine rich 99.0 1.9E-10 4.1E-15 85.2 3.5 39 32-70 2-43 (43)
476 KOG3207 Beta-tubulin folding c 99.0 5.1E-11 1.1E-15 127.4 -0.3 212 263-505 117-340 (505)
477 KOG1259 Nischarin, modulator o 99.0 1.4E-10 3.1E-15 117.7 2.7 197 392-598 212-411 (490)
478 KOG0601 Cyclin-dependent kinas 99.0 3.8E-10 8.2E-15 127.1 5.2 247 678-986 264-516 (524)
479 COG4248 Uncharacterized protei 99.0 2.1E-08 4.6E-13 107.2 17.2 282 682-994 14-306 (637)
480 PF14580 LRR_9: Leucine-rich r 99.0 4.3E-10 9.4E-15 110.8 4.3 78 490-569 63-146 (175)
481 PF14580 LRR_9: Leucine-rich r 99.0 6.1E-10 1.3E-14 109.8 5.2 112 214-334 15-126 (175)
482 COG3642 Mn2+-dependent serine/ 98.9 1.9E-08 4.1E-13 97.2 12.3 129 685-839 2-140 (204)
483 cd05154 ACAD10_11_like Acyl-Co 98.9 1.5E-08 3.2E-13 106.6 12.3 145 685-839 4-206 (223)
484 KOG3087 Serine/threonine prote 98.9 2E-08 4.3E-13 96.3 11.0 142 683-838 11-164 (229)
485 KOG4658 Apoptotic ATPase [Sign 98.8 6.1E-09 1.3E-13 127.8 7.0 277 171-456 523-808 (889)
486 PF13855 LRR_8: Leucine rich r 98.8 4.7E-09 1E-13 85.0 3.9 61 243-303 1-61 (61)
487 PF13855 LRR_8: Leucine rich r 98.8 5.8E-09 1.2E-13 84.5 3.6 60 516-575 2-61 (61)
488 KOG0606 Microtubule-associated 98.7 4E-09 8.7E-14 124.6 3.1 211 677-913 802-1038(1205)
489 KOG3741 Poly(A) ribonuclease s 98.7 3.5E-07 7.5E-12 100.9 17.3 178 691-909 288-475 (655)
490 PRK15123 lipopolysaccharide co 98.7 2.5E-07 5.5E-12 98.7 15.1 146 685-839 28-194 (268)
491 PF01163 RIO1: RIO1 family; I 98.7 1.2E-07 2.5E-12 95.3 10.9 125 694-840 1-156 (188)
492 KOG1859 Leucine-rich repeat pr 98.7 1.2E-09 2.6E-14 123.2 -3.9 180 411-601 102-294 (1096)
493 KOG4658 Apoptotic ATPase [Sign 98.6 3.6E-08 7.8E-13 121.2 5.2 227 347-578 572-809 (889)
494 COG0478 RIO-like serine/threon 98.6 2.6E-07 5.7E-12 94.8 10.2 134 681-838 93-250 (304)
495 PRK09902 hypothetical protein; 98.6 1.5E-06 3.2E-11 87.7 14.7 144 687-840 26-180 (216)
496 KOG1859 Leucine-rich repeat pr 98.5 1.6E-09 3.5E-14 122.3 -8.5 129 443-579 165-295 (1096)
497 KOG4579 Leucine-rich repeat (L 98.4 2.1E-08 4.6E-13 90.8 -2.4 59 492-552 78-136 (177)
498 PF06293 Kdo: Lipopolysacchari 98.4 3E-06 6.4E-11 87.6 12.2 110 720-839 55-170 (206)
499 COG0661 AarF Predicted unusual 98.3 4.1E-06 8.8E-11 96.9 13.0 138 685-840 131-315 (517)
500 KOG4579 Leucine-rich repeat (L 98.3 6.8E-08 1.5E-12 87.6 -2.3 41 486-527 95-135 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=4.4e-116 Score=1122.16 Aligned_cols=900 Identities=31% Similarity=0.510 Sum_probs=663.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCeeeeeeecCCCCcEEEEeccCCCCCCcccccccCcccccccccccccc
Q 001908 31 NETDRLALLAIKSQLHDPLGVTNSWNNSINLCQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNF 110 (997)
Q Consensus 31 ~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l 110 (997)
.++|+.||++||+++.||.+.+.+|+.+.+||.|.||+|++ .++|+.|||++|++.|.+++.+..+++|++|+|++|++
T Consensus 27 ~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~c~w~gv~c~~-~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~ 105 (968)
T PLN00113 27 HAEELELLLSFKSSINDPLKYLSNWNSSADVCLWQGITCNN-SSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQL 105 (968)
T ss_pred CHHHHHHHHHHHHhCCCCcccCCCCCCCCCCCcCcceecCC-CCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCcc
Confidence 46899999999999988988899998888999999999985 56999999999999999999999999999999999999
Q ss_pred CCCCCccCC-CCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcC
Q 001908 111 HGEIPKEIG-FLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPA 189 (997)
Q Consensus 111 ~g~~p~~~~-~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~ 189 (997)
+|.+|..+. .+++|++|+|++|.++|.+|. +.+.+|++|++++|.+.+.+|..++ .+++|++|+|++|.+.+.+|.
T Consensus 106 ~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~~L~L~~n~l~~~~p~ 182 (968)
T PLN00113 106 SGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIG-SFSSLKVLDLGGNVLVGKIPN 182 (968)
T ss_pred CCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHh-cCCCCCEEECccCcccccCCh
Confidence 999998765 788888888888888877775 4566777777777777777776664 466777777777777777777
Q ss_pred ccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCC
Q 001908 190 SIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASN 268 (997)
Q Consensus 190 ~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 268 (997)
.+++++ +.+|++++|++++.+|..++++++|++|+|++|++++.+|..++ ++++|++|++++|++++.+|.+|+++++
T Consensus 183 ~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~ 261 (968)
T PLN00113 183 SLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKN 261 (968)
T ss_pred hhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCC
Confidence 777663 55677777777777777777777777777777777766766654 5667777777777777667767777777
Q ss_pred CcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCc------------------chhhhhccCCCCcEEEeec
Q 001908 269 IEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDL------------------DFVTILTNCSKLKVLAFEE 330 (997)
Q Consensus 269 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------------------~~~~~l~~l~~L~~L~L~~ 330 (997)
|++|+|++|++++..|..+..+++|++|+|++|++....+..+ ..+..+..+++|+.|++++
T Consensus 262 L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~ 341 (968)
T PLN00113 262 LQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWS 341 (968)
T ss_pred CCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcC
Confidence 7777777777666666666666666666666666653211000 1123344445555555555
Q ss_pred CccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccc
Q 001908 331 NRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNI 410 (997)
Q Consensus 331 N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 410 (997)
|.+.+.+|..+..+ .+|+.|++++|++++.+|..+..+++|+.|++++|++.+.+|..+..+++|+.|+|++|++++.+
T Consensus 342 n~l~~~~p~~l~~~-~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~ 420 (968)
T PLN00113 342 NKFSGEIPKNLGKH-NNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGEL 420 (968)
T ss_pred CCCcCcCChHHhCC-CCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeEC
Confidence 55555555544444 44555555555555555555555555555555555555566666666666777777777776666
Q ss_pred hhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccc
Q 001908 411 PSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNL 490 (997)
Q Consensus 411 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l 490 (997)
|..|.++++|+.|+|++|++++.+|..+..+++|+.|+|++|++.+.+|..+ ...++ +.|++++|++++.+|..|.++
T Consensus 421 p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L-~~L~ls~n~l~~~~~~~~~~l 498 (968)
T PLN00113 421 PSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRL-ENLDLSRNQFSGAVPRKLGSL 498 (968)
T ss_pred ChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccc-eEEECcCCccCCccChhhhhh
Confidence 7777777777777777777777777767777777777777777777766654 34566 889999999999999999999
Q ss_pred cccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeC
Q 001908 491 KNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNL 570 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 570 (997)
++|+.|+|++|++++.+|..+.++++|++|+|++|.++|.+|..|..+++|+.|||++|+++|.+|..+..+++|+.|++
T Consensus 499 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~l 578 (968)
T PLN00113 499 SELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNI 578 (968)
T ss_pred hccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcCcccCCCCCcCCCCcceeecCCCCcCCCCCCCCCCCCCCcCCCCcccccccccccceeeehhhhhheeeeeeeeec
Q 001908 571 SYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGGSNELHLPSCPSKRSRKSTVLRLGKVGIPMIVSCLILSTCFIIVYARRR 650 (997)
Q Consensus 571 s~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~r~ 650 (997)
++|+++|.+|..+++.++....+.|||.+||..+....++|..... ...+...+++.++++++++++++++++.++|
T Consensus 579 s~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (968)
T PLN00113 579 SHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK---TPSWWFYITCTLGAFLVLALVAFGFVFIRGR 655 (968)
T ss_pred cCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc---cceeeeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999766555677753221 1111111111112112222222222222222
Q ss_pred ccccccCCCCccc---c-cCCc--cChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHH
Q 001908 651 RSKQESSISVPME---Q-YFPM--VSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFV 724 (997)
Q Consensus 651 ~~~~~~~~~~~~~---~-~~~~--~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~ 724 (997)
+..+.++...... . .+.. ............|+..+.||+|+||.||+|+...++..||||+++..... ..
T Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~ 731 (968)
T PLN00113 656 NNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PS 731 (968)
T ss_pred hcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cH
Confidence 2111111111000 0 0000 01112233345678889999999999999999889999999998643321 23
Q ss_pred HHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh
Q 001908 725 AECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH 804 (997)
Q Consensus 725 ~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH 804 (997)
+|++.+++++|||||+++++|.. .+..++||||+++|+|.++++. ++|.++.+++.||++|++|||
T Consensus 732 ~~~~~l~~l~HpnIv~~~~~~~~-----~~~~~lv~Ey~~~g~L~~~l~~---------l~~~~~~~i~~~ia~~L~yLH 797 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIGLCRS-----EKGAYLIHEYIEGKNLSEVLRN---------LSWERRRKIAIGIAKALRFLH 797 (968)
T ss_pred HHHHHHhhCCCCCcceEEEEEEc-----CCCCEEEEeCCCCCcHHHHHhc---------CCHHHHHHHHHHHHHHHHHhc
Confidence 46889999999999999999754 3468999999999999999963 688999999999999999999
Q ss_pred hCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCC
Q 001908 805 HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMG 884 (997)
Q Consensus 805 ~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~ 884 (997)
..+.++|+||||||+||+++.++.+++. ||.+.... ......||+.|+|||.+ .+
T Consensus 798 ~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~------------~~~~~~~t~~y~aPE~~------------~~ 852 (968)
T PLN00113 798 CRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC------------TDTKCFISSAYVAPETR------------ET 852 (968)
T ss_pred cCCCCCeecCCCCHHhEEECCCCceEEE-eccccccc------------cCCCccccccccCcccc------------cC
Confidence 7666699999999999999999988876 66543321 11123678999999544 45
Q ss_pred CCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcch-hhhhhcCcccccccccchhhhhHHHHHHHHHHH
Q 001908 885 SEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPE-KVMETVDPSLLLAWSDGRRRAKVEECLVTVIRI 963 (997)
Q Consensus 885 ~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~l 963 (997)
..++.++|||||||++|||+||+.||+........+.+|.+..... .....+|+.+.... ....++..++.++
T Consensus 853 ~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~l 926 (968)
T PLN00113 853 KDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV------SVNQNEIVEVMNL 926 (968)
T ss_pred CCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC------CccHHHHHHHHHH
Confidence 7789999999999999999999999976555555666666544322 23344555443221 1223456678899
Q ss_pred HhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 964 GVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 964 i~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
+.+||+.||++||||+|++++|+++.+
T Consensus 927 ~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 927 ALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred HHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 999999999999999999999998865
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.1e-60 Score=611.40 Aligned_cols=491 Identities=34% Similarity=0.534 Sum_probs=412.8
Q ss_pred cccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCcccc-CCCcccchhccccccccccccccccccccccee
Q 001908 98 SFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLS-SCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHI 176 (997)
Q Consensus 98 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~-~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L 176 (997)
.+++.|||++|.++|.+|..+..+++|++|+|++|.++|.+|..+. ++++|++|++++|++.|.+|.. .+++|++|
T Consensus 69 ~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~---~l~~L~~L 145 (968)
T PLN00113 69 SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRG---SIPNLETL 145 (968)
T ss_pred CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCcc---ccCCCCEE
Confidence 4689999999999999999999999999999999999999999877 8999999999999999999974 36899999
Q ss_pred ecccccccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcC
Q 001908 177 SLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYF 255 (997)
Q Consensus 177 ~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l 255 (997)
+|++|.+++.+|..+++++ +++|++++|.+.+.+|..++++++|++|+|++|++++.+|..++ ++++|++|+|++|++
T Consensus 146 ~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l 224 (968)
T PLN00113 146 DLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELG-QMKSLKWIYLGYNNL 224 (968)
T ss_pred ECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHc-CcCCccEEECcCCcc
Confidence 9999999999999999984 67899999999999999999999999999999999999998876 799999999999999
Q ss_pred cCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCC
Q 001908 256 SGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGG 335 (997)
Q Consensus 256 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 335 (997)
++.+|..++++++|++|+|++|++++.+|..|+++++|++|+|++|++... .+..+.++++|++|++++|++.+
T Consensus 225 ~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~------~p~~l~~l~~L~~L~Ls~n~l~~ 298 (968)
T PLN00113 225 SGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGP------IPPSIFSLQKLISLDLSDNSLSG 298 (968)
T ss_pred CCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeecc------CchhHhhccCcCEEECcCCeecc
Confidence 999999999999999999999999999999999999999999999999753 34566778888888888888888
Q ss_pred CCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhc
Q 001908 336 VLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLG 415 (997)
Q Consensus 336 ~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 415 (997)
.+|..+.++ ++|+.|++++|.+++.+|..++++++|+.|++++|++++.+|..++.+++|+.|+|++|++++.+|.++.
T Consensus 299 ~~p~~~~~l-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~ 377 (968)
T PLN00113 299 EIPELVIQL-QNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLC 377 (968)
T ss_pred CCChhHcCC-CCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHh
Confidence 888877776 6788888888888877777777788888888888888777777777777777777777777766666666
Q ss_pred CCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccc------------------------ccccccc
Q 001908 416 NLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILT------------------------ITTLSRF 471 (997)
Q Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------------------------l~~ll~~ 471 (997)
.+++|+.|++++|++.+.+|..+..+++|+.|++++|++++.+|..+.. ++++ +.
T Consensus 378 ~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L-~~ 456 (968)
T PLN00113 378 SSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSL-QM 456 (968)
T ss_pred CcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCC-cE
Confidence 5555555555555555555555555555555555555555555544444 4444 45
Q ss_pred cccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccc
Q 001908 472 LDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 472 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (997)
|+|++|++.+.+|..+ ..++|+.|++++|++++.+|..|.++++|+.|+|++|++++.+|..+..+++|+.|+|++|++
T Consensus 457 L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 535 (968)
T PLN00113 457 LSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQL 535 (968)
T ss_pred EECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcc
Confidence 5555555555555443 246677888888888888888999999999999999999999999999999999999999999
Q ss_pred cccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCC
Q 001908 552 SGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCG 601 (997)
Q Consensus 552 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~ 601 (997)
+|.+|..+..+++|+.|||++|+++|.+|.. ..+..+..+++.+|+..+.
T Consensus 536 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~ 586 (968)
T PLN00113 536 SGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGS 586 (968)
T ss_pred cccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceee
Confidence 9999999999999999999999999999875 5577899999999998763
No 3
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-46 Score=415.11 Aligned_cols=289 Identities=42% Similarity=0.680 Sum_probs=241.6
Q ss_pred cCCccChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEee
Q 001908 665 YFPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITV 744 (997)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 744 (997)
....+++.++..||++|...+.||+|+||.||+|... +++.||||++........++|..|++++.+++|||+|+++||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 4566899999999999999999999999999999997 558999998875443314569999999999999999999999
Q ss_pred eeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 745 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
|.+.+ ++.++|||||++|+|.++++..... +++|.+|++||.++|+||+|||+.+.|+|+||||||+|||+|
T Consensus 140 C~e~~----~~~~LVYEym~nGsL~d~L~~~~~~----~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 140 CLEGG----EHRLLVYEYMPNGSLEDHLHGKKGE----PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred EecCC----ceEEEEEEccCCCCHHHHhCCCCCC----CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 97532 2699999999999999999986532 589999999999999999999999988999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccc-cccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGI-KGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~-~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+++++||+|||+|+..+.. ....... .||.+|+|| ||...+..+.|+|||||||++.|+
T Consensus 212 ~~~~aKlsDFGLa~~~~~~--------~~~~~~~~~gt~gY~~P------------Ey~~~g~lt~KsDVySFGVvllEl 271 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEG--------DTSVSTTVMGTFGYLAP------------EYASTGKLTEKSDVYSFGVVLLEL 271 (361)
T ss_pred CCCCEEccCccCcccCCcc--------ccceeeecCCCCccCCh------------hhhccCCcCcccccccchHHHHHH
Confidence 9999999999999654210 0111111 799999999 677778999999999999999999
Q ss_pred HhCCCCCCcCc-CCCccHHHHHHhhcch-hhhhhcCccccc-ccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 904 FTRRRPTNCMF-QGGLTLHEFCKMALPE-KVMETVDPSLLL-AWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 904 ltg~~P~~~~~-~~~~~~~~~~~~~~~~-~~~~~~d~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
+||+.|.+... .+...+.+|++....+ +..+++||.+.. .+.+ .++...+.+++..|++.+|++||+|.|
T Consensus 272 itgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~-------~~~~~~~~~~a~~C~~~~~~~RP~m~~ 344 (361)
T KOG1187|consen 272 ITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPD-------EKEVKKLAELALRCLRPDPKERPTMSQ 344 (361)
T ss_pred HhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCCh-------HHHHHHHHHHHHHHcCcCCCcCcCHHH
Confidence 99999887544 3445578887665544 788999999863 2211 145667999999999999999999999
Q ss_pred HHHHHHHHH
Q 001908 981 VLAKLCAAR 989 (997)
Q Consensus 981 vl~~L~~~~ 989 (997)
|+++|+.+.
T Consensus 345 Vv~~L~~~~ 353 (361)
T KOG1187|consen 345 VVKELEGIL 353 (361)
T ss_pred HHHHHHhhc
Confidence 999996554
No 4
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-44 Score=373.18 Aligned_cols=253 Identities=27% Similarity=0.408 Sum_probs=207.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc-eE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD-FK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~-~~ 756 (997)
.+.+..+.||+|..|+|||++++.+++.+|+|++.. .++...+++.+|+++++..+||+||.+||.|. .+. ..
T Consensus 79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~-----~~~~~i 153 (364)
T KOG0581|consen 79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY-----SNGEEI 153 (364)
T ss_pred HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE-----eCCceE
Confidence 355667899999999999999999999999999963 34455688999999999999999999999953 344 69
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
+++||||++|+|++++...+ .+++...-+|+.+|++||.|||+.. +|+||||||+|||++..|+|||||||.
T Consensus 154 sI~mEYMDgGSLd~~~k~~g------~i~E~~L~~ia~~VL~GL~YLh~~~--~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 154 SICMEYMDGGSLDDILKRVG------RIPEPVLGKIARAVLRGLSYLHEER--KIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred EeehhhcCCCCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhcc--CeeeccCCHHHeeeccCCCEEeccccc
Confidence 99999999999999998764 4788899999999999999999742 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++.+.. .....++||..|||||.+. +..|+.++||||||+.++|+++|+.||......
T Consensus 226 S~~lvn----------S~a~tfvGT~~YMsPERi~------------g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~ 283 (364)
T KOG0581|consen 226 SGILVN----------SIANTFVGTSAYMSPERIS------------GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPP 283 (364)
T ss_pred cHHhhh----------hhcccccccccccChhhhc------------CCcCCcccceecccHHHHHHhhCCCCCCCcCCC
Confidence 988732 2345678999999996654 678999999999999999999999998754222
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHH-HHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE-ECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~-~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+.+.......+. .|.+ +. .+.+++.+++..|+++||.+||+++|+++
T Consensus 284 ~~~~~~Ll~~Iv~~p-----pP~l------------P~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 284 YLDIFELLCAIVDEP-----PPRL------------PEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCHHHHHHHHhcCC-----CCCC------------CcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 233333322221111 1111 11 35678899999999999999999999975
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-44 Score=393.06 Aligned_cols=262 Identities=32% Similarity=0.489 Sum_probs=209.5
Q ss_pred cCccCCcccccCcceEEEEEECCCCcE-EEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTF-VAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~-vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+....+.+|+|+||+||+|.++ |+. ||||++.... ....+.|.+|+.+|.+++|||||+++|+|.... ...
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~----~~~ 115 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPP----GSL 115 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC----Cce
Confidence 3344566999999999999995 555 9999997433 222679999999999999999999999986532 268
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-cEecCCCCCCeeeCCCC-cEEEccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP-IVHGDLKPSNVLLDHDM-VAHVSDF 834 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~-ivHrDlk~~NIll~~~~-~~kl~DF 834 (997)
++||||+++|+|.++++... ...+++..+++||.|||+||+|||++ + ||||||||+|||++.++ ++||+||
T Consensus 116 ~iVtEy~~~GsL~~~l~~~~----~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DF 188 (362)
T KOG0192|consen 116 CIVTEYMPGGSLSVLLHKKR----KRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADF 188 (362)
T ss_pred EEEEEeCCCCcHHHHHhhcc----cCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCC
Confidence 99999999999999998841 12599999999999999999999999 7 99999999999999998 9999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++...... .......||+.|||||++.. | ...|+.|+|||||||++|||+||+.||....
T Consensus 189 Glsr~~~~~~--------~~~~~~~GT~~wMAPEv~~~-------~---~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~ 250 (362)
T KOG0192|consen 189 GLSREKVISK--------TSMTSVAGTYRWMAPEVLRG-------E---KSPYTEKSDVYSFGIVLWELLTGEIPFEDLA 250 (362)
T ss_pred ccceeecccc--------ccccCCCCCccccChhhhcC-------C---CCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence 9998652211 22233689999999988863 1 5679999999999999999999999998553
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
. .......+. . +.+...+.+|+..+..+|..||..||+.||++.+++..|+.+.....
T Consensus 251 ~-~~~~~~v~~--------~------------~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 251 P-VQVASAVVV--------G------------GLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred H-HHHHHHHHh--------c------------CCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhc
Confidence 2 111111100 1 11112233478889999999999999999999999999999877554
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-44 Score=375.15 Aligned_cols=256 Identities=25% Similarity=0.344 Sum_probs=202.4
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch-------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-------GALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
..+.|.+.+.||+|+||.|-+|..+.+|+.||||+++...- .......+|+++|++++|||||++.++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~----- 244 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDF----- 244 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeee-----
Confidence 44678889999999999999999999999999999963211 112345799999999999999999999
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC---
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD--- 826 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~--- 826 (997)
|+.++..||||||++||+|.+++-..+ .+.+..-..+++|++.|+.|||++ ||+||||||+|||+..+
T Consensus 245 f~~~ds~YmVlE~v~GGeLfd~vv~nk------~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~ 315 (475)
T KOG0615|consen 245 FEVPDSSYMVLEYVEGGELFDKVVANK------YLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAED 315 (475)
T ss_pred eecCCceEEEEEEecCccHHHHHHhcc------ccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcc
Confidence 555668899999999999999998876 355556688999999999999999 99999999999999866
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCC-ccchhHHHHHHHHHHHh
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS-VTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~-~~~DvwSlGvvl~ellt 905 (997)
..+||+|||+|+... ........|||+.|.|||++... +..++ .++|+||+|||+|.+++
T Consensus 316 ~llKItDFGlAK~~g---------~~sfm~TlCGTpsYvAPEVl~~k----------g~~~~~~kVDiWSlGcvLfvcLs 376 (475)
T KOG0615|consen 316 CLLKITDFGLAKVSG---------EGSFMKTLCGTPSYVAPEVLASK----------GVEYYPSKVDIWSLGCVLFVCLS 376 (475)
T ss_pred eEEEecccchhhccc---------cceehhhhcCCccccChhheecC----------CeecccchheeeeccceEEEEec
Confidence 789999999999762 33455668999999999988742 22233 48999999999999999
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|.+||.+..++.....+... .+.. ...+...+..++..++|.+|+..||++|||+.|+++
T Consensus 377 G~pPFS~~~~~~sl~eQI~~----G~y~--------------f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 377 GYPPFSEEYTDPSLKEQILK----GRYA--------------FGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cCCCcccccCCccHHHHHhc----Cccc--------------ccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 99999865443322222211 1100 001122334556779999999999999999999975
No 7
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-44 Score=391.88 Aligned_cols=260 Identities=31% Similarity=0.477 Sum_probs=215.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.+.++..+.||+|-||+||.|.++ ...+||+|.++... ...+.|.+|+++|++++|++||+++++|.. ++..|
T Consensus 205 r~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~-----~~piy 277 (468)
T KOG0197|consen 205 REELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTK-----QEPIY 277 (468)
T ss_pred HHHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEec-----CCceE
Confidence 345567889999999999999996 45589999997542 234788899999999999999999999864 23799
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
||||||+.|+|.++++...+ ..+...+.+.++.|||+||+||+++ ++|||||.++||||+++..|||+|||+|
T Consensus 278 IVtE~m~~GsLl~yLr~~~~----~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLA 350 (468)
T KOG0197|consen 278 IVTEYMPKGSLLDYLRTREG----GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLA 350 (468)
T ss_pred EEEEecccCcHHHHhhhcCC----CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccc
Confidence 99999999999999998332 2488899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+......+ .......-+..|.|||++. .+.++.|+|||||||+||||+| |+.||..+.
T Consensus 351 r~~~d~~Y-------~~~~~~kfPIkWtAPEa~~------------~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms-- 409 (468)
T KOG0197|consen 351 RLIGDDEY-------TASEGGKFPIKWTAPEALN------------YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS-- 409 (468)
T ss_pred cccCCCce-------eecCCCCCCceecCHHHHh------------hCCcccccceeehhhhHHHHhccCCCCCCCCC--
Confidence 94422221 1222233467899996665 5889999999999999999999 888877432
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
..+. ....+.+++++.|..||+.++++|..||+.+|++|||++.+...++++...-
T Consensus 410 ---n~ev-----------------~~~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~~ 465 (468)
T KOG0197|consen 410 ---NEEV-----------------LELLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTST 465 (468)
T ss_pred ---HHHH-----------------HHHHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhcc
Confidence 2221 2223567788889999999999999999999999999999999998887543
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.9e-47 Score=393.95 Aligned_cols=474 Identities=27% Similarity=0.385 Sum_probs=306.9
Q ss_pred cEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcc
Q 001908 75 RVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAY 154 (997)
Q Consensus 75 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~ 154 (997)
.++.|++++|.+. .+.+.+.+|..|.+|++++|+++ +.|+++|.+..++.|+.|+|+++ ++|++++++.+|+.++.+
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4667777777764 45566777777777777777777 77777777777777777777777 777777777777777777
Q ss_pred cccccccccccccccccccceeecccccccCcCcCccCcc-hhhhhhccCccccccCCCcccCCCccceeeccCCCCCCC
Q 001908 155 RNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGN 233 (997)
Q Consensus 155 ~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~ 233 (997)
+|.+. ++|++++ .+..|+.|+..+|+++ ++|+.++++ ++..+++.+|++.. +|+..-+++.|++||...|-++ .
T Consensus 123 ~n~~~-el~~~i~-~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~~-l~~~~i~m~~L~~ld~~~N~L~-t 197 (565)
T KOG0472|consen 123 SNELK-ELPDSIG-RLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLKA-LPENHIAMKRLKHLDCNSNLLE-T 197 (565)
T ss_pred cccee-ecCchHH-HHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchhh-CCHHHHHHHHHHhcccchhhhh-c
Confidence 77776 6666665 3566677777777776 455555555 34456667776663 4444444666777776666665 6
Q ss_pred CCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcch
Q 001908 234 LPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDF 313 (997)
Q Consensus 234 lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 313 (997)
+|+.++ .+.+|..|+|.+|+|. .+| +|..++.|+.|+++.|+|.-.+.+..+.+.+|.+|||..|+++. .
T Consensus 198 lP~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke-------~ 267 (565)
T KOG0472|consen 198 LPPELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKE-------V 267 (565)
T ss_pred CChhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccccccc-------C
Confidence 666665 5666666666666666 445 56666666666666666664444444566666666666666654 3
Q ss_pred hhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCC---CCCCEEe-------ccCCC--
Q 001908 314 VTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNL---VNLNLLG-------IEFNQ-- 381 (997)
Q Consensus 314 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~L~-------L~~N~-- 381 (997)
|+.++-+++|++||+|+|.|+ .+|.+++++ .|+.|-+.+|-+.. +-..+-+. .-|++|. ++.-+
T Consensus 268 Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl--hL~~L~leGNPlrT-iRr~ii~~gT~~vLKyLrs~~~~dglS~se~~ 343 (565)
T KOG0472|consen 268 PDEICLLRSLERLDLSNNDIS-SLPYSLGNL--HLKFLALEGNPLRT-IRREIISKGTQEVLKYLRSKIKDDGLSQSEGG 343 (565)
T ss_pred chHHHHhhhhhhhcccCCccc-cCCcccccc--eeeehhhcCCchHH-HHHHHHcccHHHHHHHHHHhhccCCCCCCccc
Confidence 444555666666666666665 345555554 45555555555441 11111000 0011111 01000
Q ss_pred -C-CCC----CCCCcccccccceeccccccccccchhhhcCCCC---CCeEEeecCcCCCCCCCCCCCCCCCcEEecCCC
Q 001908 382 -L-TGN----IPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTL---MTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDN 452 (997)
Q Consensus 382 -l-~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 452 (997)
- .+. .......+.+.+.|+++.-+++ .+|.....-.. .+..+++.|++. ++|..+..++.+++.-+..|
T Consensus 344 ~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsn 421 (565)
T KOG0472|consen 344 TETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSN 421 (565)
T ss_pred ccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhc
Confidence 0 000 1112234566778888888887 56655444333 677888888887 67777777666555433333
Q ss_pred cccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCC
Q 001908 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIP 532 (997)
Q Consensus 453 ~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (997)
+..+.+|..++.++++ .+|+|++|-+. .+|.+++.+..|+.||+|.|+|. .+|..+..+..|+.+-.++|++....|
T Consensus 422 n~isfv~~~l~~l~kL-t~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~ 498 (565)
T KOG0472|consen 422 NKISFVPLELSQLQKL-TFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDP 498 (565)
T ss_pred CccccchHHHHhhhcc-eeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccCh
Confidence 3344778788888887 78888888877 77888888888888888888887 778777777777777777788876666
Q ss_pred hhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCc
Q 001908 533 LSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 533 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 576 (997)
..+.+|.+|.+|||.+|.|. .+|+.++++++|++|++++|+|.
T Consensus 499 ~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 499 SGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred HHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC
Confidence 66888888888888888887 77888888888888888888887
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2e-42 Score=379.89 Aligned_cols=248 Identities=25% Similarity=0.389 Sum_probs=209.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..|...+.||+|||+++|.+++.++|+.||+|++.. ......+...+||++.++++|||||+++++ |++.++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~-----FEDs~n 92 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHF-----FEDSNN 92 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeE-----eecCCc
Confidence 579999999999999999999988999999999974 345667889999999999999999999999 778889
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
+|+|.|+|+.++|.++++++. ++++.+++.+.+||+.|+.|||+. +|+|||||-.|+|++++.+|||+|||
T Consensus 93 VYivLELC~~~sL~el~Krrk------~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 93 VYIVLELCHRGSLMELLKRRK------PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred eEEEEEecCCccHHHHHHhcC------CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 999999999999999999654 589999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|..+.. ..+.....||||.|.|||++. ....+..+||||+|||||-|++|++||+..
T Consensus 164 LAt~le~--------~~Erk~TlCGTPNYIAPEVl~------------k~gHsfEvDiWSlGcvmYtLL~G~PPFetk-- 221 (592)
T KOG0575|consen 164 LATQLEY--------DGERKKTLCGTPNYIAPEVLN------------KSGHSFEVDIWSLGCVMYTLLVGRPPFETK-- 221 (592)
T ss_pred eeeeecC--------cccccceecCCCcccChhHhc------------cCCCCCchhhhhhhhHHHhhhhCCCCcccc--
Confidence 9998732 234566789999999997765 577899999999999999999999999843
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+.+..... +..+..-|. ....+-.+||.++++.||.+|||+.+|+.
T Consensus 222 ---~vkety~~I---k~~~Y~~P~---------------~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 222 ---TVKETYNKI---KLNEYSMPS---------------HLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred ---hHHHHHHHH---HhcCccccc---------------ccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 222221111 111222222 12334568999999999999999999975
No 10
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-42 Score=359.03 Aligned_cols=200 Identities=31% Similarity=0.562 Sum_probs=178.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..+|...++||+|+||+||+|+++.++.+||||.+... .....+.+..|+.+|+.++|||||.+++++. .+++
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~-----~~~~ 83 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE-----DDDF 83 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-----cCCe
Confidence 35788889999999999999999999999999999755 5566778899999999999999999999954 4569
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC------CcE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD------MVA 829 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~------~~~ 829 (997)
.|+|||||.||||.+|++.++ .+++...+.++.|+|.|+++||++ +||||||||+|||++.. -.+
T Consensus 84 i~lVMEyC~gGDLs~yi~~~~------~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~L 154 (429)
T KOG0595|consen 84 IYLVMEYCNGGDLSDYIRRRG------RLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVL 154 (429)
T ss_pred EEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceE
Confidence 999999999999999999986 488899999999999999999999 99999999999999865 468
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+.+. ........+|++.|||||++. .++|+.|+|+||.|+|+|+|++|+.|
T Consensus 155 KIADFGfAR~L~---------~~~~a~tlcGSplYMAPEV~~------------~~~YdAKADLWSiG~Ilyq~l~g~~P 213 (429)
T KOG0595|consen 155 KIADFGFARFLQ---------PGSMAETLCGSPLYMAPEVIM------------SQQYDAKADLWSIGTILYQCLTGKPP 213 (429)
T ss_pred EecccchhhhCC---------chhHHHHhhCCccccCHHHHH------------hccccchhhHHHHHHHHHHHHhCCCC
Confidence 999999999873 233445679999999997664 57899999999999999999999999
Q ss_pred CCc
Q 001908 910 TNC 912 (997)
Q Consensus 910 ~~~ 912 (997)
|+.
T Consensus 214 f~a 216 (429)
T KOG0595|consen 214 FDA 216 (429)
T ss_pred ccc
Confidence 984
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-43 Score=348.92 Aligned_cols=260 Identities=25% Similarity=0.373 Sum_probs=209.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEec--ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce-
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF- 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~- 755 (997)
.+|++.++||.|.||+||+++...+|..||.|.++ ..+....+....|+.+|++++|||||+++++. +..+..
T Consensus 19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~----f~~~~ev 94 (375)
T KOG0591|consen 19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHS----FIEDNEV 94 (375)
T ss_pred HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHh----hhccchh
Confidence 46889999999999999999999999999999987 34556678899999999999999999998853 333444
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeCCCCcEEEcc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+++|||||+.|+|.+.++....+ ...+++..+|+++.|++.||..+|++ .+. |.||||||.||+++.+|.||++|
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~q--kr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGD 171 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQ--KRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGD 171 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhc--cccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeecc
Confidence 89999999999999999865532 23588999999999999999999994 235 99999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++.+.. ........+|||.||+||++. +.+|+.++||||+||++|||+.-++||...
T Consensus 172 fGL~r~l~s--------~~tfA~S~VGTPyYMSPE~i~------------~~~Y~~kSDiWslGCllyEMcaL~~PF~g~ 231 (375)
T KOG0591|consen 172 FGLGRFLSS--------KTTFAHSLVGTPYYMSPERIH------------ESGYNFKSDIWSLGCLLYEMCALQSPFYGD 231 (375)
T ss_pred chhHhHhcc--------hhHHHHhhcCCCcccCHHHHh------------cCCCCcchhHHHHHHHHHHHHhcCCCcccc
Confidence 999998732 223445578999999996654 688999999999999999999999999843
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhH-HHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKV-EECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.+.+......... ..+.+ +.+..++..||..|+..||+.||+...+++.+..
T Consensus 232 -----n~~~L~~KI~qgd-----------------~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 232 -----NLLSLCKKIEQGD-----------------YPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred -----cHHHHHHHHHcCC-----------------CCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 3444332221111 11112 3456678899999999999999986555555544
No 12
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.4e-43 Score=399.32 Aligned_cols=267 Identities=29% Similarity=0.492 Sum_probs=221.4
Q ss_pred hhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
..+....+.||+|+||+||+|+.. .....||||.++...+. ...+|++|+++++.++|||||+++|+|.+.
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~--- 561 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREG--- 561 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC---
Confidence 345667899999999999999874 34457999999866555 789999999999999999999999999764
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCC--------cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPE--------VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--------~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
+..|||+|||..|||.+||........ ..+++..+.+.||.|||.||+||-++ .+|||||.++|+||
T Consensus 562 --~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 562 --DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLV 636 (774)
T ss_pred --CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhcee
Confidence 489999999999999999997653221 22488999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+++..|||+|||+++.++..++..... ...-+..|||| |.+..+++++++|||||||||||+
T Consensus 637 ge~l~VKIsDfGLsRdiYssDYYk~~~------~t~lPIRWMpp------------EsIly~kFTteSDVWs~GVvLWEI 698 (774)
T KOG1026|consen 637 GENLVVKISDFGLSRDIYSSDYYKVRG------NTLLPIRWMPP------------ESILYGKFTTESDVWSFGVVLWEI 698 (774)
T ss_pred ccceEEEecccccchhhhhhhhhcccC------CceeeeecCCH------------HHhhcCcccchhhhhhhhhhhhhh
Confidence 999999999999999987776654321 22346799999 555579999999999999999999
Q ss_pred Hh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 904 FT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 904 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
++ |+.||+....+ ++.+.+. ++...+.++.||.+++.||..||+..|++||+++||-
T Consensus 699 FsyG~QPy~glSn~--------------EVIe~i~--------~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~ 756 (774)
T KOG1026|consen 699 FSYGKQPYYGLSNQ--------------EVIECIR--------AGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIH 756 (774)
T ss_pred hccccCcccccchH--------------HHHHHHH--------cCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHH
Confidence 99 99998854322 1111111 2223456788999999999999999999999999999
Q ss_pred HHHHHHHHHh
Q 001908 983 AKLCAARQTL 992 (997)
Q Consensus 983 ~~L~~~~~~~ 992 (997)
..|++..++-
T Consensus 757 ~~L~~~~~~s 766 (774)
T KOG1026|consen 757 SRLQAWAQAS 766 (774)
T ss_pred HHHHHHHhcC
Confidence 9999987754
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.4e-42 Score=344.84 Aligned_cols=268 Identities=21% Similarity=0.321 Sum_probs=204.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+.|+...++|+|+||+||+|+.+++|+.||||++... ++...+-.++|+++|++++|+|+|.++.+ |......
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEV-----Frrkrkl 76 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEV-----FRRKRKL 76 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHH-----HHhccee
Confidence 3577889999999999999999999999999999633 23445667999999999999999999999 6677899
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++|+|||+- ++.+-++.... .++...+.++.+|++.|+.|+|++ +|+||||||+||||+.+|.+|+||||+
T Consensus 77 hLVFE~~dh-TvL~eLe~~p~-----G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGF 147 (396)
T KOG0593|consen 77 HLVFEYCDH-TVLHELERYPN-----GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGF 147 (396)
T ss_pred EEEeeecch-HHHHHHHhccC-----CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchh
Confidence 999999955 66666766542 377889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+.+.. ....-+.++.|.+|+|||.+-+ +.+|+..+||||.||++.||++|.+-|.+.
T Consensus 148 AR~L~~--------pgd~YTDYVATRWYRaPELLvG-----------DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~--- 205 (396)
T KOG0593|consen 148 ARTLSA--------PGDNYTDYVATRWYRAPELLVG-----------DTQYGKPVDIWAIGCVFAELLTGEPLWPGR--- 205 (396)
T ss_pred hHhhcC--------CcchhhhhhhhhhccChhhhcc-----------cCcCCCcccchhhhHHHHHHhcCCcCCCCc---
Confidence 998732 2233455789999999987753 478999999999999999999999987643
Q ss_pred CccHHHHHHh------hcchhh-hhhcCcccccccccchhhh-----hHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKM------ALPEKV-METVDPSLLLAWSDGRRRA-----KVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~------~~~~~~-~~~~d~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.++++.... ..|... .....+.+.+..-+..+.+ .......-+.++++.|++.||++|++.+|++.
T Consensus 206 -SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 206 -SDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred -chHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 334333221 122111 0111222221111111101 11122336789999999999999999999863
No 14
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.7e-45 Score=379.33 Aligned_cols=477 Identities=26% Similarity=0.360 Sum_probs=407.8
Q ss_pred ccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccccccccccccccccccee
Q 001908 97 LSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHI 176 (997)
Q Consensus 97 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L 176 (997)
-..|+.|++++|.+. .+-+.+.+|..|.+|++++|.++ ++|+.+|.+..++.++.++|++. .+|+.++ ++.+|..|
T Consensus 44 qv~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~-s~~~l~~l 119 (565)
T KOG0472|consen 44 QVDLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIG-SLISLVKL 119 (565)
T ss_pred hcchhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHh-hhhhhhhh
Confidence 356889999999999 66667899999999999999999 99999999999999999999998 8999987 57899999
Q ss_pred ecccccccCcCcCccCcc-hhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcC
Q 001908 177 SLARNHLTGMLPASIGNL-SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYF 255 (997)
Q Consensus 177 ~L~~N~l~g~~p~~~~~l-~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l 255 (997)
+.++|.+. .+|++++.+ .+..++..+|+++ ++|..++++.+|..|++.+|++. .+|+..- +++.|++||.-+|-+
T Consensus 120 ~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~~~~l~~l~~~~n~l~-~l~~~~i-~m~~L~~ld~~~N~L 195 (565)
T KOG0472|consen 120 DCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVNLSKLSKLDLEGNKLK-ALPENHI-AMKRLKHLDCNSNLL 195 (565)
T ss_pred hcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHHHHHHHHhhccccchh-hCCHHHH-HHHHHHhcccchhhh
Confidence 99999999 677788876 5678999999999 78999999999999999999999 6777665 489999999999998
Q ss_pred cCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCC
Q 001908 256 SGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGG 335 (997)
Q Consensus 256 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~ 335 (997)
+ .+|+.++.+.+|+.|||.+|+|...+ .|.++..|+.|.++.|.|+.+++. ...++++|.+|||.+|+++
T Consensus 196 ~-tlP~~lg~l~~L~~LyL~~Nki~~lP--ef~gcs~L~Elh~g~N~i~~lpae------~~~~L~~l~vLDLRdNklk- 265 (565)
T KOG0472|consen 196 E-TLPPELGGLESLELLYLRRNKIRFLP--EFPGCSLLKELHVGENQIEMLPAE------HLKHLNSLLVLDLRDNKLK- 265 (565)
T ss_pred h-cCChhhcchhhhHHHHhhhcccccCC--CCCccHHHHHHHhcccHHHhhHHH------Hhcccccceeeeccccccc-
Confidence 8 89999999999999999999998655 899999999999999999876553 4568999999999999999
Q ss_pred CCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccccc--ccceecc-------ccccc
Q 001908 336 VLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLR--NLQAIGL-------SSNFL 406 (997)
Q Consensus 336 ~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L-------s~N~l 406 (997)
..|+.+.-+ ++|.+||+++|.|+ .+|.+++++ .|+.|-+.+|-+..+..+-+.+=+ -|++|.= +.-.=
T Consensus 266 e~Pde~clL-rsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~ 342 (565)
T KOG0472|consen 266 EVPDEICLL-RSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEG 342 (565)
T ss_pred cCchHHHHh-hhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcc
Confidence 678888776 78999999999998 678889999 899999999988743222222111 1333321 11100
Q ss_pred ----ccc-ch---hhhcCCCCCCeEEeecCcCCCCCCCCCCCCCC---CcEEecCCCcccCCcccccccccccccccccC
Q 001908 407 ----QGN-IP---SSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKN---LVSLNLSDNKLIGAVPQQILTITTLSRFLDLG 475 (997)
Q Consensus 407 ----~~~-~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~---L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls 475 (997)
.+. .+ .....+.+.+.|+++.=+++ .+|+....-.. .+..+++.|++. ++|..+..+..+.+.++++
T Consensus 343 ~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt-~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~ls 420 (565)
T KOG0472|consen 343 GTETAMTLPSESFPDIYAIITTKILDVSDKQLT-LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLS 420 (565)
T ss_pred cccccCCCCCCcccchhhhhhhhhhcccccccc-cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhh
Confidence 001 11 12334667899999999999 57765444333 789999999998 9999999999987889999
Q ss_pred CCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccC
Q 001908 476 NNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQI 555 (997)
Q Consensus 476 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (997)
+|.++ .+|..++.+++|..|+|++|.+. .+|..++.+..|+.|++|+|+|. .+|..+..+..|+.+-.++|++....
T Consensus 421 nn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd 497 (565)
T KOG0472|consen 421 NNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVD 497 (565)
T ss_pred cCccc-cchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccC
Confidence 99988 88999999999999999999998 89999999999999999999999 89999999999999999999999777
Q ss_pred chhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCc
Q 001908 556 PEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKL 599 (997)
Q Consensus 556 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~ 599 (997)
|+.+.++.+|..|||.+|.+...+|..+.+.+++.+.+.|||..
T Consensus 498 ~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 498 PSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 77799999999999999999999998899999999999999885
No 15
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-41 Score=362.32 Aligned_cols=260 Identities=25% Similarity=0.384 Sum_probs=211.4
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
.....+|.+++.||+|+|++|++|+.+++++.||||++.+ ..+..++...+|-++|.++ +||.|++++.. |
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~T-----F 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFT-----F 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEE-----e
Confidence 3455789999999999999999999999999999999963 2344557778899999999 89999999987 7
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
++...+|+|+||+++|+|.++|++.+ .+++.-.+.+|.+|+.|++|||+. |||||||||+|||+|.||++|
T Consensus 144 QD~~sLYFvLe~A~nGdll~~i~K~G------sfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhik 214 (604)
T KOG0592|consen 144 QDEESLYFVLEYAPNGDLLDLIKKYG------SFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIK 214 (604)
T ss_pred ecccceEEEEEecCCCcHHHHHHHhC------cchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEE
Confidence 78889999999999999999999987 588889999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCc---cccccc--cccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 831 VSDFGLARFLFARPFDTS---METQSS--SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~---~~~~~~--~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
|+|||.|+.+.+...... ...... ...++||..|++||++. ++..++.+|+|+|||++|.|+.
T Consensus 215 ITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~------------~~~~~~~sDiWAlGCilyQmla 282 (604)
T KOG0592|consen 215 ITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLN------------DSPAGPSSDLWALGCILYQMLA 282 (604)
T ss_pred EeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhc------------CCCCCcccchHHHHHHHHHHhc
Confidence 999999999865433311 111111 25589999999997665 5788999999999999999999
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|.+||.+.. .+..+ ++++..--+ .++..++.+.+|+.+.+..||.+|+|.+||.+
T Consensus 283 G~PPFra~N----eyliF------qkI~~l~y~-------------fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 283 GQPPFRAAN----EYLIF------QKIQALDYE-------------FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred CCCCCcccc----HHHHH------HHHHHhccc-------------CCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 999998431 11111 111111111 11222456779999999999999999988865
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-41 Score=370.18 Aligned_cols=270 Identities=27% Similarity=0.406 Sum_probs=214.8
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
.++++..+++.+...||+|.||+||+|+|. | .||||+++.. .++..+.|+.|+..+++-+|.||+-+.|||..+
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p- 460 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP- 460 (678)
T ss_pred cccccCHHHhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC-
Confidence 556666677888999999999999999995 3 3999999743 345778999999999999999999999998653
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
..+||+.+|+|-+|+.+++... ..+++.+.+.||+||++||.|||++ +|+|||+|+.|||+.++++|
T Consensus 461 -----~~AIiTqwCeGsSLY~hlHv~e-----tkfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kV 527 (678)
T KOG0193|consen 461 -----PLAIITQWCEGSSLYTHLHVQE-----TKFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKV 527 (678)
T ss_pred -----ceeeeehhccCchhhhhccchh-----hhhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcE
Confidence 3499999999999999999865 3589999999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|..-. .-..........|...|||||++.... ..+|++++||||||||+|||+||..|
T Consensus 528 kIgDFGLatvk~------~w~g~~q~~qp~gsilwmAPEvIRmqd---------~nPfS~qSDVYaFGiV~YELltg~lP 592 (678)
T KOG0193|consen 528 KIGDFGLATVKT------RWSGEQQLEQPHGSLLWMAPEVIRMQD---------DNPFSFQSDVYAFGIVWYELLTGELP 592 (678)
T ss_pred EEecccceeeee------eeccccccCCCccchhhhcHHHHhhcc---------cCCCCcccchhhhhHHHHHHHhCcCC
Confidence 999999986421 111122233456888999999997321 57899999999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
|.... -++.+.+.-+. ...|... ..-..|+.+|.+|+..||.+++++||.+.+++..|+++.
T Consensus 593 ysi~~-----~dqIifmVGrG----~l~pd~s---------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 593 YSIQN-----RDQIIFMVGRG----YLMPDLS---------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred cCCCC-----hhheEEEeccc----ccCccch---------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 87221 11111111111 0111111 112367889999999999999999999999999998876
Q ss_pred HH
Q 001908 990 QT 991 (997)
Q Consensus 990 ~~ 991 (997)
..
T Consensus 655 ~~ 656 (678)
T KOG0193|consen 655 PS 656 (678)
T ss_pred hc
Confidence 63
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-41 Score=349.26 Aligned_cols=245 Identities=26% Similarity=0.387 Sum_probs=201.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.++||+|+||+||.++.+++++.||+|++++. ...+.+...+|..+|.+++||.||+++.. |++.
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ys-----FQt~ 97 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYS-----FQTE 97 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEe-----cccC
Confidence 356899999999999999999999999999999999743 34456788999999999999999999866 8889
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+.+|+|+||+.||.|..+|++.+ .+++..+.-++.+|+.||.|||++ +|||||+||+|||+|++|+++|+|
T Consensus 98 ~kLylVld~~~GGeLf~hL~~eg------~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtD 168 (357)
T KOG0598|consen 98 EKLYLVLDYLNGGELFYHLQREG------RFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTD 168 (357)
T ss_pred CeEEEEEeccCCccHHHHHHhcC------CcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEec
Confidence 99999999999999999999876 478888899999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++.... .......++||+.|||||++. +.+|+.++|+||+||++|||++|.+||...
T Consensus 169 FgL~k~~~~--------~~~~t~tfcGT~eYmAPEil~------------~~gy~~~vDWWsLGillYeML~G~pPF~~~ 228 (357)
T KOG0598|consen 169 FGLCKEDLK--------DGDATRTFCGTPEYMAPEILL------------GKGYDKAVDWWSLGILLYEMLTGKPPFYAE 228 (357)
T ss_pred cccchhccc--------CCCccccccCCccccChHHHh------------cCCCCcccchHhHHHHHHHHhhCCCCCcCc
Confidence 999986422 223334589999999996654 678999999999999999999999999842
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
+..++.+.....+... -|. ....+..+++.+.+..||++|..
T Consensus 229 -----~~~~~~~~I~~~k~~~--~p~---------------~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 229 -----DVKKMYDKILKGKLPL--PPG---------------YLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred -----cHHHHHHHHhcCcCCC--CCc---------------cCCHHHHHHHHHHhccCHHHhcC
Confidence 3333333332222000 000 01234568899999999999963
No 18
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-40 Score=346.29 Aligned_cols=279 Identities=25% Similarity=0.397 Sum_probs=223.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc--CCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++.+..+.||+|.||+||+|.| .|+.||||+|...+ ++.+.+|.++.+.. +|+||+.+++.-.. +-..-.++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~w--rGe~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~-~~gs~TQL 284 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRW--RGEDVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNK-DNGSWTQL 284 (513)
T ss_pred heeEEEEEecCccccceeeccc--cCCceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhcccc-CCCceEEE
Confidence 6778889999999999999999 58999999997544 37889999999874 99999999986221 11223568
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-----CCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-----HCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-----~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
++|++|.+.|||+||+.... ++....++++..+|.||++||. +.+|.|+|||||+.||||..++++.|
T Consensus 285 wLvTdYHe~GSL~DyL~r~t-------v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~I 357 (513)
T KOG2052|consen 285 WLVTDYHEHGSLYDYLNRNT-------VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCI 357 (513)
T ss_pred EEeeecccCCcHHHHHhhcc-------CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEE
Confidence 99999999999999999865 8889999999999999999994 45789999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-----
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR----- 906 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg----- 906 (997)
+|+|+|....... ..........+||..|||||+++...+..+||. -..+||||||.|+||++.+
T Consensus 358 ADLGLAv~h~~~t----~~idi~~N~rVGTKRYMAPEvLdetin~~~Fes------yk~ADIYafgLVlWEiarRc~~gg 427 (513)
T KOG2052|consen 358 ADLGLAVRHDSDT----DTIDIPPNPRVGTKRYMAPEVLDETINMKHFES------YKRADIYAFGLVLWEIARRCESGG 427 (513)
T ss_pred eeceeeEEecccC----CcccCCCCCccceeeccChHHhhhhcChhhhhh------hhHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999998764322 234455667899999999999997777666663 2468999999999998764
Q ss_pred -----CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 907 -----RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 907 -----~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
+.||++....+..++++.+...-++. +|.+... ....++...+.++|+.||..+|..|.|+-.+
T Consensus 428 i~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~----RP~ipnr-------W~s~~~l~~m~klMkeCW~~Np~aRltALri 496 (513)
T KOG2052|consen 428 IVEEYQLPYYDVVPSDPSFEEMRKVVCVQKL----RPNIPNR-------WKSDPALRVMAKLMKECWYANPAARLTALRI 496 (513)
T ss_pred EehhhcCCcccCCCCCCCHHHHhcceeeccc----CCCCCcc-------cccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence 46777666666666665443333332 2222222 2345678899999999999999999999999
Q ss_pred HHHHHHHHHH
Q 001908 982 LAKLCAARQT 991 (997)
Q Consensus 982 l~~L~~~~~~ 991 (997)
.+.|.++-+.
T Consensus 497 KKtl~~l~~~ 506 (513)
T KOG2052|consen 497 KKTLAKLSNS 506 (513)
T ss_pred HHHHHHHhcC
Confidence 9999998753
No 19
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-41 Score=354.53 Aligned_cols=271 Identities=21% Similarity=0.298 Sum_probs=206.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 754 (997)
.-++|...++||.|+||.||+|+..+++..||||+++..- ..+...-.||++.|++++ ||||+++..++.+ ...
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d----~~~ 83 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD----NDR 83 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc----cCc
Confidence 3468999999999999999999999999999999987432 222334478999999998 9999999999543 223
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
.+++||||| ..+|++.++.++. .+++..++.|+.||++||+|+|.+ |+.|||+||+||||.....+||+||
T Consensus 84 ~L~fVfE~M-d~NLYqLmK~R~r-----~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDF 154 (538)
T KOG0661|consen 84 ILYFVFEFM-DCNLYQLMKDRNR-----LFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADF 154 (538)
T ss_pred eEeeeHHhh-hhhHHHHHhhcCC-----cCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccc
Confidence 899999999 4599999998742 599999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.+... ..-+.++-|.+|+|||++-. .+-|+.+.||||+|||++|+.+-++-|.+..
T Consensus 155 GLARev~Sk---------pPYTeYVSTRWYRAPEvLLr-----------s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~s 214 (538)
T KOG0661|consen 155 GLAREVRSK---------PPYTEYVSTRWYRAPEVLLR-----------SGYYSSPVDMWAVGCIMAELYSLRPLFPGAS 214 (538)
T ss_pred ccccccccC---------CCcchhhhcccccchHHhhh-----------ccccCCchHHHHHHHHHHHHHHhcccCCCCc
Confidence 999987433 23345788999999988753 5779999999999999999999998876432
Q ss_pred CCCccHHHHHHhh--cchhhhhhcCc------cccccccc--ch-hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA--LPEKVMETVDP------SLLLAWSD--GR-RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~~~~~~~~d~------~~~~~~~~--~~-~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+++..+.. +.....+.... .+...+.. +. .......+..+..+++..|+++||++||||+|+++
T Consensus 215 ----E~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~ 290 (538)
T KOG0661|consen 215 ----EIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQ 290 (538)
T ss_pred ----HHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhc
Confidence 233322221 11000000000 00000000 00 01111236677889999999999999999999986
Q ss_pred H
Q 001908 984 K 984 (997)
Q Consensus 984 ~ 984 (997)
.
T Consensus 291 ~ 291 (538)
T KOG0661|consen 291 H 291 (538)
T ss_pred C
Confidence 4
No 20
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-41 Score=366.83 Aligned_cols=372 Identities=21% Similarity=0.233 Sum_probs=278.5
Q ss_pred hhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCc
Q 001908 198 YLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPIN 277 (997)
Q Consensus 198 ~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 277 (997)
.|++++|+++..-+..|.++.+|++++|..|.++ .||.... ...+|+.|+|.+|.|+..-.++++.+..|+.||||.|
T Consensus 82 ~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~-~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN 159 (873)
T KOG4194|consen 82 TLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGH-ESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRN 159 (873)
T ss_pred eeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccc-cccceeEEeeeccccccccHHHHHhHhhhhhhhhhhc
Confidence 4888888888777777888888888888888887 7776554 4566888888888888777777888888888888888
Q ss_pred cCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcc
Q 001908 278 YFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQ 357 (997)
Q Consensus 278 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~ 357 (997)
.|+.+....|..-.++++|+|++|+|+.+..+.| .++.+|..|.|+.|+++...+..|.++ +.|+.|+|..|+
T Consensus 160 ~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F------~~lnsL~tlkLsrNrittLp~r~Fk~L-~~L~~LdLnrN~ 232 (873)
T KOG4194|consen 160 LISEIPKPSFPAKVNIKKLNLASNRITTLETGHF------DSLNSLLTLKLSRNRITTLPQRSFKRL-PKLESLDLNRNR 232 (873)
T ss_pred hhhcccCCCCCCCCCceEEeeccccccccccccc------cccchheeeecccCcccccCHHHhhhc-chhhhhhccccc
Confidence 8888777788877888888888888887776543 466677888888888886666666666 667778888887
Q ss_pred cccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCC
Q 001908 358 ISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPS 437 (997)
Q Consensus 358 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 437 (997)
|.-.--..|.+|++|+.|.|..|.|+..-...|..+.++++|+|+.|+++..-..|+.+|+.|+.|+||+|.|..+-++.
T Consensus 233 irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~ 312 (873)
T KOG4194|consen 233 IRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDS 312 (873)
T ss_pred eeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecch
Confidence 77444566777777888888888777777777777777888888888777666677777777888888888777777777
Q ss_pred CCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccc---cccCC
Q 001908 438 LGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPV---TLTGC 514 (997)
Q Consensus 438 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~---~~~~l 514 (997)
....++|++|+|++|+++..-+..|..+..| +.|+|++|+++..-...|..+++|++|||++|.|++.|.+ .|.++
T Consensus 313 WsftqkL~~LdLs~N~i~~l~~~sf~~L~~L-e~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl 391 (873)
T KOG4194|consen 313 WSFTQKLKELDLSSNRITRLDEGSFRVLSQL-EELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGL 391 (873)
T ss_pred hhhcccceeEeccccccccCChhHHHHHHHh-hhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccc
Confidence 7777777888888887775555666666666 7777777777766666777777777777777777766653 46677
Q ss_pred cCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 515 TGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 515 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
++|+.|+|.+|+|..+.-.+|.+++.|+.|||.+|.|..+-|.+|..+ .|++|-+..-.+-+.+.
T Consensus 392 ~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDCq 456 (873)
T KOG4194|consen 392 PSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDCQ 456 (873)
T ss_pred hhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEecc
Confidence 777777777777775445677777777777777777777777777777 77777666555544443
No 21
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=343.58 Aligned_cols=263 Identities=20% Similarity=0.298 Sum_probs=209.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|....+||.|..++||+|+...++..||||++.... ....+.+++|++.|+.++||||++++.. |..+...
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~s-----Fvv~~~L 99 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCS-----FVVDSEL 99 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEE-----EEeccee
Confidence 468999999999999999999999999999999997432 3346899999999999999999999887 5556799
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+||.||.+|++.+.++..-.. .+++..+..|.+++++||.|||.+ |.+|||||+.||||+.+|.|||+|||.
T Consensus 100 WvVmpfMa~GS~ldIik~~~~~----Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgv 172 (516)
T KOG0582|consen 100 WVVMPFMAGGSLLDIIKTYYPD----GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGV 172 (516)
T ss_pred EEeehhhcCCcHHHHHHHHccc----cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCcee
Confidence 9999999999999999986522 388999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+..+.... .+.........||++|||||++.. ....|+.|+|||||||...|+.+|..||.....-
T Consensus 173 sa~l~~~G----~R~~~rf~tfvgtp~wmAPEvl~q----------~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm 238 (516)
T KOG0582|consen 173 SASLFDSG----DRQVTRFNTFVGTPCWMAPEVLMQ----------QLHGYDFKADIWSFGITACELAHGHAPFSKYPPM 238 (516)
T ss_pred eeeecccC----ceeeEeeccccCcccccChHHhhh----------cccCccchhhhhhhhHHHHHHhcCCCCcccCChH
Confidence 88775432 111111166789999999999653 1357999999999999999999999999854221
Q ss_pred CccHHHHHHhhcchhh----hhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKV----METVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~----~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+..-+.+.... ....|. .+.......+.+++..|+..||++|||++++++
T Consensus 239 -----kvLl~tLqn~pp~~~t~~~~~------------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 239 -----KVLLLTLQNDPPTLLTSGLDK------------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred -----HHHHHHhcCCCCCcccccCCh------------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 11111111111 111111 111223347889999999999999999999975
No 22
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-41 Score=377.32 Aligned_cols=271 Identities=28% Similarity=0.470 Sum_probs=223.6
Q ss_pred CccChHHHHHHhhcC---------ccCCcccccCcceEEEEEECCCCc---EEEEEEeccc-chhhHHHHHHHHHHHhhc
Q 001908 667 PMVSYSELSEATNEF---------SSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM-QKGALKSFVAECEVLRNT 733 (997)
Q Consensus 667 ~~~~~~~~~~~~~~~---------~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l 733 (997)
...+++|.-++..+| .+.++||.|.||+||+|+.+..|+ .||||.++.. .+.+..+|..|+.||.++
T Consensus 608 DP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQF 687 (996)
T KOG0196|consen 608 DPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQF 687 (996)
T ss_pred CCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccC
Confidence 345666666655544 467899999999999999986664 6999999854 456778999999999999
Q ss_pred CCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEe
Q 001908 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVH 813 (997)
Q Consensus 734 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivH 813 (997)
+||||+++.|+. .....++||+|||++|+|+.||++.+++ +.+.+...+.++|+.||+||-+. ++||
T Consensus 688 dHPNIIrLEGVV-----Tks~PvMIiTEyMENGsLDsFLR~~DGq-----ftviQLVgMLrGIAsGMkYLsdm---~YVH 754 (996)
T KOG0196|consen 688 DHPNIIRLEGVV-----TKSKPVMIITEYMENGSLDSFLRQNDGQ-----FTVIQLVGMLRGIASGMKYLSDM---NYVH 754 (996)
T ss_pred CCCcEEEEEEEE-----ecCceeEEEhhhhhCCcHHHHHhhcCCc-----eEeehHHHHHHHHHHHhHHHhhc---Cchh
Confidence 999999999994 4456899999999999999999998754 88889999999999999999999 9999
Q ss_pred cCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchh
Q 001908 814 GDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDV 893 (997)
Q Consensus 814 rDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dv 893 (997)
|||.++||||+.+-.+|++|||+++.+.+++. .......-.-+..|.|||.+. ..+++.++||
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~~-----~~ytt~GGKIPiRWTAPEAIa------------~RKFTsASDV 817 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPE-----AAYTTLGGKIPIRWTAPEAIA------------YRKFTSASDV 817 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCCC-----ccccccCCccceeecChhHhh------------hcccCchhhc
Confidence 99999999999999999999999997643321 111111122356899996554 6889999999
Q ss_pred HHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCC
Q 001908 894 YSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESP 972 (997)
Q Consensus 894 wSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 972 (997)
|||||||||.++ |.+||-++... ......+++++.+-+.+||..+.+||..||++|-
T Consensus 818 WSyGIVmWEVmSyGERPYWdmSNQ----------------------dVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR 875 (996)
T KOG0196|consen 818 WSYGIVMWEVMSYGERPYWDMSNQ----------------------DVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDR 875 (996)
T ss_pred cccceEEEEecccCCCcccccchH----------------------HHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHh
Confidence 999999999887 99998755322 1222335667778888999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHH
Q 001908 973 IERMEMRDVLAKLCAAR 989 (997)
Q Consensus 973 ~~Rps~~evl~~L~~~~ 989 (997)
.+||.+.||+..|.++.
T Consensus 876 ~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 876 NRRPKFAQIVSTLDKLI 892 (996)
T ss_pred hcCCCHHHHHHHHHHHh
Confidence 99999999999999864
No 23
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=9.9e-40 Score=322.29 Aligned_cols=269 Identities=24% Similarity=0.355 Sum_probs=206.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.+|...+++|+|.||.||+|++..+|+.||||+++.. .++......+||+.|+.++|+||+.++++ |...+..
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~-----F~~~~~l 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDV-----FPHKSNL 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhh-----ccCCCce
Confidence 4678889999999999999999999999999999743 33345678999999999999999999999 5667789
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
.+|+|||+. +|+..++... ..+...++..++.++++|++|+|++ .|.||||||.|+|++++|.+||+|||+
T Consensus 77 ~lVfEfm~t-dLe~vIkd~~-----i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGL 147 (318)
T KOG0659|consen 77 SLVFEFMPT-DLEVVIKDKN-----IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGL 147 (318)
T ss_pred EEEEEeccc-cHHHHhcccc-----cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccc
Confidence 999999965 9999998765 3588999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+...++. ......+-|.+|+|||.+-+ ...|+..+||||.|||+.||+-|.+-|. +
T Consensus 148 Ar~f~~p~--------~~~~~~V~TRWYRAPELLfG-----------sr~Yg~~VDmWavGCI~AELllr~P~fp----G 204 (318)
T KOG0659|consen 148 ARFFGSPN--------RIQTHQVVTRWYRAPELLFG-----------SRQYGTGVDMWAVGCIFAELLLRVPFFP----G 204 (318)
T ss_pred hhccCCCC--------cccccceeeeeccChHHhcc-----------chhcCCcchhhhHHHHHHHHHccCCCCC----C
Confidence 99874432 22233378999999976643 3568999999999999999998766543 3
Q ss_pred CccHHHHHHhh--c----chhhhhhc---CcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 917 GLTLHEFCKMA--L----PEKVMETV---DPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 917 ~~~~~~~~~~~--~----~~~~~~~~---d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..++++..... + ++.+.+.. |-.....+...........+..+..+++..|+..||.+|++++|+++.
T Consensus 205 ~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 205 DSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred CchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 44555443321 1 11222111 111011111111111112234556899999999999999999999864
No 24
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.1e-40 Score=349.90 Aligned_cols=275 Identities=24% Similarity=0.354 Sum_probs=207.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+.|+..++||+|+||.||+|++..+|+.||+|+++.. .++......+||.+|++++||||+++.+...+. ....
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~---~~~s 192 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK---LSGS 192 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec---CCce
Confidence 34677889999999999999999999999999999744 355667889999999999999999999987643 2468
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
+|+|+|||+. ||.-++.... ..++..++..++.|++.||+|+|++ +|.|||||.+|||||.+|.+||+|||
T Consensus 193 iYlVFeYMdh-DL~GLl~~p~-----vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 193 IYLVFEYMDH-DLSGLLSSPG-----VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred EEEEEecccc-hhhhhhcCCC-----cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 9999999955 9999887643 3589999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+++.... ....+..+-|.+|+|||.+-. ...|+.++|+||.|||+.||++|++.|....+
T Consensus 264 LAr~y~~~~-------~~~~T~rVvTLWYRpPELLLG-----------~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tE 325 (560)
T KOG0600|consen 264 LARFYTPSG-------SAPYTSRVVTLWYRPPELLLG-----------ATSYGTAVDLWSVGCILAELFLGKPILQGRTE 325 (560)
T ss_pred ceeeccCCC-------CcccccceEEeeccChHHhcC-----------CcccccceeehhhhHHHHHHHcCCCCcCCccH
Confidence 999763321 122445678999999987764 35699999999999999999999999874321
Q ss_pred CCccHHHHHHhh-cc-hhhhhhcCcccccccc--cchh---hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMA-LP-EKVMETVDPSLLLAWS--DGRR---RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~~--~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
- ..++...+.. .| +..+...+--....+. ..+. .......+....+|+..++..||.+|.|+.++++
T Consensus 326 v-eQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 326 V-EQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred H-HHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 1 1111111111 11 1111111111101111 0111 1112334567789999999999999999999874
No 25
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=386.26 Aligned_cols=270 Identities=27% Similarity=0.466 Sum_probs=221.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc-----EEEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT-----FVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
...+..+.||+|+||.||.|...+... .||||.++. .+.+...+|.+|..+|+.++|||||+++|+|..
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~----- 766 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLD----- 766 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecC-----
Confidence 455677899999999999999864333 389999874 456677899999999999999999999999854
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCC-cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPE-VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
....++++|||++|+|..||++.+.... ...+.....+.++.|||+|+.||+++ ++|||||.++|+|++...+|||
T Consensus 767 ~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKI 843 (1025)
T KOG1095|consen 767 SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKI 843 (1025)
T ss_pred CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEE
Confidence 4578999999999999999998743221 23588999999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+|+.+....+..... ...-+..|||||.+. ++.++.|+|||||||++||++| |..||
T Consensus 844 aDFGlArDiy~~~yyr~~~------~a~lPvkWm~PEsl~------------d~iFtskSDvWsFGVllWEifslG~~PY 905 (1025)
T KOG1095|consen 844 ADFGLARDIYDKDYYRKHG------EAMLPVKWMPPESLK------------DGIFTSKSDVWSFGVLLWEIFSLGATPY 905 (1025)
T ss_pred cccchhHhhhhchheeccC------ccccceecCCHHHHh------------hcccccccchhhhHHHHHHHHhCCCCCC
Confidence 9999999776554433211 123456899996654 5889999999999999999999 89998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
......+ +...+..+++.+.+..|+..++++|..||+.+|++||++..+++++.++.+
T Consensus 906 ~~~~n~~----------------------v~~~~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~ 963 (1025)
T KOG1095|consen 906 PSRSNFE----------------------VLLDVLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISN 963 (1025)
T ss_pred CCcchHH----------------------HHHHHHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhh
Confidence 7432110 111122344667788999999999999999999999999999999999988
Q ss_pred HhhccC
Q 001908 991 TLVGRL 996 (997)
Q Consensus 991 ~~~~~~ 996 (997)
+..+.+
T Consensus 964 ~~~~~~ 969 (1025)
T KOG1095|consen 964 AALGTI 969 (1025)
T ss_pred hhccCc
Confidence 776543
No 26
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-41 Score=360.67 Aligned_cols=382 Identities=21% Similarity=0.231 Sum_probs=343.3
Q ss_pred cccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCccc
Q 001908 205 QFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVS 284 (997)
Q Consensus 205 ~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 284 (997)
++.|.+|. .-+.||+++|+++ .+....|.++++||++++.+|.++ .||.......+|+.|+|.+|.|+.+-.
T Consensus 71 ~l~g~lp~------~t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~s 142 (873)
T KOG4194|consen 71 RLKGFLPS------QTQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTS 142 (873)
T ss_pred ccCCcCcc------ceeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccH
Confidence 45566664 3457999999999 788888889999999999999999 889877777889999999999999999
Q ss_pred ccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCC
Q 001908 285 IIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPS 364 (997)
Q Consensus 285 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~ 364 (997)
+.++.++.|++||||.|.|+.++.. .+..-.++++|+|++|+|+...-..|..+. +|.+|.|+.|+|+...+.
T Consensus 143 e~L~~l~alrslDLSrN~is~i~~~------sfp~~~ni~~L~La~N~It~l~~~~F~~ln-sL~tlkLsrNrittLp~r 215 (873)
T KOG4194|consen 143 EELSALPALRSLDLSRNLISEIPKP------SFPAKVNIKKLNLASNRITTLETGHFDSLN-SLLTLKLSRNRITTLPQR 215 (873)
T ss_pred HHHHhHhhhhhhhhhhchhhcccCC------CCCCCCCceEEeeccccccccccccccccc-hheeeecccCcccccCHH
Confidence 9999999999999999999998765 344667899999999999998889999985 899999999999988888
Q ss_pred CCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCC
Q 001908 365 GIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNL 444 (997)
Q Consensus 365 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 444 (997)
.|.+|++|+.|+|..|+|.-.---.|.+|++|+.|.|..|.+...-...|..+.++++|+|+.|+++..-..++.+++.|
T Consensus 216 ~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L 295 (873)
T KOG4194|consen 216 SFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSL 295 (873)
T ss_pred HhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchh
Confidence 99999999999999999985446789999999999999999998888899999999999999999998888999999999
Q ss_pred cEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccC
Q 001908 445 VSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQG 524 (997)
Q Consensus 445 ~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (997)
+.|+||+|.|...-++.+.-.++| ++|+|++|+|+...+..|..|..|++|+|++|.++..-...|.++++|+.|||++
T Consensus 296 ~~L~lS~NaI~rih~d~WsftqkL-~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~ 374 (873)
T KOG4194|consen 296 EQLDLSYNAIQRIHIDSWSFTQKL-KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRS 374 (873)
T ss_pred hhhccchhhhheeecchhhhcccc-eeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcC
Confidence 999999999998888888888888 9999999999988889999999999999999999977778999999999999999
Q ss_pred ccccccCCh---hccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcC
Q 001908 525 NSFRGSIPL---SLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLC 600 (997)
Q Consensus 525 N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C 600 (997)
|.|++.|.. .|..|++|+.|+|.+|+|..+.-.+|.+++.|++|||.+|.+...-|.. .++ .++.+.+..-..+|
T Consensus 375 N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 375 NELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLC 453 (873)
T ss_pred CeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEE
Confidence 999987754 5888999999999999999666689999999999999999999877765 333 77888888888999
Q ss_pred CCC
Q 001908 601 GGS 603 (997)
Q Consensus 601 ~~~ 603 (997)
+|.
T Consensus 454 DCq 456 (873)
T KOG4194|consen 454 DCQ 456 (873)
T ss_pred ecc
Confidence 874
No 27
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=8.6e-39 Score=367.30 Aligned_cols=274 Identities=21% Similarity=0.269 Sum_probs=218.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEee-eeccCcCC-Cce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITV-CSSIDFKG-ADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~-~~~~~~~~-~~~ 755 (997)
.++++.+.|.+|||+.||.|+....|..||+|++-..++...+...+||++|+.|. |+|||.+++. .....-.+ ...
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~E 116 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWE 116 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeE
Confidence 45678899999999999999998777999999998778888899999999999996 9999999993 32221122 356
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
++++||||+||.|-+++.++.. ..+++.++++|+.|+++|+++||.. +|+|+|||||.+||||+.+|..||||||
T Consensus 117 vllLmEyC~gg~Lvd~mn~Rlq----~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 117 VLLLMEYCKGGSLVDFMNTRLQ----TRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred EEeehhhccCCcHHHHHHHHHh----ccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 8899999999999999997652 2489999999999999999999997 6789999999999999999999999999
Q ss_pred cchhcccCCC-CCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPF-DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
.|......+. .......+.......|+.|+|||.++ ...+.+.++|+||||+||+||.|+....||+...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID---------lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg 262 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID---------LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG 262 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh---------hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc
Confidence 9987644331 11111222334455899999999985 4556778999999999999999999999998431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.- .+++ ..+..+-...+...+.+||..||..||.+||++-||+..+.++...
T Consensus 263 ~l-----------------aIln--------g~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 263 KL-----------------AILN--------GNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANK 314 (738)
T ss_pred ce-----------------eEEe--------ccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcC
Confidence 10 0000 1111122234567889999999999999999999999999988753
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-38 Score=338.84 Aligned_cols=262 Identities=27% Similarity=0.422 Sum_probs=202.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|...+.||+|+||+||++....+|...|||..........+.+.+|+.+|++++|||||+++|...... ....++
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~---~~~~~i 93 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRE---NDEYNI 93 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCcccccc---CeeeEe
Confidence 46778899999999999999999889999999987554334677899999999999999999999632211 136899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEcccccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLA 837 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFg~a 837 (997)
+|||+++|+|.+++...++ .+++..++++++||++|++|||++ +|+||||||+|||++. ++.+||+|||.|
T Consensus 94 ~mEy~~~GsL~~~~~~~g~-----~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a 165 (313)
T KOG0198|consen 94 FMEYAPGGSLSDLIKRYGG-----KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLA 165 (313)
T ss_pred eeeccCCCcHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccc
Confidence 9999999999999998763 388999999999999999999999 9999999999999999 799999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ...........||+.|||||++.. +.....++||||+||++.||+||.+||.....
T Consensus 166 ~~~~~~-----~~~~~~~~~~~Gtp~~maPEvi~~-----------g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~-- 227 (313)
T KOG0198|consen 166 KKLESK-----GTKSDSELSVQGTPNYMAPEVIRN-----------GEVARRESDIWSLGCTVVEMLTGKPPWSEFFE-- 227 (313)
T ss_pred cccccc-----cccccccccccCCccccCchhhcC-----------CCcCCccchhhhcCCEEEeccCCCCcchhhcc--
Confidence 876320 111223345789999999977642 22334699999999999999999999874200
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
............ .-| ..+.....+..+++.+|+..||++||||.+++..-..
T Consensus 228 -~~~~~~~ig~~~-----~~P------------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 228 -EAEALLLIGRED-----SLP------------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred -hHHHHHHHhccC-----CCC------------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 011111111111 011 1122234566789999999999999999999876543
No 29
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=347.16 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=208.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
..|+...+||+|+.|.||.|....+++.||||++........+-+..|+.+|+..+|+|||.++..|. -.+..++
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Syl-----v~deLWV 347 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYL-----VGDELWV 347 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhc-----ccceeEE
Confidence 46778899999999999999999999999999998777777788899999999999999999998754 3468999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|||||++|+|.+.+.... +++.++..|++++++||+|||.+ +|+|||||.+|||++.+|.+||+|||++.
T Consensus 348 VMEym~ggsLTDvVt~~~-------~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFca 417 (550)
T KOG0578|consen 348 VMEYMEGGSLTDVVTKTR-------MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCA 417 (550)
T ss_pred EEeecCCCchhhhhhccc-------ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeee
Confidence 999999999999998764 88999999999999999999999 99999999999999999999999999998
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.+.. ........+||+.|||||+.. ...|++|+||||||++++||+-|.+||-- +.
T Consensus 418 qi~~--------~~~KR~TmVGTPYWMAPEVvt------------rk~YG~KVDIWSLGIMaIEMveGEPPYln----E~ 473 (550)
T KOG0578|consen 418 QISE--------EQSKRSTMVGTPYWMAPEVVT------------RKPYGPKVDIWSLGIMAIEMVEGEPPYLN----EN 473 (550)
T ss_pred cccc--------ccCccccccCCCCccchhhhh------------hcccCccccchhhhhHHHHHhcCCCCccC----CC
Confidence 7633 223556689999999996654 57899999999999999999999999862 11
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+....... .-..|.+ ..++.....+.+++.+|+..||++|++++|+++
T Consensus 474 PlrAlyLIa------~ng~P~l----------k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 474 PLRALYLIA------TNGTPKL----------KNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred hHHHHHHHh------hcCCCCc----------CCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 222221111 1111111 122334567889999999999999999999975
No 30
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-39 Score=312.76 Aligned_cols=281 Identities=19% Similarity=0.223 Sum_probs=220.0
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.+|+|||+-||.++.-.+++.||+|++.-...+..+..++|++..++++|||++++++++....-......
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999999988999999999976666777889999999999999999999999766544456779
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+++.|+..|+|.+.++..... +..+++.++++|+.+|++||++||+.. |+++||||||.||++.+.+.+++.|||.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~k--g~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIK--GNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEeehhccccHHHHHHHHhhc--CCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 9999999999999999976532 335899999999999999999999983 3699999999999999999999999999
Q ss_pred chhcccCCCCCccc-cccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 837 ARFLFARPFDTSME-TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++...-........ .........-|..|+|||.+. +-.+...+.++|||||||++|+|+.|..||+...+
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~---------vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~ 246 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN---------VKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQ 246 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchhee---------cccCcccccccchhhhhHHHHHHHHcCCcchHHhh
Confidence 98753211111100 111122344688999999885 34567789999999999999999999999985544
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.+..+.-. +..+.+ ..+........+.+++++|++.||.+||++.+++..+.++
T Consensus 247 ~GgSlaLA-----------v~n~q~--------s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 247 QGGSLALA-----------VQNAQI--------SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred cCCeEEEe-----------eecccc--------ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 33222110 000010 0111111456788999999999999999999999988765
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=318.46 Aligned_cols=199 Identities=29% Similarity=0.424 Sum_probs=178.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|+..+.||.|+||+|.+++.+.+|..+|+|+++.. ...+.++...|..+|+.+.||.++++++. +.+.+
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t-----~~d~~ 117 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT-----FKDNS 117 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe-----eccCC
Confidence 35788999999999999999999999999999999743 34556788899999999999999999988 55677
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
+.||||||++||.|..++++.+ .++...++.+|.||+.|++|||+. +|++||+||+|||+|.+|.+||+||
T Consensus 118 ~lymvmeyv~GGElFS~Lrk~~------rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDF 188 (355)
T KOG0616|consen 118 NLYMVMEYVPGGELFSYLRKSG------RFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDF 188 (355)
T ss_pred eEEEEEeccCCccHHHHHHhcC------CCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEec
Confidence 9999999999999999999876 488889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
|+|+.+.. .....||||.|+|||++. ..+|..++|.|||||++|||+.|.+||.+.
T Consensus 189 GFAK~v~~-----------rT~TlCGTPeYLAPEii~------------sk~ynkavDWWalGVLIYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 189 GFAKRVSG-----------RTWTLCGTPEYLAPEIIQ------------SKGYNKAVDWWALGVLIYEMLAGYPPFYDD 244 (355)
T ss_pred cceEEecC-----------cEEEecCCccccChHHhh------------cCCCCcchhHHHHHHHHHHHHcCCCCCcCC
Confidence 99997632 245679999999996654 678999999999999999999999999843
No 32
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=3.5e-38 Score=355.14 Aligned_cols=269 Identities=23% Similarity=0.380 Sum_probs=204.0
Q ss_pred HhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
..++|++.++||+|+||.||+|.+ +.+++.||||+++.. .....+.+.+|+++++++ +||||++++++|..
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~-- 82 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTK-- 82 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecC--
Confidence 456899999999999999999975 234568999998743 233456789999999999 89999999998743
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCC--------------------------------------------------
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQP-------------------------------------------------- 779 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------------------------------------------- 779 (997)
.....++||||+++|+|.+++.......
T Consensus 83 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (338)
T cd05102 83 --PNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPP 160 (338)
T ss_pred --CCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccc
Confidence 2346899999999999999998643110
Q ss_pred ------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcccccc
Q 001908 780 ------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQS 853 (997)
Q Consensus 780 ------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~ 853 (997)
....+++..+.+++.||++||+|||++ +|+||||||+||+++.++.+||+|||+|+....... ..
T Consensus 161 ~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~------~~ 231 (338)
T cd05102 161 QETDDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD------YV 231 (338)
T ss_pred hhccccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc------hh
Confidence 012477888999999999999999999 999999999999999999999999999986532111 11
Q ss_pred ccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhh
Q 001908 854 SSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKV 932 (997)
Q Consensus 854 ~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 932 (997)
......++..|+|||++. +..++.++|||||||++|||++ |..||...... ..+.....
T Consensus 232 ~~~~~~~~~~y~aPE~~~------------~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~----~~~~~~~~---- 291 (338)
T cd05102 232 RKGSARLPLKWMAPESIF------------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN----EEFCQRLK---- 291 (338)
T ss_pred cccCCCCCccccCcHHhh------------cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc----HHHHHHHh----
Confidence 112234678899996553 5678999999999999999997 99998743211 11111000
Q ss_pred hhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 933 METVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 933 ~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
....+ ..+..+++++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 292 -~~~~~------------~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 292 -DGTRM------------RAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred -cCCCC------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 00000 01123355788999999999999999999999999988753
No 33
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.9e-38 Score=341.15 Aligned_cols=247 Identities=30% Similarity=0.483 Sum_probs=206.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|.+.+.||+|.||+||||+.+.+.+.||+|.+.+. .+.+.+.+.+|+++++.++||||+.++++ |+...+.
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~es-----fEt~~~~ 76 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLES-----FETSAHL 76 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHh-----hcccceE
Confidence 4788899999999999999999999999999999744 34457789999999999999999999998 7778899
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++|+||+.| +|..++.... .+++..++.++.+++.|+.|||+. +|.|||+||+||+++.+|++|++|||+
T Consensus 77 ~vVte~a~g-~L~~il~~d~------~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~ 146 (808)
T KOG0597|consen 77 WVVTEYAVG-DLFTILEQDG------KLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGL 146 (808)
T ss_pred EEEehhhhh-hHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhh
Confidence 999999966 9999999876 478889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+.+.. .........|||.|||||+. .+++|+..+|+||+|||+||+.+|++||...
T Consensus 147 Ar~m~~--------~t~vltsikGtPlYmAPElv------------~e~pyd~~sDlWslGcilYE~~~G~PPF~a~--- 203 (808)
T KOG0597|consen 147 ARAMST--------NTSVLTSIKGTPLYMAPELV------------EEQPYDHTSDLWSLGCILYELYVGQPPFYAR--- 203 (808)
T ss_pred hhhccc--------CceeeeeccCcccccCHHHH------------cCCCccchhhHHHHHHHHHHHhcCCCCchHH---
Confidence 987622 23345567899999999655 4689999999999999999999999999732
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+.+.++....+. +.+ +......+..++...+..||..|.+..+++.
T Consensus 204 --si~~Lv~~I~~d~----v~~--------------p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 204 --SITQLVKSILKDP----VKP--------------PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred --HHHHHHHHHhcCC----CCC--------------cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 2333333332211 111 1123445678888999999999999998864
No 34
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=343.07 Aligned_cols=265 Identities=25% Similarity=0.450 Sum_probs=221.4
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
++++-...+..+.++||-|.||.||.|.|+...-.||||.++.. ....++|.+|+.+|+.++|||+|+++|+|..
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~---- 334 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTH---- 334 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhcc----
Confidence 44555566788899999999999999999988889999999743 4567899999999999999999999999864
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
+...|||+|||..|+|.+|+++.... .++....+.+|.||+.||+||..+ .+||||+.++|+|+.++..|||
T Consensus 335 -EpPFYIiTEfM~yGNLLdYLRecnr~----ev~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKv 406 (1157)
T KOG4278|consen 335 -EPPFYIITEFMCYGNLLDYLRECNRS----EVPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKV 406 (1157)
T ss_pred -CCCeEEEEecccCccHHHHHHHhchh----hcchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEe
Confidence 34789999999999999999987633 366778899999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+++.+..+.+ .......-+..|.|||.+. ...++.|+|||+|||+|||+.| |..||
T Consensus 407 ADFGLsRlMtgDTY-------TAHAGAKFPIKWTAPEsLA------------yNtFSiKSDVWAFGVLLWEIATYGMsPY 467 (1157)
T KOG4278|consen 407 ADFGLSRLMTGDTY-------TAHAGAKFPIKWTAPESLA------------YNTFSIKSDVWAFGVLLWEIATYGMSPY 467 (1157)
T ss_pred eccchhhhhcCCce-------ecccCccCcccccCccccc------------ccccccchhhHHHHHHHHHHHhcCCCCC
Confidence 99999998854332 2222233467899997665 4678999999999999999999 88887
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
... ++.+. ++..+.++++..++.|++.+++||.+||++.|.+||++.|+.+.++.+.+
T Consensus 468 PGi-----dlSqV-----------------Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 468 PGI-----DLSQV-----------------YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred CCc-----cHHHH-----------------HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 632 22222 12234566777889999999999999999999999999999999987543
No 35
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.4e-38 Score=338.32 Aligned_cols=260 Identities=22% Similarity=0.309 Sum_probs=200.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|+..++||+|+||.||.|+-+.+|..+|+|++++. ..++++..+.|-.+|...++|.||+++.. |++.
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs-----FQD~ 213 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS-----FQDK 213 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE-----ecCC
Confidence 447899999999999999999999999999999999743 35567888999999999999999999976 7888
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+++|+||||.+|||+..+|...+ .++...+..++.+++.|++.+|.. ||+||||||+|+|||..|++||+|
T Consensus 214 ~~LYLiMEylPGGD~mTLL~~~~------~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSD 284 (550)
T KOG0605|consen 214 EYLYLIMEYLPGGDMMTLLMRKD------TLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSD 284 (550)
T ss_pred CeeEEEEEecCCccHHHHHHhcC------cCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecc
Confidence 99999999999999999999877 478888889999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCC-----------------CCcccc----------------------ccccccccccccccCCcchhccc
Q 001908 834 FGLARFLFARPF-----------------DTSMET----------------------QSSSIGIKGTVGYVPPGNIAKML 874 (997)
Q Consensus 834 Fg~a~~~~~~~~-----------------~~~~~~----------------------~~~~~~~~gt~~y~aPE~l~~~~ 874 (997)
||++.-+..... ...... .......+|||.|||||++
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVl---- 360 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVL---- 360 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHH----
Confidence 999864421000 000000 0111235699999999655
Q ss_pred ccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHH
Q 001908 875 NLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVE 954 (997)
Q Consensus 875 ~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 954 (997)
.+..|+..+|+||+|||+|||+.|.+||...... ......+... ..+.... ..
T Consensus 361 --------l~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~-~T~rkI~nwr--~~l~fP~----------------~~ 413 (550)
T KOG0605|consen 361 --------LGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQ-ETYRKIVNWR--ETLKFPE----------------EV 413 (550)
T ss_pred --------hcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHh--hhccCCC----------------cC
Confidence 4678999999999999999999999999843211 1111111111 0010111 11
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC---HHHHH
Q 001908 955 ECLVTVIRIGVACSMESPIERME---MRDVL 982 (997)
Q Consensus 955 ~~~~~l~~li~~cl~~dP~~Rps---~~evl 982 (997)
.+..+-.++|.+|+. ||+.|.. ++||.
T Consensus 414 ~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK 443 (550)
T KOG0605|consen 414 DLSDEAKDLITRLLC-DPENRLGSKGAEEIK 443 (550)
T ss_pred cccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence 122455689999998 9999985 45543
No 36
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-38 Score=331.07 Aligned_cols=266 Identities=24% Similarity=0.287 Sum_probs=199.0
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------------hhhHHHHHHHHHHHhhcCCCCcceE
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------------KGALKSFVAECEVLRNTRHRNLIKI 741 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~E~~~l~~l~h~niv~l 741 (997)
...++|++.+.||+|.||.|-+|+...+++.||||++.+.. -...+..++||.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999999999999999996321 1123578999999999999999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCe
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 821 (997)
+.+..+ ...+.+|||+|||..|.+...-. ....++..++++++++++.||+|||.+ +|+||||||+|+
T Consensus 174 iEvLDD---P~s~~~YlVley~s~G~v~w~p~------d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNL 241 (576)
T KOG0585|consen 174 IEVLDD---PESDKLYLVLEYCSKGEVKWCPP------DKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNL 241 (576)
T ss_pred EEeecC---cccCceEEEEEeccCCccccCCC------CcccccHHHHHHHHHHHHHHHHHHHhc---Ceeccccchhhe
Confidence 998654 34678999999998877643211 112388999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHH
Q 001908 822 LLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901 (997)
Q Consensus 822 ll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ 901 (997)
|++++|+|||+|||.+......... ..........|||.|+|||....-. .....+.+.||||+||+||
T Consensus 242 Ll~~~g~VKIsDFGVs~~~~~~~~~---~~d~~L~~tvGTPAF~APE~c~~~~--------~~~~~g~a~DiWalGVTLY 310 (576)
T KOG0585|consen 242 LLSSDGTVKISDFGVSNEFPQGSDE---GSDDQLSRTVGTPAFFAPELCSGGN--------SFSYSGFALDIWALGVTLY 310 (576)
T ss_pred EEcCCCcEEeeccceeeecccCCcc---ccHHHHhhcCCCccccchHhhcCCC--------CccccchhhhhhhhhhhHH
Confidence 9999999999999999765322111 1122233378999999998765311 0122467889999999999
Q ss_pred HHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 902 EMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 902 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
.|+.|+.||.+.+ .-+..... +...+. .+...+.-..+.+||.+++.+||+.|.+..+|
T Consensus 311 CllfG~~PF~~~~-----~~~l~~KI--------vn~pL~--------fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~i 369 (576)
T KOG0585|consen 311 CLLFGQLPFFDDF-----ELELFDKI--------VNDPLE--------FPENPEINEDLKDLIKRLLEKDPEQRITLPDI 369 (576)
T ss_pred HhhhccCCcccch-----HHHHHHHH--------hcCccc--------CCCcccccHHHHHHHHHHhhcChhheeehhhh
Confidence 9999999997431 11111111 111110 01111234567799999999999999999998
Q ss_pred HHHH
Q 001908 982 LAKL 985 (997)
Q Consensus 982 l~~L 985 (997)
....
T Consensus 370 k~Hp 373 (576)
T KOG0585|consen 370 KLHP 373 (576)
T ss_pred eecc
Confidence 6543
No 37
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=335.56 Aligned_cols=279 Identities=27% Similarity=0.382 Sum_probs=207.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhh--cCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
....+..+.||+|+||.||||+. .++.||||++... ..+.|..|-++.+. ++|+||++++++-...+ ...-.
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t-~~~~e 282 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGT-ADRME 282 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--cCceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCC-ccccc
Confidence 34556678999999999999999 5799999998643 44778888888776 58999999998733221 11346
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCcEecCCCCCCeeeCCCCcE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------QPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.++|+||.+.|+|.+|++... .+|....+|+..+++||+|||+.. +|+|+|||||++||||.+|+++
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt-------isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTc 355 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT-------ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTC 355 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc-------ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcE
Confidence 899999999999999999876 899999999999999999999754 6799999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
.|+|||+|..+.+... . ......+||..|||||++.+..++.. ...=.+.||||+|.|+|||+++..-
T Consensus 356 cIaDFGLAl~~~p~~~-----~-~d~~~qVGT~RYMAPEvLEgainl~d------~~Afkr~DvYamgLVLWEi~SRC~~ 423 (534)
T KOG3653|consen 356 CIADFGLALRLEPGKP-----Q-GDTHGQVGTRRYMAPEVLEGAINLQD------RDAFKRIDVYAMGLVLWEIASRCTD 423 (534)
T ss_pred EeeccceeEEecCCCC-----C-cchhhhhhhhhhcCHHHHhhhccccc------HHHHHHHHHHHHHHHHHHHHhhccc
Confidence 9999999998853221 1 12233789999999999987554321 2233468999999999999986432
Q ss_pred CC--------cCcC----CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 910 TN--------CMFQ----GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 910 ~~--------~~~~----~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++ ..++ ....++++-.... .+..+|.+...|.. ...+..+.+.+..||.+||+.|.|
T Consensus 424 ~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV----~kK~RP~~p~~W~~-------h~~~~~l~et~EeCWDhDaeARLT 492 (534)
T KOG3653|consen 424 ADPGPVPEYQLPFEAEVGNHPTLEEMQELVV----RKKQRPKIPDAWRK-------HAGMAVLCETIEECWDHDAEARLT 492 (534)
T ss_pred ccCCCCCcccCchhHHhcCCCCHHHHHHHHH----hhccCCCChhhhhc-------CccHHHHHHHHHHHcCCchhhhhh
Confidence 21 1111 1122232222111 12223333333322 134567889999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 001908 978 MRDVLAKLCAARQTL 992 (997)
Q Consensus 978 ~~evl~~L~~~~~~~ 992 (997)
+.=|.+++.++....
T Consensus 493 A~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 493 AGCVEERMAELMMLW 507 (534)
T ss_pred hHHHHHHHHHHhccC
Confidence 999999998876543
No 38
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-38 Score=327.04 Aligned_cols=278 Identities=23% Similarity=0.297 Sum_probs=210.8
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEec--ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.+....|...+.||+|+||.|++|.++.+|+.||+|++. .......++..+|+++++.++|+||+.+.++........
T Consensus 18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~ 97 (359)
T KOG0660|consen 18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDK 97 (359)
T ss_pred EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccc
Confidence 344556777899999999999999999999999999986 445556678899999999999999999999977644445
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
-..+|+|+|+| +.+|.+.++.+. .++..++..+.+|+++|++|+|+. +|+|||+||+|++++.+...||+
T Consensus 98 f~DvYiV~elM-etDL~~iik~~~------~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~ 167 (359)
T KOG0660|consen 98 FNDVYLVFELM-ETDLHQIIKSQQ------DLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKIC 167 (359)
T ss_pred cceeEEehhHH-hhHHHHHHHcCc------cccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEec
Confidence 56799999999 669999999875 478889999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+..... ......+.++.|.+|+|||++.. ...|+.+.||||.|||+.||++|++-|.+
T Consensus 168 DFGLAR~~~~~------~~~~~mTeYVaTRWYRAPElll~-----------~~~Yt~aiDiWSvGCI~AEmL~gkplFpG 230 (359)
T KOG0660|consen 168 DFGLARYLDKF------FEDGFMTEYVATRWYRAPELLLN-----------SSEYTKAIDIWSVGCILAEMLTGKPLFPG 230 (359)
T ss_pred cccceeecccc------CcccchhcceeeeeecCHHHHhc-----------cccccchhhhhhhhHHHHHHHcCCCCCCC
Confidence 99999976332 22334466789999999998754 46799999999999999999999998874
Q ss_pred CcCCCccHHHHHH--hhcc---hhhhhhcCcc-c---ccccccchhhh---hHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 913 MFQGGLTLHEFCK--MALP---EKVMETVDPS-L---LLAWSDGRRRA---KVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 913 ~~~~~~~~~~~~~--~~~~---~~~~~~~d~~-~---~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
.. .+++... ..++ +.....+... . ........+.+ ......+.-.+++.+|+..||.+|+|+.|
T Consensus 231 ~d----~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e 306 (359)
T KOG0660|consen 231 KD----YVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE 306 (359)
T ss_pred Cc----hHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence 32 1222111 1111 1111111100 0 00000000011 11123345679999999999999999999
Q ss_pred HHH
Q 001908 981 VLA 983 (997)
Q Consensus 981 vl~ 983 (997)
+++
T Consensus 307 AL~ 309 (359)
T KOG0660|consen 307 ALA 309 (359)
T ss_pred Hhc
Confidence 975
No 39
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-38 Score=344.48 Aligned_cols=247 Identities=21% Similarity=0.313 Sum_probs=205.9
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
-|+.++.||.|+.|.|..|++..+|+.+|||++... .+.....+.+||.+|+-+.||||+++|++ |++..++
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydV-----we~~~~l 87 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDV-----WENKQHL 87 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeee-----eccCceE
Confidence 478889999999999999999999999999999754 22334567889999999999999999999 6778899
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+|.||+++|.|.+++..++ ++.+.+..++++||+.|+.|+|+. +|+|||+||+|+|+|..+.+||+|||+
T Consensus 88 ylvlEyv~gGELFdylv~kG------~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGM 158 (786)
T KOG0588|consen 88 YLVLEYVPGGELFDYLVRKG------PLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGM 158 (786)
T ss_pred EEEEEecCCchhHHHHHhhC------CCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccce
Confidence 99999999999999999887 477889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
|..-. .+......||+++|.|||++ .|.+| +.++||||.|||+|.|+||+.||++
T Consensus 159 AsLe~---------~gklLeTSCGSPHYA~PEIV------------~G~pYdG~~sDVWSCGVILfALLtG~LPFdD--- 214 (786)
T KOG0588|consen 159 ASLEV---------PGKLLETSCGSPHYAAPEIV------------SGRPYDGRPSDVWSCGVILFALLTGKLPFDD--- 214 (786)
T ss_pred eeccc---------CCccccccCCCcccCCchhh------------cCCCCCCCccccchhHHHHHHHHhCCCCCCC---
Confidence 97542 23344567999999999655 45666 5689999999999999999999983
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.++........... ..++.+.+.+..+|+.+|+..||++|.|++||.+.
T Consensus 215 --dNir~LLlKV~~G~------------------f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 215 --DNIRVLLLKVQRGV------------------FEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred --ccHHHHHHHHHcCc------------------ccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 23444332221111 11223445677799999999999999999999864
No 40
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-38 Score=340.99 Aligned_cols=246 Identities=28% Similarity=0.418 Sum_probs=202.0
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
...+-||.|+.|.||+|+. .++.||||+++.-. ..+|+-|++++|+||+.|.|+|.... ..|||||
T Consensus 127 sELeWlGSGaQGAVF~Grl--~netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP-----cyCIiME 192 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--HNETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP-----CYCIIME 192 (904)
T ss_pred hhhhhhccCcccceeeeec--cCceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc-----eeEEeee
Confidence 3457899999999999999 57889999875332 23678899999999999999997543 7899999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
||+.|-|++.++... ++.......|..+||.||.|||.+ .|||||+|+-||||+.+..|||+|||-++...
T Consensus 193 fCa~GqL~~VLka~~------~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~ 263 (904)
T KOG4721|consen 193 FCAQGQLYEVLKAGR------PITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKELS 263 (904)
T ss_pred ccccccHHHHHhccC------ccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHhhh
Confidence 999999999999876 477778889999999999999999 99999999999999999999999999998762
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 921 (997)
.......++||..|||||++. ..+++.|+||||||||||||+||..||.+....
T Consensus 264 ---------~~STkMSFaGTVaWMAPEvIr------------nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----- 317 (904)
T KOG4721|consen 264 ---------DKSTKMSFAGTVAWMAPEVIR------------NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----- 317 (904)
T ss_pred ---------hhhhhhhhhhhHhhhCHHHhh------------cCCcccccceehhHHHHHHHHhcCCCccccchh-----
Confidence 223456689999999997665 478899999999999999999999998732110
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
. -++.+ -...-..+.+..|+.-+.-|+++||+-.|..||++++++..|.-..+++
T Consensus 318 A--------IIwGV--------GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pel 372 (904)
T KOG4721|consen 318 A--------IIWGV--------GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPEL 372 (904)
T ss_pred e--------eEEec--------cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHH
Confidence 0 00011 1111234567788999999999999999999999999999887554443
No 41
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=337.35 Aligned_cols=249 Identities=24% Similarity=0.343 Sum_probs=202.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
..|+..+.||+|.||.||+|.+..+++.||+|++... .+.+.+++++|+.++.+++++||.++|+.+. ....++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl-----~g~~Lw 87 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYL-----KGTKLW 87 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhee-----ecccHH
Confidence 4577779999999999999999999999999999843 4556788999999999999999999999854 345899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++||||.||++.+.++... .+++..+.-+.+++..|+.|||++ +.+|||||+.||++..+|.||++|||.|
T Consensus 88 iiMey~~gGsv~~lL~~~~------~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa 158 (467)
T KOG0201|consen 88 IIMEYCGGGSVLDLLKSGN------ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVA 158 (467)
T ss_pred HHHHHhcCcchhhhhccCC------CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEeccee
Confidence 9999999999999998765 236667777899999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
..+.. .......++||+.|||||++. +..|+.|+||||||++.+||++|.+|+.....
T Consensus 159 ~ql~~--------~~~rr~tfvGTPfwMAPEVI~------------~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-- 216 (467)
T KOG0201|consen 159 GQLTN--------TVKRRKTFVGTPFWMAPEVIK------------QSGYDTKADIWSLGITAIELAKGEPPHSKLHP-- 216 (467)
T ss_pred eeeec--------hhhccccccccccccchhhhc------------cccccchhhhhhhhHHHHHHhcCCCCCcccCc--
Confidence 87632 222336689999999996664 57899999999999999999999999863311
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
-++...+.+. ........+.+.+.+++..|+..||+.||+|.++++
T Consensus 217 ------------mrvlflIpk~--------~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 217 ------------MRVLFLIPKS--------APPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred ------------ceEEEeccCC--------CCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1111111111 011111245667899999999999999999999976
No 42
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-37 Score=337.52 Aligned_cols=262 Identities=24% Similarity=0.407 Sum_probs=220.9
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCC----CcEEEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGEN----GTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~~vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
+...+..+..+.||+|-||.||+|.+... .-.||||.-+. ......+.|..|+.+|++++||||++++|+|.+
T Consensus 385 el~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-- 462 (974)
T KOG4257|consen 385 ELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-- 462 (974)
T ss_pred eeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec--
Confidence 33445566778999999999999998532 23588898875 445567899999999999999999999999875
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
...++|||.++-|.|..|++.+.. .++......++.||+.||+|||+. .+|||||.++|||+.+...|
T Consensus 463 ----~P~WivmEL~~~GELr~yLq~nk~-----sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CV 530 (974)
T KOG4257|consen 463 ----QPMWIVMELAPLGELREYLQQNKD-----SLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCV 530 (974)
T ss_pred ----cceeEEEecccchhHHHHHHhccc-----cchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCccee
Confidence 358999999999999999998763 478888999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRR 908 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~ 908 (997)
|++|||+++.+....+..+ ....-+..|||||.+. -.+++.++|||-|||++||++. |..
T Consensus 531 KLaDFGLSR~~ed~~yYka-------S~~kLPIKWmaPESIN------------fRrFTtASDVWMFgVCmWEIl~lGvk 591 (974)
T KOG4257|consen 531 KLADFGLSRYLEDDAYYKA-------SRGKLPIKWMAPESIN------------FRRFTTASDVWMFGVCMWEILSLGVK 591 (974)
T ss_pred eecccchhhhccccchhhc-------cccccceeecCccccc------------hhcccchhhHHHHHHHHHHHHHhcCC
Confidence 9999999998755444332 1233467899996554 5789999999999999999998 999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
||.+.. ........+.+.+.+.+..||+.++.++.+||.+||.+||++.|+...|.++
T Consensus 592 Pfqgvk----------------------NsDVI~~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv 649 (974)
T KOG4257|consen 592 PFQGVK----------------------NSDVIGHIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDV 649 (974)
T ss_pred cccccc----------------------ccceEEEecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHH
Confidence 987432 2334455677888899999999999999999999999999999999999999
Q ss_pred HHH
Q 001908 989 RQT 991 (997)
Q Consensus 989 ~~~ 991 (997)
.++
T Consensus 650 ~qe 652 (974)
T KOG4257|consen 650 LQE 652 (974)
T ss_pred HHH
Confidence 873
No 43
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-37 Score=343.66 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=201.2
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc----ch-hhHHHHHHHHHHHhhcC-CCCcceEEeeeeccC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM----QK-GALKSFVAECEVLRNTR-HRNLIKIITVCSSID 749 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~----~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~ 749 (997)
.....|.+.+.||+|+||.|+.|....+++.||+|+++.. .. ...+.+.+|+.++++++ ||||++++.++
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~---- 89 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF---- 89 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE----
Confidence 3456899999999999999999999999999999987643 11 23456678999999998 99999999994
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-Cc
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MV 828 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~ 828 (997)
......++||||+.+|+|.+++...+ .+.+....++++|++.|++|+|++ +|+||||||+||+++.+ ++
T Consensus 90 -~t~~~~~ivmEy~~gGdL~~~i~~~g------~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~ 159 (370)
T KOG0583|consen 90 -ATPTKIYIVMEYCSGGDLFDYIVNKG------RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGN 159 (370)
T ss_pred -ecCCeEEEEEEecCCccHHHHHHHcC------CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCC
Confidence 45567999999999999999999844 377789999999999999999999 99999999999999999 99
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-C-CccchhHHHHHHHHHHHhC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-A-SVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~-~~~~DvwSlGvvl~elltg 906 (997)
+||+|||++.... .........+||+.|+|||++.. .. | +.++||||+||++|.|++|
T Consensus 160 ~Kl~DFG~s~~~~--------~~~~~l~t~cGsp~Y~aPEvl~~------------~~~Y~g~~aDvWS~GViLy~ml~G 219 (370)
T KOG0583|consen 160 LKLSDFGLSAISP--------GEDGLLKTFCGSPAYAAPEVLSG------------KGTYSGKAADVWSLGVILYVLLCG 219 (370)
T ss_pred EEEeccccccccC--------CCCCcccCCCCCcccCCHHHhCC------------CCCcCCchhhhhhhHHHHHHHHhC
Confidence 9999999998652 12334556799999999977763 33 5 4789999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHH-HHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEEC-LVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
+.||++. ............. . ..+... .++...++.+|+..||.+|+++.+++
T Consensus 220 ~~PF~d~-----~~~~l~~ki~~~~---~---------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 220 RLPFDDS-----NVPNLYRKIRKGE---F---------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCCCCc-----cHHHHHHHHhcCC---c---------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 9999852 2222211110000 0 001111 34567899999999999999999998
No 44
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-38 Score=348.41 Aligned_cols=269 Identities=26% Similarity=0.400 Sum_probs=212.4
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCc---E-EEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEe
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGT---F-VAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIIT 743 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~-vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~ 743 (997)
...++...++....++||+|+||+||+|+.+..+. . ||||..+. .......++.+|+++|++++|||||++||
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34455555667777999999999999999974422 3 89999874 34667889999999999999999999999
Q ss_pred eeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
++.. ....|+|||+|+||+|.+++++..+ .++..++.+++.+.|+||+|||++ +++||||.++|+|+
T Consensus 229 Va~~-----~~Pl~ivmEl~~gGsL~~~L~k~~~-----~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~ 295 (474)
T KOG0194|consen 229 VAVL-----EEPLMLVMELCNGGSLDDYLKKNKK-----SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLY 295 (474)
T ss_pred EEcC-----CCccEEEEEecCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHhee
Confidence 9654 4589999999999999999998763 388999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+.++.+||+|||+++.-.. + ........-+..|+|||.+. .+.|+.++|||||||++||+
T Consensus 296 ~~~~~vKISDFGLs~~~~~--~------~~~~~~~klPirWLAPEtl~------------~~~~s~kTDV~sfGV~~~Ei 355 (474)
T KOG0194|consen 296 SKKGVVKISDFGLSRAGSQ--Y------VMKKFLKKLPIRWLAPETLN------------TGIFSFKTDVWSFGVLLWEI 355 (474)
T ss_pred cCCCeEEeCccccccCCcc--e------eeccccccCcceecChhhhc------------cCccccccchhheeeeEEee
Confidence 9999999999999875310 0 01111113467899997665 46899999999999999999
Q ss_pred Hh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 904 FT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 904 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
++ |..||...... .+...+ . ..+++.+.+...+..+..++.+||..+|++||+|.++.
T Consensus 356 f~~g~~Py~g~~~~--~v~~kI---~----------------~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~ 414 (474)
T KOG0194|consen 356 FENGAEPYPGMKNY--EVKAKI---V----------------KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIK 414 (474)
T ss_pred eccCCCCCCCCCHH--HHHHHH---H----------------hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHH
Confidence 99 88898744211 111111 0 11122222334577888999999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001908 983 AKLCAARQTLV 993 (997)
Q Consensus 983 ~~L~~~~~~~~ 993 (997)
+.++.+.+...
T Consensus 415 ~~l~~~~~~~~ 425 (474)
T KOG0194|consen 415 KKLEALEKKKE 425 (474)
T ss_pred HHHHHHHhccc
Confidence 99999877543
No 45
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.3e-38 Score=307.90 Aligned_cols=262 Identities=27% Similarity=0.379 Sum_probs=211.1
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhc-CCCCcceEEee
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNT-RHRNLIKIITV 744 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l~~~ 744 (997)
-....+.|...+.+|.|..++|.++..+.+|+.+|+|++.... ....+.-.+|+++|+++ .||+|+++.++
T Consensus 12 a~~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ 91 (411)
T KOG0599|consen 12 AKGFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDV 91 (411)
T ss_pred HhhHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeee
Confidence 3445567888999999999999999999999999999996321 11234558899999998 79999999999
Q ss_pred eeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 745 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
++.+.+.++|+|.|+.|.|.+++.+.. .+++...++|++|+.+|++|||.+ .|||||+||+|||++
T Consensus 92 -----yes~sF~FlVFdl~prGELFDyLts~V------tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILld 157 (411)
T KOG0599|consen 92 -----YESDAFVFLVFDLMPRGELFDYLTSKV------TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLD 157 (411)
T ss_pred -----ccCcchhhhhhhhcccchHHHHhhhhe------eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeec
Confidence 566778999999999999999998764 588999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
++.++||+|||+|+.+ ..+......||||+|.|||.+....+ -....|+..+|+||+|||||.++
T Consensus 158 dn~~i~isDFGFa~~l---------~~GekLrelCGTPgYLAPEtikC~m~------e~~pGYs~EVD~Wa~GVImyTLL 222 (411)
T KOG0599|consen 158 DNMNIKISDFGFACQL---------EPGEKLRELCGTPGYLAPETIKCSMY------ENHPGYSKEVDEWACGVIMYTLL 222 (411)
T ss_pred cccceEEeccceeecc---------CCchhHHHhcCCCcccChhheeeecc------cCCCCccchhhHHHHHHHHHHHH
Confidence 9999999999999987 34456677899999999999986543 23567899999999999999999
Q ss_pred hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.|.+||.... .--+.++ +++- .++ ...++-.+....+.++|.+|+..||.+|.|++|+++
T Consensus 223 aGcpPFwHRk-----QmlMLR~-----ImeG-------kyq--F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 223 AGCPPFWHRK-----QMLMLRM-----IMEG-------KYQ--FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred cCCCchhHHH-----HHHHHHH-----HHhc-------ccc--cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 9999987320 0000011 1110 000 011223344567889999999999999999999976
No 46
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-40 Score=372.66 Aligned_cols=473 Identities=26% Similarity=0.337 Sum_probs=320.7
Q ss_pred ccccccCccccccccccccccCCCCCc-cCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccc
Q 001908 90 LSPYVGNLSFLRYINLATNNFHGEIPK-EIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGY 168 (997)
Q Consensus 90 ~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~ 168 (997)
||..+..-..|+.|+++.|.+- ..|- .+...-+|+.||||+|.++ ..|..|..+..|+.|.+++|.+. .+|.+..
T Consensus 13 ip~~i~~~~~~~~ln~~~N~~l-~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~- 88 (1081)
T KOG0618|consen 13 IPEQILNNEALQILNLRRNSLL-SRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCS- 88 (1081)
T ss_pred cchhhccHHHHHhhhccccccc-cCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhh-
Confidence 4444444444555555555444 2221 1222333555555555554 55555555555555555555443 4443333
Q ss_pred cccccceeecccccccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccE
Q 001908 169 SWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQV 247 (997)
Q Consensus 169 ~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~ 247 (997)
.+.+|++|.|.+|.+. .+|.++..+. +.+|+++.|+|. .+|..+..++.++.+..++|.-...++. ..++.
T Consensus 89 ~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~------~~ik~ 160 (1081)
T KOG0618|consen 89 NMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQ------TSIKK 160 (1081)
T ss_pred hhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhcc------ccchh
Confidence 3445556666666655 5566666663 445666666665 6777777777777777777722212221 12677
Q ss_pred EEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEE
Q 001908 248 FAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLA 327 (997)
Q Consensus 248 L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~ 327 (997)
+++..|.+.+.++..+.+++. .|||++|.+. ......+.+|+.|....|+++.+.. ..++|+.|+
T Consensus 161 ~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~---~~dls~~~~l~~l~c~rn~ls~l~~----------~g~~l~~L~ 225 (1081)
T KOG0618|consen 161 LDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME---VLDLSNLANLEVLHCERNQLSELEI----------SGPSLTALY 225 (1081)
T ss_pred hhhhhhhcccchhcchhhhhe--eeecccchhh---hhhhhhccchhhhhhhhcccceEEe----------cCcchheee
Confidence 778888888888877777776 7888888876 2345677788888888888876432 356788888
Q ss_pred eecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccccccc
Q 001908 328 FEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQ 407 (997)
Q Consensus 328 L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 407 (997)
.++|.++...+... +.+|+++++++|+++ .+|++++.+.+|+.++..+|+|+ .+|..+..+++|+.|....|.++
T Consensus 226 a~~n~l~~~~~~p~---p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~ 300 (1081)
T KOG0618|consen 226 ADHNPLTTLDVHPV---PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE 300 (1081)
T ss_pred eccCcceeeccccc---cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh
Confidence 88888884433322 256888888888888 45688888889999999999886 77888888888889999999888
Q ss_pred ccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCC-CcEEecCCCcccCCcccccccccccccccccCCCcccCCCccc
Q 001908 408 GNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKN-LVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLE 486 (997)
Q Consensus 408 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~ 486 (997)
.+|.....++.|++|+|..|+|....+..|.-+.. |..|+.+.|++. ..|..-......++.|++.+|.++...-..
T Consensus 301 -yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~ 378 (1081)
T KOG0618|consen 301 -YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPV 378 (1081)
T ss_pred -hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhh
Confidence 67777888888899999999888433333333333 677777888776 455333333333377888888888777667
Q ss_pred cccccccceeccccccccccccc-cccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCC
Q 001908 487 VGNLKNLVALYISGNQFSGEIPV-TLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFL 565 (997)
Q Consensus 487 ~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 565 (997)
+.+.++|+.|+|++|+|. .+|. .+.++..|++|+||+|+++ .+|.++.+++.|++|...+|+|. ..| .+..++.|
T Consensus 379 l~~~~hLKVLhLsyNrL~-~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL 454 (1081)
T KOG0618|consen 379 LVNFKHLKVLHLSYNRLN-SFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQL 454 (1081)
T ss_pred hccccceeeeeecccccc-cCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcc
Confidence 778888888888888887 5554 5677888888888888888 77888888888888888888887 566 77788888
Q ss_pred CEEeCCCCcCcc-cCCCCCcCCCCcceeecCCCCcC
Q 001908 566 EYLNLSYNHFDG-EVPTKGVFSNKTRVQLTGNGKLC 600 (997)
Q Consensus 566 ~~L~ls~N~l~~-~~p~~~~~~~~~~~~~~~N~~~C 600 (997)
+.+|||.|+|+- .+|.....++++.++++||+|+=
T Consensus 455 ~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~ 490 (1081)
T KOG0618|consen 455 KVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLV 490 (1081)
T ss_pred eEEecccchhhhhhhhhhCCCcccceeeccCCcccc
Confidence 888888888874 33443333678888888888743
No 47
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-37 Score=318.76 Aligned_cols=247 Identities=24% Similarity=0.375 Sum_probs=207.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
-+|++.+.||+|.||.|-+|.....|+.||||.++. .+++..-.+++||++|..++||||+.++.+ |++.+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEV-----FENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV-----FENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhh-----hcCCce
Confidence 468888999999999999999988999999999864 344556678999999999999999999999 788889
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
..+||||..+|.|++|+.+.+ .+++.+.+++++||+.|+.|+|.+ +++|||+|.+|||+|.++++||+|||
T Consensus 128 IvivMEYaS~GeLYDYiSer~------~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 128 IVIVMEYASGGELYDYISERG------SLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred EEEEEEecCCccHHHHHHHhc------cccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 999999999999999999877 588899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
++..+ ........+||++-|.+||++. |.+| ++.+|-||+||++|.++.|..||+..
T Consensus 199 LSNly---------~~~kfLqTFCGSPLYASPEIvN------------G~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~- 256 (668)
T KOG0611|consen 199 LSNLY---------ADKKFLQTFCGSPLYASPEIVN------------GTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR- 256 (668)
T ss_pred hhhhh---------ccccHHHHhcCCcccCCccccC------------CCCCCCCccchhhHHHHHHHHhhcccccCCc-
Confidence 99765 2334566789999999997665 4455 57899999999999999999999843
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
+...++++.......+...|. .-.-+|.+|+..+|++|.|+.||...
T Consensus 257 ----Dhk~lvrQIs~GaYrEP~~PS-------------------dA~gLIRwmLmVNP~RRATieDiAsH 303 (668)
T KOG0611|consen 257 ----DHKRLVRQISRGAYREPETPS-------------------DASGLIRWMLMVNPERRATIEDIASH 303 (668)
T ss_pred ----hHHHHHHHhhcccccCCCCCc-------------------hHHHHHHHHHhcCcccchhHHHHhhh
Confidence 334444444333333333222 23468999999999999999998653
No 48
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-36 Score=329.42 Aligned_cols=254 Identities=24% Similarity=0.350 Sum_probs=199.0
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchh---hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG---ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
...||+|+++.||+|.+ +|+.||||+++..... ..+.+.+|++++++++||||+++++++... .......++||
T Consensus 25 ~~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~-~~~~~~~~lv~ 101 (283)
T PHA02988 25 SVLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI-VDDLPRLSLIL 101 (283)
T ss_pred CeEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec-ccCCCceEEEE
Confidence 36799999999999999 7899999999744322 256788999999999999999999987541 12345789999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.+.. .+++....+++.|++.|+.|||+.. +++||||||+||++++++++||+|||+++..
T Consensus 102 Ey~~~g~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~ 173 (283)
T PHA02988 102 EYCTRGYLREVLDKEK------DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTENYKLKIICHGLEKIL 173 (283)
T ss_pred EeCCCCcHHHHHhhCC------CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCCCcEEEcccchHhhh
Confidence 9999999999998754 4788899999999999999999742 7889999999999999999999999999865
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... .....|+..|+|||.+... ...++.++|||||||++|||++|+.||.... .
T Consensus 174 ~~~-----------~~~~~~~~~y~aPE~~~~~----------~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~-----~ 227 (283)
T PHA02988 174 SSP-----------PFKNVNFMVYFSYKMLNDI----------FSEYTIKDDIYSLGVVLWEIFTGKIPFENLT-----T 227 (283)
T ss_pred ccc-----------cccccCcccccCHHHhhhc----------cccccchhhhhHHHHHHHHHHHCCCCCCCCC-----H
Confidence 221 1124578999999876521 2568899999999999999999999997431 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
.+......... ..+ ..+..++..+.+++.+||+.||++|||++|+++.|+...+
T Consensus 228 ~~~~~~i~~~~----~~~------------~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 228 KEIYDLIINKN----NSL------------KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred HHHHHHHHhcC----CCC------------CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 12111110000 000 1112346678899999999999999999999999987653
No 49
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.9e-38 Score=324.60 Aligned_cols=270 Identities=24% Similarity=0.329 Sum_probs=200.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.|...+.+|.|+||.||+|+..++++.||||+.-.... .--+|+++|+.++|||||++..++....-.++-...+|
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 56678999999999999999999999999998754332 22469999999999999999988765432223456799
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEcccccch
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGLAR 838 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFg~a~ 838 (997)
||||+. +|.++++..... ...++...++-++.|+.+|++|||+. +|+||||||+|+|+|.+ |.+||||||.|+
T Consensus 101 leymP~-tL~~~~r~~~~~--~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK 174 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRA--NQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAK 174 (364)
T ss_pred HHhchH-HHHHHHHHHhhc--CCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcce
Confidence 999977 999999964211 11366778888999999999999998 99999999999999976 899999999999
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.+. .......+.-|..|+|||.+-+ ...|+.+.||||.|||+.||+-|++-|.+... ..
T Consensus 175 ~L~---------~~epniSYicSRyYRaPELifg-----------a~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~d 233 (364)
T KOG0658|consen 175 VLV---------KGEPNISYICSRYYRAPELIFG-----------ATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VD 233 (364)
T ss_pred eec---------cCCCceeEEEeccccCHHHHcC-----------ccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HH
Confidence 872 2333455678999999987754 34689999999999999999999998875321 12
Q ss_pred cHHHHHHhh-cc-hhhhhhcC--------cccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA-LP-EKVMETVD--------PSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~-~~-~~~~~~~d--------~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+++.++.. .| ++...... |.+....- ..-.....+++..+++.+++.++|.+|.++.|+++
T Consensus 234 QL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~---~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 234 QLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPW---HKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HHHHHHHHhCCCCHHHHhhcCcccccccCcccccccc---eeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 233333332 11 11111111 22211100 00122344567889999999999999999999875
No 50
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.8e-37 Score=311.50 Aligned_cols=273 Identities=22% Similarity=0.299 Sum_probs=202.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|+..++|++|+||.||+|+++.+++.||+|+++... .+-.-...+||.+|.+++|||||.+-.+.... .-+..
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~---~~d~i 152 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGS---NMDKI 152 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc---cccee
Confidence 57888999999999999999999999999999997433 23334568999999999999999999887643 34569
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+|||||+- ||...+.... .++...++.-++.|+++|++|||.. .|+|||+||+|+|+++.|.+||+|||+
T Consensus 153 y~VMe~~Eh-DLksl~d~m~-----q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGL 223 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMK-----QPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGL 223 (419)
T ss_pred eeeHHHHHh-hHHHHHHhcc-----CCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccch
Confidence 999999955 9999998875 2588899999999999999999999 899999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+.+..+. ...+..+-|.+|+|||.+-. ...|+++.||||+|||+.||+++++-|....+-
T Consensus 224 AR~ygsp~--------k~~T~lVVTLWYRaPELLLG-----------~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~ 284 (419)
T KOG0663|consen 224 AREYGSPL--------KPYTPLVVTLWYRAPELLLG-----------AKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEI 284 (419)
T ss_pred hhhhcCCc--------ccCcceEEEeeecCHHHhcC-----------CcccCcchhhhhHHHHHHHHHhcCCCCCCCchH
Confidence 99874431 22344678999999987754 356899999999999999999999987644321
Q ss_pred CccHHHHHHh-hcc-hhhhh-hcCcccc--cccccch----hhhhHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKM-ALP-EKVME-TVDPSLL--LAWSDGR----RRAKVEE-CLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~-~~~-~~~~~-~~d~~~~--~~~~~~~----~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
++ +...... ..| +..+. ....... ..+.... +..+... ....=++++..++.+||++|.|+.|.++
T Consensus 285 dQ-l~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 285 DQ-LDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred HH-HHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 11 1111111 111 11111 1111100 0000000 0000000 2245578999999999999999999875
No 51
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.7e-36 Score=329.21 Aligned_cols=257 Identities=24% Similarity=0.366 Sum_probs=200.3
Q ss_pred hhcCccCCcccccCcceEEEEEEC---CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|.++ ..+..||+|+++.. .....+.+.+|++++++++||||+++++++. ..
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 78 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVIT-----RG 78 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEe-----cC
Confidence 357889999999999999999874 34678999998754 2344567899999999999999999999854 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++..... .+++.+++.++.|++.|++|||++ +++||||||+||+++.++++|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~d 150 (266)
T cd05064 79 NTMMIVTEYMSNGALDSFLRKHEG-----QLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISG 150 (266)
T ss_pred CCcEEEEEeCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECC
Confidence 689999999999999999986431 478999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||.+....... ........++..|+|||.+. +..++.++|||||||++||+++ |..||..
T Consensus 151 fg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~ell~~g~~p~~~ 211 (266)
T cd05064 151 FRRLQEDKSEA-------IYTTMSGKSPVLWAAPEAIQ------------YHHFSSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred Ccccccccccc-------hhcccCCCCceeecCHHHHh------------hCCccchhHHHHHHHHHHHHhcCCCCCcCc
Confidence 99876431110 01111234567899996553 5678899999999999999775 9999874
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
... .+...... + +...+.+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 212 ~~~-----~~~~~~~~-----~------------~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 212 MSG-----QDVIKAVE-----D------------GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCH-----HHHHHHHH-----C------------CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 321 11111110 0 000111234567788999999999999999999999998764
No 52
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.1e-36 Score=341.96 Aligned_cols=264 Identities=22% Similarity=0.355 Sum_probs=200.1
Q ss_pred hhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
.++|++.++||+|+||+||+|++ ..++..||||+++.. .....+.+.+|+++++.+ +||||++++++|.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~---- 109 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACT---- 109 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeec----
Confidence 45789999999999999999975 345678999999743 233456788999999999 8999999999964
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCC----------------------------------------------------
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQ---------------------------------------------------- 778 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~---------------------------------------------------- 778 (997)
..+..++||||+++|+|.++++.....
T Consensus 110 -~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 188 (375)
T cd05104 110 -VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS 188 (375)
T ss_pred -cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence 455789999999999999999764310
Q ss_pred -----------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 779 -----------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 779 -----------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
.+...+++..+++++.||++|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~ 265 (375)
T cd05104 189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIR 265 (375)
T ss_pred cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceecc
Confidence 0112478889999999999999999999 99999999999999999999999999997652
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
.... ........++..|+|||.+ .+..++.++|||||||++|||++ |..||....... ..
T Consensus 266 ~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~-~~ 326 (375)
T cd05104 266 NDSN------YVVKGNARLPVKWMAPESI------------FNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDS-KF 326 (375)
T ss_pred Cccc------ccccCCCCCCcceeChhHh------------cCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchH-HH
Confidence 2110 0111223456789999655 35678999999999999999998 888886432211 11
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.+..... ..+ ..+...+.++.+++.+||..||++||++.|+++.|++.
T Consensus 327 ~~~~~~~--------~~~------------~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 327 YKMIKEG--------YRM------------LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred HHHHHhC--------ccC------------CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 1111100 000 00112245688999999999999999999999999863
No 53
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.5e-36 Score=332.08 Aligned_cols=268 Identities=24% Similarity=0.363 Sum_probs=198.1
Q ss_pred hhcCccCCcccccCcceEEEEEECC----------------CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE----------------NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIK 740 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~ 740 (997)
.++|++.++||+|+||.||+|.++. ++..||+|++... .......+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 3578899999999999999998642 3447999998753 2334567899999999999999999
Q ss_pred EEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCC-------------CcCCCCHHHHHHHHHHHHHHHHHHhhCC
Q 001908 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-------------EVCDLSLIQRLNIAIDMASAIEYLHHHC 807 (997)
Q Consensus 741 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-------------~~~~~~~~~~~~i~~~i~~~L~yLH~~~ 807 (997)
+++++.. .+..++||||+++|+|.+++....... ....+++..+++++.||+.|++|||+.
T Consensus 84 ~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~- 157 (304)
T cd05096 84 LLGVCVD-----EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL- 157 (304)
T ss_pred EEEEEec-----CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC-
Confidence 9999643 457899999999999999997643111 112467888999999999999999999
Q ss_pred CCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC
Q 001908 808 QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA 887 (997)
Q Consensus 808 ~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~ 887 (997)
+|+||||||+||+++.++.+||+|||+++....... ........++..|+|||.+. ++.+
T Consensus 158 --~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~ 217 (304)
T cd05096 158 --NFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY------YRIQGRAVLPIRWMAWECIL------------MGKF 217 (304)
T ss_pred --CccccCcchhheEEcCCccEEECCCccceecccCce------eEecCcCCCCccccCHHHHh------------cCCC
Confidence 999999999999999999999999999976522111 11122334578899996553 4678
Q ss_pred CccchhHHHHHHHHHHHh--CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHh
Q 001908 888 SVTGDVYSLGVMLLEMFT--RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGV 965 (997)
Q Consensus 888 ~~~~DvwSlGvvl~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~ 965 (997)
+.++|||||||++|||++ +..||..... ....+............. . ...+..++..+.+++.
T Consensus 218 ~~~~Dv~slG~~l~el~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~~~~li~ 282 (304)
T cd05096 218 TTASDVWAFGVTLWEILMLCKEQPYGELTD--EQVIENAGEFFRDQGRQV-Y------------LFRPPPCPQGLYELML 282 (304)
T ss_pred CchhhhHHHHHHHHHHHHccCCCCCCcCCH--HHHHHHHHHHhhhccccc-c------------ccCCCCCCHHHHHHHH
Confidence 999999999999999987 5567653321 111111111100000000 0 0011234567899999
Q ss_pred hcCCCCCCCCCCHHHHHHHHH
Q 001908 966 ACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 966 ~cl~~dP~~Rps~~evl~~L~ 986 (997)
+||..||++|||+.||.+.|+
T Consensus 283 ~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 283 QCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHccCCchhCcCHHHHHHHHh
Confidence 999999999999999998876
No 54
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=7.5e-36 Score=327.57 Aligned_cols=252 Identities=23% Similarity=0.307 Sum_probs=195.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.|+..+.||+|+||+||+|....+++.||+|++.... ......+.+|++++++++|++|+++++++ ...+..
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE-----ccCCeE
Confidence 3677899999999999999999899999999986332 22334678899999999999999999884 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+
T Consensus 76 ~lv~e~~~~g~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~ 148 (285)
T cd05631 76 CLVLTIMNGGDLKFHIYNMGN----PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGL 148 (285)
T ss_pred EEEEEecCCCcHHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999988865432 1478899999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+..... ........||..|+|||.+ .+..++.++||||+||++|||++|+.||......
T Consensus 149 ~~~~~~---------~~~~~~~~g~~~y~aPE~~------------~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~ 207 (285)
T cd05631 149 AVQIPE---------GETVRGRVGTVGYMAPEVI------------NNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER 207 (285)
T ss_pred cEEcCC---------CCeecCCCCCCCccCHhhh------------cCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc
Confidence 976421 1112234689999999655 4567899999999999999999999999753221
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
. ....... .... .. ...+......+.+++.+||+.||++||+ ++++++
T Consensus 208 ~-~~~~~~~-~~~~-------~~----------~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 208 V-KREEVDR-RVKE-------DQ----------EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred h-hHHHHHH-Hhhc-------cc----------ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 1 1111110 0000 00 0001122456789999999999999997 777765
No 55
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=6.6e-36 Score=338.34 Aligned_cols=254 Identities=27% Similarity=0.392 Sum_probs=193.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.+|+..++||+|+||+||+|++..+++.||||++... .....+.+.+|+++++.++|+||+++++++ ...+..+
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~ 148 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF-----DHNGEIQ 148 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe-----ccCCeEE
Confidence 4567788999999999999999989999999998643 233456789999999999999999999984 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+.. ..+...+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 149 lv~e~~~~~~L~~~~----------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~ 215 (353)
T PLN00034 149 VLLEFMDGGSLEGTH----------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVS 215 (353)
T ss_pred EEEecCCCCcccccc----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccc
Confidence 999999999986532 245667889999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........||..|+|||.+.. +...+...+.++|||||||++|||++|+.||.....
T Consensus 216 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~-- 278 (353)
T PLN00034 216 RILAQT--------MDPCNSSVGTIAYMSPERINT-------DLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ-- 278 (353)
T ss_pred eecccc--------cccccccccCccccCcccccc-------ccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--
Confidence 765211 111223568999999997753 111233456789999999999999999999973211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
............. ..+. .+..+..++.+++.+||+.||++||++.|+++.
T Consensus 279 ~~~~~~~~~~~~~-----~~~~------------~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 279 GDWASLMCAICMS-----QPPE------------APATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ccHHHHHHHHhcc-----CCCC------------CCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1111111110000 0000 011234568899999999999999999999863
No 56
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=6e-36 Score=331.53 Aligned_cols=273 Identities=22% Similarity=0.338 Sum_probs=196.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.++||+|+||+||+|+.+.+++.||+|+++... ......+.+|++++++++||||+++++++ ...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~ 78 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII-----HTKETL 78 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE-----ecCCeE
Confidence 367999999999999999999999899999999987432 22334678899999999999999999984 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ ++|.+++....+ .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~ 149 (303)
T cd07869 79 TLVFEYVH-TDLCQYMDKHPG-----GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGL 149 (303)
T ss_pred EEEEECCC-cCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCc
Confidence 99999995 688888876432 377888999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 210 (303)
T cd07869 150 ARAKSVP--------SHTYSNEVVTLWYRPPDVLLG-----------STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI 210 (303)
T ss_pred ceeccCC--------CccCCCCcccCCCCChHHHcC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH
Confidence 8753111 111223468999999976642 245788999999999999999999999753221
Q ss_pred CccHHHHHHhh-cchh--hhh-----hcCcccccccccchh--hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA-LPEK--VME-----TVDPSLLLAWSDGRR--RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~-~~~~--~~~-----~~d~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+....... .+.. +.. ..++........... ..........+.+++.+|++.||++|||+.|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 211 QDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred HHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 11111111100 0000 000 000100000000000 0000012345779999999999999999999975
No 57
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=5.5e-36 Score=329.17 Aligned_cols=271 Identities=21% Similarity=0.312 Sum_probs=196.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.++||+|+||+||+|+.+.+++.||+|+++... ......+.+|++++++++||||+++++++ ...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~ 79 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII-----HTERCLT 79 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE-----cCCCeEE
Confidence 46899999999999999999999899999999987432 22345678999999999999999999984 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ |+|.+++..... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 80 lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~ 150 (288)
T cd07871 80 LVFEYLD-SDLKQYLDNCGN-----LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLA 150 (288)
T ss_pred EEEeCCC-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcce
Confidence 9999996 599999876531 367889999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........+++.|+|||.+.. ...++.++||||+||++|||+||++||......
T Consensus 151 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~- 210 (288)
T cd07871 151 RAKSVP--------TKTYSNEVVTLWYRPPDVLLG-----------STEYSTPIDMWGVGCILYEMATGRPMFPGSTVK- 210 (288)
T ss_pred eeccCC--------CccccCceecccccChHHhcC-----------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 754211 111223467899999976532 245788999999999999999999998643211
Q ss_pred ccHHHHHHhh---cchhhhhhcCcc-ccc----ccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA---LPEKVMETVDPS-LLL----AWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~---~~~~~~~~~d~~-~~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... ....+....+.. ... .+..............+..+++.+|+..||++|||++|+++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 211 EELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred HHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111111110 011111111100 000 00000000000112345679999999999999999999975
No 58
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=3.4e-39 Score=349.08 Aligned_cols=361 Identities=25% Similarity=0.387 Sum_probs=211.5
Q ss_pred cEEEEeccCCCCC-CcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhc
Q 001908 75 RVTELDLRHQNIG-GSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVA 153 (997)
Q Consensus 75 ~v~~L~L~~~~l~-g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l 153 (997)
-|...|+++|.++ +.+|..+..++.+++|-|..-++. .+|++++.|.+|++|.+++|++. ++-..++.|+.|+++++
T Consensus 8 FVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv~~ 85 (1255)
T KOG0444|consen 8 FVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSVIV 85 (1255)
T ss_pred eeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHHhh
Confidence 4778899999998 468999999999999999999988 89999999999999999999998 77888888888888888
Q ss_pred cccccc-ccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCC
Q 001908 154 YRNNLV-GEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTG 232 (997)
Q Consensus 154 ~~n~~~-g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g 232 (997)
.+|++. ..||.++| .+..|+.||||+|++. ..|..+.+-+++-.|+||+|+|.
T Consensus 86 R~N~LKnsGiP~diF-~l~dLt~lDLShNqL~------------------------EvP~~LE~AKn~iVLNLS~N~Ie- 139 (1255)
T KOG0444|consen 86 RDNNLKNSGIPTDIF-RLKDLTILDLSHNQLR------------------------EVPTNLEYAKNSIVLNLSYNNIE- 139 (1255)
T ss_pred hccccccCCCCchhc-ccccceeeecchhhhh------------------------hcchhhhhhcCcEEEEcccCccc-
Confidence 877774 34666665 3556666666666665 45666666666666666666665
Q ss_pred CCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcc
Q 001908 233 NLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLD 312 (997)
Q Consensus 233 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 312 (997)
.||..+|.+|+.|-+||||+|++. .+|.....+..|++|+|++|. +...
T Consensus 140 tIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NP------------------------L~hf------ 188 (1255)
T KOG0444|consen 140 TIPNSLFINLTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNP------------------------LNHF------ 188 (1255)
T ss_pred cCCchHHHhhHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCCh------------------------hhHH------
Confidence 666666666666666666666665 444444445555555555444 4321
Q ss_pred hhhhhccCCCCcEEEeecCccC-CCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcc
Q 001908 313 FVTILTNCSKLKVLAFEENRLG-GVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIG 391 (997)
Q Consensus 313 ~~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 391 (997)
-...+..+++|++|.+++.+-+ ..+|.++..+ .+|.+++++.|.+. ..|+.+.++++|+.|+||+|+|+ .+.-..+
T Consensus 189 QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l-~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~ 265 (1255)
T KOG0444|consen 189 QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDL-HNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEG 265 (1255)
T ss_pred HHhcCccchhhhhhhcccccchhhcCCCchhhh-hhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHH
Confidence 1223445566666766665443 2234443333 33444444444444 44444444455555555555544 2222333
Q ss_pred cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCC-CCCCCCCCCCCCcEEecCCCcccCCccccccccccccc
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG-NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSR 470 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~ 470 (997)
...+|++|+||.|+++ .+|.+++.|++|+.|++.+|+++- -+|..++.+.+|+++..++|++. .+|..++.+..| +
T Consensus 266 ~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL-~ 342 (1255)
T KOG0444|consen 266 EWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKL-Q 342 (1255)
T ss_pred HHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHH-H
Confidence 3344445555555554 444455555555555555554431 14444444444444444444443 444444444444 4
Q ss_pred ccccCCCcccCCCccccccccccceeccccc
Q 001908 471 FLDLGNNHLNGSLPLEVGNLKNLVALYISGN 501 (997)
Q Consensus 471 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 501 (997)
.|.|+.|++- .+|+.+.-|+.|+.||+..|
T Consensus 343 kL~L~~NrLi-TLPeaIHlL~~l~vLDlreN 372 (1255)
T KOG0444|consen 343 KLKLDHNRLI-TLPEAIHLLPDLKVLDLREN 372 (1255)
T ss_pred Hhccccccee-echhhhhhcCCcceeeccCC
Confidence 4444444443 34444444444444444444
No 59
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.4e-36 Score=337.53 Aligned_cols=242 Identities=25% Similarity=0.346 Sum_probs=192.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|+.+.+++.||+|+++.. .......+.+|++++++++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~e 75 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EcCCEEEEEEe
Confidence 4689999999999999999999999999743 233446778899999999999999999884 44668999999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~ 146 (323)
T cd05571 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccc
Confidence 999999999998654 478889999999999999999999 99999999999999999999999999987531
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 921 (997)
. .........||+.|+|||++. +..++.++||||+||++|||++|+.||.... ..
T Consensus 147 ~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~-----~~ 201 (323)
T cd05571 147 S--------DGATMKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HE 201 (323)
T ss_pred c--------CCCcccceecCccccChhhhc------------CCCCCccccCcccchhhhhhhcCCCCCCCCC-----HH
Confidence 1 111223457999999996653 5678899999999999999999999986321 11
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
......... +... +.....++.+++.+||+.||++|| ++.++++
T Consensus 202 ~~~~~~~~~------~~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 202 KLFELILME------EIRF------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHcC------CCCC------------CCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 111111100 0000 112245677999999999999999 7888864
No 60
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.9e-35 Score=331.47 Aligned_cols=200 Identities=25% Similarity=0.397 Sum_probs=172.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||.||++++..++..||+|++... .....+.+.+|++++++++||||+++++++. ..+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 78 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY-----SDGEI 78 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEE-----ECCEE
Confidence 36899999999999999999999999999999998754 3334567899999999999999999999854 35589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++.... .+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 150 (331)
T cd06649 79 SICMEHMDGGSLDQVLKEAK------RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGV 150 (331)
T ss_pred EEEeecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCcc
Confidence 99999999999999998654 3788899999999999999999863 699999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+..... .......||+.|+|||.+. +..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~----------~~~~~~~g~~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 151 SGQLID----------SMANSFVGTRSYMSPERLQ------------GTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred cccccc----------cccccCCCCcCcCCHhHhc------------CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 875421 1122346899999996553 56788999999999999999999999963
No 61
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.5e-36 Score=312.26 Aligned_cols=278 Identities=23% Similarity=0.360 Sum_probs=205.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCC-cceEEeeeeccC-cCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRN-LIKIITVCSSID-FKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~-~~~~ 753 (997)
...|...++||+|+||+||+|+.+.+|+.||+|+++... ++......+|+.+++.++|+| |+++++++.... +...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 345777788999999999999999999999999997543 345567899999999999999 999999975432 2233
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||++. +|.+++....... ...+...++.+++|+++|++|||++ +|+||||||+||+|+++|.+||+|
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~--~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaD 163 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKP--QGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLAD 163 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeec
Confidence 478999999955 9999998865221 2356678999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+....+ ........+|..|+|||++-. ...|+...||||+|||++||+++++-|.+.
T Consensus 164 FGlAra~~ip--------~~~yt~evvTlWYRaPEvLlG-----------s~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~ 224 (323)
T KOG0594|consen 164 FGLARAFSIP--------MRTYTPEVVTLWYRAPEVLLG-----------STSYSTSVDIWSLGCIFAEMFTRRPLFPGD 224 (323)
T ss_pred cchHHHhcCC--------cccccccEEEeeccCHHHhcC-----------CCcCCCCcchHhHHHHHHHHHhCCCCCCCC
Confidence 9999865211 122345678999999977653 235899999999999999999999888755
Q ss_pred cCCCccHHHHHHh----hcc--hhhhhhc-Ccccccccccch-hhhhHHHHH---HHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 914 FQGGLTLHEFCKM----ALP--EKVMETV-DPSLLLAWSDGR-RRAKVEECL---VTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 914 ~~~~~~~~~~~~~----~~~--~~~~~~~-d~~~~~~~~~~~-~~~~~~~~~---~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
.+ +.+.... ..| +.+.... -+..+..+.... ........+ ....+++.+|+..+|++|.|++.++
T Consensus 225 se----~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al 300 (323)
T KOG0594|consen 225 SE----IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGAL 300 (323)
T ss_pred cH----HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHh
Confidence 43 2222111 111 1121111 111111111111 111111111 3678999999999999999999998
Q ss_pred HH
Q 001908 983 AK 984 (997)
Q Consensus 983 ~~ 984 (997)
..
T Consensus 301 ~h 302 (323)
T KOG0594|consen 301 TH 302 (323)
T ss_pred cC
Confidence 75
No 62
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.2e-36 Score=332.70 Aligned_cols=246 Identities=24% Similarity=0.311 Sum_probs=195.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|..+.+++.||+|++.... ....+.+.+|++++++++||||++++++ +.+...
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~-----~~~~~~ 75 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWT-----EHDQRF 75 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhh-----hccCCe
Confidence 36889999999999999999999899999999986422 2344678899999999999999999987 445678
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 76 LYMLMEYVPGGELFSYLRNSG------RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 999999999999999998754 478888999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 147 ~~~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~- 202 (291)
T cd05612 147 FAKKLRD-----------RTWTLCGTPEYLAPEVIQ------------SKGHNKAVDWWALGILIYEMLVGYPPFFDDN- 202 (291)
T ss_pred cchhccC-----------CcccccCChhhcCHHHHc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-
Confidence 9976521 112346899999997654 4567899999999999999999999987421
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~~ 984 (997)
..+......... .. .+......+.+++.+||+.||++||+ ++|+++.
T Consensus 203 ----~~~~~~~i~~~~------~~------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 203 ----PFGIYEKILAGK------LE------------FPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred ----HHHHHHHHHhCC------cC------------CCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 111111111000 00 01112345779999999999999995 7777643
No 63
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.1e-36 Score=341.64 Aligned_cols=266 Identities=22% Similarity=0.358 Sum_probs=200.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECC-----CCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
..++|++.+.||+|+||.||+|++.. ++..||+|+++.. .......+.+|+++++.+ +|+||++++++|.
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~--- 112 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACT--- 112 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEec---
Confidence 34589999999999999999998643 3357999999743 333456788999999999 8999999999854
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCC---------------------------------------------------
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQ--------------------------------------------------- 778 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------------------------------------- 778 (997)
..+..++||||+++|+|.++++.....
T Consensus 113 --~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (374)
T cd05106 113 --HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSS 190 (374)
T ss_pred --CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccc
Confidence 345899999999999999998653210
Q ss_pred -------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCC
Q 001908 779 -------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845 (997)
Q Consensus 779 -------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~ 845 (997)
.....+++.++++++.||+.|++|||++ +|+||||||+||++++++++||+|||+++......
T Consensus 191 ~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~- 266 (374)
T cd05106 191 SSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS- 266 (374)
T ss_pred ccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCc-
Confidence 0112478888999999999999999999 99999999999999999999999999997652211
Q ss_pred CCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHH
Q 001908 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFC 924 (997)
Q Consensus 846 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~ 924 (997)
.........++..|+|||++ .+..++.++|||||||++|||++ |+.||....... ......
T Consensus 267 -----~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~ 328 (374)
T cd05106 267 -----NYVVKGNARLPVKWMAPESI------------FDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMV 328 (374)
T ss_pred -----ceeeccCCCCccceeCHHHh------------cCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHH
Confidence 00111223356789999655 35678999999999999999997 999987432211 111110
Q ss_pred HhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 925 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
.. ...+.. +...+.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 329 ~~--------~~~~~~------------~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 329 KR--------GYQMSR------------PDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred Hc--------ccCccC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 00 000000 0112457889999999999999999999999999864
No 64
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2e-38 Score=343.05 Aligned_cols=367 Identities=27% Similarity=0.433 Sum_probs=272.1
Q ss_pred cCccccccccccccccC-CCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccccccccccccccccc
Q 001908 95 GNLSFLRYINLATNNFH-GEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKL 173 (997)
Q Consensus 95 ~~l~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L 173 (997)
+-|+..+-.|+|+|.|+ +..|.....+++++.|.|....+. .+|+.++.|.+|.
T Consensus 4 gVLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLE------------------------ 58 (1255)
T KOG0444|consen 4 GVLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLE------------------------ 58 (1255)
T ss_pred cccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhh------------------------
Confidence 45677788999999999 568999999999999999999997 8888888877665
Q ss_pred ceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCC-CCCCccccccCCCccEEEecC
Q 001908 174 EHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFT-GNLPLDIGVTLPNLQVFAIGD 252 (997)
Q Consensus 174 ~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~-g~lp~~~~~~l~~L~~L~L~~ 252 (997)
+|.+++|++. .+-. .+..++.|+.+++..|++. ..||.++| ++..|++||||+
T Consensus 59 -HLs~~HN~L~-~vhG-----------------------ELs~Lp~LRsv~~R~N~LKnsGiP~diF-~l~dLt~lDLSh 112 (1255)
T KOG0444|consen 59 -HLSMAHNQLI-SVHG-----------------------ELSDLPRLRSVIVRDNNLKNSGIPTDIF-RLKDLTILDLSH 112 (1255)
T ss_pred -hhhhhhhhhH-hhhh-----------------------hhccchhhHHHhhhccccccCCCCchhc-ccccceeeecch
Confidence 5555555554 1111 2223334444444444443 24666666 566666777777
Q ss_pred CcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCc
Q 001908 253 NYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENR 332 (997)
Q Consensus 253 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~ 332 (997)
|++. ..|..+.+.+++-+|+||+|+|..++...|-+|+.|-+||||+|++..+ |+.+..+..|+.|+|++|.
T Consensus 113 NqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~L-------PPQ~RRL~~LqtL~Ls~NP 184 (1255)
T KOG0444|consen 113 NQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEML-------PPQIRRLSMLQTLKLSNNP 184 (1255)
T ss_pred hhhh-hcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhhhc-------CHHHHHHhhhhhhhcCCCh
Confidence 7776 6788888888888888888888888888888899999999999998864 4567788888888888887
Q ss_pred cCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCC-CCCCCCcccccccceeccccccccccch
Q 001908 333 LGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLT-GNIPREIGQLRNLQAIGLSSNFLQGNIP 411 (997)
Q Consensus 333 l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 411 (997)
+... . | ..+..+++|++|.+++.+=+ ..+|.++..|.+|..+|||.|.+. .+|
T Consensus 185 L~hf------Q----L---------------rQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vP 238 (1255)
T KOG0444|consen 185 LNHF------Q----L---------------RQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVP 238 (1255)
T ss_pred hhHH------H----H---------------hcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cch
Confidence 6521 0 1 12234667777777776554 457888888888888888888888 788
Q ss_pred hhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccC-CCccccccc
Q 001908 412 SSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNG-SLPLEVGNL 490 (997)
Q Consensus 412 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~-~~p~~~~~l 490 (997)
+++.++++|+.|+||+|+|+ .+....+...+|++|+||.|+++ .+|+.++.++.| +.|.+.+|+++- -+|..++.|
T Consensus 239 ecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL-~kLy~n~NkL~FeGiPSGIGKL 315 (1255)
T KOG0444|consen 239 ECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKL-TKLYANNNKLTFEGIPSGIGKL 315 (1255)
T ss_pred HHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHH-HHHHhccCcccccCCccchhhh
Confidence 88888888888888888888 56666666778888888888887 777777777777 677777777652 367777777
Q ss_pred cccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccc
Q 001908 491 KNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (997)
.+|+.+..++|++. .+|+.++.|.+|+.|.|++|++. ++|.++.-|+.|+.|||..|.=
T Consensus 316 ~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 316 IQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPN 374 (1255)
T ss_pred hhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcC
Confidence 77777777777776 77777777777777777777776 6777777777777777777743
No 65
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3e-36 Score=328.14 Aligned_cols=252 Identities=22% Similarity=0.334 Sum_probs=208.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce-
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF- 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~- 755 (997)
++|...+++|+|+||.++.++++..++.||+|.+.. ..+..++....|+.++++++|||||.+.+. |..++.
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds-----~~~~~~~ 78 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDS-----FEEDGQL 78 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccc-----hhcCCce
Confidence 468889999999999999999999999999999973 334455688999999999999999999998 444555
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+|||+||+||++.+.+.++.+ ..+++.++.+|+.|++.|+.|||++ +|+|||||+.|||++.++.|||+|||
T Consensus 79 l~Ivm~Y~eGg~l~~~i~~~k~----~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfG 151 (426)
T KOG0589|consen 79 LCIVMEYCEGGDLAQLIKEQKG----VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFG 151 (426)
T ss_pred EEEEEeecCCCCHHHHHHHHhh----ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchh
Confidence 9999999999999999998773 3588999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+...+.. .......||+.||.||.++ +.+|..|+||||+||++|||++-+++|...
T Consensus 152 laK~l~~~~--------~~a~tvvGTp~YmcPEil~------------d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~-- 209 (426)
T KOG0589|consen 152 LAKILNPED--------SLASTVVGTPYYMCPEILS------------DIPYNEKSDIWSLGCCLYEMCTLKPAFKAS-- 209 (426)
T ss_pred hhhhcCCch--------hhhheecCCCcccCHHHhC------------CCCCCccCcchhhcchHHHHHhcccccCcc--
Confidence 999873321 2344578999999996654 678999999999999999999999998743
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
++...+....+.. .. +.+..+..++..++..|+..+|..||++.+++.+
T Consensus 210 ---~m~~Li~ki~~~~----~~-------------Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 210 ---NMSELILKINRGL----YS-------------PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred ---chHHHHHHHhhcc----CC-------------CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 2333222221111 11 1223345678899999999999999999999987
No 66
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-36 Score=333.05 Aligned_cols=244 Identities=24% Similarity=0.348 Sum_probs=200.0
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (997)
.-++|...++||+|.||.|++|..+.+++.||||++++. ...+++..+.|..++... +||.++.++.. |+.
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~-----fQT 440 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSC-----FQT 440 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccc-----ccc
Confidence 446899999999999999999999999999999999853 345667788899988877 59999999987 888
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
++++|+||||+.||++..+.+... +++..+.-+|..|+.||.|||++ +|||||||-+|||+|.+|.+||+
T Consensus 441 ~~~l~fvmey~~Ggdm~~~~~~~~-------F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 441 KEHLFFVMEYVAGGDLMHHIHTDV-------FSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred CCeEEEEEEecCCCcEEEEEeccc-------ccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 999999999999999655555443 89999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+++.. +..+.....++||+.|||||++. +..|+.++|+|||||+||||+.|..||..
T Consensus 511 DFGlcKe~--------m~~g~~TsTfCGTpey~aPEil~------------e~~Yt~aVDWW~lGVLlyeML~Gq~PF~g 570 (694)
T KOG0694|consen 511 DFGLCKEG--------MGQGDRTSTFCGTPEFLAPEVLT------------EQSYTRAVDWWGLGVLLYEMLVGESPFPG 570 (694)
T ss_pred cccccccc--------CCCCCccccccCChhhcChhhhc------------cCcccchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999864 22334556789999999996665 68899999999999999999999999984
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
.. -++.-.....+ ++. .|..+..+...|+.+++..+|++|..+
T Consensus 571 dd-----Eee~FdsI~~d---~~~---------------yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 571 DD-----EEEVFDSIVND---EVR---------------YPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred CC-----HHHHHHHHhcC---CCC---------------CCCcccHHHHHHHHHHhccCcccccCC
Confidence 32 22221111100 111 122334566789999999999999976
No 67
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.1e-35 Score=326.08 Aligned_cols=261 Identities=28% Similarity=0.495 Sum_probs=202.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCC-----cEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENG-----TFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
++|++.+.||+|+||.||+|.....+ ..||+|+++... ......+.+|++.+++++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~-----~ 79 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCT-----K 79 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEc-----C
Confidence 47889999999999999999886444 679999986433 334567899999999999999999999854 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCC----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPE----------VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
.+..+++|||+++|+|.+++.......+ ...+++..++.++.|++.|++|||+. +++||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil 156 (283)
T cd05048 80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCL 156 (283)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEE
Confidence 4578999999999999999987532111 13478889999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+++++.+||+|||+++....... ........+++.|+|||.+ .+..++.++|||||||++||
T Consensus 157 ~~~~~~~~L~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~sDv~slG~il~e 218 (283)
T cd05048 157 VGEGLTVKISDFGLSRDIYSADY------YRVQSKSLLPVRWMPPEAI------------LYGKFTTESDIWSFGVVLWE 218 (283)
T ss_pred EcCCCcEEECCCcceeecccccc------ccccCCCcccccccCHHHh------------ccCcCchhhhHHHHHHHHHH
Confidence 99999999999999976522111 1112233567889999654 35678899999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|++ |..||..... .+.... +.... ....+..++.++.+++.+||+.||++||+++|+
T Consensus 219 l~~~g~~p~~~~~~-----~~~~~~---------i~~~~--------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i 276 (283)
T cd05048 219 IFSYGLQPYYGFSN-----QEVIEM---------IRSRQ--------LLPCPEDCPARVYALMIECWNEIPARRPRFKDI 276 (283)
T ss_pred HHcCCCCCCCCCCH-----HHHHHH---------HHcCC--------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 998 9999874321 111111 10000 011123457789999999999999999999999
Q ss_pred HHHHHH
Q 001908 982 LAKLCA 987 (997)
Q Consensus 982 l~~L~~ 987 (997)
++.|++
T Consensus 277 ~~~l~~ 282 (283)
T cd05048 277 HTRLRS 282 (283)
T ss_pred HHHHhc
Confidence 999975
No 68
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=1.6e-35 Score=325.67 Aligned_cols=271 Identities=22% Similarity=0.308 Sum_probs=197.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||+||+|+++.+++.||+|+++.. .....+.+.+|++++++++|+||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF-----RRRGKL 75 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE-----ecCCEE
Confidence 4688999999999999999999989999999998743 233456778999999999999999999884 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++++.+..+..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~ 146 (287)
T cd07848 76 YLVFEYVEKNMLELLEEMPN------GVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGF 146 (287)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccC
Confidence 99999998877765543322 378889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+....... ........||+.|+|||++. +..++.++||||+||++|||++|++||......
T Consensus 147 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~ 207 (287)
T cd07848 147 ARNLSEGS-------NANYTEYVATRWYRSPELLL------------GAPYGKAVDMWSVGCILGELSDGQPLFPGESEI 207 (287)
T ss_pred cccccccc-------cccccccccccccCCcHHHc------------CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHH
Confidence 98652211 11122356899999996553 566889999999999999999999999753211
Q ss_pred CccHHHHHHh--hcchhhhhh--cCccccc-ccc-----cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKM--ALPEKVMET--VDPSLLL-AWS-----DGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~--~~~~~~~~~--~d~~~~~-~~~-----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ........ ..+...... .++.... .+. .............++.+++.+|++.||++|||++|+++
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 208 D-QLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred H-HHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1 11111110 001100000 0111000 000 00001111224567899999999999999999999875
No 69
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2e-37 Score=301.18 Aligned_cols=253 Identities=22% Similarity=0.336 Sum_probs=201.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++.|++.+.||+|.|+.||++..+.+|+.+|+|++.. ......+++.+|+.+.+.++||||+++... +....
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~t-----i~~~~ 83 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS-----IQEES 83 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhh-----hcccc
Confidence 45678888999999999999999999999999999862 334456788999999999999999999987 56678
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl 831 (997)
..|+|+|+|.|++|..-|-++. .+++..+-++.+||++|++|+|.+ +|||||+||+|+++.+ .--+|+
T Consensus 84 ~~ylvFe~m~G~dl~~eIV~R~------~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL 154 (355)
T KOG0033|consen 84 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKL 154 (355)
T ss_pred eeEEEEecccchHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceee
Confidence 9999999999999987776652 367888899999999999999999 9999999999999953 346899
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|..+. .+....++.|||+|||||++. ..+|+..+|||+.|||+|-++.|++||.
T Consensus 155 ~~FGvAi~l~---------~g~~~~G~~GtP~fmaPEvvr------------kdpy~kpvDiW~cGViLfiLL~G~~PF~ 213 (355)
T KOG0033|consen 155 ADFGLAIEVN---------DGEAWHGFAGTPGYLSPEVLK------------KDPYSKPVDIWACGVILYILLVGYPPFW 213 (355)
T ss_pred cccceEEEeC---------CccccccccCCCcccCHHHhh------------cCCCCCcchhhhhhHHHHHHHhCCCCCC
Confidence 9999998762 344556789999999997776 4689999999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+. +.+...+...... .+...|. .....++-.+++.+|+..||++|+|+.|+++
T Consensus 214 ~~-----~~~rlye~I~~g~-yd~~~~~-------------w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 214 DE-----DQHRLYEQIKAGA-YDYPSPE-------------WDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred Cc-----cHHHHHHHHhccc-cCCCCcc-------------cCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 42 2222222211110 0000011 1112334568999999999999999999864
No 70
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-39 Score=363.26 Aligned_cols=462 Identities=27% Similarity=0.336 Sum_probs=287.4
Q ss_pred cEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcc
Q 001908 75 RVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAY 154 (997)
Q Consensus 75 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~ 154 (997)
++..|||++|.+ +.+|..+..+.+|+.|+++.|.+. ..|.+++++.+|++|+|.+|.+. .+|.++..+.+|++|+++
T Consensus 46 ~L~~l~lsnn~~-~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQI-SSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeecccccc-ccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 367777777666 467777777777777777777776 66777777777777777777776 777777777777777777
Q ss_pred cccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCC
Q 001908 155 RNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNL 234 (997)
Q Consensus 155 ~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~l 234 (997)
.|++. .+|..+. .++.++.++.++|... ..+|......+++..|.+.+.++..+.+++. .|+|.+|++. .+
T Consensus 123 ~N~f~-~~Pl~i~-~lt~~~~~~~s~N~~~----~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~ 193 (1081)
T KOG0618|consen 123 FNHFG-PIPLVIE-VLTAEEELAASNNEKI----QRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VL 193 (1081)
T ss_pred hhccC-CCchhHH-hhhHHHHHhhhcchhh----hhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hh
Confidence 77765 6666664 3566677777777322 2233344556777777777777777777766 6777777765 22
Q ss_pred CccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchh
Q 001908 235 PLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFV 314 (997)
Q Consensus 235 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 314 (997)
. ...+.+|+.+....|+++... -...+|+.|+.++|.++...+. ..-.+|+++++++|+++. .|
T Consensus 194 d---ls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~~-------lp 257 (1081)
T KOG0618|consen 194 D---LSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDVH--PVPLNLQYLDISHNNLSN-------LP 257 (1081)
T ss_pred h---hhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeeccc--cccccceeeecchhhhhc-------ch
Confidence 2 124566777777777765322 1234677777777777633221 223567777777777765 34
Q ss_pred hhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccccc
Q 001908 315 TILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLR 394 (997)
Q Consensus 315 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 394 (997)
+++..+.+|+.++..+|++. .+|..+... ++|+.|.+.+|.++ -+|.....++.|++|+|..|+|....+..|.-+.
T Consensus 258 ~wi~~~~nle~l~~n~N~l~-~lp~ri~~~-~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~ 334 (1081)
T KOG0618|consen 258 EWIGACANLEALNANHNRLV-ALPLRISRI-TSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLN 334 (1081)
T ss_pred HHHHhcccceEecccchhHH-hhHHHHhhh-hhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhh
Confidence 56677777777777777774 556655555 56677777777776 5566666677777777777777643333333333
Q ss_pred c-cceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccc-ccccccccccc
Q 001908 395 N-LQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQ-ILTITTLSRFL 472 (997)
Q Consensus 395 ~-L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~ll~~L 472 (997)
. |..|+.+.|++....-..=..+..|+.|++.+|+++...-..+.+.+.|+.|+|++|++. .+|+. +.++..+ +.|
T Consensus 335 ~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~-~fpas~~~kle~L-eeL 412 (1081)
T KOG0618|consen 335 ASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLN-SFPASKLRKLEEL-EEL 412 (1081)
T ss_pred HHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccc-cCCHHHHhchHHh-HHH
Confidence 2 566666666666322111223455666777777776665566666666777777777665 45543 3344444 666
Q ss_pred ccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccC-ChhccccCcCCeeeCccccc
Q 001908 473 DLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI-PLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 473 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l 551 (997)
+||+|+++ .+|..+.++..|++|...+|++. ..| .+..++.|+.+|+|.|+|+... |..... ++|++|||++|.=
T Consensus 413 ~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~-p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 413 NLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPS-PNLKYLDLSGNTR 488 (1081)
T ss_pred hcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCC-cccceeeccCCcc
Confidence 66666666 56666666666666666666665 555 6666666666666666665332 322222 5666666666652
Q ss_pred cccCchhccCCCCCCEEeCCCC
Q 001908 552 SGQIPEFLENLSFLEYLNLSYN 573 (997)
Q Consensus 552 ~~~~p~~~~~l~~L~~L~ls~N 573 (997)
.-..-+.|..++++...+++-|
T Consensus 489 l~~d~~~l~~l~~l~~~~i~~~ 510 (1081)
T KOG0618|consen 489 LVFDHKTLKVLKSLSQMDITLN 510 (1081)
T ss_pred cccchhhhHHhhhhhheecccC
Confidence 2233445555555555555555
No 71
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.1e-35 Score=334.95 Aligned_cols=278 Identities=22% Similarity=0.293 Sum_probs=199.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.++||+|+||.||+|+...+++.||||+++.. .......+.+|++++++++||||+++++++...........+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 478889999999999999999989999999998632 223345688999999999999999999987654433445689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+ +++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 81 lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 81 VVFELM-ESDLHQVIKAND------DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred EEEecC-CCCHHHHHHhcc------cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccc
Confidence 999999 569999987654 478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+....... .........||+.|+|||++... ...++.++|||||||++|||+||++||......
T Consensus 151 ~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~~----------~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~- 214 (338)
T cd07859 151 RVAFNDTP-----TAIFWTDYVATRWYRAPELCGSF----------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVV- 214 (338)
T ss_pred cccccccC-----ccccccCCCCCCCcCCHHHHhcc----------ccccCchhHHHHHHHHHHHHHcCCCCCCCCChH-
Confidence 76422111 11112345789999999876421 246788999999999999999999998643210
Q ss_pred ccHHHHHHhhc----chhhhhhcCcc---cccccccchhhh---hHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMAL----PEKVMETVDPS---LLLAWSDGRRRA---KVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~----~~~~~~~~d~~---~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.......... +.......... ...........+ ........+.+++.+||..||++|||+.|+++.
T Consensus 215 -~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 215 -HQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred -HHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000000 00000000000 000000000000 001234567899999999999999999999853
No 72
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-36 Score=332.03 Aligned_cols=250 Identities=22% Similarity=0.329 Sum_probs=203.9
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeecc
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQ 764 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~ 764 (997)
-+||+|.||+||.|++..+...+|||.+........+-+..||...++++|+|||+++|.| ..+++.-|.||.++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~-----senGf~kIFMEqVP 655 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV-----SENGFFKIFMEQVP 655 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc-----CCCCeEEEEeecCC
Confidence 4799999999999999999999999999877777778899999999999999999999985 34568899999999
Q ss_pred CCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-CCCcEEEcccccchhcccC
Q 001908 765 NGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 765 ~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFg~a~~~~~~ 843 (997)
||+|.+.++..-+. ..-++.++-.+.+||++||.|||++ .|||||||-.||||+ -.|.+||+|||-++.+..
T Consensus 656 GGSLSsLLrskWGP---lKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg- 728 (1226)
T KOG4279|consen 656 GGSLSSLLRSKWGP---LKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG- 728 (1226)
T ss_pred CCcHHHHHHhccCC---CccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhcc-
Confidence 99999999976532 1226778888999999999999999 999999999999997 568999999999988732
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
.......+.||..|||||+++.- ...|+.++|||||||.+.||.||++||.........+.+.
T Consensus 729 -------inP~TETFTGTLQYMAPEvIDqG----------~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV 791 (1226)
T KOG4279|consen 729 -------INPCTETFTGTLQYMAPEVIDQG----------PRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV 791 (1226)
T ss_pred -------CCccccccccchhhhChHhhccC----------CcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh
Confidence 22334457899999999998742 3568999999999999999999999998542221111110
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+.++ ...+.+++...+-..+|.+|+.+||.+||++++++.
T Consensus 792 ------------------GmyK--vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 792 ------------------GMYK--VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred ------------------ccee--cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 0011 112345566677788999999999999999999875
No 73
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-35 Score=325.57 Aligned_cols=276 Identities=27% Similarity=0.381 Sum_probs=202.3
Q ss_pred hcCccCCcccccCcceEEEEEE----CCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||.||+|.. ..+++.||+|++........+.+.+|++++++++||||+++++++.. .+..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~ 80 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGRR 80 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc---CCCC
Confidence 4788899999999999999984 34688999999986666666788999999999999999999998643 2345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~df 152 (284)
T cd05081 81 NLRLVMEYLPYGSLRDYLQKHRE-----RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDF 152 (284)
T ss_pred ceEEEEEecCCCCHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCC
Confidence 68999999999999999976431 378899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++....... .........++..|+|||.+. +..++.++|||||||++|||++|..|+....
T Consensus 153 g~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~ 215 (284)
T cd05081 153 GLTKVLPQDKE-----YYKVREPGESPIFWYAPESLT------------ESKFSVASDVWSFGVVLYELFTYSDKSCSPP 215 (284)
T ss_pred cccccccCCCc-----ceeecCCCCCceEeeCHHHhc------------cCCcChHHHHHHHHHHHHHHhhcCCcCCCcc
Confidence 99986532111 000111123445699996553 4668899999999999999999877754221
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
. .+................+..........+....++.++.+++.+||..+|++|||++|+++.|+++
T Consensus 216 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 216 A------EFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred h------hhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 1 1110000000000000000000000111111223456788999999999999999999999999875
No 74
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=3.2e-36 Score=337.27 Aligned_cols=245 Identities=21% Similarity=0.294 Sum_probs=195.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|+++.+++.||+|+++.. .....+.+.+|++++++++||||+++++++ ...+.
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 92 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF-----QDENR 92 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE-----EcCCE
Confidence 5788999999999999999999999999999998643 223456788999999999999999999985 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 93 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 93 VYFLLEFVVGGELFTHLRKAG------RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred EEEEEcCCCCChHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999998754 367788889999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 164 ~~~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~elltg~~pf~~~~- 219 (329)
T PTZ00263 164 FAKKVPD-----------RTFTLCGTPEYLAPEVIQ------------SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDT- 219 (329)
T ss_pred CceEcCC-----------CcceecCChhhcCHHHHc------------CCCCCCcceeechHHHHHHHHcCCCCCCCCC-
Confidence 9976421 112357899999997654 4667899999999999999999999986321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
..+......... ... +......+.+++.+||..||++||+ ++|+++
T Consensus 220 ----~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 220 ----PFRIYEKILAGR------LKF------------PNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred ----HHHHHHHHhcCC------cCC------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 111111111100 000 0012345679999999999999997 577653
No 75
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.1e-36 Score=332.09 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=201.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc----EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|+..+.||+|+||.||+|++..+++ .||+|+++.. .....+.+.+|+.+++.++||||++++++|..
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~------ 80 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 80 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC------
Confidence 579999999999999999999865555 4899998643 33445778899999999999999999999753
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++|+||+++|+|.+++.+... .+++..+++++.||+.||+|||++ +|+||||||+||++++++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~D 152 (316)
T cd05108 81 STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITD 152 (316)
T ss_pred CCceeeeecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcc
Confidence 246799999999999999987542 377889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+++....... ........++..|+|||.+ .+..++.++|||||||++|||++ |+.||..
T Consensus 153 fG~a~~~~~~~~------~~~~~~~~~~~~y~apE~~------------~~~~~~~~~Di~slGv~l~el~t~g~~p~~~ 214 (316)
T cd05108 153 FGLAKLLGADEK------EYHAEGGKVPIKWMALESI------------LHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 214 (316)
T ss_pred ccccccccCCCc------ceeccCCccceeecChHHh------------ccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 999986532111 0111122346789999654 35678899999999999999998 9999863
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.. ..+...... .. ...+.+..+..++.+++.+||..+|++||++.+++..+.++..+.
T Consensus 215 ~~-----~~~~~~~~~-~~----------------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 215 IP-----ASEISSILE-KG----------------ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CC-----HHHHHHHHh-CC----------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 21 111111100 00 000011123456789999999999999999999999999877643
No 76
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2e-35 Score=325.39 Aligned_cols=275 Identities=23% Similarity=0.332 Sum_probs=196.4
Q ss_pred hcCccCCcccccCcceEEEEEEC-CCCcEEEEEEecccc--hhhHHHHHHHHHHHhhc---CCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-ENGTFVAVKILNLMQ--KGALKSFVAECEVLRNT---RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~ 752 (997)
++|++.+.||+|+||+||+|++. .+++.||+|+++... ......+.+|+++++.+ +||||++++++|.......
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999985 356889999986332 22334566788777765 6999999999986543445
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++||||++ ++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~ 152 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPE----PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 152 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEc
Confidence 567999999995 699999976542 2378899999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.++..... .......||+.|+|||.+. +..++.++|||||||++|||++|++||..
T Consensus 153 Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~~f~~ 211 (290)
T cd07862 153 DFGLARIYSFQ---------MALTSVVVTLWYRAPEVLL------------QSSYATPVDLWSVGCIFAEMFRRKPLFRG 211 (290)
T ss_pred cccceEeccCC---------cccccccccccccChHHHh------------CCCCCCccchHHHHHHHHHHHcCCCCcCC
Confidence 99999754211 1223456899999997653 45688899999999999999999999974
Q ss_pred CcCCCccHHHHHHhh---cchhhhhhc--CcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMA---LPEKVMETV--DPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~---~~~~~~~~~--d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+....... .+..+.... .......................+.+++.+|++.||++|||+.|+++
T Consensus 212 ~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 212 SSDV-DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred CCHH-HHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 3211 1111111110 001110000 00000000000000011123456789999999999999999999985
No 77
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-36 Score=292.61 Aligned_cols=251 Identities=23% Similarity=0.356 Sum_probs=205.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+.++|.+++.||+|.||.||.|+.+.++-.||+|++.+. ..+....+.+|+++-+.++||||+++|+| |.+.
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~-----fhd~ 94 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGY-----FHDS 94 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhh-----eecc
Confidence 346899999999999999999999999999999999633 23345688999999999999999999999 5567
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...|+++||.++|+++..++.+... .++......+..|+|.|+.|+|.+ .|+||||||+|+|++..+..|++|
T Consensus 95 ~riyLilEya~~gel~k~L~~~~~~----~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAd 167 (281)
T KOG0580|consen 95 KRIYLILEYAPRGELYKDLQEGRMK----RFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIAD 167 (281)
T ss_pred ceeEEEEEecCCchHHHHHHhcccc----cccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccC
Confidence 7999999999999999999965532 477778889999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||-+... ........+||..|.||| ...+..++..+|+|++|++.||++.|.+||+..
T Consensus 168 fGwsV~~----------p~~kR~tlcgt~dyl~pE------------mv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~ 225 (281)
T KOG0580|consen 168 FGWSVHA----------PSNKRKTLCGTLDYLPPE------------MVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQ 225 (281)
T ss_pred CCceeec----------CCCCceeeecccccCCHh------------hcCCCCccchhhHHHHHHHHHHHHhcCCchhhh
Confidence 9988542 234456689999999995 445788999999999999999999999999865
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
. .+..+.+. ...+..+|.. ......++|..|+.++|.+|.+..|+++.
T Consensus 226 ~-~~etYkrI-------~k~~~~~p~~---------------is~~a~dlI~~ll~~~p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 226 S-HSETYKRI-------RKVDLKFPST---------------ISGGAADLISRLLVKNPIERLALTEVMDH 273 (281)
T ss_pred h-hHHHHHHH-------HHccccCCcc---------------cChhHHHHHHHHhccCccccccHHHHhhh
Confidence 3 22122221 1112222221 23356789999999999999999998763
No 78
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1e-35 Score=334.13 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=199.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|++..+++.||+|+++... ......+.+|++++++++||||+++++++ ...+.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~-----~~~~~ 75 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF-----QDDEY 75 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE-----EcCCE
Confidence 36889999999999999999999899999999997432 23456788999999999999999999985 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 76 LYLAMEYVPGGDFRTLLNNLG------VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 999999999999999997654 478889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.... ......||+.|+|||.+ .+..++.++|||||||++|||++|+.||....
T Consensus 147 ~a~~~~~-----------~~~~~~gt~~y~aPE~~------------~~~~~~~~~DvwslG~il~ell~g~~pf~~~~- 202 (333)
T cd05600 147 LSKGIVT-----------YANSVVGSPDYMAPEVL------------RGKGYDFTVDYWSLGCMLYEFLCGFPPFSGST- 202 (333)
T ss_pred CCccccc-----------ccCCcccCccccChhHh------------cCCCCCCccceecchHHHhhhhhCCCCCCCCC-
Confidence 9975421 22345789999999655 35678899999999999999999999987431
Q ss_pred CCccHHHHHHhhcchhhhhhc-CcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETV-DPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..+....... ..... .+... + .......++.+++.+|+..+|++||+++|+++.
T Consensus 203 ----~~~~~~~i~~--~~~~~~~~~~~----~-----~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 203 ----PNETWENLKY--WKETLQRPVYD----D-----PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred ----HHHHHHHHHh--ccccccCCCCC----c-----cccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1111111000 00000 00000 0 001234567899999999999999999999864
No 79
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2.8e-35 Score=322.10 Aligned_cols=262 Identities=22% Similarity=0.369 Sum_probs=201.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc----EEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||+||+|++..+++ +||+|++.... .....++..|+..+++++||||+++++++..
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~------ 80 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG------ 80 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC------
Confidence 578889999999999999999976666 47778775332 2334677888889999999999999998632
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++++||+++|+|.+++..... .+++..+..++.||+.|++|||++ +++||||||+||+++.++.+|++|
T Consensus 81 ~~~~~i~e~~~~gsL~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~D 152 (279)
T cd05111 81 ASLQLVTQLSPLGSLLDHVRQHRD-----SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIAD 152 (279)
T ss_pred CccEEEEEeCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcC
Confidence 347899999999999999986542 378999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||.++...... .........++..|+|||.+ .++.++.++|||||||++||+++ |+.||..
T Consensus 153 fg~~~~~~~~~------~~~~~~~~~~~~~y~~pE~~------------~~~~~~~~~Dv~slG~il~el~t~g~~p~~~ 214 (279)
T cd05111 153 FGVADLLYPDD------KKYFYSEHKTPIKWMALESI------------LFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG 214 (279)
T ss_pred CccceeccCCC------cccccCCCCCcccccCHHHh------------ccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence 99997653211 11112234577789999654 35678999999999999999998 9999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
... ....+..... . ... .+..++..+.+++.+||..+|++|||+.|+++.|.++..+.
T Consensus 215 ~~~--~~~~~~~~~~---~--~~~---------------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 215 MRP--HEVPDLLEKG---E--RLA---------------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred CCH--HHHHHHHHCC---C--cCC---------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 311 1111111100 0 000 01123456788999999999999999999999999987765
Q ss_pred hc
Q 001908 993 VG 994 (997)
Q Consensus 993 ~~ 994 (997)
.+
T Consensus 273 ~~ 274 (279)
T cd05111 273 PR 274 (279)
T ss_pred cc
Confidence 44
No 80
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.5e-35 Score=308.61 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=205.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.+.|+..+.||+|.-|+||+++.+.++..+|+|++.+.. .....++..|.+||+.++||.++.+|+. |+.+.
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~-----fet~~ 150 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYAS-----FETDK 150 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhe-----eeccc
Confidence 356778899999999999999999899999999997432 3345677889999999999999999998 77788
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
+.|+|||||+||+|....+++.+. .++...++.+|.+|+.||+|||-. |||+||+||+||||.++|++-++||
T Consensus 151 ~~cl~meyCpGGdL~~LrqkQp~~----~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 151 YSCLVMEYCPGGDLHSLRQKQPGK----RFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred eeEEEEecCCCccHHHHHhhCCCC----ccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 999999999999999999988743 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCC-C------------------------------C-----------------ccccccccccccccccccC
Q 001908 835 GLARFLFARPF-D------------------------------T-----------------SMETQSSSIGIKGTVGYVP 866 (997)
Q Consensus 835 g~a~~~~~~~~-~------------------------------~-----------------~~~~~~~~~~~~gt~~y~a 866 (997)
.++......+. . . +.........++||-.|.|
T Consensus 224 DLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlA 303 (459)
T KOG0610|consen 224 DLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLA 303 (459)
T ss_pred cccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccccc
Confidence 99876522100 0 0 0112233455779999999
Q ss_pred CcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCccccccccc
Q 001908 867 PGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSD 946 (997)
Q Consensus 867 PE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 946 (997)
||++ .|...+.++|+|+|||++|||+.|..||..... ..++...+.+. ..-.-.
T Consensus 304 PEvI------------~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~-~~Tl~NIv~~~----l~Fp~~--------- 357 (459)
T KOG0610|consen 304 PEVI------------RGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNN-KETLRNIVGQP----LKFPEE--------- 357 (459)
T ss_pred ceee------------ecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCc-hhhHHHHhcCC----CcCCCC---------
Confidence 9555 577889999999999999999999999985422 22333322211 000001
Q ss_pred chhhhhHHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 001908 947 GRRRAKVEECLVTVIRIGVACSMESPIERME----MRDVLA 983 (997)
Q Consensus 947 ~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~ 983 (997)
.+...+..+||.+.+.+||++|.. +.||.+
T Consensus 358 -------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 358 -------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred -------CcchhHHHHHHHHHhccChhhhhccccchHHhhc
Confidence 122346679999999999999998 666643
No 81
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.2e-35 Score=330.39 Aligned_cols=239 Identities=23% Similarity=0.327 Sum_probs=189.2
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||.||+|+...+++.||+|+++.. .......+.+|++++++++||||+++++++ ...+..++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF-----QSPEKLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE-----ecCCeEEEEEcCC
Confidence 69999999999999989999999998632 234456788999999999999999999885 4456899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 76 ~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 146 (312)
T cd05585 76 NGGELFHHLQREG------RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKD 146 (312)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccC
Confidence 9999999998654 478889999999999999999999 9999999999999999999999999998753211
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
........||+.|+|||++. +..++.++||||+||++|||++|+.||... ...+.
T Consensus 147 --------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslGvil~el~tg~~pf~~~-----~~~~~ 201 (312)
T cd05585 147 --------DDKTNTFCGTPEYLAPELLL------------GHGYTKAVDWWTLGVLLYEMLTGLPPFYDE-----NVNEM 201 (312)
T ss_pred --------CCccccccCCcccCCHHHHc------------CCCCCCccceechhHHHHHHHhCCCCcCCC-----CHHHH
Confidence 11223457999999996553 567889999999999999999999998732 12222
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC---HHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME---MRDVL 982 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps---~~evl 982 (997)
........ .. .+.....++.+++.+||..||++||+ +.|++
T Consensus 202 ~~~~~~~~------~~------------~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 202 YRKILQEP------LR------------FPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHHcCC------CC------------CCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 22111100 00 01123456779999999999999985 45554
No 82
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=2.1e-35 Score=320.14 Aligned_cols=256 Identities=25% Similarity=0.463 Sum_probs=201.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.++||+|+||.||+|.++.+++.||+|++... ....+.+.+|++++++++|+||+++++++. ..+..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 79 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFYI 79 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEc-----CCCCcEE
Confidence 4688899999999999999999988999999998743 333567899999999999999999999854 3457899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
+|||+++++|.+++..... ..+++..++.++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 80 v~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~ 152 (263)
T cd05052 80 ITEFMTYGNLLDYLRECNR----QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 152 (263)
T ss_pred EEEeCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccc
Confidence 9999999999999976432 2478899999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
....... .......++..|+|||.+ .+..++.++|||||||++|||++ |..||...
T Consensus 153 ~~~~~~~-------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~---- 209 (263)
T cd05052 153 LMTGDTY-------TAHAGAKFPIKWTAPESL------------AYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI---- 209 (263)
T ss_pred cccccee-------eccCCCCCccccCCHHHh------------ccCCCCchhHHHHHHHHHHHHHcCCCCCCCCC----
Confidence 6522111 111122346689999654 35678889999999999999998 89998632
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
...+...... ....+ ..+..++.++.+++.+||..+|++||++.|+.+.|+.+
T Consensus 210 -~~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 210 -DLSQVYELLE-----KGYRM------------ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred -CHHHHHHHHH-----CCCCC------------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 1222111110 00000 01122356788999999999999999999999999875
No 83
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.1e-35 Score=331.85 Aligned_cols=242 Identities=25% Similarity=0.350 Sum_probs=191.4
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+++.+.+++.||+|+++.. .......+.+|++++++++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~-----~~~~~~~lv~E 75 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHDRLCFVME 75 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCEEEEEEe
Confidence 4689999999999999989999999999743 233456778899999999999999999884 44568999999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 146 (323)
T cd05595 76 YANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGI 146 (323)
T ss_pred CCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhcccc
Confidence 999999999987654 478899999999999999999999 99999999999999999999999999987532
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 921 (997)
.. ........||+.|+|||.+ .+..++.++|||||||++|||++|+.||.... ..
T Consensus 147 ~~--------~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~-----~~ 201 (323)
T cd05595 147 SD--------GATMKTFCGTPEYLAPEVL------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----HE 201 (323)
T ss_pred CC--------CCccccccCCcCcCCcccc------------cCCCCCchhchhhhHHHHHHHHhCCCCCCCCC-----HH
Confidence 11 1112235689999999654 45678899999999999999999999986331 11
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
+......... ... +.....++.+++.+||+.||++|| ++.++++
T Consensus 202 ~~~~~~~~~~------~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 202 RLFELILMEE------IRF------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHhcCC------CCC------------CCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 1111111000 000 112345677999999999999998 7888764
No 84
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.6e-35 Score=320.06 Aligned_cols=265 Identities=23% Similarity=0.394 Sum_probs=198.8
Q ss_pred CccCCcccccCcceEEEEEECCCCc--EEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCce
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGT--FVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGADF 755 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~--~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 755 (997)
|.+.++||+|+||.||+|++..++. .||+|.++.. .....+.+.+|+++++.++|+||++++++|..... .....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3567899999999999999976665 6899988643 34456788999999999999999999998754321 12335
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+++|||+++|+|.+++...........+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 789999999999999986433222223478999999999999999999998 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
+++....... ........+++.|+|||.. .+..++.++|||||||++|||++ |+.||....
T Consensus 158 ~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~------------~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 219 (272)
T cd05075 158 LSKKIYNGDY------YRQGRIAKMPVKWIAIESL------------ADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVE 219 (272)
T ss_pred cccccCcccc------eecCCcccCCcccCCHHHc------------cCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 9986532111 0111223456789999544 45678899999999999999999 788886421
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
. .+.......... . ..+..++..+.+++.+||..+|++|||+.++++.|+++
T Consensus 220 ~-----~~~~~~~~~~~~-----~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 220 N-----SEIYDYLRQGNR-----L------------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred H-----HHHHHHHHcCCC-----C------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 1 111111100000 0 00112345678999999999999999999999999864
No 85
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.5e-35 Score=328.35 Aligned_cols=200 Identities=26% Similarity=0.416 Sum_probs=171.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.++||+|+||.||+|++..++..+|+|++... .......+.+|++++++++|+||+++++++.. .+..
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~ 78 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEI 78 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEE-----CCEE
Confidence 46899999999999999999999989999999998743 33445678999999999999999999999643 5589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++.... .+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~ 150 (333)
T cd06650 79 SICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGV 150 (333)
T ss_pred EEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCc
Confidence 99999999999999998654 3678889999999999999999752 799999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+..... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||..
T Consensus 151 ~~~~~~----------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 151 SGQLID----------SMANSFVGTRSYMSPERLQ------------GTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred chhhhh----------hccccCCCCccccCHHHhc------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 875421 1112346899999996553 56688899999999999999999999874
No 86
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=4.4e-35 Score=319.46 Aligned_cols=265 Identities=24% Similarity=0.398 Sum_probs=201.2
Q ss_pred CccCCcccccCcceEEEEEECCC---CcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCc
Q 001908 681 FSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGAD 754 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 754 (997)
|++.+.||+|+||.||+|+...+ +..||+|+++.. .......+.+|++.++.++|+||+++++++..... ....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 56789999999999999998643 378999998743 23345688999999999999999999998754332 2334
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++++||+++|+|.+++...........+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 5899999999999999987654322233588999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.++........ .......++..|+|||.+ .+..++.++|||||||++|||++ |..||...
T Consensus 158 g~~~~~~~~~~~------~~~~~~~~~~~~~~pe~~------------~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~ 219 (273)
T cd05035 158 GLSKKIYSGDYY------RQGRIAKMPVKWIAIESL------------ADRVYTSKSDVWAFGVTMWEIATRGQTPYPGV 219 (273)
T ss_pred cceeeccccccc------cccccccCCccccCHhhc------------ccCCCCcccchHHHHHHHHHHHhCCCCCCCCC
Confidence 999866332111 111122346789999654 35668889999999999999999 88888642
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.. .+...... ....+ ..+..++.++.+++.+||+.||++||++.|+++.|+++
T Consensus 220 ~~-----~~~~~~~~-----~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 220 EN-----HEIYDYLR-----HGNRL------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred CH-----HHHHHHHH-----cCCCC------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 11111100 00000 11123456788999999999999999999999999875
No 87
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=2.6e-35 Score=318.08 Aligned_cols=251 Identities=29% Similarity=0.444 Sum_probs=195.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||+|+++ .+..+|+|.+.... ...+.+.+|++++++++||||+++++++. ..+..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~i 76 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCT-----QQKPLYI 76 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEc-----cCCCEEE
Confidence 56888999999999999999986 56689999886332 23467889999999999999999999854 3457899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.++++.... .+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~ 148 (256)
T cd05114 77 VTEFMENGCLLNYLRQRQG-----KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCcc
Confidence 9999999999999986432 378899999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
....... .......++..|+|||.+ .+..++.++||||||+++|||++ |+.||....
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--- 206 (256)
T cd05114 149 YVLDDEY-------TSSSGAKFPVKWSPPEVF------------NFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--- 206 (256)
T ss_pred ccCCCce-------eccCCCCCchhhCChhhc------------ccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC---
Confidence 6522111 111223456689999654 35668889999999999999999 899986331
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
..+......... ....+ ...+.++.+++.+||..+|++||++.++++.|
T Consensus 207 --~~~~~~~i~~~~--~~~~~---------------~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 207 --NYEVVEMISRGF--RLYRP---------------KLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --HHHHHHHHHCCC--CCCCC---------------CCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 111111111000 00011 11235688999999999999999999999886
No 88
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=3.8e-36 Score=324.89 Aligned_cols=251 Identities=32% Similarity=0.523 Sum_probs=189.8
Q ss_pred cCCcccccCcceEEEEEEC----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 683 SSNMIGQGSFGSVYKGILG----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
..+.||.|.||.||+|.+. ..+..||||+++.. .....+.+.+|++.+++++||||++++|+|.. .+..+
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-----~~~~~ 77 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-----NEPLF 77 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES-----SSSEE
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccc-----ccccc
Confidence 4578999999999999997 44678999999643 33447899999999999999999999999863 33589
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++.... ...+++.+++.|+.||++||.|||++ +++|+||+++||++++++.+||+|||++
T Consensus 78 lv~e~~~~g~L~~~L~~~~----~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~ 150 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKN----KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLS 150 (259)
T ss_dssp EEEE--TTEBHHHHHHHTC----TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTG
T ss_pred ccccccccccccccccccc----cccccccccccccccccccccccccc---cccccccccccccccccccccccccccc
Confidence 9999999999999999872 12489999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
....... .............|+|||.+.. ..++.++||||||+++||+++ |+.||...
T Consensus 151 ~~~~~~~------~~~~~~~~~~~~~~~aPE~~~~------------~~~~~ksDVysfG~~l~ei~~~~~~p~~~~--- 209 (259)
T PF07714_consen 151 RPISEKS------KYKNDSSQQLPLRYLAPEVLKD------------GEYTKKSDVYSFGMLLYEILTLGKFPFSDY--- 209 (259)
T ss_dssp EETTTSS------SEEESTTSESGGGGS-HHHHHH------------SEESHHHHHHHHHHHHHHHHTTSSGTTTTS---
T ss_pred ccccccc------cccccccccccccccccccccc------------cccccccccccccccccccccccccccccc---
Confidence 7652111 1122233456778999977653 458999999999999999999 77887643
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
...+........ .+.+.+..++..+.+++..||+.+|++||++++++++|
T Consensus 210 --~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 210 --DNEEIIEKLKQG-----------------QRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp --CHHHHHHHHHTT-----------------EETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred --cccccccccccc-----------------ccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112211111000 00111223456788999999999999999999999876
No 89
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=1.2e-35 Score=321.84 Aligned_cols=256 Identities=28% Similarity=0.455 Sum_probs=204.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
...+|++.++||+|+||.||+|.+.. +..+|+|++..........+.+|+++++.++|+||+++++++. ..+..
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 77 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCS-----VGEPV 77 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEe-----cCCCe
Confidence 45679999999999999999999985 8899999998665555678899999999999999999999854 45578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++....+ ..+++.++++++.|++.|+.|||+. +|+||||||+||++++++.+||+|||.
T Consensus 78 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~ 150 (261)
T cd05148 78 YIITELMEKGSLLAFLRSPEG----QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGL 150 (261)
T ss_pred EEEEeecccCCHHHHHhcCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccc
Confidence 999999999999999987542 2478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
+........ ......++..|+|||.+ .+..++.++||||||+++|+|++ |+.||....
T Consensus 151 ~~~~~~~~~--------~~~~~~~~~~~~~PE~~------------~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~- 209 (261)
T cd05148 151 ARLIKEDVY--------LSSDKKIPYKWTAPEAA------------SHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN- 209 (261)
T ss_pred hhhcCCccc--------cccCCCCceEecCHHHH------------ccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-
Confidence 976522111 11133457789999654 35678889999999999999998 899986432
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+...... .... .+.+..++..+.+++.+||..||++|||++++.+.|++
T Consensus 210 ----~~~~~~~~~-----~~~~------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 210 ----NHEVYDQIT-----AGYR------------MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred ----HHHHHHHHH-----hCCc------------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 111111100 0000 01112345678899999999999999999999999975
No 90
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.2e-35 Score=331.17 Aligned_cols=268 Identities=22% Similarity=0.344 Sum_probs=203.2
Q ss_pred hhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||.||+|... .+++.||+|+++.. .....+.+.+|+++++++ +|+||++++++|..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~--- 82 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTK--- 82 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEec---
Confidence 457999999999999999999753 34578999998743 233456788899999999 89999999998743
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCC---------------------------------------------------
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQP--------------------------------------------------- 779 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 779 (997)
.....+++|||+++++|.+++.......
T Consensus 83 -~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
T cd05054 83 -PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE 161 (337)
T ss_pred -CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence 3457899999999999999987532100
Q ss_pred ----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcccccccc
Q 001908 780 ----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSS 855 (997)
Q Consensus 780 ----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~ 855 (997)
....+++..+..++.||+.|++|||++ +|+||||||+||+++.++++||+|||+++.+...... ...
T Consensus 162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~------~~~ 232 (337)
T cd05054 162 GDELYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY------VRK 232 (337)
T ss_pred hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch------hhc
Confidence 012578999999999999999999999 9999999999999999999999999999876321110 111
Q ss_pred ccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhh
Q 001908 856 IGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVME 934 (997)
Q Consensus 856 ~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 934 (997)
....++..|+|||.+ .+..++.++|||||||++|||++ |..||....... .+... . ..
T Consensus 233 ~~~~~~~~y~aPE~~------------~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~---~-----~~ 291 (337)
T cd05054 233 GDARLPLKWMAPESI------------FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRR---L-----KE 291 (337)
T ss_pred cCCCCCccccCcHHh------------cCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHH---H-----hc
Confidence 223456789999654 45778999999999999999998 999986432111 11110 0 00
Q ss_pred hcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 935 TVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 935 ~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
...+ ..+..+..++.+++.+||+.+|++||++.|+++.|+++.++
T Consensus 292 ~~~~------------~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 292 GTRM------------RAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred cCCC------------CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000 01112345788999999999999999999999999998763
No 91
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=323.44 Aligned_cols=264 Identities=23% Similarity=0.368 Sum_probs=209.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+...+.++||+|-||+|..+... .+.+||||+++... .....+|.+|+++|.+++||||++++|+|.. ++..+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~-----DePic 611 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQ-----DDPLC 611 (807)
T ss_pred hheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeec-----CCchH
Confidence 45567899999999999999995 57999999998554 4456899999999999999999999999965 34799
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+|||++|+|.+|+.+.... ........+|+.||+.||+||.+. .+||||+.++|+|++.++++||+|||++
T Consensus 612 mI~EYmEnGDLnqFl~aheap----t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgms 684 (807)
T KOG1094|consen 612 MITEYMENGDLNQFLSAHELP----TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMS 684 (807)
T ss_pred HHHHHHhcCcHHHHHHhccCc----ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccc
Confidence 999999999999999987421 134556678999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh--CCCCCCcCcC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT--RRRPTNCMFQ 915 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt--g~~P~~~~~~ 915 (997)
+.+...++.. .....+-+..|||||.+ .-++++.++|||+||+++||+++ ...||....+
T Consensus 685 R~lysg~yy~------vqgr~vlpiRwmawEsi------------llgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~ 746 (807)
T KOG1094|consen 685 RNLYSGDYYR------VQGRAVLPIRWMAWESI------------LLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD 746 (807)
T ss_pred cccccCCcee------eecceeeeeeehhHHHH------------HhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH
Confidence 9876544433 23334567899999655 45889999999999999999876 7788875432
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
+ .+++-....++.. ... .-...+.-|+..++++|..||+.|-++||+++++...|.+.
T Consensus 747 e--~vven~~~~~~~~-------~~~------~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 747 E--QVVENAGEFFRDQ-------GRQ------VVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred H--HHHHhhhhhcCCC-------Ccc------eeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 2 1111111111111 100 01234556888999999999999999999999999988764
No 92
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4e-35 Score=322.43 Aligned_cols=267 Identities=26% Similarity=0.459 Sum_probs=206.1
Q ss_pred hhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
..+|.+.+.||+|+||.||++... .++..+|+|.+........+.+.+|++++++++|+||+++++++. .
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~ 78 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCV-----E 78 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----c
Confidence 357889999999999999999852 345679999987666666678999999999999999999999864 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCC-------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQ-------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH 825 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~ 825 (997)
.+..++||||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +++||||||+||++++
T Consensus 79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~ 155 (288)
T cd05093 79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGE 155 (288)
T ss_pred CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 45789999999999999999754310 1122489999999999999999999999 9999999999999999
Q ss_pred CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 826 DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 826 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
++.+|++|||.++....... ........++..|+|||.+ .+..++.++|||||||++|||++
T Consensus 156 ~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~sDiwslG~il~~l~t 217 (288)
T cd05093 156 NLLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESI------------MYRKFTTESDVWSLGVVLWEIFT 217 (288)
T ss_pred CCcEEeccCCccccccCCce------eecCCCCCccccccCHHHh------------ccCCCCchhhHHHHHHHHHHHHh
Confidence 99999999999986532111 1111223457789999654 35678899999999999999999
Q ss_pred -CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 906 -RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 906 -g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|..||..... .+.......... +. .+..++.++.+++.+||+.+|.+|||+.|+.+.
T Consensus 218 ~g~~p~~~~~~-----~~~~~~i~~~~~-----~~------------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~ 275 (288)
T cd05093 218 YGKQPWYQLSN-----NEVIECITQGRV-----LQ------------RPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSL 275 (288)
T ss_pred CCCCCCCCCCH-----HHHHHHHHcCCc-----CC------------CCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 8999864321 111111100000 00 011234568899999999999999999999999
Q ss_pred HHHHHHHh
Q 001908 985 LCAARQTL 992 (997)
Q Consensus 985 L~~~~~~~ 992 (997)
|+++.++.
T Consensus 276 l~~~~~~~ 283 (288)
T cd05093 276 LQNLAKAS 283 (288)
T ss_pred HHHHHHhc
Confidence 99988753
No 93
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.3e-35 Score=335.29 Aligned_cols=258 Identities=20% Similarity=0.270 Sum_probs=198.3
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.+.||+|+||+||+|+...+++.||+|++... .....+.+.+|+++++.++||||+++++++ ...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~-----~~~ 115 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF-----QDD 115 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----ecC
Confidence 456899999999999999999999999999999999632 223345678899999999999999999884 456
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++|+|.+++.... ++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~l~~~~-------l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~D 185 (370)
T cd05596 116 KYLYMVMEYMPGGDLVNLMSNYD-------IPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLAD 185 (370)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEe
Confidence 68999999999999999997643 67778888999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+....... ........||+.|+|||++... .....++.++|||||||++|||++|+.||...
T Consensus 186 fG~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~ 250 (370)
T cd05596 186 FGTCMKMDANG-------MVRCDTAVGTPDYISPEVLKSQ--------GGDGYYGRECDWWSVGVFLYEMLVGDTPFYAD 250 (370)
T ss_pred ccceeeccCCC-------cccCCCCCCCcCeECHHHhccC--------CCCCCCCCceeeeehhHHHHHHHhCCCCcCCC
Confidence 99997642211 1112345799999999887531 11345789999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE--RMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 983 (997)
. ............. ....+. ......++.+++.+|+..+|++ |+++.|+++
T Consensus 251 ~-----~~~~~~~i~~~~~-~~~~~~-------------~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 251 S-----LVGTYSKIMDHKN-SLTFPD-------------DIEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred C-----HHHHHHHHHcCCC-cCCCCC-------------cCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 1 1111111110000 000000 0012346678999999999988 999999965
No 94
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.8e-35 Score=330.83 Aligned_cols=243 Identities=26% Similarity=0.372 Sum_probs=192.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|+.+.+++.||+|++... .......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~~lv~E 75 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF-----QTKDRLCFVME 75 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCEEEEEEe
Confidence 4689999999999999999999999999643 233456788999999999999999999884 45668999999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 76 y~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~ 146 (328)
T cd05593 76 YVNGGELFFHLSRER------VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGI 146 (328)
T ss_pred CCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCC
Confidence 999999999987654 478899999999999999999999 99999999999999999999999999987531
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLH 921 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~ 921 (997)
.. ........||+.|+|||.+. +..++.++||||+||++|||++|+.||... ...
T Consensus 147 ~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslGvil~elltG~~Pf~~~-----~~~ 201 (328)
T cd05593 147 TD--------AATMKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ-----DHE 201 (328)
T ss_pred Cc--------ccccccccCCcCccChhhhc------------CCCCCccCCccccchHHHHHhhCCCCCCCC-----CHH
Confidence 11 11123357999999996553 567889999999999999999999998632 112
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLAK 984 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 984 (997)
+........ +..+ +.....++.+++.+|+..||++|| ++.|+++.
T Consensus 202 ~~~~~~~~~------~~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 202 KLFELILME------DIKF------------PRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHhccC------CccC------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 211111100 0000 112234677899999999999997 88888753
No 95
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.8e-35 Score=333.84 Aligned_cols=265 Identities=19% Similarity=0.227 Sum_probs=195.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.+.||+|+||.||+|.+..+++.||+|+.. ...+.+|++++++++||||+++++++. .....++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~-----~~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFT-----YNKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEE-----ECCeeEE
Confidence 57999999999999999999999999999999753 235678999999999999999999853 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|+|++ .++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+
T Consensus 161 v~e~~-~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~ 230 (391)
T PHA03212 161 ILPRY-KTDLYCYLAAKR------NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAAC 230 (391)
T ss_pred EEecC-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCccc
Confidence 99999 579999887654 378889999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC--
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG-- 916 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~-- 916 (997)
..... .........||+.|+|||++. +..++.++||||+||++|||+||+.||......
T Consensus 231 ~~~~~-------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~ 291 (391)
T PHA03212 231 FPVDI-------NANKYYGWAGTIATNAPELLA------------RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDG 291 (391)
T ss_pred ccccc-------cccccccccCccCCCChhhhc------------CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccc
Confidence 53111 111223457999999996553 567899999999999999999999886533211
Q ss_pred Ccc----HHHHHHhhc--chhhh----hhcCccc-------ccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 917 GLT----LHEFCKMAL--PEKVM----ETVDPSL-------LLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 917 ~~~----~~~~~~~~~--~~~~~----~~~d~~~-------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
... +........ +.... ...+... ................+.++.+++.+|++.||++|||++
T Consensus 292 ~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~ 371 (391)
T PHA03212 292 DCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAE 371 (391)
T ss_pred cCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHH
Confidence 101 111111100 00000 0000000 000000001112224466788999999999999999999
Q ss_pred HHHH
Q 001908 980 DVLA 983 (997)
Q Consensus 980 evl~ 983 (997)
|+++
T Consensus 372 elL~ 375 (391)
T PHA03212 372 ALLD 375 (391)
T ss_pred HHhc
Confidence 9985
No 96
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.7e-35 Score=341.30 Aligned_cols=275 Identities=22% Similarity=0.303 Sum_probs=194.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc---CCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---KGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~~ 754 (997)
.++|++.++||+|+||.||+|+...+++.||||++.... ....+|+.+++.++|+||+++++++....+ ....
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999999899999999885332 233579999999999999999987643222 1223
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEcc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSD 833 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~D 833 (997)
..++||||++ +++.+++..... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .+||+|
T Consensus 141 ~l~lvmE~~~-~~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~D 214 (440)
T PTZ00036 141 FLNVVMEFIP-QTVHKYMKHYAR--NNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCD 214 (440)
T ss_pred EEEEEEecCC-ccHHHHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeec
Confidence 5779999996 478877764321 112478899999999999999999999 999999999999999665 799999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+..... .......||+.|+|||++.. ...++.++||||+||++|||++|.+||...
T Consensus 215 FGla~~~~~~---------~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwSlGvil~elltG~~pf~~~ 274 (440)
T PTZ00036 215 FGSAKNLLAG---------QRSVSYICSRFYRAPELMLG-----------ATNYTTHIDLWSLGCIIAEMILGYPIFSGQ 274 (440)
T ss_pred cccchhccCC---------CCcccCCCCcCccCHHHhcC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999865221 11223568999999976532 245889999999999999999999999743
Q ss_pred cCCCccHHHHHHhh-cc-hhhhhhcCccccc-ccc----cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMA-LP-EKVMETVDPSLLL-AWS----DGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~-~~~----~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
... ..+....... .+ ........+.... .+. .......+...+.++.+++.+||..||++|||+.|+++
T Consensus 275 ~~~-~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 275 SSV-DQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred ChH-HHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 211 1111111110 00 0111111111100 000 00001112234567889999999999999999999974
No 97
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5.1e-35 Score=317.75 Aligned_cols=258 Identities=26% Similarity=0.412 Sum_probs=200.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCC---CcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|+++.+ ...||+|+++.. .......+.+|+.++++++|+||+++++++. ..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 77 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVT-----KS 77 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEe-----cC
Confidence 35789999999999999999998643 457999998743 3344567899999999999999999999853 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++++|.+++....+ .+++..+++++.|++.|++|||+. +|+||||||+||++++++.+|++|
T Consensus 78 ~~~~iv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~d 149 (266)
T cd05033 78 RPVMIITEYMENGSLDKFLRENDG-----KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSD 149 (266)
T ss_pred CceEEEEEcCCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECc
Confidence 578999999999999999987542 478999999999999999999998 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+++...... .........++..|+|||.+ .+..++.++||||||+++|||++ |..||..
T Consensus 150 fg~~~~~~~~~------~~~~~~~~~~~~~y~~Pe~~------------~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~ 211 (266)
T cd05033 150 FGLSRRLEDSE------ATYTTKGGKIPIRWTAPEAI------------AYRKFTSASDVWSFGIVMWEVMSYGERPYWD 211 (266)
T ss_pred cchhhcccccc------cceeccCCCCCccccChhhh------------ccCCCccccchHHHHHHHHHHHccCCCCCCC
Confidence 99998763111 01111123456789999644 45678899999999999999998 9999863
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.. ..+..... .... ..+.+..++..+.+++.+||+.+|++||++.|+++.|+++
T Consensus 212 ~~-----~~~~~~~~-----~~~~------------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 212 MS-----NQDVIKAV-----EDGY------------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CC-----HHHHHHHH-----HcCC------------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 31 11111110 0000 0001123356788999999999999999999999999875
No 98
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=2.8e-35 Score=335.82 Aligned_cols=268 Identities=23% Similarity=0.351 Sum_probs=203.3
Q ss_pred HHhhcCccCCcccccCcceEEEEEECC-----CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcC-CCCcceEEeeeecc
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLM-QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSI 748 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~ 748 (997)
...++|++.+.||+|+||.||+|++.. .+..||||+++.. .....+.+.+|+++++++. ||||++++++|.
T Consensus 34 ~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~-- 111 (400)
T cd05105 34 FPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACT-- 111 (400)
T ss_pred ccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEc--
Confidence 335688999999999999999998742 2347999999743 3344568899999999996 999999999964
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCC--------------------------------------------------
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQ-------------------------------------------------- 778 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------- 778 (997)
..+..++||||+++|+|.+++++....
T Consensus 112 ---~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (400)
T cd05105 112 ---KSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY 188 (400)
T ss_pred ---cCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence 345799999999999999998764210
Q ss_pred ----------------------------------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 779 ----------------------------------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 779 ----------------------------------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
.....+++..+.+++.|+++|++|||+. +|+||||||
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp 265 (400)
T cd05105 189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAA 265 (400)
T ss_pred chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCh
Confidence 0012377888899999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++.+||+|||+++....... ........++..|+|||.+ .+..++.++|||||||
T Consensus 266 ~Nill~~~~~~kL~DfGla~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DiwSlGv 327 (400)
T cd05105 266 RNVLLAQGKIVKICDFGLARDIMHDSN------YVSKGSTFLPVKWMAPESI------------FDNLYTTLSDVWSYGI 327 (400)
T ss_pred HhEEEeCCCEEEEEeCCcceecccccc------ccccCCcCCCcceEChhhh------------cCCCCCchhhHHHHHH
Confidence 999999999999999999976522111 1112223467889999655 3567889999999999
Q ss_pred HHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 899 MLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 899 vl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++|||++ |..||........ +... ..... ....+..++..+.+++.+||..+|++||+
T Consensus 328 il~ellt~g~~P~~~~~~~~~-~~~~--------~~~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt 386 (400)
T cd05105 328 LLWEIFSLGGTPYPGMIVDST-FYNK--------IKSGY------------RMAKPDHATQEVYDIMVKCWNSEPEKRPS 386 (400)
T ss_pred HHHHHHHCCCCCCcccchhHH-HHHH--------HhcCC------------CCCCCccCCHHHHHHHHHHCccCHhHCcC
Confidence 9999997 9999874321110 0000 00000 01112234667889999999999999999
Q ss_pred HHHHHHHHHHHHH
Q 001908 978 MRDVLAKLCAARQ 990 (997)
Q Consensus 978 ~~evl~~L~~~~~ 990 (997)
+.++.+.|+++.+
T Consensus 387 ~~~l~~~l~~l~~ 399 (400)
T cd05105 387 FLHLSDIVESLLP 399 (400)
T ss_pred HHHHHHHHHHHcC
Confidence 9999999988653
No 99
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-36 Score=329.11 Aligned_cols=256 Identities=21% Similarity=0.338 Sum_probs=212.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.|.+...||.|+||.||+|+.++++-..|.|++.....+..+++.-||+||..++||+||++++.| ..++.++|+
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ay-----y~enkLwil 107 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAY-----YFENKLWIL 107 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHH-----hccCceEEE
Confidence 466778899999999999999988888899999988888899999999999999999999999884 445689999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
.|||.||-.+..+-.-+. .+...++..+++|++.||.|||++ .|+|||+|+.|||++-+|.++++|||.+..
T Consensus 108 iEFC~GGAVDaimlEL~r-----~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAK 179 (1187)
T KOG0579|consen 108 IEFCGGGAVDAIMLELGR-----VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAK 179 (1187)
T ss_pred EeecCCchHhHHHHHhcc-----ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeeccccccc
Confidence 999999999988876542 488999999999999999999999 999999999999999999999999998865
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
. ..+......+.|||+|||||+... |.+.+.+|+.++||||||+.+.||..+.+|-... ..
T Consensus 180 n--------~~t~qkRDsFIGTPYWMAPEVvmC-------ET~KD~PYDykaDiWSlGITLIEMAqiEPPHhel----np 240 (1187)
T KOG0579|consen 180 N--------KSTRQKRDSFIGTPYWMAPEVVMC-------ETFKDQPYDYKADIWSLGITLIEMAQIEPPHHEL----NP 240 (1187)
T ss_pred c--------hhHHhhhccccCCcccccchheee-------ccccCCCchhhhhHHhhhhHHHHHhccCCCcccc----ch
Confidence 3 223445566899999999999876 8889999999999999999999999999995421 01
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+.-..... ..-.|. ..++..+...+.+++..|+..||..||++.++++
T Consensus 241 MRVllKia------KSePPT----------LlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 241 MRVLLKIA------KSEPPT----------LLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred HHHHHHHh------hcCCCc----------ccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 11111111 111111 2234556678889999999999999999999864
No 100
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.1e-35 Score=333.62 Aligned_cols=246 Identities=20% Similarity=0.277 Sum_probs=194.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCC-cEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENG-TFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|+++.++ ..||+|++... .....+.+.+|+++++.++||||+++++++ ...
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~ 103 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSF-----KDE 103 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEE-----EeC
Confidence 357999999999999999999876554 68999998632 233456788999999999999999999995 445
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++++||+|
T Consensus 104 ~~~~lv~Ey~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~D 174 (340)
T PTZ00426 104 SYLYLVLEFVIGGEFFTFLRRNK------RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTD 174 (340)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEec
Confidence 68999999999999999998754 478889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++.... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 175 FG~a~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlGvil~ell~G~~Pf~~~ 231 (340)
T PTZ00426 175 FGFAKVVDT-----------RTYTLCGTPEYIAPEILL------------NVGHGKAADWWTLGIFIYEILVGCPPFYAN 231 (340)
T ss_pred CCCCeecCC-----------CcceecCChhhcCHHHHh------------CCCCCccccccchhhHHHHHhcCCCCCCCC
Confidence 999975411 112357899999997664 456788999999999999999999999742
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
. ............. .. +......+.+++.+|++.||++|+ +++++++
T Consensus 232 ~-----~~~~~~~i~~~~~------~~------------p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 232 E-----PLLIYQKILEGII------YF------------PKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred C-----HHHHHHHHhcCCC------CC------------CCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 1 1111111100000 00 011233567899999999999995 7888765
No 101
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=4.3e-35 Score=321.46 Aligned_cols=268 Identities=25% Similarity=0.356 Sum_probs=201.1
Q ss_pred CccCCcccccCcceEEEEEE----CCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 681 FSSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
|++.+.||+|+||+||++.. ..+++.||+|+++... ......+.+|++++++++||||+++++++.. .....
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~~ 82 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSE---QGGKG 82 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEec---CCCce
Confidence 48889999999999988654 3467889999987443 3345678899999999999999999998753 23456
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... +++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+|++|||
T Consensus 83 ~~lv~e~~~~~~l~~~~~~~~-------l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 83 LQLIMEYVPLGSLRDYLPKHK-------LNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred EEEEecCCCCCCHHHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecc
Confidence 899999999999999997643 88999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++....... .........++..|+|||.+. +..++.++|||||||++|||+||..||.....
T Consensus 153 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~PE~~~------------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~ 215 (283)
T cd05080 153 LAKAVPEGHE-----YYRVREDGDSPVFWYAVECLK------------ENKFSYASDVWSFGVTLYELLTHCDSKQSPPK 215 (283)
T ss_pred cccccCCcch-----hhccCCCCCCCceeeCHhHhc------------ccCCCcccccHHHHHHHHHHHhCCCCCCCCcc
Confidence 9976532110 001112234566799996553 45678899999999999999999999864321
Q ss_pred CCccHHHHHHhhcc----hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALP----EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 916 ~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
. +.+....... ....+..+... ..+.+..++.++.+++.+||+.+|++|||++++++.|+++.
T Consensus 216 ~---~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 216 K---FEEMIGPKQGQMTVVRLIELLERGM--------RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred h---hhhhhcccccccchhhhhhhhhcCC--------CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1 1111111100 01111111111 01112345678899999999999999999999999998874
No 102
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.6e-35 Score=321.54 Aligned_cols=261 Identities=29% Similarity=0.509 Sum_probs=201.8
Q ss_pred hhcCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|.+.+.||+|+||.||+|+... +++.||+|+++..... ..+.+.+|++++++++|+||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----- 78 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCT----- 78 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEe-----
Confidence 3568889999999999999998753 3578999999754433 4578999999999999999999999954
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCC--------CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNG--------QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
.....++||||+++++|.+++..... ......+++.++..++.|++.|+.|||++ +++||||||+||++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili 155 (280)
T cd05049 79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLV 155 (280)
T ss_pred cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEE
Confidence 34689999999999999999987542 11223478889999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+.++.+|++|||.++....... ........+++.|+|||.+ .+..++.++|||||||++|||
T Consensus 156 ~~~~~~kl~d~g~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~e~ 217 (280)
T cd05049 156 GYDLVVKIGDFGMSRDVYTTDY------YRVGGHTMLPIRWMPPESI------------MYRKFTTESDVWSFGVVLWEI 217 (280)
T ss_pred cCCCeEEECCcccceecccCcc------eecCCCCcccceecChhhh------------ccCCcchhhhHHHHHHHHHHH
Confidence 9999999999999976522111 0111223457889999654 457789999999999999999
Q ss_pred Hh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 904 FT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 904 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
++ |..||.... ..+.......... ...+..++..+.+++.+||..||++||++.|++
T Consensus 218 ~~~g~~p~~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil 275 (280)
T cd05049 218 FTYGKQPWYGLS-----NEEVIECITQGRL-----------------LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIH 275 (280)
T ss_pred HhcCCCCCCCCC-----HHHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 99 999986331 1111111110000 000112356788999999999999999999999
Q ss_pred HHHH
Q 001908 983 AKLC 986 (997)
Q Consensus 983 ~~L~ 986 (997)
+.|+
T Consensus 276 ~~l~ 279 (280)
T cd05049 276 ERLQ 279 (280)
T ss_pred HHhh
Confidence 9886
No 103
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=6.2e-35 Score=319.45 Aligned_cols=261 Identities=25% Similarity=0.396 Sum_probs=202.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCc----EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.++|+..++||+|+||+||+|++..+++ +||+|+++.. .......+.+|+.+++.++|+||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT----- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-----
Confidence 4678899999999999999999876666 4899998643 33445678899999999999999999998743
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
...++++||+++|+|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||++++++.+||+
T Consensus 81 -~~~~l~~~~~~~g~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~ 151 (279)
T cd05109 81 -STVQLVTQLMPYGCLLDYVRENKD-----RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKIT 151 (279)
T ss_pred -CCcEEEEEcCCCCCHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEEC
Confidence 247899999999999999986532 378899999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 911 (997)
|||+++....... ........+++.|+|||.. .+..++.++|||||||++|||++ |..||.
T Consensus 152 dfG~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~ 213 (279)
T cd05109 152 DFGLARLLDIDET------EYHADGGKVPIKWMALESI------------LHRRFTHQSDVWSYGVTVWELMTFGAKPYD 213 (279)
T ss_pred CCCceeecccccc------eeecCCCccchhhCCHHHh------------ccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence 9999986522110 0011122356789999654 35678899999999999999998 899986
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... ..+....... . ..+.+..++.++.+++.+||..||++||++.++++.+..+..+
T Consensus 214 ~~~~--~~~~~~~~~~--------~------------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05109 214 GIPA--REIPDLLEKG--------E------------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARD 271 (279)
T ss_pred CCCH--HHHHHHHHCC--------C------------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcC
Confidence 4311 1111111100 0 0001112355788999999999999999999999999988765
Q ss_pred h
Q 001908 992 L 992 (997)
Q Consensus 992 ~ 992 (997)
.
T Consensus 272 ~ 272 (279)
T cd05109 272 P 272 (279)
T ss_pred C
Confidence 4
No 104
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=7.5e-35 Score=320.81 Aligned_cols=265 Identities=28% Similarity=0.477 Sum_probs=205.3
Q ss_pred hcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|.+.+.||+|+||.||+|++. .++..+|+|.+........+.+.+|++++++++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCG-----DG 79 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEc-----cC
Confidence 56888899999999999999864 245579999987666556678899999999999999999999864 34
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
+..++||||+++++|.+++...... .....+++..++.++.|++.|++|||++ +|+||||||+||++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~ 156 (291)
T cd05094 80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLV 156 (291)
T ss_pred CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEE
Confidence 5789999999999999999764310 0112478999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+.++.+||+|||+++....... ........++..|+|||.+ .+..++.++|||||||++|||
T Consensus 157 ~~~~~~~l~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~el 218 (291)
T cd05094 157 GANLLVKIGDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESI------------MYRKFTTESDVWSFGVILWEI 218 (291)
T ss_pred ccCCcEEECCCCcccccCCCce------eecCCCCCcceeecChHHh------------ccCCCCchhhHHHHHHHHHHH
Confidence 9999999999999976532211 1112234567889999654 456788999999999999999
Q ss_pred Hh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 904 FT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 904 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
+| |+.||..... .+........... ..+..++..+.+++.+||..+|++||++++++
T Consensus 219 ~t~g~~p~~~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~ 276 (291)
T cd05094 219 FTYGKQPWFQLSN-----TEVIECITQGRVL-----------------ERPRVCPKEVYDIMLGCWQREPQQRLNIKEIY 276 (291)
T ss_pred HhCCCCCCCCCCH-----HHHHHHHhCCCCC-----------------CCCccCCHHHHHHHHHHcccChhhCcCHHHHH
Confidence 99 9999864321 1111110000000 00112356788999999999999999999999
Q ss_pred HHHHHHHHH
Q 001908 983 AKLCAARQT 991 (997)
Q Consensus 983 ~~L~~~~~~ 991 (997)
+.|.++...
T Consensus 277 ~~l~~~~~~ 285 (291)
T cd05094 277 KILHALGKA 285 (291)
T ss_pred HHHHHHHhh
Confidence 999998764
No 105
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=1.3e-34 Score=314.66 Aligned_cols=262 Identities=24% Similarity=0.357 Sum_probs=203.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|+...+++.||||+++. ........+.+|++++++++||||+++++++. ..+.
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFI-----EDNE 76 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEE-----ECCe
Confidence 478899999999999999999998999999998753 23344567889999999999999999999854 3458
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++|+||+++|+|.+++...... ...++...++.++.|++.|++|||++ +++|+||||+||+++.++.++++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 77 LNIVLELADAGDLSQMIKYFKKQ--KRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCcHHHHHHHhhhc--cCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999988653311 12478889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+....... .......|+..|+|||.+. +..++.++||||+|+++|||++|+.||.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~------------~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~ 211 (267)
T cd08228 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIH------------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 211 (267)
T ss_pred cceeccchh--------HHHhcCCCCccccChhhhc------------cCCCCchhhHHHHHHHHHHHhcCCCCCccccc
Confidence 987652211 1112346888999996553 45678899999999999999999999863211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
...++.... .....+.. .....+..+.+++.+||..+|++||++.++++.++.++
T Consensus 212 ---~~~~~~~~~-----~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 212 ---NLFSLCQKI-----EQCDYPPL-----------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ---cHHHHHHHH-----hcCCCCCC-----------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 112221111 00001110 01234567889999999999999999999999998764
No 106
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.4e-35 Score=321.20 Aligned_cols=263 Identities=23% Similarity=0.381 Sum_probs=199.8
Q ss_pred HHhhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
.++++|++.+.||+|+||.||+|.++ ..+..||+|++... .......+.+|+.+++.++|+||+++++++.
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--- 79 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS--- 79 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 35678999999999999999999864 23567999998633 2234567889999999999999999999853
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCC----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQP----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH 825 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~ 825 (997)
.....++||||+++|+|.+++.+..... ....+++..+..++.|++.|++|||+. +++||||||+||++++
T Consensus 80 --~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 80 --QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAE 154 (277)
T ss_pred --CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcC
Confidence 4557899999999999999997643211 123467889999999999999999998 9999999999999999
Q ss_pred CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 826 DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 826 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
++.+|++|||+++........ .......+++.|+|||.+ .++.++.++|||||||++|||++
T Consensus 155 ~~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~el~~ 216 (277)
T cd05062 155 DFTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMSPESL------------KDGVFTTYSDVWSFGVVLWEIAT 216 (277)
T ss_pred CCCEEECCCCCccccCCccee------ecCCCCccCHhhcChhHh------------hcCCcCchhHHHHHHHHHHHHHc
Confidence 999999999998765322110 111123457789999654 35678999999999999999999
Q ss_pred -CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 906 -RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 906 -g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|..||.... ..+.......... + ..+..++..+.+++.+||+.+|++|||+.|+++.
T Consensus 217 ~~~~p~~~~~-----~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 274 (277)
T cd05062 217 LAEQPYQGMS-----NEQVLRFVMEGGL-----L------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 274 (277)
T ss_pred CCCCCCCCCC-----HHHHHHHHHcCCc-----C------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 788876321 1121111100000 0 0011235578899999999999999999999998
Q ss_pred HH
Q 001908 985 LC 986 (997)
Q Consensus 985 L~ 986 (997)
|+
T Consensus 275 l~ 276 (277)
T cd05062 275 IK 276 (277)
T ss_pred hh
Confidence 76
No 107
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=6.1e-35 Score=317.35 Aligned_cols=257 Identities=21% Similarity=0.302 Sum_probs=199.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||+|+...+++.||+|++..........+.+|+.++++++||||+++++++. ..+..++
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~-----~~~~~~i 83 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYL-----SREKLWI 83 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEE-----eCCEEEE
Confidence 57999999999999999999998899999999997554445567889999999999999999999854 3458899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.++++... .+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||++.
T Consensus 84 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~ 154 (267)
T cd06646 84 CMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAA 154 (267)
T ss_pred EEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccce
Confidence 999999999999997653 478889999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......|+..|+|||.+... ....++.++||||+||++|||++|+.||......
T Consensus 155 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~~---------~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~-- 215 (267)
T cd06646 155 KITATI--------AKRKSFIGTPYWMAPEVAAVE---------KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-- 215 (267)
T ss_pred eecccc--------cccCccccCccccCHhHcccc---------cCCCCcchhhHHHHHHHHHHHHhCCCCccccchh--
Confidence 652111 112234688899999866321 2345778999999999999999999998633111
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...... ... ....+... .....+..+.+++.+||..+|++||+++++++.
T Consensus 216 --~~~~~~--~~~--~~~~~~~~----------~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 216 --RALFLM--SKS--NFQPPKLK----------DKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred --hhheee--ecC--CCCCCCCc----------cccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 000000 000 00000000 011234577899999999999999999999864
No 108
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=4.5e-35 Score=332.36 Aligned_cols=262 Identities=19% Similarity=0.256 Sum_probs=197.4
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
+....++|++.+.||+|+||.||+|+.+.+++.||+|++... .....+.+.+|+++++.++||||+++++++
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~----- 112 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF----- 112 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----
Confidence 334457899999999999999999999999999999998632 223345678899999999999999999984
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.+++..++||||+++|+|.+++.... ++...+..++.||+.||+|||++ +|+||||||+||++++++.+|
T Consensus 113 ~~~~~~~lv~Ey~~gg~L~~~l~~~~-------~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~k 182 (370)
T cd05621 113 QDDKYLYMVMEYMPGGDLVNLMSNYD-------VPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLK 182 (370)
T ss_pred EcCCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEE
Confidence 45678999999999999999997543 67788999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+...... ........||+.|+|||++.... ..+.++.++||||+||++|||++|+.||
T Consensus 183 L~DFG~a~~~~~~~-------~~~~~~~~gt~~Y~aPE~~~~~~--------~~~~~~~~~DiwSlG~ilyell~G~~Pf 247 (370)
T cd05621 183 LADFGTCMKMDETG-------MVRCDTAVGTPDYISPEVLKSQG--------GDGYYGRECDWWSVGVFLFEMLVGDTPF 247 (370)
T ss_pred EEecccceecccCC-------ceecccCCCCcccCCHHHHhccC--------CCCCCCcccCEEeehHHHHHHHhCCCCC
Confidence 99999997652111 11123457999999998875311 1234788999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE--RMEMRDVLAK 984 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 984 (997)
.... ........ .+......+ +........+.+++..|+..+|.+ |+++.|+++.
T Consensus 248 ~~~~-----~~~~~~~i--------~~~~~~~~~------p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 248 YADS-----LVGTYSKI--------MDHKNSLNF------PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCCC-----HHHHHHHH--------HhCCcccCC------CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 7431 11111111 000000000 001112345668888898755543 8899998764
No 109
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.9e-35 Score=345.06 Aligned_cols=254 Identities=20% Similarity=0.240 Sum_probs=199.3
Q ss_pred cCccCCcccccCcceEEEEEECCC-CcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGEN-GTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.|.+.+.||+|++|.||+|....+ ++.||+|.+..........+.+|+++++.++||||+++++++. ..+..++
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~-----~~~~~~l 142 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFK-----SDDKLLL 142 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE-----ECCEEEE
Confidence 488899999999999999998766 7889999876555555667888999999999999999999954 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.++++.... ...++++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+
T Consensus 143 v~E~~~gg~L~~~l~~~~~--~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~ 217 (478)
T PTZ00267 143 IMEYGSGGDLNKQIKQRLK--EHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSK 217 (478)
T ss_pred EEECCCCCCHHHHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCce
Confidence 9999999999998875321 122478889999999999999999999 99999999999999999999999999998
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... ........+||+.|+|||++ .+..++.++|||||||++|||++|+.||...
T Consensus 218 ~~~~~~------~~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~----- 274 (478)
T PTZ00267 218 QYSDSV------SLDVASSFCGTPYYLAPELW------------ERKRYSKKADMWSLGVILYELLTLHRPFKGP----- 274 (478)
T ss_pred ecCCcc------ccccccccCCCccccCHhHh------------CCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC-----
Confidence 652211 11123345799999999655 3567899999999999999999999998632
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+........ ..++ .+..+...+.+++..||..||++||++.+++.
T Consensus 275 ~~~~~~~~~~~~----~~~~-------------~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 275 SQREIMQQVLYG----KYDP-------------FPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred CHHHHHHHHHhC----CCCC-------------CCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 112211111100 0000 01123456789999999999999999999864
No 110
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=4.6e-35 Score=317.14 Aligned_cols=255 Identities=24% Similarity=0.425 Sum_probs=198.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|... ++..||+|.+.... ...+.+.+|+.++++++|+||+++++++ ...+..+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 77 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVV-----TKEEPIY 77 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEE-----cCCCCcE
Confidence 467899999999999999999976 66789999886433 2356889999999999999999999884 3456789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++|+|.++++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 78 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~ 150 (261)
T cd05072 78 IITEYMAKGSLLDFLKSDEG----GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLA 150 (261)
T ss_pred EEEecCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccc
Confidence 99999999999999976432 2478889999999999999999998 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
....... ........++..|+|||.+ .+..++.++|||||||++|||+| |+.||......
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~ 211 (261)
T cd05072 151 RVIEDNE-------YTAREGAKFPIKWTAPEAI------------NFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS 211 (261)
T ss_pred eecCCCc-------eeccCCCccceecCCHHHh------------ccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH
Confidence 7652211 0111223456789999654 35668889999999999999998 99998642111
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
....... ..... +....++.++.+++.+||+.+|++||+++++.+.|++
T Consensus 212 --~~~~~~~--------~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 212 --DVMSALQ--------RGYRM------------PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --HHHHHHH--------cCCCC------------CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111100 00000 0011234567899999999999999999999999875
No 111
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=5.7e-35 Score=332.52 Aligned_cols=259 Identities=21% Similarity=0.288 Sum_probs=196.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+...+++.||||++... .......+.+|+++++.++|+||+++++++ ...+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF-----QDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE-----EcCCe
Confidence 4789999999999999999999999999999999643 233446678899999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 76 LYLIMEYLPGGDMMTLLMKKD------TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred EEEEECCCCCcHHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 999999999999999998754 478889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccc------------------------------cccccccccccccccCCcchhcccccCccccCCCC
Q 001908 836 LARFLFARPFDTSME------------------------------TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGS 885 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~------------------------------~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~ 885 (997)
+++............ ........+||+.|+|||++. +.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------------~~ 214 (364)
T cd05599 147 LCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL------------QT 214 (364)
T ss_pred cceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc------------CC
Confidence 987652211000000 000112346999999996653 56
Q ss_pred CCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHh
Q 001908 886 EASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGV 965 (997)
Q Consensus 886 ~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~ 965 (997)
.++.++|||||||++|||++|..||.... ..+......... .... . +......+.+.+++.
T Consensus 215 ~~~~~~DiwSlG~il~el~~G~~Pf~~~~-----~~~~~~~i~~~~------~~~~--~------~~~~~~s~~~~~li~ 275 (364)
T cd05599 215 GYNKECDWWSLGVIMYEMLVGYPPFCSDN-----PQETYRKIINWK------ETLQ--F------PDEVPLSPEAKDLIK 275 (364)
T ss_pred CCCCeeeeecchhHHHHhhcCCCCCCCCC-----HHHHHHHHHcCC------CccC--C------CCCCCCCHHHHHHHH
Confidence 78899999999999999999999997432 111111110000 0000 0 000012345678888
Q ss_pred hcCCCCCCCCCC---HHHHHH
Q 001908 966 ACSMESPIERME---MRDVLA 983 (997)
Q Consensus 966 ~cl~~dP~~Rps---~~evl~ 983 (997)
+|+. +|.+|++ +.|+++
T Consensus 276 ~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 276 RLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred HHcc-CHhhcCCCCCHHHHhc
Confidence 9996 9999998 888865
No 112
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=7.7e-35 Score=322.48 Aligned_cols=264 Identities=27% Similarity=0.401 Sum_probs=200.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcE--EEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTF--VAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~--vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|.++.++.. +|+|.++.. .......+.+|++++.++ +|+||+++++++. ..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~-----~~ 80 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HR 80 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEEC-----CC
Confidence 35788999999999999999998767654 577776532 334456788999999999 8999999999853 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
+..++||||+++|+|.++++...... ....+++.+++.++.|++.|++|||+. +|+||||||+||++
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili 157 (303)
T cd05088 81 GYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILV 157 (303)
T ss_pred CCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEe
Confidence 57999999999999999998654211 112478999999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+.++.+||+|||++..... ........++..|+|||.+. +..++.++|||||||++|||
T Consensus 158 ~~~~~~kl~dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el 216 (303)
T cd05088 158 GENYVAKIADFGLSRGQEV---------YVKKTMGRLPVRWMAIESLN------------YSVYTTNSDVWSYGVLLWEI 216 (303)
T ss_pred cCCCcEEeCccccCcccch---------hhhcccCCCcccccCHHHHh------------ccCCcccccchhhhhHHHHH
Confidence 9999999999999863210 01111123466799996553 45678899999999999999
Q ss_pred Hh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 904 FT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 904 lt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
+| |..||.... ..+..... + ..... ..+..++.++.+++.+||+.+|++||++.+++
T Consensus 217 lt~g~~p~~~~~-----~~~~~~~~-~----~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 274 (303)
T cd05088 217 VSLGGTPYCGMT-----CAELYEKL-P----QGYRL------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQIL 274 (303)
T ss_pred HhcCCCCcccCC-----hHHHHHHH-h----cCCcC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 98 999986331 11111111 0 00000 00112345678999999999999999999999
Q ss_pred HHHHHHHHHh
Q 001908 983 AKLCAARQTL 992 (997)
Q Consensus 983 ~~L~~~~~~~ 992 (997)
+.++++.+..
T Consensus 275 ~~l~~~~~~~ 284 (303)
T cd05088 275 VSLNRMLEER 284 (303)
T ss_pred HHHHHHHHhh
Confidence 9999876654
No 113
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.6e-35 Score=328.25 Aligned_cols=245 Identities=23% Similarity=0.337 Sum_probs=189.4
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHH---hhcCCCCcceEEeeeeccCcCCCc
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVL---RNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l---~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
|++.+.||+|+||.||+|.++.+++.||||+++.. .....+.+.+|++++ +.++||||+++++++ ...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~-----~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF-----QTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE-----EcCC
Confidence 66788999999999999999989999999999743 223345666776655 556899999999984 4456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..|+||||+++|+|..+++.. .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 76 ~~~lv~E~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Df 145 (324)
T cd05589 76 HVCFVMEYAAGGDLMMHIHTD-------VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADF 145 (324)
T ss_pred EEEEEEcCCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcc
Confidence 899999999999999988653 388999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++.... .........|++.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 146 g~~~~~~~--------~~~~~~~~~g~~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~G~~pf~~~~ 205 (324)
T cd05589 146 GLCKEGMG--------FGDRTSTFCGTPEFLAPEVLT------------ETSYTRAVDWWGLGVLIYEMLVGESPFPGDD 205 (324)
T ss_pred cCCccCCC--------CCCcccccccCccccCHhHhc------------CCCCCcccchhhHHHHHHHHHhCCCCCCCCC
Confidence 99864311 111223457999999996553 5678899999999999999999999987431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..+........ .+. .+...+..+.+++.+||..||++|| ++.++++
T Consensus 206 -----~~~~~~~i~~~------~~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 206 -----EEEVFDSIVND------EVR------------YPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----HHHHHHHHHhC------CCC------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 11111111000 000 0112345677999999999999999 4555544
No 114
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-34 Score=312.46 Aligned_cols=249 Identities=26% Similarity=0.379 Sum_probs=192.4
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
+.||+|+||.||+|+++.+++.||+|.+... .......+.+|++++++++||||++++++|. .....++||||+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~lv~e~~ 75 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQPIYIVMELV 75 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-----CCCCeEEEEeec
Confidence 4699999999999999889999999987633 3344567899999999999999999999864 345789999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++.... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+......
T Consensus 76 ~~~~L~~~~~~~~-----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 76 QGGDFLTFLRTEG-----PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDG 147 (252)
T ss_pred cCCcHHHHHHhCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCcccccc
Confidence 9999999997543 1378899999999999999999999 9999999999999999999999999998754211
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHE 922 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~ 922 (997)
.. ........++..|+|||.+ .++.++.++|||||||++|||++ |..||...... ....
T Consensus 148 ~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~ 207 (252)
T cd05084 148 VY------ASTGGMKQIPVKWTAPEAL------------NYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTRE 207 (252)
T ss_pred cc------cccCCCCCCceeecCchhh------------cCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHH
Confidence 10 0001112235679999654 35668889999999999999998 88888632110 0000
Q ss_pred HHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 923 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
. ...... ...+..++..+.+++.+|+..+|++|||+.++.+.|+
T Consensus 208 ~------------~~~~~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 208 A------------IEQGVR--------LPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred H------------HHcCCC--------CCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 0 000000 0111233567889999999999999999999999875
No 115
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.5e-35 Score=340.62 Aligned_cols=265 Identities=22% Similarity=0.281 Sum_probs=204.6
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC-
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK- 751 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~- 751 (997)
....++|++.+.||+|+||+||+|+...+++.||||++... .......+.+|+..+..++|+|++++...+...+..
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 34457999999999999999999999989999999998643 344556788999999999999999988765432211
Q ss_pred --CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 752 --GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 752 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.....++||||+++|+|.++++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~--~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKT--NRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCE
Confidence 112478999999999999999764321 23578899999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+++....... ........||+.|+|||.+. +..++.++|||||||++|||++|+.|
T Consensus 183 kL~DFGls~~~~~~~~------~~~~~~~~Gt~~Y~aPE~~~------------~~~~s~k~DVwSlGvilyeLltG~~P 244 (496)
T PTZ00283 183 KLGDFGFSKMYAATVS------DDVGRTFCGTPYYVAPEIWR------------RKPYSKKADMFSLGVLLYELLTLKRP 244 (496)
T ss_pred EEEecccCeecccccc------ccccccccCCcceeCHHHhC------------CCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999999976532111 11223457999999996553 56789999999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|... ...+......... .+ +.+..+++++.+++.+||+.||++||++.++++.
T Consensus 245 f~~~-----~~~~~~~~~~~~~----~~-------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 245 FDGE-----NMEEVMHKTLAGR----YD-------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCC-----CHHHHHHHHhcCC----CC-------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 8632 2222222211110 00 0112235678899999999999999999999763
No 116
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.9e-34 Score=317.19 Aligned_cols=273 Identities=24% Similarity=0.344 Sum_probs=196.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhc---CCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNT---RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~ 754 (997)
+|++.+.||+|+||+||+|+.+.+++.||+|+++... ......+.+|+++++.+ +||||+++++++.........
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788999999999999999999999999999986432 22234556777777665 799999999987654444456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||++ ++|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~df 152 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP----PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADF 152 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcc
Confidence 7899999996 599999876542 2378899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++..... .......||..|+|||++. +..++.++||||+||++|||++|++||....
T Consensus 153 g~~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~ 211 (288)
T cd07863 153 GLARIYSCQ---------MALTPVVVTLWYRAPEVLL------------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNS 211 (288)
T ss_pred CccccccCc---------ccCCCccccccccCchHhh------------CCCCCCcchhhhHHHHHHHHHhCCcCcCCCC
Confidence 999765211 1122346789999996553 4668899999999999999999999986432
Q ss_pred CCCccHHHHHHhh-cch--hhhhhcCcccccccccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA-LPE--KVMETVDPSLLLAWSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~-~~~--~~~~~~d~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+.+..... .+. .+....... ...+.... ......+....+.+++.+|+..||++|||+.|++.
T Consensus 212 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 212 EA-DQLGKIFDLIGLPPEDDWPRDVTLP-RGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred HH-HHHHHHHHHhCCCChhhCccccccc-ccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11 1111111110 000 000000000 00000000 00111234456789999999999999999999875
No 117
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=326.04 Aligned_cols=248 Identities=25% Similarity=0.413 Sum_probs=197.5
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEE---EEEec-ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVA---VKILN-LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vA---vK~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+...+||+|+|-+||+|.+..+|..|| ||.-+ ...+...+.|..|+++|+.++|+||+++|.++.+.. .....
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~---n~~in 119 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD---NKTIN 119 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCC---Cceee
Confidence 456789999999999999999999887 33322 234555689999999999999999999999976532 35688
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFg~ 836 (997)
+|+|.|..|+|..|.++.+ ..+...++.|++||++||.|||++ .|+|+|||||=+||||+.+ |.|||+|.|+
T Consensus 120 ~iTEL~TSGtLr~Y~kk~~------~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGL 192 (632)
T KOG0584|consen 120 FITELFTSGTLREYRKKHR------RVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGL 192 (632)
T ss_pred eeeecccCCcHHHHHHHhc------cCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhH
Confidence 9999999999999999877 478889999999999999999997 6899999999999999854 8999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+... ........|||.|||||... ..|...+||||||++++||+|+.+||..
T Consensus 193 Atl~r----------~s~aksvIGTPEFMAPEmYE-------------E~YnE~VDVYaFGMCmLEMvT~eYPYsE---- 245 (632)
T KOG0584|consen 193 ATLLR----------KSHAKSVIGTPEFMAPEMYE-------------ENYNELVDVYAFGMCMLEMVTSEYPYSE---- 245 (632)
T ss_pred HHHhh----------ccccceeccCccccChHHHh-------------hhcchhhhhhhhhHHHHHHHhccCChhh----
Confidence 98751 12223378999999998764 5689999999999999999999999862
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.....+.++ ++..-+.|.-....+ .+++.++|.+|+.. .++|||+.|+++
T Consensus 246 C~n~AQIYK-----KV~SGiKP~sl~kV~-----------dPevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 246 CTNPAQIYK-----KVTSGIKPAALSKVK-----------DPEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred hCCHHHHHH-----HHHcCCCHHHhhccC-----------CHHHHHHHHHHhcC-chhccCHHHHhh
Confidence 122223222 222223332221111 24567899999999 999999999975
No 118
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-34 Score=330.72 Aligned_cols=259 Identities=21% Similarity=0.280 Sum_probs=192.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.|+..+.||+|+||+||+|+...+++.||+|++... .......+.+|++++++++|+||+++++++ .+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~-----~~~~~~ 76 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF-----QDKDNL 76 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE-----ecCCEE
Confidence 578899999999999999999999999999999643 234456789999999999999999999985 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++++||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl 147 (381)
T cd05626 77 YFVMDYIPGGDMMSLLIRME------VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGL 147 (381)
T ss_pred EEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcC
Confidence 99999999999999998754 377888899999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCc---------------------------------------cccccccccccccccccCCcchhcccccC
Q 001908 837 ARFLFARPFDTS---------------------------------------METQSSSIGIKGTVGYVPPGNIAKMLNLP 877 (997)
Q Consensus 837 a~~~~~~~~~~~---------------------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~ 877 (997)
++.......... ...........||+.|+|||++.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------ 221 (381)
T cd05626 148 CTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL------ 221 (381)
T ss_pred CcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc------
Confidence 864311000000 00000112357999999996653
Q ss_pred ccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHH
Q 001908 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECL 957 (997)
Q Consensus 878 ~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 957 (997)
+..++.++|||||||++|||+||+.||...... ........... .... +......
T Consensus 222 ------~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~----~~~~~i~~~~~-----~~~~----------~~~~~~s 276 (381)
T cd05626 222 ------RKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPT----ETQLKVINWEN-----TLHI----------PPQVKLS 276 (381)
T ss_pred ------CCCCCCccceeehhhHHHHHHhCCCCCcCCCHH----HHHHHHHcccc-----ccCC----------CCCCCCC
Confidence 466889999999999999999999999743211 11100000000 0000 0000123
Q ss_pred HHHHHHHhh--cCCCCCCCCCCHHHHHH
Q 001908 958 VTVIRIGVA--CSMESPIERMEMRDVLA 983 (997)
Q Consensus 958 ~~l~~li~~--cl~~dP~~Rps~~evl~ 983 (997)
++..+++.+ |+..+|..||++.|+++
T Consensus 277 ~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 277 PEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 455677776 55667777999999976
No 119
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=1.3e-34 Score=314.98 Aligned_cols=259 Identities=27% Similarity=0.459 Sum_probs=200.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCc---EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|+..+.||+|+||.||+|+...+++ .+|+|+++.. .....+.+..|++++++++|+|++++.+++. ..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 78 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVT-----KF 78 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEc-----cC
Confidence 4578889999999999999999875554 7999998744 3444577899999999999999999999854 44
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++++|.+++..... .+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~d 150 (268)
T cd05063 79 KPAMIITEYMENGALDKYLRDHDG-----EFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSD 150 (268)
T ss_pred CCcEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECC
Confidence 578999999999999999976432 378889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||++........ ..........+..|+|||.+ .+..++.++|||||||++|||++ |+.||..
T Consensus 151 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Dv~slG~il~ell~~g~~p~~~ 213 (268)
T cd05063 151 FGLSRVLEDDPE-----GTYTTSGGKIPIRWTAPEAI------------AYRKFTSASDVWSFGIVMWEVMSFGERPYWD 213 (268)
T ss_pred Cccceecccccc-----cceeccCCCcCceecCHHHh------------hcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence 999876522111 01111112235679999654 35678899999999999999998 9999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.. ..+....... .. ..+....++.++.+++.+||..+|++||++.++++.|.++
T Consensus 214 ~~-----~~~~~~~i~~---------~~--------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 214 MS-----NHEVMKAIND---------GF--------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CC-----HHHHHHHHhc---------CC--------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 31 1111111100 00 0011123456788999999999999999999999999875
No 120
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.4e-34 Score=319.63 Aligned_cols=263 Identities=24% Similarity=0.389 Sum_probs=200.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc--EEEEEEecc-cchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT--FVAVKILNL-MQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~--~vAvK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||.||+|..+.++. .+|+|.++. ......+.+.+|+++++++ +||||+++++++. ..+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 76 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACE-----NRG 76 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEc-----cCC
Confidence 478899999999999999999876664 468888874 2334456789999999999 7999999999854 345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
..++|+||+++|+|.+++.+..... ....+++..++.++.|++.|++|||+. +|+||||||+||+++
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~ 153 (297)
T cd05089 77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVG 153 (297)
T ss_pred cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEEC
Confidence 7899999999999999997643211 112478899999999999999999998 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.++.+||+|||++..... .........+..|+|||.+ .+..++.++|||||||++|||+
T Consensus 154 ~~~~~kl~dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwSlG~il~el~ 212 (297)
T cd05089 154 ENLASKIADFGLSRGEEV---------YVKKTMGRLPVRWMAIESL------------NYSVYTTKSDVWSFGVLLWEIV 212 (297)
T ss_pred CCCeEEECCcCCCccccc---------eeccCCCCcCccccCchhh------------ccCCCCchhhHHHHHHHHHHHH
Confidence 999999999999863210 0011112235579999654 3567889999999999999999
Q ss_pred h-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 T-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+ |..||.... ..+....... ...+ ..+..++..+.+++.+||..+|.+||++.++++
T Consensus 213 t~g~~pf~~~~-----~~~~~~~~~~-----~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 270 (297)
T cd05089 213 SLGGTPYCGMT-----CAELYEKLPQ-----GYRM------------EKPRNCDDEVYELMRQCWRDRPYERPPFAQISV 270 (297)
T ss_pred cCCCCCCCCCC-----HHHHHHHHhc-----CCCC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 8 999986431 1111111100 0000 011123457889999999999999999999999
Q ss_pred HHHHHHHHh
Q 001908 984 KLCAARQTL 992 (997)
Q Consensus 984 ~L~~~~~~~ 992 (997)
.|+++.+..
T Consensus 271 ~l~~~~~~~ 279 (297)
T cd05089 271 QLSRMLEAR 279 (297)
T ss_pred HHHHHHHhh
Confidence 999888754
No 121
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.4e-34 Score=323.93 Aligned_cols=247 Identities=21% Similarity=0.317 Sum_probs=190.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+++.+++.||+|+++.. .....+.+.+|+.+++++ +||||+++++++ ......++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE-----EcCCEEEEEE
Confidence 4689999999999999999999999999743 233456678899999988 799999999984 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.+.. .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~ 146 (329)
T cd05588 76 EFVSGGDLMFHMQRQR------KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCcccccc
Confidence 9999999999987654 488999999999999999999999 9999999999999999999999999998743
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC---C
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG---G 917 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~---~ 917 (997)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||+..... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~ 206 (329)
T cd05588 147 IR--------PGDTTSTFCGTPNYIAPEILR------------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPD 206 (329)
T ss_pred cc--------CCCccccccCCccccCHHHHc------------CCCCCCccceechHHHHHHHHHCCCCccccccccccc
Confidence 11 111223457899999996653 567889999999999999999999999742211 1
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC------HHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME------MRDVL 982 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps------~~evl 982 (997)
....++......... .. .+......+.+++.+|++.||++||+ +.|++
T Consensus 207 ~~~~~~~~~~~~~~~-----~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 207 QNTEDYLFQVILEKQ-----IR------------IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred ccchHHHHHHHHcCC-----CC------------CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 111111111110000 00 01112346789999999999999997 55664
No 122
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.2e-35 Score=318.80 Aligned_cols=261 Identities=25% Similarity=0.445 Sum_probs=198.4
Q ss_pred hcCccCCcccccCcceEEEEEEC----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.+|++.++||+|+||.||+|... ..+..||+|.+... .......+.+|++++++++||||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 79 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVT-----QE 79 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEe-----cC
Confidence 46788899999999999999853 45678999998743 3334467889999999999999999999853 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCC-----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQ-----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~-----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
+..++||||+++++|.+++...... .....+++.+++.++.|++.|++|||++ +|+||||||+||+
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nil 156 (283)
T cd05090 80 QPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNIL 156 (283)
T ss_pred CceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEE
Confidence 5789999999999999999643210 0112478889999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+++++.+|++|||+++....... ........++..|+|||.+ .+..++.++|||||||++||
T Consensus 157 i~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~e 218 (283)
T cd05090 157 IGEQLHVKISDLGLSREIYSADY------YRVQPKSLLPIRWMPPEAI------------MYGKFSSDSDIWSFGVVLWE 218 (283)
T ss_pred EcCCCcEEeccccccccccCCcc------eecccCCCccceecChHHh------------ccCCCCchhhhHHHHHHHHH
Confidence 99999999999999986532211 1112223456789999654 35678899999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|++ |..||.... ..+.......... .+.+..++.++.+++.+||+.||++||++.++
T Consensus 219 l~~~g~~p~~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i 276 (283)
T cd05090 219 IFSFGLQPYYGFS-----NQEVIEMVRKRQL-----------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDI 276 (283)
T ss_pred HHcCCCCCCCCCC-----HHHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHH
Confidence 999 888986321 1111111110000 00112235678899999999999999999999
Q ss_pred HHHHHH
Q 001908 982 LAKLCA 987 (997)
Q Consensus 982 l~~L~~ 987 (997)
.+.|.+
T Consensus 277 ~~~l~~ 282 (283)
T cd05090 277 HTRLRS 282 (283)
T ss_pred HHHhhc
Confidence 998864
No 123
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1e-34 Score=314.45 Aligned_cols=256 Identities=29% Similarity=0.430 Sum_probs=198.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||.||+|.+. +++.||+|.++... ...+.+.+|++++++++|+||+++++++. ..+..
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCT-----LEEPI 76 (261)
T ss_pred chhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEe-----cCCCe
Confidence 3467899999999999999999986 56789999987433 23467889999999999999999999853 45578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.... ...+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+
T Consensus 77 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~ 149 (261)
T cd05068 77 YIVTELMKYGSLLEYLQGGA----GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGL 149 (261)
T ss_pred eeeeecccCCcHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcce
Confidence 99999999999999997654 12478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
++....... ........+..|+|||.+ .+..++.++||||||+++|||+| |+.||....
T Consensus 150 ~~~~~~~~~-------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~- 209 (261)
T cd05068 150 ARVIKEDIY-------EAREGAKFPIKWTAPEAA------------LYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMT- 209 (261)
T ss_pred EEEccCCcc-------cccCCCcCceeccCcccc------------ccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCC-
Confidence 987632111 111112234689999544 45678899999999999999999 999986321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+..... . ..... +.+..++.++.+++.+|++.+|++||++.++.+.|++
T Consensus 210 ----~~~~~~~~-~----~~~~~------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 210 ----NAEVLQQV-D----QGYRM------------PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred ----HHHHHHHH-H----cCCCC------------CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11111100 0 00000 0111234678899999999999999999999999975
No 124
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-36 Score=302.62 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=206.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
-|.+..+||+|+||.||+|.++++|+.+|+|.+.... ..+++.+|+.+|++++.+++|++||.|.. ...+++|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s--DLQEIIKEISIMQQC~S~yVVKYYGSYFK-----~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT--DLQEIIKEISIMQQCKSKYVVKYYGSYFK-----HSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc--hHHHHHHHHHHHHHcCCchhhhhhhhhcc-----CCceEee
Confidence 3678899999999999999999999999999986543 45788999999999999999999998533 3469999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
||||..|+..+.++.++. ++.+.++..+.+.-++||+|||.. .-+|||||+.|||++.+|.+|++|||.|-.
T Consensus 107 MEYCGAGSiSDI~R~R~K-----~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQ 178 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRK-----PLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQ 178 (502)
T ss_pred hhhcCCCcHHHHHHHhcC-----CccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccch
Confidence 999999999999998763 588899999999999999999998 889999999999999999999999999976
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
+. .+-.......||+.|||||++.. -.|..++||||+|+...||..|++||.+...
T Consensus 179 LT--------DTMAKRNTVIGTPFWMAPEVI~E------------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHP---- 234 (502)
T KOG0574|consen 179 LT--------DTMAKRNTVIGTPFWMAPEVIEE------------IGYDTKADIWSLGITAIEMAEGRPPYSDIHP---- 234 (502)
T ss_pred hh--------hhHHhhCccccCcccccHHHHHH------------hccchhhhHhhhcchhhhhhcCCCCcccccc----
Confidence 52 23345566889999999988863 4688999999999999999999999874311
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+ +....+ .-++......+++...++-+++++|+...|++|-|+-++++
T Consensus 235 ---M-------RAIFMI------PT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 235 ---M-------RAIFMI------PTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred ---c-------ceeEec------cCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 0 000000 00112223457788889999999999999999999998865
No 125
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.3e-34 Score=324.16 Aligned_cols=243 Identities=21% Similarity=0.320 Sum_probs=187.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+.+.+++.||+|+++.. .....+.+.+|+.++.++ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTESRLFFVI 75 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE-----EeCCEEEEEE
Confidence 4699999999999999999999999999743 233456678899988877 899999999984 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~ 146 (329)
T cd05618 76 EYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 146 (329)
T ss_pred eCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccc
Confidence 9999999999887654 478889999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC---
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG--- 917 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~--- 917 (997)
... ........||+.|+|||++. +..++.++|||||||++|||++|+.||.......
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~ 206 (329)
T cd05618 147 LRP--------GDTTSTFCGTPNYIAPEILR------------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 206 (329)
T ss_pred cCC--------CCccccccCCccccCHHHHc------------CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcc
Confidence 111 11223457899999996553 5678899999999999999999999996322111
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
.....+........ +.. .+......+.+++.+||+.||++||++
T Consensus 207 ~~~~~~~~~~i~~~-----~~~------------~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 207 QNTEDYLFQVILEK-----QIR------------IPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred cccHHHHHHHHhcC-----CCC------------CCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11111111110000 000 011223457799999999999999984
No 126
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.9e-35 Score=329.21 Aligned_cols=242 Identities=24% Similarity=0.345 Sum_probs=190.4
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|+.+.+++.||+|+++.. .......+.+|+++++.++||||+++++++ ...+..++|||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~-----~~~~~~~lv~E 75 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF-----QTHDRLCFVME 75 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE-----EcCCEEEEEEe
Confidence 4689999999999999989999999999743 233446678899999999999999999884 44568999999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
|+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~ 146 (325)
T cd05594 76 YANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEG 146 (325)
T ss_pred CCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCCCCeec
Confidence 999999999987654 47889999999999999999997 6 8999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... ........||+.|+|||++. +..++.++|||||||++|||+||+.||.... .
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~tG~~Pf~~~~-----~ 201 (325)
T cd05594 147 IKD--------GATMKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD-----H 201 (325)
T ss_pred CCC--------CcccccccCCcccCCHHHHc------------cCCCCCccccccccceeeeeccCCCCCCCCC-----H
Confidence 211 11122356999999996653 5678899999999999999999999986321 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
.+........ .... +.....++.+++.+|++.||++|+ +++++++
T Consensus 202 ~~~~~~i~~~------~~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 202 EKLFELILME------EIRF------------PRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHhcC------CCCC------------CCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 1111111000 0000 111244677899999999999997 8888875
No 127
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=2.1e-34 Score=327.26 Aligned_cols=208 Identities=25% Similarity=0.346 Sum_probs=172.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+...+++.||+|+++... ......+.+|++++++++|+||+++++++ .+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~-----~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF-----QDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE-----ecCCe
Confidence 47889999999999999999999899999999996432 23446778899999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++++||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 76 LYLIMEFLPGGDMMTLLMKKD------TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred EEEEEcCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 999999999999999998754 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCc---------------------------cccccccccccccccccCCcchhcccccCccccCCCCCCC
Q 001908 836 LARFLFARPFDTS---------------------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888 (997)
Q Consensus 836 ~a~~~~~~~~~~~---------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~ 888 (997)
+|+.......... ..........+||+.|+|||++. +..++
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~------------~~~~~ 214 (363)
T cd05628 147 LCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM------------QTGYN 214 (363)
T ss_pred CcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc------------CCCCC
Confidence 9976522110000 00001112457999999996653 56788
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCc
Q 001908 889 VTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 889 ~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
.++|||||||++|||++|+.||..
T Consensus 215 ~~~DvwSlGvil~ell~G~~Pf~~ 238 (363)
T cd05628 215 KLCDWWSLGVIMYEMLIGYPPFCS 238 (363)
T ss_pred CchhhhhhHHHHHHHHhCCCCCCC
Confidence 999999999999999999999974
No 128
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=1.9e-34 Score=316.88 Aligned_cols=273 Identities=23% Similarity=0.312 Sum_probs=206.7
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
++.+..+.++|++.+.||+|+||.||+|....+++.+|+|+++... .....+.+|+.+++++ +|+||+++++++....
T Consensus 10 ~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 88 (286)
T cd06638 10 FDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD 88 (286)
T ss_pred eecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc
Confidence 3445567789999999999999999999999899999999986432 2235678899999999 6999999999876544
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
....+..++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+
T Consensus 89 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 89 VKNGDQLWLVLELCNGGSVTDLVKGFLKR--GERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cCCCCeEEEEEeecCCCCHHHHHHHhhcc--CccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 45567899999999999999988643211 12478888999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
|++|||.++...... .......|++.|+|||.+.. +...+..++.++||||+||++|||++|+.|
T Consensus 164 kl~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~~~~Dv~slGvi~~el~~g~~p 228 (286)
T cd06638 164 KLVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIAC-------EQQLDSTYDARCDVWSLGITAIELGDGDPP 228 (286)
T ss_pred EEccCCceeecccCC--------CccccccCCCcccChhhhch-------hhhccccccchhhhhhHHHHHHHHhcCCCC
Confidence 999999987652211 11223468999999987753 112245678899999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|..... ....... ... ..+.. ..+..+..++.+++.+||..||++|||+.|+++.
T Consensus 229 ~~~~~~----~~~~~~~--~~~----~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 229 LADLHP----MRALFKI--PRN----PPPTL----------HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred CCCCch----hHHHhhc--ccc----CCCcc----------cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 874311 1111000 000 00000 0011123467899999999999999999999874
No 129
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.8e-34 Score=311.66 Aligned_cols=250 Identities=24% Similarity=0.377 Sum_probs=191.1
Q ss_pred cccccCcceEEEEEEC--CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEee
Q 001908 686 MIGQGSFGSVYKGILG--ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
.||+|+||.||+|.++ ..+..||+|++.... ....+.+.+|++++++++|+||++++++|. .+..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~------~~~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE------AEALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc------CCCeEEEEEe
Confidence 4899999999999875 445679999987543 333467899999999999999999999863 2367999999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhccc
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~ 842 (997)
+++|+|.+++..... .+++..+++++.|++.|++|||++ +++||||||+||+++.++.+|++|||.+.....
T Consensus 76 ~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 76 ASGGPLNKFLSGKKD-----EITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGA 147 (257)
T ss_pred CCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccC
Confidence 999999999975431 478899999999999999999999 999999999999999999999999999975422
Q ss_pred CCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHH
Q 001908 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLH 921 (997)
Q Consensus 843 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~ 921 (997)
... .........++..|+|||.+. +..++.++|||||||++||+++ |..||...... .+.
T Consensus 148 ~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~ 208 (257)
T cd05115 148 DDS-----YYKARSAGKWPLKWYAPECIN------------FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVM 208 (257)
T ss_pred Ccc-----ceeccCCCCCCcccCCHHHHc------------cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHH
Confidence 110 001111223457899996543 4568889999999999999996 99998743211 111
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
..+... .....+..+++++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 209 ~~~~~~--------------------~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 209 SFIEQG--------------------KRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHCC--------------------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 111000 00011123456788999999999999999999999999865
No 130
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=2.5e-34 Score=313.48 Aligned_cols=264 Identities=22% Similarity=0.329 Sum_probs=202.0
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcC-CC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFK-GA 753 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~-~~ 753 (997)
.++..|++.+.||+|+||.||+|....+++.||+|++.... .....+..|+++++++ +|+|++++++++...... ..
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 35677889999999999999999999899999999986443 3346788999999998 799999999997653322 13
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++++|.+++..... ..+++..+..++.|++.|++|||++ +|+||||||+||++++++.+||+|
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~D 154 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 154 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEcc
Confidence 568999999999999999986432 2478889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||++..... .........|+..|+|||.+... ...+..++.++||||+||++|||++|+.||...
T Consensus 155 fg~~~~~~~--------~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~ 219 (272)
T cd06637 155 FGVSAQLDR--------TVGRRNTFIGTPYWMAPEVIACD-------ENPDATYDFKSDLWSLGITAIEMAEGAPPLCDM 219 (272)
T ss_pred CCCceeccc--------ccccCCcccccccccCHhHhccc-------cCcCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 999875411 11122345689999999877531 112456888999999999999999999998643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ...... . .....+.. ....++.++.+++.+||..+|.+|||+.|+++
T Consensus 220 ~~----~~~~~~-~-----~~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 220 HP----MRALFL-I-----PRNPAPRL-----------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CH----HHHHHH-H-----hcCCCCCC-----------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 21 111100 0 00000000 00123456789999999999999999999875
No 131
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.8e-35 Score=330.25 Aligned_cols=260 Identities=22% Similarity=0.328 Sum_probs=200.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+...+++.||+|+++.. .......+.+|+++++.++|+||+++++++ ...++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF-----QDEEH 75 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe-----ecCCe
Confidence 4688999999999999999999989999999999743 224456788999999999999999999884 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 76 LYLVMEYMPGGDLMNLLIRKD------VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 999999999999999998763 478889999999999999999998 99999999999999999999999999
Q ss_pred cchhcccCCCCC---------------------ccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhH
Q 001908 836 LARFLFARPFDT---------------------SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894 (997)
Q Consensus 836 ~a~~~~~~~~~~---------------------~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dvw 894 (997)
+++......... ............||+.|+|||++. +..++.++|||
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Diw 214 (350)
T cd05573 147 LCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR------------GTPYGLECDWW 214 (350)
T ss_pred CCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHc------------CCCCCCceeeE
Confidence 998653321000 000011223456999999996654 45789999999
Q ss_pred HHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 895 SLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 895 SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
||||++|||++|+.||.... ..+....... .. .... .+.....++++.+++..|+. ||++
T Consensus 215 SlG~il~ell~g~~Pf~~~~-----~~~~~~~i~~-----~~-~~~~--------~p~~~~~~~~~~~li~~ll~-dp~~ 274 (350)
T cd05573 215 SLGVILYEMLYGFPPFYSDT-----LQETYNKIIN-----WK-ESLR--------FPPDPPVSPEAIDLICRLLC-DPED 274 (350)
T ss_pred ecchhhhhhccCCCCCCCCC-----HHHHHHHHhc-----cC-Cccc--------CCCCCCCCHHHHHHHHHHcc-Chhh
Confidence 99999999999999987432 1111111100 00 0000 00000134567899999997 9999
Q ss_pred CCC-HHHHHHH
Q 001908 975 RME-MRDVLAK 984 (997)
Q Consensus 975 Rps-~~evl~~ 984 (997)
||+ +.|+++.
T Consensus 275 R~~s~~~ll~h 285 (350)
T cd05573 275 RLGSFEEIKSH 285 (350)
T ss_pred cCCCHHHHhcC
Confidence 999 9999863
No 132
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.3e-34 Score=330.28 Aligned_cols=276 Identities=21% Similarity=0.253 Sum_probs=196.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.++||+|+||.||+|....+++.||+|++... .....+.+.+|+++++.++|+||+++++++...+.......|
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 478899999999999999999889999999998632 233456788999999999999999999986543322223789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+. ++|.+++.... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 81 lv~e~~~-~~l~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ------PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred EEeeccc-cCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccce
Confidence 9999995 68888886543 478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... ........+|+.|+|||.+.. ...++.++||||+||++|||++|+.||......
T Consensus 151 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~- 211 (372)
T cd07853 151 RVEEPDE-------SKHMTQEVVTQYYRAPEILMG-----------SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI- 211 (372)
T ss_pred eecccCc-------cccCCCCCcCCCcCCHHHHcC-----------CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH-
Confidence 7542111 111223467899999976542 234788999999999999999999999743211
Q ss_pred ccHHHHHHhhc-c--hhhhhhc---Ccccccc-cccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMAL-P--EKVMETV---DPSLLLA-WSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~-~--~~~~~~~---d~~~~~~-~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..+........ + ....... ...+... ..... ......+...++.+++.+|++.||++|||+.|+++.
T Consensus 212 ~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 212 QQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred HHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 01111110000 0 0000000 0000000 00000 000011224567899999999999999999999863
No 133
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=333.80 Aligned_cols=258 Identities=25% Similarity=0.391 Sum_probs=209.7
Q ss_pred CccCCcccccCcceEEEEEECCCCc----EEEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
....++||+|+||+||+|.|-..|+ +||+|++.. ...+..+++..|+-+|.+++|||+++++|+|... .
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------~ 771 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------T 771 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------h
Confidence 4557899999999999999965554 689999863 3445568899999999999999999999998653 3
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
..+|++|++.|+|.+|++..++ .+-....+.|..|||+||.|||++ +.|||||.++||||.+-..+||.|||
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~-----~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfg 843 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRD-----NIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFG 843 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhc-----cccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecc
Confidence 8899999999999999998663 366788899999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
+|+...+.... .......-.+.|||= |.+....|+.++|||||||.+||++| |..||+...
T Consensus 844 la~ll~~d~~e------y~~~~gK~pikwmal------------e~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~ 905 (1177)
T KOG1025|consen 844 LAKLLAPDEKE------YSAPGGKVPIKWMAL------------ESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP 905 (1177)
T ss_pred hhhccCccccc------ccccccccCcHHHHH------------HHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence 99987432211 111112234567776 45556889999999999999999999 999987542
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.. + +...++.+.+.+++.-|..+++.++.+||..|+..||+++++..++.+...+.
T Consensus 906 ~~-----e-----------------I~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardp 961 (1177)
T KOG1025|consen 906 AE-----E-----------------IPDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDP 961 (1177)
T ss_pred HH-----H-----------------hhHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCc
Confidence 21 1 11112344456778889999999999999999999999999999999876554
No 134
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=6.5e-35 Score=326.23 Aligned_cols=242 Identities=23% Similarity=0.299 Sum_probs=188.9
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCC-CcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHR-NLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~ 755 (997)
+|++.+.||+|+||.||+|+.+.+++.||||+++.. .....+.+..|+++++.++|+ +|+++++++ ...+.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QTMDR 75 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE-----EcCCE
Confidence 578899999999999999999989999999999743 234456778899999999765 577787774 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 999999999999999997654 377889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... .........||+.|+|||++ .+..++.++||||+||++|||+||+.||....
T Consensus 147 ~~~~~~~--------~~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwslGvil~elltG~~pf~~~~- 205 (324)
T cd05587 147 MCKENIF--------GGKTTRTFCGTPDYIAPEII------------AYQPYGKSVDWWAFGVLLYEMLAGQPPFDGED- 205 (324)
T ss_pred cceecCC--------CCCceeeecCCccccChhhh------------cCCCCCcccchhhhHHHHHHHHhCCCCCCCCC-
Confidence 9864311 11122345789999999655 35678899999999999999999999997431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
..+........ .... +.....++.+++.+|+..||++|++.
T Consensus 206 ----~~~~~~~i~~~------~~~~------------~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 206 ----EDELFQSIMEH------NVSY------------PKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----HHHHHHHHHcC------CCCC------------CCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 11111111000 0000 01123456789999999999999976
No 135
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.7e-34 Score=328.01 Aligned_cols=264 Identities=17% Similarity=0.242 Sum_probs=199.3
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
..++....++|++.+.||+|+||.||+|+++.+++.||+|++... .....+.+.+|+++++.++||||+++++++
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~-- 112 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF-- 112 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--
Confidence 344555668999999999999999999999999999999998632 223345678899999999999999999884
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
......++||||+++|+|.+++.... ++...+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 113 ---~~~~~~~lv~Ey~~gg~L~~~~~~~~-------~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~ 179 (371)
T cd05622 113 ---QDDRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSG 179 (371)
T ss_pred ---EcCCEEEEEEcCCCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCC
Confidence 44568999999999999999997643 67788889999999999999999 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||+|+...... ........||+.|+|||++.... ....++.++||||+||++|||++|+
T Consensus 180 ~ikL~DfG~a~~~~~~~-------~~~~~~~~gt~~y~aPE~l~~~~--------~~~~~~~~~DiwSlGvilyell~G~ 244 (371)
T cd05622 180 HLKLADFGTCMKMNKEG-------MVRCDTAVGTPDYISPEVLKSQG--------GDGYYGRECDWWSVGVFLYEMLVGD 244 (371)
T ss_pred CEEEEeCCceeEcCcCC-------cccccCcccCccccCHHHHhccC--------CCccCCCccceeehhHHHHHHHhCC
Confidence 99999999997652211 11123457999999998875311 1234788999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcch-hhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPE-KVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE--RMEMRDVLAK 984 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~~ 984 (997)
.||.... ........... ...... ........+.+++..|+..++.+ |+++.|+++.
T Consensus 245 ~Pf~~~~-----~~~~~~~i~~~~~~~~~~---------------~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 245 TPFYADS-----LVGTYSKIMNHKNSLTFP---------------DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCCCC-----HHHHHHHHHcCCCcccCC---------------CcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 9997431 11111111000 000000 01122345678999999844433 7788888774
No 136
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.4e-35 Score=323.83 Aligned_cols=239 Identities=23% Similarity=0.335 Sum_probs=185.4
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+...+++.||+|+++.. .....+.+..|.+++... +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 4699999999999999989999999999743 223345556677777654 899999999884 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 76 e~~~gg~L~~~~~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~ 146 (316)
T cd05592 76 EYLNGGDLMFHIQSSG------RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKEN 146 (316)
T ss_pred cCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeEC
Confidence 9999999999997654 478889999999999999999999 9999999999999999999999999999754
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||.... .
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslG~il~ell~G~~Pf~~~~-----~ 201 (316)
T cd05592 147 MNG--------EGKASTFCGTPDYIAPEILK------------GQKYNESVDWWSFGVLLYEMLIGQSPFHGED-----E 201 (316)
T ss_pred CCC--------CCccccccCCccccCHHHHc------------CCCCCCcccchhHHHHHHHHHhCCCCCCCCC-----H
Confidence 211 11223457899999996553 5678899999999999999999999997431 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
.+....... ..+.. +..+..++.+++.+||..||++||++.+
T Consensus 202 ~~~~~~i~~------~~~~~------------~~~~~~~~~~ll~~~l~~~P~~R~~~~~ 243 (316)
T cd05592 202 DELFDSILN------DRPHF------------PRWISKEAKDCLSKLFERDPTKRLGVDG 243 (316)
T ss_pred HHHHHHHHc------CCCCC------------CCCCCHHHHHHHHHHccCCHHHcCCChH
Confidence 121111100 00100 1112345678999999999999998753
No 137
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.9e-34 Score=317.50 Aligned_cols=263 Identities=24% Similarity=0.376 Sum_probs=199.7
Q ss_pred cCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+|++.+.||+|+||.||+|+... ....+|+|++.... ......+.+|+++++.++||||+++++.|. ..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 75 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACS-----QD 75 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEe-----cC
Confidence 47788999999999999998742 23578999886433 334567889999999999999999999854 34
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCC------------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQ------------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
+..++++||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +|+|||
T Consensus 76 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~d 152 (290)
T cd05045 76 GPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRD 152 (290)
T ss_pred CCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhh
Confidence 5789999999999999998764211 1123478999999999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHH
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwS 895 (997)
|||+||++++++.+||+|||+++....... ........++..|+|||.+ .+..++.++||||
T Consensus 153 ikp~nill~~~~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~apE~~------------~~~~~~~~~Di~s 214 (290)
T cd05045 153 LAARNVLVAEGRKMKISDFGLSRDVYEEDS------YVKRSKGRIPVKWMAIESL------------FDHIYTTQSDVWS 214 (290)
T ss_pred hhhheEEEcCCCcEEeccccccccccCccc------hhcccCCCCCccccCHHHH------------ccCCcchHhHHHH
Confidence 999999999999999999999976522111 0111223456789999654 3566889999999
Q ss_pred HHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 896 LGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 896 lGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
|||++|||+| |..||.... ..+... ..+.... ...+..++.++.+++.+||+.+|++
T Consensus 215 lG~~l~el~t~g~~p~~~~~-----~~~~~~---------~~~~~~~--------~~~~~~~~~~~~~~i~~cl~~~P~~ 272 (290)
T cd05045 215 FGVLLWEIVTLGGNPYPGIA-----PERLFN---------LLKTGYR--------MERPENCSEEMYNLMLTCWKQEPDK 272 (290)
T ss_pred HHHHHHHHHhcCCCCCCCCC-----HHHHHH---------HHhCCCC--------CCCCCCCCHHHHHHHHHHccCCccc
Confidence 9999999999 999986321 111111 1110000 0011223457889999999999999
Q ss_pred CCCHHHHHHHHHHHHH
Q 001908 975 RMEMRDVLAKLCAARQ 990 (997)
Q Consensus 975 Rps~~evl~~L~~~~~ 990 (997)
||+++|+++.|+++..
T Consensus 273 Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 273 RPTFADISKELEKMMV 288 (290)
T ss_pred CCCHHHHHHHHHHHHh
Confidence 9999999999998764
No 138
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.1e-34 Score=315.23 Aligned_cols=248 Identities=25% Similarity=0.333 Sum_probs=189.5
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||+||+++++.+++.||+|++.... ....+.+..|+++++.++|+||+++.+++ ......++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF-----QTKTDLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE-----cCCCeEEEEEeCC
Confidence 699999999999999899999999986322 22335678899999999999999999874 4456899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++|+|.+++..... ....+++..+..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||.+......
T Consensus 76 ~~g~L~~~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 150 (280)
T cd05608 76 NGGDLRYHIYNVDE--ENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDG 150 (280)
T ss_pred CCCCHHHHHHhccc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCC
Confidence 99999988865321 122478999999999999999999999 9999999999999999999999999998754221
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
. .......||+.|+|||.+. +..++.++|||||||++|||++|+.||....... ...+.
T Consensus 151 ~--------~~~~~~~g~~~y~aPE~~~------------~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~ 209 (280)
T cd05608 151 Q--------SKTKGYAGTPGFMAPELLQ------------GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKEL 209 (280)
T ss_pred C--------ccccccCCCcCccCHHHhc------------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHH
Confidence 1 1122356899999996553 5678899999999999999999999997432111 11111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..... .... ..+...+..+.+++.+||+.||++|| ++.++++
T Consensus 210 ~~~~~--------~~~~----------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 210 KQRIL--------NDSV----------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHhhc--------ccCC----------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 11100 0000 01122355678999999999999999 6666664
No 139
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.2e-34 Score=324.30 Aligned_cols=268 Identities=22% Similarity=0.375 Sum_probs=201.0
Q ss_pred hhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||+||+|.+. .+++.||||+++... ....+.+.+|++++.++ +|+||++++++|..
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~--- 82 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK--- 82 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeec---
Confidence 457999999999999999999852 467889999997432 33456788999999999 68999999998743
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCC---------------------------------------------------
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQP--------------------------------------------------- 779 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~--------------------------------------------------- 779 (997)
.....++||||+++|+|.+++.......
T Consensus 83 -~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (343)
T cd05103 83 -PGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV 161 (343)
T ss_pred -CCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence 2346899999999999999997642100
Q ss_pred ----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcc
Q 001908 780 ----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849 (997)
Q Consensus 780 ----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 849 (997)
....+++..+.+++.|+++|++|||++ +|+||||||+||+++.++++|++|||+++.......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~---- 234 (343)
T cd05103 162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD---- 234 (343)
T ss_pred hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcc----
Confidence 001367888899999999999999999 999999999999999999999999999976522111
Q ss_pred ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhc
Q 001908 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMAL 928 (997)
Q Consensus 850 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~ 928 (997)
........++..|+|||.+ .+..++.++|||||||++|||++ |..||...... .......
T Consensus 235 --~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~----~~~~~~~- 295 (343)
T cd05103 235 --YVRKGDARLPLKWMAPETI------------FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID----EEFCRRL- 295 (343)
T ss_pred --hhhcCCCCCCcceECcHHh------------cCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc----HHHHHHH-
Confidence 0111123456789999654 35678899999999999999997 89998643211 1111100
Q ss_pred chhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 929 PEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 929 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
....... .+....+++.+++..||+.+|++||++.|+++.|+.+.++
T Consensus 296 ----~~~~~~~------------~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 296 ----KEGTRMR------------APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred ----hccCCCC------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 0000000 0011234678999999999999999999999999998764
No 140
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.3e-34 Score=312.68 Aligned_cols=251 Identities=30% Similarity=0.451 Sum_probs=194.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.+.||+|+||.||+|.++ ++..+|+|++.... .....+.+|++++++++|+||+++++++. ..+..++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l 76 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCT-----KQRPIFI 76 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEc-----CCCceEE
Confidence 46888999999999999999986 56789999986332 23356888999999999999999999853 4457899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +|+||||||+||++++++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~ 148 (256)
T cd05059 77 VTEYMANGCLLNYLRERKG-----KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLAR 148 (256)
T ss_pred EEecCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccce
Confidence 9999999999999986542 478999999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
...... ........++..|+|||.+ .+..++.++|||||||++|||++ |+.||.....
T Consensus 149 ~~~~~~-------~~~~~~~~~~~~y~~Pe~~------------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-- 207 (256)
T cd05059 149 YVLDDQ-------YTSSQGTKFPVKWAPPEVF------------DYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-- 207 (256)
T ss_pred eccccc-------ccccCCCCCCccccCHHHh------------ccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--
Confidence 652211 1111122345679999654 35678889999999999999999 8999864311
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
.+..... ...... ..+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 208 ---~~~~~~~-----~~~~~~------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 208 ---SEVVESV-----SAGYRL------------YRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred ---HHHHHHH-----HcCCcC------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 1111110 000000 01112456788999999999999999999999886
No 141
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.6e-34 Score=316.40 Aligned_cols=261 Identities=26% Similarity=0.442 Sum_probs=200.3
Q ss_pred hcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|+..++||+|+||.||+|... .++..+|+|.+..........+.+|++++++++|+||+++++++. ..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCT-----EG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEe-----cC
Confidence 57888999999999999999752 346689999987666666778999999999999999999999854 34
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCC---------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQ---------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~---------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
+..+++|||+++++|.+++...... .....+++..++.++.|++.|++|||+. +++||||||+||+++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~ 156 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVG 156 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEc
Confidence 5789999999999999999865311 1112478899999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
+++.+||+|||+++...... .........+++.|+|||.+ .+..++.++|||||||++|||+
T Consensus 157 ~~~~~kL~dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~el~ 218 (280)
T cd05092 157 QGLVVKIGDFGMSRDIYSTD------YYRVGGRTMLPIRWMPPESI------------LYRKFTTESDIWSFGVVLWEIF 218 (280)
T ss_pred CCCCEEECCCCceeEcCCCc------eeecCCCccccccccCHHHh------------ccCCcCchhhHHHHHHHHHHHH
Confidence 99999999999997552211 01111223456789999644 4567899999999999999999
Q ss_pred h-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 T-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+ |.+||..... .+....... ... ...+..++..+.+++.+||..||++||+++|+.+
T Consensus 219 ~~g~~p~~~~~~-----~~~~~~~~~-----~~~------------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~ 276 (280)
T cd05092 219 TYGKQPWYQLSN-----TEAIECITQ-----GRE------------LERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS 276 (280)
T ss_pred cCCCCCCccCCH-----HHHHHHHHc-----Ccc------------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 8 8999863211 111100000 000 0011133566889999999999999999999999
Q ss_pred HHHH
Q 001908 984 KLCA 987 (997)
Q Consensus 984 ~L~~ 987 (997)
.|++
T Consensus 277 ~l~~ 280 (280)
T cd05092 277 RLQA 280 (280)
T ss_pred HHhC
Confidence 8863
No 142
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-34 Score=322.24 Aligned_cols=237 Identities=26% Similarity=0.363 Sum_probs=186.8
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+.+.+++.||+|+++.. .....+.+..|.++++.. +||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~-----~~~~~~~iv~ 75 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF-----QTPDRLFFVM 75 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE-----EcCCEEEEEE
Confidence 4689999999999999989999999998642 233456677888888876 699999999984 4566899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.+.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 Ey~~~g~L~~~i~~~~------~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~ 146 (320)
T cd05590 76 EFVNGGDLMFHIQKSR------RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 146 (320)
T ss_pred cCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeec
Confidence 9999999999998754 478889999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||.+. +..++.++||||+||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~-----~ 201 (320)
T cd05590 147 IF--------NGKTTSTFCGTPDYIAPEILQ------------EMLYGPSVDWWAMGVLLYEMLCGHAPFEAEN-----E 201 (320)
T ss_pred Cc--------CCCcccccccCccccCHHHHc------------CCCCCCccchhhhHHHHHHHhhCCCCCCCCC-----H
Confidence 11 111223457899999997654 4668889999999999999999999997431 2
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
.+.......... ..+ .....++.+++.+|++.||++||++
T Consensus 202 ~~~~~~i~~~~~---~~~---------------~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 202 DDLFEAILNDEV---VYP---------------TWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHHHHhcCCC---CCC---------------CCCCHHHHHHHHHHcccCHHHCCCC
Confidence 222111111000 000 1123467799999999999999998
No 143
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=6.4e-34 Score=309.22 Aligned_cols=262 Identities=25% Similarity=0.383 Sum_probs=204.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|....+++.||+|.++. ......+.+.+|++++++++|+|++++++++. ..+.
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~-----~~~~ 76 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFI-----ENNE 76 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeee-----cCCe
Confidence 578999999999999999999998999999998863 22334578899999999999999999999854 3568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++..... ....+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++++|||
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEecCCCCCHHHHHHHhcc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 8999999999999999875321 122478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+....... .......++..|+|||.+ .+..++.++|||||||++|+|++|+.||....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~y~apE~~------------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~- 210 (267)
T cd08224 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERI------------HENGYNFKSDIWSLGCLLYEMAALQSPFYGDK- 210 (267)
T ss_pred eeeeccCCC--------cccceecCCccccCHHHh------------ccCCCCchhcHHHHHHHHHHHHHCCCCcccCC-
Confidence 987542211 111234578899999654 35678889999999999999999999986321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
....+...... ....+.. .....+..+.+++.+||..+|++||++.++++.++.++
T Consensus 211 --~~~~~~~~~~~-----~~~~~~~-----------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 211 --MNLYSLCKKIE-----KCDYPPL-----------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred --ccHHHHHhhhh-----cCCCCCC-----------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 11111111100 0000000 01134557889999999999999999999999998865
No 144
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=2.8e-34 Score=315.15 Aligned_cols=252 Identities=23% Similarity=0.308 Sum_probs=194.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.|+..+.||+|+||+||++....+++.||+|++.... ......+.+|++++++++|+||+++++++ ...+..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~~~~~~ 75 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKDAL 75 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee-----cCCCeE
Confidence 3778899999999999999998899999999986422 22235567899999999999999999884 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.++|+|||+
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~ 148 (285)
T cd05605 76 CLVLTLMNGGDLKFHIYNMGN----PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGL 148 (285)
T ss_pred EEEEeccCCCcHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCC
Confidence 999999999999998875431 2478899999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+..... ........|+..|+|||.+. +..++.++||||+||++|||++|+.||......
T Consensus 149 ~~~~~~---------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~ 207 (285)
T cd05605 149 AVEIPE---------GETIRGRVGTVGYMAPEVVK------------NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK 207 (285)
T ss_pred ceecCC---------CCccccccCCCCccCcHHhc------------CCCCCccccchhHHHHHHHHHHCCCCCCCCchh
Confidence 875421 11112346899999996553 567888999999999999999999999743211
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
....+.... +.... ...+...+..+.+++.+||..||++|| ++.++++
T Consensus 208 -~~~~~~~~~---------~~~~~---------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 208 -VKREEVERR---------VKEDQ---------EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred -hHHHHHHHH---------hhhcc---------cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 011111000 00000 001112345678999999999999999 7888854
No 145
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.5e-34 Score=321.35 Aligned_cols=271 Identities=20% Similarity=0.310 Sum_probs=196.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|...++||+|+||.||+|+.+.+++.||+|+++... ......+.+|++++++++||||+++++++. .++..+
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 80 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVH-----TDKSLT 80 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEe-----eCCeEE
Confidence 46889999999999999999999899999999987432 223356788999999999999999999854 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++ +|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 81 lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 151 (309)
T cd07872 81 LVFEYLDK-DLKQYMDDCGN-----IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (309)
T ss_pred EEEeCCCC-CHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccc
Confidence 99999964 89888876532 367888999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... .......+|+.|+|||.+.. ...++.++||||+||++|||+||+.||......
T Consensus 152 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~- 211 (309)
T cd07872 152 RAKSVPT--------KTYSNEVVTLWYRPPDVLLG-----------SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE- 211 (309)
T ss_pred eecCCCc--------cccccccccccccCCHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 7542111 11123457899999976542 245788999999999999999999999743211
Q ss_pred ccHHHHHHhh--cchhhhhhcCcc-cc-----cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA--LPEKVMETVDPS-LL-----LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~--~~~~~~~~~d~~-~~-----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... .....+..+... .. ..+..............+..+++.+|++.||++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 212 DELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred HHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 1111111110 000111001000 00 000000000111123456789999999999999999999986
No 146
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.2e-34 Score=319.57 Aligned_cols=267 Identities=25% Similarity=0.412 Sum_probs=203.0
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCC-----CcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeec
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGEN-----GTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSS 747 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 747 (997)
....++|+..+.||+|+||.||+|..... ...+|+|++... .......+.+|+++++++ +|+||+++++++.
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~- 86 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCT- 86 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEc-
Confidence 34456789999999999999999988633 368999998743 334456788999999999 7999999999854
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
..+..+++|||+++|+|.++++..... .....+++..+++++.|++.|++|||+. +|+|||||
T Consensus 87 ----~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlk 159 (293)
T cd05053 87 ----QEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLA 159 (293)
T ss_pred ----CCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---Cccccccc
Confidence 345789999999999999999764310 1123588999999999999999999998 99999999
Q ss_pred CCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 818 ~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
|+||+++.++.+|++|||.++....... ........++..|+|||.+ .+..++.++||||||
T Consensus 160 p~Nil~~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG 221 (293)
T cd05053 160 ARNVLVTEDHVMKIADFGLARDIHHIDY------YRKTTNGRLPVKWMAPEAL------------FDRVYTHQSDVWSFG 221 (293)
T ss_pred eeeEEEcCCCeEEeCccccccccccccc------eeccCCCCCCccccCHHHh------------ccCCcCcccceeehh
Confidence 9999999999999999999986532211 0111122356789999654 356788999999999
Q ss_pred HHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 898 VMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 898 vvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
|++||+++ |..||.... ..+...... ....+ ..+..++..+.+++.+||..+|++||
T Consensus 222 ~il~el~~~g~~p~~~~~-----~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp 279 (293)
T cd05053 222 VLLWEIFTLGGSPYPGIP-----VEELFKLLK-----EGYRM------------EKPQNCTQELYHLMRDCWHEVPSQRP 279 (293)
T ss_pred hHHHHHhcCCCCCCCCCC-----HHHHHHHHH-----cCCcC------------CCCCCCCHHHHHHHHHHcccCcccCc
Confidence 99999998 889876321 111111110 00000 01112355788999999999999999
Q ss_pred CHHHHHHHHHHHH
Q 001908 977 EMRDVLAKLCAAR 989 (997)
Q Consensus 977 s~~evl~~L~~~~ 989 (997)
|+.|+++.|+++.
T Consensus 280 s~~eil~~l~~~~ 292 (293)
T cd05053 280 TFKQLVEDLDRML 292 (293)
T ss_pred CHHHHHHHHHHhh
Confidence 9999999999864
No 147
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.1e-34 Score=313.21 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=194.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||+||+|++. ++..||+|.++... ...+.+.+|++++++++||||+++++++.. .+..++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~l 76 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTK-----QRPIYI 76 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEcc-----CCCcEE
Confidence 57888999999999999999886 45569999887432 234678999999999999999999998643 446899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.+++..... .+++..++.++.||+.|++|||+. +++|+||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~l~~~i~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~ 148 (256)
T cd05113 77 VTEYMSNGCLLNYLREHGK-----RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccce
Confidence 9999999999999976432 478999999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
....... .......++..|+|||.+ .+..++.++|||||||++|||++ |..||.....
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~pe~~------------~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-- 207 (256)
T cd05113 149 YVLDDEY-------TSSVGSKFPVRWSPPEVL------------LYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-- 207 (256)
T ss_pred ecCCCce-------eecCCCccChhhCCHHHH------------hcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--
Confidence 6532111 111223456789999655 34668889999999999999999 9999863211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
.+........ ..+.. +......+.+++.+||+.+|++||++.++++.+
T Consensus 208 ---~~~~~~~~~~-----~~~~~------------~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 208 ---SETVEKVSQG-----LRLYR------------PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred ---HHHHHHHhcC-----CCCCC------------CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 1111111000 00000 011245778999999999999999999999876
No 148
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=3.3e-34 Score=313.14 Aligned_cols=248 Identities=23% Similarity=0.295 Sum_probs=189.5
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||.||+++.+.+|+.||+|++.... ....+.+..|++++++++||||+++.+++ ....+.++||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF-----ESKTHLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE-----ecCCeEEEEEecC
Confidence 699999999999999899999999986321 22334566799999999999999999884 4566899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 76 ~g~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~ 148 (277)
T cd05607 76 NGGDLKYHIYNVGE----RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDG 148 (277)
T ss_pred CCCCHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCC
Confidence 99999999876442 2378889999999999999999999 9999999999999999999999999998765211
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
.......|+..|+|||.+. +..++.++||||+||++|||++|+.||....... ...+.
T Consensus 149 ---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~ 206 (277)
T cd05607 149 ---------KTITQRAGTNGYMAPEILK------------EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEEL 206 (277)
T ss_pred ---------ceeeccCCCCCccCHHHHc------------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHH
Confidence 1122346899999996553 4668899999999999999999999987432111 11111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
..... ...... .......++.+++.+||+.||++||+++|+++.+
T Consensus 207 ~~~~~--------~~~~~~---------~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 207 KRRTL--------EDEVKF---------EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred HHHhh--------cccccc---------ccccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 11111 000000 0012245678999999999999999997766433
No 149
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=2.8e-34 Score=343.58 Aligned_cols=272 Identities=24% Similarity=0.313 Sum_probs=203.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.++||+|+||.||+|++..+++.||+|+++.. .+...+.+.+|++++++++||||+++++++. ..+.
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~-----d~~~ 76 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICS-----DGDP 76 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEe-----eCCE
Confidence 4789999999999999999999989999999998642 2234567899999999999999999999864 3558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCC-----CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQ-----PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~-----~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.++||||+++|+|.+++...... ......++..+++++.||++||+|||++ +|+||||||+||+++.++.+|
T Consensus 77 lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vK 153 (932)
T PRK13184 77 VYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVV 153 (932)
T ss_pred EEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEE
Confidence 99999999999999998753211 0112356778899999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCc----------cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHH
Q 001908 831 VSDFGLARFLFARPFDTS----------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~----------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl 900 (997)
|+|||+|+.......... ...........||+.|+|||.+ .+..++.++|||||||++
T Consensus 154 LiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l------------~g~~~S~kSDIWSLGVIL 221 (932)
T PRK13184 154 ILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERL------------LGVPASESTDIYALGVIL 221 (932)
T ss_pred EEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHh------------cCCCCCcHhHHHHHHHHH
Confidence 999999986521110000 0001112235699999999654 456789999999999999
Q ss_pred HHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-CHH
Q 001908 901 LEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-EMR 979 (997)
Q Consensus 901 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~ 979 (997)
|||+||+.||....... ... . . ...++.-. ....+.++.+.+++.+|++.||++|| +++
T Consensus 222 yELLTG~~PF~~~~~~k--i~~---~---~---~i~~P~~~---------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~e 281 (932)
T PRK13184 222 YQMLTLSFPYRRKKGRK--ISY---R---D---VILSPIEV---------APYREIPPFLSQIAMKALAVDPAERYSSVQ 281 (932)
T ss_pred HHHHHCCCCCCCcchhh--hhh---h---h---hccChhhc---------cccccCCHHHHHHHHHHccCChhhCcCHHH
Confidence 99999999997421110 000 0 0 00011000 00113456678999999999999996 677
Q ss_pred HHHHHHHHHHH
Q 001908 980 DVLAKLCAARQ 990 (997)
Q Consensus 980 evl~~L~~~~~ 990 (997)
++.+.|+...+
T Consensus 282 eLl~~Le~~lq 292 (932)
T PRK13184 282 ELKQDLEPHLQ 292 (932)
T ss_pred HHHHHHHHHHh
Confidence 77777877654
No 150
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=3.8e-34 Score=313.41 Aligned_cols=259 Identities=23% Similarity=0.376 Sum_probs=204.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|.+..++..||+|++........+.+.+|++++++++|+||+++++++. .....+
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYF-----YENKLW 78 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEe-----cCCeEE
Confidence 356889999999999999999998889999999998666666678999999999999999999999853 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++.+... .+++..+..++.|++.|+.|||++ +|+|+||||+||+++.++.+||+|||.+
T Consensus 79 lv~e~~~~~~L~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~ 150 (280)
T cd06611 79 ILIEFCDGGALDSIMLELER-----GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVS 150 (280)
T ss_pred EEeeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccc
Confidence 99999999999999976431 478899999999999999999999 9999999999999999999999999988
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........+++.|+|||.+.. +...+..++.++|||||||++|||++|+.||.....
T Consensus 151 ~~~~~~--------~~~~~~~~~~~~y~~PE~~~~-------~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-- 213 (280)
T cd06611 151 AKNKST--------LQKRDTFIGTPYWMAPEVVAC-------ETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-- 213 (280)
T ss_pred hhhccc--------ccccceeecchhhcCHHHHhh-------cccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH--
Confidence 754211 111223568899999987753 223345678899999999999999999999874311
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
........ ....+.. ..+..+...+.+++..||..+|++||++.++++.
T Consensus 214 --~~~~~~~~------~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 214 --MRVLLKIL------KSEPPTL----------DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred --HHHHHHHh------cCCCCCc----------CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 11110000 0000110 0111234567899999999999999999999764
No 151
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.7e-34 Score=329.07 Aligned_cols=268 Identities=22% Similarity=0.331 Sum_probs=201.8
Q ss_pred HHHhhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcC-CCCcceEEeeeec
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTR-HRNLIKIITVCSS 747 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~ 747 (997)
....++|.+.++||+|+||.||+|+++ ..++.||+|+++.. .....+.+.+|++++.++. ||||++++++|..
T Consensus 33 ~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~ 112 (401)
T cd05107 33 EMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTK 112 (401)
T ss_pred eecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc
Confidence 344567888999999999999999964 34568999999743 2333457889999999997 9999999999643
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCC-------------------------------------------------
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQ------------------------------------------------- 778 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------- 778 (997)
....++||||+++|+|.+++++....
T Consensus 113 -----~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (401)
T cd05107 113 -----GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA 187 (401)
T ss_pred -----CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence 45799999999999999999864310
Q ss_pred -------------------------------------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 779 -------------------------------------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 779 -------------------------------------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
.....+++..++.++.|++.|++|||+. +|+|||
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrd 264 (401)
T cd05107 188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRD 264 (401)
T ss_pred CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCccc
Confidence 0112467788899999999999999998 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHH
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwS 895 (997)
|||+||++++++.+|++|||+++....... ........++..|+|||.+. +..++.++||||
T Consensus 265 lkp~NiLl~~~~~~kL~DfGla~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dvws 326 (401)
T cd05107 265 LAARNVLICEGKLVKICDFGLARDIMRDSN------YISKGSTFLPLKWMAPESIF------------NNLYTTLSDVWS 326 (401)
T ss_pred CCcceEEEeCCCEEEEEecCcceecccccc------cccCCCcCCCCceeChHHhc------------CCCCCcHhHHHH
Confidence 999999999999999999999976422110 01112235678899996553 466889999999
Q ss_pred HHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 896 LGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 896 lGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
|||++|||++ |+.||....... ......... ..+ ..+..+..++.+++.+||..+|.+
T Consensus 327 lGvil~e~l~~g~~P~~~~~~~~----~~~~~~~~~-----~~~------------~~p~~~~~~l~~li~~cl~~~P~~ 385 (401)
T cd05107 327 FGILLWEIFTLGGTPYPELPMNE----QFYNAIKRG-----YRM------------AKPAHASDEIYEIMQKCWEEKFEI 385 (401)
T ss_pred HHHHHHHHHHcCCCCCCCCCchH----HHHHHHHcC-----CCC------------CCCCCCCHHHHHHHHHHcCCChhH
Confidence 9999999998 888986432111 110000000 000 001123457889999999999999
Q ss_pred CCCHHHHHHHHHHHH
Q 001908 975 RMEMRDVLAKLCAAR 989 (997)
Q Consensus 975 Rps~~evl~~L~~~~ 989 (997)
||+++|+++.|+++.
T Consensus 386 RPs~~ell~~L~~~~ 400 (401)
T cd05107 386 RPDFSQLVHLVGDLL 400 (401)
T ss_pred CcCHHHHHHHHHHHh
Confidence 999999999998864
No 152
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2e-34 Score=315.71 Aligned_cols=268 Identities=23% Similarity=0.388 Sum_probs=206.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECC----CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGE----NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
..++|++.+.||+|+||.||+|.+.. ++..||+|++... .......+.+|++++++++|+||+++++++..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~---- 79 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIE---- 79 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec----
Confidence 35688999999999999999999874 2678999988643 34456778999999999999999999998743
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCC--CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQ--PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.....++++||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +++||||||+||++++++.+
T Consensus 80 ~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~ 156 (280)
T cd05043 80 DGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQV 156 (280)
T ss_pred CCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcE
Confidence 345789999999999999999765321 1123588999999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRR 908 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~ 908 (997)
|++|||+++.+...... .......++..|+|||.+. +..++.++|||||||++||+++ |+.
T Consensus 157 kl~d~g~~~~~~~~~~~------~~~~~~~~~~~y~apE~~~------------~~~~~~~~Di~slG~~l~el~~~g~~ 218 (280)
T cd05043 157 KITDNALSRDLFPMDYH------CLGDNENRPVKWMALESLV------------NKEYSSASDVWSFGVLLWELMTLGQT 218 (280)
T ss_pred EECCCCCcccccCCceE------EeCCCCCcchhccCHHHHh------------cCCCCchhhHHHhHHHHHHHhcCCCC
Confidence 99999999865332211 0111234567899996553 4668899999999999999999 999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
||.... ...+..+.. ..... .....++.++.+++.+||..||++|||+.|+++.|+++
T Consensus 219 p~~~~~--~~~~~~~~~--------~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 219 PYVEID--PFEMAAYLK--------DGYRL------------AQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CcCcCC--HHHHHHHHH--------cCCCC------------CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 986421 111111100 00000 01112456788999999999999999999999999998
Q ss_pred HHH
Q 001908 989 RQT 991 (997)
Q Consensus 989 ~~~ 991 (997)
..+
T Consensus 277 ~~~ 279 (280)
T cd05043 277 HAQ 279 (280)
T ss_pred Hhc
Confidence 754
No 153
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-34 Score=312.57 Aligned_cols=258 Identities=27% Similarity=0.435 Sum_probs=198.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCC---cEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENG---TFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.+|++.+.||+|+||.||+|++..++ ..+|+|.++.. .....+.+.+|++++++++||||+++++++. ..+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 78 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVT-----KSK 78 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe-----cCC
Confidence 57888999999999999999886443 37999998643 2334568899999999999999999999853 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++..... .+++.+++.++.|++.|++|||+. +++||||||+||+++.++++|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~df 150 (267)
T cd05066 79 PVMIVTEYMENGSLDAFLRKHDG-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDF 150 (267)
T ss_pred ccEEEEEcCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCC
Confidence 78999999999999999986542 378899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.+........ .........++..|+|||.+ .+..++.++|||||||++||+++ |..||...
T Consensus 151 g~~~~~~~~~~-----~~~~~~~~~~~~~y~~pe~~------------~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~ 213 (267)
T cd05066 151 GLSRVLEDDPE-----AAYTTRGGKIPIRWTAPEAI------------AYRKFTSASDVWSYGIVMWEVMSYGERPYWEM 213 (267)
T ss_pred Ccccccccccc-----eeeecCCCccceeecCHhHh------------ccCccCchhhhHHHHHHHHHHhcCCCCCcccC
Confidence 99986532111 00111112335689999554 45678899999999999999887 99998643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.. .+...... +... .+.+..++..+.+++.+||+.+|.+||++.++++.|.++
T Consensus 214 ~~-----~~~~~~~~-----~~~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 214 SN-----QDVIKAIE-----EGYR------------LPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred CH-----HHHHHHHh-----CCCc------------CCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 21 11111110 0000 011112356778999999999999999999999999875
No 154
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.1e-34 Score=313.15 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=198.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||+|+...+++.||+|+++.........+.+|+.+++.++||||+++++++. ..+..++
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~-----~~~~~~l 83 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYL-----RRDKLWI 83 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEE-----eCCEEEE
Confidence 57888899999999999999998899999999997655555567889999999999999999999853 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++.... .+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|||.+.
T Consensus 84 v~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~ 154 (267)
T cd06645 84 CMEFCGGGSLQDIYHVTG------PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSA 154 (267)
T ss_pred EEeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeee
Confidence 999999999999997654 478899999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........|+..|+|||.+.. .....++.++||||+||++|||++|..||.......
T Consensus 155 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~- 216 (267)
T cd06645 155 QITAT--------IAKRKSFIGTPYWMAPEVAAV---------ERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR- 216 (267)
T ss_pred EccCc--------ccccccccCcccccChhhhcc---------ccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh-
Confidence 54211 111233568999999987632 113457889999999999999999999986332110
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... .. .. ...+.... ...++..+.+++.+|+..+|++||+++++++
T Consensus 217 ~~~~~---~~-~~---~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 217 ALFLM---TK-SN---FQPPKLKD----------KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred hHHhh---hc-cC---CCCCcccc----------cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 00000 00 00 00000000 0012345778999999999999999999875
No 155
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.9e-34 Score=322.10 Aligned_cols=242 Identities=23% Similarity=0.322 Sum_probs=189.4
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+...+++.||+|+++.. .....+.+..|.++++.+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF-----QTKDRLFFVM 75 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCeEEEEE
Confidence 4699999999999999989999999998743 233445677899998876 799999999984 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~ 146 (321)
T cd05591 76 EYVNGGDLMFQIQRSR------KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEG 146 (321)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceec
Confidence 9999999999997654 478889999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... ........||+.|+|||++. +..++.++||||+||++|||++|+.||.... .
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslG~il~el~tg~~Pf~~~~-----~ 201 (321)
T cd05591 147 ILN--------GVTTTTFCGTPDYIAPEILQ------------ELEYGPSVDWWALGVLMYEMMAGQPPFEADN-----E 201 (321)
T ss_pred ccC--------CccccccccCccccCHHHHc------------CCCCCCccceechhHHHHHHhcCCCCCCCCC-----H
Confidence 211 11223456899999997654 4678899999999999999999999997432 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-------CHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-------EMRDVLA 983 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-------s~~evl~ 983 (997)
.+......... ...| .....++.+++.+|+..||++|| +++++++
T Consensus 202 ~~~~~~i~~~~---~~~p---------------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 202 DDLFESILHDD---VLYP---------------VWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHHHHHcCC---CCCC---------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 11111111100 0000 11234677899999999999999 7777754
No 156
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=6.2e-34 Score=312.05 Aligned_cols=256 Identities=22% Similarity=0.336 Sum_probs=199.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.|++.+.||+|+||.||+|....++..+|+|.+........+.+.+|+++++.++|+|++++++++.. .+..++|
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~-----~~~~~~v 80 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYY-----ENNLWIL 80 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee-----CCEEEEE
Confidence 36788999999999999999998899999999976655666788999999999999999999998643 4589999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+||+++++|.+++.... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||++..
T Consensus 81 ~e~~~~~~l~~~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~ 152 (282)
T cd06643 81 IEFCAGGAVDAVMLELE-----RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAK 152 (282)
T ss_pred EEecCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccccccc
Confidence 99999999999887533 1478899999999999999999999 999999999999999999999999999875
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
.... ........++..|+|||.+.. ....+..++.++|||||||++|||++|++||.....
T Consensus 153 ~~~~--------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---- 213 (282)
T cd06643 153 NTRT--------IQRRDSFIGTPYWMAPEVVMC-------ETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP---- 213 (282)
T ss_pred cccc--------ccccccccccccccCHhhccc-------cCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH----
Confidence 4211 111223468899999987753 112245678899999999999999999999874311
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........ .. ..+.. ..+..++.++.+++.+||+.+|.+||++.++++
T Consensus 214 ~~~~~~~~-~~-----~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 214 MRVLLKIA-KS-----EPPTL----------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHh-hc-----CCCCC----------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111100 00 00000 011123456789999999999999999999875
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.8e-34 Score=309.98 Aligned_cols=251 Identities=24% Similarity=0.318 Sum_probs=199.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|++|.||+|+.+.+++.||+|.+... .....+.+.+|++++++++|||++++++++. ..+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFL-----DKGKLN 75 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeec-----cCCEEE
Confidence 477889999999999999999989999999998632 3445678899999999999999999999854 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ..+++..++.++.|++.|+.|||+. +|+|+||||+||+++.++.+|++|||++
T Consensus 76 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~ 148 (256)
T cd08529 76 IVMEYAENGDLHKLLKMQRG----RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVA 148 (256)
T ss_pred EEEEeCCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccc
Confidence 99999999999999987532 2478899999999999999999998 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........|++.|+|||.. .+..++.++|||||||++|||++|+.||....
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--- 205 (256)
T cd08529 149 KLLSDN--------TNFANTIVGTPYYLSPELC------------EDKPYNEKSDVWALGVVLYECCTGKHPFDANN--- 205 (256)
T ss_pred eeccCc--------cchhhccccCccccCHHHh------------cCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---
Confidence 765221 1112234678899999654 45668889999999999999999999987432
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..+........ ..+ ..+...+.++.+++.+||+.+|++||++.++++.
T Consensus 206 --~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 206 --QGALILKIIRG-----VFP------------PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred --HHHHHHHHHcC-----CCC------------CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 11111111000 000 0111345678899999999999999999999863
No 158
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-34 Score=317.67 Aligned_cols=268 Identities=22% Similarity=0.369 Sum_probs=201.8
Q ss_pred HHhhcCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
...++|++.++||+|+||.||+|..++ .+..||+|.+.... ......+.+|+.+++.++|+||+++++++.
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--- 79 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVS--- 79 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEc---
Confidence 346789999999999999999997642 34589999886432 233456788999999999999999999854
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCC----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQP----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH 825 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~ 825 (997)
..+..++||||+++|+|.+++....... .....++..+..++.|++.|++|||++ +|+||||||+||++++
T Consensus 80 --~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~ 154 (288)
T cd05061 80 --KGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAH 154 (288)
T ss_pred --CCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcC
Confidence 3457899999999999999998643211 123456778899999999999999999 9999999999999999
Q ss_pred CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 826 DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 826 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
++.+|++|||+++........ .......++..|+|||.+ .++.++.++|||||||++|||++
T Consensus 155 ~~~~~L~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~~pE~~------------~~~~~~~~~DvwslG~~l~el~~ 216 (288)
T cd05061 155 DFTVKIGDFGMTRDIYETDYY------RKGGKGLLPVRWMAPESL------------KDGVFTTSSDMWSFGVVLWEITS 216 (288)
T ss_pred CCcEEECcCCccccccccccc------cccCCCcccccccCHHHh------------ccCCCChHhHHHHHHHHHHHHHh
Confidence 999999999999865322211 111123456789999654 45678899999999999999999
Q ss_pred -CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 906 -RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 906 -g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|..||.... ..+...... +.... ..+..++..+.+++.+|++.+|++|||+.|+++.
T Consensus 217 ~~~~p~~~~~-----~~~~~~~~~--------~~~~~---------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 274 (288)
T cd05061 217 LAEQPYQGLS-----NEQVLKFVM--------DGGYL---------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNL 274 (288)
T ss_pred CCCCCCCCCC-----HHHHHHHHH--------cCCCC---------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 788886321 122211110 00000 0112235678999999999999999999999999
Q ss_pred HHHHHHH
Q 001908 985 LCAARQT 991 (997)
Q Consensus 985 L~~~~~~ 991 (997)
+++....
T Consensus 275 l~~~~~~ 281 (288)
T cd05061 275 LKDDLHP 281 (288)
T ss_pred HHhhcCC
Confidence 9876543
No 159
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=1.2e-34 Score=322.39 Aligned_cols=241 Identities=24% Similarity=0.363 Sum_probs=187.2
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|++..+++.||||+++... ......+..|..++... +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF-----QTKENLFFVM 75 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE-----EeCCEEEEEE
Confidence 46999999999999999899999999997431 23345667788888764 899999999985 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 ey~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05619 76 EYLNGGDLMFHIQSCH------KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKEN 146 (316)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceEC
Confidence 9999999999998653 478889999999999999999999 9999999999999999999999999998743
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||++. +..++.++||||+||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~ 201 (316)
T cd05619 147 ML--------GDAKTCTFCGTPDYIAPEILL------------GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHD-----E 201 (316)
T ss_pred CC--------CCCceeeecCCccccCHHHHc------------CCCCCchhhhhhHHHHHHHHHhCCCCCCCCC-----H
Confidence 11 111223456899999996653 5678899999999999999999999997431 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR-DVL 982 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 982 (997)
.+..... ....+.. +.....++.+++.+||..||++||++. ++.
T Consensus 202 ~~~~~~i------~~~~~~~------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 202 EELFQSI------RMDNPCY------------PRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHHHH------HhCCCCC------------CccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 1111111 0001110 011234567899999999999999997 553
No 160
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=5.4e-34 Score=309.90 Aligned_cols=262 Identities=23% Similarity=0.366 Sum_probs=203.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+|++.+.||+|+||.||+|+...+++.||||.+... .......+.+|+++++.++|+||+++++++. ..+.
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~ 76 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFI-----EDNE 76 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeE-----eCCe
Confidence 4688899999999999999999889999999987632 2334567889999999999999999999854 3558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+++|||+++++|.+++..... ....+++..++.++.|++.|++|||++ +++|+||||+||+++.++.++++|||
T Consensus 77 ~~~v~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 77 LNIVLELADAGDLSRMIKHFKK--QKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EEEEEEecCCCCHHHHHHHhhc--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 9999999999999999875331 122478999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+....... .......|+..|+|||.+. +..++.++||||||+++|||++|..||.....
T Consensus 152 ~~~~~~~~~--------~~~~~~~~~~~~~ape~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~ 211 (267)
T cd08229 152 LGRFFSSKT--------TAAHSLVGTPYYMSPERIH------------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 211 (267)
T ss_pred hhhccccCC--------cccccccCCcCccCHHHhc------------CCCccchhhHHHHHHHHHHHHhCCCCcccccc
Confidence 987652211 1112346888999996553 45678899999999999999999999863211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
+ ..+... .......+.. ........+.+++.+||..+|++|||+.+|++.++++.
T Consensus 212 ~---~~~~~~-----~~~~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 212 N---LYSLCK-----KIEQCDYPPL-----------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred h---HHHHhh-----hhhcCCCCCC-----------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 1 111111 1111111110 01124567889999999999999999999999998764
No 161
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=5.2e-34 Score=318.31 Aligned_cols=205 Identities=21% Similarity=0.319 Sum_probs=161.2
Q ss_pred CCcccccCcceEEEEEEC--CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 684 SNMIGQGSFGSVYKGILG--ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
.++||+|+||+||+|+.+ .+++.||+|+++... ....+.+|++++++++||||+++++++.. ......++|||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRKVWLLFD 80 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEec---CCCcEEEEEEe
Confidence 468999999999999975 366889999986432 23457789999999999999999998643 23457899999
Q ss_pred eccCCCHHHHhhcCCCC---CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee----CCCCcEEEccc
Q 001908 762 YMQNGSLEEWLHQSNGQ---PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 834 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DF 834 (997)
|++ ++|.+++...... .....++...++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07868 81 YAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred ccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeec
Confidence 994 5898887643211 1122478889999999999999999999 99999999999999 46689999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
|+|+...... ..........||+.|+|||++.. ...++.++||||+||++|||++|++||...
T Consensus 157 G~a~~~~~~~-----~~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 157 GFARLFNSPL-----KPLADLDPVVVTFWYRAPELLLG-----------ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred CceeccCCCC-----ccccccCCccccccccCCHHHcC-----------CCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9997652211 11112234578999999976542 245788999999999999999999999754
No 162
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-34 Score=323.00 Aligned_cols=242 Identities=24% Similarity=0.309 Sum_probs=190.6
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+++.+++.||+|+++.. .......+.+|+++++.+ +||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~-----~~~~~~~lv~ 75 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF-----QTKDRLFFVM 75 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE-----EcCCEEEEEE
Confidence 4699999999999999989999999999743 233456678899999887 799999999984 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~ 146 (318)
T cd05570 76 EYVNGGDLMFHIQRSG------RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEG 146 (318)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeec
Confidence 9999999999998754 478999999999999999999999 9999999999999999999999999998643
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||.+ .+..++.++|||||||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~g~~~y~aPE~~------------~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~-----~ 201 (318)
T cd05570 147 IL--------GGVTTSTFCGTPDYIAPEIL------------SYQPYGPAVDWWALGVLLYEMLAGQSPFEGDD-----E 201 (318)
T ss_pred Cc--------CCCcccceecCccccCHHHh------------cCCCCCcchhhhhHHHHHHHHhhCCCCCCCCC-----H
Confidence 11 11112335689999999655 35678899999999999999999999997331 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH-----HHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM-----RDVLA 983 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~-----~evl~ 983 (997)
.+........ ... .+...+..+.+++.+||..||++||++ .++++
T Consensus 202 ~~~~~~i~~~------~~~------------~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 202 DELFQSILED------EVR------------YPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHHHHHcC------CCC------------CCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1111111100 000 011224567899999999999999999 77754
No 163
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.7e-34 Score=319.83 Aligned_cols=242 Identities=22% Similarity=0.303 Sum_probs=187.8
Q ss_pred CcccccCcceEEEEEEC---CCCcEEEEEEeccc----chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 685 NMIGQGSFGSVYKGILG---ENGTFVAVKILNLM----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.||+|+||.||+++.. .+++.||+|+++.. .......+.+|++++++++||||+++++++ ..++..|
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~~~ 76 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF-----QTGGKLY 76 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE-----ecCCeEE
Confidence 67999999999999863 46889999998642 123345678899999999999999999884 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++.... .+.+..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 147 (323)
T cd05584 77 LILEYLSGGELFMHLEREG------IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLC 147 (323)
T ss_pred EEEeCCCCchHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCC
Confidence 9999999999999997654 367778888999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 148 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~G~~pf~~~~--- 204 (323)
T cd05584 148 KESIHE--------GTVTHTFCGTIEYMAPEILM------------RSGHGKAVDWWSLGALMYDMLTGAPPFTAEN--- 204 (323)
T ss_pred eecccC--------CCcccccCCCccccChhhcc------------CCCCCCcceecccHHHHHHHhcCCCCCCCCC---
Confidence 753211 11123356899999996553 4567889999999999999999999997421
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..+......... .. .+.....++.+++.+||+.||++|| ++.++++
T Consensus 205 --~~~~~~~~~~~~------~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 205 --RKKTIDKILKGK------LN------------LPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --HHHHHHHHHcCC------CC------------CCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 111111111100 00 0111234677999999999999999 7777765
No 164
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.3e-34 Score=309.68 Aligned_cols=250 Identities=27% Similarity=0.392 Sum_probs=193.6
Q ss_pred CcccccCcceEEEEEECCCC---cEEEEEEecccch-hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENG---TFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~---~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
++||+|+||.||+|++...+ ..||+|.+..... ...+.+.+|++++++++|+|++++++++. .+..++||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~~~~~~v~ 74 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK------GEPLMLVM 74 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc------CCceEEEE
Confidence 47999999999999876444 7899999874432 34567899999999999999999999853 23579999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~ 145 (257)
T cd05060 75 ELAPLGPLLKYLKKRR------EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRAL 145 (257)
T ss_pred EeCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccccccee
Confidence 9999999999998654 478899999999999999999999 9999999999999999999999999999865
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCcc
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLT 919 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~ 919 (997)
..... .........++..|+|||.+ .+..++.++|||||||++|||++ |..||.... ...
T Consensus 146 ~~~~~-----~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~ 206 (257)
T cd05060 146 GAGSD-----YYRATTAGRWPLKWYAPECI------------NYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAE 206 (257)
T ss_pred ecCCc-----ccccccCccccccccCHHHh------------cCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHH
Confidence 22110 11111122345689999644 45678899999999999999998 999986431 111
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
+....... .. .+.+..++..+.+++.+||..+|++||++.++.+.|+++
T Consensus 207 ~~~~~~~~---~~-----------------~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 207 VIAMLESG---ER-----------------LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HHHHHHcC---Cc-----------------CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 11111110 00 011122356788999999999999999999999999875
No 165
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=2.1e-34 Score=329.13 Aligned_cols=260 Identities=21% Similarity=0.269 Sum_probs=193.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.++||+|+||+||+|+...+++.||||++... .....+.+.+|++++++++||||+++++++ .+..+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~-----~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF-----QDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCe
Confidence 4788999999999999999999999999999998632 233456788999999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 76 LYLIMEFLPGGDLMTMLIKYD------TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999998654 477888899999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCC--------cccc-------------------------------ccccccccccccccCCcchhccccc
Q 001908 836 LARFLFARPFDT--------SMET-------------------------------QSSSIGIKGTVGYVPPGNIAKMLNL 876 (997)
Q Consensus 836 ~a~~~~~~~~~~--------~~~~-------------------------------~~~~~~~~gt~~y~aPE~l~~~~~~ 876 (997)
+|+......... .... ........||+.|+|||++.
T Consensus 147 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----- 221 (377)
T cd05629 147 LSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL----- 221 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc-----
Confidence 996432110000 0000 00001246999999996653
Q ss_pred CccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHH
Q 001908 877 PCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEEC 956 (997)
Q Consensus 877 ~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 956 (997)
+..++.++|||||||++|||++|+.||..... .+........ ...+ .+. .....
T Consensus 222 -------~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~------~~~~--~~p------~~~~~ 275 (377)
T cd05629 222 -------QQGYGQECDWWSLGAIMFECLIGWPPFCSENS-----HETYRKIINW------RETL--YFP------DDIHL 275 (377)
T ss_pred -------cCCCCCceeeEecchhhhhhhcCCCCCCCCCH-----HHHHHHHHcc------CCcc--CCC------CCCCC
Confidence 56788999999999999999999999964311 1111111000 0000 000 00012
Q ss_pred HHHHHHHHhhcCCCCCCCC---CCHHHHHHH
Q 001908 957 LVTVIRIGVACSMESPIER---MEMRDVLAK 984 (997)
Q Consensus 957 ~~~l~~li~~cl~~dP~~R---ps~~evl~~ 984 (997)
..++.+++.+|+. +|.+| +++.|+++.
T Consensus 276 s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 276 SVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 3456789999997 66665 599988764
No 166
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.5e-34 Score=314.30 Aligned_cols=262 Identities=24% Similarity=0.386 Sum_probs=199.9
Q ss_pred HhhcCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
..++|++.+.||+|+||.||+|.+.. .+..||+|.+.... ......+.+|+.++++++|+||+++++++.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~---- 79 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSF---- 79 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEc----
Confidence 45789999999999999999999976 67889999886433 334567899999999999999999999854
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCC-CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC--
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQ-PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-- 827 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-- 827 (997)
..+..++||||+++++|.+++...... .....+++..+++++.||+.|++|||++ +++||||||+||+++.++
T Consensus 80 -~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~ 155 (277)
T cd05036 80 -ERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPG 155 (277)
T ss_pred -cCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCC
Confidence 345679999999999999999875421 1223588999999999999999999999 999999999999998765
Q ss_pred -cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-
Q 001908 828 -VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT- 905 (997)
Q Consensus 828 -~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt- 905 (997)
.+|++|||+++....... .........+..|+|||.+. +..++.++|||||||++|||++
T Consensus 156 ~~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~~ 217 (277)
T cd05036 156 RVAKIADFGMARDIYRASY------YRKGGRAMLPIKWMPPEAFL------------DGIFTSKTDVWSFGVLLWEIFSL 217 (277)
T ss_pred cceEeccCccccccCCccc------eecCCCCCccHhhCCHHHHh------------cCCcCchhHHHHHHHHHHHHHcC
Confidence 699999999986522111 00111223356899996553 5678999999999999999997
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
|..||..... .+......... .+ ..+..++..+.+++.+||+.+|++||++.++++.|
T Consensus 218 g~~pf~~~~~-----~~~~~~~~~~~-----~~------------~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l 275 (277)
T cd05036 218 GYMPYPGRTN-----QEVMEFVTGGG-----RL------------DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275 (277)
T ss_pred CCCCCCCCCH-----HHHHHHHHcCC-----cC------------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence 9999874321 11111110000 00 00122356788999999999999999999999987
Q ss_pred H
Q 001908 986 C 986 (997)
Q Consensus 986 ~ 986 (997)
.
T Consensus 276 ~ 276 (277)
T cd05036 276 Q 276 (277)
T ss_pred h
Confidence 5
No 167
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.2e-34 Score=325.32 Aligned_cols=258 Identities=22% Similarity=0.267 Sum_probs=198.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+.+.+++.||+|+++... ....+.+.+|+++++.++|+||+++++++ ...+.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~-----~~~~~ 75 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF-----QDKDN 75 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCe
Confidence 46889999999999999999999999999999997432 23456788999999999999999999884 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~~~~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 76 LYLVMEYQPGGDLLSLLNRYED-----QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred EEEEECCCCCCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 9999999999999999987531 478889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|....... ........||+.|+|||.+..... .....++.++|||||||++|||++|+.||....
T Consensus 148 ~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~- 213 (330)
T cd05601 148 SAARLTANK-------MVNSKLPVGTPDYIAPEVLTTMNG------DGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGT- 213 (330)
T ss_pred CCeECCCCC-------ceeeecccCCccccCHHHhccccc------cccCCCCCcceeecccceeeeeccCCCCCCCCC-
Confidence 997652211 112233468999999988753211 114567889999999999999999999987431
Q ss_pred CCccHHHHHHhhcch-hhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPE-KVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+........ .... + +.......++.+++..|+. +|++||++.++++
T Consensus 214 ----~~~~~~~i~~~~~~~~---------~------~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 214 ----SAKTYNNIMNFQRFLK---------F------PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred ----HHHHHHHHHcCCCccC---------C------CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11111111000 0000 0 0001123457789999997 9999999999874
No 168
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.6e-34 Score=310.44 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=191.1
Q ss_pred cccccCcceEEEEEE--CCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 686 MIGQGSFGSVYKGIL--GENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~--~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+||+|+||.||+|.+ ..+++.||+|+++... ....+.+.+|+.+++.++|+||+++++++. .+..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------~~~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE------AESWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc------CCCcEEEEe
Confidence 689999999999975 3567899999986432 334578899999999999999999999853 235789999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.++...
T Consensus 76 ~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~ 146 (257)
T cd05116 76 LAELGPLNKFLQKNK------HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALG 146 (257)
T ss_pred cCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccC
Confidence 999999999997643 478889999999999999999999 99999999999999999999999999997652
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
.... .........++..|+|||.+. ...++.++|||||||++|||++ |..||..... ...
T Consensus 147 ~~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~ 207 (257)
T cd05116 147 ADEN-----YYKAKTHGKWPVKWYAPECMN------------YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEV 207 (257)
T ss_pred CCCC-----eeeecCCCCCCccccCHhHhc------------cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHH
Confidence 2111 001112223467899996553 4568889999999999999998 9999874311 111
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.+.... .. .+ +.+..++.++.+++.+||+.||++||++++|.+.|++
T Consensus 208 ~~~i~~---~~-----~~------------~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 208 TQMIES---GE-----RM------------ECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHC---CC-----CC------------CCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 111110 00 00 0111235678899999999999999999999999875
No 169
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.7e-34 Score=316.78 Aligned_cols=260 Identities=24% Similarity=0.367 Sum_probs=197.7
Q ss_pred hcCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccch-hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.+|.+.++||+|+||.||+|.... .++.||+|+++.... ...+.+.+|+++++.++||||+++++++. .
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~ 79 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVT-----K 79 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----C
Confidence 357788999999999999998753 357899999974433 33467889999999999999999999854 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
.+..++++||+++++|.+++...... .....+++..+++++.|++.|++|+|+. +|+||||||+||+
T Consensus 80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil 156 (283)
T cd05091 80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVL 156 (283)
T ss_pred CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheE
Confidence 45789999999999999998643210 1122478888999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+++++.+||+|||+++....... ........+++.|+|||.+ .++.++.++|||||||++||
T Consensus 157 ~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~~l~e 218 (283)
T cd05091 157 VFDKLNVKISDLGLFREVYAADY------YKLMGNSLLPIRWMSPEAI------------MYGKFSIDSDIWSYGVVLWE 218 (283)
T ss_pred ecCCCceEecccccccccccchh------eeeccCccCCccccCHHHH------------hcCCCCcchhHHHHHHHHHH
Confidence 99999999999999876522111 1111223457889999655 34668889999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|++ |..||.... ..+.......... .+.+..++..+.+++..||+.+|++||+++++
T Consensus 219 l~~~g~~p~~~~~-----~~~~~~~i~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i 276 (283)
T cd05091 219 VFSYGLQPYCGYS-----NQDVIEMIRNRQV-----------------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDI 276 (283)
T ss_pred HHcCCCCCCCCCC-----HHHHHHHHHcCCc-----------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHH
Confidence 998 888876321 1122111111000 01122356678899999999999999999999
Q ss_pred HHHHH
Q 001908 982 LAKLC 986 (997)
Q Consensus 982 l~~L~ 986 (997)
++.|+
T Consensus 277 ~~~l~ 281 (283)
T cd05091 277 HSRLR 281 (283)
T ss_pred HHHhh
Confidence 99886
No 170
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.7e-34 Score=315.69 Aligned_cols=261 Identities=23% Similarity=0.388 Sum_probs=200.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCC-----CcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGEN-----GTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||.||+|..+.. +..||+|.+.... ......+.+|+++++.++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~----- 79 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVS----- 79 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEc-----
Confidence 46788999999999999999988643 3789999986432 334567889999999999999999999854
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCC----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQP----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
.....++||||+++|+|.+++....... ....+++..++.++.|++.|+.|||+. +|+||||||+||+++.++
T Consensus 80 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~ 156 (277)
T cd05032 80 TGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDL 156 (277)
T ss_pred CCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCC
Confidence 4468999999999999999997654211 122468889999999999999999999 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-C
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-R 906 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g 906 (997)
.+||+|||.++....... ........++..|+|||.+. ++.++.++|||||||++||++| |
T Consensus 157 ~~kl~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~t~g 218 (277)
T cd05032 157 TVKIGDFGMTRDIYETDY------YRKGGKGLLPVRWMAPESLK------------DGVFTTKSDVWSFGVVLWEMATLA 218 (277)
T ss_pred CEEECCcccchhhccCcc------cccCCCCCccccccCHHHHh------------cCCCCcccchHHHHHHHHHhhccC
Confidence 999999999986532211 11122334678899996553 4668889999999999999998 8
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..||.... ..+...... +.. ....+..++.++.+++.+||..+|++|||+.++++.|+
T Consensus 219 ~~p~~~~~-----~~~~~~~~~--------~~~---------~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 219 EQPYQGLS-----NEEVLKFVI--------DGG---------HLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCccCC-----HHHHHHHHh--------cCC---------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 99986321 111111110 000 00111223567889999999999999999999999876
No 171
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.6e-34 Score=315.38 Aligned_cols=271 Identities=24% Similarity=0.398 Sum_probs=200.7
Q ss_pred hcCccCCcccccCcceEEEEEE----CCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+.|++.+.||+|+||.||.|+. ..++..||+|.++... ......+.+|++++++++|+|++++.+++... +.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~ 80 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---GG 80 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC---CC
Confidence 4578899999999999999985 3467899999987443 33456789999999999999999999987532 24
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++++|.+++.+... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~d 152 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGD 152 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECC
Confidence 568999999999999999976431 378899999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.++....... .........++..|+|||.+ .+..++.++|||||||++|||+|++.|+...
T Consensus 153 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~apE~~------------~~~~~~~~~Di~slG~il~ellt~~~~~~~~ 215 (284)
T cd05079 153 FGLTKAIETDKE-----YYTVKDDLDSPVFWYAPECL------------IQSKFYIASDVWSFGVTLYELLTYCDSESSP 215 (284)
T ss_pred CccccccccCcc-----ceeecCCCCCCccccCHHHh------------ccCCCCccccchhhhhhhhhhhcCCCCCccc
Confidence 999986532111 01111234567789999654 3567888999999999999999988775422
Q ss_pred cCCCccHHHHHHh----hcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKM----ALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~----~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
... ..+.... ........... .+...+.+..++.++.+++.+||+.+|++||+++|+++.++++
T Consensus 216 ~~~---~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 216 MTL---FLKMIGPTHGQMTVTRLVRVLE--------EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cch---hhhhcccccccccHHHHHHHHH--------cCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 110 0000000 00000000000 0000111123456789999999999999999999999999875
No 172
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=3.7e-34 Score=310.19 Aligned_cols=255 Identities=29% Similarity=0.439 Sum_probs=197.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|++..+ ..||+|+++.... ..+.+.+|++++++++|+||+++++++. .+..+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVS------EEPIY 76 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEEC------CCCcE
Confidence 35689999999999999999998744 5699999874332 2357889999999999999999998742 24579
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++.+... ..+++..+..++.|+++||+|+|+. +++||||||+||++++++.+||+|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~ 149 (262)
T cd05071 77 IVTEYMSKGSLLDFLKGEMG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLA 149 (262)
T ss_pred EEEEcCCCCcHHHHHhhccc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCce
Confidence 99999999999999986431 2478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+...... ........++..|+|||.. .+..++.++|||||||++|||+| |..||.....
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~- 209 (262)
T cd05071 150 RLIEDNE-------YTARQGAKFPIKWTAPEAA------------LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN- 209 (262)
T ss_pred eeccccc-------cccccCCcccceecCHhHh------------ccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCh-
Confidence 7652211 1111223467789999644 35678999999999999999999 8888864321
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.+...... ... ..+...+++..+.+++.+|++.+|++||++.++++.|++.
T Consensus 210 ----~~~~~~~~-----~~~------------~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 210 ----REVLDQVE-----RGY------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred ----HHHHHHHh-----cCC------------CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 11111000 000 0011223466788999999999999999999999998864
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.3e-34 Score=316.26 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=198.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|+..+.||+|+||.||+|+...+++.||+|.+........+.+.+|+++++.++|+|++++++++. .....++
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~-----~~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCEEEE
Confidence 47888999999999999999998899999999997655555577889999999999999999999854 3458999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++.... +++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 95 v~e~~~~~~L~~~~~~~~-------~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~ 164 (296)
T cd06654 95 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 164 (296)
T ss_pred eecccCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccch
Confidence 999999999999997542 67889999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......|++.|+|||.+. +..++.++|||||||++|+|++|+.||.....
T Consensus 165 ~~~~~~--------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~--- 221 (296)
T cd06654 165 QITPEQ--------SKRSTMVGTPYWMAPEVVT------------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP--- 221 (296)
T ss_pred hccccc--------cccCcccCCccccCHHHHc------------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 642211 1122346889999996553 46678899999999999999999999964321
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
........ ... .+.. ..+......+.+++.+||..+|++||++.|+++.
T Consensus 222 -~~~~~~~~-~~~-----~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 222 -LRALYLIA-TNG-----TPEL----------QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred -HHhHHHHh-cCC-----CCCC----------CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 11111000 000 0000 0112234567899999999999999999999873
No 174
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.3e-34 Score=322.29 Aligned_cols=241 Identities=22% Similarity=0.319 Sum_probs=187.0
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+++.+++.||+|+++... ......+..|..++... +||||+++++++ ...++.++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF-----QTKEHLFFVM 75 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE-----EeCCEEEEEE
Confidence 46999999999999999999999999997432 23345667788888764 899999999984 4566899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~ 146 (316)
T cd05620 76 EFLNGGDLMFHIQDKG------RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKEN 146 (316)
T ss_pred CCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeec
Confidence 9999999999997654 378889999999999999999999 9999999999999999999999999998643
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||++. +..++.++||||+||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslGvil~el~~g~~Pf~~~~-----~ 201 (316)
T cd05620 147 VF--------GDNRASTFCGTPDYIAPEILQ------------GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDD-----E 201 (316)
T ss_pred cc--------CCCceeccCCCcCccCHHHHc------------CCCCCcccchhhhHHHHHHHHhCCCCCCCCC-----H
Confidence 11 111223457899999996653 5678899999999999999999999997321 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR-DVL 982 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 982 (997)
.+...... ...+... .....++.+++.+||+.||++||++. ++.
T Consensus 202 ~~~~~~~~------~~~~~~~------------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 202 DELFESIR------VDTPHYP------------RWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHHHHH------hCCCCCC------------CCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11111110 0011110 01234567899999999999999985 444
No 175
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.2e-34 Score=312.04 Aligned_cols=260 Identities=27% Similarity=0.455 Sum_probs=199.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc---EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.+|++.+.||+|+||.||+|+.+.+++ .||+|+++.. .......+..|++++++++||||+++.+++ ....
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~ 78 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV-----TKSR 78 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE-----CCCC
Confidence 457889999999999999999876554 6999998743 344567899999999999999999999984 4456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++....+ .+++.+++.++.|++.|++|||++ +++||||||+||+++.++.+|++||
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~df 150 (269)
T cd05065 79 PVMIITEFMENGALDSFLRQNDG-----QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDF 150 (269)
T ss_pred ceEEEEecCCCCcHHHHHhhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCC
Confidence 78999999999999999986542 378899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.+........... .........+..|+|||.+ .+..++.++|||||||++||+++ |..||...
T Consensus 151 g~~~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~ 215 (269)
T cd05065 151 GLSRFLEDDTSDPT---YTSSLGGKIPIRWTAPEAI------------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 215 (269)
T ss_pred ccccccccCccccc---cccccCCCcceeecCHhHh------------ccCcccchhhhhhhHHHHHHHhcCCCCCCCCC
Confidence 99876532211110 0001111124579999654 45678899999999999999887 99998643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
. ..+...... ... ..+.+.+++..+.+++.+||..+|++||++.++++.|+++
T Consensus 216 ~-----~~~~~~~i~-----~~~------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 216 S-----NQDVINAIE-----QDY------------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred C-----HHHHHHHHH-----cCC------------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 1 111111110 000 0111223456788999999999999999999999998764
No 176
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=2.1e-34 Score=323.52 Aligned_cols=253 Identities=22% Similarity=0.313 Sum_probs=193.3
Q ss_pred cCccCCcccccCcceEEEEEEC---CCCcEEEEEEeccc----chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLM----QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 751 (997)
+|++.+.||+|+||+||+++.. .+++.||+|++... .....+.+.+|+++++++ +|++|++++++ +.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~-----~~ 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYA-----FQ 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEE-----Ee
Confidence 4788999999999999998863 47889999998632 223345678899999999 59999999988 44
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
..+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||
T Consensus 76 ~~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl 146 (332)
T cd05614 76 TEAKLHLILDYVSGGEMFTHLYQRD------NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVL 146 (332)
T ss_pred cCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEE
Confidence 5668999999999999999997654 478889999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+++...... ........||+.|+|||++.. ...++.++|||||||++|||+||+.||.
T Consensus 147 ~DfG~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~elltg~~pf~ 208 (332)
T cd05614 147 TDFGLSKEFLSEE-------KERTYSFCGTIEYMAPEIIRG-----------KGGHGKAVDWWSLGILIFELLTGASPFT 208 (332)
T ss_pred eeCcCCccccccC-------CCccccccCCccccCHHHhcC-----------CCCCCCccccccchhhhhhhhcCCCCCC
Confidence 9999997642211 112234579999999977642 1346789999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..... ........... ..++.. +......+.+++.+||+.||++|| +++|+++
T Consensus 209 ~~~~~-~~~~~~~~~~~------~~~~~~------------~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 209 LEGER-NTQSEVSRRIL------KCDPPF------------PSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCC-CCHHHHHHHHh------cCCCCC------------CCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 43221 11112111110 011111 111244677899999999999999 6777764
No 177
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=8.8e-34 Score=314.80 Aligned_cols=269 Identities=21% Similarity=0.295 Sum_probs=199.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.++||+|+||.||++++..++..+|+|.++.. .......+.+|++++++++||||+++++++. .++..+
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 75 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFY-----SDGEIS 75 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCCEEE
Confidence 3688999999999999999999989999999998743 3334567889999999999999999999854 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++++.. .+++..+..++.|+++||+|||+++ +++||||||+||+++.++.+||+|||.+
T Consensus 76 lv~ey~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 147 (308)
T cd06615 76 ICMEHMDGGSLDQVLKKAG------RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 147 (308)
T ss_pred EEeeccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCCCc
Confidence 9999999999999998754 4788889999999999999999742 8999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ......|+..|+|||.+ .+..++.++|||||||++|||++|+.||.....
T Consensus 148 ~~~~~~----------~~~~~~~~~~~~aPE~~------------~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~-- 203 (308)
T cd06615 148 GQLIDS----------MANSFVGTRSYMSPERL------------QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA-- 203 (308)
T ss_pred cccccc----------ccccCCCCcCccChhHh------------cCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--
Confidence 654211 11235688999999654 355678899999999999999999999863321
Q ss_pred ccHHHHHHhhcchhhhhhcC--cccccccc---------------cchhhhh-HHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 918 LTLHEFCKMALPEKVMETVD--PSLLLAWS---------------DGRRRAK-VEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d--~~~~~~~~---------------~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
........... ........ ........ ....... ......++.+++.+||..+|++||++.
T Consensus 204 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~ 282 (308)
T cd06615 204 KELEAMFGRPV-SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLK 282 (308)
T ss_pred hhHHHhhcCcc-ccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHH
Confidence 11111111000 00000000 00000000 0000000 011345688999999999999999999
Q ss_pred HHHHHH
Q 001908 980 DVLAKL 985 (997)
Q Consensus 980 evl~~L 985 (997)
|+++.-
T Consensus 283 ~ll~~~ 288 (308)
T cd06615 283 ELTKHP 288 (308)
T ss_pred HHhcCh
Confidence 998763
No 178
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.3e-34 Score=319.57 Aligned_cols=207 Identities=29% Similarity=0.367 Sum_probs=171.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+++...+++.||+|++... .....+.+.+|+.+++.++|+||+++++++ ...++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF-----QDENN 75 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE-----ecCCe
Confidence 4789999999999999999999989999999998632 223446688899999999999999999984 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred EEEEEecCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 9999999999999999976431 378889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
++....... ........||+.|+|||++..... ....++.++||||+||++|||++|+.||..
T Consensus 148 ~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~-------~~~~~~~~~DiwslG~~l~el~~g~~Pf~~ 210 (331)
T cd05597 148 SCLRLLADG-------TVQSNVAVGTPDYISPEILQAMED-------GKGRYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeecCCCC-------CccccceeccccccCHHHHhhccc-------cccCCCCcceeehhhhHHHHHhhCCCCCCC
Confidence 987542211 111223468999999988763210 124578899999999999999999999874
No 179
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-33 Score=306.65 Aligned_cols=254 Identities=23% Similarity=0.360 Sum_probs=198.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+.|+..+.||+|++|.||+|....++++||+|++.... ....+.+.+|++++++++||||+++++++ ...
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCL-----RDD 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ccC
Confidence 46889999999999999999998899999999986322 22346788999999999999999999995 445
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++|+||+++++|.+++.... .++...+.+++.|++.|+.|||+. +|+||||||+||++++++.+||+|
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~d 147 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAYG------ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGD 147 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEee
Confidence 68999999999999999998654 367888899999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.++...... ..........|+..|+|||.+. +..++.++||||+||++|||++|+.||...
T Consensus 148 fg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~g~~p~~~~ 210 (263)
T cd06625 148 FGASKRLQTIC-----SSGTGMKSVTGTPYWMSPEVIS------------GEGYGRKADVWSVGCTVVEMLTEKPPWAEF 210 (263)
T ss_pred cccceeccccc-----cccccccCCCcCccccCcceec------------cCCCCchhhhHHHHHHHHHHHhCCCCcccc
Confidence 99987652211 0111112345788999996654 456889999999999999999999998642
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
. ........... ...+ ..+..+...+.+++..||..+|++|||+.|+++.
T Consensus 211 ~----~~~~~~~~~~~-----~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 211 E----AMAAIFKIATQ-----PTNP------------QLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred c----hHHHHHHHhcc-----CCCC------------CCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 1 11111110000 0000 1112335567899999999999999999999864
No 180
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=3e-34 Score=328.47 Aligned_cols=207 Identities=21% Similarity=0.326 Sum_probs=170.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.|+..++||+|+||+||+|+...+++.||+|++.... ......+.+|++++++++|+||+++++++ .+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~-----~~~~~~ 76 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF-----QDKDNL 76 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE-----EeCCEE
Confidence 5888999999999999999999999999999986432 33456788999999999999999999985 445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++.+.. .++...+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 77 ~lv~E~~~gg~L~~~l~~~~------~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGl 147 (382)
T cd05625 77 YFVMDYIPGGDMMSLLIRMG------IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 147 (382)
T ss_pred EEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCC
Confidence 99999999999999997654 367788899999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCC----Cc-----------------------------------cccccccccccccccccCCcchhcccccC
Q 001908 837 ARFLFARPFD----TS-----------------------------------METQSSSIGIKGTVGYVPPGNIAKMLNLP 877 (997)
Q Consensus 837 a~~~~~~~~~----~~-----------------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~ 877 (997)
|+........ .. ...........||+.|+|||++.
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~------ 221 (382)
T cd05625 148 CTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL------ 221 (382)
T ss_pred CccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc------
Confidence 8543110000 00 00000112356999999996653
Q ss_pred ccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 878 CLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 878 ~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+..++.++||||+||++|||++|+.||..
T Consensus 222 ------~~~~~~~~DiwSlGvil~elltG~~Pf~~ 250 (382)
T cd05625 222 ------RTGYTQLCDWWSVGVILYEMLVGQPPFLA 250 (382)
T ss_pred ------CCCCCCeeeEEechHHHHHHHhCCCCCCC
Confidence 56788999999999999999999999974
No 181
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.6e-34 Score=323.02 Aligned_cols=242 Identities=22% Similarity=0.290 Sum_probs=188.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+|++.+.||+|+||+||+|+.+.+++.||+|+++... ....+.+..|..++... +|++|+++++++ ...+.
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~-----~~~~~ 75 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF-----QTMDR 75 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE-----ecCCE
Confidence 5788999999999999999999899999999987432 23345567788888777 588899998884 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 76 LYFVMEYVNGGDLMYQIQQVG------RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 999999999999999997654 378889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++..... ........||+.|+|||++. +..++.++|||||||++|||+||+.||....
T Consensus 147 ~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlGvil~elltg~~Pf~~~~- 205 (323)
T cd05616 147 MCKENMWD--------GVTTKTFCGTPDYIAPEIIA------------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGED- 205 (323)
T ss_pred CceecCCC--------CCccccCCCChhhcCHHHhc------------CCCCCCccchhchhHHHHHHHhCCCCCCCCC-
Confidence 98753111 11223457899999996553 5678999999999999999999999997431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
..+......... ... +.....++.+++.+|++.||++|++.
T Consensus 206 ----~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 206 ----EDELFQSIMEHN------VAY------------PKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred ----HHHHHHHHHhCC------CCC------------CCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 111111111000 000 11123456789999999999999985
No 182
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=5.4e-34 Score=308.95 Aligned_cols=256 Identities=24% Similarity=0.450 Sum_probs=191.6
Q ss_pred CcccccCcceEEEEEECC---CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGE---NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|.+.. .+..||+|++... .....+.+.+|+.+++.++||||++++++|.. .++..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLP----SEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeec----CCCCcEEEE
Confidence 468999999999998743 3457999998533 33456788899999999999999999998643 334678999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++..... ..++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++..
T Consensus 77 e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 77 PYMKHGDLRNFIRSETH-----NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDI 148 (262)
T ss_pred ecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccc
Confidence 99999999999986532 256778889999999999999999 9999999999999999999999999999765
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-CCCCCcCcCCCcc
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRPTNCMFQGGLT 919 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg-~~P~~~~~~~~~~ 919 (997)
...... .........++..|+|||.+ .+..++.++|||||||++|||++| .+||... .
T Consensus 149 ~~~~~~----~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~-----~ 207 (262)
T cd05058 149 YDKEYY----SVHNHTGAKLPVKWMALESL------------QTQKFTTKSDVWSFGVLLWELMTRGAPPYPDV-----D 207 (262)
T ss_pred cCCcce----eecccccCcCCccccChhHh------------ccCccchHHHHHHHHHHHHHHHcCCCCCCCCC-----C
Confidence 321110 01111223457789999654 346688999999999999999995 5555422 1
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
..+........ .. ...+..++..+.+++.+||..+|++||++.|+++.|+++..
T Consensus 208 ~~~~~~~~~~~-----~~------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 208 SFDITVYLLQG-----RR------------LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred HHHHHHHHhcC-----CC------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 11111111000 00 00111234578899999999999999999999999998753
No 183
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=1.3e-33 Score=311.10 Aligned_cols=257 Identities=22% Similarity=0.315 Sum_probs=200.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+.|++.++||+|+||.||+|+...+++.||+|++........+.+.+|+++++.++|+||+++++++. .+...++
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 86 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFY-----WDGKLWI 86 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEE-----eCCeEEE
Confidence 56889999999999999999999899999999998766666788899999999999999999999854 3458999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|..++.+... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 87 v~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~ 158 (292)
T cd06644 87 MIEFCPGGAVDAIMLELDR-----GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSA 158 (292)
T ss_pred EEecCCCCcHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccce
Confidence 9999999999988865431 378899999999999999999999 99999999999999999999999999886
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........++..|+|||.+.. +......++.++|||||||++|||++|+.||....
T Consensus 159 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~---- 219 (292)
T cd06644 159 KNVKT--------LQRRDSFIGTPYWMAPEVVMC-------ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN---- 219 (292)
T ss_pred ecccc--------ccccceecCCccccCceeecc-------ccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc----
Confidence 53211 111223467889999987642 11123557889999999999999999999986421
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+...... ....+.. ..+..+..++.+++.+||..+|++||++.|+++
T Consensus 220 -~~~~~~~~~-----~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 220 -PMRVLLKIA-----KSEPPTL----------SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred -HHHHHHHHh-----cCCCccC----------CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 111111100 0001110 011123456789999999999999999999975
No 184
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5e-34 Score=316.40 Aligned_cols=267 Identities=22% Similarity=0.378 Sum_probs=203.6
Q ss_pred HHhhcCccCCcccccCcceEEEEEEC-------CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeee
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILG-------ENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCS 746 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~ 746 (997)
....+|++.+.||+|+||.||+|+.. ..+..||+|+++.. .....+.+.+|+++++.+ +||||+++++++.
T Consensus 12 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~ 91 (304)
T cd05101 12 FSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT 91 (304)
T ss_pred ccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEe
Confidence 34568899999999999999999752 23457999998643 234457789999999999 8999999999854
Q ss_pred ccCcCCCceEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 001908 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816 (997)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 816 (997)
.....++||||+++|+|.+++....... ....+++.++++++.||++|+.|||++ +|+||||
T Consensus 92 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dl 163 (304)
T cd05101 92 -----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDL 163 (304)
T ss_pred -----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---Ceeeccc
Confidence 3457899999999999999998753211 123478889999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 817 KPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
||+||+++.++.+||+|||.++....... ........+++.|+|||++ .+..++.++|||||
T Consensus 164 kp~Nili~~~~~~kl~D~g~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~sl 225 (304)
T cd05101 164 AARNVLVTENNVMKIADFGLARDVNNIDY------YKKTTNGRLPVKWMAPEAL------------FDRVYTHQSDVWSF 225 (304)
T ss_pred ccceEEEcCCCcEEECCCccceecccccc------cccccCCCCCceeeCchhh------------ccCCCCchhhHHHH
Confidence 99999999999999999999986532111 1111223456789999654 35678899999999
Q ss_pred HHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCC
Q 001908 897 GVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER 975 (997)
Q Consensus 897 Gvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 975 (997)
||++|||++ |..||... ...+......... . ...+..++..+.+++.+||+.+|++|
T Consensus 226 G~~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~~li~~cl~~~p~~R 283 (304)
T cd05101 226 GVLMWEIFTLGGSPYPGI-----PVEELFKLLKEGH-----R------------MDKPANCTNELYMMMRDCWHAIPSHR 283 (304)
T ss_pred HHHHHHHHcCCCCCcccC-----CHHHHHHHHHcCC-----c------------CCCCCCCCHHHHHHHHHHcccChhhC
Confidence 999999998 78887532 2222221110000 0 00112345678899999999999999
Q ss_pred CCHHHHHHHHHHHHH
Q 001908 976 MEMRDVLAKLCAARQ 990 (997)
Q Consensus 976 ps~~evl~~L~~~~~ 990 (997)
|++.|+++.|.++..
T Consensus 284 ps~~e~l~~l~~~~~ 298 (304)
T cd05101 284 PTFKQLVEDLDRILT 298 (304)
T ss_pred CCHHHHHHHHHHHHH
Confidence 999999999998765
No 185
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=5.6e-34 Score=323.52 Aligned_cols=274 Identities=22% Similarity=0.245 Sum_probs=196.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 753 (997)
..++|++.+.||+|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++.... ....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 457899999999999999999999989999999998632 3334567889999999999999999999865322 1223
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...|+||||+++ ++.+.+.. .++...+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~--------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~D 166 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 166 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEec
Confidence 458999999965 67776643 267788899999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++.... ........||+.|+|||++ .+..++.++||||+||++|||++|+.||...
T Consensus 167 fg~a~~~~~---------~~~~~~~~~t~~y~aPE~~------------~~~~~~~~~DiwSlG~il~el~tg~~pf~~~ 225 (359)
T cd07876 167 FGLARTACT---------NFMMTPYVVTRYYRAPEVI------------LGMGYKENVDIWSVGCIMGELVKGSVIFQGT 225 (359)
T ss_pred CCCcccccc---------CccCCCCcccCCCCCchhc------------cCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 999975421 1112335689999999655 3567889999999999999999999999743
Q ss_pred cCCCccHHHHHHhhc-c-hhhh--------hhc--Cccccc--------ccccchhhhhHHHHHHHHHHHHhhcCCCCCC
Q 001908 914 FQGGLTLHEFCKMAL-P-EKVM--------ETV--DPSLLL--------AWSDGRRRAKVEECLVTVIRIGVACSMESPI 973 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~-~-~~~~--------~~~--d~~~~~--------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 973 (997)
... ........... + .... ... .+.... .+..............++.+++.+|+..||+
T Consensus 226 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~ 304 (359)
T cd07876 226 DHI-DQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPD 304 (359)
T ss_pred CHH-HHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcc
Confidence 211 01111111000 0 0000 000 000000 0000000000111235678999999999999
Q ss_pred CCCCHHHHHHH
Q 001908 974 ERMEMRDVLAK 984 (997)
Q Consensus 974 ~Rps~~evl~~ 984 (997)
+|||+.|+++.
T Consensus 305 ~R~t~~e~l~h 315 (359)
T cd07876 305 KRISVDEALRH 315 (359)
T ss_pred cCCCHHHHhcC
Confidence 99999999873
No 186
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.4e-34 Score=320.28 Aligned_cols=238 Identities=27% Similarity=0.355 Sum_probs=184.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+++.+++.||+|++.... ......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~-----~~~~~~~lv~ 75 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTADKLYFVL 75 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE-----EeCCEEEEEE
Confidence 46899999999999999999999999986432 223344555555 46778999999999884 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~ 146 (323)
T cd05575 76 DYVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (323)
T ss_pred cCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCccc
Confidence 9999999999997654 478888999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||... ..
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslG~il~ell~g~~pf~~~-----~~ 201 (323)
T cd05575 147 IE--------HSKTTSTFCGTPEYLAPEVLR------------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DT 201 (323)
T ss_pred cc--------CCCccccccCChhhcChhhhc------------CCCCCccccccccchhhhhhhcCCCCCCCC-----CH
Confidence 11 111223457899999996553 567889999999999999999999999743 12
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
.+......... ... ....+..+.+++.+|++.||++||+++
T Consensus 202 ~~~~~~i~~~~------~~~------------~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 202 AEMYDNILNKP------LRL------------KPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 22211111100 000 001244677899999999999999985
No 187
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2e-34 Score=320.98 Aligned_cols=195 Identities=29% Similarity=0.406 Sum_probs=168.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-C-----CCcceEEeeeeccCcCCC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-H-----RNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h-----~niv~l~~~~~~~~~~~~ 753 (997)
+|.+.+.||+|+||.|-+|.+..+++.||||+++... .-..+...|+.+|..++ | -|+|++++| |.-.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k-~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~-----F~fr 260 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK-RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDY-----FYFR 260 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh-HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeec-----cccc
Confidence 7899999999999999999999999999999997543 33456678999999986 4 489999999 5667
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC--cEEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAHV 831 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~--~~kl 831 (997)
++.|||+|.+ .-+|+++++..... .++...++.++.||+.||.+||+. +|||+||||+|||+.+.+ .+||
T Consensus 261 ~HlciVfELL-~~NLYellK~n~f~----Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKV 332 (586)
T KOG0667|consen 261 NHLCIVFELL-STNLYELLKNNKFR----GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKV 332 (586)
T ss_pred cceeeeehhh-hhhHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeE
Confidence 7999999999 55999999987643 489999999999999999999999 999999999999997654 7999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+... .....+..+..|+|| |++.|.+|+.+.||||||||++||++|.+-|.
T Consensus 333 IDFGSSc~~~-----------q~vytYiQSRfYRAP------------EVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 333 IDFGSSCFES-----------QRVYTYIQSRFYRAP------------EVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred EecccccccC-----------Ccceeeeeccccccc------------hhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 9999998652 122356788999999 55668999999999999999999999977765
No 188
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.1e-34 Score=329.09 Aligned_cols=260 Identities=20% Similarity=0.246 Sum_probs=192.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+|++.+.||+|+||+||+|+...+++.||||++.... ......+.+|++++++++|+||+++++++ ...+.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 75 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF-----QDKDN 75 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE-----EcCCE
Confidence 36889999999999999999999899999999986322 23346788999999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+.. .++...+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~E~~~~g~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 76 LYFVMDYIPGGDMMSLLIRLG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999999999998754 367788889999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCC---------------c--------------------cccccccccccccccccCCcchhcccccCccc
Q 001908 836 LARFLFARPFDT---------------S--------------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLE 880 (997)
Q Consensus 836 ~a~~~~~~~~~~---------------~--------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e 880 (997)
+|.......... . ...........||+.|+|||++.
T Consensus 147 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~--------- 217 (376)
T cd05598 147 LCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL--------- 217 (376)
T ss_pred CCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc---------
Confidence 985331000000 0 00000112357999999996654
Q ss_pred cCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHH
Q 001908 881 YGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTV 960 (997)
Q Consensus 881 ~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l 960 (997)
+..++.++|||||||++|||++|+.||..... .+......... .....+. ......++
T Consensus 218 ---~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~~i~~~~-~~~~~~~-------------~~~~s~~~ 275 (376)
T cd05598 218 ---RTGYTQLCDWWSVGVILYEMLVGQPPFLADTP-----AETQLKVINWE-TTLHIPS-------------QAKLSREA 275 (376)
T ss_pred ---CCCCCcceeeeeccceeeehhhCCCCCCCCCH-----HHHHHHHhccC-ccccCCC-------------CCCCCHHH
Confidence 56788999999999999999999999974321 11111100000 0000000 01123345
Q ss_pred HHHHhhcCCCCCCCCC---CHHHHHHH
Q 001908 961 IRIGVACSMESPIERM---EMRDVLAK 984 (997)
Q Consensus 961 ~~li~~cl~~dP~~Rp---s~~evl~~ 984 (997)
.+++.+|+ .+|++|+ ++.|+++.
T Consensus 276 ~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 276 SDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred HHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 67777766 4999999 88888753
No 189
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-34 Score=310.48 Aligned_cols=265 Identities=23% Similarity=0.312 Sum_probs=202.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEec--ccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
....|++.++||+||.+.||++... +.+.||+|++. ..+......|..|+..|.++ .|.+|+++++|- -.+
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYE-----v~d 432 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYE-----VTD 432 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeee-----ccC
Confidence 4467999999999999999999886 55667777654 44566778999999999999 599999999983 346
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
++.||||||- ..+|..+++++... ..+| .++.+-.|++.|+.++|.. ||||.|+||.|+++ -.|.+||+|
T Consensus 433 ~~lYmvmE~G-d~DL~kiL~k~~~~----~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKLID 502 (677)
T KOG0596|consen 433 GYLYMVMECG-DIDLNKILKKKKSI----DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKLID 502 (677)
T ss_pred ceEEEEeecc-cccHHHHHHhccCC----CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEeee
Confidence 7999999987 66999999988743 2334 7788899999999999999 99999999999999 558999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.|..+.++. +.......+||+.||+||.+..+......+ -..-..++++||||+|||+|+|+.|+.||...
T Consensus 503 FGIA~aI~~DT------TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~-~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~ 575 (677)
T KOG0596|consen 503 FGIANAIQPDT------TSIVKDSQVGTVNYMSPEALTDMSSSRENG-KSKIKISRKSDVWSLGCILYQMVYGKTPFGQI 575 (677)
T ss_pred echhcccCccc------cceeeccccCcccccCHHHHhhccccccCC-CcceeecCccchhhhhhHHHHHHhcCCchHHH
Confidence 99998874432 233445578999999999998764321100 00123678999999999999999999998732
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. -.| .++..+.||...-.|.+... ..++.++|+.|+..||++||+..++++
T Consensus 576 ~------n~~------aKl~aI~~P~~~Iefp~~~~-------~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 576 I------NQI------AKLHAITDPNHEIEFPDIPE-------NDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred H------HHH------HHHHhhcCCCccccccCCCC-------chHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1 111 23444555543222222111 123789999999999999999999975
No 190
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=8.2e-34 Score=312.63 Aligned_cols=271 Identities=23% Similarity=0.271 Sum_probs=204.9
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
.++..++++|++.+.||+|+||.||+|....+++.+|+|++..... ....+.+|+.+++++ +|||++++++++...+.
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISD-VDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccccc-HHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 4445567889999999999999999999998999999999864322 235677899999998 89999999999865443
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
...+..++||||+++++|.++++.... ....+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~k 168 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLI--CGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVK 168 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhh--cCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEE
Confidence 344678999999999999999875321 112478899999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||.+....... .......|+..|+|||.+... ...+..++.++|||||||++|||++|+.||
T Consensus 169 l~dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~~~Di~slGvi~~el~~g~~p~ 233 (291)
T cd06639 169 LVDFGVSAQLTSTR--------LRRNTSVGTPFWMAPEVIACE-------QQYDYSYDARCDVWSLGITAIELGDGDPPL 233 (291)
T ss_pred Eeecccchhccccc--------ccccCccCCccccChhhhcCC-------CCcccccCCccchHHHHHHHHHHhhCCCCC
Confidence 99999987652211 111234688899999877531 112334688999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... ...... . .....+.. ..++.....+.+++.+||..+|++||++.|+++
T Consensus 234 ~~~~~----~~~~~~-~-----~~~~~~~~----------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 234 FDMHP----VKTLFK-I-----PRNPPPTL----------LHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred CCCcH----HHHHHH-H-----hcCCCCCC----------CcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 74321 111100 0 00000010 011123446889999999999999999999975
No 191
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-35 Score=321.31 Aligned_cols=254 Identities=25% Similarity=0.371 Sum_probs=204.2
Q ss_pred cCccCCcccccCcceEEEEEECCCC-c--EEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENG-T--FVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~-~--~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+....+.||+|.||.|++|.|...+ + .||||.++..... ...+|.+|+.+|-+++|+|++++||+..+ ..
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~------qp 184 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD------QP 184 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc------ch
Confidence 3455688999999999999996433 2 5899999866554 67899999999999999999999998543 46
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+||||.++.|+|.+.+++.. ...+-....-.++.|||+||.||.++ +.||||+.++|+++-..-.|||+|||
T Consensus 185 ~mMV~ELaplGSLldrLrka~----~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAK----KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred hhHHhhhcccchHHHHHhhcc----ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccc
Confidence 899999999999999999832 12477788889999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
+.+.+....... .......-.+.|+|||.+. ...++.++|||+|||++|||+| |..||-...
T Consensus 258 LmRaLg~ned~Y-----vm~p~rkvPfAWCaPEsLr------------h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~ 320 (1039)
T KOG0199|consen 258 LMRALGENEDMY-----VMAPQRKVPFAWCAPESLR------------HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCR 320 (1039)
T ss_pred ceeccCCCCcce-----EecCCCcCcccccCHhHhc------------cccccccchhhhhhhhHHhhhccCCCCCCCCC
Confidence 999874433221 1122233467899996654 6789999999999999999999 788876321
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
...+.+.+| ++.+.+.++.|+++++++++.||.++|++|||+.++.+.+
T Consensus 321 --------------g~qIL~~iD--------~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 321 --------------GIQILKNID--------AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred --------------HHHHHHhcc--------ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 011222223 3445566788999999999999999999999999997443
No 192
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.7e-34 Score=317.03 Aligned_cols=267 Identities=25% Similarity=0.392 Sum_probs=203.0
Q ss_pred hhcCccCCcccccCcceEEEEEECC-------CCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
.++|.+.+.||+|+||.||+|++.. +...+|+|+++.. .......+.+|+++++.+ +|+||++++++|..
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 3679999999999999999998642 2357999999743 234456788899999999 79999999999643
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
.+..++||||+++|+|.+++....... ....+++.++++++.|++.|++|||+. +++||||||
T Consensus 96 ----~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 168 (307)
T cd05098 96 ----DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAA 168 (307)
T ss_pred ----CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccH
Confidence 457899999999999999998753210 122478999999999999999999998 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++++||+|||.++....... ........++..|+|||.+ .+..++.++|||||||
T Consensus 169 ~Nill~~~~~~kL~dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwslG~ 230 (307)
T cd05098 169 RNVLVTEDNVMKIADFGLARDIHHIDY------YKKTTNGRLPVKWMAPEAL------------FDRIYTHQSDVWSFGV 230 (307)
T ss_pred HheEEcCCCcEEECCCcccccccccch------hhccccCCCccceeChHHh------------ccCCCCcHHHHHHHHH
Confidence 999999999999999999876522110 0011112345689999654 3566889999999999
Q ss_pred HHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 899 MLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 899 vl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++|||++ |..||... ...+......... ....+..++.++.+++.+||..+|++||+
T Consensus 231 ~l~el~~~g~~p~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps 288 (307)
T cd05098 231 LLWEIFTLGGSPYPGV-----PVEELFKLLKEGH-----------------RMDKPSNCTNELYMMMRDCWHAVPSQRPT 288 (307)
T ss_pred HHHHHHcCCCCCCCcC-----CHHHHHHHHHcCC-----------------CCCCCCcCCHHHHHHHHHHcccChhhCcC
Confidence 9999998 88887532 2222211110000 00111234567889999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 001908 978 MRDVLAKLCAARQTL 992 (997)
Q Consensus 978 ~~evl~~L~~~~~~~ 992 (997)
+.++++.|.++.+..
T Consensus 289 ~~evl~~l~~~~~~~ 303 (307)
T cd05098 289 FKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988753
No 193
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=5.2e-34 Score=308.68 Aligned_cols=254 Identities=26% Similarity=0.447 Sum_probs=196.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|... .+..||+|.+..... ..+.+.+|++++++++|+|++++++++. ....+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~------~~~~~ 76 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS------EEPIY 76 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC------CCCcE
Confidence 357889999999999999999886 667799999875333 2367899999999999999999998752 23578
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +|+||||||+||++++++.+|++|||.+
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~ 149 (260)
T cd05070 77 IVTEYMSKGSLLDFLKDGEG----RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLA 149 (260)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceee
Confidence 99999999999999986431 2478999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
....... ........++..|+|||.+ .+..++.++||||||+++|||++ |..||....
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-- 208 (260)
T cd05070 150 RLIEDNE-------YTARQGAKFPIKWTAPEAA------------LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-- 208 (260)
T ss_pred eeccCcc-------cccccCCCCCccccChHHH------------hcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC--
Confidence 7642211 0111123356789999654 35668899999999999999999 888986421
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+........ .. .+.+...+.++.+++.+|+..+|++|||+.++.+.|++
T Consensus 209 ---~~~~~~~~~~~-----~~------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 209 ---NREVLEQVERG-----YR------------MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---HHHHHHHHHcC-----CC------------CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111111000 00 01112335578899999999999999999999988864
No 194
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=6.6e-34 Score=309.69 Aligned_cols=254 Identities=28% Similarity=0.399 Sum_probs=193.0
Q ss_pred CcccccCcceEEEEEECCCCc--EEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGT--FVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+...++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.. .+..++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-----~~~~~lv~ 75 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH-----RGYLYLAI 75 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-----CCCceEEE
Confidence 368999999999999987765 4688888643 334456788999999999 79999999998643 45789999
Q ss_pred eeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 761 EYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
||+++|+|.+++...... .....+++.+++.++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~k 152 (270)
T cd05047 76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAK 152 (270)
T ss_pred EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEE
Confidence 999999999999865421 1122478899999999999999999998 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRP 909 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P 909 (997)
++|||++..... .........+..|+|||.+ .+..++.++|||||||++|||++ |..|
T Consensus 153 l~dfgl~~~~~~---------~~~~~~~~~~~~y~apE~~------------~~~~~~~~~Di~slG~il~el~~~g~~p 211 (270)
T cd05047 153 IADFGLSRGQEV---------YVKKTMGRLPVRWMAIESL------------NYSVYTTNSDVWSYGVLLWEIVSLGGTP 211 (270)
T ss_pred ECCCCCccccch---------hhhccCCCCccccCChHHH------------ccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence 999999853210 0111112345679999654 35668899999999999999997 9999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
|.... ..+........ ... ..+..++.++.+++.+||+.+|.+|||+.|+++.|.++.
T Consensus 212 f~~~~-----~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 212 YCGMT-----CAELYEKLPQG-----YRL------------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred ccccC-----HHHHHHHHhCC-----CCC------------CCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 86421 11111111000 000 011123456889999999999999999999999998864
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=3e-34 Score=309.62 Aligned_cols=251 Identities=20% Similarity=0.295 Sum_probs=198.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+|++.++||+|+||.||++++..+++.||+|.++. ......+.+.+|+++++.++|+||+++.+++ ...+..++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~l 75 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESF-----EADGHLYI 75 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEE-----EECCEEEE
Confidence 47888999999999999999999999999999863 2344557788999999999999999999984 44568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.+++...... .++...++.++.|++.|+.|||++ +|+|+||||+||++++++.++++|||.+.
T Consensus 76 v~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~ 148 (255)
T cd08219 76 VMEYCDGGDLMQKIKLQRGK----LFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSAR 148 (255)
T ss_pred EEeeCCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcce
Confidence 99999999999998764322 367888999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........|++.|+|||++. +..++.++||||||+++|+|++|..||...
T Consensus 149 ~~~~~--------~~~~~~~~~~~~~~aPE~~~------------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~----- 203 (255)
T cd08219 149 LLTSP--------GAYACTYVGTPYYVPPEIWE------------NMPYNNKSDIWSLGCILYELCTLKHPFQAN----- 203 (255)
T ss_pred eeccc--------ccccccccCCccccCHHHHc------------cCCcCchhhhhhhchhheehhhccCCCCCC-----
Confidence 54211 11122356888999997654 456888999999999999999999998732
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
............. .. +.+..+...+.+++.+||+.||++||++.+++.+
T Consensus 204 ~~~~~~~~~~~~~----~~-------------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 204 SWKNLILKVCQGS----YK-------------PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CHHHHHHHHhcCC----CC-------------CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 1111111110000 00 0011234467799999999999999999999865
No 196
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4e-34 Score=324.31 Aligned_cols=275 Identities=20% Similarity=0.214 Sum_probs=198.0
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKG 752 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 752 (997)
...++|+..+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++.... ...
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 93 (355)
T cd07874 14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEE 93 (355)
T ss_pred hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccc
Confidence 4557899999999999999999999889999999998642 3334567789999999999999999999865322 123
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++||||+++ ++.+.+.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+
T Consensus 94 ~~~~~lv~e~~~~-~l~~~~~~--------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~ 161 (355)
T cd07874 94 FQDVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 161 (355)
T ss_pred cceeEEEhhhhcc-cHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEe
Confidence 3468999999954 77777753 267888999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+++.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 162 Dfg~~~~~~~---------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 162 DFGLARTAGT---------SFMMTPYVVTRYYRAPEVIL------------GMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred eCcccccCCC---------ccccCCccccCCccCHHHHc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 9999975421 11123356899999996553 56788999999999999999999999974
Q ss_pred CcCCCccHHHHHHhhc--chhhhhhcCccccc---------------ccccch---hhhhHHHHHHHHHHHHhhcCCCCC
Q 001908 913 MFQGGLTLHEFCKMAL--PEKVMETVDPSLLL---------------AWSDGR---RRAKVEECLVTVIRIGVACSMESP 972 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~---------------~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP 972 (997)
.... ..+........ .........+.... .+.+.. ..........++.+++.+|+..||
T Consensus 221 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP 299 (355)
T cd07874 221 RDYI-DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299 (355)
T ss_pred CCHH-HHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCc
Confidence 3211 01111111000 00000000000000 000000 000011123467899999999999
Q ss_pred CCCCCHHHHHHH
Q 001908 973 IERMEMRDVLAK 984 (997)
Q Consensus 973 ~~Rps~~evl~~ 984 (997)
++|||+.|+++.
T Consensus 300 ~~Rps~~ell~h 311 (355)
T cd07874 300 AKRISVDEALQH 311 (355)
T ss_pred hhcCCHHHHhcC
Confidence 999999999874
No 197
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=6.2e-34 Score=308.11 Aligned_cols=253 Identities=26% Similarity=0.429 Sum_probs=195.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|.+.++||+|+||.||+|.+.. +..+|+|++.... ...+.+.+|++++++++|+|++++++++. .+..++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~-~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~~ 77 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNG-TTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS------EEPIYI 77 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcC-CceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc------CCCcEE
Confidence 568889999999999999999864 4569999886433 23467889999999999999999998752 235789
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.++++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.+.
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~ 150 (260)
T cd05069 78 VTEFMGKGSLLDFLKEGDG----KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLAR 150 (260)
T ss_pred EEEcCCCCCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccce
Confidence 9999999999999986432 2478899999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
...... ........++..|+|||.. .+..++.++|||||||++|||+| |+.||.....
T Consensus 151 ~~~~~~-------~~~~~~~~~~~~y~~Pe~~------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 209 (260)
T cd05069 151 LIEDNE-------YTARQGAKFPIKWTAPEAA------------LYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN-- 209 (260)
T ss_pred EccCCc-------ccccCCCccchhhCCHHHh------------ccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 652111 1111223456789999644 45678899999999999999999 8999864311
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.+..... .....+ +.+...+..+.+++.+||+.+|++||+++++.+.|++
T Consensus 210 ---~~~~~~~-----~~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 210 ---REVLEQV-----ERGYRM------------PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---HHHHHHH-----HcCCCC------------CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 1111110 000000 0112235678899999999999999999999999874
No 198
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.4e-33 Score=311.43 Aligned_cols=268 Identities=23% Similarity=0.387 Sum_probs=197.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCC--------------CcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGEN--------------GTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKII 742 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~--------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~ 742 (997)
.++|++.++||+|+||.||+|+.... ...||+|+++.. .......+.+|++++++++|+|+++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 35799999999999999999987532 235899998743 334456789999999999999999999
Q ss_pred eeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCC------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 001908 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816 (997)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 816 (997)
+++. .....++||||+++++|.+++...... .....+++..+++++.|++.|++|||+. +++||||
T Consensus 84 ~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dl 155 (295)
T cd05097 84 GVCV-----SDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDL 155 (295)
T ss_pred EEEc-----CCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---Ceecccc
Confidence 9954 455789999999999999999754311 1112468889999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 817 KPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
||+||++++++.+|++|||++....... .........++..|+|||.+ .++.++.++|||||
T Consensus 156 kp~Nill~~~~~~kl~dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwSl 217 (295)
T cd05097 156 ATRNCLVGNHYTIKIADFGMSRNLYSGD------YYRIQGRAVLPIRWMAWESI------------LLGKFTTASDVWAF 217 (295)
T ss_pred ChhhEEEcCCCcEEecccccccccccCc------ceeccCcCcCceeecChhhh------------ccCCcCchhhHHHH
Confidence 9999999999999999999997652211 11111223457789999654 35678999999999
Q ss_pred HHHHHHHHh--CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 897 GVMLLEMFT--RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 897 Gvvl~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
||++|||++ +..||...... ..+... ...... ....... .....++..+.+++.+||..+|++
T Consensus 218 G~~l~el~~~~~~~p~~~~~~~-~~~~~~-~~~~~~-----~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~ 282 (295)
T cd05097 218 GVTLWEMFTLCKEQPYSLLSDE-QVIENT-GEFFRN-----QGRQIYL--------SQTPLCPSPVFKLMMRCWSRDIKD 282 (295)
T ss_pred HHHHHHHHHcCCCCCCcccChH-HHHHHH-HHhhhh-----ccccccC--------CCCCCCCHHHHHHHHHHcCCCchh
Confidence 999999998 56676632111 111110 000000 0000000 001123467899999999999999
Q ss_pred CCCHHHHHHHHH
Q 001908 975 RMEMRDVLAKLC 986 (997)
Q Consensus 975 Rps~~evl~~L~ 986 (997)
||++.+|++.|+
T Consensus 283 RPs~~~i~~~l~ 294 (295)
T cd05097 283 RPTFNKIHHFLR 294 (295)
T ss_pred CcCHHHHHHHHh
Confidence 999999999886
No 199
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.5e-33 Score=304.33 Aligned_cols=249 Identities=29% Similarity=0.400 Sum_probs=196.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||+|.. .+..||+|.++... ..+.+.+|++++++++|+|++++++++. ...+..++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~--~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~l 77 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLYI 77 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEE--cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEE----cCCCceEE
Confidence 4788899999999999999987 57889999986432 3467889999999999999999998753 33457899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++.+... ..+++..++.++.|++.|++|||++ +|+||||||+||++++++.+|++|||+++
T Consensus 78 v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~ 150 (256)
T cd05082 78 VTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK 150 (256)
T ss_pred EEECCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccce
Confidence 9999999999999987542 2378889999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
..... .....++..|+|||.+. +..++.++|||||||++|||++ |+.||...
T Consensus 151 ~~~~~-----------~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~---- 203 (256)
T cd05082 151 EASST-----------QDTGKLPVKWTAPEALR------------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRI---- 203 (256)
T ss_pred ecccc-----------CCCCccceeecCHHHHc------------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCC----
Confidence 54211 11223456899996553 4668889999999999999998 99998632
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
...+........ ..+ ..+..++..+.+++.+||+.+|++|||+.++++.|++
T Consensus 204 -~~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 204 -PLKDVVPRVEKG-----YKM------------DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred -CHHHHHHHHhcC-----CCC------------CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 122221111000 000 0112345678899999999999999999999998875
No 200
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.5e-34 Score=314.81 Aligned_cols=262 Identities=23% Similarity=0.380 Sum_probs=200.1
Q ss_pred HHhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQ-KGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
...++|.+.+.||+|+||.||+|.+ ...+..||+|+++... ....+.+.+|+++++++ +|+||+++++++.
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 109 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACT-- 109 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEe--
Confidence 3446799999999999999999975 2345689999987432 33456789999999999 7999999999864
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
..+..++||||+++|+|.++++.... ..+++.++..++.|++.|++|||++ +|+|+||||+||+++.++.
T Consensus 110 ---~~~~~~lv~e~~~~~~L~~~i~~~~~----~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~ 179 (302)
T cd05055 110 ---IGGPILVITEYCCYGDLLNFLRRKRE----SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKI 179 (302)
T ss_pred ---cCCceEEEEEcCCCCcHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCe
Confidence 34578999999999999999986432 1378999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RR 907 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~ 907 (997)
+|++|||.++....... ........++..|+|||.+ .+..++.++||||+||++|||++ |.
T Consensus 180 ~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DiwslGvil~el~t~g~ 241 (302)
T cd05055 180 VKICDFGLARDIMNDSN------YVVKGNARLPVKWMAPESI------------FNCVYTFESDVWSYGILLWEIFSLGS 241 (302)
T ss_pred EEECCCcccccccCCCc------eeecCCCCcccccCCHhhh------------ccCCCCcHhHHHHHHHHHHHHHhCCC
Confidence 99999999976522110 0111223457789999654 35668899999999999999998 99
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.||....... ...+... ....+. .+...+.++.+++.+||..+|++||++.|+++.|++
T Consensus 242 ~p~~~~~~~~-~~~~~~~--------~~~~~~------------~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 242 NPYPGMPVDS-KFYKLIK--------EGYRMA------------QPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCcCCCCchH-HHHHHHH--------cCCcCC------------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHh
Confidence 9986432111 0111100 000000 001123567899999999999999999999999987
Q ss_pred H
Q 001908 988 A 988 (997)
Q Consensus 988 ~ 988 (997)
+
T Consensus 301 ~ 301 (302)
T cd05055 301 Q 301 (302)
T ss_pred h
Confidence 4
No 201
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=5.8e-34 Score=318.72 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=188.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+...+++.||+|+++.. .....+.+.+|+.++.++ +|++|+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~ 75 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF-----QTTSRLFLVI 75 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE-----EeCCEEEEEE
Confidence 4699999999999999999999999999743 233456788999999888 699999999984 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~ 146 (327)
T cd05617 76 EYVNGGDLMFHMQRQR------KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEG 146 (327)
T ss_pred eCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceec
Confidence 9999999999987654 488999999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC-cc
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG-LT 919 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~-~~ 919 (997)
.. .........||+.|+|||.+ .+..++.++|||||||++|||++|+.||....... ..
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~ 206 (327)
T cd05617 147 LG--------PGDTTSTFCGTPNYIAPEIL------------RGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMN 206 (327)
T ss_pred cC--------CCCceecccCCcccCCHHHH------------CCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccc
Confidence 11 11122345799999999655 35678899999999999999999999996432211 11
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
..+.......... .. .+......+.+++.+|++.||++|++++
T Consensus 207 ~~~~~~~~~~~~~-----~~------------~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 207 TEDYLFQVILEKP-----IR------------IPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred cHHHHHHHHHhCC-----CC------------CCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 1111111110000 00 0111234567899999999999999854
No 202
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=7.6e-34 Score=316.30 Aligned_cols=267 Identities=24% Similarity=0.394 Sum_probs=202.2
Q ss_pred hhcCccCCcccccCcceEEEEEEC-------CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-------ENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
.++|.+.++||+|+||.||+|+.. .....||+|+++.. .......+.+|+++++++ +||||++++++|.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~-- 88 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCT-- 88 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEc--
Confidence 467889999999999999999763 23457999998743 234456788999999999 6999999999864
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
..+..++||||+++|+|.+++...... .....+++.++.+++.|++.|++|||++ +|+||||||
T Consensus 89 ---~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp 162 (314)
T cd05099 89 ---QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAA 162 (314)
T ss_pred ---cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeeccccc
Confidence 345789999999999999999875321 1123488999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++.+|++|||.++........ .......++..|+|||.+ .+..++.++|||||||
T Consensus 163 ~Nill~~~~~~kL~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DiwslG~ 224 (314)
T cd05099 163 RNVLVTEDNVMKIADFGLARGVHDIDYY------KKTSNGRLPVKWMAPEAL------------FDRVYTHQSDVWSFGI 224 (314)
T ss_pred eeEEEcCCCcEEEccccccccccccccc------cccccCCCCccccCHHHH------------ccCCcCccchhhHHHH
Confidence 9999999999999999999765221110 011112345679999654 3567889999999999
Q ss_pred HHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 899 MLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 899 vl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++|||++ |..||.... ..+.......... . ..+..++.++.+++.+||+.+|++||+
T Consensus 225 ~l~el~~~g~~p~~~~~-----~~~~~~~~~~~~~-----~------------~~~~~~~~~l~~li~~cl~~~p~~Rps 282 (314)
T cd05099 225 LMWEIFTLGGSPYPGIP-----VEELFKLLREGHR-----M------------DKPSNCTHELYMLMRECWHAVPTQRPT 282 (314)
T ss_pred HHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCC-----C------------CCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 9999999 888886321 1111111100000 0 011233557789999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 001908 978 MRDVLAKLCAARQTL 992 (997)
Q Consensus 978 ~~evl~~L~~~~~~~ 992 (997)
+.|+++.|.++....
T Consensus 283 ~~~ll~~l~~~~~~~ 297 (314)
T cd05099 283 FKQLVEALDKVLAAV 297 (314)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987654
No 203
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=4.6e-34 Score=314.11 Aligned_cols=262 Identities=27% Similarity=0.436 Sum_probs=199.7
Q ss_pred hhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||.||+|... .++..||+|++.... ....+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~----- 78 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCA----- 78 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEc-----
Confidence 467999999999999999999874 257789999987432 334567889999999999999999999854
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCC----------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQ----------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
..+..++||||+++|+|.+++...... .....+++..++.++.|++.|++|||+. +++|||
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~d 155 (288)
T cd05050 79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRD 155 (288)
T ss_pred CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---Ceeccc
Confidence 345789999999999999999854311 1123478889999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHH
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwS 895 (997)
|||+||+++.++.+|++|||.+..+..... .........+..|+|||.+ .+..++.++||||
T Consensus 156 l~p~nil~~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~s 217 (288)
T cd05050 156 LATRNCLVGENMVVKIADFGLSRNIYSADY------YKASENDAIPIRWMPPESI------------FYNRYTTESDVWA 217 (288)
T ss_pred ccHhheEecCCCceEECccccceecccCcc------ccccCCCccChhhcCHHHH------------hcCCCCchhHHHH
Confidence 999999999999999999999876532211 0111122345679999654 3567899999999
Q ss_pred HHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 896 LGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 896 lGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
|||++|||++ |..||.... ..+.......... .+.+..++.++.+++.+||..+|++
T Consensus 218 lG~il~el~~~~~~p~~~~~-----~~~~~~~~~~~~~-----------------~~~~~~~~~~l~~li~~~l~~~p~~ 275 (288)
T cd05050 218 YGVVLWEIFSYGMQPYYGMA-----HEEVIYYVRDGNV-----------------LSCPDNCPLELYNLMRLCWSKLPSD 275 (288)
T ss_pred HHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhcCCC-----------------CCCCCCCCHHHHHHHHHHcccCccc
Confidence 9999999998 888876321 1222111111000 0011123567889999999999999
Q ss_pred CCCHHHHHHHHHH
Q 001908 975 RMEMRDVLAKLCA 987 (997)
Q Consensus 975 Rps~~evl~~L~~ 987 (997)
|||+.|+++.|++
T Consensus 276 Rpt~~el~~~l~~ 288 (288)
T cd05050 276 RPSFASINRILQR 288 (288)
T ss_pred CCCHHHHHHHhhC
Confidence 9999999999863
No 204
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.4e-34 Score=306.74 Aligned_cols=250 Identities=31% Similarity=0.462 Sum_probs=198.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||.||+|.. .++.||+|+++.... ..+.+.+|+.++++++|+||+++++++. ..+..+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--~~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 76 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--RGQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVL-----QGNPLY 76 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--cCcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEc-----CCCCeE
Confidence 45788999999999999999998 588999999975543 5678899999999999999999999854 356799
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~ 149 (256)
T cd05039 77 IVTEYMAKGSLVDYLRSRGR----AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLA 149 (256)
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccccc
Confidence 99999999999999986542 1478999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+..... .....++..|+|||.+ .++.++.++||||||+++||+++ |+.||....
T Consensus 150 ~~~~~~-----------~~~~~~~~~~~ape~~------------~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-- 204 (256)
T cd05039 150 KEASQG-----------QDSGKLPVKWTAPEAL------------REKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP-- 204 (256)
T ss_pred cccccc-----------cccCCCcccccCchhh------------cCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCC--
Confidence 765111 0112345679999644 35678889999999999999997 999986331
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+........ ..+ ..+..++..+.+++.+||..+|++||++.|++++|.+
T Consensus 205 ---~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 205 ---LKDVVPHVEKG-----YRM------------EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred ---HHHHHHHHhcC-----CCC------------CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 11111110000 000 0011235678899999999999999999999999875
No 205
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.2e-33 Score=307.43 Aligned_cols=264 Identities=22% Similarity=0.334 Sum_probs=189.8
Q ss_pred CcccccCcceEEEEEEC--CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILG--ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|.+. .++..+|+|.++... ......+.+|+.++++++||||+++++++. .....++|||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCT-----EVTPYLLVME 75 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEc-----CCCCcEEEEE
Confidence 46899999999999874 245679999886433 233457889999999999999999999854 3457899999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++...... .....++..+.+++.|++.|++|||+. +++||||||+||+++.++++|++|||.++...
T Consensus 76 ~~~~g~L~~~l~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~ 151 (269)
T cd05087 76 FCPLGDLKGYLRSCRKA-ELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKY 151 (269)
T ss_pred CCCCCcHHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcccccccc
Confidence 99999999999864321 122356778889999999999999999 99999999999999999999999999987542
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
.... ........++..|+|||++..... ......++.++|||||||++|||++ |+.||....... .
T Consensus 152 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~-----~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~--~ 218 (269)
T cd05087 152 KEDY------YVTPDQLWVPLRWIAPELVDEVHG-----NLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQ--V 218 (269)
T ss_pred Ccce------eecCCCcCCcccccCHhHhccccc-----cccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHH--H
Confidence 2111 111223457888999988753210 0112346889999999999999996 999986432111 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
... ..........++.... .....+.+++..|| .+|++|||++||++.|.
T Consensus 219 ~~~---~~~~~~~~~~~~~~~~------------~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 219 LTY---TVREQQLKLPKPRLKL------------PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred HHH---HhhcccCCCCCCccCC------------CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 111 0001111111111110 12345678999999 58999999999998874
No 206
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=4.7e-34 Score=309.07 Aligned_cols=254 Identities=24% Similarity=0.442 Sum_probs=197.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|..+ +++.||+|++..... ....+.+|++++++++|+|++++++++. .+..+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~~ 76 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT------QEPIY 76 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc------cCCcE
Confidence 467899999999999999999976 678899999874332 3467889999999999999999998742 34689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++....+ ..+++.++..++.|++.|++|||+. +++||||||+||++++++.++++|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 149 (260)
T cd05067 77 IITEYMENGSLVDFLKTPEG----IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLA 149 (260)
T ss_pred EEEEcCCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcce
Confidence 99999999999999876442 2478899999999999999999998 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
........ .......++..|+|||.+ .+..++.++|||||||++||+++ |+.||....
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~y~~pe~~------------~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~-- 208 (260)
T cd05067 150 RLIEDNEY-------TAREGAKFPIKWTAPEAI------------NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT-- 208 (260)
T ss_pred eecCCCCc-------ccccCCcccccccCHHHh------------ccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--
Confidence 76521111 111223456789999654 35668889999999999999999 999987432
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+...... ..... +.+...+.++.+++.+||+.+|++||+++++...|+.
T Consensus 209 ---~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 209 ---NPEVIQNLE-----RGYRM------------PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---hHHHHHHHH-----cCCCC------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 111111110 00000 0011234578899999999999999999999998874
No 207
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-36 Score=349.42 Aligned_cols=257 Identities=26% Similarity=0.363 Sum_probs=203.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
-+|+...+||.|.||.||-|...++|...|+|.++.. .....+.+.+|..++..++|||+|+++|+ -...+..
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGV-----EvHRekv 1309 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGV-----EVHREKV 1309 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCce-----eecHHHH
Confidence 4677889999999999999999999999999988743 23445678899999999999999999998 3445689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
+|.||||++|+|.+.+...+ -.++.....+..|++.|++|||+. |||||||||.||+++.+|.+|++|||.
T Consensus 1310 ~IFMEyC~~GsLa~ll~~gr------i~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGs 1380 (1509)
T KOG4645|consen 1310 YIFMEYCEGGSLASLLEHGR------IEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGS 1380 (1509)
T ss_pred HHHHHHhccCcHHHHHHhcc------hhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccc
Confidence 99999999999999998765 256667778899999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|..+.+... ..........||+.|||||++.+.. +.+...++||||+|||+.||+||+.||.....+
T Consensus 1381 a~ki~~~~~----~~~~el~~~~GT~~YMAPEvit~t~---------~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne 1447 (1509)
T KOG4645|consen 1381 AVKIKNNAQ----TMPGELQSMMGTPMYMAPEVITGTK---------GKGHGGAADIWSLGCVVLEMATGKRPWAELDNE 1447 (1509)
T ss_pred eeEecCchh----cCCHHHHhhcCCchhcCchhhcccc---------cCCCCcchhhhcccceEEEeecCCCchhhccch
Confidence 998855421 1123345678999999998886532 244566899999999999999999998754322
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
-..+..... +...+.|+....+=.+++..|+..||++|.++.|+++
T Consensus 1448 ~aIMy~V~~---------------------gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1448 WAIMYHVAA---------------------GHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred hHHHhHHhc---------------------cCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 222221111 1111222333445568899999999999999987765
No 208
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-35 Score=316.31 Aligned_cols=248 Identities=27% Similarity=0.367 Sum_probs=198.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
-|...+.||.|+||.||-|++..+.+.||||++.... .+.-.++.+|+..|++++|||++.+-|+|. .+...
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyL-----re~Ta 101 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYL-----REHTA 101 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceee-----ccchH
Confidence 4666788999999999999999999999999997443 333467899999999999999999999853 34568
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+||||| -|+-.|.+.-.. .++....+..|..+.+.||+|||+. +.||||||+.|||+++.|.||++|||.
T Consensus 102 WLVMEYC-lGSAsDlleVhk-----KplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 102 WLVMEYC-LGSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred HHHHHHH-hccHHHHHHHHh-----ccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccc
Confidence 9999999 568888776543 2477889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|.... ....++|||.|||||++-.+. .+.|+-++||||+||+..|+.-.++|+-.+
T Consensus 173 Asi~~------------PAnsFvGTPywMAPEVILAMD---------EGqYdgkvDvWSLGITCIELAERkPPlFnM--- 228 (948)
T KOG0577|consen 173 ASIMA------------PANSFVGTPYWMAPEVILAMD---------EGQYDGKVDVWSLGITCIELAERKPPLFNM--- 228 (948)
T ss_pred hhhcC------------chhcccCCccccchhHheecc---------ccccCCccceeeccchhhhhhhcCCCccCc---
Confidence 97652 234578999999999997654 488999999999999999999999996422
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+...+... .--.|.+ ...++...+..++..|+..-|.+|||..++++
T Consensus 229 -NAMSALYHIA------QNesPtL-----------qs~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 229 -NAMSALYHIA------QNESPTL-----------QSNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred -hHHHHHHHHH------hcCCCCC-----------CCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 1122211111 1111111 12345667888999999999999999998865
No 209
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=9.7e-34 Score=310.83 Aligned_cols=274 Identities=25% Similarity=0.378 Sum_probs=203.9
Q ss_pred hcCccCCcccccCcceEEEEEECC----CCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGE----NGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|+..+.||+|+||.||+|++.. ++..||||+++..... ..+.+.+|+++++.++|+||+++++++.. .+.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~---~~~ 80 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEK---PGG 80 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeec---CCC
Confidence 467888999999999999999753 4789999999755443 56789999999999999999999998643 235
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~-----~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 152 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRD-----QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISD 152 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCcc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcc
Confidence 678999999999999999986542 378899999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+........ .........++..|+|||.+ .+..++.++||||||+++|||+||+.|+...
T Consensus 153 fg~~~~~~~~~~-----~~~~~~~~~~~~~~~~Pe~~------------~~~~~~~~~Di~slG~~l~el~tg~~p~~~~ 215 (284)
T cd05038 153 FGLAKVLPEDKD-----YYYVKEPGESPIFWYAPECL------------RTSKFSSASDVWSFGVTLYELFTYGDPSQSP 215 (284)
T ss_pred cccccccccCCc-----ceeccCCCCCcccccCcHHH------------ccCCCCcccchHHHhhhhheeeccCCCcccc
Confidence 999987632111 01111123455679999654 3457888999999999999999999997643
Q ss_pred cCCCccHHHHHHh-hcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKM-ALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
......+...... .......+..... ...+.+..++.++.+++.+||+.+|++|||+.|++++|+++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 216 PAEFLRMIGIAQGQMIVTRLLELLKEG--------ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred cchhccccccccccccHHHHHHHHHcC--------CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 2211100000000 0000001111100 01111234557889999999999999999999999999876
No 210
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=289.80 Aligned_cols=272 Identities=22% Similarity=0.335 Sum_probs=205.1
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEEEEEee
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
.+.||+|+|+.|.-++...+|.+||||++.+.....+....+|++++.+.+ |+||++++.+ |+++...|+|||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLief-----FEdd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEF-----FEDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHH-----hcccceEEEEEec
Confidence 367999999999999998899999999998877777889999999999985 9999999999 7788899999999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEEEcccccchh
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLARF 839 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DFg~a~~ 839 (997)
|.||.|..+|+++. .+++.++.++..+|+.||+|||.+ ||.|||+||+|||..+.. -|||+||.++.-
T Consensus 158 m~GGplLshI~~~~------~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg 228 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRK------HFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSG 228 (463)
T ss_pred ccCchHHHHHHHhh------hccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccc
Confidence 99999999999876 588889999999999999999999 999999999999998765 479999998765
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC--CC
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ--GG 917 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~--~~ 917 (997)
+.... +.+..........+|+..|||||+..-..+ ....|+.++|.||+|||+|-|++|.+||...=. -+
T Consensus 229 ~k~~~-~~spastP~L~tPvGSAEfMAPEVVd~fv~-------qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCG 300 (463)
T KOG0607|consen 229 IKLNN-DCSPASTPELLTPVGSAEFMAPEVVDVFVD-------QATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCG 300 (463)
T ss_pred cccCC-CCCCCCCccccCcccchhhcchhHHhhhcc-------ccccccccccHHHHHHHHHHHHhCCCCccCccCCcCC
Confidence 42211 111233344556789999999999864322 234588899999999999999999999974322 11
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+-.+.++. ..+...+.+......+. + ..-.....+-.+++...+..|+..|.++.+++.
T Consensus 301 WdrGe~Cr~-CQ~~LFesIQEGkYeFP-d----kdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRV-CQNKLFESIQEGKYEFP-D----KDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHH-HHHHHHHHHhccCCcCC-h----hhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 111111111 11222233322221110 0 001112234567888888899999999988865
No 211
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=7.1e-34 Score=312.12 Aligned_cols=272 Identities=22% Similarity=0.338 Sum_probs=195.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|++|.||+|+.+.+++.||+|+++.. .......+.+|++++++++|||++++++++. .++..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLM-----QESRLY 75 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEe-----eCCeEE
Confidence 478889999999999999999989999999998643 2233467789999999999999999999954 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ ++|.+++..... ...+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~ 148 (285)
T cd07861 76 LIFEFLS-MDLKKYLDSLPK---GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLA 148 (285)
T ss_pred EEEecCC-CCHHHHHhcCCC---CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccce
Confidence 9999996 689998876432 12478999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........+++.|+|||.+.. ...++.++|||||||++|||+||++||.......
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~ 209 (285)
T cd07861 149 RAFGIP--------VRVYTHEVVTLWYRAPEVLLG-----------SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID 209 (285)
T ss_pred eecCCC--------cccccCCcccccccChHHhcC-----------CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence 754211 111122356889999976542 2346889999999999999999999987432111
Q ss_pred ccHHHHHHhh--cchhhhhh-cC-ccccc---ccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA--LPEKVMET-VD-PSLLL---AWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~--~~~~~~~~-~d-~~~~~---~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ........ .....+.. .+ +.... .+.............+++.+++.+||..||++|||+.+++.
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 210 Q-LFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred H-HHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0 00000000 00000000 00 00000 00000000111123456789999999999999999999875
No 212
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-33 Score=311.55 Aligned_cols=267 Identities=23% Similarity=0.389 Sum_probs=198.0
Q ss_pred hcCccCCcccccCcceEEEEEECC----------------CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGE----------------NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKI 741 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~----------------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l 741 (997)
++|++.++||+|+||.||++.+.. ++..||+|++... .......+.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 579999999999999999986532 3446899999743 33445788999999999999999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCC-----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 816 (997)
++++. ..+..++||||+++|+|.+++....... ....+++.++..++.|++.|++|||+. +|+||||
T Consensus 85 ~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl 156 (296)
T cd05095 85 LAVCI-----TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDL 156 (296)
T ss_pred EEEEe-----cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccC
Confidence 99854 3457899999999999999998754221 123477889999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 817 KPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
||+||+++.++.+|++|||+++.+..... ........++..|+|||.. .++.++.++|||||
T Consensus 157 kp~Nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~------------~~~~~~~~~DiwSl 218 (296)
T cd05095 157 ATRNCLVGKNYTIKIADFGMSRNLYSGDY------YRIQGRAVLPIRWMSWESI------------LLGKFTTASDVWAF 218 (296)
T ss_pred ChheEEEcCCCCEEeccCcccccccCCcc------eeccCcCcCccccCCHHHH------------hcCCccchhhhhHH
Confidence 99999999999999999999976522111 0111223346789999643 35678999999999
Q ss_pred HHHHHHHHh--CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 897 GVMLLEMFT--RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 897 Gvvl~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
||++|||++ |..||..... .+..... .+..+...... ..+.+..++..+.+++.+||+.||++
T Consensus 219 G~~l~el~~~~~~~p~~~~~~-----~~~~~~~-----~~~~~~~~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~ 283 (296)
T cd05095 219 GVTLWEILTLCKEQPYSQLSD-----EQVIENT-----GEFFRDQGRQV-----YLPKPALCPDSLYKLMLSCWRRNAKE 283 (296)
T ss_pred HHHHHHHHHhCCCCCccccCh-----HHHHHHH-----HHHHhhccccc-----cCCCCCCCCHHHHHHHHHHcCCCccc
Confidence 999999998 6778763211 1111100 00000000000 00111234567889999999999999
Q ss_pred CCCHHHHHHHHH
Q 001908 975 RMEMRDVLAKLC 986 (997)
Q Consensus 975 Rps~~evl~~L~ 986 (997)
||++.|+++.|+
T Consensus 284 Rp~~~~i~~~l~ 295 (296)
T cd05095 284 RPSFQEIHATLL 295 (296)
T ss_pred CCCHHHHHHHHh
Confidence 999999999886
No 213
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=8.4e-34 Score=308.90 Aligned_cols=259 Identities=22% Similarity=0.355 Sum_probs=200.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCC---CcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|.+... ...||+|+..... ....+.+.+|++++++++|+||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 35688899999999999999987543 3468999887544 4456788999999999999999999998642
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++|+|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d 150 (270)
T cd05056 79 NPVWIVMELAPLGELRSYLQVNKY-----SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGD 150 (270)
T ss_pred CCcEEEEEcCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEcc
Confidence 357899999999999999976431 378999999999999999999998 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+++....... .......++..|+|||.+ ....++.++|||||||++||+++ |..||..
T Consensus 151 ~g~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~el~~~g~~pf~~ 211 (270)
T cd05056 151 FGLSRYLEDESY-------YKASKGKLPIKWMAPESI------------NFRRFTSASDVWMFGVCMWEILMLGVKPFQG 211 (270)
T ss_pred Cceeeecccccc-------eecCCCCccccccChhhh------------ccCCCCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 999976532211 111122345689999654 34668899999999999999996 9999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... +...... .... ...+..++.++.+++.+|+..+|++|||+.++++.|.++..+
T Consensus 212 ~~~~-----~~~~~~~-----~~~~------------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 212 VKNN-----DVIGRIE-----NGER------------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred CCHH-----HHHHHHH-----cCCc------------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3211 1111000 0000 011123456788999999999999999999999999998764
No 214
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=5.3e-34 Score=319.03 Aligned_cols=243 Identities=26% Similarity=0.328 Sum_probs=185.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|++..+++.||+|++.... ......+..|.. +++.++|+||+++++++ ...+..++||
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTADKLYFVL 75 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE-----EcCCeEEEEE
Confidence 46999999999999999899999999986422 222334444444 56788999999999884 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+....+..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 76 e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~ 146 (325)
T cd05602 76 DYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 146 (325)
T ss_pred eCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCccc
Confidence 9999999999998654 366778888999999999999999 9999999999999999999999999999753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||++. +..++.++||||+||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~ 201 (325)
T cd05602 147 IE--------HNGTTSTFCGTPEYLAPEVLH------------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN-----T 201 (325)
T ss_pred cc--------CCCCcccccCCccccCHHHHc------------CCCCCCccccccccHHHHHHhcCCCCCCCCC-----H
Confidence 21 111223457999999996654 5678899999999999999999999997421 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.+.......... ... ......+.+++.+|++.||++||++.+.+..
T Consensus 202 ~~~~~~i~~~~~--~~~----------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 202 AEMYDNILNKPL--QLK----------------PNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHhCCc--CCC----------------CCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 121111110000 000 1123456789999999999999998755443
No 215
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=315.86 Aligned_cols=253 Identities=24% Similarity=0.349 Sum_probs=204.0
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch---hhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK---GALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 752 (997)
....|++.+.||+|.||.||+++.+.+|+.+|+|++..... .......+|+++|+++. |||||.+.++ |++
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~-----~e~ 107 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDA-----FED 107 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEE-----EEc
Confidence 34578889999999999999999999999999999974432 24468899999999998 9999999999 556
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC----Cc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MV 828 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~----~~ 828 (997)
....++|||++.||.|.+.+.+. .+++..+..++.||+.|+.|||+. ||+|||+||+|+|+... +.
T Consensus 108 ~~~~~lvmEL~~GGeLfd~i~~~-------~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ 177 (382)
T KOG0032|consen 108 PDSVYLVMELCEGGELFDRIVKK-------HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGR 177 (382)
T ss_pred CCeEEEEEEecCCchHHHHHHHc-------cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCc
Confidence 67999999999999999999886 178889999999999999999998 99999999999999644 47
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+|++|||+|..... .......+||+.|+|||++. +..|+..+||||+||++|.|++|.+
T Consensus 178 ik~~DFGla~~~~~---------~~~~~~~~Gtp~y~APEvl~------------~~~y~~~~DiWS~Gvi~yiLL~G~~ 236 (382)
T KOG0032|consen 178 IKLIDFGLAKFIKP---------GERLHTIVGTPEYVAPEVLG------------GRPYGDEVDVWSIGVILYILLSGVP 236 (382)
T ss_pred EEEeeCCCceEccC---------CceEeeecCCccccCchhhc------------CCCCCcccchhHHHHHHHHHhhCCC
Confidence 99999999987622 34456689999999996664 4789999999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
||........ .... ...+. +..++. | ........+++..|+..||.+|+|+.++++.
T Consensus 237 PF~~~~~~~~-~~~i----~~~~~-~f~~~~----w---------~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 237 PFWGETEFEI-FLAI----LRGDF-DFTSEP----W---------DDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred CCcCCChhHH-HHHH----HcCCC-CCCCCC----c---------cccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 9985432211 1111 11111 111111 1 1223456789999999999999999999873
No 216
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-33 Score=311.70 Aligned_cols=268 Identities=22% Similarity=0.371 Sum_probs=199.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCC----------------cEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENG----------------TFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIK 740 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~----------------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~ 740 (997)
.++|++.++||+|+||.||+|+....+ ..||+|++.... ....+.+.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 357899999999999999999876433 568999987432 345678899999999999999999
Q ss_pred EEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCC-----CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP-----EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 741 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
+++++. ..+..+++|||+++++|.+++....... ....+++..++.++.|++.|++|||+. +|+|||
T Consensus 84 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~d 155 (296)
T cd05051 84 LLGVCT-----VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRD 155 (296)
T ss_pred EEEEEe-----cCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccc
Confidence 999864 3468999999999999999998754211 112478999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHH
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwS 895 (997)
|||+||+++.++.+|++|||.++....... ........++..|+|||.+ .+..++.++||||
T Consensus 156 lkp~Nili~~~~~~~l~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~s 217 (296)
T cd05051 156 LATRNCLVGKNYTIKIADFGMSRNLYSSDY------YRVQGRAPLPIRWMAWESV------------LLGKFTTKSDVWA 217 (296)
T ss_pred cchhceeecCCCceEEccccceeecccCcc------eeecCcCCCCceecCHHHh------------hcCCCCccchhhh
Confidence 999999999999999999999876532211 1112234567889999654 3467889999999
Q ss_pred HHHHHHHHHh--CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCC
Q 001908 896 LGVMLLEMFT--RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI 973 (997)
Q Consensus 896 lGvvl~ellt--g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 973 (997)
|||++|||++ +..||...... ............ .+.... ...+..++.++.+++.+||..||+
T Consensus 218 lG~~l~el~~~~~~~p~~~~~~~--~~~~~~~~~~~~-----~~~~~~--------~~~~~~~~~~l~~li~~cl~~~p~ 282 (296)
T cd05051 218 FGVTLWEILTLCREQPYEHLTDQ--QVIENAGHFFRD-----DGRQIY--------LPRPPNCPKDIYELMLECWRRDEE 282 (296)
T ss_pred hHHHHHHHHhcCCCCCCCCcChH--HHHHHHHhcccc-----cccccc--------CCCccCCCHHHHHHHHHHhccChh
Confidence 9999999998 67777633211 111110000000 000000 001122346789999999999999
Q ss_pred CCCCHHHHHHHHH
Q 001908 974 ERMEMRDVLAKLC 986 (997)
Q Consensus 974 ~Rps~~evl~~L~ 986 (997)
+|||+.|+++.|+
T Consensus 283 ~Rpt~~el~~~L~ 295 (296)
T cd05051 283 DRPTFREIHLFLQ 295 (296)
T ss_pred cCCCHHHHHHHhc
Confidence 9999999999875
No 217
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.5e-33 Score=309.14 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=194.2
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
|+..+.||+|+||+||+|.+..+++.||+|.+.... ....+.+.+|+.++++++|++++++++++. ..+..+
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~-----~~~~~~ 76 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYE-----TKDALC 76 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEe-----cCCEEE
Confidence 677889999999999999999999999999986322 222355678999999999999999998853 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ..+++..+..++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~g~~L~~~l~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~ 149 (285)
T cd05630 77 LVLTLMNGGDLKFHIYHMGE----AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLA 149 (285)
T ss_pred EEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccce
Confidence 99999999999999865432 2478889999999999999999998 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... .......|+..|+|||.+. +..++.++||||+||++|||++|+.||.......
T Consensus 150 ~~~~~~---------~~~~~~~g~~~y~aPE~~~------------~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~ 208 (285)
T cd05630 150 VHVPEG---------QTIKGRVGTVGYMAPEVVK------------NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 208 (285)
T ss_pred eecCCC---------ccccCCCCCccccChHHHc------------CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccc
Confidence 654211 1112346899999996553 5678899999999999999999999997432111
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
..... .... .. .... .+..+..++.+++.+||+.||++||| +.|+++
T Consensus 209 -~~~~~-~~~~-~~----~~~~------------~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 209 -KREEV-ERLV-KE----VQEE------------YSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred -hHHHH-Hhhh-hh----hhhh------------cCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 01111 0000 00 0000 01123456789999999999999999 788876
No 218
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.7e-34 Score=319.71 Aligned_cols=242 Identities=24% Similarity=0.317 Sum_probs=188.5
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 755 (997)
+|+..+.||+|+||+||+|+.+.+++.||+|++... .....+.+..|+++++.+. |++|+++.++ +...+.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~-----~~~~~~ 75 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSC-----FQTVDR 75 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeE-----EecCCE
Confidence 477889999999999999999999999999998743 2334466788999988885 5677788877 344568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++.+++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~~g~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 76 LYFVMEYVNGGDLMYHIQQVG------KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 999999999999999997654 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++..... ........||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 147 ~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslGvil~elltG~~pf~~~~- 205 (323)
T cd05615 147 MCKEHMVD--------GVTTRTFCGTPDYIAPEIIA------------YQPYGKSVDWWAYGVLLYEMLAGQPPFDGED- 205 (323)
T ss_pred cccccCCC--------CccccCccCCccccCHHHHc------------CCCCCCccchhhhHHHHHHHHhCCCCCCCCC-
Confidence 98753211 11123356899999996553 5668899999999999999999999997432
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
............ ... +.....++.+++.+|+..+|++|++.
T Consensus 206 ----~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 206 ----EDELFQSIMEHN------VSY------------PKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred ----HHHHHHHHHhCC------CCC------------CccCCHHHHHHHHHHcccCHhhCCCC
Confidence 111111111000 000 11123456789999999999999985
No 219
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.8e-33 Score=304.68 Aligned_cols=264 Identities=22% Similarity=0.285 Sum_probs=188.8
Q ss_pred CcccccCcceEEEEEECC--CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGE--NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~--~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|+... ....+|+|.+... .......+.+|++.++.++|+||+++++++. ..+..++|||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~-----~~~~~~lv~e 75 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCI-----ESIPYLLVLE 75 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEEC-----CCCceEEEEE
Confidence 368999999999997642 3457888887633 2334567889999999999999999999864 3457899999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++....... ....++...+.++.||+.|++|||++ +|+||||||+||++++++++||+|||++....
T Consensus 76 ~~~~g~L~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~ 151 (269)
T cd05042 76 FCPLGDLKNYLRSNRGMV-AQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQY 151 (269)
T ss_pred eCCCCcHHHHHHhccccc-cccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccc
Confidence 999999999998764321 11246778889999999999999999 99999999999999999999999999986542
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
.... ........++..|+|||++..... ......++.++|||||||++|||++ |..||...... ..+
T Consensus 152 ~~~~------~~~~~~~~~~~~y~aPE~~~~~~~-----~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~ 219 (269)
T cd05042 152 PEDY------YITKDCHAVPLRWLAPELVEIRGQ-----DLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDE-QVL 219 (269)
T ss_pred cchh------eeccCCCCCcccccCHHHHhhccc-----cccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHH-HHH
Confidence 2111 011122345678999998753211 1123567889999999999999999 77887633111 011
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.. ..........++.. ...++..+.+++..|| .||++|||++||++.|.
T Consensus 220 ~~----~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 220 KQ----VVREQDIKLPKPQL------------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred HH----HhhccCccCCCCcc------------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 11 11111111111111 1123456678888999 59999999999998873
No 220
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=4.9e-34 Score=319.30 Aligned_cols=243 Identities=27% Similarity=0.359 Sum_probs=186.1
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||+||+|+.+.+|+.||+|++... .......+..|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~-----~~~~~~~lv~ 75 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF-----QTTEKLYFVL 75 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE-----ecCCEEEEEE
Confidence 4689999999999999999999999998643 2223345555655 46778999999999884 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~ 146 (325)
T cd05604 76 DFVNGGELFFHLQRER------SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (325)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccC
Confidence 9999999999987654 478889999999999999999999 9999999999999999999999999998743
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||++. +..++.++|||||||++|||++|+.||.... .
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslG~il~el~~G~~pf~~~~-----~ 201 (325)
T cd05604 147 IA--------QSDTTTTFCGTPEYLAPEVIR------------KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRD-----V 201 (325)
T ss_pred CC--------CCCCcccccCChhhCCHHHHc------------CCCCCCcCccccccceehhhhcCCCCCCCCC-----H
Confidence 11 111223457999999996653 5678889999999999999999999997431 2
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.+.......... ...+ .....+.+++.+|++.+|++||++++.++.
T Consensus 202 ~~~~~~~~~~~~--~~~~----------------~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 202 AEMYDNILHKPL--VLRP----------------GASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred HHHHHHHHcCCc--cCCC----------------CCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 222111111000 0000 123456789999999999999988644433
No 221
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.2e-33 Score=312.89 Aligned_cols=271 Identities=19% Similarity=0.299 Sum_probs=197.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.++||+|+||.||+|+.+.+++.||+|.++... ......+.+|++++++++|+||+++++++ ..++..+
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~-----~~~~~~~ 80 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII-----HTEKSLT 80 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE-----ecCCeEE
Confidence 57899999999999999999999899999999986432 23345678899999999999999999995 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~ 151 (301)
T cd07873 81 LVFEYLD-KDLKQYLDDCGN-----SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLA 151 (301)
T ss_pred EEEeccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcch
Confidence 9999996 599999876532 377889999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........+++.|+|||.+.. ...++.++|||||||++|||+||++||......
T Consensus 152 ~~~~~~--------~~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~- 211 (301)
T cd07873 152 RAKSIP--------TKTYSNEVVTLWYRPPDILLG-----------STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE- 211 (301)
T ss_pred hccCCC--------CCcccccceeecccCcHHHhC-----------CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 754211 111123356889999986542 234778999999999999999999999743211
Q ss_pred ccHHHHHHhh---cchhhhhhcCcccccc-----cccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA---LPEKVMETVDPSLLLA-----WSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~---~~~~~~~~~d~~~~~~-----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... ....+....+...... +...............+.+++.+|++.||.+|||++|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 212 EQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred HHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0111111100 0001111111000000 0000000111223456789999999999999999999986
No 222
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-33 Score=312.44 Aligned_cols=250 Identities=23% Similarity=0.321 Sum_probs=198.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.+.||+|+||.||+|....+++.||+|.+........+.+.+|+.+++.++|+||+++++++. ..+..++
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL-----VGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCEEEE
Confidence 67999999999999999999998899999999997555555577889999999999999999999854 4558999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++.+.. +++.++..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~ 163 (297)
T cd06656 94 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (297)
T ss_pred eecccCCCCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccce
Confidence 999999999999997643 67889999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......+++.|+|||.+. +..++.++|||||||++|++++|..||.......
T Consensus 164 ~~~~~~--------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~- 222 (297)
T cd06656 164 QITPEQ--------SKRSTMVGTPYWMAPEVVT------------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR- 222 (297)
T ss_pred EccCCc--------cCcCcccCCccccCHHHHc------------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcch-
Confidence 542211 1122346888999996553 5667889999999999999999999996422110
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ... ...+. ...+...+..+.+++.+||..+|++||++.++++
T Consensus 223 ---~~~~-~~~-----~~~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 223 ---ALYL-IAT-----NGTPE----------LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---heee-ecc-----CCCCC----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000 00000 0011223456788999999999999999999987
No 223
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.4e-33 Score=308.79 Aligned_cols=260 Identities=24% Similarity=0.401 Sum_probs=201.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCc----EEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.+|++.+.||+|+||+||+|.++.++. .||+|+..... ......+.+|++++++++|+||++++++|..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS------ 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578899999999999999999875554 58999886443 3345678899999999999999999998753
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++|+|.+++..... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+||+|
T Consensus 81 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~d 152 (279)
T cd05057 81 SQVQLITQLMPLGCLLDYVRNHKD-----NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITD 152 (279)
T ss_pred CceEEEEecCCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECC
Confidence 478999999999999999987542 378999999999999999999998 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||.++....... ........++..|+|||.+ ....++.++|||||||++||+++ |+.||..
T Consensus 153 fg~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 214 (279)
T cd05057 153 FGLAKLLDVDEK------EYHAEGGKVPIKWMALESI------------LHRIYTHKSDVWSYGVTVWELMTFGAKPYEG 214 (279)
T ss_pred CcccccccCccc------ceecCCCcccccccCHHHh------------hcCCcCchhhHHHHHHHHHHHhcCCCCCCCC
Confidence 999986532111 0011122345689999654 34678899999999999999999 9999874
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.. ..++........ ..+.+..+...+.+++.+||..+|++||++.++++.|.++..+.
T Consensus 215 ~~-----~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 215 IP-----AVEIPDLLEKGE-----------------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred CC-----HHHHHHHHhCCC-----------------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 31 111111110000 00011113346789999999999999999999999999986543
No 224
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2e-33 Score=313.70 Aligned_cols=205 Identities=21% Similarity=0.317 Sum_probs=161.0
Q ss_pred CCcccccCcceEEEEEECC--CCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 684 SNMIGQGSFGSVYKGILGE--NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
..+||+|+||+||+|+.+. ++..||+|.+.... ....+.+|++++++++||||+++++++.. ......++|||
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~lv~e 80 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLS---HSDRKVWLLFD 80 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEec---cCCCeEEEEEe
Confidence 3689999999999999753 55789999986432 23467889999999999999999998753 23567899999
Q ss_pred eccCCCHHHHhhcCCC---CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee----CCCCcEEEccc
Q 001908 762 YMQNGSLEEWLHQSNG---QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSDF 834 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~DF 834 (997)
|++ ++|.+++..... ......+++..++.++.|++.||+|||+. +|+||||||+||++ +.++++||+||
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~Df 156 (317)
T cd07867 81 YAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADM 156 (317)
T ss_pred eeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeec
Confidence 985 588888764321 11123478889999999999999999999 99999999999999 56789999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
|+|+....... .........||+.|+|||.+.. ...++.++||||+||++|||+||++||...
T Consensus 157 G~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 157 GFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLG-----------ARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred cceeccCCCcc-----cccccCcceecccccCcHHhcC-----------CCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 99986522111 1112234568999999976542 245788999999999999999999999754
No 225
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.1e-33 Score=309.79 Aligned_cols=250 Identities=24% Similarity=0.355 Sum_probs=198.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.+.||.|+||.||+|....+++.||+|.+........+.+.+|+++++.++|+|++++++++. ..+..++
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFL-----VGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEe-----cCceEEE
Confidence 46889999999999999999998899999999997655555677889999999999999999999854 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|+||+++++|.+++.... +++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~ 163 (296)
T cd06655 94 VMEYLAGGSLTDVVTETC-------MDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCA 163 (296)
T ss_pred EEEecCCCcHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccch
Confidence 999999999999987543 78899999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......++..|+|||.+ .+..++.++|||||||++|+|++|+.||.....
T Consensus 164 ~~~~~~--------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~--- 220 (296)
T cd06655 164 QITPEQ--------SKRSTMVGTPYWMAPEVV------------TRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENP--- 220 (296)
T ss_pred hccccc--------ccCCCcCCCccccCcchh------------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---
Confidence 642211 112234688899999654 356678899999999999999999999864321
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........ ... .+.. ..+...+..+.+++.+||..||++||++.++++
T Consensus 221 -~~~~~~~~-~~~-----~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 221 -LRALYLIA-TNG-----TPEL----------QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -HHHHHHHH-hcC-----Cccc----------CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 11110000 000 0000 011223456788999999999999999999975
No 226
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=1.8e-33 Score=307.76 Aligned_cols=250 Identities=24% Similarity=0.366 Sum_probs=193.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 75 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFV-----ENRIS 75 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE-----CCEEE
Confidence 3678889999999999999999889999999998643 33345678899999999999999999998643 45789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|..+. .+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++
T Consensus 76 lv~e~~~~~~l~~~~----------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~ 142 (279)
T cd06619 76 ICTEFMDGGSLDVYR----------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVS 142 (279)
T ss_pred EEEecCCCCChHHhh----------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcc
Confidence 999999999997652 256778889999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
..... .......||..|+|||.+ .+..++.++|||||||++|+|++|+.||.......
T Consensus 143 ~~~~~----------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~ 200 (279)
T cd06619 143 TQLVN----------SIAKTYVGTNAYMAPERI------------SGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQ 200 (279)
T ss_pred eeccc----------ccccCCCCChhhcCceee------------cCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccc
Confidence 75421 112235689999999654 35678899999999999999999999997533221
Q ss_pred ccH--HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTL--HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... .+... .......+... ......++.+++.+||+.+|++||+++|+++.
T Consensus 201 ~~~~~~~~~~-----~~~~~~~~~~~-----------~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 201 GSLMPLQLLQ-----CIVDEDPPVLP-----------VGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cccchHHHHH-----HHhccCCCCCC-----------CCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111 01000 00000011110 01123467899999999999999999999764
No 227
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=9.4e-34 Score=332.42 Aligned_cols=272 Identities=19% Similarity=0.278 Sum_probs=192.7
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC------CCcceEEeee
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH------RNLIKIITVC 745 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h------~niv~l~~~~ 745 (997)
.++....++|++.++||+|+||+||+|.+..+++.||||+++... ...+.+..|+++++.++| .+++++++++
T Consensus 122 ~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344455688999999999999999999998899999999996432 223455667777777654 4588888875
Q ss_pred eccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC
Q 001908 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH 825 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~ 825 (997)
.. ...+.++|||++ +++|.+++.+.. .+++..+..++.||+.||+|||++. +|+||||||+|||++.
T Consensus 201 ~~----~~~~~~iv~~~~-g~~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~yLH~~~--gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 201 QN----ETGHMCIVMPKY-GPCLLDWIMKHG------PFSHRHLAQIIFQTGVALDYFHTEL--HLMHTDLKPENILMET 267 (467)
T ss_pred Ec----CCceEEEEEecc-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhcC--CeecCCCCHHHEEEec
Confidence 32 345789999998 779999987654 4788999999999999999999732 8999999999999987
Q ss_pred CC----------------cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCc
Q 001908 826 DM----------------VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV 889 (997)
Q Consensus 826 ~~----------------~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~ 889 (997)
++ .+||+|||.+... ........||+.|+|||++ .+..++.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~-----------~~~~~~~~gt~~Y~APE~~------------~~~~~~~ 324 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDE-----------RHSRTAIVSTRHYRSPEVV------------LGLGWMY 324 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccC-----------ccccccccCCccccCcHHh------------hcCCCCc
Confidence 66 4999999987532 1122346799999999655 3567899
Q ss_pred cchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhh---cchhhhh---------hcC----------cccccccccc
Q 001908 890 TGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMA---LPEKVME---------TVD----------PSLLLAWSDG 947 (997)
Q Consensus 890 ~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~---~~~~~~~---------~~d----------~~~~~~~~~~ 947 (997)
++|||||||++|||++|+.||...... .....+... .+..+.. ..+ +.....+...
T Consensus 325 ~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (467)
T PTZ00284 325 STDMWSMGCIIYELYTGKLLYDTHDNL--EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARA 402 (467)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcc
Confidence 999999999999999999999743211 111111110 1111110 000 0000000000
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 948 RRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. .........+.+++..||..||++|||+.|+++
T Consensus 403 ~~-~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~ 437 (467)
T PTZ00284 403 RP-VREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT 437 (467)
T ss_pred cc-hhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence 00 000011345789999999999999999999986
No 228
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.2e-33 Score=309.91 Aligned_cols=270 Identities=23% Similarity=0.345 Sum_probs=205.7
Q ss_pred ChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
+..++......|++.+.||+|+||.||+|+...+++.||+|++.... .....+..|+.+++++ +|+||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 44555566789999999999999999999999899999999986543 2345678899999998 799999999987532
Q ss_pred Cc-CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 749 DF-KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 749 ~~-~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
.. ...+..+++|||+++|+|.+++...... .+++..+..++.|+++|++|||+. +|+||||||+||++++++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~ 158 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGN----ALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENA 158 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCC
Confidence 21 2346789999999999999999865422 367888899999999999999999 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||.+...... ........|+..|+|||.+.. +...+..++.++|||||||++|||++|+
T Consensus 159 ~~~l~dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~l~~-------~~~~~~~~~~~~DvwslG~~l~el~~g~ 223 (282)
T cd06636 159 EVKLVDFGVSAQLDRT--------VGRRNTFIGTPYWMAPEVIAC-------DENPDATYDYRSDIWSLGITAIEMAEGA 223 (282)
T ss_pred CEEEeeCcchhhhhcc--------ccCCCcccccccccCHhhcCc-------ccCcCcCCCcccchhHHHHHHHHHHhCC
Confidence 9999999998754211 111223568899999987642 1122456788999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.||..... ...... ......+.. ....++.++.+++.+||..||.+||++.|+++
T Consensus 224 ~p~~~~~~----~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 224 PPLCDMHP----MRALFL------IPRNPPPKL-----------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CCccccCH----Hhhhhh------HhhCCCCCC-----------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 99864321 111100 000011111 01134567889999999999999999999875
No 229
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.6e-33 Score=307.33 Aligned_cols=267 Identities=23% Similarity=0.329 Sum_probs=205.3
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc-CCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF-KGA 753 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~-~~~ 753 (997)
..+++|++.+.||+|++|.||+|..+.+++.||+|++..... ..+.+.+|+++++++ +|+||+++++++..... ...
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 356789999999999999999999988899999999875443 346789999999999 79999999999765432 335
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++++|.+++...... ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d 156 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKK--GKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVD 156 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECC
Confidence 6789999999999999998753311 12478899999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+...... ........|+..|+|||.+.. +......++.++|||||||++|+|++|+.||...
T Consensus 157 ~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~ 221 (275)
T cd06608 157 FGVSAQLDST--------LGRRNTFIGTPYWMAPEVIAC-------DEQPDASYDARSDVWSLGITAIELADGKPPLCDM 221 (275)
T ss_pred Cccceecccc--------hhhhcCccccccccCHhHhcc-------cccccCCccccccHHHhHHHHHHHHhCCCCcccc
Confidence 9998754211 112233568899999998753 1122456788999999999999999999998632
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ...... . .....+.. ..+..+...+.+++.+||..||++|||+.|+++
T Consensus 222 ~~----~~~~~~-~-----~~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 222 HP----MRALFK-I-----PRNPPPTL----------KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ch----HHHHHH-h-----hccCCCCC----------CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11 111100 0 00001111 112234567889999999999999999999975
No 230
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=9.6e-34 Score=313.81 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=200.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCc----EEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.++|+..+.||+|+||.||+|++..++. .||+|++.... ......+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~----- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS----- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-----
Confidence 4578888999999999999999876665 57888886432 3334578899999999999999999998743
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
...++++||+++|+|.+++..... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 81 -~~~~~v~e~~~~g~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~ 151 (303)
T cd05110 81 -PTIQLVTQLMPHGCLLDYVHEHKD-----NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKIT 151 (303)
T ss_pred -CCceeeehhcCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEc
Confidence 236799999999999999986531 378889999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 911 (997)
|||+++...... .........++..|+|||.+ .+..++.++|||||||++|||++ |+.||.
T Consensus 152 Dfg~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~DiwslG~~l~el~t~g~~p~~ 213 (303)
T cd05110 152 DFGLARLLEGDE------KEYNADGGKMPIKWMALECI------------HYRKFTHQSDVWSYGVTIWELMTFGGKPYD 213 (303)
T ss_pred cccccccccCcc------cccccCCCccccccCCHHHh------------ccCCCChHHHHHHHHHHHHHHHhCCCCCCC
Confidence 999998652211 00111223456789999654 35678899999999999999998 889986
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... ....++.... .. .+.+..++..+.+++..||..+|++||++.++++.+.++..+
T Consensus 214 ~~~~--~~~~~~~~~~----------~~----------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 214 GIPT--REIPDLLEKG----------ER----------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred CCCH--HHHHHHHHCC----------CC----------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3211 1111111100 00 000112345678999999999999999999999999998765
Q ss_pred hh
Q 001908 992 LV 993 (997)
Q Consensus 992 ~~ 993 (997)
..
T Consensus 272 ~~ 273 (303)
T cd05110 272 PQ 273 (303)
T ss_pred hh
Confidence 43
No 231
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.4e-33 Score=316.49 Aligned_cols=261 Identities=24% Similarity=0.273 Sum_probs=194.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.++||+|+||+||+++.+.+++.||+|++... .......+.+|+.++..++|++|+++++++ .+.+.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF-----QDENN 75 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE-----ecCCE
Confidence 4788999999999999999999989999999998632 223345678899999999999999999884 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~ey~~~g~L~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred EEEEEeccCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 9999999999999999986431 378888999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++....... ........||+.|+|||++.... .....++.++|||||||++|||++|+.||...
T Consensus 148 ~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~-- 211 (332)
T cd05623 148 SCLKLMEDG-------TVQSSVAVGTPDYISPEILQAME-------DGKGKYGPECDWWSLGVCMYEMLYGETPFYAE-- 211 (332)
T ss_pred hheecccCC-------cceecccccCccccCHHHHhccc-------cCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCC--
Confidence 987542211 11122357999999998875321 11345788999999999999999999999732
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCC--CCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI--ERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~--~Rps~~evl~~ 984 (997)
...+.............. + .....+..++.+++.+|+..+++ .|+++.|+++.
T Consensus 212 ---~~~~~~~~i~~~~~~~~~-p------------~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 212 ---SLVETYGKIMNHKERFQF-P------------AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ---CHHHHHHHHhCCCccccC-C------------CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 121211111100000000 0 00112345667888888765444 37889888764
No 232
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1.2e-33 Score=305.82 Aligned_cols=254 Identities=28% Similarity=0.436 Sum_probs=196.4
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccchhh--HHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--LKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.+.||+|+||+||+++...+++.||+|++....... .....+|+.++++++||||+++++++.. ....++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~~ 75 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD-----DNYLYI 75 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----SSEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----cccccc
Confidence 567899999999999999999999999999997554332 2234569999999999999999999543 568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+|+||||+||++++++.++|+|||.+.
T Consensus 76 v~~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~ 146 (260)
T PF00069_consen 76 VMEYCPGGSLQDYLQKNK------PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSV 146 (260)
T ss_dssp EEEEETTEBHHHHHHHHS------SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTE
T ss_pred cccccccccccccccccc------cccccccccccccccccccccccc---ccccccccccccccccccccccccccccc
Confidence 999999999999998433 478999999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
... ..........++..|+|||.+. .+..++.++||||+|+++|+|++|..||.... ..
T Consensus 147 ~~~--------~~~~~~~~~~~~~~y~aPE~~~-----------~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~--~~ 205 (260)
T PF00069_consen 147 KLS--------ENNENFNPFVGTPEYMAPEVLQ-----------QGKKYTRKSDIWSLGIILYELLTGKLPFEESN--SD 205 (260)
T ss_dssp EST--------STTSEBSSSSSSGGGSCHHHHT-----------TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS--HH
T ss_pred ccc--------cccccccccccccccccccccc-----------cccccccccccccccccccccccccccccccc--ch
Confidence 530 1122333457899999997654 15678999999999999999999999988441 00
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
................... ........+.+++..||+.||++||++.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 206 DQLEIIEKILKRPLPSSSQ--------------QSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHHHHTHHHHHTT--------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred hhhhhhhhccccccccccc--------------ccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1111111111001100000 00011267889999999999999999999875
No 233
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.6e-34 Score=322.19 Aligned_cols=239 Identities=23% Similarity=0.315 Sum_probs=186.6
Q ss_pred CcccccCcceEEEEEE---CCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 685 NMIGQGSFGSVYKGIL---GENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~---~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
+.||+|+||.||+++. +.+++.||+|+++... ......+.+|++++++++||||+++++++ ...+..|+|
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-----~~~~~~~lv 76 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF-----QTEGKLYLI 76 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE-----EcCCEEEEE
Confidence 5799999999999876 3578999999997432 22335667899999999999999999984 445689999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
|||+++|+|.+++.+.. .+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 77 ~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 147 (318)
T cd05582 77 LDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKE 147 (318)
T ss_pred EcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcc
Confidence 99999999999997653 478899999999999999999999 999999999999999999999999999875
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
.... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 148 ~~~~--------~~~~~~~~g~~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~tg~~p~~~~~----- 202 (318)
T cd05582 148 SIDH--------EKKAYSFCGTVEYMAPEVVN------------RRGHTQSADWWSFGVLMFEMLTGSLPFQGKD----- 202 (318)
T ss_pred cCCC--------CCceecccCChhhcCHHHHc------------CCCCCCccceeccceEeeeeccCCCCCCCCC-----
Confidence 4211 11223457899999997654 4567889999999999999999999987321
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
..+.......... . .+......+.+++.+||+.||++||++.+
T Consensus 203 ~~~~~~~i~~~~~------~------------~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 203 RKETMTMILKAKL------G------------MPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHHHHHcCCC------C------------CCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1111111110000 0 01122456779999999999999999554
No 234
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=3e-34 Score=310.09 Aligned_cols=241 Identities=24% Similarity=0.403 Sum_probs=185.1
Q ss_pred CcccccCcceEEEEEECCCCc-------EEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 685 NMIGQGSFGSVYKGILGENGT-------FVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~-------~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.||+|+||.||+|..+..+. +||+|++........+.+.+|+.+++.++||||+++++++.. ++..+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-----~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVC-----GDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEe-----CCCcE
Confidence 469999999999999865443 488888865555556788899999999999999999999643 45789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc--------E
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--------A 829 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~--------~ 829 (997)
+||||+++|+|.++++.... .+++..++.++.||+.|++|||++ +|+||||||+||+++.++. +
T Consensus 76 lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~ 147 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKN-----LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFI 147 (258)
T ss_pred EEEecCCCCcHHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceE
Confidence 99999999999999987542 478889999999999999999999 9999999999999987765 6
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC-C
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR-R 908 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~-~ 908 (997)
|++|||.+..... .....++..|+|||++.. ...++.++|||||||++|||++|. .
T Consensus 148 ~l~d~g~~~~~~~------------~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~~l~~l~~g~~~ 204 (258)
T cd05078 148 KLSDPGISITVLP------------KEILLERIPWVPPECIEN-----------PQNLSLAADKWSFGTTLWEIFSGGDK 204 (258)
T ss_pred EecccccccccCC------------chhccccCCccCchhccC-----------CCCCCchhhHHHHHHHHHHHHcCCCC
Confidence 9999998865421 122457889999976542 234788999999999999999985 5
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
||.... ...... .... .... +.....++.+++.+||+.+|++|||++++++.|
T Consensus 205 ~~~~~~-----~~~~~~-~~~~------~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 205 PLSALD-----SQKKLQ-FYED------RHQL------------PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred Chhhcc-----HHHHHH-HHHc------cccC------------CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 544211 000000 0000 0000 001134678999999999999999999999986
No 235
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1e-33 Score=316.32 Aligned_cols=238 Identities=26% Similarity=0.340 Sum_probs=183.1
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|+...+++.||+|++.... ......+.+|.. +++.++||||+++++++ ...+..++||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~-----~~~~~~~lv~ 75 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF-----QTAEKLYFVL 75 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCEEEEEE
Confidence 46999999999999999899999999986322 223344555554 57889999999999884 4456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .++...+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~ 146 (321)
T cd05603 76 DYVNGGELFFHLQRER------CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEG 146 (321)
T ss_pred cCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccC
Confidence 9999999999887643 367788899999999999999999 9999999999999999999999999998743
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||... +.
T Consensus 147 ~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~ 201 (321)
T cd05603 147 VEP--------EETTSTFCGTPEYLAPEVLR------------KEPYDRTVDWWCLGAVLYEMLYGLPPFYSR-----DV 201 (321)
T ss_pred CCC--------CCccccccCCcccCCHHHhc------------CCCCCCcCcccccchhhhhhhcCCCCCCCC-----CH
Confidence 111 11223457899999996653 466888999999999999999999999742 12
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
.+.......... . .+.....++.+++.+|++.||++||++.
T Consensus 202 ~~~~~~i~~~~~------~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 202 SQMYDNILHKPL------Q------------LPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHHHHhcCCC------C------------CCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 222111111000 0 0011234677999999999999999864
No 236
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2.1e-33 Score=308.57 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=199.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||.||+|.+..+++.||+|.++.. .......+.+|++++++++|+||+++++++ ...+..+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF-----FIEGAVY 75 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe-----ecCCeEE
Confidence 3688899999999999999999989999999988643 334456788999999999999999999984 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ...+++..+..++.|++.|+.|||+++ +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg~~ 150 (286)
T cd06622 76 MCMEYMDAGSLDKLYAGGVA---TEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFGVS 150 (286)
T ss_pred EEEeecCCCCHHHHHHhccc---cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecCCc
Confidence 99999999999999876421 124789999999999999999999743 8999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ......+++.|+|||.+.... ......++.++|||||||++|||++|+.||......
T Consensus 151 ~~~~~~----------~~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 213 (286)
T cd06622 151 GNLVAS----------LAKTNIGCQSYMAPERIKSGG------PNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA- 213 (286)
T ss_pred ccccCC----------ccccCCCccCccCcchhcCCC------CCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh-
Confidence 754211 112245788999998775321 112345688999999999999999999998643111
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.......... ....+. .+..+..++.+++.+||..+|++||++.+++..
T Consensus 214 -~~~~~~~~~~-----~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 214 -NIFAQLSAIV-----DGDPPT------------LPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred -hHHHHHHHHh-----hcCCCC------------CCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111100000 000011 112245667899999999999999999999873
No 237
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-33 Score=303.61 Aligned_cols=247 Identities=26% Similarity=0.388 Sum_probs=190.5
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++||||++++++|.. .+..++||||+
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~lv~e~~ 74 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQ-----RQPIYIVMELV 74 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec-----CCccEEEEECC
Confidence 46899999999999976 68899999987443 3334578899999999999999999998643 45789999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++..... .+++..++.++.|++.|+.|+|+. +++||||||+||+++.++.+|++|||++......
T Consensus 75 ~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (250)
T cd05085 75 PGGDFLSFLRKKKD-----ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDG 146 (250)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceecccc
Confidence 99999999876432 378899999999999999999999 9999999999999999999999999998653211
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHE 922 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~ 922 (997)
. ........++..|+|||.+ .+..++.++|||||||++||+++ |..||..... ..
T Consensus 147 ~-------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-----~~ 202 (250)
T cd05085 147 I-------YSSSGLKQIPIKWTAPEAL------------NYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-----QQ 202 (250)
T ss_pred c-------cccCCCCCCcccccCHHHh------------ccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-----HH
Confidence 1 0111122346679999654 35668889999999999999998 9999864311 11
Q ss_pred HHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 923 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
...... ...... .+..++.++.+++.+||..+|++||++.|+++.|.
T Consensus 203 ~~~~~~-----~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 203 AREQVE-----KGYRMS------------CPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHH-----cCCCCC------------CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 111000 000000 01123567889999999999999999999999875
No 238
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=1.9e-33 Score=306.57 Aligned_cols=240 Identities=23% Similarity=0.376 Sum_probs=183.0
Q ss_pred cccccCcceEEEEEECCC------------------------CcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceE
Q 001908 686 MIGQGSFGSVYKGILGEN------------------------GTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKI 741 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~------------------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l 741 (997)
.||+|+||.||+|....+ ...||+|++..........+.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 699999999999985321 23589999875555555678899999999999999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCe
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 821 (997)
+++|.. ....++||||+++|+|..++..... .+++..+.+++.||++||+|||++ +|+||||||+||
T Consensus 82 ~~~~~~-----~~~~~lv~ey~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Ni 148 (274)
T cd05076 82 HGVCVR-----GSENIMVEEFVEHGPLDVCLRKEKG-----RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNI 148 (274)
T ss_pred EEEEEe-----CCceEEEEecCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccE
Confidence 999754 4478999999999999999976432 377888999999999999999999 999999999999
Q ss_pred eeCCCC-------cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhH
Q 001908 822 LLDHDM-------VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894 (997)
Q Consensus 822 ll~~~~-------~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dvw 894 (997)
+++..+ .+|++|||.+..... .....++..|+|||.+.. ...++.++|||
T Consensus 149 ll~~~~~~~~~~~~~kl~d~g~~~~~~~------------~~~~~~~~~~~aPe~~~~-----------~~~~~~~~Dv~ 205 (274)
T cd05076 149 LLARLGLAEGTSPFIKLSDPGVSFTALS------------REERVERIPWIAPECVPG-----------GNSLSTAADKW 205 (274)
T ss_pred EEeccCcccCccceeeecCCcccccccc------------ccccccCCcccCchhhcC-----------CCCCCcHHHHH
Confidence 998654 489999998864311 112346788999976532 24578999999
Q ss_pred HHHHHHHHHH-hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCC
Q 001908 895 SLGVMLLEMF-TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPI 973 (997)
Q Consensus 895 SlGvvl~ell-tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 973 (997)
||||++||++ +|+.||....... ...+... ..... ......+.+++.+||+.+|+
T Consensus 206 slG~~l~el~~~g~~p~~~~~~~~--~~~~~~~----------~~~~~------------~~~~~~~~~li~~cl~~~p~ 261 (274)
T cd05076 206 SFGTTLLEICFDGEVPLKERTPSE--KERFYEK----------KHRLP------------EPSCKELATLISQCLTYEPT 261 (274)
T ss_pred HHHHHHHHHHhCCCCCccccChHH--HHHHHHh----------ccCCC------------CCCChHHHHHHHHHcccChh
Confidence 9999999985 6899986432111 1111000 00000 01123578999999999999
Q ss_pred CCCCHHHHHHHH
Q 001908 974 ERMEMRDVLAKL 985 (997)
Q Consensus 974 ~Rps~~evl~~L 985 (997)
+|||+.++++.|
T Consensus 262 ~Rps~~~il~~L 273 (274)
T cd05076 262 QRPSFRTILRDL 273 (274)
T ss_pred hCcCHHHHHHhh
Confidence 999999999887
No 239
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=6.3e-34 Score=341.57 Aligned_cols=263 Identities=20% Similarity=0.297 Sum_probs=200.5
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
+...++|.+.+.||+|+||+||+|++..++..||+|++... .......+..|+.++++++||||+++++++.. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d---e~ 85 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN---KA 85 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe---cC
Confidence 34557899999999999999999999999999999998642 33445778999999999999999999998643 23
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCC----CCcEecCCCCCCeeeCC---
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQ----PPIVHGDLKPSNVLLDH--- 825 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~----~~ivHrDlk~~NIll~~--- 825 (997)
....|+||||+++|+|.+++...... ...+++..++.|+.||+.||+|||+... .+|+||||||+|||++.
T Consensus 86 ~~~lyIVMEY~~gGSL~~lL~k~~~~--~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~ 163 (1021)
T PTZ00266 86 NQKLYILMEFCDAGDLSRNIQKCYKM--FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIR 163 (1021)
T ss_pred CCEEEEEEeCCCCCcHHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcc
Confidence 45789999999999999999864211 1248899999999999999999998521 25999999999999964
Q ss_pred --------------CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 826 --------------DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 826 --------------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
.+.+||+|||++...... .......||+.|+|||++.. ....++.++
T Consensus 164 ~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~---------s~~~s~vGTp~YmAPEvL~g----------e~~~~s~KS 224 (1021)
T PTZ00266 164 HIGKITAQANNLNGRPIAKIGDFGLSKNIGIE---------SMAHSCVGTPYYWSPELLLH----------ETKSYDDKS 224 (1021)
T ss_pred ccccccccccccCCCCceEEccCCcccccccc---------ccccccCCCccccCHHHHhc----------cCCCCCchh
Confidence 345999999999764211 11223568999999987642 124578899
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|||||||++|||+||..||.... ........... . +... ....+.++.++|..||..+
T Consensus 225 DVWSLG~ILYELLTGk~PF~~~~----~~~qli~~lk~-----~--p~lp-----------i~~~S~eL~dLI~~~L~~d 282 (1021)
T PTZ00266 225 DMWALGCIIYELCSGKTPFHKAN----NFSQLISELKR-----G--PDLP-----------IKGKSKELNILIKNLLNLS 282 (1021)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCC----cHHHHHHHHhc-----C--CCCC-----------cCCCCHHHHHHHHHHhcCC
Confidence 99999999999999999996321 22222111100 0 0000 0012456789999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|.+||++.|+++
T Consensus 283 PeeRPSa~QlL~ 294 (1021)
T PTZ00266 283 AKERPSALQCLG 294 (1021)
T ss_pred hhHCcCHHHHhc
Confidence 999999999984
No 240
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=2.4e-34 Score=335.91 Aligned_cols=268 Identities=22% Similarity=0.341 Sum_probs=193.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-------
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID------- 749 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 749 (997)
..+|+..+.||+||||.||+++.+-+|+.||||++... +......+.+|+..+++++|||||+++..+.+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 35677889999999999999999999999999999743 4445678899999999999999999984432211
Q ss_pred ------------------------------------------------------c------------------------C
Q 001908 750 ------------------------------------------------------F------------------------K 751 (997)
Q Consensus 750 ------------------------------------------------------~------------------------~ 751 (997)
+ +
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence 0 0
Q ss_pred ---------------------CC--------ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHH
Q 001908 752 ---------------------GA--------DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY 802 (997)
Q Consensus 752 ---------------------~~--------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~y 802 (997)
.+ ...||-||||+..++++++.++... -.....++++++|++|++|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-----~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-----SQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-----hhhHHHHHHHHHHHHHHHH
Confidence 00 2468899999998888888776411 1356789999999999999
Q ss_pred HhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhccc---------C-CCCCccccccccccccccccccCCcchhc
Q 001908 803 LHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA---------R-PFDTSMETQSSSIGIKGTVGYVPPGNIAK 872 (997)
Q Consensus 803 LH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~---------~-~~~~~~~~~~~~~~~~gt~~y~aPE~l~~ 872 (997)
+|++ |||||||||.|||+++++.|||+|||+|+.... . ............+..+||.-|+|||++..
T Consensus 713 IH~~---giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~ 789 (1351)
T KOG1035|consen 713 IHDQ---GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD 789 (1351)
T ss_pred HHhC---ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence 9999 999999999999999999999999999998421 0 00111122234566789999999999875
Q ss_pred ccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhh
Q 001908 873 MLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAK 952 (997)
Q Consensus 873 ~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 952 (997)
.. ...|+.|+||||+|||+|||+. ||...++.-..+.......+|.. ....++.
T Consensus 790 ~~---------~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~------------- 843 (1351)
T KOG1035|consen 790 TS---------SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPE------------- 843 (1351)
T ss_pred cc---------cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-ccccccc-------------
Confidence 32 2579999999999999999985 56532211111111100001111 0111111
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 953 VEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 953 ~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+.=.++|.+++++||++||||.|++.
T Consensus 844 ----~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 844 ----HPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred ----chHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 112247999999999999999999975
No 241
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.1e-33 Score=313.21 Aligned_cols=266 Identities=25% Similarity=0.398 Sum_probs=201.9
Q ss_pred HhhcCccCCcccccCcceEEEEEECC-------CCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeec
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSS 747 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 747 (997)
...+|++.+.||+|+||.||+|++.. .+..||+|+++.. .....+.+.+|+++++++ +|+||++++++|.
T Consensus 10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~- 88 (334)
T cd05100 10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT- 88 (334)
T ss_pred CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc-
Confidence 34578999999999999999998642 2236899988743 234457889999999999 7999999999864
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
..+..++++||+++|+|.+++.+.... .....+++.++++++.|++.|++|||++ +|+|||||
T Consensus 89 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlk 161 (334)
T cd05100 89 ----QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLA 161 (334)
T ss_pred ----cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---Ceeccccc
Confidence 345789999999999999999865321 1123478899999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 818 ~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
|+||+++.++.+||+|||.++....... ........++..|+|||++ .+..++.++||||||
T Consensus 162 p~Nill~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG 223 (334)
T cd05100 162 ARNVLVTEDNVMKIADFGLARDVHNIDY------YKKTTNGRLPVKWMAPEAL------------FDRVYTHQSDVWSFG 223 (334)
T ss_pred cceEEEcCCCcEEECCcccceecccccc------cccccCCCcCceEcCHHHh------------ccCCcCchhhhHHHH
Confidence 9999999999999999999976522110 0111223345679999654 356788899999999
Q ss_pred HHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 898 VMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 898 vvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
|++|||++ |..||... ...+........... ..+..++.++.+++.+||+.+|++||
T Consensus 224 ~il~el~~~g~~p~~~~-----~~~~~~~~~~~~~~~-----------------~~~~~~~~~l~~li~~cl~~~p~~Rp 281 (334)
T cd05100 224 VLLWEIFTLGGSPYPGI-----PVEELFKLLKEGHRM-----------------DKPANCTHELYMIMRECWHAVPSQRP 281 (334)
T ss_pred HHHHHHHhcCCCCCCCC-----CHHHHHHHHHcCCCC-----------------CCCCCCCHHHHHHHHHHcccChhhCc
Confidence 99999999 88887632 222222211110000 01112345788999999999999999
Q ss_pred CHHHHHHHHHHHHH
Q 001908 977 EMRDVLAKLCAARQ 990 (997)
Q Consensus 977 s~~evl~~L~~~~~ 990 (997)
++.|+++.|.++..
T Consensus 282 s~~ell~~l~~~~~ 295 (334)
T cd05100 282 TFKQLVEDLDRVLT 295 (334)
T ss_pred CHHHHHHHHHHHhh
Confidence 99999999998873
No 242
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=2.5e-33 Score=304.88 Aligned_cols=261 Identities=23% Similarity=0.321 Sum_probs=199.0
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++.+++.+.....||+|+||.||+|++..++..||+|.+........+.+.+|++++++++|+||+++++++. ..
T Consensus 3 ~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~ 77 (268)
T cd06624 3 YEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDS-----EN 77 (268)
T ss_pred cccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeec-----cC
Confidence 3455667777789999999999999998889999999987665556678899999999999999999999854 35
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVS 832 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~ 832 (997)
+..++|+||+++++|.+++...... ...+...+..++.|++.|++|||++ +|+||||||+||+++. ++.+||+
T Consensus 78 ~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~ 151 (268)
T cd06624 78 GFFKIFMEQVPGGSLSALLRSKWGP---LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKIS 151 (268)
T ss_pred CEEEEEEecCCCCCHHHHHHHhccc---CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEe
Confidence 6899999999999999999864311 1126778889999999999999999 9999999999999986 6799999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+...... ........|++.|+|||.+... ...++.++|||||||++|+|++|+.||..
T Consensus 152 dfg~~~~~~~~--------~~~~~~~~~~~~~~aPE~~~~~----------~~~~~~~~Dv~slGvvl~~l~~g~~p~~~ 213 (268)
T cd06624 152 DFGTSKRLAGI--------NPCTETFTGTLQYMAPEVIDKG----------PRGYGAPADIWSLGCTIVEMATGKPPFIE 213 (268)
T ss_pred cchhheecccC--------CCccccCCCCccccChhhhccc----------cccCCchhhhHHHHHHHHHHHhCCCCCcc
Confidence 99998754211 1112224578999999766421 12367899999999999999999999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... ...+ ... . ....+. .+..+.+++.+++.+||..+|++|||+.|++.
T Consensus 214 ~~~~~--~~~~-~~~----~-~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 214 LGEPQ--AAMF-KVG----M-FKIHPE------------IPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred ccChh--hhHh-hhh----h-hccCCC------------CCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 31111 0000 000 0 000000 11233456789999999999999999999875
No 243
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7e-33 Score=301.21 Aligned_cols=263 Identities=22% Similarity=0.326 Sum_probs=188.3
Q ss_pred CcccccCcceEEEEEECCCC--cEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENG--TFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.||+|+||.||+|.....+ ..+++|.+.... ....+.+.+|++.++.++||||++++++|. .....++|||
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~-----~~~~~~lv~e 75 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCV-----EAIPYLLVFE 75 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEec-----CCCccEEEEe
Confidence 36999999999999764222 346677765432 344578899999999999999999999864 3457899999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
|+++|+|.+++++.... ....+...++.++.||+.||+|||+. +++||||||+||+++.++.+||+|||++....
T Consensus 76 ~~~~~~L~~~l~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~ 150 (268)
T cd05086 76 YCELGDLKSYLSQEQWH--RRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRY 150 (268)
T ss_pred cCCCCcHHHHHHhhhcc--cccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccC
Confidence 99999999999875321 12356777889999999999999999 99999999999999999999999999986431
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
... .........++..|+|||++..... ......++.++|||||||++|||++ |..||.... .
T Consensus 151 ~~~------~~~~~~~~~~~~~y~aPE~~~~~~~-----~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~-----~ 214 (268)
T cd05086 151 KED------YIETEDDKCVPLRWLAPELVGEFHG-----GLITAEQTKPSNVWALGVTLWELFENAAQPYSHLS-----D 214 (268)
T ss_pred cch------hhhcccCCcCcccccCchhcccccC-----ccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCC-----H
Confidence 111 0111223467889999987753110 1123456789999999999999997 566775321 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.+..............++..... ....+.+++..|| .+|++||+++|+++.|.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 215 REVLNHVIKDQQVKLFKPQLELP------------YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred HHHHHHHHhhcccccCCCccCCC------------CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 11211111122222233332211 2345678889999 67999999999998874
No 244
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-33 Score=321.08 Aligned_cols=274 Identities=20% Similarity=0.195 Sum_probs=197.5
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~ 753 (997)
..++|++.+.||+|+||.||+|.+..+++.||||++... .......+.+|+.+++.++||||+++++++.... +...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 457899999999999999999999989999999998642 2334567889999999999999999999864322 2233
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...|+||||++ +++.+++.. .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~D 169 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILD 169 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHHh--------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEe
Confidence 46899999995 478887753 267888999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 170 fG~a~~~~~---------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwSlG~il~ell~g~~pf~~~ 228 (364)
T cd07875 170 FGLARTAGT---------SFMMTPYVVTRYYRAPEVIL------------GMGYKENVDIWSVGCIMGEMIKGGVLFPGT 228 (364)
T ss_pred CCCccccCC---------CCcccCCcccCCcCCHHHHh------------CCCCCchhhHHhHHHHHHHHHhCCCCCCCC
Confidence 999975421 11123356899999996653 567889999999999999999999999743
Q ss_pred cCCCccHHHHHHhhc--chhhhhhcCccc----------ccc-----cccch---hhhhHHHHHHHHHHHHhhcCCCCCC
Q 001908 914 FQGGLTLHEFCKMAL--PEKVMETVDPSL----------LLA-----WSDGR---RRAKVEECLVTVIRIGVACSMESPI 973 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~--~~~~~~~~d~~~----------~~~-----~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~ 973 (997)
... ..+........ .........+.. ... +.+.. ..........++.+++.+|+..||+
T Consensus 229 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~ 307 (364)
T cd07875 229 DHI-DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307 (364)
T ss_pred CHH-HHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcc
Confidence 211 11111111000 000101110000 000 00000 0000011234678999999999999
Q ss_pred CCCCHHHHHHH
Q 001908 974 ERMEMRDVLAK 984 (997)
Q Consensus 974 ~Rps~~evl~~ 984 (997)
+|||+.|+++.
T Consensus 308 ~R~t~~e~L~h 318 (364)
T cd07875 308 KRISVDEALQH 318 (364)
T ss_pred cCCCHHHHhcC
Confidence 99999999763
No 245
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=2.7e-33 Score=306.11 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=198.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
..|+..+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|++++++++|+||+++++++. +....+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 78 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KGTKLW 78 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----ECCEEE
Confidence 4577889999999999999999888999999998743 2445678899999999999999999999854 355899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++.... +++.++..++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||.+
T Consensus 79 lv~e~~~~~~L~~~i~~~~-------l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~ 148 (277)
T cd06640 79 IIMEYLGGGSALDLLRAGP-------FDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEecCCCCcHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccc
Confidence 9999999999999987532 67888999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... .......++..|+|||.+ .+..++.++|||||||++|||+||..||......
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~apE~~------------~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~- 207 (277)
T cd06640 149 GQLTDTQ--------IKRNTFVGTPFWMAPEVI------------QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPM- 207 (277)
T ss_pred eeccCCc--------cccccccCcccccCHhHh------------ccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChH-
Confidence 7652211 112234578899999654 3566889999999999999999999998743211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.... ..... ........++..+.+++.+||+.+|++||++.|+++.
T Consensus 208 ----~~~~---------~~~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 208 ----RVLF---------LIPKN--------NPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ----hHhh---------hhhcC--------CCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 0000 00000 0011223456778899999999999999999999765
No 246
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=2.8e-33 Score=313.53 Aligned_cols=277 Identities=17% Similarity=0.184 Sum_probs=195.3
Q ss_pred cCCccccc--CcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 683 SSNMIGQG--SFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 683 ~~~~lg~G--~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+.++||+| +|++||+++.+.+|+.||+|+++.. .....+.+.+|+++++.++||||+++++++. .++..++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~-----~~~~~~l 76 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----ADNELWV 76 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE-----ECCEEEE
Confidence 45789999 6789999999999999999999743 2334567788999999999999999999964 3558999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++|+|.+++...... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.++++||+.+.
T Consensus 77 v~e~~~~~~l~~~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~ 149 (327)
T cd08227 77 VTSFMAYGSAKDLICTHFMD----GMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 149 (327)
T ss_pred EEeccCCCcHHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhh
Confidence 99999999999999764311 378899999999999999999999 99999999999999999999999998765
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.......... ..........++..|+|||++... ...++.++|||||||++|||++|+.||........
T Consensus 150 ~~~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~ 218 (327)
T cd08227 150 SMINHGQRLR-VVHDFPKYSVKVLPWLSPEVLQQN----------LQGYDAKSDIYSVGITACELANGHVPFKDMPATQM 218 (327)
T ss_pred cccccccccc-ccccccccccceecccChHHhhcc----------cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH
Confidence 4422111000 001111223567889999776421 13578999999999999999999999975432211
Q ss_pred cHHHHHHhhcchhh------hh---------hcCcccccc---------cccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 919 TLHEFCKMALPEKV------ME---------TVDPSLLLA---------WSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 919 ~~~~~~~~~~~~~~------~~---------~~d~~~~~~---------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
.... .....+... .+ ..+...... .......+......+++.+++.+||+.||++
T Consensus 219 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 297 (327)
T cd08227 219 LLEK-LNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDA 297 (327)
T ss_pred HHHH-hcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchh
Confidence 1111 000000000 00 000000000 0000001112234567889999999999999
Q ss_pred CCCHHHHHH
Q 001908 975 RMEMRDVLA 983 (997)
Q Consensus 975 Rps~~evl~ 983 (997)
|||++|+++
T Consensus 298 Rpt~~ell~ 306 (327)
T cd08227 298 RPSASTLLN 306 (327)
T ss_pred cCCHHHHhc
Confidence 999999976
No 247
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=7.3e-34 Score=318.73 Aligned_cols=242 Identities=23% Similarity=0.275 Sum_probs=183.0
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc---CCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT---RHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
||+|+||+||+|+.+.+++.||||++.... ......+..|..++... +||||+++++++ ......++||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~-----~~~~~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF-----QTDSDLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE-----ecCCeEEEEE
Confidence 699999999999999899999999986321 22334556677777665 699999999884 4556899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..+..++.||++|++|||++ +|+||||||+||+++.++.+||+|||+++..
T Consensus 76 e~~~~g~L~~~l~~~~------~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~ 146 (330)
T cd05586 76 DYMSGGELFWHLQKEG------RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKAN 146 (330)
T ss_pred cCCCCChHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCC
Confidence 9999999999987654 478889999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .........||+.|+|||++.. ...++.++||||+||++|||++|+.||... ..
T Consensus 147 ~~--------~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DvwslGvil~elltG~~Pf~~~-----~~ 202 (330)
T cd05586 147 LT--------DNKTTNTFCGTTEYLAPEVLLD-----------EKGYTKHVDFWSLGVLVFEMCCGWSPFYAE-----DT 202 (330)
T ss_pred CC--------CCCCccCccCCccccCHHHHcC-----------CCCCCCccceeccccEEEEeccCCCCCCCC-----CH
Confidence 21 1112234579999999976642 234788999999999999999999998642 12
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC----HHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME----MRDVLA 983 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps----~~evl~ 983 (997)
.+......... ..... .....++.+++.+||+.||++||+ +.|+++
T Consensus 203 ~~~~~~i~~~~------~~~~~-----------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 203 QQMYRNIAFGK------VRFPK-----------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHHHcCC------CCCCC-----------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 22111111000 00000 012345678999999999999995 555543
No 248
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.6e-33 Score=302.33 Aligned_cols=250 Identities=25% Similarity=0.373 Sum_probs=198.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|+..+.||+|+||.||+|..+.+++.||+|.+..... .+.+.+|++++++++|+||+++++++. .....++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~l 75 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYF-----KNTDLWI 75 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeee-----cCCcEEE
Confidence 578999999999999999999998899999999875433 578999999999999999999999854 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
++||+++++|.+++.... ..+++..++.++.|+++|+.|||+. +++||||+|+||+++.++.+||+|||++.
T Consensus 76 ~~e~~~~~~L~~~l~~~~-----~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~ 147 (256)
T cd06612 76 VMEYCGAGSVSDIMKITN-----KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSG 147 (256)
T ss_pred EEecCCCCcHHHHHHhCc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccch
Confidence 999999999999997643 2478999999999999999999999 99999999999999999999999999998
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......++..|+|||.+. +..++.++|||||||++|+|++|+.||.......
T Consensus 148 ~~~~~~--------~~~~~~~~~~~y~~PE~~~------------~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~- 206 (256)
T cd06612 148 QLTDTM--------AKRNTVIGTPFWMAPEVIQ------------EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMR- 206 (256)
T ss_pred hcccCc--------cccccccCCccccCHHHHh------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhh-
Confidence 652211 1122345788999997654 4568889999999999999999999987432110
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ... .. ...+. ...+......+.+++.+||..+|++|||+.|+++
T Consensus 207 ---~~-~~~-~~----~~~~~----------~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 207 ---AI-FMI-PN----KPPPT----------LSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred ---hh-hhh-cc----CCCCC----------CCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00 000 00 00000 0112233456789999999999999999999975
No 249
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.5e-33 Score=300.09 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=195.0
Q ss_pred CcccccCcceEEEEEECC-CCc--EEEEEEecccch-hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGE-NGT--FVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~-~~~--~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|++|.||+|.+.. +++ .||+|++..... ...+.+.+|++.+++++|+||+++++++. . ...++||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~-~~~~~v~ 74 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVL-----T-HPLMMVT 74 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEc-----C-CeEEEEE
Confidence 468999999999999864 333 699999975544 56678999999999999999999999853 2 5789999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++++|.+++..... ..+++..++.++.|++.||.|||++ +++||||||+||+++.++.+||+|||.++..
T Consensus 75 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~ 147 (257)
T cd05040 75 ELAPLGSLLDRLRKDAL----GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRAL 147 (257)
T ss_pred EecCCCcHHHHHHhccc----ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEeccccccccc
Confidence 99999999999987542 2478999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCcc
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLT 919 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~ 919 (997)
..... .........++..|+|||.+ .+..++.++|||||||++|||++ |+.||....
T Consensus 148 ~~~~~-----~~~~~~~~~~~~~y~~pE~~------------~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~----- 205 (257)
T cd05040 148 PQNED-----HYVMEEHLKVPFAWCAPESL------------RTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLS----- 205 (257)
T ss_pred ccccc-----ceecccCCCCCceecCHHHh------------cccCcCchhhhHHHHHHHHHHHhCCCCCCCCCC-----
Confidence 32111 11111234567889999654 35678899999999999999999 999986321
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..+...... .. ... ...+...+..+.+++.+||+.+|++||++.|+++.|.
T Consensus 206 ~~~~~~~~~-----~~-~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 206 GSQILKKID-----KE-GER----------LERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred HHHHHHHHH-----hc-CCc----------CCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 111111100 00 000 0111233567889999999999999999999999875
No 250
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=2.5e-33 Score=316.35 Aligned_cols=277 Identities=20% Similarity=0.232 Sum_probs=198.2
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-c
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSID-F 750 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~ 750 (997)
..+..++|++.+.||+|+||+||+|....+++.||||++.... ....+.+.+|++++++++|+||+++++++.... .
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3345678999999999999999999998899999999986432 223456788999999999999999998864321 1
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
......++++|++ +++|.+++... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~k 158 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ-------KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELR 158 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEE
Confidence 2234578999988 78999888653 378899999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+++.... ......||+.|+|||++.. ...++.++||||+||++|||++|+.||
T Consensus 159 l~Dfg~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~~g~~pf 216 (343)
T cd07878 159 ILDFGLARQADD-----------EMTGYVATRWYRAPEIMLN-----------WMHYNQTVDIWSVGCIMAELLKGKALF 216 (343)
T ss_pred EcCCccceecCC-----------CcCCccccccccCchHhcC-----------CccCCchhhhHhHHHHHHHHHHCCCCC
Confidence 999999975421 1123468999999976642 245788999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhh--cchhhhhhcCcccc----ccc---ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 911 NCMFQGGLTLHEFCKMA--LPEKVMETVDPSLL----LAW---SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~----~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
...... ..+..+.... ........+..... ... .............+.+.+++.+|+..||++|||+.|+
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~el 295 (343)
T cd07878 217 PGNDYI-DQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEA 295 (343)
T ss_pred CCCCHH-HHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 642110 0111111100 00000000000000 000 0000000001123457799999999999999999999
Q ss_pred HHH
Q 001908 982 LAK 984 (997)
Q Consensus 982 l~~ 984 (997)
++.
T Consensus 296 l~h 298 (343)
T cd07878 296 LAH 298 (343)
T ss_pred hcC
Confidence 853
No 251
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.8e-33 Score=305.73 Aligned_cols=254 Identities=26% Similarity=0.425 Sum_probs=196.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccch---------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK---------GALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~---------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
+|.+...||+|+||.||+|....+++.||+|++..... ...+.+.+|++++++++||||+++++++.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---- 76 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSL---- 76 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEE----
Confidence 47788999999999999999988899999998863221 12357889999999999999999999854
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
..+..++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||++++++.+|
T Consensus 77 -~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~ 146 (267)
T cd06628 77 -DADHLNIFLEYVPGGSVAALLNNYG------AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIK 146 (267)
T ss_pred -eCCccEEEEEecCCCCHHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEE
Confidence 4568899999999999999997654 477888999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||.++.......... .........|+..|+|||.+ .+..++.++||||+||++|+|++|+.||
T Consensus 147 l~dfg~~~~~~~~~~~~~--~~~~~~~~~~~~~y~~pe~~------------~~~~~~~~~Dv~slG~il~~l~~g~~p~ 212 (267)
T cd06628 147 ISDFGISKKLEANSLSTK--TNGARPSLQGSVFWMAPEVV------------KQTSYTRKADIWSLGCLVVEMLTGKHPF 212 (267)
T ss_pred ecccCCCcccccccccCC--ccccccccCCCcCccChhHh------------ccCCCCchhhhHHHHHHHHHHhhCCCCC
Confidence 999999987632211111 11112234588899999654 3566788999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... ..... .......+.. +...+..+.+++.+||+.||++||++.|+++
T Consensus 213 ~~~~~----~~~~~------~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 213 PDCTQ----LQAIF------KIGENASPEI------------PSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred CCccH----HHHHH------HHhccCCCcC------------CcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 74211 11110 0001111111 1123456789999999999999999999875
No 252
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=3.6e-33 Score=302.43 Aligned_cols=257 Identities=23% Similarity=0.337 Sum_probs=201.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||+|....+++.+|+|++........+.+.+|++++++++||||+++++++ ......++
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~l 77 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY-----LRRDKLWI 77 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE-----EeCCEEEE
Confidence 5788999999999999999999888999999999866555678899999999999999999999984 34568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
+|||+++++|.+++..... .++...+..++.|++.|++|||+. +|+|+||||+||++++++.+||+|||.+.
T Consensus 78 ~~e~~~~~~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 149 (262)
T cd06613 78 VMEYCGGGSLQDIYQVTRG-----PLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSA 149 (262)
T ss_pred EEeCCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccch
Confidence 9999999999999987521 478889999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........++..|+|||.+... ....++.++|||||||++|||+||+.||......
T Consensus 150 ~~~~~--------~~~~~~~~~~~~y~~Pe~~~~~---------~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~-- 210 (262)
T cd06613 150 QLTAT--------IAKRKSFIGTPYWMAPEVAAVE---------RKGGYDGKCDIWALGITAIELAELQPPMFDLHPM-- 210 (262)
T ss_pred hhhhh--------hhccccccCCccccCchhhccc---------ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--
Confidence 65221 1112235678899999765421 0136788999999999999999999998643211
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....... . ....+.. .......+.++.+++.+||..+|.+|||+.|++.
T Consensus 211 --~~~~~~~--~---~~~~~~~---------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 211 --RALFLIS--K---SNFPPPK---------LKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred --HHHHHHH--h---ccCCCcc---------ccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1100000 0 0000000 0112233556889999999999999999999875
No 253
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=3.6e-33 Score=303.22 Aligned_cols=254 Identities=22% Similarity=0.349 Sum_probs=193.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.+|+..+.||+|+||.||+|....+++.||+|++... .......+.+|++++++++|+||+++++++.. ...
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRD---RAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEc---CCC
Confidence 4688999999999999999999889999999988632 12344678899999999999999999998643 224
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++++||+++++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~d 149 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG------ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEcc
Confidence 57899999999999999997654 367888999999999999999998 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++....... .........++..|+|||.+ .+..++.++||||+||++|||++|+.||...
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~ 212 (266)
T cd06651 150 FGASKRLQTICM-----SGTGIRSVTGTPYWMSPEVI------------SGEGYGRKADVWSLGCTVVEMLTEKPPWAEY 212 (266)
T ss_pred CCCccccccccc-----cCCccccCCccccccCHHHh------------CCCCCCchhhhHHHHHHHHHHHHCCCCcccc
Confidence 999876522110 11111234588899999654 3566889999999999999999999998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ...... . ......+.+ +......+.+++ .||..+|++||+++|+++
T Consensus 213 ~~----~~~~~~-~----~~~~~~~~~------------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 213 EA----MAAIFK-I----ATQPTNPQL------------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred ch----HHHHHH-H----hcCCCCCCC------------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 11 111100 0 000011111 112234556666 688899999999999975
No 254
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=287.92 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=202.1
Q ss_pred HhhcCccC-CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSS-NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
.+++|++. ++||-|-.|.|-.+..+.+++++|+|++... ...++|++..-.. .|||||.++++|... +.+..
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rk 132 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENS-YQGRK 132 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCce
Confidence 34566654 5789999999999999999999999998643 4567788876544 699999999998664 66777
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl 831 (997)
.+.+|||.|+||.|...+++++.. .+++.++-.|++||..|+.|||+. .|.||||||+|+|... |-.+|+
T Consensus 133 cLLiVmE~meGGeLfsriq~~g~~----afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKL 205 (400)
T KOG0604|consen 133 CLLIVMECMEGGELFSRIQDRGDQ----AFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKL 205 (400)
T ss_pred eeEeeeecccchHHHHHHHHcccc----cchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEe
Confidence 899999999999999999998743 489999999999999999999999 9999999999999975 458999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+... ........+-|+.|+|||++. ..+|+..+|+||+||++|-|++|.+||+
T Consensus 206 tDfGFAK~t~---------~~~~L~TPc~TPyYvaPevlg------------~eKydkscdmwSlgVimYIlLCGyPPFY 264 (400)
T KOG0604|consen 206 TDFGFAKETQ---------EPGDLMTPCFTPYYVAPEVLG------------PEKYDKSCDMWSLGVIMYILLCGYPPFY 264 (400)
T ss_pred cccccccccC---------CCccccCCcccccccCHHHhC------------chhcCCCCCccchhHHHHHhhcCCCccc
Confidence 9999998642 123345567899999997765 4679999999999999999999999999
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+..-.+..+...-.+..+ ++-.+...+..++|..+++.+|++|.|+.|++.
T Consensus 265 S~hg--~aispgMk~rI~~gqy~FP~-------------pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 265 SNHG--LAISPGMKRRIRTGQYEFPE-------------PEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred ccCC--ccCChhHHhHhhccCccCCC-------------hhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 6532 11211111111111111111 122344556789999999999999999999864
No 255
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=1.1e-33 Score=309.09 Aligned_cols=249 Identities=24% Similarity=0.356 Sum_probs=196.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.|+..+.||+|+||.||+|.+..+++.||+|+++.. .....+.+.+|++++++++||||+++++++ ......+
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 78 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY-----LKGTKLW 78 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc-----ccCCceE
Confidence 3466778899999999999999888999999998743 244556889999999999999999999985 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++... .+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.+|++|||++
T Consensus 79 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06642 79 IIMEYLGGGSALDLLKPG-------PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVA 148 (277)
T ss_pred EEEEccCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccccc
Confidence 999999999999998653 378889999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........|+..|+|||.+ .+..++.++|||||||++|||++|+.||......
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~- 207 (277)
T cd06642 149 GQLTDT--------QIKRNTFVGTPFWMAPEVI------------KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM- 207 (277)
T ss_pred ccccCc--------chhhhcccCcccccCHHHh------------CcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh-
Confidence 765221 1112234578899999654 3566888999999999999999999998633211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..... . .....+.. ...++.++.+++.+||..+|++||++.|+++.
T Consensus 208 ----~~~~~-~----~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 208 ----RVLFL-I----PKNSPPTL------------EGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred ----hHHhh-h----hcCCCCCC------------CcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 00000 0 00001111 11235567899999999999999999999873
No 256
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.6e-33 Score=306.31 Aligned_cols=251 Identities=24% Similarity=0.311 Sum_probs=192.8
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
|+..+.||+|+||+||+|.+..+++.||+|++.... ......+.+|++++++++|++++++.+++ ...+..+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~-----~~~~~~~ 76 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY-----ETKDALC 76 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE-----ecCCEEE
Confidence 667789999999999999999899999999986432 22335578899999999999999998874 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ..+++..+..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||++
T Consensus 77 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~ 149 (285)
T cd05632 77 LVLTIMNGGDLKFHIYNMGN----PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLA 149 (285)
T ss_pred EEEEeccCccHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcc
Confidence 99999999999999875431 2488999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... .......|+..|+|||.+ .+..++.++||||+||++|||++|..||.......
T Consensus 150 ~~~~~~---------~~~~~~~g~~~~~aPE~~------------~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~ 208 (285)
T cd05632 150 VKIPEG---------ESIRGRVGTVGYMAPEVL------------NNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV 208 (285)
T ss_pred eecCCC---------CcccCCCCCcCccChHHh------------cCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 654211 111234689999999654 35678899999999999999999999997432110
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
..... ... .... .... ......++.+++..||..||++||+ +.++++
T Consensus 209 -~~~~~-~~~----~~~~-~~~~------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 209 -KREEV-DRR----VLET-EEVY------------SAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred -HHHHH-HHh----hhcc-cccc------------CccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 01111 000 0000 0000 1122445678999999999999999 556655
No 257
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.1e-33 Score=303.95 Aligned_cols=254 Identities=31% Similarity=0.510 Sum_probs=198.4
Q ss_pred CcccccCcceEEEEEECCC---CcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGEN---GTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|..... +..||+|+++..... ..+.+.+|++.++.++|+|++++++++. .....++||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~lv~ 75 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCT-----EEEPLYLVL 75 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeec-----CCCceEEEE
Confidence 4699999999999999755 889999999754333 3678899999999999999999999854 356899999
Q ss_pred eeccCCCHHHHhhcCCCC---CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 761 EYMQNGSLEEWLHQSNGQ---PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~---~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
||+++++|.+++...... .....+++..+++++.|++.|++|||++ +|+||||||+||+++.++.+|++|||.+
T Consensus 76 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~ 152 (262)
T cd00192 76 EYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLS 152 (262)
T ss_pred EeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccccc
Confidence 999999999999875211 0012589999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
........ ........++..|+|||.+. ...++.++||||+||++|||++ |..||....
T Consensus 153 ~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-- 212 (262)
T cd00192 153 RDVYDDDY------YRKKTGGKLPIRWMAPESLK------------DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS-- 212 (262)
T ss_pred cccccccc------cccccCCCcCccccCHHHhc------------cCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--
Confidence 87632211 11223455788999997554 4578899999999999999999 699987541
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..+....... . .....+..++.++.+++.+||..+|++||++.|+++.|+
T Consensus 213 ---~~~~~~~~~~-----~------------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 213 ---NEEVLEYLRK-----G------------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ---HHHHHHHHHc-----C------------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 1111111100 0 001112233567889999999999999999999998763
No 258
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.1e-33 Score=321.19 Aligned_cols=208 Identities=25% Similarity=0.353 Sum_probs=172.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|+..+.||+|+||+||+|+.+.+++.||+|+++.. .......+.+|++++.+++|++|+++++++ .+.+.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~-----~~~~~ 75 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF-----QDKRN 75 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 3688899999999999999999989999999999642 233456788899999999999999999884 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||
T Consensus 76 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 76 LYLIMEFLPGGDMMTLLMKKD------TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred EEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 999999999999999998654 478889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCc---------------------------cccccccccccccccccCCcchhcccccCccccCCCCCCC
Q 001908 836 LARFLFARPFDTS---------------------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888 (997)
Q Consensus 836 ~a~~~~~~~~~~~---------------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~ 888 (997)
+++.......... ..........+||+.|+|||++. +..++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~------------~~~~~ 214 (360)
T cd05627 147 LCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM------------QTGYN 214 (360)
T ss_pred CCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc------------CCCCC
Confidence 9875422100000 00001112357999999996653 56788
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCc
Q 001908 889 VTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 889 ~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
.++|||||||++|||++|+.||..
T Consensus 215 ~~~DiwSlGvilyel~tG~~Pf~~ 238 (360)
T cd05627 215 KLCDWWSLGVIMYEMLIGYPPFCS 238 (360)
T ss_pred CcceeccccceeeecccCCCCCCC
Confidence 999999999999999999999974
No 259
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.4e-33 Score=309.69 Aligned_cols=271 Identities=23% Similarity=0.343 Sum_probs=194.5
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|+||.||+|++..+|+.||+|+++.. .......+.+|++++++++|+||++++++ +.+....+
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~-----~~~~~~~~ 75 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDV-----LHSDKKLT 75 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHH-----hccCCceE
Confidence 477889999999999999999999999999998643 22234567889999999999999999998 45566899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||++ ++|.+++..... .+++..++.++.||++|+.|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 76 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 146 (284)
T cd07839 76 LVFEYCD-QDLKKYFDSCNG-----DIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLA 146 (284)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchh
Confidence 9999996 588888875431 378999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... .......++..|+|||.+.. ...++.++|||||||++|||+||+.|+.......
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~ 207 (284)
T cd07839 147 RAFGIPV--------RCYSAEVVTLWYRPPDVLFG-----------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD 207 (284)
T ss_pred hccCCCC--------CCcCCCccccCCcChHHHhC-----------CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHH
Confidence 7542110 11123457889999976642 2346889999999999999999999865332211
Q ss_pred ccHHHHHHhhc-c-hh----hhhhcCcccccccccchh-hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMAL-P-EK----VMETVDPSLLLAWSDGRR-RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~-~-~~----~~~~~d~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+........ + .. .....+......+..... .........++.+++.+||..||++|||+.|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 208 DQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred HHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 11111100000 0 00 000001000000000000 0111123456789999999999999999999875
No 260
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.6e-33 Score=305.61 Aligned_cols=265 Identities=25% Similarity=0.404 Sum_probs=197.2
Q ss_pred CccCCcccccCcceEEEEEEC---CCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC-Cc
Q 001908 681 FSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG-AD 754 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~-~~ 754 (997)
|.+.+.||+|+||.||+|.++ .+++.||||++... .....+.+.+|++++++++||||+++++++......+ ..
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 567889999999999999874 35789999998643 3345667889999999999999999999875432111 12
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++++||+++|+|.+++...........+++..++.++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 3578999999999999886443222223478889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.++....... ........+++.|++||.+. ...++.++|||||||++|||++ |++||...
T Consensus 158 g~~~~~~~~~~------~~~~~~~~~~~~~~~pe~~~------------~~~~~~~sDi~slG~il~el~~~g~~p~~~~ 219 (273)
T cd05074 158 GLSKKIYSGDY------YRQGCASKLPVKWLALESLA------------DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGV 219 (273)
T ss_pred cccccccCCcc------eecCCCccCchhhcCHhHHh------------cCccchhhhhHHHHHHHHHHhhCCCCCCCCC
Confidence 99986522111 11112234567899996553 4567889999999999999999 88887633
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
.. ........ .. .... .+..++..+.+++.+||..+|++||+++++++.|+++
T Consensus 220 ~~--~~~~~~~~--~~------~~~~------------~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 220 EN--SEIYNYLI--KG------NRLK------------QPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CH--HHHHHHHH--cC------CcCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 11 11111100 00 0000 0112345788999999999999999999999999875
No 261
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.7e-33 Score=308.91 Aligned_cols=263 Identities=22% Similarity=0.326 Sum_probs=200.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|.+..+++.||+|++.... ....+.+.+|+++++.++||||+++++++. .....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 78 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFL-----NENNI 78 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEe-----cCCEE
Confidence 357888999999999999999999899999999886432 334578899999999999999999999964 34689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.+.. .+++..+..++.+++.|+.|||+.. +++||||||+||+++.++.++|+|||+
T Consensus 79 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~gl 150 (284)
T cd06620 79 CMCMEFMDCGSLDRIYKKGG------PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFGV 150 (284)
T ss_pred EEEEecCCCCCHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCCc
Confidence 99999999999999987653 4788999999999999999999742 899999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+..... .......|+..|+|||.+ .+..++.++|||||||++|++++|+.||......
T Consensus 151 ~~~~~~----------~~~~~~~~~~~~~aPE~~------------~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~ 208 (284)
T cd06620 151 SGELIN----------SIADTFVGTSTYMSPERI------------QGGKYTVKSDVWSLGISIIELALGKFPFAFSNID 208 (284)
T ss_pred ccchhh----------hccCccccCcccCCHHHH------------ccCCCCccchHHHHHHHHHHHHhCCCCCcccchh
Confidence 865411 111234689999999654 3467888999999999999999999999854321
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
...... ................ ......+++..+.+++.+||..||++|||+.|+++..
T Consensus 209 ~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 209 DDGQDD--PMGILDLLQQIVQEPP--------PRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred hhhhhh--hhHHHHHHHHHhhccC--------CCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 100000 0000000000000000 0000112456788999999999999999999999763
No 262
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=1.9e-33 Score=304.52 Aligned_cols=256 Identities=26% Similarity=0.439 Sum_probs=198.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.++||+|+||.||+|... +++.||||.+..... ..+.+.+|++++++++|+|++++++++ ......
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 76 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVC-----SEEEPI 76 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeee-----ecCCce
Confidence 3468999999999999999999986 567899999874332 346789999999999999999999984 344578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.+... ..+++.++..++.|++.|++|||++ +++|+||||+||++++++.+|++|||.
T Consensus 77 ~~v~e~~~~~~L~~~i~~~~~----~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~ 149 (261)
T cd05034 77 YIVTEYMSKGSLLDFLKSGEG----KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGL 149 (261)
T ss_pred EEEEeccCCCCHHHHHhcccc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECcccc
Confidence 999999999999999987542 2478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
++...... ........++..|+|||.+ .+..++.++||||+||++||+++ |+.||....
T Consensus 150 ~~~~~~~~-------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~- 209 (261)
T cd05034 150 ARLIEDDE-------YTAREGAKFPIKWTAPEAA------------NYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT- 209 (261)
T ss_pred ceeccchh-------hhhhhccCCCccccCHHHh------------ccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 87652211 1111122345689999654 35678889999999999999999 999986331
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
......... .... .+.+..++.++.+++.+|+..+|++||+++++.+.|+.
T Consensus 210 ----~~~~~~~~~-----~~~~------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 210 ----NREVLEQVE-----RGYR------------MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ----HHHHHHHHH-----cCCC------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 111111110 0000 00111224578899999999999999999999998874
No 263
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=8.4e-33 Score=298.62 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=197.0
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|++|.||+++.+.+++.||+|++... .....+.+.+|++++++++|+|++++.+.+. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----~~~~~~~ 76 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWE----GEDGLLY 76 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeec----CCCCEEE
Confidence 478899999999999999999988999999998633 2344567889999999999999999988742 1234689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++..... ..+++.+++.++.|++.|++|||+. +|+||||||+||+++.++.++|+|||++
T Consensus 77 lv~e~~~~~~l~~~l~~~~~----~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~ 149 (257)
T cd08223 77 IVMGFCEGGDLYHKLKEQKG----KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIA 149 (257)
T ss_pred EEecccCCCcHHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccce
Confidence 99999999999999986432 2478999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... .......+++.|+|||.+ .+..++.++||||+||+++||++|+.||....
T Consensus 150 ~~~~~~~--------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~--- 206 (257)
T cd08223 150 RVLENQC--------DMASTLIGTPYYMSPELF------------SNKPYNYKSDVWALGCCVYEMATLKHAFNAKD--- 206 (257)
T ss_pred EEecccC--------CccccccCCcCccChhHh------------cCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC---
Confidence 7652211 112234688999999654 35678889999999999999999999986321
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
............. +. .+.....++.+++.+||..+|++||++.++++
T Consensus 207 --~~~~~~~~~~~~~-----~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 207 --MNSLVYRIIEGKL-----PP------------MPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred --HHHHHHHHHhcCC-----CC------------CccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1221111110000 00 01123457889999999999999999999975
No 264
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=4.5e-33 Score=303.88 Aligned_cols=249 Identities=24% Similarity=0.348 Sum_probs=198.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||.|+||.||+|+...+++.||+|++.... ......+.+|+++++.++|+|++++.+++. +....+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFL-----KGSKLW 75 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEE-----ECCeEE
Confidence 36888999999999999999999899999999987432 444567889999999999999999999854 346899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||+++++|.+++... .+++..+..++.|++.|+.|||++ +++||||+|+||++++++.++++|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~ 145 (274)
T cd06609 76 IIMEYCGGGSCLDLLKPG-------KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVS 145 (274)
T ss_pred EEEEeeCCCcHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 999999999999999864 378899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... .......++..|+|||.+. +..++.++|||||||++|||+||+.||.....
T Consensus 146 ~~~~~~~--------~~~~~~~~~~~y~~PE~~~------------~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-- 203 (274)
T cd06609 146 GQLTSTM--------SKRNTFVGTPFWMAPEVIK------------QSGYDEKADIWSLGITAIELAKGEPPLSDLHP-- 203 (274)
T ss_pred eeecccc--------cccccccCCccccChhhhc------------cCCCCchhhHHHHHHHHHHHHhCCCCcccCch--
Confidence 8763211 1223356788999996553 45689999999999999999999999874321
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+..... . ....+.... ..++.++.+++.+||..+|++|||++++++
T Consensus 204 ---~~~~~~~-~----~~~~~~~~~-----------~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 204 ---MRVLFLI-P----KNNPPSLEG-----------NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ---HHHHHHh-h----hcCCCCCcc-----------cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 1110000 0 001111100 003456788999999999999999999965
No 265
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=1.2e-33 Score=317.71 Aligned_cols=279 Identities=20% Similarity=0.242 Sum_probs=202.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+++|++.++||+|+||.||+|++..+++.||+|++... .......+.+|++++++++|+||+++++++....+......
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46899999999999999999999989999999998643 23344667889999999999999999998766555555678
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++|+||++ +++.+++... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-------~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~ 152 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ-------HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGL 152 (336)
T ss_pred EEEehhcc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccc
Confidence 99999995 5888888654 388899999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+........ .........||..|+|||.+.. ...++.++||||+||++|+|++|+.||......
T Consensus 153 ~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~ 216 (336)
T cd07849 153 ARIADPEHD-----HTGFLTEYVATRWYRAPEIMLN-----------SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYL 216 (336)
T ss_pred eeecccccc-----ccCCcCCcCcCCCccChHHhhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 976522111 1112233568999999976431 345788999999999999999999999643110
Q ss_pred CccHHHHHHhh---cchhhhhhcCcccccc---cccchhhh---hHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 917 GLTLHEFCKMA---LPEKVMETVDPSLLLA---WSDGRRRA---KVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 917 ~~~~~~~~~~~---~~~~~~~~~d~~~~~~---~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.....+.... .++......+...... .......+ .......++.+++.+||+.+|++|||+.|+++.
T Consensus 217 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 217 -HQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred -HHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0011110000 0111111111110000 00000000 011234568899999999999999999999874
No 266
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.8e-33 Score=306.05 Aligned_cols=254 Identities=26% Similarity=0.437 Sum_probs=192.9
Q ss_pred CcccccCcceEEEEEECCCC------cEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 685 NMIGQGSFGSVYKGILGENG------TFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.||+|+||.||+|+..... +.||+|.+.... ......+.+|+++++.++||||+++++++. ..+..+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 75 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCL-----LNEPQY 75 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeec-----CCCCeE
Confidence 46899999999999986433 689999886432 344567889999999999999999999854 345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-----cEEE
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHV 831 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-----~~kl 831 (997)
+||||+++++|.+++....... ....+++.+++.++.|++.|++|||+. +++|+||||+||+++.++ .+|+
T Consensus 76 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 76 IIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred EEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEE
Confidence 9999999999999998643221 223478899999999999999999998 999999999999999888 8999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+++....... ........++..|+|||.+ .++.++.++|||||||++|||+| |+.||
T Consensus 153 ~dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slG~il~ellt~g~~p~ 214 (269)
T cd05044 153 GDFGLARDIYKSDY------YRKEGEGLLPVRWMAPESL------------LDGKFTTQSDVWSFGVLMWEILTLGQQPY 214 (269)
T ss_pred CCcccccccccccc------cccCcccCCCccccCHHHH------------ccCCcccchhHHHHHHHHHHHHHcCCCCC
Confidence 99999976532211 1111223456789999655 35678899999999999999998 99998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..... .+..... +.. .....+...+..+.+++.+||..+|++||+++++++.|.
T Consensus 215 ~~~~~-----~~~~~~~---------~~~--------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 215 PALNN-----QEVLQHV---------TAG--------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred cccCH-----HHHHHHH---------hcC--------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 63211 1111100 000 000111234567889999999999999999999999886
No 267
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4e-33 Score=301.00 Aligned_cols=251 Identities=21% Similarity=0.312 Sum_probs=199.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|+||.||.++...+++.+|+|++... .....+.+.+|++++++++|+||+++++++. +.+..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~~ 75 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFM-----DDNTLL 75 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEe-----cCCeEE
Confidence 478899999999999999999989999999998643 3445677899999999999999999999953 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++.+... ..+++.++..++.|++.|++|||+. +++|+||||+||++++++.+||+|||.+
T Consensus 76 ~~~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~ 148 (256)
T cd08221 76 IEMEYANGGTLYDKIVRQKG----QLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGIS 148 (256)
T ss_pred EEEEecCCCcHHHHHHhccc----cCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcce
Confidence 99999999999999987531 2478899999999999999999998 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... .......|++.|+|||.+. +..++.++||||||+++|||++|+.||...
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~y~ape~~~------------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---- 204 (256)
T cd08221 149 KILGSEY--------SMAETVVGTPYYMSPELCQ------------GVKYNFKSDIWALGCVLYELLTLKRTFDAT---- 204 (256)
T ss_pred EEccccc--------ccccccCCCccccCHhhcC------------CCCCCCcchhHHHHHHHHHHHHCCCCCCCC----
Confidence 7652211 1123356889999996543 456788999999999999999999998632
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+.......... . .....++..+.+++.+||..+|++||++.|+++.
T Consensus 205 -~~~~~~~~~~~~~~----~-------------~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 205 -NPLNLVVKIVQGNY----T-------------PVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -CHHHHHHHHHcCCC----C-------------CCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 11121111111000 0 0012234567899999999999999999999875
No 268
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-33 Score=315.83 Aligned_cols=194 Identities=22% Similarity=0.350 Sum_probs=161.9
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
....+|++.+.||+|+||.||+|+...+++.||+|+.... ....|+.++++++|+||+++++++. ....
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~ 131 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLV-----SGAI 131 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEE-----eCCe
Confidence 3446799999999999999999999988999999985422 2356899999999999999999854 3457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++|+||+ .++|.+++.... ..+++..++.++.||+.||.|||++ +|+||||||+||+++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 132 TCMVLPHY-SSDLYTYLTKRS-----RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred eEEEEEcc-CCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 89999999 569999887643 2478999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
.++.... ........||+.|+|||++ .+..++.++|||||||++|||+++..|+
T Consensus 203 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 203 AAQFPVV---------APAFLGLAGTVETNAPEVL------------ARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ccccccc---------CcccccccccccccCCeec------------CCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 9974311 1112335689999999654 4567899999999999999999965544
No 269
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.9e-33 Score=299.60 Aligned_cols=241 Identities=22% Similarity=0.395 Sum_probs=184.4
Q ss_pred CcccccCcceEEEEEECCC------------CcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 685 NMIGQGSFGSVYKGILGEN------------GTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
+.||+|+||.||+|+.... ..+||+|++..........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~----- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVR----- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 4689999999999986422 23689999876555555688899999999999999999999643
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc----
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---- 828 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~---- 828 (997)
....++||||+++|+|..++..... .+++..+++++.||++|++|||++ +|+||||||+||+++.++.
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~ 147 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSD-----VLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGEC 147 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCC
Confidence 4467999999999999999876431 378889999999999999999999 9999999999999987664
Q ss_pred ---EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH-
Q 001908 829 ---AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF- 904 (997)
Q Consensus 829 ---~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell- 904 (997)
+|++|||.+..... .....++..|+|||.+.. +..++.++|||||||++|||+
T Consensus 148 ~~~~~l~d~g~~~~~~~------------~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~~l~el~~ 204 (262)
T cd05077 148 GPFIKLSDPGIPITVLS------------RQECVERIPWIAPECVED-----------SKNLSIAADKWSFGTTLWEICY 204 (262)
T ss_pred CceeEeCCCCCCccccC------------cccccccccccChhhhcC-----------CCCCCchhHHHHHHHHHHHHHh
Confidence 89999999865411 122457889999976531 356788999999999999998
Q ss_pred hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 905 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
+|..||.... ..+.... .. ..... ......++.+++.+||+.||.+||++.++++.
T Consensus 205 ~~~~p~~~~~-----~~~~~~~------~~---~~~~~----------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~ 260 (262)
T cd05077 205 NGEIPLKDKT-----LAEKERF------YE---GQCML----------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD 260 (262)
T ss_pred CCCCCCCCcc-----hhHHHHH------Hh---cCccC----------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence 5888875321 1111000 00 00000 00113467899999999999999999999987
Q ss_pred H
Q 001908 985 L 985 (997)
Q Consensus 985 L 985 (997)
+
T Consensus 261 ~ 261 (262)
T cd05077 261 I 261 (262)
T ss_pred c
Confidence 6
No 270
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.3e-33 Score=302.92 Aligned_cols=252 Identities=27% Similarity=0.458 Sum_probs=194.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|++.+.||+|+||.||+|.+. .++.+|+|++.... .....+.+|++++++++|||++++++++ ......++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 76 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVC-----TERSPICL 76 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEE-----ccCCceEE
Confidence 47888999999999999999986 57789999886432 2235788999999999999999999985 34457899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++..... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++
T Consensus 77 v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~ 148 (256)
T cd05112 77 VFEFMEHGCLSDYLRAQRG-----KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTR 148 (256)
T ss_pred EEEcCCCCcHHHHHHhCcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCccee
Confidence 9999999999999976532 367889999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
....... .......++..|+|||.+ .++.++.++|||||||++|||++ |+.||....
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~~~aPe~~------------~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--- 206 (256)
T cd05112 149 FVLDDQY-------TSSTGTKFPVKWSSPEVF------------SFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRS--- 206 (256)
T ss_pred ecccCcc-------cccCCCccchhhcCHhHh------------ccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCC---
Confidence 6532111 111223356789999654 35678889999999999999998 999986321
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..+........ ....++. ..+.++.+++.+||+.+|++||++.|+++.|+
T Consensus 207 --~~~~~~~~~~~--~~~~~~~---------------~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 207 --NSEVVETINAG--FRLYKPR---------------LASQSVYELMQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred --HHHHHHHHhCC--CCCCCCC---------------CCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence 11111111000 0000111 12456889999999999999999999998873
No 271
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=4.5e-33 Score=301.36 Aligned_cols=254 Identities=24% Similarity=0.427 Sum_probs=196.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|... .+..+|+|++... ....+.+.+|++++++++|+||+++.+++.. ...+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~ 76 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK------EPIY 76 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC------CCeE
Confidence 357889999999999999999876 5667999988643 2345678899999999999999999988532 4689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++.+... ...++.+++.++.|++.|+.|||+. +++||||||+||+++.++.+|++|||.+
T Consensus 77 ~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 149 (260)
T cd05073 77 IITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLA 149 (260)
T ss_pred EEEEeCCCCcHHHHHHhCCc----cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcce
Confidence 99999999999999987532 2478889999999999999999998 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
....... ........++..|+|||.+ .+..++.++|||||||++|+++| |+.||....
T Consensus 150 ~~~~~~~-------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~-- 208 (260)
T cd05073 150 RVIEDNE-------YTAREGAKFPIKWTAPEAI------------NFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-- 208 (260)
T ss_pred eeccCCC-------cccccCCcccccccCHhHh------------ccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--
Confidence 7542211 1111223456789999654 35668889999999999999999 899986431
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+........ ... +.....+.++.+++.+||+.+|++||++.++.+.|+.
T Consensus 209 ---~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 209 ---NPEVIRALERG-----YRM------------PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ---HHHHHHHHhCC-----CCC------------CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 11111110000 000 0011234568899999999999999999999999874
No 272
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8.8e-33 Score=298.34 Aligned_cols=250 Identities=21% Similarity=0.312 Sum_probs=198.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|+||.||+++...+++.||+|++... .....+.+.+|++++++++|+||+++++++ ...++.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESF-----EENGNLY 75 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeee-----cCCCeEE
Confidence 478899999999999999999989999999998632 334456889999999999999999999984 4566899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ..+++.++++++.|++.|++|||++ +++|+||+|+||+++.++.++++|||.+
T Consensus 76 lv~e~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~ 148 (256)
T cd08218 76 IVMDYCEGGDLYKKINAQRG----VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIA 148 (256)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccce
Confidence 99999999999999986442 1368889999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........|++.|+|||.+ .+..++.++|||||||++++|++|+.||...
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~~~~pe~~------------~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~---- 204 (256)
T cd08218 149 RVLNST--------VELARTCIGTPYYLSPEIC------------ENRPYNNKSDIWALGCVLYEMCTLKHAFEAG---- 204 (256)
T ss_pred eecCcc--------hhhhhhccCCccccCHHHh------------CCCCCCCccchhHHHHHHHHHHcCCCCccCC----
Confidence 754221 1111234578899999654 3566788999999999999999999998632
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+.......... + ..+.....++.+++.+||+.+|++||++.|+++
T Consensus 205 -~~~~~~~~~~~~~~-----~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 205 -NMKNLVLKIIRGSY-----P------------PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred -CHHHHHHHHhcCCC-----C------------CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 12222111111100 0 011233557889999999999999999999986
No 273
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=5.2e-33 Score=304.96 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=192.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHH-HhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEV-LRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||.||+|+++.+|+.||+|+++... ......+..|+.. ++..+||||+++++++. .....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~-----~~~~~ 75 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALF-----REGDV 75 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEe-----cCCcE
Confidence 46889999999999999999999899999999987432 2223455566665 56678999999999864 34579
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
+++|||++ |+|.+++...... ...+++..++.++.||+.|++|||+++ +++||||||+||+++.++.+||+|||.
T Consensus 76 ~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg~ 150 (283)
T cd06617 76 WICMEVMD-TSLDKFYKKVYDK--GLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFGI 150 (283)
T ss_pred EEEhhhhc-ccHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 99999995 6898888764321 235899999999999999999999853 799999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... .......|+..|+|||.+.... ....++.++|||||||++|||++|+.||.....
T Consensus 151 ~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~--------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~- 212 (283)
T cd06617 151 SGYLVDS---------VAKTIDAGCKPYMAPERINPEL--------NQKGYDVKSDVWSLGITMIELATGRFPYDSWKT- 212 (283)
T ss_pred ccccccc---------cccccccCCccccChhhcCCcc--------cccccCccccchhhHHHHHHHHhCCCCCCcccc-
Confidence 8764211 1112245788999998765311 124578899999999999999999999863221
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........ .....+... ...++.++.+++.+||..+|++||++.|+++
T Consensus 213 --~~~~~~~~------~~~~~~~~~-----------~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 213 --PFQQLKQV------VEEPSPQLP-----------AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CHHHHHHH------HhcCCCCCC-----------ccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111100 000111110 0113456889999999999999999999986
No 274
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.5e-33 Score=308.02 Aligned_cols=268 Identities=23% Similarity=0.334 Sum_probs=197.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.++||+|+||.||+|.++.+++.||+|++.... ....+.+.+|+++++.++|+||+++++++ ...+..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~ 75 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVF-----RRKKRL 75 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhc-----ccCCeE
Confidence 46888999999999999999998889999999886322 22346788999999999999999999984 456689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++++++.++..... .+++..++.++.||+.|++|||+. +++|+|++|+||++++++.+|++|||+
T Consensus 76 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~ 146 (286)
T cd07846 76 YLVFEFVDHTVLDDLEKYPN------GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 146 (286)
T ss_pred EEEEecCCccHHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeee
Confidence 99999999999988776543 378999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+....... .......++..|+|||.+.. ...++.++|||||||++|||++|++||....
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~-- 205 (286)
T cd07846 147 ARTLAAPG--------EVYTDYVATRWYRAPELLVG-----------DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDS-- 205 (286)
T ss_pred eeeccCCc--------cccCcccceeeccCcHHhcc-----------ccccCchHhHHHHHHHHHHHHcCCCCCCCCc--
Confidence 87652211 11223457889999976532 2446789999999999999999999986321
Q ss_pred CccHHHHHHh-----hcchhhhhhcCccc------cccc-ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKM-----ALPEKVMETVDPSL------LLAW-SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~-----~~~~~~~~~~d~~~------~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....+... ..........+... .... ............+..+.+++.+||..+|++||+++++++
T Consensus 206 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 206 --DIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred --hHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 11111110 00111111111000 0000 000001111234567899999999999999999999875
No 275
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=6e-33 Score=301.26 Aligned_cols=254 Identities=25% Similarity=0.381 Sum_probs=199.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|+..+.||+|+||.||+|..+.+++.||+|++.... ....+.+.+|++++++++||||+++++++. .....+
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~ 75 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFY-----NNGDIS 75 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeee-----cCCEEE
Confidence 36788899999999999999999899999999987543 345577899999999999999999999854 346899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
+++||+++++|.+++.... ..++...+.+++.|++.|++|||+ . +++|+||||+||++++++.+||+|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g~ 147 (265)
T cd06605 76 ICMEYMDGGSLDKILKEVQ-----GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFGV 147 (265)
T ss_pred EEEEecCCCcHHHHHHHcc-----CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 9999999999999998753 247888999999999999999999 7 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... ......++..|+|||.+. +..++.++|||||||++|+|++|+.||......
T Consensus 148 ~~~~~~~----------~~~~~~~~~~y~~PE~~~------------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~ 205 (265)
T cd06605 148 SGQLVNS----------LAKTFVGTSSYMAPERIQ------------GNDYSVKSDIWSLGLSLIELATGRFPYPPENDP 205 (265)
T ss_pred chhhHHH----------HhhcccCChhccCHHHHc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCccccc
Confidence 8765211 111156888999996553 567889999999999999999999998754322
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.....+...... ....+... ......++.+++.+||..+|++|||+.|+++
T Consensus 206 ~~~~~~~~~~~~-----~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 206 PDGIFELLQYIV-----NEPPPRLP-----------SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred cccHHHHHHHHh-----cCCCCCCC-----------hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 222222211111 00001110 0114556889999999999999999999875
No 276
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=5.1e-33 Score=299.25 Aligned_cols=248 Identities=27% Similarity=0.436 Sum_probs=191.8
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccch-hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
++||+|+||.||+|.... ++.||+|++..... .....+.+|++++++++|+||+++++++. .....++||||+
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~~v~e~~ 74 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCV-----QKQPIYIVMELV 74 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCCeEEEEEcC
Confidence 479999999999999976 99999999875433 34578899999999999999999999854 445789999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++..... .+++..+..++.+++.|++|||++ +++||||||+||+++.++.+||+|||.++.....
T Consensus 75 ~~~~l~~~l~~~~~-----~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~ 146 (251)
T cd05041 75 PGGSLLTFLRKKKN-----RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGG 146 (251)
T ss_pred CCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCC
Confidence 99999999976431 367889999999999999999999 9999999999999999999999999999754211
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHE 922 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~ 922 (997)
.. ........++..|+|||.+ .++.++.++|||||||++|||+| |..||..... ..
T Consensus 147 ~~------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~-----~~ 203 (251)
T cd05041 147 IY------TVSDGLKQIPIKWTAPEAL------------NYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN-----QQ 203 (251)
T ss_pred cc------eeccccCcceeccCChHhh------------ccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH-----HH
Confidence 10 0111112345679999654 35678899999999999999999 8888764321 11
Q ss_pred HHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 923 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
..... .... ....+..++.++.+++.+||..+|++|||+.|+++.|.
T Consensus 204 ~~~~~---------~~~~--------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 204 TRERI---------ESGY--------RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHH---------hcCC--------CCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 10000 0000 00011233567889999999999999999999999885
No 277
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=9.2e-33 Score=299.83 Aligned_cols=254 Identities=21% Similarity=0.307 Sum_probs=193.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||.||+|....+++.||+|++... .....+.+.+|++++++++|+||+++++++.+. ..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP---ME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC---CC
Confidence 4788999999999999999999989999999988532 123456788999999999999999999975431 23
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++++|.+++.... .+++..+.+++.|++.||+|||++ +|+|+||||+||+++.++.+||+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~D 149 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG------ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGD 149 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECc
Confidence 46889999999999999997654 367788899999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.++....... .........|+..|+|||.+. +..++.++|||||||++|||++|+.||...
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~il~el~~g~~p~~~~ 212 (265)
T cd06652 150 FGASKRLQTICL-----SGTGMKSVTGTPYWMSPEVIS------------GEGYGRKADIWSVGCTVVEMLTEKPPWAEF 212 (265)
T ss_pred Cccccccccccc-----cccccccCCCCccccChhhhc------------CCCCCcchhHHHHHHHHHHHhhCCCCCCcc
Confidence 999876522111 111122345889999996553 456788999999999999999999998632
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ......... .....+. .+......+.+++.+|+. +|++||++.|+++
T Consensus 213 ~----~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 213 E----AMAAIFKIA-----TQPTNPV------------LPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred c----hHHHHHHHh-----cCCCCCC------------CchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 1 111111000 0000110 112234456788889985 9999999999875
No 278
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6e-33 Score=320.00 Aligned_cols=269 Identities=21% Similarity=0.248 Sum_probs=193.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
...|.+.+.||+|+||.||+|++..+++.||||.... ..+.+|++++++++|+||+++++++.. .+..+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~-----~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVV-----GGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEE-----CCEEE
Confidence 4479999999999999999999998999999996432 345689999999999999999998543 45789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|||++ .++|.+++..... .+++.+++.++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++
T Consensus 237 lv~e~~-~~~L~~~l~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla 307 (461)
T PHA03211 237 LVLPKY-RSDLYTYLGARLR-----PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAA 307 (461)
T ss_pred EEEEcc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCc
Confidence 999999 5799999876431 489999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC-
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG- 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~- 916 (997)
+...... .........||..|+|||++ .+..++.++|||||||++|||++|..|+......
T Consensus 308 ~~~~~~~------~~~~~~~~~GT~~Y~APE~~------------~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~ 369 (461)
T PHA03211 308 CFARGSW------STPFHYGIAGTVDTNAPEVL------------AGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGD 369 (461)
T ss_pred eeccccc------ccccccccCCCcCCcCHHHH------------cCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccc
Confidence 7652211 11112345799999999655 3567899999999999999999988765432211
Q ss_pred --Ccc---HHHHHHhh-cc-hhhhhhcCccccccc--------ccchh---hhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 917 --GLT---LHEFCKMA-LP-EKVMETVDPSLLLAW--------SDGRR---RAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 917 --~~~---~~~~~~~~-~~-~~~~~~~d~~~~~~~--------~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
... +...+... .. ..+.......+...+ ..... ..........+.+++.+||..||++|||+
T Consensus 370 ~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa 449 (461)
T PHA03211 370 ERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSA 449 (461)
T ss_pred ccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCH
Confidence 111 11111110 00 000000000000000 00000 00001122367889999999999999999
Q ss_pred HHHHHH
Q 001908 979 RDVLAK 984 (997)
Q Consensus 979 ~evl~~ 984 (997)
.|+++.
T Consensus 450 ~elL~h 455 (461)
T PHA03211 450 AELLRL 455 (461)
T ss_pred HHHhhC
Confidence 999863
No 279
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=7.3e-33 Score=306.22 Aligned_cols=271 Identities=23% Similarity=0.296 Sum_probs=196.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccch-----hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-----GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
+|+..+.||+|+||.||+|....+++.||+|+++.... .....+..|++++++++|+||+++++++. +.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFG-----HKS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheee-----cCC
Confidence 47788999999999999999988899999999974332 23456778999999999999999999854 356
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+ +|+|.+++.... ..+++..++.++.||++||+|||++ +|+|+||||+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~-----~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~df 146 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKS-----IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADF 146 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccc
Confidence 899999999 899999997643 1488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++...... .......+++.|+|||.+.. ...++.++|||||||++|||++|.+||....
T Consensus 147 g~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~ 207 (298)
T cd07841 147 GLARSFGSPN--------RKMTHQVVTRWYRAPELLFG-----------ARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207 (298)
T ss_pred eeeeeccCCC--------ccccccccceeeeCHHHHhC-----------CCCCCcHHHHHHHHHHHHHHHcCCccccCCc
Confidence 9997652211 11122346788999976532 2456889999999999999999987776322
Q ss_pred CCCccHHHHHHhhc-c--hhhhhh--c-CcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMAL-P--EKVMET--V-DPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~-~--~~~~~~--~-d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
. ...+........ + ...... . +......................+.+++.+||+.+|++|||+.|+++.
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 208 D-IDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred c-HHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1 111111111000 0 000000 0 000000000000001112335678899999999999999999999873
No 280
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.2e-33 Score=312.29 Aligned_cols=207 Identities=27% Similarity=0.334 Sum_probs=171.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+++.+.+++.||+|++... .......+.+|+.+++.++|++|+++++++ ...+.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~-----~~~~~ 75 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF-----QDENY 75 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EcCCE
Confidence 4789999999999999999999989999999998642 223345678899999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.+... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 76 ~~lv~Ey~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 76 LYLVMDYYVGGDLLTLLSKFED-----RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred EEEEEeCCCCCcHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 9999999999999999986431 377888999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+++...... ........||+.|+|||++.... ...+.++.++|||||||++|||++|+.||..
T Consensus 148 ~a~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~ 210 (331)
T cd05624 148 SCLKMNQDG-------TVQSSVAVGTPDYISPEILQAME-------DGMGKYGPECDWWSLGVCMYEMLYGETPFYA 210 (331)
T ss_pred ceeeccCCC-------ceeeccccCCcccCCHHHHhccc-------cCCCCCCCcccEEeeehhhhhhhhCCCCccC
Confidence 997652211 11112356999999998775321 0114578899999999999999999999973
No 281
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=6.4e-33 Score=300.79 Aligned_cols=254 Identities=21% Similarity=0.293 Sum_probs=199.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|+||.||+|....+++.||+|++... .....+.+..|++++++++|+||+++++++.. ......+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID---RSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec---CCCCEEE
Confidence 478889999999999999999989999999998632 34445678899999999999999999987643 2345689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-----hCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH-----HHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH-----~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
++|||+++++|.+++..... ....+++..++.++.|++.|++||| +. +++|+||||+||+++.++.+|++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~---~i~h~dl~p~nili~~~~~~kl~ 152 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKK--ERKYIEEEFIWRILTQLLLALYECHNRSDPGN---TVLHRDLKPANIFLDANNNVKLG 152 (265)
T ss_pred EEehhccCCCHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhcCccccC---cceecCCCHHHEEEecCCCEEEe
Confidence 99999999999999976431 1235889999999999999999999 66 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+....... .......++..|+|||.+. +..++.++||||||+++|+|++|+.||..
T Consensus 153 d~g~~~~~~~~~--------~~~~~~~~~~~~~~pE~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 212 (265)
T cd08217 153 DFGLAKILGHDS--------SFAKTYVGTPYYMSPEQLN------------HMSYDEKSDIWSLGCLIYELCALSPPFTA 212 (265)
T ss_pred cccccccccCCc--------ccccccccCCCccChhhhc------------CCCCCchhHHHHHHHHHHHHHHCCCcccC
Confidence 999998652211 1122346889999996654 45678899999999999999999999874
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+...... ....+ ..+...+.++.+++.+|+..+|++||++.+|++
T Consensus 213 ~~-----~~~~~~~~~-----~~~~~------------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~ 261 (265)
T cd08217 213 RN-----QLQLASKIK-----EGKFR------------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ 261 (265)
T ss_pred cC-----HHHHHHHHh-----cCCCC------------CCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 32 112111110 00000 111233567889999999999999999999986
No 282
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=2e-32 Score=300.77 Aligned_cols=264 Identities=24% Similarity=0.298 Sum_probs=198.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|...++||.|++|.||+|....+++.||+|++.... ......+.+|++++++++||||++++++|.. ......+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 77 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLD---ESSSSIG 77 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEc---cCCCeEE
Confidence 36788899999999999999998899999999987432 2345778999999999999999999998753 2345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... ....++...+..++.|++.|++|||+. +++|+||+|+||+++.++.++|+|||++
T Consensus 78 lv~e~~~~~~L~~~l~~~~~--~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~ 152 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKK--RGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVS 152 (287)
T ss_pred EEEEecCCCCHHHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccc
Confidence 99999999999998765321 112478888999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ......++..|+|||.+. +..++.++||||+||++|+|++|..||.......
T Consensus 153 ~~~~~~----------~~~~~~~~~~y~~pE~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~ 210 (287)
T cd06621 153 GELVNS----------LAGTFTGTSFYMAPERIQ------------GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP 210 (287)
T ss_pred cccccc----------ccccccCCccccCHHHhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC
Confidence 654211 111345788999996543 5668889999999999999999999997542211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....+......... .+.+.... .........+.+++.+||..+|++|||+.|+++
T Consensus 211 ~~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 211 LGPIELLSYIVNMP-----NPELKDEP------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CChHHHHHHHhcCC-----chhhccCC------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 11111111111000 00000000 000113456889999999999999999999987
No 283
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.1e-32 Score=299.27 Aligned_cols=255 Identities=23% Similarity=0.397 Sum_probs=195.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc------hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ------KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+|+..+.||+|+||+||+|... +++.+|+|.++... ......+.+|++++++++|+||+++.+++. ..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~ 74 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCL-----DD 74 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEee-----cC
Confidence 4788999999999999999875 78899999886321 223456889999999999999999999964 34
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++|+||+++++|.+++.+.. .+++..+..++.|++.|++|||+. +|+|+||||+||++++++.+||+|
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~d 145 (265)
T cd06631 75 NTISIFMEFVPGGSISSILNRFG------PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLID 145 (265)
T ss_pred CeEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEecc
Confidence 68999999999999999997653 367888999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+.......... ..........|+..|+|||.+ .+..++.++||||+||++|+|++|+.||...
T Consensus 146 fg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~pe~~------------~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~ 211 (265)
T cd06631 146 FGCARRLAWVGLHG--THSNMLKSMHGTPYWMAPEVI------------NESGYGRKSDIWSIGCTVFEMATGKPPLASM 211 (265)
T ss_pred chhhHhhhhccccc--cccccccccCCCccccChhhh------------cCCCCcchhhHHHHHHHHHHHHhCCCccccC
Confidence 99998653211111 011112234689999999654 4566789999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ......... .....+.. +..+..++.+++.+||..+|++||++.|+++
T Consensus 212 ~~----~~~~~~~~~----~~~~~~~~------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 212 DR----LAAMFYIGA----HRGLMPRL------------PDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred Ch----HHHHHHhhh----ccCCCCCC------------CCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 21 111100000 00000111 1123456789999999999999999999875
No 284
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.5e-33 Score=305.77 Aligned_cols=250 Identities=22% Similarity=0.330 Sum_probs=195.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.|.....||+|+||.||++....++..||||++........+.+.+|+.+++.++|+|++++++.+. ..+..++|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~-----~~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYL-----VGDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhee-----cCCeEEEE
Confidence 3444577999999999999998889999999987655555677899999999999999999999854 45689999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
|||+++++|.+++... .+++.++..++.||+.|++|||++ +|+||||||+||+++.++++||+|||++..
T Consensus 98 ~e~~~~~~L~~~~~~~-------~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~ 167 (292)
T cd06658 98 MEFLEGGALTDIVTHT-------RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQ 167 (292)
T ss_pred EeCCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhh
Confidence 9999999999998653 277889999999999999999999 999999999999999999999999999875
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
.... ........|+..|+|||.+ .+..++.++|||||||++|||++|+.||.....
T Consensus 168 ~~~~--------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~---- 223 (292)
T cd06658 168 VSKE--------VPKRKSLVGTPYWMAPEVI------------SRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPP---- 223 (292)
T ss_pred cccc--------cccCceeecCccccCHHHH------------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----
Confidence 4221 1112234688999999655 345678899999999999999999999863211
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.... .. ......+.... .......+.+++..||..||++|||+.|+++.
T Consensus 224 ~~~~-~~-----~~~~~~~~~~~----------~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 224 LQAM-RR-----IRDNLPPRVKD----------SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHH-HH-----HHhcCCCcccc----------ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 1111 00 00111111110 01123457789999999999999999999864
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.4e-32 Score=296.66 Aligned_cols=249 Identities=22% Similarity=0.366 Sum_probs=196.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|+||.||+|....+++.+|+|++... .......+.+|++++++++|+|++++++++ ...+..+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENF-----LEDKALM 75 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeE-----ecCCEEE
Confidence 478889999999999999999989999999998643 334467889999999999999999999874 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFg~ 836 (997)
+||||+++++|.+++.+... ..+++..+..++.|++.|++|||++ +|+|+||||+||+++.+ +.+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~ 148 (256)
T cd08220 76 IVMEYAPGGTLAEYIQKRCN----SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGI 148 (256)
T ss_pred EEEecCCCCCHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCC
Confidence 99999999999999987542 2378889999999999999999999 99999999999999855 4689999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... .......|+..|+|||.+. +..++.++||||||+++|+|++|+.||....
T Consensus 149 ~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~-- 205 (256)
T cd08220 149 SKILSSK---------SKAYTVVGTPCYISPELCE------------GKPYNQKSDIWALGCVLYELASLKRAFEAAN-- 205 (256)
T ss_pred ceecCCC---------ccccccccCCcccCchhcc------------CCCCCcccchHHHHHHHHHHHhCCCCcccCc--
Confidence 9765221 1122346788999996553 4567889999999999999999999986431
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
............ .. +.+..+...+.+++..||..+|++|||+.|+++
T Consensus 206 ---~~~~~~~~~~~~-----~~------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 206 ---LPALVLKIMSGT-----FA------------PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred ---hHHHHHHHHhcC-----CC------------CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111111110000 00 001123456789999999999999999999986
No 286
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=7.1e-33 Score=299.24 Aligned_cols=252 Identities=29% Similarity=0.530 Sum_probs=196.7
Q ss_pred CccCCcccccCcceEEEEEECCCC----cEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENG----TFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~----~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+++.+.||+|+||.||+|++...+ ..||+|+++..... ..+.+..|+++++.++|+||+++++++. ..+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~ 75 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCT-----EEEP 75 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEc-----CCCe
Confidence 456789999999999999998665 88999999754433 5678899999999999999999999854 3468
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+++|||+++++|.+++...... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 76 ~~~i~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 76 LMIVMEYMEGGDLLDYLRKNRPK----ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eEEEEeccCCCCHHHHHHhhhhc----cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 99999999999999999875421 178999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
.++......... .....+++.|+|||.+ .+..++.++||||+||++|||++ |+.||...
T Consensus 149 ~~~~~~~~~~~~-------~~~~~~~~~y~~Pe~~------------~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~- 208 (258)
T smart00219 149 LSRDLYDDDYYK-------KKGGKLPIRWMAPESL------------KDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM- 208 (258)
T ss_pred Cceecccccccc-------cccCCCcccccChHHh------------ccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC-
Confidence 998763321110 1122367899999654 34668899999999999999999 78887642
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
...+.......... ...+..++.++.+++.+|+..+|++|||+.|+++.|
T Consensus 209 ----~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 209 ----SNEEVLEYLKKGYR-----------------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CHHHHHHHHhcCCC-----------------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 11111111100000 001112456788999999999999999999998764
No 287
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.7e-33 Score=317.30 Aligned_cols=269 Identities=22% Similarity=0.228 Sum_probs=193.4
Q ss_pred hhcCccCCcccccCcceEEEEEEC--CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG--ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..+|.+.+.||+|+||.||+|... ..+.+||+|.+... ....+|++++++++||||+++++++ .....
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~-----~~~~~ 160 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAY-----RWKST 160 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeE-----eeCCE
Confidence 357999999999999999999764 34578999987532 2346799999999999999999884 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++|||++. ++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 161 ~~lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 161 VCMVMPKYK-CDLFTYVDRSG------PLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred EEEEehhcC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 999999994 68999985433 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+...... .........||+.|+|||++. +..++.++|||||||++|||++|+.||.....
T Consensus 231 ~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DvwslGvil~el~~g~~pf~~~~~ 292 (392)
T PHA03207 231 AACKLDAHP------DTPQCYGWSGTLETNSPELLA------------LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQV 292 (392)
T ss_pred cccccCccc------ccccccccccccCccCHhHhc------------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCC
Confidence 997653211 111223457999999996553 56788999999999999999999999875432
Q ss_pred CC--ccHHHHHHhhc--chhhhhhcC----ccccc---ccccchhhh---hHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 916 GG--LTLHEFCKMAL--PEKVMETVD----PSLLL---AWSDGRRRA---KVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 916 ~~--~~~~~~~~~~~--~~~~~~~~d----~~~~~---~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
.. ..+....+... +........ +.+.. ........+ .......++.+++.+|+..||++|||+.|+
T Consensus 293 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~ 372 (392)
T PHA03207 293 KSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDI 372 (392)
T ss_pred CCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHH
Confidence 21 11111111100 000000000 00000 000000000 001124567789999999999999999999
Q ss_pred HHH
Q 001908 982 LAK 984 (997)
Q Consensus 982 l~~ 984 (997)
+..
T Consensus 373 l~~ 375 (392)
T PHA03207 373 LSL 375 (392)
T ss_pred hhC
Confidence 864
No 288
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.7e-32 Score=299.45 Aligned_cols=260 Identities=22% Similarity=0.379 Sum_probs=198.7
Q ss_pred hcCccCCcccccCcceEEEEEECC-----CCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGE-----NGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
++|+..+.||+|+||.||+|+.+. ..+.||+|.+...... ..+.+.+|++++++++|+||+++++++. .
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~ 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCR-----E 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEEC-----C
Confidence 578889999999999999999753 3467999988654433 4578899999999999999999999853 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCC---cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPE---VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~---~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.+..++||||+++|+|.+++........ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~ 156 (275)
T cd05046 80 AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREV 156 (275)
T ss_pred CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcE
Confidence 4578999999999999999986552211 12478999999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRR 908 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~ 908 (997)
|++|||++........ .......++..|+|||.+ .+..++.++|||||||++|+|++ |..
T Consensus 157 ~l~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Di~slG~~l~~l~~~~~~ 217 (275)
T cd05046 157 KVSLLSLSKDVYNSEY-------YKLRNALIPLRWLAPEAV------------QEDDFSTKSDVWSFGVLMWEVFTQGEL 217 (275)
T ss_pred EEcccccccccCcccc-------cccCCceeEEeecChhhh------------ccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999875422111 112223467789999654 34567889999999999999999 788
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
||..... .............. ..+..++..+.+++.+||..+|++||++.|+++.|.
T Consensus 218 p~~~~~~-----~~~~~~~~~~~~~~----------------~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 218 PFYGLSD-----EEVLNRLQAGKLEL----------------PVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred Cccccch-----HHHHHHHHcCCcCC----------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 8863321 11111110000000 001123557889999999999999999999999875
No 289
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.6e-32 Score=299.96 Aligned_cols=250 Identities=24% Similarity=0.367 Sum_probs=195.9
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcC---CCCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTR---HRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~ 755 (997)
.|+..+.||+|+||.||+|.+..+++.||+|+++.. .......+.+|++++++++ |||++++++++. ....
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~-----~~~~ 76 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYL-----KGPR 76 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeee-----eCCE
Confidence 477889999999999999999889999999998643 3344567889999999986 999999999854 3558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.++++.. .+++..++.++.|++.|++|||+. +|+|+||+|+||+++.++.++++|||
T Consensus 77 ~~lv~e~~~~~~L~~~~~~~-------~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 77 LWIIMEYAEGGSVRTLMKAG-------PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred EEEEEecCCCCcHHHHHHcc-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 89999999999999998754 378899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+....... .......|+..|+|||.+.. +..++.++|||||||++|+|++|..||.....
T Consensus 147 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~ 207 (277)
T cd06917 147 VAALLNQNS--------SKRSTFVGTPYWMAPEVITE-----------GKYYDTKADIWSLGITIYEMATGNPPYSDVDA 207 (277)
T ss_pred ceeecCCCc--------cccccccCCcceeCHHHhcc-----------CCccccchhHHHHHHHHHHHHhCCCCCCCCCh
Confidence 997653211 11223468889999976531 34568899999999999999999999864311
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
......... ...+.+.. ...+.++.+++.+||+.||++||++.|+++.
T Consensus 208 -----~~~~~~~~~-----~~~~~~~~-----------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 208 -----FRAMMLIPK-----SKPPRLED-----------NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred -----hhhhhcccc-----CCCCCCCc-----------ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111100000 00011100 0134578899999999999999999999763
No 290
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-34 Score=328.53 Aligned_cols=214 Identities=26% Similarity=0.341 Sum_probs=183.9
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
..++.-..++|.+.+.||+|+||.|..++.+.+++.||+|++.+. ......-|..|-++|..-+.+.|+.+.-.
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyA--- 143 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYA--- 143 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHH---
Confidence 345555668999999999999999999999999999999999753 23345678899999999999999988655
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
|+++.++|+|||||+||+|-..+.+.. .++..-++.++..|+-||+-+|+. |+|||||||+|||+|..|
T Consensus 144 --FQD~~~LYlVMdY~pGGDlltLlSk~~------~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~G 212 (1317)
T KOG0612|consen 144 --FQDERYLYLVMDYMPGGDLLTLLSKFD------RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSG 212 (1317)
T ss_pred --hcCccceEEEEecccCchHHHHHhhcC------CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccC
Confidence 888999999999999999999999876 367777888999999999999999 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
++|++|||.+..+..+ ....+...+|||.|++||++....+ ..+.|++.+|+||+||++|||+.|.
T Consensus 213 HikLADFGsClkm~~d-------G~V~s~~aVGTPDYISPEvLqs~~~-------~~g~yG~ecDwWSlGV~~YEMlyG~ 278 (1317)
T KOG0612|consen 213 HIKLADFGSCLKMDAD-------GTVRSSVAVGTPDYISPEVLQSQGD-------GKGEYGRECDWWSLGVFMYEMLYGE 278 (1317)
T ss_pred cEeeccchhHHhcCCC-------CcEEeccccCCCCccCHHHHHhhcC-------CccccCCccchhhhHHHHHHHHcCC
Confidence 9999999999876321 2223445689999999999986432 1378999999999999999999999
Q ss_pred CCCCc
Q 001908 908 RPTNC 912 (997)
Q Consensus 908 ~P~~~ 912 (997)
.||+.
T Consensus 279 TPFYa 283 (1317)
T KOG0612|consen 279 TPFYA 283 (1317)
T ss_pred CcchH
Confidence 99984
No 291
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=6.4e-33 Score=299.06 Aligned_cols=247 Identities=31% Similarity=0.448 Sum_probs=193.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|++++++++|||++++++++.. +..++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------~~~~~ 75 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILH------NGLYI 75 (254)
T ss_pred HHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcC------CCcEE
Confidence 5789999999999999999976 68889999986432 33678899999999999999999998532 24699
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+++++|.+++..... ..+++..++.++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~ 148 (254)
T cd05083 76 VMELMSKGNLVNFLRTRGR----ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLAR 148 (254)
T ss_pred EEECCCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccce
Confidence 9999999999999986542 2478889999999999999999998 99999999999999999999999999986
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCC
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGG 917 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~ 917 (997)
..... ......+..|+|||.+ .++.++.++|||||||++|||++ |+.||....
T Consensus 149 ~~~~~-----------~~~~~~~~~y~~pe~~------------~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~--- 202 (254)
T cd05083 149 VGSMG-----------VDNSKLPVKWTAPEAL------------KHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMS--- 202 (254)
T ss_pred ecccc-----------CCCCCCCceecCHHHh------------ccCCcCchhhHHHHHHHHHHHHhCCCCCCccCC---
Confidence 53110 1112345679999644 45678899999999999999998 999986431
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
..+........ ..+ ..+..++..+.+++.+||+.+|++||+++++++.|++
T Consensus 203 --~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 203 --LKEVKECVEKG-----YRM------------EPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred --HHHHHHHHhCC-----CCC------------CCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 11211111000 000 0011235677899999999999999999999998864
No 292
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-34 Score=299.87 Aligned_cols=251 Identities=24% Similarity=0.321 Sum_probs=198.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..+.|+..++||+|+||+||.++.+.+|+.||.|.+.+. ......-...|-+++.+++.+.||.+--. |+.+
T Consensus 183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA-----feTk 257 (591)
T KOG0986|consen 183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA-----FETK 257 (591)
T ss_pred cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee-----ecCC
Confidence 346788999999999999999999999999999988532 23334567889999999999988876543 7788
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+.+|+|+..|.||+|.-+|...++ ..+++..++.+|.+|+.||++||.. +||+||+||+|||+|++|+++|+|
T Consensus 258 d~LClVLtlMNGGDLkfHiyn~g~----~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISD 330 (591)
T KOG0986|consen 258 DALCLVLTLMNGGDLKFHIYNHGN----PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISD 330 (591)
T ss_pred CceEEEEEeecCCceeEEeeccCC----CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeec
Confidence 899999999999999999987763 3589999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
.|+|..+.. .......+||.+|||||++++ +.|+...|+||+||++|||+.|+.||...
T Consensus 331 LGLAvei~~---------g~~~~~rvGT~GYMAPEvl~n------------e~Y~~s~Dwf~lGCllYemi~G~sPFr~~ 389 (591)
T KOG0986|consen 331 LGLAVEIPE---------GKPIRGRVGTVGYMAPEVLQN------------EVYDFSPDWFSLGCLLYEMIAGHSPFRQR 389 (591)
T ss_pred cceEEecCC---------CCccccccCcccccCHHHHcC------------CcccCCccHHHHHhHHHHHHcccCchhhh
Confidence 999987632 223344589999999987764 56999999999999999999999998732
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
-+ +...+.+|......- ...++...++..++....+..||++|...+
T Consensus 390 Ke--------------Kvk~eEvdrr~~~~~-----~ey~~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 390 KE--------------KVKREEVDRRTLEDP-----EEYSDKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hh--------------hhhHHHHHHHHhcch-----hhcccccCHHHHHHHHHHHccCHHHhccCC
Confidence 11 111112222222110 011223345567788899999999997543
No 293
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.6e-32 Score=303.12 Aligned_cols=277 Identities=20% Similarity=0.292 Sum_probs=197.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|+..+.||+|+||.||+|.+..+++.||+|+++... ......+.+|+++++++ +|+||+++++++...+......
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 36888999999999999999999899999999986432 22345778899999999 4699999999876543333445
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDF 834 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DF 834 (997)
.++||||+++ +|.+++...... ....+++..++.++.||+.||.|||++ +|+||||||+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRG-PGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhccc-CCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeec
Confidence 8999999975 899988765422 123578999999999999999999999 9999999999999998 899999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++...... .......+++.|+|||.+.. ...++.++|||||||++|||++|..||....
T Consensus 156 g~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~ 216 (295)
T cd07837 156 GLGRAFSIPV--------KSYTHEIVTLWYRAPEVLLG-----------STHYSTPVDIWSVGCIFAEMSRKQPLFPGDS 216 (295)
T ss_pred ccceecCCCc--------cccCCcccccCCCChHHhhC-----------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9987542211 11122346788999976532 2457889999999999999999999987432
Q ss_pred CCCccHHHHHHhh----cch-hhh-hhcCccc---ccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA----LPE-KVM-ETVDPSL---LLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~----~~~-~~~-~~~d~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+..... .+. ... ....... ...+..............++.+++.+||..||++||++.|++.
T Consensus 217 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 217 ----ELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred ----HHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 122211110 000 000 0000000 0000000000111234567889999999999999999999875
No 294
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=1.1e-32 Score=304.19 Aligned_cols=249 Identities=22% Similarity=0.331 Sum_probs=194.4
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
|....+||+|+||.||+|....+++.||+|++........+.+.+|+.+++.++|||++++++++. ..+..++|+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~iv~ 97 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYL-----VGEELWVLM 97 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhee-----eCCeEEEEE
Confidence 444568999999999999998889999999987544445567889999999999999999999854 456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++++|.+++... .+++..++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 98 e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~ 167 (297)
T cd06659 98 EFLQGGALTDIVSQT-------RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 167 (297)
T ss_pred ecCCCCCHHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhc
Confidence 999999999988653 378899999999999999999999 9999999999999999999999999998754
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.... .......|+..|+|||.+. +..++.++|||||||++|||++|+.||..... .
T Consensus 168 ~~~~--------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~----~ 223 (297)
T cd06659 168 SKDV--------PKRKSLVGTPYWMAPEVIS------------RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP----V 223 (297)
T ss_pred cccc--------ccccceecCccccCHHHHc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----H
Confidence 2211 1122356889999996553 45678899999999999999999999863211 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... ..... ...+... ........+.+++.+||..+|++||++.++++.
T Consensus 224 ~~~-~~~~~-----~~~~~~~----------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 224 QAM-KRLRD-----SPPPKLK----------NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred HHH-HHHhc-----cCCCCcc----------ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 111 11000 0000000 001123457789999999999999999999873
No 295
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=2.3e-32 Score=297.22 Aligned_cols=256 Identities=22% Similarity=0.354 Sum_probs=197.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc------hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ------KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+|+..+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++|+||+++++++ ...
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-----~~~ 75 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGAT-----CED 75 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhcee-----ccC
Confidence 4788899999999999999998899999999986432 22356889999999999999999999985 445
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVS 832 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~ 832 (997)
+..++|+||+++++|.+++.+.. .+++..+..++.|++.|++|||++ +++|+||||+||+++.++ .+||+
T Consensus 76 ~~~~~v~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~ 146 (268)
T cd06630 76 SHFNLFVEWMAGGSVSHLLSKYG------AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIA 146 (268)
T ss_pred CeEEEEEeccCCCcHHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEc
Confidence 68999999999999999997654 478889999999999999999999 999999999999998776 69999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+........ ..........++..|+|||.+. +..++.++||||+||++|+|++|..||..
T Consensus 147 dfg~~~~~~~~~~----~~~~~~~~~~~~~~~~~PE~~~------------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~ 210 (268)
T cd06630 147 DFGAAARLAAKGT----GAGEFQGQLLGTIAFMAPEVLR------------GEQYGRSCDVWSVGCVIIEMATAKPPWNA 210 (268)
T ss_pred ccccccccccccc----cCCccccccccccceeCHhHhc------------cCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 9999977633211 1111223346889999996553 45678899999999999999999999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... .......... .... ...+.....++.+++.+|+..+|++||++.|+++
T Consensus 211 ~~~~~--~~~~~~~~~~----~~~~------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 211 EKHSN--HLALIFKIAS----ATTA------------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred CCCcc--hHHHHHHHhc----cCCC------------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 32111 1111000000 0000 0112234567889999999999999999999875
No 296
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.4e-32 Score=301.89 Aligned_cols=270 Identities=21% Similarity=0.300 Sum_probs=196.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|+..+.||+|+||.||+|+++.+++.||+|++.... ....+.+.+|++++++++|+|++++++++. .....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~~~ 75 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFR-----RKRKL 75 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEe-----eCCEE
Confidence 46888999999999999999999889999999986332 223456789999999999999999999854 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++++++..++.... .+++..++.++.|++.||+|||+. +++||||||+||+++.++++||+|||.
T Consensus 76 ~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~ 146 (286)
T cd07847 76 HLVFEYCDHTVLNELEKNPR------GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGF 146 (286)
T ss_pred EEEEeccCccHHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECcccc
Confidence 99999999988888776543 378999999999999999999998 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+....... .......++..|+|||.+.. ...++.++|||||||++|||++|+.||......
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~ 207 (286)
T cd07847 147 ARILTGPG--------DDYTDYVATRWYRAPELLVG-----------DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV 207 (286)
T ss_pred ceecCCCc--------ccccCcccccccCCHHHHhC-----------CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChH
Confidence 97652211 01123457889999976532 245788999999999999999999999743221
Q ss_pred CccHHHHHHhhcc---hhhhhhcCccc--ccc-cccch----hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALP---EKVMETVDPSL--LLA-WSDGR----RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~---~~~~~~~d~~~--~~~-~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..... ..... ....+..+... ... ..... ...........+.+++.+||..+|++||++.|++.
T Consensus 208 ~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 208 D-QLYLI-RKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred H-HHHHH-HHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 1 01110 00000 00001110000 000 00000 00011123467889999999999999999999875
No 297
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=1.4e-32 Score=302.09 Aligned_cols=271 Identities=21% Similarity=0.268 Sum_probs=198.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++|+|++++++++ ......+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~~~ 75 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVF-----PHGSGFV 75 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEE-----ecCCeeE
Confidence 4788899999999999999998899999999987433 33456789999999999999999999985 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+ +++|.+++.... ..+++.+++.++.||++|++|||+. +++|+||||+||+++.++.++++|||.+
T Consensus 76 ~v~e~~-~~~L~~~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~ 146 (286)
T cd07832 76 LVMEYM-PSDLSEVLRDEE-----RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLA 146 (286)
T ss_pred EEeccc-CCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeec
Confidence 999999 999999987644 2488999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... ........|+..|+|||.+.. ...++.++||||+||++|||++|.+||..... .
T Consensus 147 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~-~ 207 (286)
T cd07832 147 RLFSEEE-------PRLYSHQVATRWYRAPELLYG-----------ARKYDPGVDLWAVGCIFAELLNGSPLFPGEND-I 207 (286)
T ss_pred ccccCCC-------CCccccccCcccccCceeeec-----------cccCCchhHHHHHHHHHHHHHcCCcCcCCCCH-H
Confidence 7652211 011223468899999976531 23468899999999999999999887753221 1
Q ss_pred ccHHHHHHhh---cchhhhhhcCcccc--cccccchh---hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA---LPEKVMETVDPSLL--LAWSDGRR---RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~---~~~~~~~~~d~~~~--~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... .+..+.+..+.... ..+..... .....+....+.+++.+|+..+|++||+++++++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 208 EQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred HHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 1111111100 00011110000000 00000000 0011133467889999999999999999999975
No 298
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-33 Score=312.19 Aligned_cols=289 Identities=24% Similarity=0.282 Sum_probs=212.2
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~~l 758 (997)
|...+.||+|+||.||+++.+.+|+.||||.++.. ....++.+.+|+++|++++|+|||+++++=.... .-..+...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 45668899999999999999999999999999753 3445678899999999999999999998722111 011345789
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC--CCC--cEEEccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDM--VAHVSDF 834 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~--~~~--~~kl~DF 834 (997)
|||||.+|||+..+.+..+ ...++..+.+.+..+++.||.|||++ +|+||||||.||++. .+| ..||+||
T Consensus 95 vmEyC~gGsL~~~L~~PEN---~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDf 168 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN---AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDF 168 (732)
T ss_pred EEeecCCCcHHHHhcCccc---ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecc
Confidence 9999999999999987653 24589999999999999999999999 999999999999995 333 5799999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.|+.+. .........||..|.+||.... .+.|+..+|.|||||++||++||..||....
T Consensus 169 G~Arel~---------d~s~~~S~vGT~~YLhPel~E~-----------q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 169 GAARELD---------DNSLFTSLVGTEEYLHPELYER-----------QKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cccccCC---------CCCeeeeecCchhhcChHHHhh-----------ccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 9999762 2335566889999999977642 4678889999999999999999999998654
Q ss_pred CCCccHHHHHHh--hcchhhhhhcCcccccccccchhhhhH----HHHHHHHHHHHhhcCCCCCCCCC--CHHHHHHHHH
Q 001908 915 QGGLTLHEFCKM--ALPEKVMETVDPSLLLAWSDGRRRAKV----EECLVTVIRIGVACSMESPIERM--EMRDVLAKLC 986 (997)
Q Consensus 915 ~~~~~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~Rp--s~~evl~~L~ 986 (997)
......+-.... ..+..+....++...+...-....+.+ ......+-+++..++..+|.+|. .+.+..+.+.
T Consensus 229 ~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~ 308 (732)
T KOG4250|consen 229 GPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVD 308 (732)
T ss_pred CccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHH
Confidence 332222211111 111112112222221111111112221 22334566778888999999999 8888888888
Q ss_pred HHHHHhhcc
Q 001908 987 AARQTLVGR 995 (997)
Q Consensus 987 ~~~~~~~~~ 995 (997)
+|....+.+
T Consensus 309 dIL~~~vvh 317 (732)
T KOG4250|consen 309 DILNLKVVH 317 (732)
T ss_pred HHHhhheeE
Confidence 887655443
No 299
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-33 Score=296.16 Aligned_cols=248 Identities=20% Similarity=0.290 Sum_probs=199.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.-|...+.||+|.|++|-+|++--+|.+||||++.+.. .-....+++|+..|+-++|||||++|.+ .......
T Consensus 18 GLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEV-----iDTQTKl 92 (864)
T KOG4717|consen 18 GLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEV-----IDTQTKL 92 (864)
T ss_pred eeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeeh-----hcccceE
Confidence 45788899999999999999998899999999997543 3344678999999999999999999998 5566789
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-CCCcEEEcccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFG 835 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFg 835 (997)
|+|.|.-++|+|.+||-+... .+.+....+++.||+.|+.|+|.. .+||||+||+||.+- .-|-||+.|||
T Consensus 93 yLiLELGD~GDl~DyImKHe~-----Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 93 YLILELGDGGDLFDYIMKHEE-----GLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred EEEEEecCCchHHHHHHhhhc-----cccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 999999999999999987652 377888999999999999999999 899999999998764 56899999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCC-ccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS-VTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~-~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
++-.+ ..+......||+..|-|||++- |..|+ +++||||+|||+|.+++|++||+...
T Consensus 165 FSNkf---------~PG~kL~TsCGSLAYSAPEILL------------GDsYDAPAVDiWSLGVILyMLVCGq~PFqeAN 223 (864)
T KOG4717|consen 165 FSNKF---------QPGKKLTTSCGSLAYSAPEILL------------GDSYDAPAVDIWSLGVILYMLVCGQPPFQEAN 223 (864)
T ss_pred ccccC---------CCcchhhcccchhhccCchhhh------------cCccCCcchhhhHHHHHHHHHHhCCCcccccc
Confidence 98765 3345566789999999996654 55564 57899999999999999999998542
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+.+. +-- -+...+-+ +.....+..++|..|+..||++|.+..+|..
T Consensus 224 DSET-LTm--ImDCKYtv--------------------PshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 224 DSET-LTM--IMDCKYTV--------------------PSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred chhh-hhh--hhcccccC--------------------chhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 2211 000 00011111 1122345568999999999999999999864
No 300
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.2e-32 Score=303.33 Aligned_cols=251 Identities=24% Similarity=0.341 Sum_probs=198.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|.+.+.||+|+||.||+|....+++.||+|++........+.+.+|+.++++++|||++++++++. ..+..++
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~-----~~~~~~l 93 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYL-----VGDELWV 93 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheee-----eCCcEEE
Confidence 67889999999999999999998889999999987555555677899999999999999999999854 3457999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|+||+++++|.+++.+.. +++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||.+.
T Consensus 94 v~e~~~~~~L~~~~~~~~-------l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 94 VMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred EEecCCCCcHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 999999999999997643 67889999999999999999999 99999999999999999999999999887
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......|++.|+|||.+. +..++.++|||||||++|++++|+.||.......
T Consensus 164 ~~~~~~--------~~~~~~~~~~~y~~PE~~~------------~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~- 222 (293)
T cd06647 164 QITPEQ--------SKRSTMVGTPYWMAPEVVT------------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR- 222 (293)
T ss_pred cccccc--------cccccccCChhhcCchhhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhh-
Confidence 542211 1122346888999996543 4567889999999999999999999997432110
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
......... .+. .......+..+.+++.+||..+|++||++.+++..
T Consensus 223 ---~~~~~~~~~------~~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 223 ---ALYLIATNG------TPE----------LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred ---heeehhcCC------CCC----------CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000 000 00111234567899999999999999999999864
No 301
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-32 Score=301.90 Aligned_cols=271 Identities=24% Similarity=0.339 Sum_probs=195.0
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|++|.||+|+...+++.||||+++... ......+.+|++++++++||||+++++++ .+.+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 75 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI-----HTENKLY 75 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhc-----ccCCcEE
Confidence 4788899999999999999999899999999986432 22345788999999999999999999984 4556899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+. ++|.+++..... ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||.+
T Consensus 76 ~v~e~~~-~~l~~~~~~~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~ 147 (284)
T cd07860 76 LVFEFLH-QDLKKFMDASPL----SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLA 147 (284)
T ss_pred EEeeccc-cCHHHHHHhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccch
Confidence 9999995 689999876432 2478999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... .......++..|+|||.+.. ...++.++|||||||++|||+||+.||......
T Consensus 148 ~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~- 207 (284)
T cd07860 148 RAFGVPV--------RTYTHEVVTLWYRAPEILLG-----------CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI- 207 (284)
T ss_pred hhcccCc--------cccccccccccccCCeEEec-----------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH-
Confidence 7552211 11122346789999976532 233578899999999999999999998643211
Q ss_pred ccHHHHHHhh-cch-hhhhhcC--cccccc---cccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA-LPE-KVMETVD--PSLLLA---WSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~-~~~-~~~~~~d--~~~~~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....+..... .+. ..+.... +..... +...............+.+++.+||+.||++|||++|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 208 DQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 1111111110 000 0000000 000000 0000000001123356778999999999999999999875
No 302
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.5e-32 Score=302.83 Aligned_cols=263 Identities=20% Similarity=0.279 Sum_probs=197.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||++..+.+++.||+|.+.... ....+.+.+|+++++.++||||+++++++ ...++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~-----~~~~~ 75 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF-----ETKRH 75 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE-----ecCCE
Confidence 36888999999999999999999999999999986432 23446778999999999999999999884 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||
T Consensus 76 ~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 76 LCMVMEYVEGGDCATLLKNIG------ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 999999999999999997654 478888999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCc-------cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 836 LARFLFARPFDTS-------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 836 ~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
.++.......... ...........++..|+|||.+ .+..++.++|||||||++|||++|..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~vl~el~~g~~ 214 (305)
T cd05609 147 LSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVI------------LRQGYGKPVDWWAMGIILYEFLVGCV 214 (305)
T ss_pred CccccCcCccccccccccccchhhccccCCccCccccCchhc------------cCCCCCchhhHHHHHHHHHHHHhCCC
Confidence 9874211100000 0000111224578899999544 45678899999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
||... ...+........ ....+.. ...++..+.+++.+||+.+|++||++.++.+.++.
T Consensus 215 pf~~~-----~~~~~~~~~~~~---~~~~~~~------------~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 215 PFFGD-----TPEELFGQVISD---DIEWPEG------------DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred CCCCC-----CHHHHHHHHHhc---ccCCCCc------------cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 98632 112211111000 0001110 01235567899999999999999997666555543
No 303
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.1e-32 Score=303.58 Aligned_cols=274 Identities=23% Similarity=0.357 Sum_probs=194.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++++|.+.+.||+|+||.||+|..+.+++.||+|++.... ......+.+|+++++.++|+||+++.+++ ..++.
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~-----~~~~~ 77 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDII-----HTKET 77 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEE-----ecCCe
Confidence 3578999999999999999999998899999999986432 22334677899999999999999999985 34568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ +++.+++..... .+.+..+..++.|++.||+|||+. +|+||||||+||+++.++++||+|||
T Consensus 78 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 78 LTFVFEYMH-TDLAQYMIQHPG-----GLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred EEEEEeccc-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 999999995 688887765431 367778889999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++..... ........++..|+|||.+.. ...++.++|||||||++|||++|+.||.....
T Consensus 149 ~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~ 209 (291)
T cd07870 149 LARAKSIP--------SQTYSSEVVTLWYRPPDVLLG-----------ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSD 209 (291)
T ss_pred cccccCCC--------CCCCCCccccccccCCceeec-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchh
Confidence 98754211 111123356889999976531 23467889999999999999999999974432
Q ss_pred CCccHHHHHHh-hcchh-hhhhc--Cccccccccc---chhhhh---HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKM-ALPEK-VMETV--DPSLLLAWSD---GRRRAK---VEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~-~~~~~-~~~~~--d~~~~~~~~~---~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....+.+.... ..+.. ..... -+.....+.. ...... .......+.+++.+|+..||++|||++|++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 210 VFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred HHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 11111111100 00100 00000 0000000000 000000 0011356779999999999999999999874
No 304
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=2.9e-32 Score=304.09 Aligned_cols=260 Identities=25% Similarity=0.345 Sum_probs=197.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch---hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK---GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|+..+.||+|+||+||+|....+++.||+|.+..... ...+.+.+|+++++.++|+||+++++++ .....
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~ 75 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASF-----QTETY 75 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeee-----ecCCE
Confidence 368889999999999999999998899999999974322 2456788999999999999999999984 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++....+ ..+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++|+|||
T Consensus 76 ~~lv~e~~~~~~L~~~~~~~~~----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 76 LCLVMDYCPGGELFRLLQRQPG----KCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EEEEEEecCCCCHHHHHHhCCC----CccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 9999999999999999986432 2478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCcc---------------------ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhH
Q 001908 836 LARFLFARPFDTSM---------------------ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894 (997)
Q Consensus 836 ~a~~~~~~~~~~~~---------------------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dvw 894 (997)
++............ ..........||..|+|||.+. +..++.++|||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~------------~~~~~~~~Di~ 216 (316)
T cd05574 149 LSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS------------GDGHGSAVDWW 216 (316)
T ss_pred hhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc------------CCCCCchHHHH
Confidence 98765321110000 0011122346889999996654 45678899999
Q ss_pred HHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 895 SLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 895 SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
||||++|+|++|+.||...... ..+. ...+.... + +.....+..+.+++.+||..+|++
T Consensus 217 slG~ll~~l~~g~~pf~~~~~~----~~~~---------~~~~~~~~--~------~~~~~~~~~~~~li~~~l~~~p~~ 275 (316)
T cd05574 217 TLGILLYEMLYGTTPFKGSNRD----ETFS---------NILKKEVT--F------PGSPPVSSSARDLIRKLLVKDPSK 275 (316)
T ss_pred HHHHHHHHHhhCCCCCCCCchH----HHHH---------HHhcCCcc--C------CCccccCHHHHHHHHHHccCCHhH
Confidence 9999999999999998743211 1110 00110000 0 001113567889999999999999
Q ss_pred CCC----HHHHHH
Q 001908 975 RME----MRDVLA 983 (997)
Q Consensus 975 Rps----~~evl~ 983 (997)
||+ +.|+++
T Consensus 276 R~s~~~~~~~ll~ 288 (316)
T cd05574 276 RLGSKRGAAEIKQ 288 (316)
T ss_pred CCCchhhHHHHHc
Confidence 999 666654
No 305
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=279.17 Aligned_cols=254 Identities=20% Similarity=0.288 Sum_probs=192.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.+....||.|+.|.||+++.+.+|...|||.+... ..++.+++...++++..- ++|.||+.+||+. .+..+.
T Consensus 93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi-----~n~dV~ 167 (391)
T KOG0983|consen 93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI-----TNTDVF 167 (391)
T ss_pred HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe-----eCchHH
Confidence 445567899999999999999999999999999744 455567778888877665 4999999999954 344678
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+.||.| ...++..++.-.. ++++.-.=++...+++||.||-+++ +|+|||+||+|||+|+.|++|++|||.+
T Consensus 168 IcMelM-s~C~ekLlkrik~-----piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlCDFGIs 239 (391)
T KOG0983|consen 168 ICMELM-STCAEKLLKRIKG-----PIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLCDFGIS 239 (391)
T ss_pred HHHHHH-HHHHHHHHHHhcC-----CchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEeeccccc
Confidence 889988 3355555554331 3667677788899999999999997 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
-++... .......|-+.|||||.+.... ...|+.++|||||||.++|+.||+.||..-..+.
T Consensus 240 GrlvdS---------kAhtrsAGC~~YMaPERidp~~---------~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdF 301 (391)
T KOG0983|consen 240 GRLVDS---------KAHTRSAGCAAYMAPERIDPPD---------KPKYDIRADVWSLGITLVELATGQYPYKGCKTDF 301 (391)
T ss_pred ceeecc---------cccccccCCccccCccccCCCC---------CCccchhhhhhhhccchhhhhcccCCCCCCCccH
Confidence 876332 2233457889999999997532 4679999999999999999999999997432221
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+... .....|.+.. .....+.+.+++..|+..|+.+||...++++
T Consensus 302 e~ltkv---------ln~ePP~L~~----------~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 302 EVLTKV---------LNEEPPLLPG----------HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred HHHHHH---------HhcCCCCCCc----------ccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 111111 1111122211 1113567789999999999999999998865
No 306
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=2.1e-32 Score=295.58 Aligned_cols=248 Identities=25% Similarity=0.400 Sum_probs=194.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
+|+..+.||+|+||.||+|....+++.||+|++.... +...+.+.+|+++++.++|+||+++++++. ...
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-----~~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTER-----EED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEe-----cCC
Confidence 4777899999999999999998889999999986432 234578899999999999999999999853 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++++||+++++|.+++.... .+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+||
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~ 146 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG------SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADF 146 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccC
Confidence 8999999999999999997653 478889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
|.+....... ......|+..|+|||.+. ... ++.++|||||||++|+|++|+.||...
T Consensus 147 ~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~------------~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~ 205 (258)
T cd06632 147 GMAKQVVEFS---------FAKSFKGSPYWMAPEVIA------------QQGGYGLAADIWSLGCTVLEMATGKPPWSQL 205 (258)
T ss_pred ccceeccccc---------cccccCCCcceeCHHHhc------------CCCCCCchhhhHHHHHHHHHHHhCCCCcccC
Confidence 9987642211 122356888999997553 233 788999999999999999999998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ............ .+. .+......+.+++.+||..+|++||++.++++
T Consensus 206 ~~----~~~~~~~~~~~~-----~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 206 EG----VAAVFKIGRSKE-----LPP------------IPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred cH----HHHHHHHHhccc-----CCC------------cCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 21 111100000000 000 01122456778999999999999999999875
No 307
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.7e-32 Score=296.54 Aligned_cols=240 Identities=25% Similarity=0.443 Sum_probs=186.0
Q ss_pred CcccccCcceEEEEEECCCC----------cEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 685 NMIGQGSFGSVYKGILGENG----------TFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~----------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
+.||+|+||.||+|.+..++ ..||+|++...... ...+.+|++++++++|+||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR------D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec------C
Confidence 46899999999999997666 35888887644333 5788999999999999999999998643 3
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-------
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM------- 827 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~------- 827 (997)
..++||||+++|+|.+++..... .+++..+..++.||+.|++|||++ +|+||||||+||+++.++
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~ 145 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKN-----NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVP 145 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCce
Confidence 57999999999999999987542 378889999999999999999999 999999999999999888
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-C
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-R 906 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g 906 (997)
.+|++|||++..... .....++..|+|||.+... ...++.++|||||||++|||++ |
T Consensus 146 ~~kl~Dfg~a~~~~~------------~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Di~slG~~~~~l~~~~ 203 (259)
T cd05037 146 FIKLSDPGIPITVLS------------REERVERIPWIAPECIRNG----------QASLTIAADKWSFGTTLLEICSNG 203 (259)
T ss_pred eEEeCCCCccccccc------------ccccccCCCccChhhhcCC----------CCCcchhhHHHHHHHHHHHHHhCC
Confidence 899999999976421 1123466789999765421 1367889999999999999999 5
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
..||...... ....... +..... .+ ...++.+++.+||..+|++|||+.|+++.|
T Consensus 204 ~~p~~~~~~~--~~~~~~~-----------~~~~~~---------~~--~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 204 EEPLSTLSSS--EKERFYQ-----------DQHRLP---------MP--DCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCcccCCch--hHHHHHh-----------cCCCCC---------CC--CchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 7777643211 0111100 000000 00 015678999999999999999999999886
No 308
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=2e-32 Score=301.59 Aligned_cols=272 Identities=21% Similarity=0.344 Sum_probs=193.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|++|.||+|+.+.+++.||+|.+.... ......+.+|++++++++|+||+++++++ ...+..+
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII-----HTKKTLT 79 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE-----ecCCeEE
Confidence 57889999999999999999998889999999986432 22234567899999999999999999985 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ ++|.+++..... .+++..++.++.|+++||+|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~-~~L~~~~~~~~~-----~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~ 150 (291)
T cd07844 80 LVFEYLD-TDLKQYMDDCGG-----GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLA 150 (291)
T ss_pred EEEecCC-CCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccc
Confidence 9999997 599999876542 378889999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+...... .......++..|+|||.+.. ...++.++||||+||++|||++|+.||.......
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~ 211 (291)
T cd07844 151 RAKSVPS--------KTYSNEVVTLWYRPPDVLLG-----------STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVE 211 (291)
T ss_pred cccCCCC--------ccccccccccccCCcHHhhc-----------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHH
Confidence 6531110 11112346788999976531 2447889999999999999999999996432111
Q ss_pred ccHHHHHHhh-c--chhhhhhcCc-ccc---c-ccccchhhhhH--HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA-L--PEKVMETVDP-SLL---L-AWSDGRRRAKV--EECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~-~--~~~~~~~~d~-~~~---~-~~~~~~~~~~~--~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....+.. . +.......+. ... . ........... ........+++.+|++.+|++|||+.|+++
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 212 DQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred HHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 1111111100 0 0000000000 000 0 00000000000 001146679999999999999999999875
No 309
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.8e-32 Score=298.21 Aligned_cols=249 Identities=21% Similarity=0.315 Sum_probs=196.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.|...+.||+|++|.||+|....+++.||+|+++.......+.+.+|+.+++.++|+||+++++++. ..+..++|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~-----~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYL-----VGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEE-----cCCeEEEE
Confidence 4556689999999999999998889999999987555555677889999999999999999999854 45688999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+||+++++|.+++... .+++..+..++.|++.|++|||+. +|+||||+|+||+++.++.++++|||.+..
T Consensus 95 ~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~ 164 (285)
T cd06648 95 MEFLEGGALTDIVTHT-------RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQ 164 (285)
T ss_pred EeccCCCCHHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchh
Confidence 9999999999999873 278889999999999999999999 999999999999999999999999998875
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
.... ........|++.|+|||.+ .+..++.++|||||||++|||++|+.||....
T Consensus 165 ~~~~--------~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~----- 219 (285)
T cd06648 165 VSKE--------VPRRKSLVGTPYWMAPEVI------------SRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEP----- 219 (285)
T ss_pred hccC--------CcccccccCCccccCHHHh------------cCCCCCCcccHHHHHHHHHHHHhCCCCCcCCC-----
Confidence 4221 1112234588999999654 35668889999999999999999999986321
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+..... .....+... .....+..+.+++.+||..+|++||++.++++
T Consensus 220 ~~~~~~~~-----~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 220 PLQAMKRI-----RDNLPPKLK----------NLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHHHHHH-----HhcCCCCCc----------ccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 11111111 000011110 01113457889999999999999999999985
No 310
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.6e-32 Score=295.93 Aligned_cols=256 Identities=23% Similarity=0.366 Sum_probs=194.8
Q ss_pred cCccCCcccccCcceEEEEEECC-CCcEEEEEEeccc----------chhhHHHHHHHHHHHhh-cCCCCcceEEeeeec
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGE-NGTFVAVKILNLM----------QKGALKSFVAECEVLRN-TRHRNLIKIITVCSS 747 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~ 747 (997)
+|++.+.||+|+||.||+|.+.. +++.+|+|.+... ......++..|++++.+ ++|+||+++++++.
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~- 79 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFL- 79 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEc-
Confidence 47888999999999999999986 6789999988522 22334567788888865 79999999999853
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
..+..++||||+++++|.+++...... ...+++..+++++.|++.|+.|||+.. +++|+||||+||+++.++
T Consensus 80 ----~~~~~~lv~e~~~~~~l~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~--~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 80 ----ENDRLYIVMDLIEGAPLGEHFNSLKEK--KQRFTEERIWNIFVQMVLALRYLHKEK--RIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred ----cCCeEEEEEecCCCCcHHHHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHhccCC--ceeecCCCHHHEEECCCC
Confidence 456899999999999999988653211 124788899999999999999999631 899999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+|++|||.+....... ......|+..|+|||.+ .+..++.++||||||+++|||++|+
T Consensus 152 ~~~l~dfg~~~~~~~~~---------~~~~~~~~~~~~~Pe~~------------~~~~~~~~~Dv~slG~ll~~l~~g~ 210 (269)
T cd08528 152 KVTITDFGLAKQKQPES---------KLTSVVGTILYSCPEIV------------KNEPYGEKADVWAFGCILYQMCTLQ 210 (269)
T ss_pred cEEEecccceeeccccc---------ccccccCcccCcChhhh------------cCCCCchHHHHHHHHHHHHHHHhCC
Confidence 99999999997642211 22345688899999654 3566889999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.||... .............. .+.. .......+.+++.+||..||++||++.|+.++++
T Consensus 211 ~p~~~~-----~~~~~~~~~~~~~~----~~~~------------~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 211 PPFYST-----NMLSLATKIVEAVY----EPLP------------EGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred Cccccc-----CHHHHHHHHhhccC----CcCC------------cccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 998632 11111111100000 0000 0112456789999999999999999999999875
No 311
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.7e-32 Score=299.87 Aligned_cols=249 Identities=25% Similarity=0.362 Sum_probs=196.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+-|+..+.||+|+||.||+|....++..||+|++... .....+.+.+|++++++++|+||+++++++. ..+..+
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 78 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYL-----KDTKLW 78 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEE-----eCCeEE
Confidence 3477889999999999999999888999999998643 2344567889999999999999999999854 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++... .+++..+..++.|++.|+.|||+. +++|+||||+||+++.++.++++|||++
T Consensus 79 lv~e~~~~~~l~~~i~~~-------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~ 148 (277)
T cd06641 79 IIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 148 (277)
T ss_pred EEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccc
Confidence 999999999999998753 378899999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........++..|+|||.+. +..++.++|||||||++|+|++|..||.....
T Consensus 149 ~~~~~~--------~~~~~~~~~~~~y~~PE~~~------------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-- 206 (277)
T cd06641 149 GQLTDT--------QIKRNTFVGTPFWMAPEVIK------------QSAYDSKADIWSLGITAIELAKGEPPHSELHP-- 206 (277)
T ss_pred eecccc--------hhhhccccCCccccChhhhc------------cCCCCchhhHHHHHHHHHHHHcCCCCCCccch--
Confidence 755221 11122346788999996543 45678899999999999999999999864211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
....... .. ...+. ....++.++.+++.+||..+|.+||++.++++.
T Consensus 207 ---~~~~~~~-~~----~~~~~------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 207 ---MKVLFLI-PK----NNPPT------------LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ---HHHHHHH-hc----CCCCC------------CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 1111100 00 00000 011234567899999999999999999999884
No 312
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=2.1e-32 Score=305.26 Aligned_cols=280 Identities=18% Similarity=0.238 Sum_probs=197.9
Q ss_pred cCccCCcccccCcceEEEEEECC--CCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGE--NGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~--~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.|++.++||+|+||.||+|+... +++.||+|++.... ......+.+|++++++++||||+++++++... ...
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~---~~~ 77 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH---ADK 77 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC---CCc
Confidence 47788999999999999999987 78999999997532 34456778899999999999999999997532 236
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC----CCcEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH----DMVAH 830 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~----~~~~k 830 (997)
..++||||+++ ++.+++....... ...++...++.++.|++.|++|||+. +|+||||||+||+++. ++.+|
T Consensus 78 ~~~lv~e~~~~-~l~~~~~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~k 152 (316)
T cd07842 78 SVYLLFDYAEH-DLWQIIKFHRQAK-RVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVK 152 (316)
T ss_pred eEEEEEeCCCc-CHHHHHHhhccCC-CcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEE
Confidence 89999999964 7877776443211 12578889999999999999999999 9999999999999999 99999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
++|||+++....... .........++..|+|||.+.. ...++.++|||||||++|||++|++||
T Consensus 153 l~Dfg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~~l~~l~~~~~~~ 216 (316)
T cd07842 153 IGDLGLARLFNAPLK-----PLADLDPVVVTIWYRAPELLLG-----------ARHYTKAIDIWAIGCIFAELLTLEPIF 216 (316)
T ss_pred ECCCccccccCCCcc-----cccccCCccccccccCHHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhcCCCC
Confidence 999999986532111 1112233567889999976532 245788999999999999999999999
Q ss_pred CcCcCCCc--------cHHHHHHhhc-c--hhhh------hhcC---cccccccc-cchhhhhHH--HHHHHHHHHHhhc
Q 001908 911 NCMFQGGL--------TLHEFCKMAL-P--EKVM------ETVD---PSLLLAWS-DGRRRAKVE--ECLVTVIRIGVAC 967 (997)
Q Consensus 911 ~~~~~~~~--------~~~~~~~~~~-~--~~~~------~~~d---~~~~~~~~-~~~~~~~~~--~~~~~l~~li~~c 967 (997)
........ .+.+...... + .... +..+ ......+. ......... ....++.+++.+|
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 296 (316)
T cd07842 217 KGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKL 296 (316)
T ss_pred cCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHH
Confidence 75433220 0111111000 0 0000 0000 00000000 000000011 2345688999999
Q ss_pred CCCCCCCCCCHHHHHH
Q 001908 968 SMESPIERMEMRDVLA 983 (997)
Q Consensus 968 l~~dP~~Rps~~evl~ 983 (997)
+..||++|||+.|+++
T Consensus 297 l~~~P~~Rps~~eil~ 312 (316)
T cd07842 297 LEYDPTKRITAEEALE 312 (316)
T ss_pred hcCCcccCcCHHHHhc
Confidence 9999999999999875
No 313
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=4.7e-32 Score=300.99 Aligned_cols=250 Identities=24% Similarity=0.341 Sum_probs=194.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+.|+..+.||+|+||+||+|+...+++.||+|++... .....+.+.+|+++++.++||||+++.++|.. .+.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-----~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-----EHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe-----CCe
Confidence 4588889999999999999999889999999998632 23344678899999999999999999999653 457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ |++.+++..... .+++..+..++.|++.|+.|||+. +|+||||+|+||++++++.+||+|||
T Consensus 90 ~~lv~e~~~-g~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 90 AWLVMEYCL-GSASDILEVHKK-----PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred EEEEHHhhC-CCHHHHHHHccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 899999996 688777764331 378899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++..... .....+++.|+|||++... ....++.++||||||+++|||+||+.||.....
T Consensus 161 ~~~~~~~------------~~~~~~~~~y~aPE~~~~~---------~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~ 219 (307)
T cd06607 161 SASLVSP------------ANSFVGTPYWMAPEVILAM---------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (307)
T ss_pred cceecCC------------CCCccCCccccCceeeecc---------CCCCCCcccchHHHHHHHHHHHcCCCCCCCccH
Confidence 9865411 1124578899999876321 135578899999999999999999999863211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.... .... ....+.. ....+...+.+++.+||..+|++||++.+++..
T Consensus 220 ----~~~~-~~~~-----~~~~~~~-----------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 220 ----MSAL-YHIA-----QNDSPTL-----------SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred ----HHHH-HHHh-----cCCCCCC-----------CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 1110 0000 0000000 012345678899999999999999999999763
No 314
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=5.8e-32 Score=293.24 Aligned_cols=253 Identities=27% Similarity=0.385 Sum_probs=201.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch-hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|++|.||+|+...+++.||+|++..... ...+.+.+|++++++++|+|++++++++. .....+
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFY-----KEGEIS 75 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-----cCCeEE
Confidence 368889999999999999999998899999999875443 45678899999999999999999999854 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
+||||+++++|.+++.... .++...++.++.|+++|++|||+ . +++||||+|+||+++.++.++++|||.
T Consensus 76 lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~ 146 (264)
T cd06623 76 IVLEYMDGGSLADLLKKVG------KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGI 146 (264)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCcc
Confidence 9999999999999998653 47889999999999999999999 8 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+....... .......++..|+|||.+. +..++.++||||||+++|+|+||+.||.....
T Consensus 147 ~~~~~~~~--------~~~~~~~~~~~y~~pE~~~------------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~- 205 (264)
T cd06623 147 SKVLENTL--------DQCNTFVGTVTYMSPERIQ------------GESYSYAADIWSLGLTLLECALGKFPFLPPGQ- 205 (264)
T ss_pred ceecccCC--------CcccceeecccccCHhhhC------------CCCCCchhhHHHHHHHHHHHHhCCCCCccccc-
Confidence 87652211 1112346788999996543 45788899999999999999999999875432
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEE-CLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
....+..... .....+.. ... ++..+.+++.+||+.+|++||++.|+++.
T Consensus 206 -~~~~~~~~~~-----~~~~~~~~------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 206 -PSFFELMQAI-----CDGPPPSL------------PAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -cCHHHHHHHH-----hcCCCCCC------------CcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111111111 11111111 111 35678899999999999999999999874
No 315
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=4.9e-32 Score=295.38 Aligned_cols=257 Identities=25% Similarity=0.423 Sum_probs=195.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc----------hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ----------KGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
+|...+.||+|+||.||+|....+++.||+|+++... ....+.+.+|++++++++|+|++++++++.
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--- 78 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFET--- 78 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEec---
Confidence 4778899999999999999998889999999885311 112346788999999999999999999854
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
..+..++||||+++++|.+++.... .+++..+..++.|++.|+.|||++ +++||||+|+||+++.++.+
T Consensus 79 --~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~ 147 (272)
T cd06629 79 --TEEYLSIFLEYVPGGSIGSCLRTYG------RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGIC 147 (272)
T ss_pred --cCCceEEEEecCCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeE
Confidence 4568999999999999999998753 478889999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
|++|||.++...... .........|+..|+|||.+... ...++.++||||||+++||+++|..|
T Consensus 148 ~l~d~~~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p 211 (272)
T cd06629 148 KISDFGISKKSDDIY------DNDQNMSMQGSVFWMAPEVIHSY----------SQGYSAKVDIWSLGCVVLEMFAGRRP 211 (272)
T ss_pred EEeeccccccccccc------cccccccccCCccccCHHHhccc----------cCCCCccchhHHHHHHHHHHHhCCCC
Confidence 999999987542110 11112334688899999766421 12478899999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|.... ......... .......+++.. ..+++..+.+++.+||..+|++||++.|+++
T Consensus 212 ~~~~~----~~~~~~~~~-~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 212 WSDEE----AIAAMFKLG-NKRSAPPIPPDV------------SMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CcCcc----hHHHHHHhh-ccccCCcCCccc------------cccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 86321 111111100 000000011110 1123567889999999999999999999875
No 316
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.1e-32 Score=295.87 Aligned_cols=262 Identities=23% Similarity=0.308 Sum_probs=201.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||+||+|....++..+|+|++.... ....+.+.+|+++++.++|+|++++++.+. ..+..+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFV-----VGDELW 75 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEe-----eCCEEE
Confidence 47889999999999999999998889999999986432 335678899999999999999999998853 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||+++++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.+
T Consensus 76 iv~e~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~ 149 (267)
T cd06610 76 LVMPYLSGGSLLDIMKSSYP---RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVS 149 (267)
T ss_pred EEEeccCCCcHHHHHHHhcc---cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchH
Confidence 99999999999999986432 12478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
......... .........|+..|+|||.+.. ...++.++|||||||++|||++|+.||.......
T Consensus 150 ~~~~~~~~~----~~~~~~~~~~~~~y~~Pe~~~~-----------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~ 214 (267)
T cd06610 150 ASLADGGDR----TRKVRKTFVGTPCWMAPEVMEQ-----------VHGYDFKADIWSFGITAIELATGAAPYSKYPPMK 214 (267)
T ss_pred HHhccCccc----cccccccccCChhhcChHHHcc-----------ccCcCcccchHhHhHHHHHHHhCCCCccccChhh
Confidence 876432211 0012234568899999976642 1257889999999999999999999987432211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+.+... . ..+..... ......+.++.+++.+||..||++||++.|+++
T Consensus 215 -~~~~~~~----~-----~~~~~~~~-------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 215 -VLMLTLQ----N-----DPPSLETG-------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred -hHHHHhc----C-----CCCCcCCc-------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111100 0 00010000 001233567789999999999999999999875
No 317
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.4e-32 Score=299.78 Aligned_cols=269 Identities=20% Similarity=0.264 Sum_probs=186.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCC---CcEEEEEEecccchhhH-----------HHHHHHHHHHhhcCCCCcceEEe
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLMQKGAL-----------KSFVAECEVLRNTRHRNLIKIIT 743 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~l~~ 743 (997)
.++|.+.+.||+|+||+||+|++..+ +..+|+|+......... .....+...+..++|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 36899999999999999999999766 66778886543221110 11122333455678999999998
Q ss_pred eeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
++.... ......++++|++ ..++.+.+.... ..++..+..++.|++.|++|||+. +|+||||||+||++
T Consensus 91 ~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill 159 (294)
T PHA02882 91 CGSFKR-CRMYYRFILLEKL-VENTKEIFKRIK------CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMV 159 (294)
T ss_pred eeeEec-CCceEEEEEEehh-ccCHHHHHHhhc------cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 754321 1223567888887 347777665432 245677889999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+.++.+||+|||+|+.......... ..........||+.|+|||+ +.+..++.++|||||||++|||
T Consensus 160 ~~~~~~~l~DFGla~~~~~~~~~~~-~~~~~~~~~~gt~~y~ape~------------~~~~~~~~~~DiwSlG~~l~el 226 (294)
T PHA02882 160 DGNNRGYIIDYGIASHFIIHGKHIE-YSKEQKDLHRGTLYYAGLDA------------HNGACVTRRGDLESLGYCMLKW 226 (294)
T ss_pred cCCCcEEEEEcCCceeeccCCcccc-cccccccccCCCccccCHHH------------hCCCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999987632211110 01112233469999999954 4467789999999999999999
Q ss_pred HhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 904 FTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 904 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
++|+.||.........+... .... ......+.. ....++..+.+++..||..+|++||++.++.+
T Consensus 227 ~~g~~P~~~~~~~~~~~~~~-~~~~---~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~ 291 (294)
T PHA02882 227 AGIKLPWKGFGHNGNLIHAA-KCDF---IKRLHEGKI-----------KIKNANKFIYDFIECVTKLSYEEKPDYDALIK 291 (294)
T ss_pred HhCCCCCCccccchHHHHHh-HHHH---HHHhhhhhh-----------ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence 99999997543222111111 0000 000000000 11234567889999999999999999999998
Q ss_pred HH
Q 001908 984 KL 985 (997)
Q Consensus 984 ~L 985 (997)
.+
T Consensus 292 ~~ 293 (294)
T PHA02882 292 IF 293 (294)
T ss_pred hh
Confidence 76
No 318
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.6e-32 Score=302.07 Aligned_cols=244 Identities=25% Similarity=0.318 Sum_probs=194.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|.+..+++.||+|++... .....+.+.+|++++++++||||+++++++ .....
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~ 75 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF-----QDDSN 75 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE-----EcCCe
Confidence 4688999999999999999999989999999998642 233456788999999999999999999984 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... .++...+..++.|++.||+|||+. +|+|+||+|+||+++.++.+||+|||
T Consensus 76 ~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 76 LYLVMEYVPGGELFSHLRKSG------RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 999999999999999998764 478889999999999999999998 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++...... .....|++.|+|||.+. +..++.++||||||+++|+|++|+.||....
T Consensus 147 ~~~~~~~~-----------~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~- 202 (290)
T cd05580 147 FAKRVKGR-----------TYTLCGTPEYLAPEIIL------------SKGYGKAVDWWALGILIYEMLAGYPPFFDDN- 202 (290)
T ss_pred CccccCCC-----------CCCCCCCccccChhhhc------------CCCCCccccHHHHHHHHHHHHhCCCCCCCCC-
Confidence 98765221 22346889999996543 4567889999999999999999999986332
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVL 982 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl 982 (997)
..+........ +..+ +......+.+++.+||..+|++|+ +++|++
T Consensus 203 ----~~~~~~~~~~~------~~~~------------~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 203 ----PIQIYEKILEG------KVRF------------PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ----HHHHHHHHhcC------CccC------------CccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 11111111000 0000 111245677899999999999999 666665
No 319
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.4e-32 Score=301.27 Aligned_cols=273 Identities=21% Similarity=0.264 Sum_probs=196.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||.||+|+++.+++.+|+|.++... ......+.+|++++++++||||+++++++... .....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~---~~~~~ 81 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS---NLDKI 81 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec---CCCcE
Confidence 57889999999999999999999889999999997432 22234567899999999999999999986532 23689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ ++|.+++..... .+++..++.++.||+.||+|||+. +++|+||||+||+++.++.+||+|||.
T Consensus 82 ~lv~e~~~-~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~ 152 (293)
T cd07843 82 YMVMEYVE-HDLKSLMETMKQ-----PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGL 152 (293)
T ss_pred EEEehhcC-cCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCc
Confidence 99999996 599999876542 478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++...... .......+++.|+|||.+.. ...++.++||||+||++|||++|+.||......
T Consensus 153 ~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~ 213 (293)
T cd07843 153 AREYGSPL--------KPYTQLVVTLWYRAPELLLG-----------AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI 213 (293)
T ss_pred eeeccCCc--------cccccccccccccCchhhcC-----------CccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence 87653211 11123457889999976542 233678999999999999999999998743211
Q ss_pred CccHHHHHHhh---cchhhhhhcC--cccccccccch----hhhhHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA---LPEKVMETVD--PSLLLAWSDGR----RRAKVEE-CLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~---~~~~~~~~~d--~~~~~~~~~~~----~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... ....+....+ ......+.... ....+.. ....+.+++.+||+.+|++|||+.|++.
T Consensus 214 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 214 -DQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred -HHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 0111110000 0000000000 00000000000 0000001 2456789999999999999999999975
No 320
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4.2e-32 Score=294.42 Aligned_cols=258 Identities=27% Similarity=0.397 Sum_probs=198.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccch--hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|+||.||+|....+++.||+|+++.... ...+.+..|++++++++|+||+++++++ ...+..+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~-----~~~~~~~ 75 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVE-----VHREKVY 75 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeE-----ecCCEEE
Confidence 47888999999999999999988899999999875433 3668899999999999999999999984 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||+++++|.+++.... .+++..++.++.|++.|+.|||+. +|+|+||+|+||++++++.+||+|||.+
T Consensus 76 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~ 146 (264)
T cd06626 76 IFMEYCSGGTLEELLEHGR------ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCA 146 (264)
T ss_pred EEEecCCCCcHHHHHhhcC------CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccc
Confidence 9999999999999998653 367788999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
.......... ........++..|+|||.+... ....++.++||||||+++||+++|+.||......
T Consensus 147 ~~~~~~~~~~----~~~~~~~~~~~~~~~PE~~~~~---------~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~- 212 (264)
T cd06626 147 VKLKNNTTTM----GEEVQSLAGTPAYMAPEVITGG---------KGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE- 212 (264)
T ss_pred cccCCCCCcc----cccccCCcCCcCccChhhccCC---------CCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-
Confidence 8763322111 1102235678899999776421 0133788999999999999999999999743211
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ...... .....+.. +........+.+++.+||+.+|++||++.|++.
T Consensus 213 --~-~~~~~~-----~~~~~~~~----------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 213 --F-QIMFHV-----GAGHKPPI----------PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred --H-HHHHHH-----hcCCCCCC----------CcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0 110000 00001111 001112456678999999999999999999874
No 321
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=5.1e-32 Score=292.50 Aligned_cols=250 Identities=22% Similarity=0.332 Sum_probs=195.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|+||.||+|..+.++..||+|.+... .....+.+.+|++++++++|+||+++++++ ...+..+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~-----~~~~~~~ 75 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASF-----QENGRLF 75 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhhee-----ccCCeEE
Confidence 477889999999999999999989999999998643 223446778999999999999999999985 3456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFg~ 836 (997)
+|+||+++++|.+++..... ..+++..+..++.|+++|++|||+. +++|+||||+||++++++ .+|++|||.
T Consensus 76 lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~ 148 (257)
T cd08225 76 IVMEYCDGGDLMKRINRQRG----VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGI 148 (257)
T ss_pred EEEecCCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEeccccc
Confidence 99999999999999976542 2478999999999999999999999 999999999999999886 569999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... ........|++.|+|||.+ .+..++.++|||||||++|||++|+.||...
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~~~ape~~------------~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~--- 205 (257)
T cd08225 149 ARQLNDS--------MELAYTCVGTPYYLSPEIC------------QNRPYNNKTDIWSLGCVLYELCTLKHPFEGN--- 205 (257)
T ss_pred chhccCC--------cccccccCCCccccCHHHH------------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCc---
Confidence 8765221 1112234588899999654 3466888999999999999999999998632
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+......... ..+. ......++.+++.+||..+|++|||+.|+++
T Consensus 206 --~~~~~~~~~~~~~----~~~~-------------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 206 --NLHQLVLKICQGY----FAPI-------------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred --cHHHHHHHHhccc----CCCC-------------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1222222111111 0000 0112346789999999999999999999976
No 322
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=3.1e-32 Score=294.41 Aligned_cols=248 Identities=25% Similarity=0.349 Sum_probs=197.5
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+|++.+.||+|+||.||+|.+..+++.||+|++.... ....+.+.+|++++++++||||++++++ +.+....
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~ 75 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYS-----FQDEENM 75 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHh-----hcCCCeE
Confidence 4788899999999999999998899999999996432 2456788999999999999999999987 4556789
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++|+||+++++|.+++.... .++...+..++.|+++|++|||+. +++|+||||+||++++++.++++|||.
T Consensus 76 ~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~ 146 (258)
T cd05578 76 YLVVDLLLGGDLRYHLSQKV------KFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNI 146 (258)
T ss_pred EEEEeCCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeeccc
Confidence 99999999999999998752 478889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+....... ......|+..|+|||.+. +..++.++||||+|+++|+|++|..||......
T Consensus 147 ~~~~~~~~---------~~~~~~~~~~y~~PE~~~------------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~ 205 (258)
T cd05578 147 ATKVTPDT---------LTTSTSGTPGYMAPEVLC------------RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT 205 (258)
T ss_pred ccccCCCc---------cccccCCChhhcCHHHHc------------ccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc
Confidence 87652211 123356788999996654 455788999999999999999999998754321
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH--HHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM--RDVL 982 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~--~evl 982 (997)
....+...... .. ...+...+..+.+++.+||..||.+||++ +|++
T Consensus 206 --~~~~~~~~~~~------~~------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 206 --IRDQIRAKQET------AD------------VLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --HHHHHHHHhcc------cc------------ccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 11121111100 00 01112234678899999999999999999 6654
No 323
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=3.6e-32 Score=305.58 Aligned_cols=279 Identities=22% Similarity=0.286 Sum_probs=201.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||.||+|....+++.||+|++.... ....+.+.+|++++++++||||+++.+++.... .....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~ 82 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKD 82 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCce
Confidence 368999999999999999999999999999999986432 234567788999999999999999998765432 33457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+. ++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||++++++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHSDQ------PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEEEehhh-hhHHHHhccCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 899999995 69999987644 378899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.++....... ..........|+..|+|||.+.. ...++.++|||||||++|||++|+.||.....
T Consensus 153 ~~~~~~~~~~----~~~~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~ 217 (334)
T cd07855 153 MARGLSSSPT----EHKYFMTEYVATRWYRAPELLLS-----------LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNY 217 (334)
T ss_pred cceeecccCc----CCCcccccccccccccChHHhcC-----------CcccccccchHHHHHHHHHHHcCCCccCCCCh
Confidence 9976532211 11111233468899999976542 24578899999999999999999999974321
Q ss_pred CCccHHHHHHh--hcchhhhhhc-Cccccc---ccccchh---hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKM--ALPEKVMETV-DPSLLL---AWSDGRR---RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~--~~~~~~~~~~-d~~~~~---~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. .+...... ..+....+.. +..... .+..... .......+.++.+++.+||+.+|++||++.+++.
T Consensus 218 ~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 218 VH-QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HH-HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 10 01110000 0000111000 000000 0000000 0011234567899999999999999999999876
No 324
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=5.4e-33 Score=279.36 Aligned_cols=213 Identities=23% Similarity=0.322 Sum_probs=173.0
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCc----EEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGT----FVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~----~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
-...|+..++||+|+||.||+|..+.+.. .+|+|.++.. ..+.....-+|+..++.++|||++.+..++..
T Consensus 22 ~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~--- 98 (438)
T KOG0666|consen 22 DLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS--- 98 (438)
T ss_pred HHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc---
Confidence 34578999999999999999996653433 6899999744 23445677899999999999999999998643
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC----
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---- 826 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~---- 826 (997)
.+..+++++||.+- +|.+.|+-...... ..++...+..|..||+.|+.|||++ =|.|||+||.||++..+
T Consensus 99 -~d~~v~l~fdYAEh-DL~~II~fHr~~~~-~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgper 172 (438)
T KOG0666|consen 99 -HDKKVWLLFDYAEH-DLWHIIKFHRASKA-KQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPER 172 (438)
T ss_pred -cCceEEEEehhhhh-hHHHHHHHhccchh-ccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCcc
Confidence 25689999999965 99999986553222 3588899999999999999999999 79999999999999887
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
|.|||+|||+|+.+..+- ..-......+-|..|+|||.+-. ...|+.+.||||.|||+.||+|-
T Consensus 173 G~VKIaDlGlaR~~~~pl-----kpl~s~d~VVVTiWYRAPELLLG-----------a~hYT~AiDvWAiGCIfaElLtl 236 (438)
T KOG0666|consen 173 GRVKIADLGLARLFNNPL-----KPLASLDPVVVTIWYRAPELLLG-----------ARHYTKAIDVWAIGCIFAELLTL 236 (438)
T ss_pred CeeEeecccHHHHhhccc-----cccccCCceEEEEEecChHHhcc-----------cccccchhhhHHHHHHHHHHHcc
Confidence 899999999999873321 11223345678999999987754 34589999999999999999999
Q ss_pred CCCCCcCc
Q 001908 907 RRPTNCMF 914 (997)
Q Consensus 907 ~~P~~~~~ 914 (997)
.+-|.+..
T Consensus 237 ~PlF~g~E 244 (438)
T KOG0666|consen 237 EPLFKGRE 244 (438)
T ss_pred Cccccchh
Confidence 98887653
No 325
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=8e-32 Score=299.68 Aligned_cols=279 Identities=20% Similarity=0.309 Sum_probs=195.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc---CCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---KGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~ 753 (997)
++|++.++||+|+||.||+|+.+.+++.||||++.... ......+.+|++++++++||||++++++|..... ...
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 47899999999999999999999899999999886332 2223456789999999999999999999765431 123
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||++ +++.+++.... ..+++.+++.++.|++.|++|||+. +++|+||||+||+++.++.+||+|
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~d 162 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSNKN-----VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLAD 162 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECc
Confidence 46799999995 58988887643 1378999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+.......... ........++..|+|||.+.. ...++.++||||||+++|||++|+.||...
T Consensus 163 fg~~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~~l~el~t~~~~~~~~ 227 (310)
T cd07865 163 FGLARAFSLSKNSK----PNRYTNRVVTLWYRPPELLLG-----------ERDYGPPIDMWGAGCIMAEMWTRSPIMQGN 227 (310)
T ss_pred CCCcccccCCcccC----CCCccCcccCccccCcHHhcC-----------CcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence 99998653221110 111223457889999976542 233678999999999999999999998643
Q ss_pred cCCCccHHHHHHhh---cchhhh-hhcCccccc--ccccchhhhhH-----HHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 914 FQGGLTLHEFCKMA---LPEKVM-ETVDPSLLL--AWSDGRRRAKV-----EECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 914 ~~~~~~~~~~~~~~---~~~~~~-~~~d~~~~~--~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
... ......... .+.... ...+..... ........... ......+.+++.+||..||++|||+.|++
T Consensus 228 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l 305 (310)
T cd07865 228 TEQ--HQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTAL 305 (310)
T ss_pred CHH--HHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHh
Confidence 211 111111111 011000 000000000 00000000000 01124567899999999999999999987
Q ss_pred H
Q 001908 983 A 983 (997)
Q Consensus 983 ~ 983 (997)
+
T Consensus 306 ~ 306 (310)
T cd07865 306 N 306 (310)
T ss_pred c
Confidence 5
No 326
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=3e-32 Score=306.53 Aligned_cols=280 Identities=21% Similarity=0.237 Sum_probs=202.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|.+.+.||+|+||+||+|+...+++.||||+++.. .......+.+|+++++.++|+||+++++++..........
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 46799999999999999999999989999999998632 2333456788999999999999999999875433233346
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++|+||+. ++|.+++.... .+++..+..++.|++.|+.|||++ +++||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ------TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 899999995 79999987654 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++...... .......++..|+|||.+.. ...++.++|||||||++|+|++|+.||.....
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~ 214 (337)
T cd07858 154 LARTTSEKG--------DFMTEYVVTRWYRAPELLLN-----------CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY 214 (337)
T ss_pred cccccCCCc--------ccccccccccCccChHHHhc-----------CCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh
Confidence 997652211 11223457889999976542 23478899999999999999999999864311
Q ss_pred CCccHHHHHHhh----cchhhhhhcCcccccc------cccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH-
Q 001908 916 GGLTLHEFCKMA----LPEKVMETVDPSLLLA------WSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK- 984 (997)
Q Consensus 916 ~~~~~~~~~~~~----~~~~~~~~~d~~~~~~------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~- 984 (997)
.......... .++......++..... ............+..++.+++.+||+.+|++|||++|+++.
T Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~ 292 (337)
T cd07858 215 --VHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHP 292 (337)
T ss_pred --HHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCc
Confidence 0001111000 0001100011100000 00000011112345678899999999999999999999876
Q ss_pred -HHHH
Q 001908 985 -LCAA 988 (997)
Q Consensus 985 -L~~~ 988 (997)
++.+
T Consensus 293 ~~~~~ 297 (337)
T cd07858 293 YLASL 297 (337)
T ss_pred chhhh
Confidence 5443
No 327
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=5e-32 Score=306.74 Aligned_cols=275 Identities=21% Similarity=0.227 Sum_probs=198.4
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKG 752 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~ 752 (997)
...++|+..+.||+|+||.||+|+...+++.||+|++.. ........+.+|++++++++|+||+++++++.... +.+
T Consensus 13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 92 (353)
T cd07850 13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEE 92 (353)
T ss_pred hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccc
Confidence 345789999999999999999999998999999999863 23334467788999999999999999999865321 223
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++||||++ ++|.+.+... ++...+..++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 93 ~~~~~lv~e~~~-~~l~~~~~~~--------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~ 160 (353)
T cd07850 93 FQDVYLVMELMD-ANLCQVIQMD--------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKIL 160 (353)
T ss_pred cCcEEEEEeccC-CCHHHHHhhc--------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEc
Confidence 346899999995 5888887642 67788899999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.++..... .......++..|+|||.+ .+..++.++||||+||++|+|++|+.||..
T Consensus 161 Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 161 DFGLARTAGTS---------FMMTPYVVTRYYRAPEVI------------LGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred cCccceeCCCC---------CCCCCCcccccccCHHHH------------hCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 99999764211 112234578899999655 356788999999999999999999999874
Q ss_pred CcCCCccHHHHHHhh--cchhhhhhcCccccccc---------------cc----chhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 913 MFQGGLTLHEFCKMA--LPEKVMETVDPSLLLAW---------------SD----GRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~---------------~~----~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
.... ..+....... .+..+.+..++...... .+ ..........+..+.+++.+|++.|
T Consensus 220 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 298 (353)
T cd07850 220 TDHI-DQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID 298 (353)
T ss_pred CCHH-HHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC
Confidence 3210 0011111000 00111111111000000 00 0000001123556789999999999
Q ss_pred CCCCCCHHHHHHH
Q 001908 972 PIERMEMRDVLAK 984 (997)
Q Consensus 972 P~~Rps~~evl~~ 984 (997)
|++|||+.|+++.
T Consensus 299 P~~R~t~~eiL~~ 311 (353)
T cd07850 299 PEKRISVDDALQH 311 (353)
T ss_pred hhhCcCHHHHhcC
Confidence 9999999999853
No 328
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.4e-32 Score=299.28 Aligned_cols=271 Identities=26% Similarity=0.360 Sum_probs=197.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||.||+|.++.+++.||+|+++.. .....+.+.+|++++++++|+||+++++++. ..+..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~ 75 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFR-----RKGRL 75 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEE-----ECCEE
Confidence 3688899999999999999999989999999998643 2334577899999999999999999999864 35589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++++.+..+..... .+++..+..++.||+.|++|||+. +++|||++|+||++++++.+||+|||.
T Consensus 76 ~iv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~ 146 (288)
T cd07833 76 YLVFEYVERTLLELLEASPG------GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGF 146 (288)
T ss_pred EEEEecCCCCHHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeec
Confidence 99999998877766655432 378889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCC-CCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGS-EASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+........ .......++..|+|||.+. +. .++.++||||||+++|+|++|+.||.....
T Consensus 147 ~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~------------~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~ 207 (288)
T cd07833 147 ARALRARPA-------SPLTDYVATRWYRAPELLV------------GDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSD 207 (288)
T ss_pred ccccCCCcc-------ccccCcccccCCcCCchhc------------CCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 976532111 1222356788999997654 34 678899999999999999999999874321
Q ss_pred CCccHHHHHHh--hcchhhhhhc--Cccccc-ccccch-----hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKM--ALPEKVMETV--DPSLLL-AWSDGR-----RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~--~~~~~~~~~~--d~~~~~-~~~~~~-----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. .+...... ..+....... ++.... .+.+.. ....+..++.++.+++.+||..+|++||+++++++
T Consensus 208 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 208 ID-QLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred HH-HHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 10 00000000 0000000000 111000 000000 00111223677899999999999999999999875
No 329
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=302.82 Aligned_cols=249 Identities=25% Similarity=0.353 Sum_probs=200.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
...|.+.+.||+|.|++|.+|++..++..||+|++++.. ....+.+.+|+++|..++|||||+++.+ ...+..
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v-----~~t~~~ 129 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSV-----IETEAT 129 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeee-----eeecce
Confidence 356888999999999999999999999999999997543 3334568999999999999999999999 445668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
+|+||||+.+|.+.+++.+.+. ........++.|+++|++|+|++ .|||||||++||+++.+.++||+|||
T Consensus 130 lylV~eya~~ge~~~yl~~~gr------~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGR------MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred eEEEEEeccCchhHHHHHhccc------chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccc
Confidence 9999999999999999998873 33478888999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
++..+ .........+|++.|.|||++. +.. .++++|+||+|+++|-|+.|..||+..
T Consensus 201 fS~~~---------~~~~~lqt~cgsppyAaPEl~~------------g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~- 258 (596)
T KOG0586|consen 201 FSTFF---------DYGLMLQTFCGSPPYAAPELFN------------GKKYDGPEVDIWSLGVVLYALVEGSLPFDGQ- 258 (596)
T ss_pred cceee---------cccccccccCCCCCccChHhhc------------CcccCCcceehhhhhhhheeeeecccccCCc-
Confidence 99876 2344556689999999997665 333 367899999999999999999999843
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.+.+.-...+..++ +.+. ....+..+++++++..+|.+|++++++.+.
T Consensus 259 ----~lk~Lr~rvl~gk~----------------rIp~--~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 259 ----NLKELRPRVLRGKY----------------RIPF--YMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ----ccccccchheeeee----------------cccc--eeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 22221111111110 0010 111234589999999999999999999764
No 330
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=283.49 Aligned_cols=241 Identities=27% Similarity=0.345 Sum_probs=194.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|...+.||+|.||.|..++.+.+++.||+|++++. ...++.+-..|-.+|+..+||.+..+--. |+..+.
T Consensus 168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYs-----FQt~dr 242 (516)
T KOG0690|consen 168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYS-----FQTQDR 242 (516)
T ss_pred chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhh-----hccCce
Confidence 6788999999999999999999999999999999743 45556777889999999999998876533 788899
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||..||.|.-++...+ .+++...+.+..+|+.||.|||++ +||+||+|.+|.++|.+|++||+|||
T Consensus 243 lCFVMeyanGGeLf~HLsrer------~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 243 LCFVMEYANGGELFFHLSRER------VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred EEEEEEEccCceEeeehhhhh------cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecc
Confidence 999999999999999988765 467778888899999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.- ...+.....+||||.|.|||++. +..|+.++|+|.+|||+|||.+|+.||.....
T Consensus 314 LCKE~--------I~~g~t~kTFCGTPEYLAPEVle------------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh 373 (516)
T KOG0690|consen 314 LCKEE--------IKYGDTTKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH 373 (516)
T ss_pred cchhc--------ccccceeccccCChhhcCchhhc------------cccccceeehhhhhHHHHHHHhccCcccccch
Confidence 99753 22334556689999999997775 56799999999999999999999999984321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
..+.+.+-+ +.+ .++....++-..++...+..||++|.
T Consensus 374 --~kLFeLIl~-------ed~--------------kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 374 --EKLFELILM-------EDL--------------KFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred --hHHHHHHHh-------hhc--------------cCCccCCHHHHHHHHHHhhcChHhhc
Confidence 112221111 000 01112223445788889999999997
No 331
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.98 E-value=4.5e-32 Score=297.49 Aligned_cols=270 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.+.||+|++|.||+|.++.+|+.||+|++.... ......+.+|++++++++|+|++++++++. ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~-----~~~~~~i 75 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH-----SENKLYL 75 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec-----cCCeEEE
Confidence 567889999999999999998899999999986432 233457888999999999999999999854 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
+|||+ +++|.+++..... ..+++..++.++.|+++||+|||++ +++||||+|+||+++.++.+|++|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~ 147 (283)
T cd07835 76 VFEFL-DLDLKKYMDSSPL----TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLAR 147 (283)
T ss_pred EEecc-CcCHHHHHhhCCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeeccccc
Confidence 99999 4699999876542 2478999999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........++..|+|||.+.. ...++.++|||||||++|||++|+.||...... .
T Consensus 148 ~~~~~--------~~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~ 207 (283)
T cd07835 148 AFGVP--------VRTYTHEVVTLWYRAPEILLG-----------SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-D 207 (283)
T ss_pred ccCCC--------ccccCccccccCCCCCceeec-----------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-H
Confidence 54211 111122346889999975531 234688999999999999999999998643211 0
Q ss_pred cHHHHHHhh-cch-hhhhh--cCcccccccc---cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA-LPE-KVMET--VDPSLLLAWS---DGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~-~~~-~~~~~--~d~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... .+. ..+.. ..+....... .............++.+++.+|++.+|++|||++|+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 208 QLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred HHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 111111110 000 00000 0000000000 00001111123357889999999999999999999975
No 332
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.98 E-value=7.8e-32 Score=295.78 Aligned_cols=272 Identities=22% Similarity=0.326 Sum_probs=197.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+|++.++||+|++|.||+|+...+++.||+|+++... ......+.+|++++++++|+||+++++++. ..+..++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~l 75 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIH-----TENKLML 75 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEe-----eCCcEEE
Confidence 4788999999999999999999899999999987443 233466788999999999999999999854 4558899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||++ ++|.+++..... ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||.+.
T Consensus 76 v~e~~~-~~l~~~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~ 148 (284)
T cd07836 76 VFEYMD-KDLKKYMDTHGV---RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLAR 148 (284)
T ss_pred EEecCC-ccHHHHHHhcCC---CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhh
Confidence 999997 489998876542 12478999999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......++..|+|||.+.. ...++.++|||||||++|+|++|+.||.......
T Consensus 149 ~~~~~~--------~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~- 208 (284)
T cd07836 149 AFGIPV--------NTFSNEVVTLWYRAPDVLLG-----------SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED- 208 (284)
T ss_pred hhcCCc--------cccccccccccccChHHhcC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-
Confidence 542110 11122356889999976532 2346789999999999999999999987542211
Q ss_pred cHHHHHHhh-cc-hhhhh-hcC-cccccccc---cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA-LP-EKVME-TVD-PSLLLAWS---DGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~-~~-~~~~~-~~d-~~~~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... .+ ...++ ..+ +....... +..........+..+.+++.+|++.||.+||++.|+++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 209 QLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred HHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 111111110 00 00000 000 00000000 00001111234567889999999999999999999875
No 333
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=2.8e-32 Score=325.31 Aligned_cols=270 Identities=26% Similarity=0.417 Sum_probs=212.0
Q ss_pred HHHhhcCccCCcccccCcceEEEEEEC----C---CCcEEEEEEecc-cchhhHHHHHHHHHHHhhc-CCCCcceEEeee
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILG----E---NGTFVAVKILNL-MQKGALKSFVAECEVLRNT-RHRNLIKIITVC 745 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~----~---~~~~vAvK~~~~-~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 745 (997)
+...++..+.+.+|+|+||.|++|... . ....||||.++. ....+.+.+..|+++|+.+ +|+||+.++|+|
T Consensus 292 e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 292 EIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred eechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeee
Confidence 333444566679999999999999753 1 145799999973 3345678999999999998 599999999998
Q ss_pred eccCcCCCceEEEEEeeccCCCHHHHhhcCC---------CCCCc-CCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSN---------GQPEV-CDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~---------~~~~~-~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
.. .+..++|+||++.|+|.++++..+ ..... ..+.....+.++.|||.||+||++. +++|||
T Consensus 372 t~-----~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRD 443 (609)
T KOG0200|consen 372 TQ-----DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRD 443 (609)
T ss_pred cc-----CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchh
Confidence 65 568999999999999999999877 11111 2388899999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHH
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYS 895 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwS 895 (997)
+.++|||++++..+||+|||+|+......+... ......-+..|||||.+. +..|+.++||||
T Consensus 444 LAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~-----~~~~~~LP~kWmApEsl~------------~~~ft~kSDVWS 506 (609)
T KOG0200|consen 444 LAARNVLITKNKVIKIADFGLARDHYNKDYYRT-----KSSAGTLPVKWMAPESLF------------DRVFTSKSDVWS 506 (609)
T ss_pred hhhhhEEecCCCEEEEccccceeccCCCCceEe-----cCCCCccceeecCHHHhc------------cCcccccchhhH
Confidence 999999999999999999999997644332211 001101244699996664 477999999999
Q ss_pred HHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 896 LGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 896 lGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
|||++||++| |..||..... .. .+.....++.+..+|..|..+++++|..||+.+|++
T Consensus 507 fGI~L~EifsLG~~PYp~~~~----~~-----------------~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~ 565 (609)
T KOG0200|consen 507 FGILLWEIFTLGGTPYPGIPP----TE-----------------ELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPED 565 (609)
T ss_pred HHHHHHHHhhCCCCCCCCCCc----HH-----------------HHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCccc
Confidence 9999999999 8888864210 01 111122455666778889999999999999999999
Q ss_pred CCCHHHHHHHHHHHHH
Q 001908 975 RMEMRDVLAKLCAARQ 990 (997)
Q Consensus 975 Rps~~evl~~L~~~~~ 990 (997)
||++.|+.+.++...+
T Consensus 566 RP~F~~~~~~~~~~l~ 581 (609)
T KOG0200|consen 566 RPTFSECVEFFEKHLQ 581 (609)
T ss_pred CCCHHHHHHHHHHHHH
Confidence 9999999999999654
No 334
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.98 E-value=2e-31 Score=289.12 Aligned_cols=254 Identities=21% Similarity=0.313 Sum_probs=195.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.+|++.+.||+|+||.||+|+...+++.||+|++... .......+.+|++++++++|+||+++++++... ..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~---~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP---EE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC---CC
Confidence 4788999999999999999999989999999987522 233456888999999999999999999986432 23
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++++||+++++|.+++.... .+++..+++++.|++.|+.|||+. +++|+||||+||+++.++.++|+|
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~d 149 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG------ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGD 149 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECc
Confidence 56889999999999999997653 367888999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.++....... .........++..|+|||.+ .+..++.++|||||||++||+++|+.||...
T Consensus 150 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 212 (264)
T cd06653 150 FGASKRIQTICM-----SGTGIKSVTGTPYWMSPEVI------------SGEGYGRKADVWSVACTVVEMLTEKPPWAEY 212 (264)
T ss_pred cccccccccccc-----cCccccccCCcccccCHhhh------------cCCCCCccccHHHHHHHHHHHHhCCCCCCcc
Confidence 999986522110 11111234688999999654 3566788999999999999999999998632
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ......... ....++.. +....+.+.+++.+||. +|..||++.+++.
T Consensus 213 ~----~~~~~~~~~-----~~~~~~~~------------p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 213 E----AMAAIFKIA-----TQPTKPML------------PDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred C----HHHHHHHHH-----cCCCCCCC------------CcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1 111111100 00011111 11234567899999999 5799999998764
No 335
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.98 E-value=7.8e-32 Score=299.54 Aligned_cols=274 Identities=24% Similarity=0.299 Sum_probs=195.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||.||+|.++.+++.||+|+++... ......+.+|++++++++|+|++++++++... ..+.
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~~~~ 82 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK---HLDS 82 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC---CCCe
Confidence 357999999999999999999999899999999986432 22234567899999999999999999986432 2356
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ ++|.+++.... ..+++.+++.++.|++.|++|||+. +++||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~e~~~-~~l~~~l~~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 83 IFLVMEYCE-QDLASLLDNMP-----TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEEEEecCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 899999995 58998887643 2478999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+....... .......++..|+|||.+.. ...++.++||||+||++|||++|++||.....
T Consensus 154 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DvwslG~il~el~~g~~~f~~~~~ 214 (309)
T cd07845 154 LARTYGLPA--------KPMTPKVVTLWYRAPELLLG-----------CTTYTTAIDMWAVGCILAELLAHKPLLPGKSE 214 (309)
T ss_pred eeeecCCcc--------CCCCcccccccccChhhhcC-----------CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 997653211 11122345788999976542 24478899999999999999999999874321
Q ss_pred CCccHHHHHHhh-cc-hhhhhhcC-ccccccc--ccc---hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMA-LP-EKVMETVD-PSLLLAW--SDG---RRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~-~~-~~~~~~~d-~~~~~~~--~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+....... .+ ...+...+ ......+ ... ..........+.+.+++.+|+..||++|||+.|+++
T Consensus 215 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 215 I-EQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred H-HHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 1 1111111100 00 01100000 0000000 000 000011123456789999999999999999999885
No 336
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.98 E-value=9.5e-32 Score=293.97 Aligned_cols=244 Identities=25% Similarity=0.320 Sum_probs=183.5
Q ss_pred cccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhh---cCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRN---TRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~---l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.||+|+||.||++....+++.||+|++.... ......+.+|..+++. .+|++|+.+++++. ..+..++|
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv 75 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFH-----TPDKLCFI 75 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEe-----cCCeEEEE
Confidence 4899999999999998899999999886322 1222334445444443 47999999988843 45589999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
|||+++|+|.+++.... .+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||++..
T Consensus 76 ~e~~~~~~L~~~i~~~~------~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~ 146 (279)
T cd05633 76 LDLMNGGDLHYHLSQHG------VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (279)
T ss_pred EecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCccee
Confidence 99999999999997654 488999999999999999999999 999999999999999999999999999865
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
... .......|+..|+|||.+.. +..++.++||||+||++|||++|..||.......
T Consensus 147 ~~~----------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-- 203 (279)
T cd05633 147 FSK----------KKPHASVGTHGYMAPEVLQK-----------GTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD-- 203 (279)
T ss_pred ccc----------cCccCcCCCcCccCHHHhcC-----------CCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcC--
Confidence 411 01123468999999975531 3457889999999999999999999997442211
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLAK 984 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 984 (997)
......... ..+.. .+...+.++.+++.+|++.||++|| +++|+++.
T Consensus 204 ~~~~~~~~~------~~~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 204 KHEIDRMTL------TVNVE------------LPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHHhh------cCCcC------------CccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 111111100 00111 1122355778999999999999999 58888763
No 337
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.98 E-value=7.8e-32 Score=303.32 Aligned_cols=279 Identities=21% Similarity=0.294 Sum_probs=199.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.+.||+|+||.||+|.+..+++.||+|++.. ........+.+|+++++++ +|+||+++++++.. ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~---~~~ 81 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKA---END 81 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeecc---CCC
Confidence 45689999999999999999999988899999998853 2233345678899999999 99999999998643 224
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||++ ++|.+++... .+++..++.++.||+.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 82 KDIYLVFEYME-TDLHAVIRAN-------ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred ceEEEEecccc-cCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEee
Confidence 46899999996 5999998764 277888999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+.......... .........|+..|+|||.+.. ...++.++|||||||++|||++|+.||...
T Consensus 151 ~g~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~sDi~slG~~l~el~tg~~pf~~~ 216 (337)
T cd07852 151 FGLARSLSELEENP---ENPVLTDYVATRWYRAPEILLG-----------STRYTKGVDMWSVGCILGEMLLGKPLFPGT 216 (337)
T ss_pred ccchhccccccccc---cCcchhcccccccccCceeeec-----------cccccccchHHHHHHHHHHHHhCCCCCCCC
Confidence 99998763322110 1112233568999999976532 245778999999999999999999998643
Q ss_pred cCCCccHHHHHHhh--cchhhhhhc----Ccccccccccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMA--LPEKVMETV----DPSLLLAWSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~--~~~~~~~~~----d~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.... ......... ......... ...+........ .......++.++.+++.+||+.+|++|||+.++++.
T Consensus 217 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 217 STLN-QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred ChHH-HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 2111 011111100 000000000 000000000000 001111245678999999999999999999999864
No 338
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.98 E-value=1.1e-31 Score=294.38 Aligned_cols=268 Identities=19% Similarity=0.268 Sum_probs=193.2
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.++||+|+||.||+|+...+++.||+|+++.. .........+|+.+++++. |+|++++++++... ..+..++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~l 77 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDR---KTGRLAL 77 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecC---CCCcEEE
Confidence 56788999999999999999989999999998743 2222334567899999885 99999999996532 2257899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||++ |++.+++..... .+++.+++.++.|++.||+|||+. +++||||||+||+++. +.+||+|||.++
T Consensus 78 v~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~ 147 (282)
T cd07831 78 VFELMD-MNLYELIKGRKR-----PLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCR 147 (282)
T ss_pred EEecCC-ccHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEeccccc
Confidence 999996 588888876431 478999999999999999999999 9999999999999999 999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... ......++..|+|||.+. .+..++.++||||+||++|||++|..||......
T Consensus 148 ~~~~~~---------~~~~~~~~~~y~aPE~~~-----------~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~-- 205 (282)
T cd07831 148 GIYSKP---------PYTEYISTRWYRAPECLL-----------TDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL-- 205 (282)
T ss_pred ccccCC---------CcCCCCCCcccCChhHhh-----------cCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--
Confidence 652211 112245788999997543 2345688999999999999999999999643211
Q ss_pred cHHHHHHhhc---chhhhhhcCcccccc--ccc---chhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMAL---PEKVMETVDPSLLLA--WSD---GRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~---~~~~~~~~d~~~~~~--~~~---~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... +..+.....+..... +.. ..........+..+.+++.+||..+|++||++.++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 206 DQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred HHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 1111111110 111111111100000 000 0001112244678899999999999999999999975
No 339
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=283.85 Aligned_cols=275 Identities=24% Similarity=0.384 Sum_probs=225.4
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCC-----cEEEEEEec-ccchhhHHHHHHHHHHHhhcCCCCcceEEee
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENG-----TFVAVKILN-LMQKGALKSFVAECEVLRNTRHRNLIKIITV 744 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~-----~~vAvK~~~-~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~ 744 (997)
.+++.....+++....+-+|.||+||.|.|++.. +.|-+|.++ ..++.+...+..|.-.+..+.|||+..+.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 4455666677888889999999999999887443 345667665 3455667888999999999999999999999
Q ss_pred eeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCC--cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE--VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 745 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~--~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
+.+ +.+..++++.++..|+|..|+...++... ...++..+...+|.|++.|++|||+. +|+|.||.++|++
T Consensus 356 ~ie----~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCv 428 (563)
T KOG1024|consen 356 SIE----DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCV 428 (563)
T ss_pred Eee----ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcce
Confidence 864 45678899999999999999995443221 22467778899999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
||+.-.+|++|=.+++.+++.+++.-.... ..+..||+||.+.+ ..|+.++|||||||++||
T Consensus 429 Idd~LqVkltDsaLSRDLFP~DYhcLGDnE------nRPvkWMslEal~n------------~~yssasDvWsfGVllWE 490 (563)
T KOG1024|consen 429 IDDQLQVKLTDSALSRDLFPGDYHCLGDNE------NRPVKWMSLEALQN------------SHYSSASDVWSFGVLLWE 490 (563)
T ss_pred ehhheeEEeccchhccccCcccccccCCCC------CCcccccCHHHHhh------------hhhcchhhhHHHHHHHHH
Confidence 999999999999999999888776543222 35678999987764 678999999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccc-cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLL-LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
|+| |+.||.+ +||.-. .-.+++++..++.+||++++.+|.-||+.+|++||+++|
T Consensus 491 Lmtlg~~Pyae-----------------------IDPfEm~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 491 LMTLGKLPYAE-----------------------IDPFEMEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred HHhcCCCCccc-----------------------cCHHHHHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 999 8999762 233322 234778888999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 001908 981 VLAKLCAARQTLV 993 (997)
Q Consensus 981 vl~~L~~~~~~~~ 993 (997)
+...|.+..-.+.
T Consensus 548 lv~cLseF~~qlt 560 (563)
T KOG1024|consen 548 LVICLSEFHTQLT 560 (563)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999876653
No 340
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=1.7e-31 Score=290.00 Aligned_cols=251 Identities=22% Similarity=0.285 Sum_probs=190.5
Q ss_pred hHHHHHHhhcCccCCcc--cccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeec
Q 001908 671 YSELSEATNEFSSSNMI--GQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSS 747 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~l--g~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 747 (997)
..+.....++|++.+.+ |+|+||.||+++.+.++..+|+|++....... .|+.....+ +|+|++++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-----~e~~~~~~~~~h~~iv~~~~~~~- 79 (267)
T PHA03390 6 LSELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-----IEPMVHQLMKDNPNFIKLYYSVT- 79 (267)
T ss_pred HHHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-----hhHHHHHHhhcCCCEEEEEEEEe-
Confidence 34555566788887777 99999999999999999999999986432111 122222222 7999999999854
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
..+..++||||+++++|.+++.... .+++..+..++.|+++|+.|||+. +++||||||+||+++.++
T Consensus 80 ----~~~~~~iv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~ 146 (267)
T PHA03390 80 ----TLKGHVLIMDYIKDGDLFDLLKKEG------KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAK 146 (267)
T ss_pred ----cCCeeEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCC
Confidence 3458999999999999999998754 488999999999999999999999 999999999999999998
Q ss_pred -cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 828 -VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 828 -~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
.++|+|||.++.... .....++..|+|||++. +..++.++||||+||++|||++|
T Consensus 147 ~~~~l~dfg~~~~~~~------------~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwslG~il~~l~~g 202 (267)
T PHA03390 147 DRIYLCDYGLCKIIGT------------PSCYDGTLDYFSPEKIK------------GHNYDVSFDWWAVGVLTYELLTG 202 (267)
T ss_pred CeEEEecCccceecCC------------CccCCCCCcccChhhhc------------CCCCCchhhHHHHHHHHHHHHHC
Confidence 999999999875421 11235789999996553 56678899999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-HHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-MRDVLA 983 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl~ 983 (997)
+.||............+.... ... ..........+.+++.+||+.+|.+||+ ++|+++
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~---------~~~----------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 203 KHPFKEDEDEELDLESLLKRQ---------QKK----------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred CCCCCCCCcchhhHHHHHHhh---------ccc----------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 999974432221222221111 000 0011133556789999999999999996 588874
No 341
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.98 E-value=1.7e-31 Score=293.33 Aligned_cols=253 Identities=24% Similarity=0.371 Sum_probs=199.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..+.|+..+.||+|+||.||+|.+..+++.||+|+++.... ..+.+.+|++++++++|+|++++++++.. .+..
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-----~~~~ 90 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLV-----GDEL 90 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEE-----CCEE
Confidence 45678888999999999999999988899999999975544 45678899999999999999999998643 4689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++|+||+++++|.+++.... ..+++..+..++.|++.|++|||.. +|+|+|++|+||+++.++.+||+|||.
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~-----~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~ 162 (286)
T cd06614 91 WVVMEYMDGGSLTDIITQNF-----VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGF 162 (286)
T ss_pred EEEEeccCCCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccch
Confidence 99999999999999998754 2488999999999999999999998 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... ........++..|+|||.+ .+..++.++|||||||++|+|++|+.||.....
T Consensus 163 ~~~~~~~--------~~~~~~~~~~~~y~~PE~~------------~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~- 221 (286)
T cd06614 163 AAQLTKE--------KSKRNSVVGTPYWMAPEVI------------KRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPP- 221 (286)
T ss_pred hhhhccc--------hhhhccccCCcccCCHhHh------------cCCCCCCccccHHHHHHHHHHHhCCCCCCCCCH-
Confidence 8754211 1112234578899999654 356678999999999999999999999863211
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ....... . +. ......++..+.+++.+||+.+|.+||++.+++.
T Consensus 222 ---~~~~-~~~~~~~----~-~~----------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 222 ---LRAL-FLITTKG----I-PP----------LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ---HHHH-HHHHhcC----C-CC----------CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 1111 0000000 0 00 0111224567889999999999999999999975
No 342
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.98 E-value=1.1e-31 Score=295.30 Aligned_cols=258 Identities=22% Similarity=0.309 Sum_probs=190.9
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|...+.||+|+||+||++.+..+++.||+|++... .......+.+|+.++.++. |+||+++++++. .+...+
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~-----~~~~~~ 79 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALF-----REGDCW 79 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEe-----cCCcEE
Confidence 566678999999999999999999999999998643 2344567889999999996 999999999853 355789
Q ss_pred EEEeeccCCCHHHHhh---cCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 758 LVYEYMQNGSLEEWLH---QSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~---~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
++|||++ +++.++.. ... ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~e~~~-~~l~~l~~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~df 152 (288)
T cd06616 80 ICMELMD-ISLDKFYKYVYEVL----KSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDF 152 (288)
T ss_pred EEEeccc-CCHHHHHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeec
Confidence 9999985 46555432 221 124788999999999999999999743 8999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++..... .......|+..|+|||.+.... +..++.++||||+||++|||++|+.||....
T Consensus 153 g~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~---------~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 214 (288)
T cd06616 153 GISGQLVDS---------IAKTRDAGCRPYMAPERIDPSA---------RDGYDVRSDVWSLGITLYEVATGKFPYPKWN 214 (288)
T ss_pred chhHHhccC---------CccccccCccCccCHHHhcccc---------ccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence 999765221 1112335788999998765310 1368889999999999999999999986321
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+........ ..+.... .....++.++.+++.+||..+|++|||+.|+++.
T Consensus 215 ----~~~~~~~~~~~~-----~~~~~~~--------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 215 ----SVFDQLTQVVKG-----DPPILSN--------SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred ----hHHHHHhhhcCC-----CCCcCCC--------cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111111000 0111100 0011245678899999999999999999999763
No 343
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.98 E-value=2e-31 Score=297.09 Aligned_cols=269 Identities=19% Similarity=0.183 Sum_probs=188.7
Q ss_pred CcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCH
Q 001908 691 SFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSL 768 (997)
Q Consensus 691 ~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL 768 (997)
++|.||.++...+++.||||++... .....+.+.+|++++++++|+||+++++++ ...+..+++|||+++|+|
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~-----~~~~~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSF-----IVDSELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhhee-----ecCCeEEEEEeccCCCCH
Confidence 4455666666668999999998743 345567899999999999999999999984 445689999999999999
Q ss_pred HHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCc
Q 001908 769 EEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTS 848 (997)
Q Consensus 769 ~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 848 (997)
.+++...... .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+|++|||.+...........
T Consensus 87 ~~~l~~~~~~----~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 87 EDLLKTHFPE----GLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 9999865321 377888999999999999999999 999999999999999999999999999876643221110
Q ss_pred cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhc
Q 001908 849 METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMAL 928 (997)
Q Consensus 849 ~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~ 928 (997)
..........++..|+|||.+... ...++.++|||||||++|||++|+.||.......... +......
T Consensus 160 -~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~-~~~~~~~ 227 (314)
T cd08216 160 -VVHDFPKSSVKNLPWLSPEVLQQN----------LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLL-EKVRGTV 227 (314)
T ss_pred -ccccccccccccccccCHHHhcCC----------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhccC
Confidence 111122334578899999876521 1347889999999999999999999997542211111 1110000
Q ss_pred chhhh----hhcCcccc--------cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 929 PEKVM----ETVDPSLL--------LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 929 ~~~~~----~~~d~~~~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+.... ........ .................++.+++.+||..||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 228 PCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred ccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 00000 00000000 000000111112233457889999999999999999999976
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.98 E-value=1.7e-31 Score=295.88 Aligned_cols=280 Identities=23% Similarity=0.316 Sum_probs=198.7
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC----
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSID---- 749 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~---- 749 (997)
...++|++.+.||+|+||.||+|..+.+++.||+|+++... ......+.+|++++++++|||++++++++....
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999999889999999997432 233456778999999999999999999875432
Q ss_pred -cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 750 -FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 750 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
..+....++|+||+++ ++.+.+.... ..+++..++.++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~ 154 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL-----VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQ 154 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCc
Confidence 1123478999999965 7877776542 2488999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||.+........ .......++..|+|||.+.. ...++.++||||+||++|||++|++
T Consensus 155 ~kl~dfg~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Di~slG~~~~el~~g~~ 216 (302)
T cd07864 155 IKLADFGLARLYNSEES-------RPYTNKVITLWYRPPELLLG-----------EERYGPAIDVWSCGCILGELFTKKP 216 (302)
T ss_pred EEeCcccccccccCCcc-------cccccceeccCccChHHhcC-----------CCCCCchhHHHHHHHHHHHHHhCCC
Confidence 99999999976522110 11122345778999976532 2346789999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhh---cchhhhhhcCccccccc--ccc---hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMA---LPEKVMETVDPSLLLAW--SDG---RRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~~~~~~--~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
||..... ...+....... .+............... ... .........+..+.+++..||..+|++||++.+
T Consensus 217 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~ 295 (302)
T cd07864 217 IFQANQE-LAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEE 295 (302)
T ss_pred CCCCCCh-HHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHH
Confidence 9874311 11111111110 00000000000000000 000 000111123567899999999999999999999
Q ss_pred HHH
Q 001908 981 VLA 983 (997)
Q Consensus 981 vl~ 983 (997)
++.
T Consensus 296 il~ 298 (302)
T cd07864 296 ALN 298 (302)
T ss_pred Hhc
Confidence 875
No 345
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.98 E-value=1.5e-31 Score=293.84 Aligned_cols=272 Identities=23% Similarity=0.323 Sum_probs=196.6
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.+.||+|+||.||+|+...+++.||+|++... .......+.+|++++++++|+|++++++++... ..+..++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---GKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC---CCCcEEE
Confidence 56788999999999999999988999999999754 233456788999999999999999999996532 1368999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|+||++ ++|.+++.... ..+++..++.++.||++|++|||+. +++|+||||+||++++++.+|++|||.+.
T Consensus 78 v~e~~~-~~l~~~~~~~~-----~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~ 148 (287)
T cd07840 78 VFEYMD-HDLTGLLDSPE-----VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLAR 148 (287)
T ss_pred Eecccc-ccHHHHHhccC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccccee
Confidence 999996 49999887653 2478999999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
....... .......++..|+|||.+.. ...++.++||||||+++|||+||+.||...... .
T Consensus 149 ~~~~~~~-------~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~ 209 (287)
T cd07840 149 PYTKRNS-------ADYTNRVITLWYRPPELLLG-----------ATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-E 209 (287)
T ss_pred eccCCCc-------ccccccccccccCCceeeEc-----------cccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-H
Confidence 6532210 11223356788999975532 234688999999999999999999998743211 1
Q ss_pred cHHHHHHhhc---chhhhhhcCc----cccccc-ccchhhhhHHH-HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMAL---PEKVMETVDP----SLLLAW-SDGRRRAKVEE-CLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~---~~~~~~~~d~----~~~~~~-~~~~~~~~~~~-~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+........ ...+....+. ...... ........... ++.++.+++.+||..+|++||++.++++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 210 QLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred HHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 1111111000 0000000000 000000 00000011111 2667899999999999999999999875
No 346
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.98 E-value=1.6e-31 Score=294.12 Aligned_cols=246 Identities=22% Similarity=0.335 Sum_probs=192.8
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEee
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
...+||+|+||.||++..+.+++.||+|++..........+.+|+.+++.++|+|++++++++. ..+..++||||
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~~~~lv~e~ 98 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWVVMEF 98 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEE-----eCCEEEEEEec
Confidence 3467999999999999999899999999987555555677899999999999999999999854 45689999999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhccc
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~ 842 (997)
+++++|.+++... .+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||.+.....
T Consensus 99 ~~~~~L~~~~~~~-------~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~ 168 (292)
T cd06657 99 LEGGALTDIVTHT-------RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 168 (292)
T ss_pred CCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceeccc
Confidence 9999999988643 268889999999999999999999 999999999999999999999999998875422
Q ss_pred CCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHH
Q 001908 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHE 922 (997)
Q Consensus 843 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~ 922 (997)
. ........|++.|+|||.+ .+..++.++||||+||++|||++|..||.... ..+
T Consensus 169 ~--------~~~~~~~~~~~~y~~pE~~------------~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~-----~~~ 223 (292)
T cd06657 169 E--------VPRRKSLVGTPYWMAPELI------------SRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLK 223 (292)
T ss_pred c--------cccccccccCccccCHHHh------------cCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----HHH
Confidence 1 1112234688999999654 34567889999999999999999999986321 111
Q ss_pred HHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 923 FCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 923 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... .....+... .....+..+.+++.+||..+|.+||++.|+++
T Consensus 224 ~~~~~-----~~~~~~~~~----------~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 224 AMKMI-----RDNLPPKLK----------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHHH-----HhhCCcccC----------CcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 11110 000111100 01122446778999999999999999999986
No 347
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.98 E-value=3.5e-31 Score=291.05 Aligned_cols=273 Identities=24% Similarity=0.348 Sum_probs=195.2
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhc---CCCCcceEEeeeeccCcCCCce
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNT---RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~~~~~~ 755 (997)
|++.+.||+|+||.||+|+++.+++.||+|+++.. .......+.+|+++++++ +|+|++++++++...+......
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 56788999999999999999888999999999732 222335566788877666 5999999999976654333345
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+++|||++ ++|.+++..... ..+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+||+|||
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~----~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK----PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999996 589998876432 1478999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+...... .......++..|+|||.+ .+..++.++|||||||++|||++|++||.....
T Consensus 153 ~~~~~~~~---------~~~~~~~~~~~~~~PE~~------------~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~ 211 (287)
T cd07838 153 LARIYSFE---------MALTSVVVTLWYRAPEVL------------LQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE 211 (287)
T ss_pred cceeccCC---------cccccccccccccChHHh------------ccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh
Confidence 98765211 111223578899999655 356688899999999999999999999874321
Q ss_pred CCccHHHHHHhh-cchhhhhhcCcc-cccccccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMA-LPEKVMETVDPS-LLLAWSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~-~~~~~~~~~d~~-~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+..+.... .+.......... ....+.... ......+....+.+++.+||..||++||++.|+++
T Consensus 212 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 212 -ADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred -HHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 11122221111 000000000000 000000000 01111233467789999999999999999999875
No 348
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.98 E-value=1.5e-31 Score=295.05 Aligned_cols=272 Identities=22% Similarity=0.315 Sum_probs=193.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|++|+||+|+++.+++.||+|++.... ....+.+.+|++++++++|+||+++++++. .....
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 76 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVH-----SEKRL 76 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEe-----cCCeE
Confidence 46889999999999999999998899999999986432 233467889999999999999999999953 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEcccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFG 835 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFg 835 (997)
++||||++ +++.+++..... ...++..+..++.||+.||+|||++ +++||||||+||+++. ++.+||+|||
T Consensus 77 ~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 77 YLVFEYLD-LDLKKHMDSSPD----FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred EEEEeccc-ccHHHHHHhCCC----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 99999995 588888865432 1357788889999999999999999 9999999999999985 5679999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++....... .......+++.|+|||.+.. ...++.++||||+||++|+|+||++||.....
T Consensus 149 ~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~-----------~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~ 209 (294)
T PLN00009 149 LARAFGIPV--------RTFTHEVVTLWYRAPEILLG-----------SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSE 209 (294)
T ss_pred cccccCCCc--------cccccCceeecccCHHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 997542210 11122356889999976532 24578899999999999999999999874321
Q ss_pred CCccHHHHHHh-hc-chhhhhh-cC-ccc---ccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKM-AL-PEKVMET-VD-PSL---LLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~-~~-~~~~~~~-~d-~~~---~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+.+.... .. ....+.. .+ +.. ...+..............++.+++.+|++.+|++||++.++++
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 210 I-DELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred H-HHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 111111100 00 0000000 00 000 0000000000011123456789999999999999999999986
No 349
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=1.5e-33 Score=275.18 Aligned_cols=281 Identities=22% Similarity=0.333 Sum_probs=201.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEec--ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc---CCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---KGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~~ 753 (997)
..|....+||+|.||+||+|+.+.+|++||+|++- ...++-.....+|+++++.+.|+|++.++.+|....- ...
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 35666789999999999999999999999998663 2333444677899999999999999999999866431 123
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...|+||++|+- +|.-.+.... ..++..++.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~-----vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRK-----VRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCcc-----ccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeec
Confidence 458999999955 8988887653 2588999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+....+... ........+-|.+|++||.+-. ...|+++.|||..|||+.||+|+.+-+...
T Consensus 168 FGlar~fs~~~n~----~kprytnrvvTLwYrppEllLG-----------~r~yg~~iDiWgAgCimaeMwtrspimqgn 232 (376)
T KOG0669|consen 168 FGLARAFSTSKNV----VKPRYTNRVVTLWYRPPELLLG-----------DREYGPPIDIWGAGCIMAEMWTRSPIMQGN 232 (376)
T ss_pred cccccceeccccc----CCCCcccceeeeecCCHHHhhc-----------ccccCCcchhHhHHHHHHHHHccCccccCC
Confidence 9999765332211 1112334567999999987654 467899999999999999999998877643
Q ss_pred cCCCc--cHHHHHHhhcchhhhhhcCcccccccc----cchhhhhHHHHH------HHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 914 FQGGL--TLHEFCKMALPEKVMETVDPSLLLAWS----DGRRRAKVEECL------VTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 914 ~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~~~~~~~~------~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
..... .+...+...-++.+.++..-.+....+ ..+.....++.. ++-++++..++..||.+|++++++
T Consensus 233 teqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~a 312 (376)
T KOG0669|consen 233 TEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQA 312 (376)
T ss_pred hHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhh
Confidence 22110 111222222222222222212211110 001111112222 256789999999999999999998
Q ss_pred HH
Q 001908 982 LA 983 (997)
Q Consensus 982 l~ 983 (997)
+.
T Consensus 313 ln 314 (376)
T KOG0669|consen 313 LN 314 (376)
T ss_pred hc
Confidence 64
No 350
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=4.2e-31 Score=296.09 Aligned_cols=284 Identities=20% Similarity=0.256 Sum_probs=195.9
Q ss_pred Cccccc--CcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQG--SFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G--~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
..||+| +||+||+|++..+++.||+|++... .....+.+.+|+.+++.++||||+++++++. ..+..++|+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~-----~~~~~~~v~ 78 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFT-----TGSWLWVIS 78 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEe-----cCCceEEEE
Confidence 456666 8899999999989999999998643 3344578899999999999999999999954 456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||++++++.+++...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||+.+...
T Consensus 79 e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 79 PFMAYGSANSLLKTYFPE----GMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSL 151 (328)
T ss_pred ecccCCCHHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhh
Confidence 999999999999875421 378889999999999999999998 9999999999999999999999999876543
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
........ ..........++..|+|||.+... ...++.++||||+||++|||++|+.||..........
T Consensus 152 ~~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~ 220 (328)
T cd08226 152 VRNGQKAK-VVYDFPQFSTSVLPWLSPELLRQD----------LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLL 220 (328)
T ss_pred hccCcccc-ccccccccccCccCccChhhhcCC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHH
Confidence 22111000 000111122356679999766421 1347889999999999999999999997542211100
Q ss_pred HHHHHhh--------cchhhhhh----------cCccc-c----ccc-ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 921 HEFCKMA--------LPEKVMET----------VDPSL-L----LAW-SDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 921 ~~~~~~~--------~~~~~~~~----------~d~~~-~----~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
....... .+...... +.... . ... ......+....+...+.+++.+||..||++||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 300 (328)
T cd08226 221 QKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRP 300 (328)
T ss_pred HHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCC
Confidence 0000000 00000000 00000 0 000 00011122345667899999999999999999
Q ss_pred CHHHHHH--HHHHHHHH
Q 001908 977 EMRDVLA--KLCAARQT 991 (997)
Q Consensus 977 s~~evl~--~L~~~~~~ 991 (997)
|+.|+++ .+..+.+.
T Consensus 301 ta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 301 SASSLLSHAFFKQVKEQ 317 (328)
T ss_pred CHHHHhhCHHHHHHHHh
Confidence 9999964 34444443
No 351
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=3.5e-31 Score=284.65 Aligned_cols=250 Identities=26% Similarity=0.389 Sum_probs=198.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
+|+..+.||+|++|.||++....+++.+|+|++........+.+.+|++++++++|++++++++++. .....+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYL-----KKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEe-----cCCeEEEE
Confidence 4778899999999999999998889999999997655556678899999999999999999999854 34689999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+||+++++|.+++.... ..+++..+..++.|++.|++|||.. +++|+||+|+||+++.++.+||+|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~ 147 (253)
T cd05122 76 MEFCSGGSLKDLLKSTN-----QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQ 147 (253)
T ss_pred EecCCCCcHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccc
Confidence 99999999999998753 2478999999999999999999998 999999999999999999999999999876
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
..... ......++..|+|||.+. +..++.++||||||+++|+|++|+.||.....
T Consensus 148 ~~~~~---------~~~~~~~~~~~~~PE~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---- 202 (253)
T cd05122 148 LSDTK---------ARNTMVGTPYWMAPEVIN------------GKPYDYKADIWSLGITAIELAEGKPPYSELPP---- 202 (253)
T ss_pred ccccc---------cccceecCCcccCHHHHc------------CCCCCccccHHHHHHHHHHHHhCCCCCCCCch----
Confidence 52211 023456888999996554 45578899999999999999999999863311
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+......... .+.. .....++..+.+++.+||..||++|||+.|+++
T Consensus 203 -~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 203 -MKALFKIATNG-----PPGL----------RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -HHHHHHHHhcC-----CCCc----------CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11100000000 0000 001112456889999999999999999999875
No 352
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=7.9e-32 Score=303.59 Aligned_cols=276 Identities=20% Similarity=0.282 Sum_probs=195.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC---------
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID--------- 749 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~--------- 749 (997)
.+|++.+.||+|+||.||+|....+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 57899999999999999999999999999999997655556678889999999999999999998754321
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-CCCc
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMV 828 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~~~~ 828 (997)
+......++||||++ ++|.+++... .+++..++.++.||+.|++|||+. +|+||||||+||+++ +++.
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~ 153 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG-------PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLV 153 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCce
Confidence 111246799999996 5999888653 278889999999999999999999 999999999999997 4568
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+|++|||.++...... ..........++..|+|||.+.. +..++.++|||||||++|||++|+.
T Consensus 154 ~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwSlGvil~el~~g~~ 217 (342)
T cd07854 154 LKIGDFGLARIVDPHY-----SHKGYLSEGLVTKWYRSPRLLLS-----------PNNYTKAIDMWAAGCIFAEMLTGKP 217 (342)
T ss_pred EEECCcccceecCCcc-----ccccccccccccccccCHHHHhC-----------ccccCchhhHHHHHHHHHHHHhCCC
Confidence 8999999987542111 01111122357889999976532 3457889999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcch-------hhhhhcCcccc-cccc-cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPE-------KVMETVDPSLL-LAWS-DGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
||....... ........ .+. ........... .... .............++.+++.+|+..||++|||+.
T Consensus 218 pf~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ 295 (342)
T cd07854 218 LFAGAHELE-QMQLILES-VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAE 295 (342)
T ss_pred CCCCCCHHH-HHHHHHHh-cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHH
Confidence 997432110 01111000 000 00000000000 0000 0000001112345678999999999999999999
Q ss_pred HHHH
Q 001908 980 DVLA 983 (997)
Q Consensus 980 evl~ 983 (997)
|+++
T Consensus 296 ell~ 299 (342)
T cd07854 296 EALM 299 (342)
T ss_pred HHhC
Confidence 9974
No 353
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=1.7e-31 Score=297.31 Aligned_cols=284 Identities=22% Similarity=0.308 Sum_probs=198.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc---CC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---KG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 752 (997)
.++|++.++||+|+||.||+|+++.+++.||+|++.... ......+.+|++++++++|+||+++++++..... ..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 468999999999999999999999899999999986332 2223466789999999999999999987644321 22
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++|+||++ +++.+.+.... ..+++..+..++.|+++||+|||++ +|+||||||+||++++++.+|++
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~~~-----~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~ 157 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLENPS-----VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIA 157 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhccc-----cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEC
Confidence 346899999995 47887776533 2488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccc---cccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 833 DFGLARFLFARPFDTSME---TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
|||++............. .........+++.|+|||.+.. ...++.++|||||||++|||++|++|
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~il~el~~g~~~ 226 (311)
T cd07866 158 DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG-----------ERRYTTAVDIWGIGCVFAEMFTRRPI 226 (311)
T ss_pred cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC-----------CCccCchhHhHHHHHHHHHHHhCCCC
Confidence 999998653322111100 1112233467889999976542 24578899999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhh--cchhhh-------hhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 910 TNCMFQGGLTLHEFCKMA--LPEKVM-------ETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
|...... .......... .....+ ...+......... ..........+.+.+++.+|+..||++|||+.|
T Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~e 304 (311)
T cd07866 227 LQGKSDI-DQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPR-TLEERFGKLGPEGLDLLSKLLSLDPYKRLTASD 304 (311)
T ss_pred CCCCCHH-HHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCc-cHHHHcccCChhHHHHHHHHcccCcccCcCHHH
Confidence 8643211 1111111100 000000 0000000000000 000111122356889999999999999999999
Q ss_pred HHH
Q 001908 981 VLA 983 (997)
Q Consensus 981 vl~ 983 (997)
++.
T Consensus 305 ll~ 307 (311)
T cd07866 305 ALE 307 (311)
T ss_pred Hhc
Confidence 874
No 354
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=1.8e-31 Score=289.42 Aligned_cols=252 Identities=25% Similarity=0.378 Sum_probs=191.4
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccch---hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQK---GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||.||+|++..+++.||+|++..... ...+.+.+|++++++++|+||+++++.+ ......++++||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF-----QGKKNLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe-----ecCcEEEEEEecC
Confidence 6899999999999998899999999864332 4556789999999999999999998874 4566899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++.... .+++..++.++.|++.||+|||+. +++|+||+|+||+++.++.+|++|||++......
T Consensus 76 ~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~ 146 (265)
T cd05579 76 PGGDLASLLENVG------SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVR 146 (265)
T ss_pred CCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccC
Confidence 9999999998754 478899999999999999999999 9999999999999999999999999998765322
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
................++..|+|||... +..++.++||||||+++||+++|..||.... ..+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~------------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~-----~~~~ 209 (265)
T cd05579 147 RQINLNDDEKEDKRIVGTPDYIAPEVIL------------GQGHSKTVDWWSLGCILYEFLVGIPPFHGET-----PEEI 209 (265)
T ss_pred cccccccccccccCcccCccccCHHHhc------------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCC-----HHHH
Confidence 1110000111223356788999996553 4557889999999999999999999987432 1111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
........ . . + +.....+..+.+++.+||+.+|++|||++.+.+.+
T Consensus 210 ~~~~~~~~----~--~----~------~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 210 FQNILNGK----I--E----W------PEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHhcCC----c--C----C------CccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 11110000 0 0 0 00001256778999999999999999995555444
No 355
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3e-31 Score=289.92 Aligned_cols=243 Identities=24% Similarity=0.315 Sum_probs=182.3
Q ss_pred cccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHH---HHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECE---VLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~---~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.||+|+||.||+|....+++.||+|++.... ......+..|.. .++..+||+|+++.+++ ...+..++|
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~v 75 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF-----HTPDKLSFI 75 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee-----ecCCEEEEE
Confidence 4899999999999998889999999886421 111122333433 34445799999999884 455689999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
|||+++|+|.+++.... .+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||.+..
T Consensus 76 ~e~~~g~~L~~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~ 146 (278)
T cd05606 76 LDLMNGGDLHYHLSQHG------VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACD 146 (278)
T ss_pred EecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccc
Confidence 99999999999987543 488999999999999999999999 999999999999999999999999999875
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
.... ......|+..|+|||.+.. +..++.++||||+||++|||++|+.||...... .
T Consensus 147 ~~~~----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~--~ 203 (278)
T cd05606 147 FSKK----------KPHASVGTHGYMAPEVLQK-----------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--D 203 (278)
T ss_pred cCcc----------CCcCcCCCcCCcCcHHhcC-----------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc--c
Confidence 4211 1123468999999976531 235788999999999999999999999743211 1
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..+..... ...++.+ +.....++.+++.+|+..+|++|| ++.++++
T Consensus 204 ~~~~~~~~------~~~~~~~------------~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 204 KHEIDRMT------LTMAVEL------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred hHHHHHHh------hccCCCC------------CCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 11110000 0011111 111245678999999999999999 9999875
No 356
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=1.3e-31 Score=289.12 Aligned_cols=250 Identities=24% Similarity=0.301 Sum_probs=198.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.++||+|+||.||+++...+++.+|+|++... .......+.+|++++++++|+||+++.+++ ......+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~ 75 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAF-----LDGNKLC 75 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhh-----ccCCEEE
Confidence 478889999999999999999989999999998643 334456778999999999999999999884 4457899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+|++|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~ 150 (256)
T cd08530 76 IVMEYAPFGDLSKAISKRKKK--RKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGIS 150 (256)
T ss_pred EEehhcCCCCHHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccch
Confidence 999999999999999774311 12478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ......+++.|+|||.+ .+..++.++|+||+|+++|||++|+.||....
T Consensus 151 ~~~~~~----------~~~~~~~~~~~~~Pe~~------------~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~--- 205 (256)
T cd08530 151 KVLKKN----------MAKTQIGTPHYMAPEVW------------KGRPYSYKSDIWSLGCLLYEMATFAPPFEARS--- 205 (256)
T ss_pred hhhccC----------CcccccCCccccCHHHH------------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence 876322 11224578899999654 35667889999999999999999999987431
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+......... ....+.....++.+++.+|+..+|++||++.|+++
T Consensus 206 --~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 206 --MQDLRYKVQRGK-----------------YPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred --HHHHHHHHhcCC-----------------CCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111111110000 00111234567889999999999999999999875
No 357
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.7e-31 Score=291.87 Aligned_cols=245 Identities=24% Similarity=0.321 Sum_probs=187.6
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||+||+|..+.+++.||+|++.... ......+.+|++++++++||||+++++++ ...+..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF-----ETKDDLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE-----ecCCeEEEEEecC
Confidence 699999999999999899999999986322 22345667899999999999999999884 4456899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++..... ..+++..++.++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+.....
T Consensus 76 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~- 147 (277)
T cd05577 76 NGGDLKYHIYNVGE----PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKG- 147 (277)
T ss_pred CCCcHHHHHHHcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhcc-
Confidence 99999999986542 2478899999999999999999999 999999999999999999999999999876421
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
........++..|+|||.+. +..++.++||||+||++|+|++|+.||...... ....+.
T Consensus 148 --------~~~~~~~~~~~~y~~PE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~ 206 (277)
T cd05577 148 --------GKKIKGRAGTPGYMAPEVLQ------------GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEEL 206 (277)
T ss_pred --------CCccccccCCCCcCCHHHhc------------CCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHH
Confidence 11112345788999996543 456888999999999999999999998743221 111111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
...... . .. ..+....+.+.+++.+||..+|++|| ++.+++.
T Consensus 207 ~~~~~~-~-----~~------------~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 207 KRRTLE-M-----AV------------EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred Hhcccc-c-----cc------------cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 110000 0 00 01112245678999999999999999 5555653
No 358
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=6.5e-31 Score=283.85 Aligned_cols=254 Identities=25% Similarity=0.355 Sum_probs=200.3
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|+..+.||+|++|.||+|....+++.|++|++.... ....+.+.+|++++++++|+||+++++++... .....+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE---EKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---CCCeEE
Confidence 4778899999999999999999899999999987543 24567889999999999999999999986432 126899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||+++++|.+++.... .+++..++.++.|++.|++|||+. +++|+||+|+||+++.++.+||+|||.+
T Consensus 78 lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~ 148 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFG------KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCA 148 (260)
T ss_pred EEEEecCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccE
Confidence 9999999999999998754 488999999999999999999998 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
......... .......++..|+|||.+. +..++.++||||||+++|+|++|..||....
T Consensus 149 ~~~~~~~~~------~~~~~~~~~~~y~~pE~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--- 207 (260)
T cd06606 149 KRLGDIETG------EGTGSVRGTPYWMAPEVIR------------GEEYGRAADIWSLGCTVIEMATGKPPWSELG--- 207 (260)
T ss_pred Eeccccccc------ccccCCCCCccccCHhhhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCC---
Confidence 866322110 1123456888999996554 4558889999999999999999999987543
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... ..... ....+...+..+.+++.+|+..+|++||++.|+++
T Consensus 208 -~~~~~~~~~--------~~~~~--------~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 208 -NPMAALYKI--------GSSGE--------PPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -chHHHHHhc--------cccCC--------CcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 111111110 00000 00111223567889999999999999999999975
No 359
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=4.4e-31 Score=286.16 Aligned_cols=243 Identities=24% Similarity=0.300 Sum_probs=190.0
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||.||+|+...+++.||+|++.... ....+.+.+|++++++++|+||+++++++ .++...++|+||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF-----KDKKYIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE-----EcCCccEEEEecC
Confidence 699999999999998889999999986322 23457789999999999999999999985 3456899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++.+.. .++...+..++.|++.|++|||+. +++|+||||+||+++.++.+|++|||.++.....
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~ 146 (262)
T cd05572 76 LGGELWTILRDRG------LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSG 146 (262)
T ss_pred CCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCcc
Confidence 9999999998754 377889999999999999999998 9999999999999999999999999999765221
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
. ......++..|+|||.+. +..++.++||||+|+++|+|++|..||.....+ ..+.
T Consensus 147 ~---------~~~~~~~~~~~~~PE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~---~~~~ 202 (262)
T cd05572 147 Q---------KTWTFCGTPEYVAPEIIL------------NKGYDFSVDYWSLGILLYELLTGRPPFGEDDED---PMEI 202 (262)
T ss_pred c---------ccccccCCcCccChhHhc------------CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC---HHHH
Confidence 1 122346788999996543 456788999999999999999999998744221 1111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
.... .+... ....+...+..+.+++.+||..+|++||+ ++|+++
T Consensus 203 ~~~~--------~~~~~--------~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 203 YNDI--------LKGNG--------KLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHH--------hccCC--------CCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 1110 00000 00111122567889999999999999999 666654
No 360
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=4.3e-31 Score=293.26 Aligned_cols=252 Identities=25% Similarity=0.325 Sum_probs=193.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+.|+..+.||+|+||.||+|+...+++.||+|.+.. ......+.+.+|+++++.++|+|++++.+++.. ...
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~ 89 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 89 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc-----CCe
Confidence 447778899999999999999998999999998863 223344678899999999999999999998643 457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+. |++.+++..... .+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||
T Consensus 90 ~~lv~e~~~-~~l~~~~~~~~~-----~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 90 AWLVMEYCL-GSASDLLEVHKK-----PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred eEEEEEccC-CCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 899999996 688887764431 378889999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++..... .....+++.|+|||.+... ....++.++|||||||++|||++|+.||.....
T Consensus 161 ~~~~~~~------------~~~~~~~~~y~aPE~~~~~---------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 219 (308)
T cd06634 161 SASIMAP------------ANXFVGTPYWMAPEVILAM---------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA 219 (308)
T ss_pred cceeecC------------cccccCCccccCHHHHhhc---------ccCCCCcccchHHHHHHHHHHHcCCCCCccccH
Confidence 9875421 1224578899999876421 134578899999999999999999999863211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.+...... ....+.. ....+...+.+++.+||..+|++||++.++++.-.
T Consensus 220 -----~~~~~~~~-----~~~~~~~-----------~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 220 -----MSALYHIA-----QNESPAL-----------QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred -----HHHHHHHh-----hcCCCCc-----------CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 01000000 0000000 01123456789999999999999999999876533
No 361
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=7.3e-32 Score=250.30 Aligned_cols=266 Identities=22% Similarity=0.318 Sum_probs=193.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|...++||+|.||+||+|+.+++++.||+|+++. .+++......+|+-+++.++|+|||+++++ ...+....
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dv-----lhsdkklt 77 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDV-----LHSDKKLT 77 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhh-----hccCceeE
Confidence 46677899999999999999999999999999873 344556788999999999999999999998 55677899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+|||. .+|..+...-.+ .++...++.++.|+++|+.|+|+. .+.|||+||.|.+|+.+|+.|++|||+|
T Consensus 78 lvfe~cd-qdlkkyfdslng-----~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfgla 148 (292)
T KOG0662|consen 78 LVFEFCD-QDLKKYFDSLNG-----DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLA 148 (292)
T ss_pred EeHHHhh-HHHHHHHHhcCC-----cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchh
Confidence 9999994 489998887653 378889999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+....+ .......+-|..|++|.++-. ..-|+++.|+||.||++.|+.. |++-|...
T Consensus 149 rafgip--------vrcysaevvtlwyrppdvlfg-----------akly~tsidmwsagcifaelanagrplfpg~--- 206 (292)
T KOG0662|consen 149 RAFGIP--------VRCYSAEVVTLWYRPPDVLFG-----------AKLYSTSIDMWSAGCIFAELANAGRPLFPGN--- 206 (292)
T ss_pred hhcCCc--------eEeeeceeeeeeccCcceeee-----------eehhccchHhhhcchHHHHHhhcCCCCCCCC---
Confidence 865221 112234567899999954421 2447889999999999999998 55545422
Q ss_pred CccHHHHHHhh-------cchhhhhhc---Ccccccccccchhhhh-HHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA-------LPEKVMETV---DPSLLLAWSDGRRRAK-VEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~-------~~~~~~~~~---d~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
++.+..... ..+.+..+. |-.....+.......+ ....-..=.+++++.+.-+|..|+++.++++
T Consensus 207 --dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 207 --DVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred --cHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 222221111 111222211 1111111111000000 0111112346777888889999999998875
No 362
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=2e-31 Score=287.69 Aligned_cols=252 Identities=24% Similarity=0.377 Sum_probs=199.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|+||.||++.+..+++.||+|++.... ....+.+.+|++++++++|+|++++.+.+. ..+..+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~-----~~~~~~ 75 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFE-----EKGKLC 75 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEe-----cCCEEE
Confidence 4788899999999999999998889999999997443 345677899999999999999999999843 346899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|+||+++++|.+++..... ....+++..+..++.+++.|++|||+. +++|+||+|+||+++.++.++|+|||.+
T Consensus 76 lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~ 150 (258)
T cd08215 76 IVMEYADGGDLSQKIKKQKK--EGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGIS 150 (258)
T ss_pred EEEEecCCCcHHHHHHHhhc--cCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccce
Confidence 99999999999999987531 113588999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... .......|++.|+|||... +..++.++||||+|+++++|++|+.||....
T Consensus 151 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~------------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~--- 207 (258)
T cd08215 151 KVLSSTV--------DLAKTVVGTPYYLSPELCQ------------NKPYNYKSDIWSLGCVLYELCTLKHPFEGEN--- 207 (258)
T ss_pred eecccCc--------ceecceeeeecccChhHhc------------cCCCCccccHHHHHHHHHHHHcCCCCCCCCc---
Confidence 7652211 1222346888999996543 4567889999999999999999999986431
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+......... .+. .+..++.++.+++.+||..+|++|||+.|+++
T Consensus 208 --~~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 208 --LLELALKILKGQ-----YPP------------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred --HHHHHHHHhcCC-----CCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 222211111100 000 01123456789999999999999999999875
No 363
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=8.4e-31 Score=291.51 Aligned_cols=248 Identities=26% Similarity=0.359 Sum_probs=190.7
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
|...++||+|+||+||+|+...+++.||+|++... .....+.+.+|+++++.++|+|++++++++.. .+..+
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 97 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-----EHTAW 97 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEEE
Confidence 56667899999999999999889999999998632 22344678889999999999999999999643 45789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+. |++.+++..... .+++.+++.++.|++.|+.|||+. +++|+||||+||+++.++.+||+|||.+
T Consensus 98 lv~e~~~-~~l~~~l~~~~~-----~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~ 168 (313)
T cd06633 98 LVMEYCL-GSASDLLEVHKK-----PLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSA 168 (313)
T ss_pred EEEecCC-CCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCC
Confidence 9999995 688888765431 378899999999999999999999 9999999999999999999999999988
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
.... ......|+..|+|||.+... ..+.++.++|||||||++|||++|..||.....
T Consensus 169 ~~~~------------~~~~~~~~~~y~aPE~~~~~---------~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-- 225 (313)
T cd06633 169 SKSS------------PANSFVGTPYWMAPEVILAM---------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-- 225 (313)
T ss_pred cccC------------CCCCccccccccChhhcccc---------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh--
Confidence 6421 11234688899999876321 235578899999999999999999999864311
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
........ ... .+... .......+.+++.+||+.+|++||++.++++.
T Consensus 226 --~~~~~~~~-~~~-----~~~~~-----------~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 226 --MSALYHIA-QND-----SPTLQ-----------SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred --HHHHHHHH-hcC-----CCCCC-----------ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 11110000 000 00000 01123457889999999999999999999853
No 364
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=8.9e-31 Score=291.94 Aligned_cols=251 Identities=24% Similarity=0.345 Sum_probs=193.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.|+..+.||+|+||.||+|++..++..||+|++... .......+.+|++++++++|+|++++++++.. .+..
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~ 100 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-----EHTA 100 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-----CCeE
Confidence 367788999999999999999889999999998632 23344678899999999999999999998643 4578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ |++.+.+.... ..+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+||+|||+
T Consensus 101 ~lv~e~~~-g~l~~~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~ 171 (317)
T cd06635 101 WLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGS 171 (317)
T ss_pred EEEEeCCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCC
Confidence 99999996 58888776533 1478999999999999999999999 999999999999999999999999998
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+..... .....|++.|+|||.+... ..+.++.++|||||||++|||++|+.||....
T Consensus 172 ~~~~~~------------~~~~~~~~~y~aPE~~~~~---------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~-- 228 (317)
T cd06635 172 ASIASP------------ANSFVGTPYWMAPEVILAM---------DEGQYDGKVDVWSLGITCIELAERKPPLFNMN-- 228 (317)
T ss_pred ccccCC------------cccccCCccccChhhhhcC---------CCCCCCccccHHHHHHHHHHHHhCCCCCCCcc--
Confidence 864311 1224578899999876321 23567889999999999999999999986421
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.......... . ..+. .....+...+.+++.+||+.+|.+||++.++++...
T Consensus 229 --~~~~~~~~~~-~-----~~~~-----------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~ 279 (317)
T cd06635 229 --AMSALYHIAQ-N-----ESPT-----------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMF 279 (317)
T ss_pred --HHHHHHHHHh-c-----cCCC-----------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhChh
Confidence 1111100000 0 0000 001123456789999999999999999999987543
No 365
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=3.4e-31 Score=290.56 Aligned_cols=268 Identities=23% Similarity=0.309 Sum_probs=193.4
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccch-hhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.+.||+|++|+||+|+...+++.||+|++..... .......+|++.+++++ |+|++++++++ ...+..++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~-----~~~~~~~l 75 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVF-----RENDELYF 75 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHh-----hcCCcEEE
Confidence 6678899999999999999988899999999864322 22334567899999998 99999999985 34668999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||+ +|+|.+++..... ..+++..+..++.|++.|+.|||++ +++|+||+|+||++++++.++|+|||.+.
T Consensus 76 v~e~~-~~~l~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~ 147 (283)
T cd07830 76 VFEYM-EGNLYQLMKDRKG----KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAR 147 (283)
T ss_pred EEecC-CCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccce
Confidence 99999 8899999887541 2478999999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... .......++..|+|||.+.. ...++.++||||||++++||++|++||.......
T Consensus 148 ~~~~~---------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~- 206 (283)
T cd07830 148 EIRSR---------PPYTDYVSTRWYRAPEILLR-----------STSYSSPVDIWALGCIMAELYTLRPLFPGSSEID- 206 (283)
T ss_pred eccCC---------CCcCCCCCcccccCceeeec-----------CcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-
Confidence 65221 11123457889999976532 3457889999999999999999999986432111
Q ss_pred cHHHHHHhh---cchhhh------hhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA---LPEKVM------ETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~---~~~~~~------~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+....... ....+. ...+...... ...............+.+++.+||..+|++|||++|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 207 QLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF-APTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred HHHHHHHhcCCCChhhhhhHhhhhcccccccccc-ccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 011100000 000000 0000000000 000000001112456889999999999999999999875
No 366
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.5e-31 Score=312.85 Aligned_cols=278 Identities=19% Similarity=0.173 Sum_probs=184.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCc-EEEEEE--------------ec---ccchhhHHHHHHHHHHHhhcCCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGT-FVAVKI--------------LN---LMQKGALKSFVAECEVLRNTRHRNL 738 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-~vAvK~--------------~~---~~~~~~~~~~~~E~~~l~~l~h~ni 738 (997)
..++|++.++||+|+||+||+|..+.... .++.|. +. .........+.+|++++++++|+||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987653222 122221 10 1112234567899999999999999
Q ss_pred ceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 739 v~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
+++++++. ..+..|+|+|++ .+++.+++........ .......+..++.|++.||+|||++ +|+||||||
T Consensus 226 v~l~~~~~-----~~~~~~lv~e~~-~~~l~~~l~~~~~~~~-~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP 295 (501)
T PHA03210 226 LKIEEILR-----SEANTYMITQKY-DFDLYSFMYDEAFDWK-DRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKL 295 (501)
T ss_pred CcEeEEEE-----ECCeeEEEEecc-ccCHHHHHhhcccccc-ccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCH
Confidence 99999954 455789999999 5688888765432111 1233566788999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+|||++.++.+||+|||+|+..... .........||..|+|||++ .+..++.++|||||||
T Consensus 296 ~NILl~~~~~vkL~DFGla~~~~~~-------~~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwSlGv 356 (501)
T PHA03210 296 ENIFLNCDGKIVLGDFGTAMPFEKE-------REAFDYGWVGTVATNSPEIL------------AGDGYCEITDIWSCGL 356 (501)
T ss_pred HHEEECCCCCEEEEeCCCceecCcc-------cccccccccCCcCCCCchhh------------cCCCCCcHHHHHHHHH
Confidence 9999999999999999999765221 11122335799999999655 3567899999999999
Q ss_pred HHHHHHhCCCC-CCcCcCC-CccHHHHHHhh------cch---hhhhhcCcccccc-cccchhhhhHHHHHHHHHHHHhh
Q 001908 899 MLLEMFTRRRP-TNCMFQG-GLTLHEFCKMA------LPE---KVMETVDPSLLLA-WSDGRRRAKVEECLVTVIRIGVA 966 (997)
Q Consensus 899 vl~elltg~~P-~~~~~~~-~~~~~~~~~~~------~~~---~~~~~~d~~~~~~-~~~~~~~~~~~~~~~~l~~li~~ 966 (997)
++|||++|..| +...... ...+.+..... .++ +..+.++...... ...-.........+.++.+++.+
T Consensus 357 il~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~k 436 (501)
T PHA03210 357 ILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVK 436 (501)
T ss_pred HHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHH
Confidence 99999998754 4322111 01111111110 000 1111111100000 00000000011123457788999
Q ss_pred cCCCCCCCCCCHHHHHH
Q 001908 967 CSMESPIERMEMRDVLA 983 (997)
Q Consensus 967 cl~~dP~~Rps~~evl~ 983 (997)
|+..||++|||+.|+++
T Consensus 437 mL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 437 MLTFDWHLRPGAAELLA 453 (501)
T ss_pred HhccCcccCcCHHHHhh
Confidence 99999999999999986
No 367
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.8e-31 Score=286.05 Aligned_cols=248 Identities=28% Similarity=0.455 Sum_probs=197.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccch--hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|++|.||+|+...+++.||+|.+..... ...+.+.+|++++++++|+|++++++++. +....+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-----~~~~~~ 75 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIE-----TSDSLY 75 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEE-----eCCEEE
Confidence 47788999999999999999988899999999975443 45678899999999999999999999854 346899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
++|||+++++|.+++.... .+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 76 ~v~e~~~~~~L~~~~~~~~------~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~ 146 (254)
T cd06627 76 IILEYAENGSLRQIIKKFG------PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVA 146 (254)
T ss_pred EEEecCCCCcHHHHHHhcc------CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccc
Confidence 9999999999999998653 478999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
....... .......++..|+|||... +..++.++||||+|+++|+|++|+.||....
T Consensus 147 ~~~~~~~--------~~~~~~~~~~~y~~pe~~~------------~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~--- 203 (254)
T cd06627 147 TKLNDVS--------KDDASVVGTPYWMAPEVIE------------MSGASTASDIWSLGCTVIELLTGNPPYYDLN--- 203 (254)
T ss_pred eecCCCc--------ccccccccchhhcCHhhhc------------CCCCCcchhHHHHHHHHHHHHhCCCCCCCcc---
Confidence 8653211 1123346788999997553 3447889999999999999999999986321
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... . . ..+. .+...+..+.+++.+||..+|++||++.|++.
T Consensus 204 -~~~~~~~~~-~-~----~~~~------------~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 204 -PMAALFRIV-Q-D----DHPP------------LPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -HHHHHHHHh-c-c----CCCC------------CCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 111111110 0 0 0000 01122456779999999999999999999874
No 368
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=282.78 Aligned_cols=265 Identities=23% Similarity=0.362 Sum_probs=199.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CC-----CcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HR-----NLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~~ 751 (997)
+++|.+...+|+|+||.|-++.+++++..||||+++..... .+..+-|+++++++. +. -+|++.+| |+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~w-----Fd 161 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDW-----FD 161 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehh-----hh
Confidence 78899999999999999999999999999999999865443 356678999999993 32 25566555 66
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC------
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH------ 825 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~------ 825 (997)
..++.|+|+|.+ |-|+.+++..+. ..+++..+++.|+.|++++++|||+. +++|-|+||+||++.+
T Consensus 162 yrghiCivfell-G~S~~dFlk~N~----y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~ 233 (415)
T KOG0671|consen 162 YRGHICIVFELL-GLSTFDFLKENN----YIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKT 233 (415)
T ss_pred ccCceEEEEecc-ChhHHHHhccCC----ccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEE
Confidence 678999999999 779999999865 34689999999999999999999999 9999999999999942
Q ss_pred --------------CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 826 --------------DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 826 --------------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+..+|++|||.|+.. .+.....+.|..|+|| |++.+-+++..+
T Consensus 234 ~~~k~~~~~~r~~ks~~I~vIDFGsAtf~-----------~e~hs~iVsTRHYRAP------------EViLgLGwS~pC 290 (415)
T KOG0671|consen 234 YNPKKKVCFIRPLKSTAIKVIDFGSATFD-----------HEHHSTIVSTRHYRAP------------EVILGLGWSQPC 290 (415)
T ss_pred eccCCccceeccCCCcceEEEecCCccee-----------ccCcceeeeccccCCc------------hheeccCcCCcc
Confidence 346999999999753 1222556789999999 556678999999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHH--h---hcchhhhhhcCccc-----cccccc-------------ch
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCK--M---ALPEKVMETVDPSL-----LLAWSD-------------GR 948 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~--~---~~~~~~~~~~d~~~-----~~~~~~-------------~~ 948 (997)
||||+||||+|+.||..-|..-. +.+..+. . ..|..+..-.+... ...|.+ ..
T Consensus 291 DvWSiGCIL~ElytG~~LFqtHe----n~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ck 366 (415)
T KOG0671|consen 291 DVWSIGCILVELYTGETLFQTHE----NLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCK 366 (415)
T ss_pred CceeeeeEEEEeeccceecccCC----cHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCc
Confidence 99999999999999999887332 2222211 1 22322222220000 001100 00
Q ss_pred h----hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 949 R----RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 949 ~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. +........++++|+..|+.+||++|+|+.|++.
T Consensus 367 pl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~ 405 (415)
T KOG0671|consen 367 PLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS 405 (415)
T ss_pred cHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence 0 1112244567999999999999999999999875
No 369
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-33 Score=275.30 Aligned_cols=259 Identities=22% Similarity=0.309 Sum_probs=190.6
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhh-cCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRN-TRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
+....||.|+||+|+|..++..|+..|||+++... ..+.+++..|.+...+ =+.||||++||.+. .++..++.
T Consensus 67 qdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F-----~EGdcWiC 141 (361)
T KOG1006|consen 67 QDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALF-----SEGDCWIC 141 (361)
T ss_pred HHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhh-----cCCceeee
Confidence 33567999999999999999999999999998443 3556788888886544 47999999999863 34468999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
||.| ..+++.+.+.--. .....+++.-.-+|+...+.||+||-+.. .|+|||+||+|||++..|.+|++|||.+-.
T Consensus 142 MELM-d~SlDklYk~vy~-vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 142 MELM-DISLDKLYKRVYS-VQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred HHHH-hhhHHHHHHHHHH-HHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeecccchHh
Confidence 9999 4476655432110 00123666677788888999999999876 899999999999999999999999999876
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT 919 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~ 919 (997)
+.. ........|-..|||||.+.+. +..|+.++||||+|++++|+.||..||... ...
T Consensus 218 Lv~---------SiAkT~daGCrpYmAPERi~p~----------~~gyDiRSDvWSLGITL~EvAtG~fPyr~w---~sv 275 (361)
T KOG1006|consen 218 LVD---------SIAKTVDAGCRPYMAPERIDPS----------DKGYDIRSDVWSLGITLYEVATGNFPYRKW---DSV 275 (361)
T ss_pred HHH---------HHHhhhccCCccccChhccCCc----------cCCcchhhhhhhhcceEeeeecCCCCcchH---HHH
Confidence 622 2233445788999999998753 346999999999999999999999998732 111
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
+++. .+. ..-||....... ...+....+.+++..|+.+|-..||...++++.
T Consensus 276 feql-~~V------v~gdpp~l~~~~------~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 276 FEQL-CQV------VIGDPPILLFDK------ECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHHH-HHH------HcCCCCeecCcc------cccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 1221 111 111222221111 011234578899999999999999999998653
No 370
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=6.8e-31 Score=284.30 Aligned_cols=244 Identities=23% Similarity=0.360 Sum_probs=184.1
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHH-hhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVL-RNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.||+|+||.||+|....+++.||+|+++... ......+..|..++ ...+|+|++++++++. ..+..++|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~~~lv~ 76 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQ-----SKDYLYLVM 76 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEE-----cCCeEEEEE
Confidence 56899999999999998899999999986432 22223445555544 4458999999999853 456899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++++|.+++.... .+++..+.+++.|++.||.|||+. +++||||+|+||+++.++.+||+|||+++..
T Consensus 77 e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 147 (260)
T cd05611 77 EYLNGGDCASLIKTLG------GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNG 147 (260)
T ss_pred eccCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceec
Confidence 9999999999997654 377888999999999999999999 9999999999999999999999999998753
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
.. .....++..|+|||.+. +..++.++||||+|+++|||++|..||.... .
T Consensus 148 ~~------------~~~~~~~~~y~~pe~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~ 198 (260)
T cd05611 148 LE------------NKKFVGTPDYLAPETIL------------GVGDDKMSDWWSLGCVIFEFLFGYPPFHAET-----P 198 (260)
T ss_pred cc------------cccCCCCcCccChhhhc------------CCCCcchhhhHHHHHHHHHHHHCCCCCCCCC-----H
Confidence 11 12345788999996543 4557899999999999999999999986321 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
.+........ ..+ +. ......++..+.+++.+||..+|++||++.++.+.+
T Consensus 199 ~~~~~~~~~~----~~~------~~----~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 199 DAVFDNILSR----RIN------WP----EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHHhc----ccC------CC----CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 1111110000 000 00 001113456788999999999999999876554443
No 371
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=5.1e-31 Score=296.50 Aligned_cols=278 Identities=19% Similarity=0.315 Sum_probs=193.8
Q ss_pred hcCc-cCCcccccCcceEEEEEECCCCcEEEEEEecccchhh--------------HHHHHHHHHHHhhcCCCCcceEEe
Q 001908 679 NEFS-SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA--------------LKSFVAECEVLRNTRHRNLIKIIT 743 (997)
Q Consensus 679 ~~~~-~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~--------------~~~~~~E~~~l~~l~h~niv~l~~ 743 (997)
++|. +.+.||+|+||+||+|.+..+++.||||+++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 4577999999999999998899999999986332111 124678999999999999999999
Q ss_pred eeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
++. ..+..++||||++ |+|.+++.... .++......++.|++.|++|||+. +|+||||||+||++
T Consensus 88 ~~~-----~~~~~~lv~e~~~-~~l~~~l~~~~------~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill 152 (335)
T PTZ00024 88 VYV-----EGDFINLVMDIMA-SDLKKVVDRKI------RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFI 152 (335)
T ss_pred EEe-----cCCcEEEEEeccc-cCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEE
Confidence 854 4568999999996 69999987643 478889999999999999999999 99999999999999
Q ss_pred CCCCcEEEcccccchhcccCCCCCcc------ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 824 DHDMVAHVSDFGLARFLFARPFDTSM------ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 824 ~~~~~~kl~DFg~a~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
+.++.+|++|||.+.....+...... ..........++..|+|||.+.. ...++.++||||+|
T Consensus 153 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG 221 (335)
T PTZ00024 153 NSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG-----------AEKYHFAVDMWSVG 221 (335)
T ss_pred CCCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc-----------CCCCCcHHHHHHHH
Confidence 99999999999999766422111100 01111122346888999976531 23468899999999
Q ss_pred HHHHHHHhCCCCCCcCcCCCccHHHHHHhhc-c--hhhhhhcC-cccc--cccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 898 VMLLEMFTRRRPTNCMFQGGLTLHEFCKMAL-P--EKVMETVD-PSLL--LAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 898 vvl~elltg~~P~~~~~~~~~~~~~~~~~~~-~--~~~~~~~d-~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|++|||++|++||......+ .+........ + ..+....+ +... ..............+..++.+++.+|+..+
T Consensus 222 ~~l~el~tg~~p~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~ 300 (335)
T PTZ00024 222 CIFAELLTGKPLFPGENEID-QLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLN 300 (335)
T ss_pred HHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCC
Confidence 99999999999987432111 1111111000 0 00000000 0000 000000001111223567889999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|++||++.|++.
T Consensus 301 P~~R~s~~~~l~ 312 (335)
T PTZ00024 301 PLERISAKEALK 312 (335)
T ss_pred chhccCHHHHhc
Confidence 999999999985
No 372
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=3e-31 Score=297.82 Aligned_cols=283 Identities=20% Similarity=0.258 Sum_probs=203.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+|++.+.||+|+||.||+|+...+++.||+|++.... ....+.+.+|++++++++|+||+++.+++...........+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788999999999999999998889999999987433 34457889999999999999999999986543222334789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ ++|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.++|+|||.+
T Consensus 81 lv~e~~~-~~l~~~l~~~~------~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ------PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred EEecchh-hhHHHHHhCCC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 9999996 58999987653 488999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCC-CCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGS-EASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~-~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
......... ........++..|+|||.+. +. .++.++||||+|+++|+|++|+.||......
T Consensus 151 ~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~ 213 (330)
T cd07834 151 RGVDPDEDE-----KGFLTEYVVTRWYRAPELLL------------SSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI 213 (330)
T ss_pred Eeecccccc-----cccccccccccCcCCceeee------------cccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH
Confidence 875332110 01123346788999997654 33 6888999999999999999999999744211
Q ss_pred CccHHHHHHhh-c-chhhhhhcCccccccc----ccchh---hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH--H
Q 001908 917 GLTLHEFCKMA-L-PEKVMETVDPSLLLAW----SDGRR---RAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK--L 985 (997)
Q Consensus 917 ~~~~~~~~~~~-~-~~~~~~~~d~~~~~~~----~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~--L 985 (997)
. .+....... . +.......+......+ ..... .......+..+.+++..||+.+|++||++.++++. +
T Consensus 214 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~ 292 (330)
T cd07834 214 D-QLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYL 292 (330)
T ss_pred H-HHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccH
Confidence 0 011110000 0 0000000000000000 00000 00111245678899999999999999999999874 5
Q ss_pred HHHHH
Q 001908 986 CAARQ 990 (997)
Q Consensus 986 ~~~~~ 990 (997)
++..+
T Consensus 293 ~~~~~ 297 (330)
T cd07834 293 AQLHD 297 (330)
T ss_pred Hhhcc
Confidence 55443
No 373
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=301.59 Aligned_cols=266 Identities=21% Similarity=0.305 Sum_probs=216.2
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
..-+..|.+.+.||.|.||.||+++.+.+++.+|+|+.....+.+ +++..|+++++.. +|||++.+++++.-.+...+
T Consensus 15 pdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d-eEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 15 PDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE-EEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred CCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc-HHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 334567889999999999999999999999999999997554433 5567788899887 79999999999987777788
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+.+++|||||.+||..|.++.-.+. .+.|..+..|.+.++.|+.+||.. .++|||||-.|||++.++.||+.|
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~----rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvD 166 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGN----RLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVD 166 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhccc----chhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEee
Confidence 9999999999999999999876532 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+..+. .+........||+.|||||+++.. --....|+..+|+||+|++..||.-|.+|+.++
T Consensus 167 FGvSaQld--------sT~grRnT~iGtP~WMAPEViac~-------e~~d~tyd~R~D~WsLGITaIEladG~PPl~Dm 231 (953)
T KOG0587|consen 167 FGVSAQLD--------STVGRRNTFIGTPYWMAPEVIACD-------ESPDATYDYRSDLWSLGITAIEMAEGAPPLCDM 231 (953)
T ss_pred eeeeeeee--------cccccccCcCCCcccccceeeecc-------cCCCCCcccccchhhccceeehhcCCCCCccCc
Confidence 99998762 233445667899999999999874 334567888999999999999999999998754
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..- +..-.+. ..+......++....++-++|..|+..|-+.||++.++++
T Consensus 232 HPm--------------raLF~Ip------RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 232 HPM--------------RALFLIP------RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred chh--------------hhhccCC------CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 211 0000000 0111112235566788999999999999999999988864
No 374
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=5.9e-31 Score=294.39 Aligned_cols=274 Identities=22% Similarity=0.272 Sum_probs=198.6
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
++...+++|++.+.||+|+||.||+|....+++.||+|++.. ......+.+.+|++++++++||||+++.+++..
T Consensus 4 ~~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--- 80 (328)
T cd07856 4 TVFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFIS--- 80 (328)
T ss_pred ceeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEec---
Confidence 345577899999999999999999999998999999998853 223345678899999999999999999998642
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.....++|+||+ +++|.++++... ++...+..++.|+++|++|||+. +|+||||||+||++++++.+|
T Consensus 81 -~~~~~~lv~e~~-~~~L~~~~~~~~-------~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~ 148 (328)
T cd07856 81 -PLEDIYFVTELL-GTDLHRLLTSRP-------LEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLK 148 (328)
T ss_pred -CCCcEEEEeehh-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEE
Confidence 234689999998 669998887543 67778889999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
++|||.+..... ......++..|+|||.+.. +..++.++|||||||++|||++|+.||
T Consensus 149 l~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slG~il~el~tg~~~f 206 (328)
T cd07856 149 ICDFGLARIQDP-----------QMTGYVSTRYYRAPEIMLT-----------WQKYDVEVDIWSAGCIFAEMLEGKPLF 206 (328)
T ss_pred eCccccccccCC-----------CcCCCcccccccCceeeec-----------cCCcCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999999874311 1122456888999975431 246788999999999999999999998
Q ss_pred CcCcCCCccHHHHHHh--hcchhhhhh-cCcc---cccccccchhhhh---HHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 911 NCMFQGGLTLHEFCKM--ALPEKVMET-VDPS---LLLAWSDGRRRAK---VEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~--~~~~~~~~~-~d~~---~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
...... ......... ..++++.+. .+.. ...........+. ...+...+.+++.+|+..+|++||++.++
T Consensus 207 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~el 285 (328)
T cd07856 207 PGKDHV-NQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEA 285 (328)
T ss_pred CCCCHH-HHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 643210 000000000 001111110 0000 0000000000010 11234678899999999999999999998
Q ss_pred HHH
Q 001908 982 LAK 984 (997)
Q Consensus 982 l~~ 984 (997)
+..
T Consensus 286 l~~ 288 (328)
T cd07856 286 LAH 288 (328)
T ss_pred hcC
Confidence 764
No 375
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=7.2e-31 Score=289.87 Aligned_cols=258 Identities=24% Similarity=0.335 Sum_probs=191.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|.+..+++.||||+++... ......+.+|++++.+. .|+||+++++++. ....
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~-----~~~~ 88 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFI-----TDSD 88 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeee-----cCCe
Confidence 357888999999999999999998889999999997432 23445667788777666 4999999999964 3457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.+++|||+ ++++.+++..... .+++..+..++.|++.|++|||+.. +|+||||+|+||++++++.+||+|||
T Consensus 89 ~~~v~e~~-~~~l~~l~~~~~~-----~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 89 VFICMELM-STCLDKLLKRIQG-----PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred EEEEeecc-CcCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 99999998 4578777765331 4788899999999999999999732 89999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+...... .......++..|+|||.+.... ..+.++.++||||||+++|||++|+.||.....
T Consensus 161 ~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~--------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~ 223 (296)
T cd06618 161 ISGRLVDS---------KAKTRSAGCAAYMAPERIDPPD--------PNPKYDIRADVWSLGISLVELATGQFPYKNCKT 223 (296)
T ss_pred cchhccCC---------CcccCCCCCccccCHhhcCCCC--------CccccccchhHHHHHHHHHHHHhCCCCCCcchh
Confidence 98765221 1112235788999998765311 024578899999999999999999999864211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
. .+......... .+.. . ....+..++.+++.+||+.||++||++.++++.
T Consensus 224 ~----~~~~~~~~~~~-----~~~~----~------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 224 E----FEVLTKILQEE-----PPSL----P------PNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred H----HHHHHHHhcCC-----CCCC----C------CCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1 11111111000 0000 0 000234567899999999999999999999754
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=8.1e-31 Score=294.32 Aligned_cols=277 Identities=19% Similarity=0.240 Sum_probs=194.4
Q ss_pred cCccCCcccccCcceEEEEEECCC--CcEEEEEEeccc--chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGEN--GTFVAVKILNLM--QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
+|++.+.||+|+||.||+|+...+ +..||+|++... .....+.+.+|+++++++ +|+||+++++++... .....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~-~~~~~ 79 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVF-PGNFN 79 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeec-cccCC
Confidence 477889999999999999999877 889999998632 222346778899999999 599999999875432 12335
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++++||++ ++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 80 ~~~~~~e~~~-~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Df 149 (332)
T cd07857 80 ELYLYEELME-ADLHQIIRSGQ------PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDF 149 (332)
T ss_pred cEEEEEeccc-CCHHHHHhcCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcC
Confidence 6788999985 69999987543 478899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++........ .........||..|+|||.+.. ...++.++||||+||++|+|++|++||....
T Consensus 150 g~a~~~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~ 214 (332)
T cd07857 150 GLARGFSENPGE----NAGFMTEYVATRWYRAPEIMLS-----------FQSYTKAIDVWSVGCILAELLGRKPVFKGKD 214 (332)
T ss_pred CCceeccccccc----ccccccCcccCccccCcHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCC
Confidence 999865322111 1111233568999999976531 2457889999999999999999999987432
Q ss_pred CCCccHHHHHHhh--cc-hhhhhhcCcccc---cccccchhh---hhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA--LP-EKVMETVDPSLL---LAWSDGRRR---AKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~-~~~~~~~d~~~~---~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. .......... .+ +......++... ......... .........+.+++.+|++.||++|||+.|+++
T Consensus 215 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 215 YV-DQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HH-HHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 11 0011100000 00 000000000000 000000000 000112456889999999999999999999864
No 377
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=7e-31 Score=287.45 Aligned_cols=256 Identities=27% Similarity=0.403 Sum_probs=199.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 754 (997)
++|.+.+.||+|+||.||+|+.+.+++.||+|++... .....+.+.+|++++++++ |+||++++++ +.+.+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~-----~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYT-----FQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHH-----hcCCc
Confidence 4688999999999999999999989999999998642 2334567889999999998 9999999988 45566
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.+.. .+++..++.++.|++.|++|||+. +++|+||||+||+++.++.++++||
T Consensus 76 ~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df 146 (280)
T cd05581 76 NLYFVLEYAPNGELLQYIRKYG------SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDF 146 (280)
T ss_pred eEEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCC
Confidence 8999999999999999998764 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCc------------cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 835 GLARFLFARPFDTS------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 835 g~a~~~~~~~~~~~------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
|.+........... ...........++..|+|||... +..++.++||||+|+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~------------~~~~~~~~Di~slG~~l~~ 214 (280)
T cd05581 147 GTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN------------EKPAGKSSDLWALGCIIYQ 214 (280)
T ss_pred ccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhC------------CCCCChhhhHHHHHHHHHH
Confidence 99987643221100 00112233456788999996543 4557889999999999999
Q ss_pred HHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH----
Q 001908 903 MFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM---- 978 (997)
Q Consensus 903 lltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~---- 978 (997)
+++|+.||..... .... .. ... .+.. .+...+..+.+++.+||..+|++||++
T Consensus 215 l~~g~~p~~~~~~----~~~~-~~-----~~~-~~~~------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 271 (280)
T cd05581 215 MLTGKPPFRGSNE----YLTF-QK-----ILK-LEYS------------FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGY 271 (280)
T ss_pred HHhCCCCCCCccH----HHHH-HH-----HHh-cCCC------------CCCccCHHHHHHHHHHhcCCHhhCCCcccCH
Confidence 9999999874321 1100 00 000 0000 011224567899999999999999999
Q ss_pred HHHHH
Q 001908 979 RDVLA 983 (997)
Q Consensus 979 ~evl~ 983 (997)
.|+++
T Consensus 272 ~~ll~ 276 (280)
T cd05581 272 DELKA 276 (280)
T ss_pred HHHhc
Confidence 77654
No 378
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=8.4e-31 Score=295.50 Aligned_cols=280 Identities=20% Similarity=0.239 Sum_probs=201.5
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
..++....++|+..+.||+|+||.||+|....+++.||+|++... .....+.+.+|++++++++|+||+++++++...
T Consensus 9 ~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~ 88 (345)
T cd07877 9 NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA 88 (345)
T ss_pred HHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeec
Confidence 456667789999999999999999999999889999999998642 222346678899999999999999999986532
Q ss_pred C-cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 749 D-FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 749 ~-~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
. +......+++++++ +++|.+++.... +++..++.++.|+++|++|||+. +|+||||||+||++++++
T Consensus 89 ~~~~~~~~~~lv~~~~-~~~L~~~~~~~~-------l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 89 RSLEEFNDVYLVTHLM-GADLNNIVKCQK-------LTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ccccccccEEEEehhc-ccCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 2 12234578888887 789998886543 78899999999999999999999 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||+++.... ......++..|+|||.+.. ...++.++|||||||++|||++|+
T Consensus 158 ~~kl~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DvwslG~il~el~~g~ 215 (345)
T cd07877 158 ELKILDFGLARHTDD-----------EMTGYVATRWYRAPEIMLN-----------WMHYNQTVDIWSVGCIMAELLTGR 215 (345)
T ss_pred CEEEecccccccccc-----------cccccccCCCccCHHHHhC-----------ccCCCchhhHHHHHHHHHHHHhCC
Confidence 999999999875311 1223467889999976542 245788999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhh--cchhhhhhcCccccccc-------ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 908 RPTNCMFQGGLTLHEFCKMA--LPEKVMETVDPSLLLAW-------SDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
.||..... ...+....... .+......+.......+ ..............++.+++..|++.||++||++
T Consensus 216 ~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~ 294 (345)
T cd07877 216 TLFPGTDH-IDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 294 (345)
T ss_pred CCCCCCCH-HHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCH
Confidence 99864321 11111111111 01111111110000000 0000000000124567899999999999999999
Q ss_pred HHHHHH
Q 001908 979 RDVLAK 984 (997)
Q Consensus 979 ~evl~~ 984 (997)
.+++..
T Consensus 295 ~e~l~h 300 (345)
T cd07877 295 AQALAH 300 (345)
T ss_pred HHHhcC
Confidence 998753
No 379
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.97 E-value=1.4e-30 Score=285.65 Aligned_cols=269 Identities=23% Similarity=0.312 Sum_probs=196.9
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccch--hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.+.||+|++|.||+|....+++.+|+|+++.... .....+.+|++++++++|+||+++++++ ...+..++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~-----~~~~~~~~ 75 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVF-----RHKGDLYL 75 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhh-----ccCCCEEE
Confidence 5677899999999999999988999999999864322 3456788899999999999999999984 34568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|+||+++ ++.+++.... ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.+.
T Consensus 76 v~e~~~~-~l~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~ 146 (283)
T cd05118 76 VFEFMDT-DLYKLIKDRQ-----RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLAR 146 (283)
T ss_pred EEeccCC-CHHHHHHhhc-----ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeE
Confidence 9999965 9998887753 1478899999999999999999999 99999999999999999999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......++..|+|||.+.. ...++.++||||+|+++|+|+||+.||......+
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~~PE~~~~-----------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~- 206 (283)
T cd05118 147 SFGSPV--------RPYTHYVVTRWYRAPELLLG-----------DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEID- 206 (283)
T ss_pred ecCCCc--------ccccCccCcccccCcHHHhc-----------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHH-
Confidence 653211 11122457889999976542 2367889999999999999999999986432110
Q ss_pred cHHHHHHhh---cchhhhhhcC--ccccccc---ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA---LPEKVMETVD--PSLLLAW---SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~---~~~~~~~~~d--~~~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+....... .+.......+ ......+ ..........+...++.+++.+||+.||.+||++.+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 207 QLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred HHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 011110000 0000000000 0000000 000001122345678999999999999999999999975
No 380
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=5.3e-31 Score=297.03 Aligned_cols=274 Identities=21% Similarity=0.271 Sum_probs=197.2
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KG 752 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~ 752 (997)
+..++|++.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|++++++++|+|++++.+++...+. ..
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 4567899999999999999999999989999999998632 23344667889999999999999999887533221 12
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++|+||+ +++|.+++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~ 160 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ-------KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKIL 160 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEc
Confidence 23489999999 67999998763 388999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+..... ......++..|+|||.+.. ...++.++||||+||++||+++|+.||..
T Consensus 161 dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DvwslGv~l~elltg~~pf~~ 218 (343)
T cd07851 161 DFGLARHTDD-----------EMTGYVATRWYRAPEIMLN-----------WMHYNQTVDIWSVGCIMAELLTGKTLFPG 218 (343)
T ss_pred cccccccccc-----------cccCCcccccccCHHHHhC-----------CCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 9999975421 1223457889999987642 23578899999999999999999999864
Q ss_pred CcCCCccHHHHHHh--hcchhhhhhcC-cccc---cccccchhh---hhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKM--ALPEKVMETVD-PSLL---LAWSDGRRR---AKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~--~~~~~~~~~~d-~~~~---~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+...... ..+......+. .... .......+. ........++.+++.+|+..+|++|||+.|+++
T Consensus 219 ~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 219 SDHI-DQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred CChH-HHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 3211 011111000 00111111000 0000 000000000 001123567889999999999999999999865
No 381
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.5e-30 Score=293.10 Aligned_cols=276 Identities=21% Similarity=0.266 Sum_probs=198.0
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-c
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-F 750 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~ 750 (997)
+....++|++.+.||+|+||.||+|....+++.||||++... .......+.+|++++++++|+||+++++++.... .
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 344567899999999999999999999989999999998532 2223456789999999999999999999864321 1
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
......++||||+ +++|.+++... .+++..++.++.|+++|++|||+. +|+||||||+||+++.++.+|
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~-------~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~k 158 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE-------KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELK 158 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEE
Confidence 1123568999999 77999888653 378899999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
++|||.+..... ......+++.|+|||.+.. ...++.++||||+||++|++++|+.||
T Consensus 159 l~dfg~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~ll~~l~~g~~pf 216 (343)
T cd07880 159 ILDFGLARQTDS-----------EMTGYVVTRWYRAPEVILN-----------WMHYTQTVDIWSVGCIMAEMLTGKPLF 216 (343)
T ss_pred Eeeccccccccc-----------CccccccCCcccCHHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 999999875411 1123457889999976642 134788999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhh--cchhhhhhcCcccc----cc---cccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 911 NCMFQGGLTLHEFCKMA--LPEKVMETVDPSLL----LA---WSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~----~~---~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
...... ....+..... .+..+...+..... .. ............+..++.+++.+|++.||++|||+.++
T Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~ 295 (343)
T cd07880 217 KGHDHL-DQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEA 295 (343)
T ss_pred CCCCHH-HHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHH
Confidence 743211 0111111100 01111111110000 00 00000001112334568899999999999999999998
Q ss_pred HH
Q 001908 982 LA 983 (997)
Q Consensus 982 l~ 983 (997)
++
T Consensus 296 l~ 297 (343)
T cd07880 296 LA 297 (343)
T ss_pred hc
Confidence 83
No 382
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=8e-31 Score=283.73 Aligned_cols=251 Identities=22% Similarity=0.289 Sum_probs=191.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
+|.+.++||+|+||.||++++...+..+++|+.+.. .......+.+|++++++++||||+++++++ ...+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-----~~~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASF-----LERD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHH-----hcCC
Confidence 478889999999999999999877777777776532 222344677899999999999999999884 3455
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++...... ...+++..++.++.|++.|++|||+. +++|+||||+||++++ +.+|++||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~ 149 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHT--GKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDF 149 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhc--ccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeeccc
Confidence 789999999999999998753211 12588999999999999999999999 9999999999999975 67999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++...... .......|++.|+|||.+ .+..++.++||||||+++|+|++|..||...
T Consensus 150 g~~~~~~~~~--------~~~~~~~~~~~~~~pe~~------------~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~- 208 (260)
T cd08222 150 GVSRLLMGSC--------DLATTFTGTPYYMSPEAL------------KHQGYDSKSDIWSLGCILYEMCCLAHAFEGQ- 208 (260)
T ss_pred CceeecCCCc--------ccccCCCCCcCccCHHHH------------ccCCCCchhhHHHHHHHHHHHHhCCCCCCCc-
Confidence 9987653211 112234578899999654 3456788999999999999999999998632
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+..... .....+. .+..++.++.+++.+||..+|++||++.|+++
T Consensus 209 ----~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 209 ----NFLSVVLRI-----VEGPTPS------------LPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ----cHHHHHHHH-----HcCCCCC------------CcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 111111111 0011111 11234567889999999999999999999975
No 383
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=1.4e-30 Score=286.49 Aligned_cols=258 Identities=21% Similarity=0.278 Sum_probs=193.9
Q ss_pred cCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccc----hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQ----KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 751 (997)
+|++.+.||+|+||.||+|+.. .+++.||||+++... ....+.+.+|+++++++ +|+||+++.++ +.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~~ 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYA-----FQ 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhhee-----ee
Confidence 4778899999999999999864 467889999986322 22345678899999999 69999999987 44
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
.....++||||+++|+|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||+++.++.+++
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l 146 (288)
T cd05583 76 TDTKLHLILDYVNGGELFTHLYQRE------HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVL 146 (288)
T ss_pred cCCEEEEEEecCCCCcHHHHHhhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEE
Confidence 5668999999999999999987643 378889999999999999999998 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+++...... ........|+..|+|||.+... ....+.++||||||+++|||++|..||.
T Consensus 147 ~dfg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Dv~slG~il~el~tg~~p~~ 209 (288)
T cd05583 147 TDFGLSKEFLAEE-------EERAYSFCGTIEYMAPEVIRGG----------SGGHDKAVDWWSLGVLTFELLTGASPFT 209 (288)
T ss_pred EECcccccccccc-------ccccccccCCccccCHHHhcCC----------CCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence 9999987653211 1111234588899999765421 1236789999999999999999999986
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.... .....+....... .++. .+......+.+++.+||..+|++|||++++.+.|..
T Consensus 210 ~~~~-~~~~~~~~~~~~~------~~~~------------~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 210 VDGE-QNSQSEISRRILK------SKPP------------FPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred cCcc-cchHHHHHHHHHc------cCCC------------CCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 3211 1111111111100 0000 111234567899999999999999999888776653
No 384
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=2.5e-30 Score=284.79 Aligned_cols=254 Identities=21% Similarity=0.303 Sum_probs=191.1
Q ss_pred cCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccc----hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQ----KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~ 751 (997)
+|++.+.||+|+||.||+|+.. .+|+.||+|+++... ....+.+.+|+++++++ +|++|+++++++ .
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-----~ 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF-----Q 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEe-----e
Confidence 4788899999999999999874 478899999986422 22346678899999999 599999998874 4
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
.....++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||+++.++++||
T Consensus 76 ~~~~~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl 146 (290)
T cd05613 76 TDTKLHLILDYINGGELFTHLSQRE------RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVL 146 (290)
T ss_pred cCCeEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEE
Confidence 4568899999999999999998654 367888999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||++....... ........|+..|+|||.+... ...++.++||||||+++|+|++|+.||.
T Consensus 147 ~dfg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Dv~slG~~l~~ll~g~~p~~ 209 (290)
T cd05613 147 TDFGLSKEFHEDE-------VERAYSFCGTIEYMAPDIVRGG----------DGGHDKAVDWWSMGVLMYELLTGASPFT 209 (290)
T ss_pred eeCccceeccccc-------ccccccccCCcccCChhhccCC----------CCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence 9999987542111 1112235688999999765421 1346788999999999999999999986
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
.... .....+........ .+. .+..+...+.+++.+||..+|++|| ++.+++.
T Consensus 210 ~~~~-~~~~~~~~~~~~~~------~~~------------~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 210 VDGE-KNSQAEISRRILKS------EPP------------YPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred cCCc-cccHHHHHHHhhcc------CCC------------CCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 3211 11122221111000 000 0112345678999999999999997 6666654
No 385
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=2.1e-30 Score=292.10 Aligned_cols=277 Identities=23% Similarity=0.277 Sum_probs=195.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 754 (997)
.++|...+.||+|+||.||+|++..+++.||+|++... .......+.+|++++++++|+||+++++++.... .....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 46899999999999999999999888999999998632 2223456789999999999999999999875432 11234
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++|+||+. .++.++... .+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++||
T Consensus 94 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~df 161 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMGH--------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDF 161 (342)
T ss_pred eEEEEecccc-cCHHHHHcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeC
Confidence 5799999995 477776531 377889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++.... ......++..|+|||.+.. +..++.++|||||||++|||++|+.||....
T Consensus 162 g~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Dv~slGvil~el~~g~~pf~~~~ 219 (342)
T cd07879 162 GLARHADA-----------EMTGYVVTRWYRAPEVILN-----------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 219 (342)
T ss_pred CCCcCCCC-----------CCCCceeeecccChhhhcC-----------ccccCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99875311 1123467889999976532 2457889999999999999999999997431
Q ss_pred CCCccHHHHHHhh-cc-hhhhhhcCccccccc-------ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH-
Q 001908 915 QGGLTLHEFCKMA-LP-EKVMETVDPSLLLAW-------SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK- 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~~-------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~- 984 (997)
.. ..+....... .+ .......+......+ ...............+.+++.+||+.||++||++.|++..
T Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~ 298 (342)
T cd07879 220 YL-DQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHP 298 (342)
T ss_pred HH-HHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 10 0111111100 00 011111110000000 0000000001234567899999999999999999999843
Q ss_pred -HHHHH
Q 001908 985 -LCAAR 989 (997)
Q Consensus 985 -L~~~~ 989 (997)
+++.+
T Consensus 299 ~f~~~~ 304 (342)
T cd07879 299 YFDSFR 304 (342)
T ss_pred chhhcc
Confidence 55544
No 386
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.7e-31 Score=279.14 Aligned_cols=269 Identities=23% Similarity=0.342 Sum_probs=201.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---c----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---Q----KGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
..++|-..+.||+|||++||+|.+-...+.||||+-... . +.-.+...+|.++.+.++||.||++|+|+..
T Consensus 461 Ln~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl-- 538 (775)
T KOG1151|consen 461 LNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL-- 538 (775)
T ss_pred hHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee--
Confidence 346777889999999999999999888899999986421 1 1224577899999999999999999999742
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---C
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---D 826 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~ 826 (997)
+.+.+|-|.|||+|-+|+-|++... ..++.+++.|+.||+.||.||.+. .|+|+|=|+||.|||+.+ .
T Consensus 539 --DtdsFCTVLEYceGNDLDFYLKQhk------lmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 539 --DTDSFCTVLEYCEGNDLDFYLKQHK------LMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred --ccccceeeeeecCCCchhHHHHhhh------hhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCccc
Confidence 3567899999999999999999876 478889999999999999999987 679999999999999954 4
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
|.+||.|||+++.+....++.. ..........||++|.+||.+.-.. .....+.|+||||.|||+|.++.|
T Consensus 610 GeIKITDFGLSKIMdddSy~~v-dGmeLTSQgAGTYWYLPPEcFvVgk--------ePPKIsnKVDVWSvGVIFyQClYG 680 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSV-DGMELTSQGAGTYWYLPPECFVVGK--------EPPKISNKVDVWSVGVIFYQCLYG 680 (775)
T ss_pred ceeEeeecchhhhccCCccCcc-cceeeecccCceeeecCcceeecCC--------CCCccccceeeEeeehhhhhhhcc
Confidence 7899999999999866554332 2223344568999999998765211 134578899999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
+.||....... ++-+.........+.....|.+ ..+-..+|.+|+.+.-++|....++.
T Consensus 681 rKPFGhnqsQQ-dILqeNTIlkAtEVqFP~KPvV----------------sseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 681 RKPFGHNQSQQ-DILQENTILKATEVQFPPKPVV----------------SSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred CCCCCCchhHH-HHHhhhchhcceeccCCCCCcc----------------CHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 99997542221 2222111111112222222222 12345678888888888887776664
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=3.7e-31 Score=251.70 Aligned_cols=213 Identities=23% Similarity=0.342 Sum_probs=169.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhh-cCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRN-TRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++......||+|+||.|-+-++..+|+..|+|.+... ..+..++..+|+.+..+ ..+|.+|+++|. +..+..
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa-----~~regd 119 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGA-----LFREGD 119 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehh-----hhcccc
Confidence 34455567899999999999999999999999999743 34445677888887654 579999999997 455678
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++.||.| .-||..+.++.-... ...++..+=+||..|.+||.|||++. .++|||+||+|||++.+|+||+||||
T Consensus 120 vwIcME~M-~tSldkfy~~v~~~g--~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 120 VWICMELM-DTSLDKFYRKVLKKG--GTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred EEEeHHHh-hhhHHHHHHHHHhcC--CcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccc
Confidence 99999999 448887766533221 24677788899999999999999986 89999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.+-.+.+ ........|-..|||||.+.. |.- ...|+.++||||+|+.+.||.+++.||+....
T Consensus 195 IsG~L~d---------SiAkt~daGCkpYmaPEri~~-------e~n-~~gY~vksDvWSLGItmiElA~lr~PY~~w~t 257 (282)
T KOG0984|consen 195 ISGYLVD---------SIAKTMDAGCKPYMAPERINP-------ELN-QKGYSVKSDVWSLGITMIEMAILRFPYESWGT 257 (282)
T ss_pred cceeehh---------hhHHHHhcCCCccCChhhcCc-------ccC-cccceeehhhhhhhhhhhhhhhccccccccCC
Confidence 9876522 112222467889999999975 332 34899999999999999999999999986544
Q ss_pred CC
Q 001908 916 GG 917 (997)
Q Consensus 916 ~~ 917 (997)
..
T Consensus 258 pF 259 (282)
T KOG0984|consen 258 PF 259 (282)
T ss_pred HH
Confidence 43
No 388
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.97 E-value=4.7e-30 Score=281.30 Aligned_cols=269 Identities=23% Similarity=0.312 Sum_probs=195.1
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|+..+.||+|+||.||+|+...+++.||+|++.... ....+.+..|++++++++|+|++++++++. +.+..++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~-----~~~~~~~ 75 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIH-----TERKLYL 75 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhh-----cCCceEE
Confidence 566789999999999999999889999999997542 333467788999999999999999999853 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
||||++ ++|.+++.+.. ..+++..+++++.|++.|++|||+. +|+||||+|+||++++++.+||+|||.+.
T Consensus 76 v~e~~~-~~l~~~i~~~~-----~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~ 146 (282)
T cd07829 76 VFEYCD-MDLKKYLDKRP-----GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLAR 146 (282)
T ss_pred EecCcC-cCHHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCccc
Confidence 999997 59999998753 1488999999999999999999999 99999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
...... .......++..|+|||.+.. ...++.++|||||||++||+++|++||...... .
T Consensus 147 ~~~~~~--------~~~~~~~~~~~~~aPE~~~~-----------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~ 206 (282)
T cd07829 147 AFGIPL--------RTYTHEVVTLWYRAPEILLG-----------SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-D 206 (282)
T ss_pred ccCCCc--------cccCccccCcCcCChHHhcC-----------CcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-H
Confidence 652211 11122345778999976542 236788999999999999999999998643211 0
Q ss_pred cHHHHHHhh---cchhhhhhcCcc-ccccc---ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMA---LPEKVMETVDPS-LLLAW---SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~---~~~~~~~~~d~~-~~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+....... ....+....+-. ....+ ...............+.+++.+||..+|++||++.|++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 207 QLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred HHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 011111100 000110110000 00000 000000111122457899999999999999999999875
No 389
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.9e-31 Score=290.18 Aligned_cols=241 Identities=25% Similarity=0.252 Sum_probs=191.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+++|.+...+|.|+|+.|..+....+++..|||++.... .+-.+|+.++... +||||+++.++ +.+..+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v-----~~~~~~ 390 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDV-----YEDGKE 390 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecce-----ecCCce
Confidence 3567888888999999999999999999999999997542 2334577666555 79999999999 456779
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee-CCCCcEEEccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL-DHDMVAHVSDF 834 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll-~~~~~~kl~DF 834 (997)
.|+|||.+.++-+.+.+.... .....+..|+.+|+.|++|||++ ||||||+||+|||+ ++.++++|+||
T Consensus 391 ~~~v~e~l~g~ell~ri~~~~-------~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyF 460 (612)
T KOG0603|consen 391 IYLVMELLDGGELLRRIRSKP-------EFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYF 460 (612)
T ss_pred eeeeehhccccHHHHHHHhcc-------hhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEe
Confidence 999999999999888888765 22367788999999999999999 99999999999999 69999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++..... ....+-|..|+|||++. ..+|++++||||||++||+|++|+.||....
T Consensus 461 G~a~~~~~~-----------~~tp~~t~~y~APEvl~------------~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P 517 (612)
T KOG0603|consen 461 GFWSELERS-----------CDTPALTLQYVAPEVLA------------IQEYTEACDWWSLGVLLYEMLTGRTLFAAHP 517 (612)
T ss_pred chhhhCchh-----------hcccchhhcccChhhhc------------cCCCCcchhhHHHHHHHHHHHhCCCccccCC
Confidence 999876221 33346688999997765 5789999999999999999999999998654
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+ .+...+....+.. +...+.-.+|+.+|++.||.+||+|.++.+
T Consensus 518 ~~----~ei~~~i~~~~~s--------------------~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 518 AG----IEIHTRIQMPKFS--------------------ECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred ch----HHHHHhhcCCccc--------------------cccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 43 1111111111111 122345578999999999999999999864
No 390
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=7.4e-30 Score=309.51 Aligned_cols=147 Identities=29% Similarity=0.483 Sum_probs=130.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|.+.++||+|+||+||+|.+..+++.||||+++.. .......+.+|+++++.++|+||+++++++ ....+
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~~ 78 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL-----QSANN 78 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE-----EECCE
Confidence 5789999999999999999999989999999998642 233446788999999999999999999884 34568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++++|.+++.... .+++..++.++.||+.||+|||.. +|+||||||+|||++.++.+||+|||
T Consensus 79 ~~lVmEy~~g~~L~~li~~~~------~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 79 VYLVMEYLIGGDVKSLLHIYG------YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred EEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 999999999999999997654 367888999999999999999999 99999999999999999999999999
Q ss_pred cchh
Q 001908 836 LARF 839 (997)
Q Consensus 836 ~a~~ 839 (997)
+++.
T Consensus 150 ls~~ 153 (669)
T cd05610 150 LSKV 153 (669)
T ss_pred CCcc
Confidence 9863
No 391
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=282.03 Aligned_cols=243 Identities=21% Similarity=0.328 Sum_probs=194.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEec---ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN---LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~---~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++.....||-|+||+|=++..+.....+|+|+++ ..+..+.++...|-.+|...+.|.||++|.. |.+..+
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT-----frd~ky 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT-----FRDSKY 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH-----hccchh
Confidence 34556678999999999999986554458888886 3456667889999999999999999999987 677889
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
+|++||-|-||.+...+++++ .++..+.+.++..+++|++|||++ +||+||+||+|.+++.+|-+|+.|||
T Consensus 495 vYmLmEaClGGElWTiLrdRg------~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRG------SFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcC------CcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 999999999999999999887 477788889999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.+ ........++||+.|+|||++ .....+.++|.||+|+++||+++|.+||....
T Consensus 566 FAKki---------~~g~KTwTFcGTpEYVAPEII------------LnKGHD~avDyWaLGIli~ELL~G~pPFs~~d- 623 (732)
T KOG0614|consen 566 FAKKI---------GSGRKTWTFCGTPEYVAPEII------------LNKGHDRAVDYWALGILIYELLTGSPPFSGVD- 623 (732)
T ss_pred hHHHh---------ccCCceeeecCCcccccchhh------------hccCcchhhHHHHHHHHHHHHHcCCCCCCCCc-
Confidence 99987 344556678999999999555 45778899999999999999999999997431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
.+..+......-..++. |......-.++|++.++.+|.+|..
T Consensus 624 ---pmktYn~ILkGid~i~~-----------------Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 624 ---PMKTYNLILKGIDKIEF-----------------PRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hHHHHHHHHhhhhhhhc-----------------ccccchhHHHHHHHHHhcCcHhhhc
Confidence 12222111100011111 1112233457888999999999985
No 392
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.9e-29 Score=271.15 Aligned_cols=237 Identities=28% Similarity=0.358 Sum_probs=187.7
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
||+|+||.||++....+++.||+|+++... ....+.+..|++++++++|+|+++++++ +......++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~-----~~~~~~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYA-----FQTEEKLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHH-----eecCCeeEEEEecC
Confidence 699999999999998889999999986432 2245678999999999999999999987 44567899999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccC
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFAR 843 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~ 843 (997)
++++|.+++.... .+++..+..++.|++.|+.|+|+. +++|+||+|+||+++.++.++++|||.+......
T Consensus 76 ~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~ 146 (250)
T cd05123 76 PGGELFSHLSKEG------RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSE 146 (250)
T ss_pred CCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccC
Confidence 9999999998764 478899999999999999999998 9999999999999999999999999998765221
Q ss_pred CCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHH
Q 001908 844 PFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEF 923 (997)
Q Consensus 844 ~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~ 923 (997)
. .......++..|+|||... +...+.++|+||||+++||+++|..||..... .+.
T Consensus 147 ~--------~~~~~~~~~~~~~~Pe~~~------------~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~ 201 (250)
T cd05123 147 G--------SRTNTFCGTPEYLAPEVLL------------GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEI 201 (250)
T ss_pred C--------CcccCCcCCccccChHHhC------------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHH
Confidence 1 1223456788999996543 45578899999999999999999999864321 111
Q ss_pred HHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 924 CKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 924 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
...... .... .+...+..+.+++.+||..||++||++.+
T Consensus 202 ~~~~~~------~~~~------------~~~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 202 YEKILK------DPLR------------FPEFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred HHHHhc------CCCC------------CCCCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 111110 0000 11112456789999999999999999944
No 393
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-31 Score=280.87 Aligned_cols=195 Identities=28% Similarity=0.441 Sum_probs=165.8
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEe
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
.++||+|.||+||-|+++.+|+.||||++.+ ........++.|+.+|++++||.||.+... ++.++..++|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M-----~ET~ervFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECM-----FETPERVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEe-----ecCCceEEEEeh
Confidence 5799999999999999999999999999973 334455788999999999999999999887 566779999999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEEEcccccch
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLAR 838 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DFg~a~ 838 (997)
-+ .|+..+.|-.... ..++......+..||+.||.|||.+ +|+|+|+||+|||+.+.. .+||+|||+|+
T Consensus 644 Kl-~GDMLEMILSsEk----gRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 644 KL-HGDMLEMILSSEK----GRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred hh-cchHHHHHHHhhc----ccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccccee
Confidence 99 4566666554321 1377778888999999999999999 999999999999997543 89999999999
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
.+.. .......+||+.|.|||++. ...|...-||||.|||+|.-++|..||..
T Consensus 716 iIgE---------ksFRrsVVGTPAYLaPEVLr------------nkGyNrSLDMWSVGVIiYVsLSGTFPFNE 768 (888)
T KOG4236|consen 716 IIGE---------KSFRRSVVGTPAYLAPEVLR------------NKGYNRSLDMWSVGVIIYVSLSGTFPFNE 768 (888)
T ss_pred ecch---------hhhhhhhcCCccccCHHHHh------------hccccccccceeeeEEEEEEecccccCCC
Confidence 8743 33445678999999997776 47788999999999999999999999984
No 394
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=1.1e-29 Score=270.60 Aligned_cols=221 Identities=20% Similarity=0.153 Sum_probs=171.7
Q ss_pred cCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHH
Q 001908 690 GSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLE 769 (997)
Q Consensus 690 G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 769 (997)
|.+|.||+++++.+++.||+|++.... .+.+|...+....||||+++++++ ...+..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYI-----VSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhhe-----ecCCeEEEEEecCCCCCHH
Confidence 899999999999999999999986542 223455555556799999999984 4456899999999999999
Q ss_pred HHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcc
Q 001908 770 EWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849 (997)
Q Consensus 770 ~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 849 (997)
+++.+.. .+++..+..++.|+++|++|||++ +|+||||||+||+++.++.++++|||.+.....
T Consensus 74 ~~l~~~~------~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~------- 137 (237)
T cd05576 74 SHISKFL------NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVED------- 137 (237)
T ss_pred HHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccc-------
Confidence 9997654 378899999999999999999999 999999999999999999999999998765421
Q ss_pred ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcc
Q 001908 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALP 929 (997)
Q Consensus 850 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 929 (997)
......++..|+|||.. .+..++.++||||+||++|||++|+.|+......
T Consensus 138 ----~~~~~~~~~~y~aPE~~------------~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------- 188 (237)
T cd05576 138 ----SCDGEAVENMYCAPEVG------------GISEETEACDWWSLGAILFELLTGKTLVECHPSG------------- 188 (237)
T ss_pred ----ccccCCcCccccCCccc------------CCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-------------
Confidence 11223456789999644 3566788999999999999999999886522110
Q ss_pred hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 930 EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 930 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
....... ..+......+.+++.+|++.||++||++.
T Consensus 189 --~~~~~~~------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~ 224 (237)
T cd05576 189 --INTHTTL------------NIPEWVSEEARSLLQQLLQFNPTERLGAG 224 (237)
T ss_pred --ccccccc------------CCcccCCHHHHHHHHHHccCCHHHhcCCC
Confidence 0000000 00112245678899999999999999973
No 395
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=2e-30 Score=250.13 Aligned_cols=269 Identities=22% Similarity=0.337 Sum_probs=199.4
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 755 (997)
..++|++.+++|+|.|++||.|..-.+.++++||++++... +.+.+|+.+|+.+. ||||++++++..++. ...
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~L~DiV~Dp~---Skt 109 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIKLLDIVKDPE---SKT 109 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeeehhhhhcCcc---ccC
Confidence 34689999999999999999999888999999999986544 67889999999996 999999999866432 455
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDF 834 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DF 834 (997)
..+|+||+.+.+....... ++...++.+..++++||+|+|++ ||.|||+||.|++||.. -..+++|+
T Consensus 110 paLiFE~v~n~Dfk~ly~t---------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 110 PSLIFEYVNNTDFKQLYPT---------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred chhHhhhhccccHHHHhhh---------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 7899999999888776643 66678899999999999999999 99999999999999965 47999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|.+.-+ . ..-...+.+..|--||.+... ..|+.+-|+|||||++..|+..+.||-...
T Consensus 178 GLAEFYHp-----~----~eYnVRVASRyfKGPELLVdy-----------~~YDYSLD~WS~GcmlA~miFrkepFFhG~ 237 (338)
T KOG0668|consen 178 GLAEFYHP-----G----KEYNVRVASRYFKGPELLVDY-----------QMYDYSLDMWSLGCMLASMIFRKEPFFHGH 237 (338)
T ss_pred chHhhcCC-----C----ceeeeeeehhhcCCchheeec-----------hhccccHHHHHHHHHHHHHHhccCcccCCC
Confidence 99988622 1 122234567788899888643 457888999999999999999999987554
Q ss_pred CCCccHHHHHHhhcchhh-------hhhcCcccccccccchhhh--------hHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 915 QGGLTLHEFCKMALPEKV-------METVDPSLLLAWSDGRRRA--------KVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~-------~~~~d~~~~~~~~~~~~~~--------~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
+....++..+...-.+.. .-..||....-.....+.+ ...-..++..+++.+.++.|..+|+|++
T Consensus 238 dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTak 317 (338)
T KOG0668|consen 238 DNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAK 317 (338)
T ss_pred CCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchH
Confidence 443333333222111111 1112333222111111100 0001125667999999999999999999
Q ss_pred HHHH
Q 001908 980 DVLA 983 (997)
Q Consensus 980 evl~ 983 (997)
|+++
T Consensus 318 Eam~ 321 (338)
T KOG0668|consen 318 EAMA 321 (338)
T ss_pred HHhc
Confidence 9875
No 396
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-30 Score=267.09 Aligned_cols=203 Identities=25% Similarity=0.352 Sum_probs=168.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 752 (997)
...+|.+..+||+|+||.|-+|..+.+.+.||||+++.. ....++--+.|-++|+--. -|.++++..+ |+.
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHSc-----FQT 421 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSC-----FQT 421 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHH-----hhh
Confidence 345799999999999999999999999999999999743 2222333355666776554 5566666655 666
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
-+.+|+||||+.||+|--++++.+ .+.+..+..+|.+||-||-|||++ ||++||+|..||+++.+|++||+
T Consensus 422 mDRLyFVMEyvnGGDLMyhiQQ~G------kFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~ 492 (683)
T KOG0696|consen 422 MDRLYFVMEYVNGGDLMYHIQQVG------KFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIA 492 (683)
T ss_pred hhheeeEEEEecCchhhhHHHHhc------ccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEee
Confidence 779999999999999999999877 356677888999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+++.- .........++||+.|+|||++ ..++|+.++|+|||||++|||+.|++||+.
T Consensus 493 DFGmcKEn--------i~~~~TTkTFCGTPdYiAPEIi------------~YqPYgksvDWWa~GVLLyEmlaGQpPFdG 552 (683)
T KOG0696|consen 493 DFGMCKEN--------IFDGVTTKTFCGTPDYIAPEII------------AYQPYGKSVDWWAFGVLLYEMLAGQPPFDG 552 (683)
T ss_pred eccccccc--------ccCCcceeeecCCCcccccceE------------EecccccchhHHHHHHHHHHHHcCCCCCCC
Confidence 99999753 2233445568999999999555 468999999999999999999999999984
Q ss_pred C
Q 001908 913 M 913 (997)
Q Consensus 913 ~ 913 (997)
.
T Consensus 553 e 553 (683)
T KOG0696|consen 553 E 553 (683)
T ss_pred C
Confidence 3
No 397
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=3.4e-29 Score=295.87 Aligned_cols=285 Identities=18% Similarity=0.169 Sum_probs=174.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCC----CcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeec-cCcC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGEN----GTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSS-IDFK 751 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~-~~~~ 751 (997)
..++|...++||+|+||.||+|++..+ +..||+|++...... +.+..| .++...+.+++.++..+.. ....
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 567899999999999999999999888 899999987643221 111111 1222222223222211111 0013
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCC--------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQ--------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~--------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
.....++|+||+++++|.+++...... ..........+..++.|++.||+|||++ +|+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCC
Confidence 456799999999999999999764310 0001112334668999999999999999 99999999
Q ss_pred CCCeeeCC-CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCcc----------ccCCCCC
Q 001908 818 PSNVLLDH-DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCL----------EYGMGSE 886 (997)
Q Consensus 818 ~~NIll~~-~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~----------e~~~~~~ 886 (997)
|+|||++. ++.+||+|||+|+..... .........+|+.|+|||.+......+.. .......
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~-------~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~ 355 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG-------INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLN 355 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc-------cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcccc
Confidence 99999986 689999999999765211 11122345789999999976432211000 0011223
Q ss_pred CCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhc----c-hhhhhhcCcccccccccchhhhhHHHHHHHHH
Q 001908 887 ASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMAL----P-EKVMETVDPSLLLAWSDGRRRAKVEECLVTVI 961 (997)
Q Consensus 887 ~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~----~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~ 961 (997)
+..++||||+||++|||+++..|++. ....+..... . ..+.....+......... ............
T Consensus 356 ~~~k~DVwSlGviL~el~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~~~~~~ 427 (566)
T PLN03225 356 LPDRFDIYSAGLIFLQMAFPNLRSDS------NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRG--FEVLDLDGGAGW 427 (566)
T ss_pred CCCCcccHHHHHHHHHHHhCcCCCch------HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhh--hhhccccchHHH
Confidence 55678999999999999997766432 1111111110 0 011111111100000000 000001122345
Q ss_pred HHHhhcCCCCCCCCCCHHHHHH
Q 001908 962 RIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 962 ~li~~cl~~dP~~Rps~~evl~ 983 (997)
+++.+|+..||++|||++|+++
T Consensus 428 dLi~~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 428 ELLKSMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHHHHHccCCcccCCCHHHHhC
Confidence 8999999999999999999976
No 398
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.9e-29 Score=264.40 Aligned_cols=137 Identities=25% Similarity=0.448 Sum_probs=117.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC--------CCCcceEEeeeeccC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR--------HRNLIKIITVCSSID 749 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 749 (997)
..+|.+.++||.|.|++||+|.+..+.+.||+|+.+..... .+....||++|++++ ..+||++++.+....
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhY-tEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHY-TEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHH-HHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 36899999999999999999999999999999999744322 356688999999873 347999999876543
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
.+..++|||+|+. |.+|..+|....-+ .++...+++|++||+.||+|||++| +|+|-||||+|||+
T Consensus 156 -pNG~HVCMVfEvL-GdnLLklI~~s~Yr----Glpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 156 -PNGQHVCMVFEVL-GDNLLKLIKYSNYR----GLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred -CCCcEEEEEehhh-hhHHHHHHHHhCCC----CCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 4567899999999 77999999986532 4888999999999999999999999 99999999999999
No 399
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=5.4e-29 Score=270.95 Aligned_cols=212 Identities=23% Similarity=0.342 Sum_probs=174.0
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
-|...+.||-|+||+|.++...++...||+|.+++.+ ..++.....|-+||...+.+.||++|-. |++++.+
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS-----FQDkdnL 704 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS-----FQDKDNL 704 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE-----eccCCce
Confidence 4667789999999999999998899999999987443 4456778899999999999999999865 7888999
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+||||++||++-.+|.+.+ .+.+..++.++.++.+|+++.|.. |+|||||||+|||||.+|++|+.|||+
T Consensus 705 YFVMdYIPGGDmMSLLIrmg------IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGL 775 (1034)
T KOG0608|consen 705 YFVMDYIPGGDMMSLLIRMG------IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGL 775 (1034)
T ss_pred EEEEeccCCccHHHHHHHhc------cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccc
Confidence 99999999999999998876 467777788888999999999999 999999999999999999999999999
Q ss_pred chhcc---cCCCCCcc-------------------------------ccccccccccccccccCCcchhcccccCccccC
Q 001908 837 ARFLF---ARPFDTSM-------------------------------ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYG 882 (997)
Q Consensus 837 a~~~~---~~~~~~~~-------------------------------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~ 882 (997)
+.-.. +..+.... .........+||+.|+|||++.
T Consensus 776 CTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~----------- 844 (1034)
T KOG0608|consen 776 CTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA----------- 844 (1034)
T ss_pred cccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc-----------
Confidence 76431 00000000 0001112346999999997765
Q ss_pred CCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 883 MGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 883 ~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...|+..+|+||.|||||||+.|++||......+
T Consensus 845 -r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 845 -RTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGE 878 (1034)
T ss_pred -ccCccccchhhHhhHHHHHHhhCCCCccCCCCCc
Confidence 4678999999999999999999999998665443
No 400
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7e-29 Score=251.29 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=195.3
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (997)
..++|+..++||+|+|+.|..++.+.+.+.||+|++++. .++..+-.+.|-.+..+. +||.+|-+..+ |+.
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhsc-----fqt 322 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSC-----FQT 322 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhh-----hcc
Confidence 347899999999999999999999999999999999742 334445556777777766 79999888776 777
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
+...++|.||++||+|--++++++ .+++.+++.+..+|.-|+.|||++ ||++||+|..|+++|..|++|+.
T Consensus 323 esrlffvieyv~ggdlmfhmqrqr------klpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghiklt 393 (593)
T KOG0695|consen 323 ESRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLT 393 (593)
T ss_pred cceEEEEEEEecCcceeeehhhhh------cCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeec
Confidence 889999999999999999888876 477888999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+++.-. ........++|||.|.|||++. +..|+.++|+|++||+++||..|+.||+.
T Consensus 394 dygmcke~l--------~~gd~tstfcgtpnyiapeilr------------geeygfsvdwwalgvlmfemmagrspfdi 453 (593)
T KOG0695|consen 394 DYGMCKEGL--------GPGDTTSTFCGTPNYIAPEILR------------GEEYGFSVDWWALGVLMFEMMAGRSPFDI 453 (593)
T ss_pred ccchhhcCC--------CCCcccccccCCCcccchhhhc------------ccccCceehHHHHHHHHHHHHcCCCCcce
Confidence 999997542 2334455689999999996654 67899999999999999999999999984
Q ss_pred Cc--CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 913 MF--QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 913 ~~--~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
.. ..+.+.+.+.-+.+-++-..+.+ .....-..+++.-++.||++|.
T Consensus 454 vgm~n~d~ntedylfqvilekqiripr-----------------slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 454 VGMDNPDMNTEDYLFQVILEKQIRIPR-----------------SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred ecCCCcccchhHHHHHHHhhhcccccc-----------------eeehhhHHHHHHhhcCCcHHhc
Confidence 32 22333444433322221111111 1112233577788899999886
No 401
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-30 Score=253.61 Aligned_cols=206 Identities=22% Similarity=0.324 Sum_probs=165.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.+.+..+.||-|+||.||.+++..+|+.||+|++...- -...+.+.+|++++..++|.|++..+++.......--...
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 35667899999999999999999999999999886432 2345788999999999999999998887433221122357
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+++|.|. .+|...+-... .++...+.-+.+||++|++|||+. +|.||||||.|.+++++...||+|||+
T Consensus 133 YV~TELmQ-SDLHKIIVSPQ------~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGL 202 (449)
T KOG0664|consen 133 YVLTELMQ-SDLHKIIVSPQ------ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGL 202 (449)
T ss_pred HHHHHHHH-hhhhheeccCC------CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEeccccc
Confidence 88999884 48888776644 467778888999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|+....+ ........+-|..|+|||++.+ ...|+.+.||||.|||+.|++..+.-|..
T Consensus 203 ARvee~d-------~~~hMTqEVVTQYYRAPEiLMG-----------aRhYs~AvDiWSVGCIFaELLgRrILFQA 260 (449)
T KOG0664|consen 203 ARTWDQR-------DRLNMTHEVVTQYYRAPELLMG-----------ARRYTGAVDIWSVGCIFAELLQRKILFQA 260 (449)
T ss_pred ccccchh-------hhhhhHHHHHHHHhccHHHhhc-----------chhhcCccceehhhHHHHHHHhhhhhhhc
Confidence 9865221 1222233456889999987764 35689999999999999999998888763
No 402
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=7.5e-28 Score=256.94 Aligned_cols=239 Identities=30% Similarity=0.379 Sum_probs=187.6
Q ss_pred CcceEEEEEECCCCcEEEEEEecccchhh-HHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHH
Q 001908 691 SFGSVYKGILGENGTFVAVKILNLMQKGA-LKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLE 769 (997)
Q Consensus 691 ~~g~V~~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~ 769 (997)
+||.||+|+...+++.+|+|++....... .+.+.+|++.+++++|+|++++++++.. ....++++||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~-----~~~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFED-----EDKLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheee-----CCEEEEEEeCCCCCCHH
Confidence 58999999998889999999997554433 6789999999999999999999998643 45899999999999999
Q ss_pred HHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcc
Q 001908 770 EWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM 849 (997)
Q Consensus 770 ~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~ 849 (997)
+++.... .+++..++.++.+++.++.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 76 ~~~~~~~------~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~----- 141 (244)
T smart00220 76 DLLKKRG------RLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG----- 141 (244)
T ss_pred HHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----
Confidence 9998654 278889999999999999999999 99999999999999999999999999998653211
Q ss_pred ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcc
Q 001908 850 ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALP 929 (997)
Q Consensus 850 ~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~ 929 (997)
......++..|+|||... +..++.++||||+|++++++++|..||..... ..........
T Consensus 142 ----~~~~~~~~~~~~~pE~~~------------~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~----~~~~~~~~~~ 201 (244)
T smart00220 142 ----LLTTFVGTPEYMAPEVLL------------GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQ----LLELFKKIGK 201 (244)
T ss_pred ----ccccccCCcCCCCHHHHc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHhc
Confidence 223456788999996553 46678899999999999999999999874311 1111111000
Q ss_pred hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 930 EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 930 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...... .....++.++.+++.+|+..+|++||++.++++
T Consensus 202 -~~~~~~--------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 202 -PKPPFP--------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred -cCCCCc--------------cccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence 000000 000003457889999999999999999999986
No 403
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=8.1e-28 Score=276.40 Aligned_cols=287 Identities=16% Similarity=0.200 Sum_probs=182.7
Q ss_pred HhhcCccCCcccccCcceEEEEEEC----------------CCCcEEEEEEecccchhhHHH--------------HHHH
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILG----------------ENGTFVAVKILNLMQKGALKS--------------FVAE 726 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~----------------~~~~~vAvK~~~~~~~~~~~~--------------~~~E 726 (997)
..++|++.++||+|+||+||+|... ..++.||||++........++ ...|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 4678999999999999999999752 345689999987543332233 3346
Q ss_pred HHHHhhcCCCCc-----ceEEeeeeccCc---CCCceEEEEEeeccCCCHHHHhhcCCCC------------------CC
Q 001908 727 CEVLRNTRHRNL-----IKIITVCSSIDF---KGADFKALVYEYMQNGSLEEWLHQSNGQ------------------PE 780 (997)
Q Consensus 727 ~~~l~~l~h~ni-----v~l~~~~~~~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------------~~ 780 (997)
+.++.+++|.++ +++++||..... ...+..++||||+++++|.++++...+. ..
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777654211 1235689999999999999999753210 01
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccc
Q 001908 781 VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860 (997)
Q Consensus 781 ~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~g 860 (997)
....++..++.++.|++.|+.|+|+. +|+||||||+||+++.++.+||+|||+++...... ........+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~-------~~~~~~g~~ 372 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGI-------NFNPLYGML 372 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCC-------ccCccccCC
Confidence 12356788899999999999999999 99999999999999999999999999997542111 111112235
Q ss_pred cccccCCcchhcccccCccc----------cCCCCCCCccchhHHHHHHHHHHHhCCC-CCCcCcCCCccHHHHHHhhcc
Q 001908 861 TVGYVPPGNIAKMLNLPCLE----------YGMGSEASVTGDVYSLGVMLLEMFTRRR-PTNCMFQGGLTLHEFCKMALP 929 (997)
Q Consensus 861 t~~y~aPE~l~~~~~~~~~e----------~~~~~~~~~~~DvwSlGvvl~elltg~~-P~~~~~~~~~~~~~~~~~~~~ 929 (997)
|+.|+|||.+......+... .........+.||||+||++++|+++.. ||.....-.....++...
T Consensus 373 tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~--- 449 (507)
T PLN03224 373 DPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDND--- 449 (507)
T ss_pred CcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccch---
Confidence 78999999876321100000 0000112235799999999999999875 654221100000000000
Q ss_pred hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCC---CCCCCHHHHHH
Q 001908 930 EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESP---IERMEMRDVLA 983 (997)
Q Consensus 930 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP---~~Rps~~evl~ 983 (997)
...+...... ...+ ...........+++.+|+..+| .+|+|++|+++
T Consensus 450 ~~~~r~~~~~-~~~~------~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 450 LNRWRMYKGQ-KYDF------SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred HHHHHhhccc-CCCc------ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 0000000000 0000 0111223456789999999766 68999999975
No 404
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=278.96 Aligned_cols=247 Identities=27% Similarity=0.378 Sum_probs=181.5
Q ss_pred CccCCcccccCcc-eEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFG-SVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g-~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|...+.+|.|+.| .||+|.. .|+.||||++-. +..+.+.+|++.++.- +|||||++++. -.+..+.|+
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~-----E~d~qF~YI 580 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCS-----EQDRQFLYI 580 (903)
T ss_pred eccHHHcccCCCCcEEEEEee--CCceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEee-----ccCCceEEE
Confidence 3445678999987 4899999 688999998753 2335678999999988 59999999876 456789999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---C--CcEEEcc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---D--MVAHVSD 833 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~--~~~kl~D 833 (997)
..|.| ..+|.++++.... +.........+.+..|+++|+++||+. +|||||+||.||||+. + .+++|+|
T Consensus 581 alELC-~~sL~dlie~~~~--d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSD 654 (903)
T KOG1027|consen 581 ALELC-ACSLQDLIESSGL--DVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISD 654 (903)
T ss_pred EehHh-hhhHHHHHhcccc--chhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecc
Confidence 99999 5599999998411 110111134567789999999999998 9999999999999976 3 4789999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-CCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg-~~P~~~ 912 (997)
||+++.+.....+ -.......||-+|+|||.+.. ..-+.++||||+|||+|+.++| ..||.+
T Consensus 655 fglsKkl~~~~sS-----~~r~s~~sGt~GW~APE~L~~------------~~~~~avDiFslGCvfyYvltgG~HpFGd 717 (903)
T KOG1027|consen 655 FGLSKKLAGGKSS-----FSRLSGGSGTSGWQAPEQLRE------------DRKTQAVDIFSLGCVFYYVLTGGSHPFGD 717 (903)
T ss_pred cccccccCCCcch-----hhcccCCCCcccccCHHHHhc------------cccCcccchhhcCceEEEEecCCccCCCc
Confidence 9999998543321 122455679999999988763 3445689999999999999995 899985
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
....+.++..- . ..+.. .. + ..+| +-.+||.+|++++|..||++.+|+
T Consensus 718 ~~~R~~NIl~~------~-------~~L~~-L~-----~-~~d~--eA~dLI~~ml~~dP~~RPsa~~VL 765 (903)
T KOG1027|consen 718 SLERQANILTG------N-------YTLVH-LE-----P-LPDC--EAKDLISRMLNPDPQLRPSATDVL 765 (903)
T ss_pred hHHhhhhhhcC------c-------cceee-ec-----c-CchH--HHHHHHHHhcCCCcccCCCHHHHh
Confidence 43322221110 0 00000 00 0 0111 446899999999999999999994
No 405
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.4e-27 Score=236.26 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=193.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.+.|.+.+.+|+|.||.+-+++++.+.+.+|+|.+.... ...++|.+|..---.+ .|.||+.-|++. |+..+..
T Consensus 23 ~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~-tt~~dF~rEfhY~~~Ls~H~hIi~tY~va----Fqt~d~Y 97 (378)
T KOG1345|consen 23 EDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ-TTQADFVREFHYSFFLSPHQHIIDTYEVA----FQTSDAY 97 (378)
T ss_pred hhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch-hhHHHHHHHhccceeeccchhhhHHHHHH----hhcCceE
Confidence 457999999999999999999999999999999886432 2347888888765555 599999988775 6777889
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC--CCCcEEEccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDMVAHVSDF 834 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~--~~~~~kl~DF 834 (997)
.+++||++.|+|.+-+...+ +-+....+++.|+++|++|+|++ .+||||||.+||||- +..++|++||
T Consensus 98 vF~qE~aP~gdL~snv~~~G-------igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDF 167 (378)
T KOG1345|consen 98 VFVQEFAPRGDLRSNVEAAG-------IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDF 167 (378)
T ss_pred EEeeccCccchhhhhcCccc-------ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeec
Confidence 99999999999999887754 66677889999999999999999 999999999999994 3358999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++.... ......-+..|.|||+.....+ ..-.+.+.+|||.||+++|.++||..||....
T Consensus 168 G~t~k~g~-----------tV~~~~~~~~y~~pe~~~~~~n-------e~~~~~ps~D~WqfGIi~f~cltG~~PWQka~ 229 (378)
T KOG1345|consen 168 GLTRKVGT-----------TVKYLEYVNNYHAPELCDTVVN-------EKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS 229 (378)
T ss_pred ccccccCc-----------eehhhhhhcccCCcHHHhhccc-------cceEecccccchheeeeeeeeecCCCcchhhh
Confidence 99875411 1112234567999998764322 12345778999999999999999999998544
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAA 988 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~ 988 (997)
..+..+.+|.....+.. +...+... + ..+...++.++-+.++|++|-...++.++-...
T Consensus 230 ~~d~~Y~~~~~w~~rk~-~~~P~~F~----------~----fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 230 IMDKPYWEWEQWLKRKN-PALPKKFN----------P----FSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCL 288 (378)
T ss_pred ccCchHHHHHHHhcccC-ccCchhhc----------c----cCHHHHHHHHHhcCCcccccchhHHHHHHHHHH
Confidence 44444555533332211 11111111 0 122344566688889999996666666655443
No 406
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.94 E-value=2.3e-28 Score=269.07 Aligned_cols=256 Identities=21% Similarity=0.331 Sum_probs=203.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|....++|.|+||.||||+++.+++..|+|+++..........+.|+-+++..+|+||+.+++-| -..+..++
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy-----lr~dklwi 89 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY-----LRRDKLWI 89 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh-----hhhcCcEE
Confidence 5788899999999999999999999999999999977777777888999999999999999999874 44668999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
.||||.+|+|.+..+-.. ++++.++..+.+..++|++|||++ +=+|||||-.||++++.|.+|++|||.+.
T Consensus 90 cMEycgggslQdiy~~Tg------plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 90 CMEYCGGGSLQDIYHVTG------PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred EEEecCCCcccceeeecc------cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchh
Confidence 999999999999887655 588889999999999999999999 88999999999999999999999999987
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.+. .+..+...+.||+.|||||+..- ...+.|...+|||+.|+...|+---++|..+...
T Consensus 161 qit--------ati~KrksfiGtpywmapEvaav---------erkggynqlcdiwa~gitAiel~eLqpplfdlhp--- 220 (829)
T KOG0576|consen 161 QIT--------ATIAKRKSFIGTPYWMAPEVAAV---------ERKGGYNQLCDIWALGITAIELGELQPPLFDLHP--- 220 (829)
T ss_pred hhh--------hhhhhhhcccCCccccchhHHHH---------HhcccccccccccccccchhhhhhcCCcccccch---
Confidence 652 23345566889999999998753 3457899999999999999999887777432110
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+....-+ ..+..+|-.. .......+.+-++++.|+..+|++||++.-+++
T Consensus 221 -mr~l~Lm-----TkS~~qpp~l---------kDk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 221 -MRALFLM-----TKSGFQPPTL---------KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred -HHHHHHh-----hccCCCCCcc---------cCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 0000000 0011111110 011123445778999999999999999877653
No 407
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-27 Score=257.64 Aligned_cols=199 Identities=24% Similarity=0.397 Sum_probs=168.3
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcC---CCCcceEEeee
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTR---HRNLIKIITVC 745 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---h~niv~l~~~~ 745 (997)
...+|+..+.+|+|+||.|+.|.++++...|+||.+.+.. +...-..-.||++|..++ |+||++++++
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdf- 637 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDF- 637 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhe-
Confidence 3457899999999999999999999999999999885321 111123456999999997 9999999999
Q ss_pred eccCcCCCceEEEEEeec-cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 746 SSIDFKGADFKALVYEYM-QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
|++.++.|++||-. ++.+|.++|.... .+++.....|++||+.|+++||++ +|||||||-+|+.++
T Consensus 638 ----FEddd~yyl~te~hg~gIDLFd~IE~kp------~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd 704 (772)
T KOG1152|consen 638 ----FEDDDYYYLETEVHGEGIDLFDFIEFKP------RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVD 704 (772)
T ss_pred ----eecCCeeEEEecCCCCCcchhhhhhccC------ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEe
Confidence 77888999999986 4569999999876 478889999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEM 903 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~el 903 (997)
.+|.+|++|||.|......+ ...++||..|.|||++.+ ..| +..-|||++|+++|.+
T Consensus 705 ~~g~~klidfgsaa~~ksgp----------fd~f~gtv~~aapevl~g------------~~y~gk~qdiwalgillyti 762 (772)
T KOG1152|consen 705 SNGFVKLIDFGSAAYTKSGP----------FDVFVGTVDYAAPEVLGG------------EKYLGKPQDIWALGILLYTI 762 (772)
T ss_pred cCCeEEEeeccchhhhcCCC----------cceeeeeccccchhhhCC------------CccCCCcchhhhhhheeeEE
Confidence 99999999999997663333 234689999999977763 344 4567999999999999
Q ss_pred HhCCCCCC
Q 001908 904 FTRRRPTN 911 (997)
Q Consensus 904 ltg~~P~~ 911 (997)
+...-||+
T Consensus 763 vykenpyy 770 (772)
T KOG1152|consen 763 VYKENPYY 770 (772)
T ss_pred EeccCCCc
Confidence 99999986
No 408
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=241.66 Aligned_cols=267 Identities=22% Similarity=0.254 Sum_probs=194.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~ 755 (997)
.+|.-.+.+|.|.- .|..|.+.-.+++||+|+... ......+...+|...+..++|+||++++.++.-... ..-..
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 46777788999998 888898888999999998742 223344678899999999999999999998643211 11245
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+|||+| .++|.+.+.. .++-.++..+..|+++|+.|||+. +|+|||+||+||++..++.+||.|||
T Consensus 96 ~y~v~e~m-~~nl~~vi~~--------elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVILM--------ELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHHhh-hhHHHHHHHH--------hcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 89999999 6699999883 367788999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.... ......+..|..|+|||++. +..+.+.+||||.||++.||++|+.-|.
T Consensus 164 ~ar~e~~---------~~~mtpyVvtRyyrapevil------------~~~~ke~vdiwSvGci~gEli~~~Vlf~---- 218 (369)
T KOG0665|consen 164 LARTEDT---------DFMMTPYVVTRYYRAPEVIL------------GMGYKENVDIWSVGCIMGELILGTVLFP---- 218 (369)
T ss_pred hhcccCc---------ccccCchhheeeccCchhee------------ccCCcccchhhhhhhHHHHHhhceEEec----
Confidence 9986421 12445578899999996654 4558999999999999999999999876
Q ss_pred CCccHHHHHHhh--c---chhhhhhcCcccccc---------------cccchhhh---hHHHHHHHHHHHHhhcCCCCC
Q 001908 916 GGLTLHEFCKMA--L---PEKVMETVDPSLLLA---------------WSDGRRRA---KVEECLVTVIRIGVACSMESP 972 (997)
Q Consensus 916 ~~~~~~~~~~~~--~---~~~~~~~~d~~~~~~---------------~~~~~~~~---~~~~~~~~l~~li~~cl~~dP 972 (997)
+...+.+|.... + ...+++...+..... +.+.-... ...-......+++.+|+..+|
T Consensus 219 g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~p 298 (369)
T KOG0665|consen 219 GKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDP 298 (369)
T ss_pred CchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccCh
Confidence 233444443321 0 011111111110000 00000000 000112245688999999999
Q ss_pred CCCCCHHHHHH
Q 001908 973 IERMEMRDVLA 983 (997)
Q Consensus 973 ~~Rps~~evl~ 983 (997)
++|.+++++++
T Consensus 299 e~Risv~daL~ 309 (369)
T KOG0665|consen 299 EKRISVDDALR 309 (369)
T ss_pred hhcccHHHHhc
Confidence 99999999975
No 409
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=8.3e-27 Score=246.38 Aligned_cols=282 Identities=26% Similarity=0.368 Sum_probs=205.5
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECC---CCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeec
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGE---NGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSS 747 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 747 (997)
++.+...+.|..+++||+|.|++||+|.... ..+.||+|.+..... ...+..|+++|..+ .+.||+++.++
T Consensus 29 q~~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~--- 103 (418)
T KOG1167|consen 29 QDIPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGC--- 103 (418)
T ss_pred hhhhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhh---
Confidence 3455666889999999999999999999876 778999999875433 35578999999998 59999999988
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD- 826 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~- 826 (997)
+...+.+++|+||++-.+..++... ++...+..+.+.+..||.++|.+ |||||||||+|++.+..
T Consensus 104 --~rnnd~v~ivlp~~~H~~f~~l~~~---------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t 169 (418)
T KOG1167|consen 104 --FRNNDQVAIVLPYFEHDRFRDLYRS---------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRT 169 (418)
T ss_pred --hccCCeeEEEecccCccCHHHHHhc---------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCcccccccccc
Confidence 7778899999999999899888875 66788999999999999999999 99999999999999854
Q ss_pred CcEEEcccccchhcccCC----------------------------------CCC--ccccccccccccccccccCCcch
Q 001908 827 MVAHVSDFGLARFLFARP----------------------------------FDT--SMETQSSSIGIKGTVGYVPPGNI 870 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~----------------------------------~~~--~~~~~~~~~~~~gt~~y~aPE~l 870 (997)
+.-.|.|||+|....... +.. ............||++|+|||++
T Consensus 170 ~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL 249 (418)
T KOG1167|consen 170 QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVL 249 (418)
T ss_pred CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHH
Confidence 688999999998321100 000 01112233446699999999988
Q ss_pred hcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhh----------cchh--hhhh---
Q 001908 871 AKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMA----------LPEK--VMET--- 935 (997)
Q Consensus 871 ~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~----------~~~~--~~~~--- 935 (997)
-+. +..+++.||||.|||+.-+++++.||-...++-..+.+.+-.. .+++ .++.
T Consensus 250 ~k~-----------~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~ 318 (418)
T KOG1167|consen 250 FRC-----------PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNI 318 (418)
T ss_pred hhc-----------cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccc
Confidence 753 4568899999999999999999999875444433333322111 1112 1110
Q ss_pred -cCcccccccccc-----h-------hh-hhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 936 -VDPSLLLAWSDG-----R-------RR-AKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 936 -~d~~~~~~~~~~-----~-------~~-~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.....+... + .. ...+..+...++++.+|+..||.+|.|++|+++
T Consensus 319 ~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 319 PTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 011111111111 0 01 111223347889999999999999999999975
No 410
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=6.6e-25 Score=228.46 Aligned_cols=212 Identities=31% Similarity=0.508 Sum_probs=177.9
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccC
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQN 765 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~ 765 (997)
||+|++|.||+++...+++.+++|++...... ..+.+.+|++.++.++|++++++++++. .....++++||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~-----~~~~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFE-----DENHLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeee-----cCCeEEEEEecCCC
Confidence 68999999999999877999999999755432 3567899999999999999999999854 34689999999998
Q ss_pred CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEcccccchhcccCC
Q 001908 766 GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLARFLFARP 844 (997)
Q Consensus 766 gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFg~a~~~~~~~ 844 (997)
++|.+++.... ..+++..++.++.+++++++|||+. +++|+||+|.||+++. ++.++++|||.+.......
T Consensus 76 ~~l~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 76 GSLKDLLKENE-----GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred CcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCc
Confidence 99999998752 1378899999999999999999999 9999999999999999 8999999999997652211
Q ss_pred CCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHH
Q 001908 845 FDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFC 924 (997)
Q Consensus 845 ~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~ 924 (997)
. ......+...|++||.... ...++.++|+|++|++++++
T Consensus 148 ~--------~~~~~~~~~~~~~pe~~~~-----------~~~~~~~~D~~~lg~~~~~l--------------------- 187 (215)
T cd00180 148 S--------LLKTIVGTPAYMAPEVLLG-----------KGYYSEKSDIWSLGVILYEL--------------------- 187 (215)
T ss_pred c--------hhhcccCCCCccChhHhcc-----------cCCCCchhhhHHHHHHHHHH---------------------
Confidence 0 1223457788999976642 12678899999999999999
Q ss_pred HhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 925 KMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 925 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.++.+++..|+..+|++||++.++++.
T Consensus 188 ---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 245689999999999999999999864
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.92 E-value=6.3e-26 Score=242.64 Aligned_cols=207 Identities=22% Similarity=0.298 Sum_probs=170.0
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC------CCCcceEEeee
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR------HRNLIKIITVC 745 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~ 745 (997)
.--+.....|.+....|+|-|++|.+|.+...|+.||||++..... ..+.=.+|+++|++++ .-|+++++..
T Consensus 425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~-M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~- 502 (752)
T KOG0670|consen 425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV-MHKTGLKELEILKKLNDADPEDKFHCLRLFRH- 502 (752)
T ss_pred ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH-HhhhhhHHHHHHHHhhccCchhhhHHHHHHHH-
Confidence 3345566789999999999999999999999999999999974322 2244478999999984 3477887766
Q ss_pred eccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC
Q 001908 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH 825 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~ 825 (997)
|....++|+|||-. .-+|.+.+++.+.. ..+....+..++.|+.-||..|-.. +|+|.||||.||||++
T Consensus 503 ----F~hknHLClVFE~L-slNLRevLKKyG~n---vGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE 571 (752)
T KOG0670|consen 503 ----FKHKNHLCLVFEPL-SLNLREVLKKYGRN---VGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNE 571 (752)
T ss_pred ----hhhcceeEEEehhh-hchHHHHHHHhCcc---cceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEecc
Confidence 56677999999988 44999999988743 3477889999999999999999998 9999999999999997
Q ss_pred CC-cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 826 DM-VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 826 ~~-~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.- ..||||||.|...... ..+.+.-+..|.|| |.+.|-.|+...|+||.||+|||+.
T Consensus 572 ~k~iLKLCDfGSA~~~~en----------eitPYLVSRFYRaP------------EIiLG~~yd~~iD~WSvgctLYElY 629 (752)
T KOG0670|consen 572 SKNILKLCDFGSASFASEN----------EITPYLVSRFYRAP------------EIILGLPYDYPIDTWSVGCTLYELY 629 (752)
T ss_pred CcceeeeccCccccccccc----------cccHHHHHHhccCc------------ceeecCcccCCccceeeceeeEEee
Confidence 65 6799999999765221 22334567789999 5556888999999999999999999
Q ss_pred hCCCCCCcC
Q 001908 905 TRRRPTNCM 913 (997)
Q Consensus 905 tg~~P~~~~ 913 (997)
||+.-|.+.
T Consensus 630 tGkIlFpG~ 638 (752)
T KOG0670|consen 630 TGKILFPGR 638 (752)
T ss_pred ccceecCCC
Confidence 999988754
No 412
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-27 Score=247.48 Aligned_cols=411 Identities=19% Similarity=0.195 Sum_probs=239.9
Q ss_pred EccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCcccc
Q 001908 128 MLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFS 207 (997)
Q Consensus 128 ~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~ 207 (997)
|=++-.|+ +||.++..= -.++++..|+++ .||+..|..+.+|+.||||+|+|+-+-|..|
T Consensus 52 dCr~~GL~-eVP~~LP~~--tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF---------------- 111 (498)
T KOG4237|consen 52 DCRGKGLT-EVPANLPPE--TVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAF---------------- 111 (498)
T ss_pred EccCCCcc-cCcccCCCc--ceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhh----------------
Confidence 33444444 666655432 123344444444 5555555555555555555555554445444
Q ss_pred ccCCCcccCCCccceeeccC-CCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCccccc
Q 001908 208 GTVPPSLYNMSSLENILLDV-NGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSII 286 (997)
Q Consensus 208 g~ip~~l~~l~~L~~L~L~~-N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~ 286 (997)
..+.+|.+|-+-+ |+|+ .+|...|.+|..|+.|.+.-|++.-...+.|..+.+|..|.|.+|.+..+....
T Consensus 112 -------~GL~~l~~Lvlyg~NkI~-~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~t 183 (498)
T KOG4237|consen 112 -------KGLASLLSLVLYGNNKIT-DLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGT 183 (498)
T ss_pred -------hhhHhhhHHHhhcCCchh-hhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhcccc
Confidence 4444444333322 4444 445444444555555555555554444444555555555555555554444444
Q ss_pred ccccCccCeeEccCccCCCCCC------CCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCccccc
Q 001908 287 FGRLKNLWSLDLGINNLGSGGA------NDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISG 360 (997)
Q Consensus 287 ~~~l~~L~~L~Ls~N~l~~~~~------~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~ 360 (997)
|..+..++.+.+..|.+-.... ..-..+..++......-..+.++++..+-+..|......+..-..+....-+
T Consensus 184 f~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~ 263 (498)
T KOG4237|consen 184 FQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDS 263 (498)
T ss_pred ccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCC
Confidence 5555555555555444211000 0000011223333334444555555544444444332222222223333333
Q ss_pred ccC-CCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCC
Q 001908 361 TIP-SGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLG 439 (997)
Q Consensus 361 ~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 439 (997)
+-| ..|..|++|+.|+|++|+|+++-+.+|.++..+++|.|..|+|...-...|.++..|+.|+|.+|+|+..-|.+|.
T Consensus 264 ~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~ 343 (498)
T KOG4237|consen 264 ICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQ 343 (498)
T ss_pred cChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccc
Confidence 444 4689999999999999999999999999999999999999999977778899999999999999999999999999
Q ss_pred CCCCCcEEecCCCcccCC-----cccc----------cccccccccccccCCCcccC---CCcccccc---------ccc
Q 001908 440 NCKNLVSLNLSDNKLIGA-----VPQQ----------ILTITTLSRFLDLGNNHLNG---SLPLEVGN---------LKN 492 (997)
Q Consensus 440 ~l~~L~~L~L~~N~l~~~-----~p~~----------~~~l~~ll~~L~Ls~N~l~~---~~p~~~~~---------l~~ 492 (997)
.+..|.+|+|-.|.+.-. +-+| -+.-+..++.++++.+.+.. ..|++.+. .+-
T Consensus 344 ~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c 423 (498)
T KOG4237|consen 344 TLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTC 423 (498)
T ss_pred ccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcch
Confidence 999999999999876310 0000 01112222455555554431 12322221 112
Q ss_pred c-ceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCC
Q 001908 493 L-VALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLS 571 (997)
Q Consensus 493 L-~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 571 (997)
+ ++..-|++.++ .+|..+. ..-.+|++.+|.++ .+|.+ .+.+| .+|||+|+++..-...|.++++|.+|-||
T Consensus 424 ~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlils 496 (498)
T KOG4237|consen 424 LDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILS 496 (498)
T ss_pred hhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEe
Confidence 2 23345555554 5554443 24467888899988 67776 66777 88999999887777788888999888888
Q ss_pred CC
Q 001908 572 YN 573 (997)
Q Consensus 572 ~N 573 (997)
+|
T Consensus 497 yn 498 (498)
T KOG4237|consen 497 YN 498 (498)
T ss_pred cC
Confidence 87
No 413
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=2.4e-24 Score=227.19 Aligned_cols=201 Identities=33% Similarity=0.517 Sum_probs=169.5
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
|+..+.||+|++|.||+|....+++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++. .....+++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~-----~~~~~~~v 75 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFE-----DPEPLYLV 75 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeee-----cCCceEEE
Confidence 56778999999999999999877899999999765444 5678899999999999999999999854 34578999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+||+++++|.+++..... .+++..+..++.+++.++.|||+. +++|+|++|+||+++.++.++++|||.+..
T Consensus 76 ~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~ 147 (225)
T smart00221 76 MEYCEGGDLFDYLRKKGG-----KLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARF 147 (225)
T ss_pred EeccCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeE
Confidence 999999999999987542 167889999999999999999999 999999999999999999999999999987
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
..... ........++..|++||... ....++.++|||+||++++||++|+.||..
T Consensus 148 ~~~~~-------~~~~~~~~~~~~~~~pe~~~-----------~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 148 IHRDL-------AALLKTVKGTPFYLAPEVLL-----------GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ecCcc-------cccccceeccCCcCCHhHhc-----------CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 63221 00223346778899997652 245677799999999999999999999964
No 414
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=4.6e-24 Score=253.16 Aligned_cols=261 Identities=24% Similarity=0.334 Sum_probs=123.5
Q ss_pred cceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEcc
Q 001908 220 LENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLG 299 (997)
Q Consensus 220 L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 299 (997)
-..|+|+.|.|+ .+|..+. ++|+.|++++|+|+ .+|.. +++|++|+|++|+|+..+ .. .++|++|+|+
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt-~LP~l---p~~Lk~LdLs~N~LtsLP-~l---p~sL~~L~Ls 270 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPAL---PPELRTLEVSGNQLTSLP-VL---PPGLLELSIF 270 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCC-CCCCC---CCCCcEEEecCCccCccc-Cc---ccccceeecc
Confidence 456677777776 6776554 35666666666666 34432 345556666666555432 11 2344444444
Q ss_pred CccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccC
Q 001908 300 INNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEF 379 (997)
Q Consensus 300 ~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~ 379 (997)
+|.|+.+ |.. ...|+.|++++|+|+ .+|.. .++|+.|+|++
T Consensus 271 ~N~L~~L-------------------------------p~l----p~~L~~L~Ls~N~Lt-~LP~~---p~~L~~LdLS~ 311 (788)
T PRK15387 271 SNPLTHL-------------------------------PAL----PSGLCKLWIFGNQLT-SLPVL---PPGLQELSVSD 311 (788)
T ss_pred CCchhhh-------------------------------hhc----hhhcCEEECcCCccc-ccccc---ccccceeECCC
Confidence 4444332 111 122333333333333 12221 23455555555
Q ss_pred CCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcc
Q 001908 380 NQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVP 459 (997)
Q Consensus 380 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 459 (997)
|+|++ +|... .+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|... .+|+.|++++|+++ .+|
T Consensus 312 N~L~~-Lp~lp---~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~-~LP 378 (788)
T PRK15387 312 NQLAS-LPALP---SELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLT-SLP 378 (788)
T ss_pred Ccccc-CCCCc---ccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCCC---cccceehhhccccc-cCc
Confidence 55553 23211 234455555555542 3321 1245555555555552 33221 23444444444444 233
Q ss_pred cccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccC
Q 001908 460 QQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLK 539 (997)
Q Consensus 460 ~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 539 (997)
. . ..+|+.|++++|+|+ .+|... ++|+.|++++|+|+ .+|... .
T Consensus 379 ~-------------------------l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS~N~Ls-sIP~l~---~ 422 (788)
T PRK15387 379 A-------------------------L---PSGLKELIVSGNRLT-SLPVLP---SELKELMVSGNRLT-SLPMLP---S 422 (788)
T ss_pred c-------------------------c---ccccceEEecCCccc-CCCCcc---cCCCEEEccCCcCC-CCCcch---h
Confidence 2 1 123455555555554 233221 34555555555555 244322 2
Q ss_pred cCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCC
Q 001908 540 SIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 540 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
+|+.|+|++|+|+ .+|..+.++++|+.|+|++|+|+|.+|.
T Consensus 423 ~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~ 463 (788)
T PRK15387 423 GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 463 (788)
T ss_pred hhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHH
Confidence 4455666666665 4555566666666666666666655443
No 415
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=7e-24 Score=251.62 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=160.4
Q ss_pred hhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCcc
Q 001908 199 LHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINY 278 (997)
Q Consensus 199 L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 278 (997)
|++++|.|+ .+|+.+. ++|+.|++++|+++ .+|. ..++|++|+|++|+|+ .+|.. ..+|+.|+|++|.
T Consensus 206 LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~----lp~~Lk~LdLs~N~Lt-sLP~l---p~sL~~L~Ls~N~ 273 (788)
T PRK15387 206 LNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA----LPPELRTLEVSGNQLT-SLPVL---PPGLLELSIFSNP 273 (788)
T ss_pred EEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCC----CCCCCcEEEecCCccC-cccCc---ccccceeeccCCc
Confidence 555666665 5666665 36788888888887 5764 2577888888888888 45643 3578888888888
Q ss_pred CCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCccc
Q 001908 279 FTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQI 358 (997)
Q Consensus 279 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l 358 (997)
|+..+. . .++|+.|+|++|+|+.++. ..++|++|+|++|++++ +|.. ...|+.|++++|+|
T Consensus 274 L~~Lp~-l---p~~L~~L~Ls~N~Lt~LP~----------~p~~L~~LdLS~N~L~~-Lp~l----p~~L~~L~Ls~N~L 334 (788)
T PRK15387 274 LTHLPA-L---PSGLCKLWIFGNQLTSLPV----------LPPGLQELSVSDNQLAS-LPAL----PSELCKLWAYNNQL 334 (788)
T ss_pred hhhhhh-c---hhhcCEEECcCCccccccc----------cccccceeECCCCcccc-CCCC----cccccccccccCcc
Confidence 875432 2 2567788888888876543 23568888888888774 3331 23455566666666
Q ss_pred ccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCC
Q 001908 359 SGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSL 438 (997)
Q Consensus 359 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 438 (997)
++ +|.. ..+|+.|+|++|+|++ +|.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|+
T Consensus 335 ~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt------- 395 (788)
T PRK15387 335 TS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT------- 395 (788)
T ss_pred cc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehhhcccccc-Cccc---ccccceEEecCCccc-------
Confidence 53 3321 1345555666665553 3322 1344455555555552 3332 133444555555444
Q ss_pred CCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCcc
Q 001908 439 GNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLE 518 (997)
Q Consensus 439 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 518 (997)
.+|... .++ +.|++++|+|+ .+|.. ..+|+.|++++|+|+ .+|..+.++++|+
T Consensus 396 ------------------~LP~l~---s~L-~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~ 448 (788)
T PRK15387 396 ------------------SLPVLP---SEL-KELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSET 448 (788)
T ss_pred ------------------CCCCcc---cCC-CEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCC
Confidence 233221 223 55566666655 34432 235677888888887 6788888888888
Q ss_pred EEEccCccccccCChhcccc
Q 001908 519 IFHMQGNSFRGSIPLSLRSL 538 (997)
Q Consensus 519 ~L~Ls~N~l~~~~p~~~~~l 538 (997)
.|+|++|+|++.+|..+..+
T Consensus 449 ~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 449 TVNLEGNPLSERTLQALREI 468 (788)
T ss_pred eEECCCCCCCchHHHHHHHH
Confidence 88888888887777766443
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.9e-23 Score=265.05 Aligned_cols=335 Identities=19% Similarity=0.210 Sum_probs=172.0
Q ss_pred cccCCCccEEEecCCc------CcCCCCCCCCCCC-CCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCc
Q 001908 239 GVTLPNLQVFAIGDNY------FSGSIPESFSNAS-NIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDL 311 (997)
Q Consensus 239 ~~~l~~L~~L~L~~N~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 311 (997)
|.++++|+.|.+.++. +...+|+.|..++ +|+.|++.+|.++.. |..| ...+|+.|+|++|++..++.
T Consensus 554 F~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~l-P~~f-~~~~L~~L~L~~s~l~~L~~--- 628 (1153)
T PLN03210 554 FKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCM-PSNF-RPENLVKLQMQGSKLEKLWD--- 628 (1153)
T ss_pred HhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCC-CCcC-CccCCcEEECcCcccccccc---
Confidence 3345555555554332 2233444444443 355555555555433 2233 34555555555555554322
Q ss_pred chhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcc
Q 001908 312 DFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIG 391 (997)
Q Consensus 312 ~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 391 (997)
.+..+++|++|+|++|...+.+|. +..+ ++|+.|++++|..-..+|..++++++|+.|++++|..-+.+|..+
T Consensus 629 ----~~~~l~~Lk~L~Ls~~~~l~~ip~-ls~l-~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i- 701 (1153)
T PLN03210 629 ----GVHSLTGLRNIDLRGSKNLKEIPD-LSMA-TNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI- 701 (1153)
T ss_pred ----ccccCCCCCEEECCCCCCcCcCCc-cccC-CcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-
Confidence 234455555555555543334443 3333 455556665555444556666666666666666654333455444
Q ss_pred cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCccc-------CCccccccc
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI-------GAVPQQILT 464 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-------~~~p~~~~~ 464 (997)
++++|+.|+|++|...+.+|.. .++|+.|+|++|.+. .+|..+ .+++|+.|++.++... ...|.....
T Consensus 702 ~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~ 776 (1153)
T PLN03210 702 NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTML 776 (1153)
T ss_pred CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchhhhhc
Confidence 4566666666665444444432 345566666666665 345443 3555666655553211 011111111
Q ss_pred ccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCee
Q 001908 465 ITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKEL 544 (997)
Q Consensus 465 l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 544 (997)
.++| +.|+|++|...+.+|..++++++|+.|++++|...+.+|..+ ++++|+.|+|++|.....+|.. ..+|+.|
T Consensus 777 ~~sL-~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L 851 (1153)
T PLN03210 777 SPSL-TRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDL 851 (1153)
T ss_pred cccc-hheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEe
Confidence 2333 566666665555666666666666666666654333555544 5666666666665443344432 2456666
Q ss_pred eCccccccccCchhccCCCCCCEEeCCC-CcCcccCCCCCcCCCCcceeecCC
Q 001908 545 DLSCNNLSGQIPEFLENLSFLEYLNLSY-NHFDGEVPTKGVFSNKTRVQLTGN 596 (997)
Q Consensus 545 ~Ls~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~~~~~~~~~~~N 596 (997)
+|++|.++ .+|..+..+++|+.|+|++ |+|.+..+....+..+..+.+.++
T Consensus 852 ~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C 903 (1153)
T PLN03210 852 NLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDC 903 (1153)
T ss_pred ECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCC
Confidence 66666665 4566666666666666665 445543333344555555555543
No 417
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.90 E-value=3.7e-23 Score=265.22 Aligned_cols=339 Identities=21% Similarity=0.260 Sum_probs=265.7
Q ss_pred CCcccCCCccceeeccCCC------CCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCccc
Q 001908 211 PPSLYNMSSLENILLDVNG------FTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVS 284 (997)
Q Consensus 211 p~~l~~l~~L~~L~L~~N~------l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 284 (997)
+..|.+|.+|+.|.+..+. +...+|..+..-.++|+.|++.+|.++ .+|..| ...+|+.|+|++|++.. ++
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-LW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-cc
Confidence 3457788899998886653 334567666533456999999998886 778777 57889999999999875 45
Q ss_pred ccccccCccCeeEccCcc-CCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccC
Q 001908 285 IIFGRLKNLWSLDLGINN-LGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP 363 (997)
Q Consensus 285 ~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p 363 (997)
..+..+++|+.|+|++++ +..++ .+..+++|++|+|++|.....+|..+.++ ++|+.|++++|..-+.+|
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip--------~ls~l~~Le~L~L~~c~~L~~lp~si~~L-~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP--------DLSMATNLETLKLSDCSSLVELPSSIQYL-NKLEDLDMSRCENLEILP 698 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC--------ccccCCcccEEEecCCCCccccchhhhcc-CCCCEEeCCCCCCcCccC
Confidence 567889999999998764 44332 36678899999999988777889888887 689999999876555777
Q ss_pred CCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcC-------CCCCCC
Q 001908 364 SGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHL-------QGNIPP 436 (997)
Q Consensus 364 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-------~~~~p~ 436 (997)
..+ ++++|+.|++++|...+.+|.. .++|++|+|++|.++ .+|..+ .+++|+.|++.++.. ....+.
T Consensus 699 ~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~ 772 (1153)
T PLN03210 699 TGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTPL 772 (1153)
T ss_pred CcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccchh
Confidence 766 7899999999998776666653 467899999999987 677665 578888888887432 222222
Q ss_pred CCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcC
Q 001908 437 SLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTG 516 (997)
Q Consensus 437 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 516 (997)
.+...++|+.|+|++|...+.+|..+.++++| +.|++++|..-+.+|..+ ++++|+.|++++|.....+|.. ..+
T Consensus 773 ~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L-~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 773 MTMLSPSLTRLFLSDIPSLVELPSSIQNLHKL-EHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhccccchheeCCCCCCccccChhhhCCCCC-CEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 33345789999999998888899999999998 899999986555788766 7899999999997655566653 367
Q ss_pred ccEEEccCccccccCChhccccCcCCeeeCcc-ccccccCchhccCCCCCCEEeCCCCc
Q 001908 517 LEIFHMQGNSFRGSIPLSLRSLKSIKELDLSC-NNLSGQIPEFLENLSFLEYLNLSYNH 574 (997)
Q Consensus 517 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ls~N~ 574 (997)
|+.|+|++|.++ .+|.++..+++|+.|+|++ |++. .+|..+..+++|+.++++++.
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 899999999998 7899999999999999998 5665 578888899999999999884
No 418
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=2.2e-25 Score=231.96 Aligned_cols=406 Identities=18% Similarity=0.215 Sum_probs=224.8
Q ss_pred ccccccCCCCCccCCCCCCCeEEEccCCCccccCCc-cccCCCcccchhcccccccccccccccccccccceeec-cccc
Q 001908 105 LATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPT-NLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISL-ARNH 182 (997)
Q Consensus 105 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~-~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L-~~N~ 182 (997)
=++-.++ ++|..+- ..-+.++|..|+++ .||+ .|+.+.+|+.||+++|++. .|-++.|..+.+|..|-+ ++|+
T Consensus 53 Cr~~GL~-eVP~~LP--~~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 53 CRGKGLT-EVPANLP--PETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred ccCCCcc-cCcccCC--CcceEEEeccCCcc-cCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCc
Confidence 3444444 6776654 35678999999999 6665 6888999999999999998 666666667777766544 4477
Q ss_pred ccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCC
Q 001908 183 LTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPE 261 (997)
Q Consensus 183 l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~ 261 (997)
|+..--..|+.|+ ++.|.+.-|++.-.....|..+.+|..|.|..|.+. .|+...+..+.+++.+.+..|.+-.
T Consensus 128 I~~l~k~~F~gL~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q-~i~~~tf~~l~~i~tlhlA~np~ic---- 202 (498)
T KOG4237|consen 128 ITDLPKGAFGGLSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ-SICKGTFQGLAAIKTLHLAQNPFIC---- 202 (498)
T ss_pred hhhhhhhHhhhHHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhh-hhccccccchhccchHhhhcCcccc----
Confidence 7743334555553 334555666665444455555555555555555555 4555444455555555555554110
Q ss_pred CCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcc--------------------hhhhhccCC
Q 001908 262 SFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLD--------------------FVTILTNCS 321 (997)
Q Consensus 262 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--------------------~~~~l~~l~ 321 (997)
..+++.+.. +....|..+++..-.....+.++++..+.+..+. ....|..++
T Consensus 203 -dCnL~wla~-------~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~ 274 (498)
T KOG4237|consen 203 -DCNLPWLAD-------DLAMNPIETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLP 274 (498)
T ss_pred -ccccchhhh-------HHhhchhhcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcc
Confidence 000000000 1112233444444444444444444443332111 112355555
Q ss_pred CCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecc
Q 001908 322 KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGL 401 (997)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 401 (997)
+|+.|+|++|+|+++-+.+|... ..+++|+|..|+|...-...|.++..|+.|+|.+|+|+...|.+|..+..|.+|.|
T Consensus 275 ~L~~lnlsnN~i~~i~~~aFe~~-a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l 353 (498)
T KOG4237|consen 275 NLRKLNLSNNKITRIEDGAFEGA-AELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNL 353 (498)
T ss_pred cceEeccCCCccchhhhhhhcch-hhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeeh
Confidence 55555555555555555555554 34555555555555444455555555555555555555555555555555555555
Q ss_pred cccccccc-----chhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC---Ccccccc---------c
Q 001908 402 SSNFLQGN-----IPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG---AVPQQIL---------T 464 (997)
Q Consensus 402 s~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~---~~p~~~~---------~ 464 (997)
-.|.+.-. +-+|+. .+.-.|..| . ..-..++.+.++++.+.. ..|+..+ .
T Consensus 354 ~~Np~~CnC~l~wl~~Wlr-----------~~~~~~~~~-C-q~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~ 420 (498)
T KOG4237|consen 354 LSNPFNCNCRLAWLGEWLR-----------KKSVVGNPR-C-QSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPP 420 (498)
T ss_pred ccCcccCccchHHHHHHHh-----------hCCCCCCCC-C-CCCchhccccchhccccccccCCccccCCCCCCCCCCC
Confidence 55544210 111111 111111111 0 111234455555554321 1111111 1
Q ss_pred ccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCee
Q 001908 465 ITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKEL 544 (997)
Q Consensus 465 l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 544 (997)
.+-+-+...-|++.++ .+|..+. ..-++|++.+|.++ .+|.. .+.+| .+++++|+++..-...|.++.+|.+|
T Consensus 421 c~c~~tVvRcSnk~lk-~lp~~iP--~d~telyl~gn~~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tl 493 (498)
T KOG4237|consen 421 CTCLDTVVRCSNKLLK-LLPRGIP--VDVTELYLDGNAIT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTL 493 (498)
T ss_pred cchhhhhHhhcccchh-hcCCCCC--chhHHHhcccchhc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhhee
Confidence 1222244556666665 5555432 35678999999998 78877 66778 89999999986667789999999999
Q ss_pred eCccc
Q 001908 545 DLSCN 549 (997)
Q Consensus 545 ~Ls~N 549 (997)
-||+|
T Consensus 494 ilsyn 498 (498)
T KOG4237|consen 494 ILSYN 498 (498)
T ss_pred EEecC
Confidence 99876
No 419
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=4.9e-23 Score=246.48 Aligned_cols=377 Identities=20% Similarity=0.274 Sum_probs=197.1
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCC----CCCCCCCCeeee----------------eeecCCCCcEEEEeccCCCC
Q 001908 27 SAHTNETDRLALLAIKSQLHDPLGVTNS----WNNSINLCQWAG----------------VTCGHRHQRVTELDLRHQNI 86 (997)
Q Consensus 27 ~~~~~~~~~~aLl~~k~~~~~~~~~~~s----W~~~~~~c~w~g----------------v~C~~~~~~v~~L~L~~~~l 86 (997)
++...++|.+.+++..+.+.-|. .+.+ |++.+++|-=.. |.|.. +.||.+..-+...
T Consensus 57 ~~~~~~~~~~~~~~~~~~l~~p~-~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~ 133 (754)
T PRK15370 57 PETASPEEIKSKFECLRMLAFPA-YADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQ 133 (754)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCc-hhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--Ccccccccccccc
Confidence 44457899999999999987763 4555 999999995443 67753 4577766554221
Q ss_pred CCcccccccCccccccccc----cccccCCCCC---cc-----CCCCCCCeEEEccCCCccccCCccccCCCcccchhcc
Q 001908 87 GGSLSPYVGNLSFLRYINL----ATNNFHGEIP---KE-----IGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAY 154 (997)
Q Consensus 87 ~g~~~~~l~~l~~L~~L~L----s~N~l~g~~p---~~-----~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~ 154 (997)
.....+ .-..-.+... ..+.-.+.-+ .. -+-..+...|+|+++.++ .+|..+. .+|+.|+++
T Consensus 134 ~~~~~~---~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls 207 (754)
T PRK15370 134 ASSASG---SKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLT-TIPACIP--EQITTLILD 207 (754)
T ss_pred cccCCC---CCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcC-cCCcccc--cCCcEEEec
Confidence 111100 0000000000 0000000000 00 011123444555555444 3444433 234444444
Q ss_pred cccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCC
Q 001908 155 RNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNL 234 (997)
Q Consensus 155 ~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~l 234 (997)
+|++. .+|..++ .+|++|++++|+|+ .+|..+.. ++..|+|++|++. .+|..+. ++|+.|+|++|+++ .+
T Consensus 208 ~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lt-sLP~~l~~-~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls~N~L~-~L 277 (754)
T PRK15370 208 NNELK-SLPENLQ---GNIKTLYANSNQLT-SIPATLPD-TIQEMELSINRIT-ELPERLP--SALQSLDLFHNKIS-CL 277 (754)
T ss_pred CCCCC-cCChhhc---cCCCEEECCCCccc-cCChhhhc-cccEEECcCCccC-cCChhHh--CCCCEEECcCCccC-cc
Confidence 44444 3444432 24555555555555 33443321 2344555555555 4555543 35666666666666 46
Q ss_pred CccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchh
Q 001908 235 PLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFV 314 (997)
Q Consensus 235 p~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 314 (997)
|..++ ++|+.|++++|+|++ +|..+. ++|+.|++++|+++..++.. .++|++|++++|.++.++.
T Consensus 278 P~~l~---~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~LP~~l---~~sL~~L~Ls~N~Lt~LP~------ 342 (754)
T PRK15370 278 PENLP---EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTALPETL---PPGLKTLEAGENALTSLPA------ 342 (754)
T ss_pred ccccC---CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccCCccc---cccceeccccCCccccCCh------
Confidence 65543 356666666666663 444332 35666777777766543222 1466667777777665432
Q ss_pred hhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCc----
Q 001908 315 TILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREI---- 390 (997)
Q Consensus 315 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---- 390 (997)
.+ .++|+.|++++|+++ .+|..+. +.|+.|++++|+|+ .+|..+. .+|+.|++++|+|+ .+|..+
T Consensus 343 -~l--~~sL~~L~Ls~N~L~-~LP~~lp---~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~ 411 (754)
T PRK15370 343 -SL--PPELQVLDVSKNQIT-VLPETLP---PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFR 411 (754)
T ss_pred -hh--cCcccEEECCCCCCC-cCChhhc---CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHh
Confidence 11 246777777777776 3554432 45777777777776 3454443 35777778888777 444433
Q ss_pred ccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCC-CCCCCCCCCCCCcEEecCCCccc
Q 001908 391 GQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG-NIPPSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~ 455 (997)
..++++..|+|.+|.++. ..+.+|+.| ++.+.+.| .++...+.+.+++....-.+.+.
T Consensus 412 ~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~~~~l~~a~~ 470 (754)
T PRK15370 412 GEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRVTRPLHQAVQ 470 (754)
T ss_pred hcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccCCcccccccccccccccchHHHHHh
Confidence 344677888888888872 233344444 34455443 33444444455554433334333
No 420
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.89 E-value=1.1e-22 Score=224.21 Aligned_cols=175 Identities=20% Similarity=0.181 Sum_probs=132.5
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECC-CCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGE-NGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
.....+|+..+.||+|+||+||+|+++. +++.||||++... .....+.+.+|++++++++|+|+++.+..
T Consensus 14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~---- 89 (365)
T PRK09188 14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA---- 89 (365)
T ss_pred ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----
Confidence 3455789999999999999999999875 6788899987532 22345678999999999999999853322
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC-CCCCeeeCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL-KPSNVLLDHDM 827 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl-k~~NIll~~~~ 827 (997)
. +..++||||++|++|.. .... . ...++.|+++|++|||++ +|+|||| ||+||+++.++
T Consensus 90 -~---~~~~LVmE~~~G~~L~~-~~~~---------~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~ 149 (365)
T PRK09188 90 -T---GKDGLVRGWTEGVPLHL-ARPH---------G---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDG 149 (365)
T ss_pred -c---CCcEEEEEccCCCCHHH-hCcc---------c---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCC
Confidence 1 24799999999999963 2111 1 145788999999999999 9999999 99999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcc
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKM 873 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~ 873 (997)
.+||+|||+|+................-....+++.|+|||.+...
T Consensus 150 ~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 150 EAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred CEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9999999999976432211111111122356788899999988753
No 421
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.88 E-value=2.7e-22 Score=203.12 Aligned_cols=170 Identities=22% Similarity=0.226 Sum_probs=125.0
Q ss_pred CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCC
Q 001908 766 GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPF 845 (997)
Q Consensus 766 gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~ 845 (997)
|+|.++++.... .+++.+++.++.||++||+|||++ + ||+||+++.++.+|+ ||.++....
T Consensus 1 GsL~~~l~~~~~-----~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~--- 61 (176)
T smart00750 1 VSLADILEVRGR-----PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTP--- 61 (176)
T ss_pred CcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecc---
Confidence 689999986431 489999999999999999999998 5 999999999999999 999876421
Q ss_pred CCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHH
Q 001908 846 DTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCK 925 (997)
Q Consensus 846 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~ 925 (997)
....||+.|||||++. +..++.++|||||||++|||+||+.||.........+.....
T Consensus 62 ----------~~~~g~~~y~aPE~~~------------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~ 119 (176)
T smart00750 62 ----------EQSRVDPYFMAPEVIQ------------GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLN 119 (176)
T ss_pred ----------ccCCCcccccChHHhc------------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHH
Confidence 1125889999996654 567889999999999999999999998643221111111111
Q ss_pred hhcchhhhhhcCcccccccccchhhhhHHHHH--HHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 926 MALPEKVMETVDPSLLLAWSDGRRRAKVEECL--VTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 926 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~--~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
... ..++.. ........ .++.+++..||..+|++||++.|+++.+..+..+
T Consensus 120 ~~~------~~~~~~---------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 120 GMP------ADDPRD---------RSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred Hhc------cCCccc---------cccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 100 000000 01111222 2688999999999999999999999998877653
No 422
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.88 E-value=3.3e-23 Score=258.22 Aligned_cols=207 Identities=16% Similarity=0.204 Sum_probs=135.6
Q ss_pred hcCC-CCcceEEeeeeccCc--CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 001908 732 NTRH-RNLIKIITVCSSIDF--KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQ 808 (997)
Q Consensus 732 ~l~h-~niv~l~~~~~~~~~--~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~ 808 (997)
.++| +||+++++++..... ...+..+.++||+ +++|.+++.... ..+++.+++.++.||++||+|||++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~-- 99 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD-----RSVDAFECFHVFRQIVEIVNAAHSQ-- 99 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc-----ccccHHHHHHHHHHHHHHHHHHHhC--
Confidence 3445 577777776522211 1224577888988 669999997532 2488999999999999999999999
Q ss_pred CCcEecCCCCCCeeeCCC-------------------CcEEEcccccchhcccCCC---CC---c--ccccccccccccc
Q 001908 809 PPIVHGDLKPSNVLLDHD-------------------MVAHVSDFGLARFLFARPF---DT---S--METQSSSIGIKGT 861 (997)
Q Consensus 809 ~~ivHrDlk~~NIll~~~-------------------~~~kl~DFg~a~~~~~~~~---~~---~--~~~~~~~~~~~gt 861 (997)
+|+||||||+|||++.. +.+|++|||+++....... .. . ...........||
T Consensus 100 -gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 178 (793)
T PLN00181 100 -GIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEM 178 (793)
T ss_pred -CeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCC
Confidence 99999999999999654 4455666666543211000 00 0 0000111224689
Q ss_pred ccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccc
Q 001908 862 VGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLL 941 (997)
Q Consensus 862 ~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 941 (997)
+.|||||++ .+..++.++|||||||++|||++|.+|+... ...+..... ....+..
T Consensus 179 ~~Y~APE~~------------~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~---~~~~~~~~~--------~~~~~~~- 234 (793)
T PLN00181 179 SWYTSPEED------------NGSSSNCASDVYRLGVLLFELFCPVSSREEK---SRTMSSLRH--------RVLPPQI- 234 (793)
T ss_pred cceEChhhh------------ccCCCCchhhhhhHHHHHHHHhhCCCchhhH---HHHHHHHHH--------hhcChhh-
Confidence 999999654 4577899999999999999999998886421 001111100 0011110
Q ss_pred cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 942 LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 942 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........+++.+||+.+|.+||++.|+++
T Consensus 235 ------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 235 ------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred ------------hhcCHHHHHHHHHhCCCChhhCcChHHHhh
Confidence 011233457888999999999999999975
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.8e-23 Score=205.49 Aligned_cols=250 Identities=21% Similarity=0.302 Sum_probs=186.0
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEec--ccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
...+|.+...|+.|+|+|. |..+++|++. .......++|..|.-.++.+.||||..+++.|.. +.+..++.
T Consensus 194 l~tkl~e~hsgelwrgrwq--gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacns-----ppnlv~is 266 (448)
T KOG0195|consen 194 LITKLAESHSGELWRGRWQ--GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNS-----PPNLVIIS 266 (448)
T ss_pred hhhhhccCCCccccccccc--CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccC-----CCCceEee
Confidence 4567899999999999995 5567778775 3344455789999999999999999999999865 45899999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc--ccccch
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS--DFGLAR 838 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~--DFg~a~ 838 (997)
.||+.|+|+..+++..+. .++..+..++|.+|++|++|||+.. |-|.---+.++.++||++.+++|+ |--++-
T Consensus 267 q~mp~gslynvlhe~t~v----vvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf 341 (448)
T KOG0195|consen 267 QYMPFGSLYNVLHEQTSV----VVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF 341 (448)
T ss_pred eeccchHHHHHHhcCccE----EEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee
Confidence 999999999999987632 4788899999999999999999974 344455788999999999988874 433322
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.. .+..-.+.||+||.++.... ...-.++|+|||++++||+.|...||.+...-
T Consensus 342 qe---------------~gr~y~pawmspealqrkpe---------d~n~raadmwsfaillwel~trevpfadlspm-- 395 (448)
T KOG0195|consen 342 QE---------------VGRAYSPAWMSPEALQRKPE---------DLNIRAADMWSFAILLWELNTREVPFADLSPM-- 395 (448)
T ss_pred ec---------------cccccCcccCCHHHHhcCch---------hcchhhhhHHHHHHHHHHhhccccccccCCch--
Confidence 11 12233678999998875331 22345799999999999999999999754221
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
+- .+.+ ..+-.++. .+....+.+.++|.-|++.||.+||.++.|+-.|+++.
T Consensus 396 --ec--gmki---aleglrv~------------ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 396 --EC--GMKI---ALEGLRVH------------IPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred --hh--hhhh---hhcccccc------------CCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 10 0100 00111111 12223457889999999999999999999998888753
No 424
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=4.9e-21 Score=212.83 Aligned_cols=271 Identities=21% Similarity=0.209 Sum_probs=195.9
Q ss_pred cCccCCcccccCcceEEEEEECCCC-cEEEEEEecccchhhHHHHHHHHHHHhhcCC----CCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALKSFVAECEVLRNTRH----RNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~ 754 (997)
.|.+.++||+|+||.||.|....++ ..+|+|+...........+..|+.++..+.. +++..+++... ..+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~----~~~~ 94 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR----STED 94 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc----CCCc
Confidence 7999999999999999999987554 5789998765433322367789999988863 57888887621 3566
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-----CcE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-----MVA 829 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-----~~~ 829 (997)
+.++||+.+ |.+|.++..... ...++..+..+|+.|++.+|+++|+. |++||||||.|++++.. ..+
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~----~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~ 166 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNP----PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTL 166 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCC----CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceE
Confidence 889999998 889999886654 12488999999999999999999999 99999999999999865 369
Q ss_pred EEcccccchhcccCCCCCc-cccccc-cccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 830 HVSDFGLARFLFARPFDTS-METQSS-SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~-~~~~~~-~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+.|||+|+.......... ...... .....||..|+++ ..+.+...+.+.|+||++.++.|+..|.
T Consensus 167 ~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~------------~~H~~~e~~r~DDles~~Y~l~el~~g~ 234 (322)
T KOG1164|consen 167 YLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASI------------NVHLGIEQGRRDDLESLFYMLLELLKGS 234 (322)
T ss_pred EEEecCCCccccccCCCCcccccCCCCccCCCCccccccH------------HHhCCCccCCchhhhhHHHHHHHHhcCC
Confidence 9999999994321111111 011111 3456799999999 6777889999999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.||........ ..+...... . ..... .....+.++.++...+-..+..++|....+...+.+
T Consensus 235 LPW~~~~~~~~-~~~~~~~~~-~---~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 235 LPWEALEMTDL-KSKFEKDPR-K---LLTDR-------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKD 296 (322)
T ss_pred CCCccccccch-HHHHHHHhh-h---hcccc-------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHH
Confidence 99864322111 111110000 0 00000 001123455566666666899999999999999888
Q ss_pred HHHHh
Q 001908 988 ARQTL 992 (997)
Q Consensus 988 ~~~~~ 992 (997)
...+.
T Consensus 297 ~~~~~ 301 (322)
T KOG1164|consen 297 VFDSE 301 (322)
T ss_pred HHHhc
Confidence 76653
No 425
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=8.5e-22 Score=235.87 Aligned_cols=246 Identities=22% Similarity=0.373 Sum_probs=134.7
Q ss_pred ccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEc
Q 001908 219 SLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDL 298 (997)
Q Consensus 219 ~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 298 (997)
+...|++++++++ .+|..+. ++|+.|+|++|+|+ .+|..+. .+|++|+|++|+|+.. |..+. .+|+.|+|
T Consensus 179 ~~~~L~L~~~~Lt-sLP~~Ip---~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~LtsL-P~~l~--~~L~~L~L 248 (754)
T PRK15370 179 NKTELRLKILGLT-TIPACIP---EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLTSI-PATLP--DTIQEMEL 248 (754)
T ss_pred CceEEEeCCCCcC-cCCcccc---cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccccC-Chhhh--ccccEEEC
Confidence 4567788888877 6776553 45677777777777 4555443 3666666666666643 22221 24555555
Q ss_pred cCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEecc
Q 001908 299 GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIE 378 (997)
Q Consensus 299 s~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 378 (997)
++|++..+ |..+. ..|+.|++++|+|+ .+|..+. ++|+.|+++
T Consensus 249 s~N~L~~L-------------------------------P~~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls 291 (754)
T PRK15370 249 SINRITEL-------------------------------PERLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVY 291 (754)
T ss_pred cCCccCcC-------------------------------ChhHh---CCCCEEECcCCccC-ccccccC--CCCcEEECC
Confidence 55555433 33221 23444444444444 2344332 356677777
Q ss_pred CCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCc
Q 001908 379 FNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAV 458 (997)
Q Consensus 379 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 458 (997)
+|+|++ +|..+. ++|+.|+|++|+++. +|..+. ++|+.|++++|.+++ +|..+. ++|+.|++++|+++ .+
T Consensus 292 ~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~L 361 (754)
T PRK15370 292 DNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VL 361 (754)
T ss_pred CCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cC
Confidence 776663 444332 356777777777763 454332 566777777777764 555443 56677777777665 45
Q ss_pred ccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccc----cCCcCccEEEccCcccc
Q 001908 459 PQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTL----TGCTGLEIFHMQGNSFR 528 (997)
Q Consensus 459 p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----~~l~~L~~L~Ls~N~l~ 528 (997)
|..+. +.+ +.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .+|..+ ..++.+..|++.+|.++
T Consensus 362 P~~lp--~~L-~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 362 PETLP--PTI-TTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred Chhhc--CCc-CEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 54332 233 55666666666 3444332 24666666666665 444332 22344555555555554
No 426
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.85 E-value=4.8e-22 Score=230.66 Aligned_cols=265 Identities=21% Similarity=0.255 Sum_probs=188.7
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHH--HhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEV--LRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++...+.+|++.|=.|.+|+++ .|. |+||++-... .-..+.+.++++- ...++|||++++.-+ .......
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~-----~~t~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKV-----LVTDKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHH-----HHhhHHH
Confidence 6777899999999999999996 454 9999995443 3334444444443 444589999988765 3445677
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+|-+|. .-+|+|++..+. -+...+.+.||.|++.|+..+|+. +|+|+|||.+||||+.-.-+.|+||..
T Consensus 97 ylvRqyv-khnLyDRlSTRP------FL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 97 YLVRQYV-KHNLYDRLSTRP------FLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHHHHHH-hhhhhhhhccch------HHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 8888888 459999998765 467788899999999999999999 999999999999999999999999998
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
-+..+-+...++.......+. ..-.+|.|||.+....+.. ....... .+++.||||+|||++|+++ |++||+
T Consensus 167 FKPtYLPeDNPadf~fFFDTS-rRRtCYiAPERFv~~~~~~--~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~--- 240 (1431)
T KOG1240|consen 167 FKPTYLPEDNPADFTFFFDTS-RRRTCYIAPERFVSALGKT--SVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT--- 240 (1431)
T ss_pred cCCccCCCCCcccceEEEecC-CceeeecChHhhhcccccc--ccCCcccccChhhhhhhhhHHHHHHHhcCCCccc---
Confidence 776654444443333222222 2334899999997633111 2222333 6789999999999999999 788887
Q ss_pred CCCccHHHHHHhhcchhhhhhcCccc-ccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSL-LLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
+.+ .+.++-.+..++.. ....++ ..+..++..|++.||++|.++.++++.-.+
T Consensus 241 -----LSQ----L~aYr~~~~~~~e~~Le~Ied-----------~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG 294 (1431)
T KOG1240|consen 241 -----LSQ----LLAYRSGNADDPEQLLEKIED-----------VSLRNLILSMIQRDPSKRLSAEDYLQKYRG 294 (1431)
T ss_pred -----HHH----HHhHhccCccCHHHHHHhCcC-----------ccHHHHHHHHHccCchhccCHHHHHHhhhc
Confidence 221 12222222222221 111111 246689999999999999999999987443
No 427
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=5.9e-20 Score=187.61 Aligned_cols=268 Identities=18% Similarity=0.208 Sum_probs=198.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.|.++++||+|.||+++.|+.--++++||||.-...++ ...+..|....+.+ ..++|..++-+ -...-+-.+
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYF-----GqeG~~NiL 101 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYF-----GQEGKYNIL 101 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeee-----ccccchhhh
Confidence 68999999999999999999988999999998653322 24566778877777 57888887754 233456789
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-----cEEEcc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-----VAHVSD 833 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-----~~kl~D 833 (997)
|+|.. |.+|+|...-.+. .++..++..+|.|++.-++|+|++ ..|+|||||+|+||...+ .+.++|
T Consensus 102 VidLL-GPSLEDLFD~CgR-----~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiD 172 (449)
T KOG1165|consen 102 VIDLL-GPSLEDLFDLCGR-----RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIID 172 (449)
T ss_pred hhhhh-CcCHHHHHHHhcC-----cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEe
Confidence 99998 8899999887653 489999999999999999999999 999999999999998654 689999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+...++..+.- -.........||..||+- ..+.|.+.+.+.|+=|+|-++.+.+.|..||...
T Consensus 173 FGmAK~YrDp~TkqH-IPYrE~KSLsGTARYMSI------------NTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGL 239 (449)
T KOG1165|consen 173 FGMAKEYRDPKTKQH-IPYREHKSLSGTARYMSI------------NTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGL 239 (449)
T ss_pred ccchhhhcCcccccc-CccccccccccceeeeEe------------eccccchhhhhhhHHHhhhhhhhhccCCCccccc
Confidence 999998855443221 222334456799999987 7788999999999999999999999999999854
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
-... .-..+.. +-+..-.. ......+..|.++.+-+.-.-+.+-.+-|..+-+-..+.++...
T Consensus 240 KA~t-nK~kYeK---------IGe~Kr~T-----~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 240 KADT-NKEKYEK---------IGETKRST-----PIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred cCcc-hHHHHHH---------hccccccC-----CHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 3221 1111111 11100000 00112233455666666667777888888877777766666554
No 428
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.84 E-value=1.4e-20 Score=183.78 Aligned_cols=208 Identities=26% Similarity=0.338 Sum_probs=165.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC-CCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH-RNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~l~~~~~~~~~~~~~~~ 756 (997)
...|.+.++||.|+||.+|.|..-.+|.+||+|+-..... -..+..|..+.+.+++ ..|..+..| ..+..+-
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y-----~~e~~yn 86 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHY-----GTEKDYN 86 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhh-----ccccccc
Confidence 4679999999999999999999999999999998753322 2456778888888864 456666655 4456688
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC---CcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~---~~~kl~D 833 (997)
.+|||.. |.+|++...-... .++..+++-.|-|++.-++|+|.+ +++||||||+|.|+.-+ ..+.++|
T Consensus 87 vlVMdLL-GPsLEdLfnfC~R-----~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LID 157 (341)
T KOG1163|consen 87 VLVMDLL-GPSLEDLFNFCSR-----RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLID 157 (341)
T ss_pred eeeeecc-CccHHHHHHHHhh-----hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEe
Confidence 9999999 8899999876542 388999999999999999999999 99999999999999754 4688999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+...+..... .-.........||..|.+- ..+.+.+.+...|+=|+|.|+.+.-.|..||...
T Consensus 158 FGLaKky~d~~t~~-HIpyre~r~ltGTaRYASi------------nAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl 224 (341)
T KOG1163|consen 158 FGLAKKYRDIRTRQ-HIPYREDRNLTGTARYASI------------NAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL 224 (341)
T ss_pred ccchhhhccccccc-cCccccCCccceeeeehhh------------hhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence 99999875432211 1122233446789999876 4455667788999999999999999999999865
Q ss_pred c
Q 001908 914 F 914 (997)
Q Consensus 914 ~ 914 (997)
.
T Consensus 225 k 225 (341)
T KOG1163|consen 225 K 225 (341)
T ss_pred c
Confidence 3
No 429
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=2.6e-20 Score=219.34 Aligned_cols=257 Identities=19% Similarity=0.219 Sum_probs=183.2
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecc-----cchhh-HHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNL-----MQKGA-LKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~-----~~~~~-~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..+.+|.|++|.|+.+......+.++.|.+.. ..... ...+..|..+-..+.|+|++..+..+.+. ...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~-----~~~ 396 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI-----DGI 396 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc-----ccc
Confidence 46789999999888888876666666665431 11111 11245566667778999998877764332 223
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
.-+||||++ +|..++.... .+....+-.++.|+..|++|+|+. ||.|||+|++|++++.+|.+||+|||.
T Consensus 397 ~~~mE~~~~-Dlf~~~~~~~------~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~ 466 (601)
T KOG0590|consen 397 LQSMEYCPY-DLFSLVMSNG------KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGA 466 (601)
T ss_pred hhhhhcccH-HHHHHHhccc------ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCc
Confidence 333999999 9999998763 266677888999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCc-cchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV-TGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~-~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+.....+.. .........+|+.+|+|||++. +..|.+ ..||||.|+++..|.+|+.||.....
T Consensus 467 ~~vf~~~~e----~~~~~~~g~~gS~pY~apE~~~------------~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~ 530 (601)
T KOG0590|consen 467 ASVFRYPWE----KNIHESSGIVGSDPYLAPEVLT------------GKEYDPRAVDVWSCGIIYICMILGRFPWKVAKK 530 (601)
T ss_pred ceeeccCcc----hhhhhhcCcccCCcCcCccccc------------ccccCcchhhhhhccceEEEEecCCCccccccc
Confidence 875422111 1124456688999999996554 566765 58999999999999999999874433
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...... .....+ ......+........+.+...++..|+++||.+|.|+++|++.
T Consensus 531 ~~~~~~----------~~~~~~----~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 531 SDNSFK----------TNNYSD----QRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred cccchh----------hhcccc----ccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 222110 000000 0111122233345567778899999999999999999999763
No 430
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.80 E-value=1.7e-18 Score=194.05 Aligned_cols=267 Identities=29% Similarity=0.393 Sum_probs=191.1
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEecccchh---hHHHHHHHHHHHhhcCCC-CcceEEeeeeccCcCCCceE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG---ALKSFVAECEVLRNTRHR-NLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~h~-niv~l~~~~~~~~~~~~~~~ 756 (997)
|...+.||.|+||.||++... ..+|+|.+...... ....+.+|+.+++.+.|+ +++++.+++ ......
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~-----~~~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF-----QDEGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE-----ecCCEE
Confidence 667789999999999999996 78999998743322 467889999999999988 799999985 334458
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEcccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFG 835 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFg 835 (997)
++++|++.++++.+++...... ..+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg 147 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRK---GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFG 147 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccC
Confidence 9999999999999777765311 2477889999999999999999999 999999999999999998 79999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.++............ .......||..|+|||.+.... ...++...|+||+|++++++++|..||.....
T Consensus 148 ~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~pe~~~~~~---------~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~ 216 (384)
T COG0515 148 LAKLLPDPGSTSSIP--ALPSTSVGTPGYMAPEVLLGLS---------LAYASSSSDIWSLGITLYELLTGLPPFEGEKN 216 (384)
T ss_pred cceecCCCCcccccc--ccccccccccccCCHHHhcCCC---------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence 998542221110000 1345578999999997654210 14678899999999999999999999664322
Q ss_pred C--CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 916 G--GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 916 ~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
. .....+...... .+........... ......+.+++..|+..+|..|.++.+....
T Consensus 217 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 217 SSATSQTLKIILELP--------TPSLASPLSPSNP----ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cccHHHHHHHHHhcC--------CcccccccCcccc----chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 1 011111111110 0000000000000 1223456788889999999999998887664
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=1.6e-19 Score=184.78 Aligned_cols=176 Identities=16% Similarity=0.171 Sum_probs=131.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhh---HHH------HHHHHHHHhhcCCCCcceEEeeeec
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA---LKS------FVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~---~~~------~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
..++|+..+.+|.|+||.||.+.. ++..+|+|+++...... ... +.+|++.+++++|++|..+..++..
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 457899999999999999999766 46689999997432222 122 5789999999999999999888543
Q ss_pred cCc---CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 748 IDF---KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 748 ~~~---~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
... ......++||||++|.+|.++.. .+. ....+++.++..+|.. |++|||+||+||+++
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~----------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~ 169 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE----------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVS 169 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh----------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEe
Confidence 211 12346899999999999988732 222 2356899999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.+| ++++|||.......+. |-+ .+.....+..++|+|+||+.+....
T Consensus 170 ~~g-i~liDfg~~~~~~e~~---------------------a~d-----------~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 170 KNG-LRIIDLSGKRCTAQRK---------------------AKD-----------RIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CCC-EEEEECCCcccccchh---------------------hHH-----------HHHHHhHhcccccccceeEeehHHH
Confidence 999 9999999876431100 000 1222344667899999999987654
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=5.8e-21 Score=176.92 Aligned_cols=166 Identities=30% Similarity=0.535 Sum_probs=115.4
Q ss_pred CCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCC
Q 001908 365 GIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNL 444 (997)
Q Consensus 365 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 444 (997)
.+.++.+.+.|.|++|+++ .+|+.++.+.+|+.|++++|+|+ .+|..++.+++|+.|+++-|++. ..|..|+.++.|
T Consensus 28 gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~l 104 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPAL 104 (264)
T ss_pred cccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchh
Confidence 3445677788888888888 67778888889999999999998 78888888899999999988888 788888888888
Q ss_pred cEEecCCCcccC-CcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEcc
Q 001908 445 VSLNLSDNKLIG-AVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQ 523 (997)
Q Consensus 445 ~~L~L~~N~l~~-~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (997)
+.|||.+|++.. .+|..|+. ++.|+.|+|+.|.+. .+|..++++++|+.|.+.
T Consensus 105 evldltynnl~e~~lpgnff~-------------------------m~tlralyl~dndfe-~lp~dvg~lt~lqil~lr 158 (264)
T KOG0617|consen 105 EVLDLTYNNLNENSLPGNFFY-------------------------MTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLR 158 (264)
T ss_pred hhhhccccccccccCCcchhH-------------------------HHHHHHHHhcCCCcc-cCChhhhhhcceeEEeec
Confidence 888888888752 34444444 444555555555554 455555555555555555
Q ss_pred CccccccCChhccccCcCCeeeCccccccccCchhccC
Q 001908 524 GNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLEN 561 (997)
Q Consensus 524 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 561 (997)
.|.+- ..|..++.+.+|+.|.+.+|+++ .+|..+++
T Consensus 159 dndll-~lpkeig~lt~lrelhiqgnrl~-vlppel~~ 194 (264)
T KOG0617|consen 159 DNDLL-SLPKEIGDLTRLRELHIQGNRLT-VLPPELAN 194 (264)
T ss_pred cCchh-hCcHHHHHHHHHHHHhcccceee-ecChhhhh
Confidence 55554 45555555555666666666655 45555544
No 433
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=3.1e-19 Score=181.45 Aligned_cols=139 Identities=18% Similarity=0.150 Sum_probs=106.8
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchh--h------------------------HHHHHHHHHHHhhcCCCC
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--A------------------------LKSFVAECEVLRNTRHRN 737 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~--~------------------------~~~~~~E~~~l~~l~h~n 737 (997)
...||+|++|.||+|... +|+.||||+++..... . .....+|++.+.++.+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 468999999999999997 8999999999743211 0 012245999999998877
Q ss_pred cceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHH-hhCCCCCcEecCC
Q 001908 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHCQPPIVHGDL 816 (997)
Q Consensus 738 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yL-H~~~~~~ivHrDl 816 (997)
+.....+. . ...++||||++++++........ .++.....+++.|++.++.|+ |+. +|+||||
T Consensus 81 v~~p~~~~----~---~~~~iVmE~i~g~~l~~~~~~~~------~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDl 144 (190)
T cd05147 81 IPCPEPIL----L---KSHVLVMEFIGDDGWAAPRLKDA------PLSESKARELYLQVIQIMRILYQDC---RLVHADL 144 (190)
T ss_pred CCCCcEEE----e---cCCEEEEEEeCCCCCcchhhhcC------CCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 64333221 1 12389999998877765433222 377888999999999999999 687 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccchhc
Q 001908 817 KPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+||+++ ++.++++|||+|...
T Consensus 145 kP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 145 SEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred CHHHEEEE-CCcEEEEEccccccC
Confidence 99999998 588999999999743
No 434
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=1.3e-18 Score=173.78 Aligned_cols=193 Identities=17% Similarity=0.058 Sum_probs=137.3
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchh----hHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG----ALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~----~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.+...|++|+||+||.+.. .+.+++.+.+.....- ....+.+|+++|++++ |+++++++++ +..
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~---------~~~ 73 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW---------DGR 73 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE---------cCE
Confidence 4568899999999997766 6788887777643221 1225789999999995 5889999886 146
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC-CCCCeeeCCCCcEEEcccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL-KPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl-k~~NIll~~~~~~kl~DFg 835 (997)
+++|||++|.+|.+.... ....++.|++.+++++|++ ||+|||| ||+||+++.++.++|+|||
T Consensus 74 ~lvmeyI~G~~L~~~~~~-------------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG 137 (218)
T PRK12274 74 HLDRSYLAGAAMYQRPPR-------------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQ 137 (218)
T ss_pred EEEEeeecCccHHhhhhh-------------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECC
Confidence 999999999998754321 1124678999999999999 9999999 7999999999999999999
Q ss_pred cchhcccCCCC-----CccccccccccccccccccCCcchhcccccCccccCCCCCCC-ccchhHHHHHHHHHHHhCCCC
Q 001908 836 LARFLFARPFD-----TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS-VTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 836 ~a~~~~~~~~~-----~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~-~~~DvwSlGvvl~elltg~~P 909 (997)
+|......... ...-..........++.|++|+.-. .-...+ ...+.++.|+-+|.++|++.|
T Consensus 138 ~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~-----------~l~~~~~~~~~w~~~g~~~~~~~~~~~~ 206 (218)
T PRK12274 138 LAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERR-----------VLKRTSWIRELWFATGKPVYRFVTRRVL 206 (218)
T ss_pred CceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHh-----------hhccchhHHHHHHHhcchHHHHHhccCC
Confidence 99854221100 0000000011123566777775321 122233 567999999999999999988
Q ss_pred CCc
Q 001908 910 TNC 912 (997)
Q Consensus 910 ~~~ 912 (997)
...
T Consensus 207 ~~~ 209 (218)
T PRK12274 207 HWE 209 (218)
T ss_pred ccc
Confidence 653
No 435
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.78 E-value=3.1e-21 Score=178.69 Aligned_cols=179 Identities=29% Similarity=0.436 Sum_probs=141.5
Q ss_pred CCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccce
Q 001908 416 NLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVA 495 (997)
Q Consensus 416 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~ 495 (997)
++.+++.|-||+|+++ .+|..+..+.+|+.|++++|++. .+|.++..++++ +.|+++-|++. ..|..|+.++.|+.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~kl-r~lnvgmnrl~-~lprgfgs~p~lev 106 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKL-RILNVGMNRLN-ILPRGFGSFPALEV 106 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhh-hheecchhhhh-cCccccCCCchhhh
Confidence 4445555556666665 45555566666666666666655 566666666666 66666666666 78888999999999
Q ss_pred eccccccccc-cccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCc
Q 001908 496 LYISGNQFSG-EIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNH 574 (997)
Q Consensus 496 L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~ 574 (997)
|||++|++.. .+|..|..++.|+-|+|+.|.|. .+|..++++++|+.|.+..|.+- ..|..++.++.|++|.+.+|+
T Consensus 107 ldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 107 LDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 9999998864 57999999999999999999998 89999999999999999999998 789999999999999999999
Q ss_pred CcccCCCCCcC---CCCcceeecCCCCcC
Q 001908 575 FDGEVPTKGVF---SNKTRVQLTGNGKLC 600 (997)
Q Consensus 575 l~~~~p~~~~~---~~~~~~~~~~N~~~C 600 (997)
++-.+|..+.+ .+.....++.|||.-
T Consensus 185 l~vlppel~~l~l~~~k~v~r~E~NPwv~ 213 (264)
T KOG0617|consen 185 LTVLPPELANLDLVGNKQVMRMEENPWVN 213 (264)
T ss_pred eeecChhhhhhhhhhhHHHHhhhhCCCCC
Confidence 99888876544 445667788898854
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.77 E-value=1.4e-20 Score=210.33 Aligned_cols=282 Identities=25% Similarity=0.316 Sum_probs=136.1
Q ss_pred EeccCccCC-CcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCccccccccccccc
Q 001908 272 IDLPINYFT-GKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTD 350 (997)
Q Consensus 272 L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~ 350 (997)
|+|+.+.++ ......|..+.+|+.|+++++.++..+. ..++..+...++|++|+++++.+.+ .+..+
T Consensus 3 l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~--~~i~~~l~~~~~l~~l~l~~~~~~~-~~~~~--------- 70 (319)
T cd00116 3 LSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAA--KALASALRPQPSLKELCLSLNETGR-IPRGL--------- 70 (319)
T ss_pred cccccCcccccchHHHHHHHhhccEEeecCCCCcHHHH--HHHHHHHhhCCCceEEeccccccCC-cchHH---------
Confidence 444444444 2233344445555555555555432111 1233344555556666666655542 11111
Q ss_pred ccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccc---cceeccccccccc----cchhhhcCC-CCCCe
Q 001908 351 IYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRN---LQAIGLSSNFLQG----NIPSSLGNL-TLMTD 422 (997)
Q Consensus 351 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~---L~~L~Ls~N~l~~----~~p~~~~~l-~~L~~ 422 (997)
..++..+..+++|+.|++++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.
T Consensus 71 ---------~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~ 141 (319)
T cd00116 71 ---------QSLLQGLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEK 141 (319)
T ss_pred ---------HHHHHHHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceE
Confidence 122334444556666666666665544444444444 6666666666652 223344455 66666
Q ss_pred EEeecCcCCCC----CCCCCCCCCCCcEEecCCCcccCC----cccccccccccccccccCCCcccCC----Cccccccc
Q 001908 423 LFLSSNHLQGN----IPPSLGNCKNLVSLNLSDNKLIGA----VPQQILTITTLSRFLDLGNNHLNGS----LPLEVGNL 490 (997)
Q Consensus 423 L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~ll~~L~Ls~N~l~~~----~p~~~~~l 490 (997)
|+|++|.+++. ++..+..+++|++|++++|.+++. ++..+...+++ +.|++++|.+++. ++..+..+
T Consensus 142 L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L-~~L~L~~n~i~~~~~~~l~~~~~~~ 220 (319)
T cd00116 142 LVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNL-EVLDLNNNGLTDEGASALAETLASL 220 (319)
T ss_pred EEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCC-CEEeccCCccChHHHHHHHHHhccc
Confidence 66666666632 223344555666666666666532 11222222333 4455555544422 22233445
Q ss_pred cccceecccccccccccccccc-----CCcCccEEEccCcccc----ccCChhccccCcCCeeeCcccccccc----Cch
Q 001908 491 KNLVALYISGNQFSGEIPVTLT-----GCTGLEIFHMQGNSFR----GSIPLSLRSLKSIKELDLSCNNLSGQ----IPE 557 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~ 557 (997)
++|++|++++|.+++.....+. ..+.|+.|++++|.++ ..+...+..+++|+.+|+++|.++.. ...
T Consensus 221 ~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~ 300 (319)
T cd00116 221 KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAE 300 (319)
T ss_pred CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHH
Confidence 5666666666666542222222 1255666666666654 12233444455666666666666533 333
Q ss_pred hccCC-CCCCEEeCCCCcC
Q 001908 558 FLENL-SFLEYLNLSYNHF 575 (997)
Q Consensus 558 ~~~~l-~~L~~L~ls~N~l 575 (997)
.+... +.|++|++.+|++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 301 SLLEPGNELESLWVKDDSF 319 (319)
T ss_pred HHhhcCCchhhcccCCCCC
Confidence 33333 4555555555543
No 437
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.77 E-value=1.1e-18 Score=181.98 Aligned_cols=212 Identities=19% Similarity=0.215 Sum_probs=146.3
Q ss_pred CCCCcceEEeeeeccC----------------------cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHH
Q 001908 734 RHRNLIKIITVCSSID----------------------FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLN 791 (997)
Q Consensus 734 ~h~niv~l~~~~~~~~----------------------~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~ 791 (997)
.|||||++.+++.+.- ...+...|+||..+ ..+|.+++..+. .+.....-
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY-~~tLr~yl~~~~-------~s~r~~~~ 345 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRY-RQTLREYLWTRH-------RSYRTGRV 345 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcc-hhhHHHHHhcCC-------CchHHHHH
Confidence 5999999988753321 12245688999998 459999998875 56667778
Q ss_pred HHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC--CCC--cEEEcccccchhcccCCCCCccccccccccccccccccCC
Q 001908 792 IAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDM--VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPP 867 (997)
Q Consensus 792 i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~--~~~--~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP 867 (997)
|..|+++|+.|||.+ ||.|||+|++|||+. +|+ ...|+|||.+--....... ...........|...-|||
T Consensus 346 ~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlq--lpy~S~~Vd~GGNa~lmAP 420 (598)
T KOG4158|consen 346 ILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQ--LPYESDEVDLGGNAKLMAP 420 (598)
T ss_pred HHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccc--cccccccccCCCcceecch
Confidence 899999999999999 999999999999994 444 5788999987532111100 1111122234567789999
Q ss_pred cchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccc
Q 001908 868 GNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDG 947 (997)
Q Consensus 868 E~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 947 (997)
|+...+.+... ..-..|+|.|+.|.+.||+++..-||+...+--.+...+ .+.
T Consensus 421 Ei~ta~PGp~a------vvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y---------------------qe~ 473 (598)
T KOG4158|consen 421 EIATAVPGPNA------VVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY---------------------QES 473 (598)
T ss_pred hhhhcCCCCce------eeccchhhhhhhhhhHHHHhccCCcccccchheechhhh---------------------hhh
Confidence 98865432110 112358999999999999999999998521111111111 111
Q ss_pred hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 948 RRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 948 ~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
.....++.+++.+.+++...++.||++|++..-+...+
T Consensus 474 qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 474 QLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 22234556777888999999999999999977665544
No 438
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=3.4e-18 Score=174.68 Aligned_cols=138 Identities=21% Similarity=0.207 Sum_probs=108.7
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchh--------------------------hHHHHHHHHHHHhhcCCCC
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--------------------------ALKSFVAECEVLRNTRHRN 737 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~h~n 737 (997)
.+.||+|++|.||+|+.. +|+.||||+++..... ....+.+|.+.+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 578999999999999987 8999999998743210 0122357899999999998
Q ss_pred cceEEeeeeccCcCCCceEEEEEeeccCCCHHHH-hhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecC
Q 001908 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEW-LHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGD 815 (997)
Q Consensus 738 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrD 815 (997)
+.....+.. ...++||||++++++... +... ..+.....+++.|++.++.|+|+ . ||+|||
T Consensus 81 i~~p~~~~~-------~~~~lVmE~~~g~~~~~~~l~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~---givHrD 143 (190)
T cd05145 81 VPVPEPILL-------KKNVLVMEFIGDDGSPAPRLKDV-------PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGD 143 (190)
T ss_pred CCCceEEEe-------cCCEEEEEEecCCCchhhhhhhc-------cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCC
Confidence 754443321 124899999988755443 3322 35677889999999999999999 8 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhc
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
|||+||+++ ++.++++|||+|+..
T Consensus 144 lkP~NIll~-~~~~~liDFG~a~~~ 167 (190)
T cd05145 144 LSEYNILYH-DGKPYIIDVSQAVEL 167 (190)
T ss_pred CChhhEEEE-CCCEEEEEcccceec
Confidence 999999998 899999999999765
No 439
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.76 E-value=2.1e-18 Score=193.17 Aligned_cols=225 Identities=26% Similarity=0.384 Sum_probs=165.0
Q ss_pred HhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCC
Q 001908 730 LRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQP 809 (997)
Q Consensus 730 l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~ 809 (997)
|+.+.|.|+.+++|.+... ...+.|.+||..|+|.+.+.... ..+++.....+.++|++||.|+|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~-----~~~~~i~~~c~rGsl~D~i~~~~-----~~~d~~F~~s~~rdi~~Gl~ylh~s--- 67 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG-----PEMIVIWEYCSRGSLLDILSNED-----IKLDYFFILSFIRDISKGLAYLHNS--- 67 (484)
T ss_pred CcccchhhhhhheeeEecC-----CceEEEEeeecCccHHhHHhccc-----cCccHHHHHHHHHHHHHHHHHHhcC---
Confidence 4578999999999998653 58899999999999999998743 3589999999999999999999998
Q ss_pred Cc-EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCC
Q 001908 810 PI-VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEAS 888 (997)
Q Consensus 810 ~i-vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~ 888 (997)
+| .|+.++++|+++|....+|++|||+....... .............-|.|||.+..... .......+
T Consensus 68 ~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~------~~~~~~~~~~~~~lw~aPellr~~~~-----~~~~~~~~ 136 (484)
T KOG1023|consen 68 PIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEET------AEPEAHHPIRKALLWTAPELLRGALS-----QSLESALT 136 (484)
T ss_pred cceeeeeeccccceeeeeEEEEechhhhccccccc------ccccccchhHHHHhccCHHHhccccc-----cccccccc
Confidence 55 99999999999999999999999998765320 01111112224557999998875321 11113367
Q ss_pred ccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcC
Q 001908 889 VTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACS 968 (997)
Q Consensus 889 ~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 968 (997)
.++||||||++++|+++...||+........ .+.+.... +.......|.+.. ..+.++++..++..||
T Consensus 137 ~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~-~eii~~~~-~~~~~~~rP~i~~----------~~e~~~~l~~l~~~cw 204 (484)
T KOG1023|consen 137 QKGDIYSFGIIMYEILFRSGPFDLRNLVEDP-DEIILRVK-KGGSNPFRPSIEL----------LNELPPELLLLVARCW 204 (484)
T ss_pred ccCCeehHHHHHHHHHhccCccccccccCCh-HHHHHHHH-hcCCCCcCcchhh----------hhhcchHHHHHHHHhc
Confidence 8899999999999999999999864333322 22222211 1112223333221 1144557889999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHHH
Q 001908 969 MESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 969 ~~dP~~Rps~~evl~~L~~~~~ 990 (997)
..+|.+||+++++-..++.+..
T Consensus 205 ~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 205 EEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred ccChhhCccHHHHHhhhhhhcc
Confidence 9999999999999888887665
No 440
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.75 E-value=2.8e-18 Score=180.98 Aligned_cols=248 Identities=20% Similarity=0.250 Sum_probs=152.1
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcC----------CCCcceEEeeee
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTR----------HRNLIKIITVCS 746 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~----------h~niv~l~~~~~ 746 (997)
.+...+.||.|+++.||.+++.++++++|||++... .....+.+.+|.-....+. |-.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 445678999999999999999999999999998632 2334566666665554432 212222222211
Q ss_pred ccC----cC-----CCc---eEEEEEeeccCCCHHHHhhc---CCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 747 SID----FK-----GAD---FKALVYEYMQNGSLEEWLHQ---SNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 747 ~~~----~~-----~~~---~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
-.. +. ... ..+++|+-+ .+||.+++.. .... ........++.+..|+++.+++||+. |+
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~--~~~l~~~arl~lT~Q~I~lvA~Lh~~---Gl 166 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQT--HSPLAFAARLSLTVQMIRLVANLHSY---GL 166 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTT--SHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccc--cchhHHHHHHHHHHHHHHHHHHHhhc---ce
Confidence 100 00 001 246677777 5588887653 2211 11244566778889999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+|+||||+|++++.+|.++++||+....... .......+..|.+||......... . ....++.+.
T Consensus 167 VHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~-----------~~~~~~~~~~~~PPe~~~~~~~~~--~--~~~~~t~~~ 231 (288)
T PF14531_consen 167 VHGDIKPENFLLDQDGGVFLGDFSSLVRAGT-----------RYRCSEFPVAFTPPELESCAGQFG--Q--NNAPYTFAT 231 (288)
T ss_dssp EEST-SGGGEEE-TTS-EEE--GGGEEETTE-----------EEEGGGS-TTTS-HHHHHHHTSCH--H--SEEEE-HHH
T ss_pred EecccceeeEEEcCCCCEEEcChHHHeecCc-----------eeeccCCCcccCChhhhhhhcccC--c--ccceeeecc
Confidence 9999999999999999999999998765311 111123457789998765421100 0 224578899
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|.|++|+++|.|++++.||+....... ++. .+..+. +.++.+.+||..+++++
T Consensus 232 DaW~LG~~ly~lWC~~lPf~~~~~~~~------------------~~~---~f~~C~------~~Pe~v~~LI~~lL~~~ 284 (288)
T PF14531_consen 232 DAWQLGITLYSLWCGRLPFGLSSPEAD------------------PEW---DFSRCR------DMPEPVQFLIRGLLQRN 284 (288)
T ss_dssp HHHHHHHHHHHHHHSS-STCCCGGGST------------------SGG---GGTTSS---------HHHHHHHHHHT-SS
T ss_pred CHHHHHHHHHHHHHccCCCCCCCcccc------------------ccc---cchhcC------CcCHHHHHHHHHHccCC
Confidence 999999999999999999984422110 000 111111 45678899999999999
Q ss_pred CCCC
Q 001908 972 PIER 975 (997)
Q Consensus 972 P~~R 975 (997)
|.+|
T Consensus 285 ~~~R 288 (288)
T PF14531_consen 285 PEDR 288 (288)
T ss_dssp GGGS
T ss_pred cccC
Confidence 9988
No 441
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=5.8e-20 Score=205.24 Aligned_cols=283 Identities=22% Similarity=0.280 Sum_probs=146.0
Q ss_pred eeeccCCCCCCCCCccccccCCCccEEEecCCcCcC----CCCCCCCCCCCCcEEeccCccCCC------cccccccccC
Q 001908 222 NILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSG----SIPESFSNASNIEIIDLPINYFTG------KVSIIFGRLK 291 (997)
Q Consensus 222 ~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~------~~~~~~~~l~ 291 (997)
.|+|+.+.+++.-=..++..+++|++|+++++.++. .++..+...++|++|+++++.+.+ .++..|..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 467777777632222334456667777777777643 244555566666666666666552 1123344444
Q ss_pred ccCeeEccCccCCCCCCCCcchhhhhccC---CCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCC
Q 001908 292 NLWSLDLGINNLGSGGANDLDFVTILTNC---SKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGN 368 (997)
Q Consensus 292 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~ 368 (997)
+|+.|++++|.+.... +..+..+ ++|++|++++|++++... ..+...+..
T Consensus 82 ~L~~L~l~~~~~~~~~------~~~~~~l~~~~~L~~L~ls~~~~~~~~~---------------------~~l~~~l~~ 134 (319)
T cd00116 82 GLQELDLSDNALGPDG------CGVLESLLRSSSLQELKLNNNGLGDRGL---------------------RLLAKGLKD 134 (319)
T ss_pred ceeEEEccCCCCChhH------HHHHHHHhccCcccEEEeeCCccchHHH---------------------HHHHHHHHh
Confidence 5555555555443211 1111111 224444444444432100 011122333
Q ss_pred C-CCCCEEeccCCCCCCC----CCCCcccccccceecccccccccc----chhhhcCCCCCCeEEeecCcCCCC----CC
Q 001908 369 L-VNLNLLGIEFNQLTGN----IPREIGQLRNLQAIGLSSNFLQGN----IPSSLGNLTLMTDLFLSSNHLQGN----IP 435 (997)
Q Consensus 369 l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p 435 (997)
+ ++|+.|++++|.+++. ++..+..+++|++|+|++|.+++. ++..+..+++|+.|+|++|.+++. ++
T Consensus 135 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 214 (319)
T cd00116 135 LPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALA 214 (319)
T ss_pred CCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHH
Confidence 3 5666666666666632 222344445566666666666532 233344445666666666665432 22
Q ss_pred CCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccc----ccccccc
Q 001908 436 PSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFS----GEIPVTL 511 (997)
Q Consensus 436 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~ 511 (997)
..+..+++|++|++++|.+++.....+... . ....+.|+.|++++|.++ ..+...+
T Consensus 215 ~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~-----------------~---~~~~~~L~~L~l~~n~i~~~~~~~l~~~~ 274 (319)
T cd00116 215 ETLASLKSLEVLNLGDNNLTDAGAAALASA-----------------L---LSPNISLLTLSLSCNDITDDGAKDLAEVL 274 (319)
T ss_pred HHhcccCCCCEEecCCCcCchHHHHHHHHH-----------------H---hccCCCceEEEccCCCCCcHHHHHHHHHH
Confidence 334445556666666655543111111100 0 012357788888888776 2334455
Q ss_pred cCCcCccEEEccCcccccc----CChhcccc-CcCCeeeCccccc
Q 001908 512 TGCTGLEIFHMQGNSFRGS----IPLSLRSL-KSIKELDLSCNNL 551 (997)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l-~~L~~L~Ls~N~l 551 (997)
..+++|+++++++|.++.. ....+... +.|+.||+.+|.+
T Consensus 275 ~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 275 AEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred hcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 6667888888888888744 34444444 6888888888754
No 442
>PLN03150 hypothetical protein; Provisional
Probab=99.74 E-value=3.7e-18 Score=204.49 Aligned_cols=153 Identities=30% Similarity=0.459 Sum_probs=127.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCC----eeeeeeecC--CC--CcEEEEeccCCCCCCcccccccCcccc
Q 001908 29 HTNETDRLALLAIKSQLHDPLGVTNSWNNSINLC----QWAGVTCGH--RH--QRVTELDLRHQNIGGSLSPYVGNLSFL 100 (997)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~~c----~w~gv~C~~--~~--~~v~~L~L~~~~l~g~~~~~l~~l~~L 100 (997)
.+.+.|..||++||+++.+|.. .+|++ ..|| .|.||+|+. .. .+|+.|+|++|++.|.+|+.++.|++|
T Consensus 368 ~t~~~~~~aL~~~k~~~~~~~~--~~W~g-~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L 444 (623)
T PLN03150 368 KTLLEEVSALQTLKSSLGLPLR--FGWNG-DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHL 444 (623)
T ss_pred ccCchHHHHHHHHHHhcCCccc--CCCCC-CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCC
Confidence 3567899999999999876643 48974 3443 799999953 22 369999999999999999999999999
Q ss_pred ccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeeccc
Q 001908 101 RYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLAR 180 (997)
Q Consensus 101 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~ 180 (997)
++|+|++|++.|.+|..++.+++|++|||++|+|+|.+|..++++++|+.|++++|++.|.+|..++....++..+++++
T Consensus 445 ~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 445 QSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRASFNFTD 524 (623)
T ss_pred CEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCceEEecC
Confidence 99999999999999999999999999999999999999999999999988888888888877777664444555666666
Q ss_pred cccc
Q 001908 181 NHLT 184 (997)
Q Consensus 181 N~l~ 184 (997)
|...
T Consensus 525 N~~l 528 (623)
T PLN03150 525 NAGL 528 (623)
T ss_pred Cccc
Confidence 6543
No 443
>PRK10345 hypothetical protein; Provisional
Probab=99.73 E-value=3e-17 Score=168.07 Aligned_cols=139 Identities=18% Similarity=0.228 Sum_probs=106.5
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-----CCCCcceEEeeeeccCcCCCce-
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-----RHRNLIKIITVCSSIDFKGADF- 755 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-----~h~niv~l~~~~~~~~~~~~~~- 755 (997)
...+.||+|+||.||. +..++.+ +||++........+.+.+|+++++.+ .||||+++++++... .+.+.
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~--~g~g~v 79 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD--CGTGYV 79 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC--CCCeEE
Confidence 4467899999999995 5556655 69998765444567889999999999 579999999996542 12234
Q ss_pred EEEEEee--ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHH-HHHhhCCCCCcEecCCCCCCeeeCCC----Cc
Q 001908 756 KALVYEY--MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAI-EYLHHHCQPPIVHGDLKPSNVLLDHD----MV 828 (997)
Q Consensus 756 ~~lv~e~--~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L-~yLH~~~~~~ivHrDlk~~NIll~~~----~~ 828 (997)
..+|+|| +++|+|.+++.+.. ++.. ..++.|++.++ +|||++ +|+||||||+||+++.. +.
T Consensus 80 ~~~I~e~~G~~~~tL~~~l~~~~-------~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~ 147 (210)
T PRK10345 80 YDVIADFDGKPSITLTEFAEQCR-------YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVI 147 (210)
T ss_pred EEEEecCCCCcchhHHHHHHccc-------ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCc
Confidence 3378999 55799999997632 3333 34577888777 999999 99999999999999743 48
Q ss_pred EEEcccccc
Q 001908 829 AHVSDFGLA 837 (997)
Q Consensus 829 ~kl~DFg~a 837 (997)
++|+||+-+
T Consensus 148 ~~LiDg~G~ 156 (210)
T PRK10345 148 PVVCDNIGE 156 (210)
T ss_pred EEEEECCCC
Confidence 999995444
No 444
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.71 E-value=2.8e-18 Score=191.26 Aligned_cols=187 Identities=25% Similarity=0.302 Sum_probs=152.1
Q ss_pred cccccCcceEEEEE---ECCCCcEEEEEEecccch--hhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEEEE
Q 001908 686 MIGQGSFGSVYKGI---LGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 686 ~lg~G~~g~V~~~~---~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
.+|+|.||.|+.+. ..+.++.+|+|+.+.... ........|..++...+ ||.++++... ++.+...+++
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhya-----fqt~~kl~l~ 75 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYA-----FQTDGKLYLI 75 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeee-----eccccchhHh
Confidence 37999999998643 345678899998864321 11224566888888886 9999988765 6677889999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
.+|..+|++...+.+.. .++......+...++-|++++|.. +|+|||+|++||+++.+|++|+.|||.++.
T Consensus 76 ld~~rgg~lft~l~~~~------~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske 146 (612)
T KOG0603|consen 76 LDFLRGGDLFTRLSKEV------MFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKE 146 (612)
T ss_pred hhhcccchhhhccccCC------chHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhH
Confidence 99999999999988765 356667777888899999999999 999999999999999999999999999987
Q ss_pred cccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 840 LFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 840 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
.... ...+||..|||||++. ....++|.||||+++|||+||..||..
T Consensus 147 ~v~~------------~~~cgt~eymApEI~~--------------gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 147 AVKE------------KIACGTYEYRAPEIIN--------------GHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred hHhh------------hhcccchhhhhhHhhh--------------ccCCcccchhhhhhHHHHhhCCCCCch
Confidence 5221 1118999999998764 356789999999999999999999873
No 445
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.5e-16 Score=167.35 Aligned_cols=143 Identities=20% Similarity=0.166 Sum_probs=111.6
Q ss_pred hcCccCCcccccCcceEEEEE-ECCCCcEEEEEEecccchh------------------------hHHHHHHHHHHHhhc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGI-LGENGTFVAVKILNLMQKG------------------------ALKSFVAECEVLRNT 733 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~-~~~~~~~vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l 733 (997)
.-|++.+.||+|++|.||+|. ...+|+.||+|+++..... ....+.+|++.++++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 358889999999999999998 5568999999998743210 112356899999999
Q ss_pred CCC--CcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-
Q 001908 734 RHR--NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP- 810 (997)
Q Consensus 734 ~h~--niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~- 810 (997)
.+. .+.+++++ ...++||||++++++........ .........++.|++.++.|||.. +
T Consensus 108 ~~~~i~~p~~~~~---------~~~~lV~E~~~g~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---g~ 169 (237)
T smart00090 108 YEAGVPVPKPIAW---------RRNVLVMEFIGGDGLPAPRLKDV------EPEEEEEFELYDDILEEMRKLYKE---GE 169 (237)
T ss_pred HhcCCCCCeeeEe---------cCceEEEEEecCCcccccccccC------CcchHHHHHHHHHHHHHHHHHHhc---CC
Confidence 753 34444442 13489999999988876543322 244556788999999999999999 8
Q ss_pred cEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 811 IVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 811 ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
|+||||||+||+++ ++.++++|||.|...
T Consensus 170 iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 170 LVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 99999999999999 889999999998754
No 446
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.66 E-value=2.3e-16 Score=188.70 Aligned_cols=201 Identities=23% Similarity=0.286 Sum_probs=149.0
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC---CCCcceEEeeeecc
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR---HRNLIKIITVCSSI 748 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 748 (997)
.+.+...+.|.+.+.||+|+||.||+|.... |+.||+|+-+.....+ |.-=.+++.+++ -+-|..+...
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a---- 762 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSA---- 762 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHH----
Confidence 3445566789999999999999999999985 9999999986433221 111122333333 1222333222
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH--- 825 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~--- 825 (997)
+...+..++|+||.+.|+|.+++.... ..++.-++.++.|+++.++.||.. +|||+||||+|.++..
T Consensus 763 -~~~~~~S~lv~ey~~~Gtlld~~N~~~------~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~ 832 (974)
T KOG1166|consen 763 -HVFQNASVLVSEYSPYGTLLDLINTNK------VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREIC 832 (974)
T ss_pred -HccCCcceeeeeccccccHHHhhccCC------CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccC
Confidence 222446789999999999999999443 478889999999999999999999 9999999999999953
Q ss_pred ----CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHH
Q 001908 826 ----DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901 (997)
Q Consensus 826 ----~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ 901 (997)
...++|+|||.|-.+.. ........+.++|-.+-.+ |...|..++.++|.|.++.+++
T Consensus 833 ~~~~~~~l~lIDfG~siDm~l------fp~~~~F~~~~~td~f~C~------------EM~~grpWtYq~DyfGlAa~~h 894 (974)
T KOG1166|consen 833 ADSDSKGLYLIDFGRSIDMKL------FPDGTKFKAVWHTDLFDCI------------EMREGRPWTYQIDYFGLAATVH 894 (974)
T ss_pred CCCcccceEEEecccceeeeE------cCCCcEEeeeeccccchhH------------HHhcCCCCchhhhhHHHHHHHH
Confidence 34789999999876522 1122344455666666656 5556899999999999999999
Q ss_pred HHHhCCC
Q 001908 902 EMFTRRR 908 (997)
Q Consensus 902 elltg~~ 908 (997)
.|+.|++
T Consensus 895 ~mLFG~y 901 (974)
T KOG1166|consen 895 VMLFGKY 901 (974)
T ss_pred HHHHHHH
Confidence 9999865
No 447
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=4.1e-17 Score=178.67 Aligned_cols=202 Identities=26% Similarity=0.323 Sum_probs=134.6
Q ss_pred CccCCcccccCcceEEEEEECCC---CcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEe-------eeeccCc
Q 001908 681 FSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIIT-------VCSSIDF 750 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~-------~~~~~~~ 750 (997)
+.+.+..+..+++.++..+...+ ...++.|..+...........+++-.+....|-+..-+.. .......
T Consensus 246 ~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v 325 (516)
T KOG1033|consen 246 SSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADVDSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKV 325 (516)
T ss_pred ccccccccccccCCchhhhhcccchhhhhccchhhhccchhhhhhhhhhhhheeccccCCcccccCCCCchhhhcccccc
Confidence 34445566666666665544322 2334444433222122233344444444443333322222 0000001
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
....+.|+.|++|...+|.+|+..... ....++.....++.|++.|++| + +.+|||+||.||+...+..+|
T Consensus 326 ~~~~~lyI~Mn~c~~~tledWl~rr~~---~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 326 GKKVYLYIQMNLCEKETLEDWLRRRRT---GEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred ccccchhhhhhhhhhhhHHHHhhCCCc---ccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhh
Confidence 112358899999999999999986542 2346788999999999999999 6 899999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
|.|||+........ +............||..||+||.+ .+..|+.++||||+|++++|+++
T Consensus 397 IgDFgl~ts~~~~~--~~~~~~a~~t~~~gt~~YmsPEQi------------~g~~y~~kvdIyaLGlil~EL~~ 457 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDE--TVAPAAASHTQQVGTLLYMSPEQI------------RGQQYSEKVDIYALGLILAELLI 457 (516)
T ss_pred hhhhhheeecccCC--cccchhhhhhhcccccccCCHHHH------------hhhhhhhhcchhhHHHHHHHHHH
Confidence 99999987763322 112223345567899999999554 47889999999999999999998
No 448
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.63 E-value=3.1e-16 Score=183.09 Aligned_cols=216 Identities=24% Similarity=0.312 Sum_probs=145.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.+|..++.|..|+||.||.++++.+.+.+|+|+-+ .. .+++ ||..+.+ ....
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----------lilR-----nilt~a~-----------npfv 134 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----------LILR-----NILTFAG-----------NPFV 134 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccc-cc-----------hhhh-----ccccccC-----------Ccce
Confidence 57888999999999999999999999999995432 11 1111 1222221 1122
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
| ||-...++..+.. +. +.+.+++|+|+. +|+|||+||+|.+|+.-|++|+.|||+++
T Consensus 135 v------gDc~tllk~~g~l------Pv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk 191 (1205)
T KOG0606|consen 135 V------GDCATLLKNIGPL------PV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSK 191 (1205)
T ss_pred e------chhhhhcccCCCC------cc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhh
Confidence 2 3444444443311 11 237899999999 99999999999999999999999999988
Q ss_pred hcccCCCC-------CccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 839 FLFARPFD-------TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 839 ~~~~~~~~-------~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
........ ............+||+.|+||| ++....|+..+|+|++|+|+||.+.|..||.
T Consensus 192 ~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPe------------VilrqgygkpvdwwamGiIlyeFLVgcvpff 259 (1205)
T KOG0606|consen 192 KGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPE------------VILRQGYGKPVDWWAMGIILYEFLVGCVPFF 259 (1205)
T ss_pred hhhhhccchhhhcchHHHHHHhhhccccCCccccChh------------hhhhhccCCCccHHHHHHHHHHHheeeeecc
Confidence 75221000 0012223334568999999995 4556789999999999999999999999987
Q ss_pred cCcCCCccHHHHHHhhcchh--hhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 912 CMFQGGLTLHEFCKMALPEK--VMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
.. .-++.....+.+. +.+. |+ ..+.+..+++.+.++.+|.+|--..
T Consensus 260 Gd-----tpeelfg~visd~i~wpE~-de----------------a~p~Ea~dli~~LL~qnp~~Rlgt~ 307 (1205)
T KOG0606|consen 260 GD-----TPEELFGQVISDDIEWPEE-DE----------------ALPPEAQDLIEQLLRQNPLCRLGTG 307 (1205)
T ss_pred CC-----CHHHHHhhhhhhhcccccc-Cc----------------CCCHHHHHHHHHHHHhChHhhcccc
Confidence 43 2222222222111 1111 11 2245667889999999999998444
No 449
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.62 E-value=2.1e-15 Score=157.42 Aligned_cols=134 Identities=22% Similarity=0.345 Sum_probs=110.5
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccch--------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--------GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+.||+|++|.||+|.+ .+..|++|+...... .....+.+|++++..+.|+++.....++. .....
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~ 74 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFV-----DPENF 74 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEE-----eCCCC
Confidence 5799999999999998 678899998653211 12246788999999999998876666543 23467
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++|++|.+++.... . .+..++.+++.++.++|.. +++|+|++|+||+++ ++.++++|||.
T Consensus 75 ~lv~e~~~G~~L~~~~~~~~---------~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~ 140 (211)
T PRK14879 75 IIVMEYIEGEPLKDLINSNG---------M-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGL 140 (211)
T ss_pred EEEEEEeCCcCHHHHHHhcc---------H-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCc
Confidence 89999999999999986532 1 7788999999999999999 999999999999999 88999999998
Q ss_pred chh
Q 001908 837 ARF 839 (997)
Q Consensus 837 a~~ 839 (997)
+..
T Consensus 141 a~~ 143 (211)
T PRK14879 141 AEF 143 (211)
T ss_pred ccC
Confidence 863
No 450
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.62 E-value=2.8e-15 Score=154.54 Aligned_cols=141 Identities=23% Similarity=0.194 Sum_probs=109.7
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch----------------------hhHHHHHHHHHHHhh
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK----------------------GALKSFVAECEVLRN 732 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~----------------------~~~~~~~~E~~~l~~ 732 (997)
......|.+.+.||+|+||.||+|... +|+.||||+++.... .....+.+|+.++..
T Consensus 11 ~~~~~~~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 89 (198)
T cd05144 11 VKRGVVESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKA 89 (198)
T ss_pred HHcCchhhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHH
Confidence 333345888899999999999999886 799999998753210 011235778889999
Q ss_pred cCCCC--cceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC
Q 001908 733 TRHRN--LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP 810 (997)
Q Consensus 733 l~h~n--iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ 810 (997)
+.|++ +++.++. ...++||||+++++|.+.... .....++.+++.++.++|+. +
T Consensus 90 l~~~~i~v~~~~~~---------~~~~lv~e~~~g~~L~~~~~~------------~~~~~~~~~i~~~l~~lh~~---g 145 (198)
T cd05144 90 LYEEGFPVPKPIDW---------NRHAVVMEYIDGVELYRVRVL------------EDPEEVLDEILEEIVKAYKH---G 145 (198)
T ss_pred HHHcCCCCCceeec---------CCceEEEEEeCCcchhhcccc------------ccHHHHHHHHHHHHHHHHHC---C
Confidence 98774 4444432 245899999999998765431 13456889999999999998 9
Q ss_pred cEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 811 IVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 811 ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
|+||||||+||++++++.++|+|||.+...
T Consensus 146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 146 IIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred CCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 999999999999999999999999999654
No 451
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.60 E-value=2.9e-15 Score=178.08 Aligned_cols=144 Identities=23% Similarity=0.322 Sum_probs=111.9
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEec--ccc------hhhHHHHHHHHHHHhhcCCCCcceEE
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQ------KGALKSFVAECEVLRNTRHRNLIKII 742 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~------~~~~~~~~~E~~~l~~l~h~niv~l~ 742 (997)
+.........|...+.||+|+||+||+|.+. +..+++|+.. ... ....+.+.+|+++++.++|++++...
T Consensus 325 ~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~ 402 (535)
T PRK09605 325 WIKEEEVKRRKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPV 402 (535)
T ss_pred eccccccccccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeE
Confidence 3333334455677899999999999999985 3344444332 111 11235678999999999999998877
Q ss_pred eeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
.++.. ....++||||+++++|.+++. ....++.++++++.|||+. +++|||+||+||+
T Consensus 403 ~~~~~-----~~~~~lv~E~~~g~~L~~~l~--------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NIL 460 (535)
T PRK09605 403 IYDVD-----PEEKTIVMEYIGGKDLKDVLE--------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFI 460 (535)
T ss_pred EEEEe-----CCCCEEEEEecCCCcHHHHHH--------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEE
Confidence 66432 345789999999999999885 2456899999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchh
Q 001908 823 LDHDMVAHVSDFGLARF 839 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~ 839 (997)
+ .++.++|+|||+|+.
T Consensus 461 l-~~~~~~liDFGla~~ 476 (535)
T PRK09605 461 V-RDDRLYLIDFGLGKY 476 (535)
T ss_pred E-ECCcEEEEeCccccc
Confidence 9 678999999999974
No 452
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.59 E-value=4.5e-15 Score=153.36 Aligned_cols=130 Identities=24% Similarity=0.365 Sum_probs=103.7
Q ss_pred cccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 686 MIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.||+|+||.||+|.+ ++..|++|+..... ......+.+|+++++.++|+++.....++. ..+..+
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~-----~~~~~~ 73 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV-----DPDNKT 73 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE-----ECCCCE
Confidence 379999999999996 67889999864321 112356788999999998876554443322 233568
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++|++|.+++.... . .++.+++.++.++|+. +++|+|++|+||+++ ++.++++|||.+
T Consensus 74 lv~e~~~g~~l~~~~~~~~-------~------~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a 136 (199)
T TIGR03724 74 IVMEYIEGKPLKDVIEEGN-------D------ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLG 136 (199)
T ss_pred EEEEEECCccHHHHHhhcH-------H------HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCC
Confidence 9999999999999876532 0 6789999999999999 999999999999999 899999999988
Q ss_pred hh
Q 001908 838 RF 839 (997)
Q Consensus 838 ~~ 839 (997)
..
T Consensus 137 ~~ 138 (199)
T TIGR03724 137 KY 138 (199)
T ss_pred cC
Confidence 64
No 453
>PLN03150 hypothetical protein; Provisional
Probab=99.52 E-value=1e-14 Score=174.93 Aligned_cols=118 Identities=36% Similarity=0.588 Sum_probs=102.6
Q ss_pred ccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCC
Q 001908 492 NLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLS 571 (997)
Q Consensus 492 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 571 (997)
.++.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|..++.+++|+.|||++|+++|.+|..++++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCC--CcCCCCcceeecCCCCcCCCCCCCCCCCCC
Q 001908 572 YNHFDGEVPTK--GVFSNKTRVQLTGNGKLCGGSNELHLPSCP 612 (997)
Q Consensus 572 ~N~l~~~~p~~--~~~~~~~~~~~~~N~~~C~~~~~~~~~~c~ 612 (997)
+|+++|.+|.. ..+.....+.+.+|+.+|+.+. .+.|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~ 538 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACG 538 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCc
Confidence 99999999965 2233456789999999998533 46675
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.52 E-value=1.3e-15 Score=166.40 Aligned_cols=196 Identities=28% Similarity=0.440 Sum_probs=158.9
Q ss_pred CCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcE
Q 001908 367 GNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVS 446 (997)
Q Consensus 367 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 446 (997)
..+..-...||+.|++. .+|..+..+..|+.+.|+.|.+. .+|..++++..|++|||+.|+++ ..|..++.|+ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 34556667888999988 78888888889999999999998 78999999999999999999998 7888888877 899
Q ss_pred EecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcc
Q 001908 447 LNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNS 526 (997)
Q Consensus 447 L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (997)
|-+++|+++ .+|..++....+ ..||.+.|.+. .+|..++++.+|+.|.+..|++. .+|.+++ .-.|..||+|+|+
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl-~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~-~LpLi~lDfScNk 222 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTL-AHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC-SLPLIRLDFSCNK 222 (722)
T ss_pred EEEecCccc-cCCcccccchhH-HHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh-CCceeeeecccCc
Confidence 999999987 888888866666 77888888888 78888888888888888888887 7777777 4458888888888
Q ss_pred ccccCChhccccCcCCeeeCccccccccCchhccCC---CCCCEEeCCCC
Q 001908 527 FRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENL---SFLEYLNLSYN 573 (997)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~ls~N 573 (997)
++ .||..|.+|+.|++|-|.+|.|. ..|..++.. .-.++|+..-.
T Consensus 223 is-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 223 IS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQAC 270 (722)
T ss_pred ee-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhc
Confidence 88 78888888888888888888887 566655432 22355665555
No 455
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.51 E-value=6.4e-14 Score=143.20 Aligned_cols=135 Identities=25% Similarity=0.277 Sum_probs=97.0
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchh--hHHH----------------------HHHHHHHHhhcCCCC--
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG--ALKS----------------------FVAECEVLRNTRHRN-- 737 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~h~n-- 737 (997)
.+.||+|+||+||+|... +++.||||+++..... .... ...|.+.+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 468999999999999986 7999999998643211 1111 134566666664432
Q ss_pred cceEEeeeeccCcCCCceEEEEEeeccCCCHHHH-hhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecC
Q 001908 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEEW-LHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGD 815 (997)
Q Consensus 738 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrD 815 (997)
+.+.+++ ...++||||++++++... +.... .. .....++.+++.++.++|. . +|+|||
T Consensus 81 ~~~~~~~---------~~~~lv~e~~~g~~~~~~~l~~~~-------~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~D 140 (187)
T cd05119 81 VPKPIDL---------NRHVLVMEFIGGDGIPAPRLKDVR-------LL-EDPEELYDQILELMRKLYREA---GLVHGD 140 (187)
T ss_pred CCceEec---------CCCEEEEEEeCCCCccChhhhhhh-------hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCC
Confidence 4444432 135899999998543211 11111 01 4567889999999999999 7 999999
Q ss_pred CCCCCeeeCCCCcEEEcccccchhc
Q 001908 816 LKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 816 lk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
|||+||+++ ++.++++|||.|...
T Consensus 141 l~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 141 LSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred CChhhEEEE-CCcEEEEECcccccc
Confidence 999999999 999999999999654
No 456
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.50 E-value=1.5e-13 Score=135.04 Aligned_cols=135 Identities=22% Similarity=0.276 Sum_probs=110.8
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC--CCcceEEeeeeccCcCCCceEEEEE
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH--RNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
+.+.||+|.++.||++... +..+++|+...... ...+.+|++.++.++| .++++++++. ...+..+++|
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~-----~~~~~~~~v~ 72 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASG-----ESDGWSYLLM 72 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEc-----CCCCccEEEE
Confidence 3578999999999999984 47899999864433 4678899999999976 5888888873 3346789999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
||++++.+..+ +......++.+++++++++|....++++|+|++|+||+++.++.++++|||.++.
T Consensus 73 e~~~g~~~~~~-------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 73 EWIEGETLDEV-------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EecCCeecccC-------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99988776543 3346677899999999999986444799999999999999999999999998864
No 457
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.50 E-value=8.8e-16 Score=167.81 Aligned_cols=177 Identities=29% Similarity=0.457 Sum_probs=164.1
Q ss_pred cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccc
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRF 471 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~ 471 (997)
.+.--...||+.|++. ++|..++.+..|+.+.|.+|.+. .+|..++++..|+.|||+.|+++ ..|..++.++- +.
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lpL--kv 147 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLPL--KV 147 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCcc--ee
Confidence 4555678899999999 89999999999999999999999 79999999999999999999998 89998888763 78
Q ss_pred cccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccc
Q 001908 472 LDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 472 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (997)
|-+++|+++ .+|..++.+..|..||.|.|.+. .+|..++++.+|+.|++..|++. .+|..+..| .|..||+|+|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCce
Confidence 999999999 89999999999999999999998 89999999999999999999999 788888866 589999999999
Q ss_pred cccCchhccCCCCCCEEeCCCCcCccc
Q 001908 552 SGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 552 ~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
+ .+|-.|.+|+.|++|-|.+|+|+.+
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLqSP 249 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQSP 249 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCCCC
Confidence 8 8999999999999999999999954
No 458
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.49 E-value=2.2e-13 Score=143.68 Aligned_cols=139 Identities=18% Similarity=0.144 Sum_probs=105.6
Q ss_pred CCccc-ccCcceEEEEEECCCCcEEEEEEeccc-------------chhhHHHHHHHHHHHhhcCCCCc--ceEEeeeec
Q 001908 684 SNMIG-QGSFGSVYKGILGENGTFVAVKILNLM-------------QKGALKSFVAECEVLRNTRHRNL--IKIITVCSS 747 (997)
Q Consensus 684 ~~~lg-~G~~g~V~~~~~~~~~~~vAvK~~~~~-------------~~~~~~~~~~E~~~l~~l~h~ni--v~l~~~~~~ 747 (997)
...|| .|+.|+||.+.. .+..+|||.+... .......+.+|++++.+++|+++ ++.+++...
T Consensus 36 ~~~lg~~~g~gtv~~v~~--~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~ 113 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQT--PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVV 113 (239)
T ss_pred CceeecCCCCccEEEEEe--CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeee
Confidence 45687 899999999988 4778999988521 11233567889999999998875 666766432
Q ss_pred cCcCCCceEEEEEeeccC-CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC
Q 001908 748 IDFKGADFKALVYEYMQN-GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 826 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~ 826 (997)
.. ......++|||++++ .+|.+++.... ++.. .+.+++.++.+||+. ||+||||||+|||++.+
T Consensus 114 ~~-~~~~~~~lV~e~l~G~~~L~~~l~~~~-------l~~~----~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~ 178 (239)
T PRK01723 114 RH-GLFYRADILIERIEGARDLVALLQEAP-------LSEE----QWQAIGQLIARFHDA---GVYHADLNAHNILLDPD 178 (239)
T ss_pred ec-CcceeeeEEEEecCCCCCHHHHHhcCC-------CCHH----HHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCC
Confidence 11 112234699999997 69999886532 3332 356899999999999 99999999999999999
Q ss_pred CcEEEcccccchh
Q 001908 827 MVAHVSDFGLARF 839 (997)
Q Consensus 827 ~~~kl~DFg~a~~ 839 (997)
+.++++|||.++.
T Consensus 179 ~~v~LIDfg~~~~ 191 (239)
T PRK01723 179 GKFWLIDFDRGEL 191 (239)
T ss_pred CCEEEEECCCccc
Confidence 9999999998864
No 459
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.45 E-value=1.1e-14 Score=172.07 Aligned_cols=258 Identities=21% Similarity=0.275 Sum_probs=183.6
Q ss_pred hcCccCCcccccCcceEEEEEEC-CCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-ENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 754 (997)
..|.+.+.||+|+|+.|-.+... .....+|+|.+.... .........|..+-+.+. |+|++++++. ....+
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~-----~~~~~ 94 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEP-----SSSPR 94 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCc-----cCCCc
Confidence 46777888999999999987763 344567777765332 333445566777777776 9999999998 55667
Q ss_pred eEEEEEeeccCCCHHHHhh-cCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-hCCCCCcEecCCCCCCeeeCCCC-cEEE
Q 001908 755 FKALVYEYMQNGSLEEWLH-QSNGQPEVCDLSLIQRLNIAIDMASAIEYLH-HHCQPPIVHGDLKPSNVLLDHDM-VAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~-~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH-~~~~~~ivHrDlk~~NIll~~~~-~~kl 831 (997)
..++++||.+++++.+-+. ... ...+......+..|+..++.|+| +. +++|||+||+|.+++..+ ..|+
T Consensus 95 ~~~~~~~~s~g~~~f~~i~~~~~-----~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~ 166 (601)
T KOG0590|consen 95 SYLLSLSYSDGGSLFSKISHPDS-----TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKI 166 (601)
T ss_pred ccccccCcccccccccccccCCc-----cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccC
Confidence 8999999999999998883 322 12344456678899999999999 77 999999999999999999 9999
Q ss_pred cccccchhcccCCCCCccccccccccccc-cccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKG-TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~g-t~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
+|||+|...... ..........+| ++.|+|||..... .-..+..|+||.|+++.-+++|..|+
T Consensus 167 ~df~~At~~~~~-----~g~~~~~~~~~g~s~~y~a~E~~~~~-----------~~~~~~~d~~S~g~~l~~~~~g~~p~ 230 (601)
T KOG0590|consen 167 ADFGLATAYRNK-----NGAERSLKDRCGSSPPYGAPEHLSGK-----------AYRGPSVDVWSLGIVLSAMLTGELPW 230 (601)
T ss_pred CCchhhcccccc-----CCcceeeecccCCCCCCCCcccccch-----------hhcCCCcccccccccccccccCCCCc
Confidence 999999876331 123344555678 9999999765421 33467889999999999999999998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
............|.... +......|. .......++..+++..+|..|.+.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~---------~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 231 DFPSRKDGRYSSWKSNK---------GRFTQLPWN---------SISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred cccccccccceeecccc---------cccccCccc---------cCChhhhhcccccccCCchhccccccccc
Confidence 85544333222221111 000000011 11223457778888899999999887643
No 460
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.40 E-value=2.2e-13 Score=156.71 Aligned_cols=181 Identities=33% Similarity=0.496 Sum_probs=100.3
Q ss_pred ccccceeccccccccccchhhhcCCC-CCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccc
Q 001908 393 LRNLQAIGLSSNFLQGNIPSSLGNLT-LMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRF 471 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~ 471 (997)
++.++.|++.+|.++ .+|.....+. +|+.|++++|++. .+|..+..+++|+.|++++|++. .+|......+.+ +.
T Consensus 115 ~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L-~~ 190 (394)
T COG4886 115 LTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNL-NN 190 (394)
T ss_pred ccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhh-hh
Confidence 344455555555554 3444444442 5555555555554 34444455555555555555554 444433344444 45
Q ss_pred cccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccc
Q 001908 472 LDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 472 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 551 (997)
|++++|+++ .+|.....+..|++|++++|++. .++..+..+.++..+.+++|++. .++..++.++.++.|++++|++
T Consensus 191 L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i 267 (394)
T COG4886 191 LDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQI 267 (394)
T ss_pred eeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceeccccccc
Confidence 555555555 44444444455666666666443 45556666666666666666665 3356666666677777777777
Q ss_pred cccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 552 SGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 552 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
+ .++. +..+.+++.|++++|.++..+|..
T Consensus 268 ~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~ 296 (394)
T COG4886 268 S-SISS-LGSLTNLRELDLSGNSLSNALPLI 296 (394)
T ss_pred c-cccc-ccccCccCEEeccCccccccchhh
Confidence 6 3333 666777777777777776665543
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.39 E-value=2.8e-13 Score=155.86 Aligned_cols=186 Identities=38% Similarity=0.563 Sum_probs=147.4
Q ss_pred CCCCCCCCEEeccCCCCCCCCCCCccccc-ccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCC
Q 001908 366 IGNLVNLNLLGIEFNQLTGNIPREIGQLR-NLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNL 444 (997)
Q Consensus 366 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 444 (997)
+..++.++.|++.+|+++ .+|.....+. +|+.|++++|++. .+|..++.+++|+.|++++|+++ .+|...+.+++|
T Consensus 112 ~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L 188 (394)
T COG4886 112 LLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNL 188 (394)
T ss_pred hhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhh
Confidence 344467888888888888 5666666664 8888888888888 67777888888888888888888 577666678888
Q ss_pred cEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccC
Q 001908 445 VSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQG 524 (997)
Q Consensus 445 ~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (997)
+.|++++|++. .+|........+ +.|++++|++. ..+..+.++.++..|.+++|++. .++..++.++.++.|++++
T Consensus 189 ~~L~ls~N~i~-~l~~~~~~~~~L-~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~ 264 (394)
T COG4886 189 NNLDLSGNKIS-DLPPEIELLSAL-EELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSN 264 (394)
T ss_pred hheeccCCccc-cCchhhhhhhhh-hhhhhcCCcce-ecchhhhhcccccccccCCceee-eccchhccccccceecccc
Confidence 88888888887 777766555556 78888888654 56777888899999999999987 5578888889999999999
Q ss_pred ccccccCChhccccCcCCeeeCccccccccCchhcc
Q 001908 525 NSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLE 560 (997)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (997)
|+++ .++. ++.+.+|+.||+++|.++...|....
T Consensus 265 n~i~-~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 265 NQIS-SISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred cccc-cccc-ccccCccCEEeccCccccccchhhhc
Confidence 9998 4544 88899999999999999876665544
No 462
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.33 E-value=6.4e-12 Score=144.23 Aligned_cols=141 Identities=20% Similarity=0.235 Sum_probs=101.4
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhh----------------------------------------HHHH
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA----------------------------------------LKSF 723 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~~ 723 (997)
.+.||+|++|.||+|+.+ +|+.||||+.+...... .-++
T Consensus 122 ~~plasaSigQVh~A~l~-~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLV-DGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEec-CCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 368999999999999997 78999999986431110 0134
Q ss_pred HHHHHHHhhc----CCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHH-
Q 001908 724 VAECEVLRNT----RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS- 798 (997)
Q Consensus 724 ~~E~~~l~~l----~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~- 798 (997)
.+|++.+.++ +|.+-+.+-.++.+ .....++||||++|++|.++...... .. .+.+++.+++.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~----~~~~~vLvmE~i~G~~L~~~~~~~~~-----~~---~~~~ia~~~~~~ 268 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWD----RTSERVLTMEWIDGIPLSDIAALDEA-----GL---DRKALAENLARS 268 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehh----hcCCceEEEEeECCcccccHHHHHhc-----CC---CHHHHHHHHHHH
Confidence 5566666555 23333444444432 23357999999999999887654221 12 23456666666
Q ss_pred HHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 799 AIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 799 ~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
.+..+|.. |++|+|+||.||+++.+++++++|||++..+
T Consensus 269 ~l~ql~~~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l 307 (437)
T TIGR01982 269 FLNQVLRD---GFFHADLHPGNIFVLKDGKIIALDFGIVGRL 307 (437)
T ss_pred HHHHHHhC---CceeCCCCcccEEECCCCcEEEEeCCCeeEC
Confidence 46888988 9999999999999999999999999999765
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.33 E-value=2.1e-12 Score=132.81 Aligned_cols=208 Identities=22% Similarity=0.325 Sum_probs=142.1
Q ss_pred HHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCC
Q 001908 729 VLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQ 808 (997)
Q Consensus 729 ~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~ 808 (997)
-+-++.|.|+|++..|+.+..+.+.....+++|||..|++..++++... .+..+......+|+.||..||.|||+. .
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~--~~~a~~~~~wkkw~tqIlsal~yLhs~-~ 196 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKK--NQKALFQKAWKKWCTQILSALSYLHSC-D 196 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHH--hhhhhhHHHHHHHHHHHHhhhhhhhcc-C
Confidence 3445679999999999877766677789999999999999999997652 233466777889999999999999995 7
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccc--cccccccccccccccCCcchhcccccCccccCCCCC
Q 001908 809 PPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSME--TQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE 886 (997)
Q Consensus 809 ~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~--~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~ 886 (997)
|+|+|+++.-+-|++..+|-+|+.--...... .... .........+-++|.|| |+.....
T Consensus 197 PpiihgnlTc~tifiq~ngLIkig~~ap~s~h------~s~~~~~~~Ek~~~~~~~g~~a~------------~sg~~tn 258 (458)
T KOG1266|consen 197 PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTH------PSVNSTREAEKSVNTSLPGFSAP------------ESGTTTN 258 (458)
T ss_pred CccccCCcchhheeecCCceEEecccCccccc------hhhhhhhHhhhhccccCCccccC------------CcCcccc
Confidence 89999999999999999999998632211111 1000 01111223467789999 4444455
Q ss_pred CCccchhHHHHHHHHHHHhCCCC-CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHh
Q 001908 887 ASVTGDVYSLGVMLLEMFTRRRP-TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGV 965 (997)
Q Consensus 887 ~~~~~DvwSlGvvl~elltg~~P-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~ 965 (997)
.+.++|||+||++..||..+..- .+.. .....+. .....+ . ..+++. =.+.+.
T Consensus 259 ~~~a~dIy~fgmcAlemailEiq~tnse---S~~~~ee-------~ia~~i----~-~len~l-----------qr~~i~ 312 (458)
T KOG1266|consen 259 TTGASDIYKFGMCALEMAILEIQSTNSE---SKVEVEE-------NIANVI----I-GLENGL-----------QRGSIT 312 (458)
T ss_pred cccchhhhhhhHHHHHHHHheeccCCCc---ceeehhh-------hhhhhe----e-eccCcc-----------ccCcCc
Confidence 66789999999999999987653 1110 0000110 000000 0 000000 025788
Q ss_pred hcCCCCCCCCCCHHHHHH
Q 001908 966 ACSMESPIERMEMRDVLA 983 (997)
Q Consensus 966 ~cl~~dP~~Rps~~evl~ 983 (997)
+|++..|..||+|++++.
T Consensus 313 kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 313 KCLEGEPNGRPDARLLLF 330 (458)
T ss_pred ccccCCCCCCcchhhhhc
Confidence 999999999999998854
No 464
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=3.5e-12 Score=143.39 Aligned_cols=253 Identities=23% Similarity=0.261 Sum_probs=177.6
Q ss_pred hcCccCCcccc--cCcceEEEEEE--CCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcC
Q 001908 679 NEFSSSNMIGQ--GSFGSVYKGIL--GENGTFVAVKILNL--MQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFK 751 (997)
Q Consensus 679 ~~~~~~~~lg~--G~~g~V~~~~~--~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~ 751 (997)
+.|.+.+.+|. |.+|.||.+.. +.++..+|+|.-+. ........=.+|......++ |++.++.... +.
T Consensus 114 ~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~-----~e 188 (524)
T KOG0601|consen 114 QRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPA-----WE 188 (524)
T ss_pred hhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcc-----cc
Confidence 35667788999 99999999998 88999999998542 22222233355666666664 9999986665 67
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHH----HHHHHhhCCCCCcEecCCCCCCeeeCCC-
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMAS----AIEYLHHHCQPPIVHGDLKPSNVLLDHD- 826 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~----~L~yLH~~~~~~ivHrDlk~~NIll~~~- 826 (997)
+.+..++-+|++ +.++.++.+..... ++....+.+..+... |+.++|.. .++|-|+||.||+...+
T Consensus 189 ~~~~lfiqtE~~-~~sl~~~~~~~~~~-----~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~ 259 (524)
T KOG0601|consen 189 GSGILFIQTELC-GESLQSYCHTPCNF-----LPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDW 259 (524)
T ss_pred cCCcceeeeccc-cchhHHhhhccccc-----CCchhhhhHHhhhhhcccccccccCCC---cccccccchhheeccccc
Confidence 778899999999 57888888875531 445566677777777 99999999 99999999999999999
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
..++++|||+...+....+... ........|...|++||.++ +-++.+.|+|++|.+..+..++
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~---~~~~~r~~~~~~Y~~ke~~~-------------~l~~~~~di~sl~ev~l~~~l~ 323 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSV---FKVSKRPEGDCIYAAKELLN-------------GLATFASDIFSLGEVILEAILG 323 (524)
T ss_pred ceeecCCcceeEEccCCccccc---eeeeecCCCCceEeChhhhc-------------cccchHhhhcchhhhhHhhHhh
Confidence 8999999999987754433222 12223336778899998875 5678899999999999999998
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... .| .+.+... +..++ .+.-..++...+..|+..+|..|++.+.+..
T Consensus 324 ~~~~~~g~~~-----~W--~~~r~~~---ip~e~------------~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 324 SHLPSVGKNS-----SW--SQLRQGY---IPLEF------------CEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred cccccCCCCC-----Cc--ccccccc---Cchhh------------hcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 7654322100 00 0000000 00000 0011223445788999999999999776643
No 465
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.24 E-value=3.1e-11 Score=139.80 Aligned_cols=145 Identities=17% Similarity=0.184 Sum_probs=96.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchh----------------------------------hH---
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG----------------------------------AL--- 720 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~----------------------------------~~--- 720 (997)
..+|+. +.||+|++|.||+|+.+++|+.||||+.++.... -.
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345776 7999999999999999877999999999743110 01
Q ss_pred ---HHHHHHHHHHhhc----CCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHh--hcCCCCCCcCCCCHHHHHH
Q 001908 721 ---KSFVAECEVLRNT----RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLN 791 (997)
Q Consensus 721 ---~~~~~E~~~l~~l----~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~~~~~~~~~ 791 (997)
-++.+|+..+.++ .+...+.+-.++.+ -....++||||++|+.+.++- ...+ .+.. .
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d----~st~~VLvmE~i~G~~l~d~~~l~~~g-------~d~~---~ 263 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWD----YCSETVMVMERMYGIPVSDVAALRAAG-------TDMK---L 263 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecc----cCCCceEEEeeecCccHHhHHHHHhcC-------CCHH---H
Confidence 1234455555444 24444444444422 234678999999999998752 2221 2211 1
Q ss_pred HHHHHHHH-HHHHhhCCCCCcEecCCCCCCeeeCCCC----cEEEcccccchhc
Q 001908 792 IAIDMASA-IEYLHHHCQPPIVHGDLKPSNVLLDHDM----VAHVSDFGLARFL 840 (997)
Q Consensus 792 i~~~i~~~-L~yLH~~~~~~ivHrDlk~~NIll~~~~----~~kl~DFg~a~~~ 840 (997)
++...+.. +..++.. |++|+|+||.||+++.++ ++++.|||++..+
T Consensus 264 la~~~v~~~~~Qif~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l 314 (537)
T PRK04750 264 LAERGVEVFFTQVFRD---GFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL 314 (537)
T ss_pred HHHHHHHHHHHHHHhC---CeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC
Confidence 22222222 2334456 999999999999999988 9999999998776
No 466
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.17 E-value=3.4e-12 Score=129.22 Aligned_cols=203 Identities=25% Similarity=0.252 Sum_probs=130.8
Q ss_pred CCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecC-cCCCCCCCCCCCCCCCcE
Q 001908 368 NLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN-HLQGNIPPSLGNCKNLVS 446 (997)
Q Consensus 368 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~ 446 (997)
-+.+|+.+.++.+.-..+ -+-...-+.|+++...+.-++ ..|. +-..+.+..+.-+.- -.+|..-..+.....|++
T Consensus 212 ~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~-~~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~Lte 288 (490)
T KOG1259|consen 212 AFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQ-DVPS-LLPETILADPSGSEPSTSNGSALVSADTWQELTE 288 (490)
T ss_pred Hhhhhheeeeeccchhhe-eceeecCchhheeeeeccccc-cccc-ccchhhhcCccCCCCCccCCceEEecchHhhhhh
Confidence 344555555554433211 111112355777777666555 2221 212222222221111 122333333444566888
Q ss_pred EecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcc
Q 001908 447 LNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNS 526 (997)
Q Consensus 447 L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 526 (997)
+|||+|.++ .+..+..-++.+ +.|++|+|.+.. +. .+..|++|+.||||+|.++ .+..+=..+-+.+.|.|++|.
T Consensus 289 lDLS~N~I~-~iDESvKL~Pki-r~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 289 LDLSGNLIT-QIDESVKLAPKL-RRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred ccccccchh-hhhhhhhhccce-eEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhh
Confidence 888888876 666666666776 888888888873 32 3777889999999999998 677777778889999999998
Q ss_pred ccccCChhccccCcCCeeeCccccccccC-chhccCCCCCCEEeCCCCcCcccCC
Q 001908 527 FRGSIPLSLRSLKSIKELDLSCNNLSGQI-PEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 527 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
|.. -..++.+-+|..||+++|+|.... -..+++++.|+++.|.+|++.+.+.
T Consensus 364 iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 364 IET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred Hhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 862 235777888999999999997422 2568899999999999999987554
No 467
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.15 E-value=6.2e-10 Score=126.25 Aligned_cols=170 Identities=17% Similarity=0.232 Sum_probs=126.5
Q ss_pred EEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCC
Q 001908 697 KGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSN 776 (997)
Q Consensus 697 ~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~ 776 (997)
.|..+.++.+|.|.+.+...........+-++.++.++||+|++++.. ++.++..|+|+|.+. -|..++++..
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t-----~e~~~~~ylvTErV~--Pl~~~lk~l~ 102 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDT-----TEEEGTLYLVTERVR--PLETVLKELG 102 (690)
T ss_pred ccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhh-----hcccCceEEEeeccc--cHHHHHHHhH
Confidence 567777899999998875555445667788889999999999999987 566778999999873 5777777643
Q ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccc
Q 001908 777 GQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSI 856 (997)
Q Consensus 777 ~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~ 856 (997)
...+-..++||+.||.|||..| +++|++|.-.-|+|++.|..||++|.++...... .....
T Consensus 103 ---------~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~--------~~~~~ 163 (690)
T KOG1243|consen 103 ---------KEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGF--------NAPAK 163 (690)
T ss_pred ---------HHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccC--------Ccccc
Confidence 2345567889999999999876 8999999999999999999999999988654110 00001
Q ss_pred cccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 857 GIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 857 ~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
...--..|..|+.... -....|.|-|||+++|++.|
T Consensus 164 ~~~~~~s~~~P~~~~~--------------s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 164 SLYLIESFDDPEEIDP--------------SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred cchhhhcccChhhcCc--------------cccchhhhhHHHHHHHHhCc
Confidence 1111223555643221 11356999999999999998
No 468
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.14 E-value=1.2e-10 Score=116.93 Aligned_cols=130 Identities=19% Similarity=0.171 Sum_probs=95.3
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCc-ceEEeeeeccCcCCCceEEEEEee
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL-IKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
.+.++.|.++.||+++. .++.|++|+...... ....+.+|+++++.+.+.++ .+++.+. ....++||||
T Consensus 3 ~~~l~~G~~~~vy~~~~--~~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~-------~~~~~lv~e~ 72 (170)
T cd05151 3 ISPLKGGMTNKNYRVEV--ANKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD-------PETGVLITEF 72 (170)
T ss_pred eeecCCcccCceEEEEE--CCeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe-------CCCCeEEEEe
Confidence 45789999999999987 478899999764332 12346789999998865554 4454431 1235799999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC--CCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC--QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~--~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
++|.++.+. . . ....++.+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.|.
T Consensus 73 i~G~~l~~~----~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 73 IEGSELLTE----D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred cCCCccccc----c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 999887643 0 0 11235678999999999982 11259999999999998 6789999999885
No 469
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.10 E-value=9.5e-10 Score=110.62 Aligned_cols=137 Identities=18% Similarity=0.175 Sum_probs=98.4
Q ss_pred CCcccccCcceEEEEEECC------CCcEEEEEEecccc------------h----------hhHHHH----HHHHHHHh
Q 001908 684 SNMIGQGSFGSVYKGILGE------NGTFVAVKILNLMQ------------K----------GALKSF----VAECEVLR 731 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~------~~~~vAvK~~~~~~------------~----------~~~~~~----~~E~~~l~ 731 (997)
...||.|.-+.||.|.... .+..+|||+.+... + ...+.+ .+|...|+
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 4679999999999998653 35789999885210 0 112223 38999999
Q ss_pred hcCC--CCcceEEeeeeccCcCCCceEEEEEeeccCCCHH-HHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHH-hhCC
Q 001908 732 NTRH--RNLIKIITVCSSIDFKGADFKALVYEYMQNGSLE-EWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYL-HHHC 807 (997)
Q Consensus 732 ~l~h--~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~-~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yL-H~~~ 807 (997)
++.. -++.+.+++ ...++||||+.+..+. ..++.. .++..+...+..+++.+|.++ |..
T Consensus 82 rl~~~Gv~vP~pi~~---------~~~~lvME~Ig~~~~~~~~Lkd~-------~~~~~~~~~i~~~i~~~l~~l~H~~- 144 (197)
T cd05146 82 RMQKAGIPCPEVVVL---------KKHVLVMSFIGDDQVPAPKLKDA-------KLNDEEMKNAYYQVLSMMKQLYKEC- 144 (197)
T ss_pred HHHHcCCCCCeEEEe---------cCCEEEEEEcCCCCccchhhhcc-------ccCHHHHHHHHHHHHHHHHHHHHhC-
Confidence 9853 466677654 2468999999664332 122221 134445667789999999999 777
Q ss_pred CCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 808 QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 808 ~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
+++|+|+++.||+++ ++.+.++|||.|...
T Consensus 145 --glVHGDLs~~NIL~~-~~~v~iIDF~qav~~ 174 (197)
T cd05146 145 --NLVHADLSEYNMLWH-DGKVWFIDVSQSVEP 174 (197)
T ss_pred --CeecCCCCHHHEEEE-CCcEEEEECCCceeC
Confidence 999999999999996 578999999988654
No 470
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.08 E-value=2.1e-11 Score=140.49 Aligned_cols=199 Identities=27% Similarity=0.330 Sum_probs=91.4
Q ss_pred CCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCC-CCCCCCC
Q 001908 366 IGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPS-LGNCKNL 444 (997)
Q Consensus 366 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L 444 (997)
+..+++|++|++++|+|+...+ +..++.|+.|++++|.|+. ...+..+++|+.+++++|++...-+ . ...+.++
T Consensus 114 l~~~~~L~~L~ls~N~I~~i~~--l~~l~~L~~L~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~-~~~~~~~~l 188 (414)
T KOG0531|consen 114 LSSLVNLQVLDLSFNKITKLEG--LSTLTLLKELNLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIEN-DELSELISL 188 (414)
T ss_pred hhhhhcchheeccccccccccc--hhhccchhhheeccCcchh--ccCCccchhhhcccCCcchhhhhhh-hhhhhccch
Confidence 3445555555555555553322 3344445566666666552 1334445556666666666553222 1 3455556
Q ss_pred cEEecCCCcccCCcccccccccccccccccCCCcccCCCcccccccc--ccceeccccccccccccccccCCcCccEEEc
Q 001908 445 VSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLK--NLVALYISGNQFSGEIPVTLTGCTGLEIFHM 522 (997)
Q Consensus 445 ~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 522 (997)
+.+++++|.+. ....+..+..+ ..+++..|.++..-+. ..+. .|+.+++++|++. .++..+..+..+..|++
T Consensus 189 ~~l~l~~n~i~--~i~~~~~~~~l-~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~ 262 (414)
T KOG0531|consen 189 EELDLGGNSIR--EIEGLDLLKKL-VLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDL 262 (414)
T ss_pred HHHhccCCchh--cccchHHHHHH-HHhhcccccceeccCc--ccchhHHHHHHhcccCccc-cccccccccccccccch
Confidence 66666666553 11122222222 3345555555422211 1111 2556666666655 33344445555555555
Q ss_pred cCccccccCChhccccCcCCeeeCccccccc---cCchh-ccCCCCCCEEeCCCCcCcc
Q 001908 523 QGNSFRGSIPLSLRSLKSIKELDLSCNNLSG---QIPEF-LENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 523 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~-~~~l~~L~~L~ls~N~l~~ 577 (997)
.+|++...- .+.....+..+.++.|.+.. ..... ....+.++.+.+.+|+...
T Consensus 263 ~~n~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 263 SSNRISNLE--GLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred hhccccccc--cccccchHHHhccCcchhcchhhhhccccccccccccccccccCcccc
Confidence 555554221 12333444455555555431 11111 3334445555555555444
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.06 E-value=3.3e-11 Score=138.82 Aligned_cols=215 Identities=30% Similarity=0.358 Sum_probs=153.1
Q ss_pred cccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeec
Q 001908 348 MTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSS 427 (997)
Q Consensus 348 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 427 (997)
++.+.+..|.|. .+-..+..+++|..|++..|+|.. +...+..+++|++|+|++|+|+.. ..+..++.|+.|++++
T Consensus 74 l~~l~l~~n~i~-~~~~~l~~~~~l~~l~l~~n~i~~-i~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~~ 149 (414)
T KOG0531|consen 74 LKELNLRQNLIA-KILNHLSKLKSLEALDLYDNKIEK-IENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLSG 149 (414)
T ss_pred HHhhccchhhhh-hhhcccccccceeeeeccccchhh-cccchhhhhcchheeccccccccc--cchhhccchhhheecc
Confidence 444445555554 233456778899999999999984 333377889999999999999854 3467778899999999
Q ss_pred CcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccc
Q 001908 428 NHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 428 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
|.|+. ...+..+++|+.+++++|++...-+.....+..+ +.+++++|.+.. ...+..+..+..+++..|.++-.-
T Consensus 150 N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l-~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~~ 224 (414)
T KOG0531|consen 150 NLISD--ISGLESLKSLKLLDLSYNRIVDIENDELSELISL-EELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKLE 224 (414)
T ss_pred Ccchh--ccCCccchhhhcccCCcchhhhhhhhhhhhccch-HHHhccCCchhc--ccchHHHHHHHHhhcccccceecc
Confidence 99983 3445668899999999999874433103556666 778899998863 334455666777788888887322
Q ss_pred cccccCCc--CccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCc
Q 001908 508 PVTLTGCT--GLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 508 p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 576 (997)
+ +..+. .|+.+++++|++. .++..+..++.+..||+++|++... ..+.....+..+.+..|.+.
T Consensus 225 ~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 225 G--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLA 290 (414)
T ss_pred C--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhc
Confidence 2 22223 3888899999887 4556777888888899998888743 33555666777778888776
No 472
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.04 E-value=4.1e-11 Score=128.14 Aligned_cols=160 Identities=22% Similarity=0.180 Sum_probs=86.2
Q ss_pred CCCccEEEecCCcCcCCCC--CCCCCCCCCcEEeccCccCCCccc--ccccccCccCeeEccCccCCCCCCCCcchhhhh
Q 001908 242 LPNLQVFAIGDNYFSGSIP--ESFSNASNIEIIDLPINYFTGKVS--IIFGRLKNLWSLDLGINNLGSGGANDLDFVTIL 317 (997)
Q Consensus 242 l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l 317 (997)
+.+|+...|.+..+. ..+ +....|++++.||||+|-|+...+ .....|++|+.|+|+.|++.....+...
T Consensus 120 ~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~----- 193 (505)
T KOG3207|consen 120 LKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTT----- 193 (505)
T ss_pred HHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccch-----
Confidence 344444455444443 222 345667777888888887765432 3456788888888888888765443222
Q ss_pred ccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC-CCccccccc
Q 001908 318 TNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP-REIGQLRNL 396 (997)
Q Consensus 318 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L 396 (997)
..++.|+.|.|+.|.++-.--.++....++++.|+|..|..-+........+..|+.|||++|++-...- ...+.++.|
T Consensus 194 ~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L 273 (505)
T KOG3207|consen 194 LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGL 273 (505)
T ss_pred hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccch
Confidence 2567788888888887732222222223455555555554322333333344455555555555542110 223444555
Q ss_pred ceecccccccc
Q 001908 397 QAIGLSSNFLQ 407 (997)
Q Consensus 397 ~~L~Ls~N~l~ 407 (997)
..|+++.+.+.
T Consensus 274 ~~Lnls~tgi~ 284 (505)
T KOG3207|consen 274 NQLNLSSTGIA 284 (505)
T ss_pred hhhhccccCcc
Confidence 55555555444
No 473
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.04 E-value=3.8e-12 Score=132.52 Aligned_cols=16 Identities=25% Similarity=0.480 Sum_probs=9.6
Q ss_pred CCCccceeeccCCCCC
Q 001908 216 NMSSLENILLDVNGFT 231 (997)
Q Consensus 216 ~l~~L~~L~L~~N~l~ 231 (997)
.+++|++|+|.+|.+.
T Consensus 118 s~~~L~eL~L~N~Glg 133 (382)
T KOG1909|consen 118 SCTDLEELYLNNCGLG 133 (382)
T ss_pred hccCHHHHhhhcCCCC
Confidence 3556666666666654
No 474
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.02 E-value=9.2e-12 Score=129.72 Aligned_cols=198 Identities=25% Similarity=0.301 Sum_probs=118.6
Q ss_pred CcEEEEeccCCCCCC----cccccccCccccccccccccccCC----CCCcc-------CCCCCCCeEEEccCCCccccC
Q 001908 74 QRVTELDLRHQNIGG----SLSPYVGNLSFLRYINLATNNFHG----EIPKE-------IGFLFRLETLMLANNSFSGKI 138 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g----~~~~~l~~l~~L~~L~Ls~N~l~g----~~p~~-------~~~l~~L~~L~Ls~N~l~g~i 138 (997)
..+++|+|++|.+.- .+.+.+.+.+.|+.-++|+- |+| .+|+. +-.+++|++||||+|.|.-.-
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~-ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g 108 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDM-FTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKG 108 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhh-hcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccc
Confidence 468999999999844 35677888899999999863 343 45643 445679999999999997544
Q ss_pred CccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcch--hhhhhccCccccccCCCcccC
Q 001908 139 PTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS--IIYLHVGENQFSGTVPPSLYN 216 (997)
Q Consensus 139 P~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~--~~~L~l~~N~l~g~ip~~l~~ 216 (997)
+..++.+- .++..|++|.|.+|.+. |..=+.+. +..|. .|+.- +.
T Consensus 109 ~~~l~~ll---------------------~s~~~L~eL~L~N~Glg---~~ag~~l~~al~~l~--~~kk~-------~~ 155 (382)
T KOG1909|consen 109 IRGLEELL---------------------SSCTDLEELYLNNCGLG---PEAGGRLGRALFELA--VNKKA-------AS 155 (382)
T ss_pred hHHHHHHH---------------------HhccCHHHHhhhcCCCC---hhHHHHHHHHHHHHH--HHhcc-------CC
Confidence 44433221 12445667777777664 21111121 12222 33322 23
Q ss_pred CCccceeeccCCCCCCCCCc----cccccCCCccEEEecCCcCcC----CCCCCCCCCCCCcEEeccCccCCCccc----
Q 001908 217 MSSLENILLDVNGFTGNLPL----DIGVTLPNLQVFAIGDNYFSG----SIPESFSNASNIEIIDLPINYFTGKVS---- 284 (997)
Q Consensus 217 l~~L~~L~L~~N~l~g~lp~----~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~---- 284 (997)
-+.|+++..++|++. .-+. ..+...+.|+.+.++.|.|.. .+-..|..+++|++|||.+|-|+....
T Consensus 156 ~~~Lrv~i~~rNrle-n~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLE-NGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CcceEEEEeeccccc-cccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 356788888888775 2222 223455777788888777642 123456777777777777777764432
Q ss_pred ccccccCccCeeEccCccCCCC
Q 001908 285 IIFGRLKNLWSLDLGINNLGSG 306 (997)
Q Consensus 285 ~~~~~l~~L~~L~Ls~N~l~~~ 306 (997)
..++.+++|+.|+++++.++.-
T Consensus 235 kaL~s~~~L~El~l~dcll~~~ 256 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENE 256 (382)
T ss_pred HHhcccchheeecccccccccc
Confidence 2334444555555555555443
No 475
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=99.02 E-value=1.9e-10 Score=85.19 Aligned_cols=39 Identities=56% Similarity=1.039 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHhcC-CCCCCCCCCCCC--CCCCeeeeeeec
Q 001908 32 ETDRLALLAIKSQLH-DPLGVTNSWNNS--INLCQWAGVTCG 70 (997)
Q Consensus 32 ~~~~~aLl~~k~~~~-~~~~~~~sW~~~--~~~c~w~gv~C~ 70 (997)
++|++||++||+++. ||.+.+.+|+.+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 679999999999997 577899999876 799999999996
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=5.1e-11 Score=127.44 Aligned_cols=212 Identities=22% Similarity=0.202 Sum_probs=131.8
Q ss_pred CCCCCCCcEEeccCccCCCccc-ccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccc
Q 001908 263 FSNASNIEIIDLPINYFTGKVS-IIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSI 341 (997)
Q Consensus 263 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 341 (997)
=.++.+|+.+.|.+........ .....+++++.||||.|-+.... ........+++|+.|+|+.|++.-......
T Consensus 117 Qsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~----~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~ 192 (505)
T KOG3207|consen 117 QSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWF----PVLKIAEQLPSLENLNLSSNRLSNFISSNT 192 (505)
T ss_pred hhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHH----HHHHHHHhcccchhcccccccccCCccccc
Confidence 4577889999998888764433 45678899999999999887532 234556788999999999998873322211
Q ss_pred cccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC-CCCCcccccccceeccccccccccchhhhcCCCCC
Q 001908 342 ANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN-IPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLM 420 (997)
Q Consensus 342 ~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 420 (997)
.. .+++|+.|.|+.|.|+.. +-.....+++|+.|+|..|...+.-......+..|
T Consensus 193 ~~------------------------~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L 248 (505)
T KOG3207|consen 193 TL------------------------LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTL 248 (505)
T ss_pred hh------------------------hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHH
Confidence 11 345566666666666521 11223345666677776664333333444555666
Q ss_pred CeEEeecCcCCCCCC--CCCCCCCCCcEEecCCCcccCC-cccc-----cccccccccccccCCCcccCCCc--cccccc
Q 001908 421 TDLFLSSNHLQGNIP--PSLGNCKNLVSLNLSDNKLIGA-VPQQ-----ILTITTLSRFLDLGNNHLNGSLP--LEVGNL 490 (997)
Q Consensus 421 ~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~L~~N~l~~~-~p~~-----~~~l~~ll~~L~Ls~N~l~~~~p--~~~~~l 490 (997)
+.|||++|++.. .+ ...+.++.|..|+++.+.+... +|+. ...++++ ++|+++.|++. ..+ ..+..+
T Consensus 249 ~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL-~~L~i~~N~I~-~w~sl~~l~~l 325 (505)
T KOG3207|consen 249 QELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKL-EYLNISENNIR-DWRSLNHLRTL 325 (505)
T ss_pred hhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccc-eeeecccCccc-cccccchhhcc
Confidence 677777766652 33 3455666677777776666422 1221 1334555 77777777774 222 235567
Q ss_pred cccceeccccccccc
Q 001908 491 KNLVALYISGNQFSG 505 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~ 505 (997)
++|+.|....|.|+.
T Consensus 326 ~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 326 ENLKHLRITLNYLNK 340 (505)
T ss_pred chhhhhhcccccccc
Confidence 788888888998873
No 477
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.00 E-value=1.4e-10 Score=117.68 Aligned_cols=197 Identities=23% Similarity=0.221 Sum_probs=135.8
Q ss_pred cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC-CcccCCccccccccccccc
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD-NKLIGAVPQQILTITTLSR 470 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~ll~ 470 (997)
-+.+|+.+.+|...-. .+-.-...-+.|+++...+.-++. .|. +-..+.+.-..-+. ....|..-..+-..+.+ +
T Consensus 212 ~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~-~~~-l~pe~~~~D~~~~E~~t~~G~~~~~~dTWq~L-t 287 (490)
T KOG1259|consen 212 AFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQD-VPS-LLPETILADPSGSEPSTSNGSALVSADTWQEL-T 287 (490)
T ss_pred Hhhhhheeeeeccchh-heeceeecCchhheeeeecccccc-ccc-ccchhhhcCccCCCCCccCCceEEecchHhhh-h
Confidence 3455555555554332 121222233678888887776652 221 11112221111111 11233333344445556 8
Q ss_pred ccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccc
Q 001908 471 FLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNN 550 (997)
Q Consensus 471 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (997)
.+|||+|.|+ .+.+++.-++.++.|++|+|.+. .+- .+..+.+|+.||||+|.++ .+..+-..+-+.++|.|+.|.
T Consensus 288 elDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~-~v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~N~ 363 (490)
T KOG1259|consen 288 ELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIR-TVQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQNK 363 (490)
T ss_pred hccccccchh-hhhhhhhhccceeEEecccccee-eeh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhhhh
Confidence 8999999999 77788888999999999999998 443 3889999999999999998 666677788899999999999
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCccc--CCCCCcCCCCcceeecCCCC
Q 001908 551 LSGQIPEFLENLSFLEYLNLSYNHFDGE--VPTKGVFSNKTRVQLTGNGK 598 (997)
Q Consensus 551 l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~~~~~~~~~~~~~N~~ 598 (997)
|... ..+.++-+|..||+++|++... +-..+.++-+..+.+.+||.
T Consensus 364 iE~L--SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 364 IETL--SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred Hhhh--hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 9743 5678889999999999999742 33346778888899999986
No 478
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.97 E-value=3.8e-10 Score=127.15 Aligned_cols=247 Identities=19% Similarity=0.127 Sum_probs=165.3
Q ss_pred hhcCccCCcccccCcceEEEEEEC-CCCcEEEEEEecccchh--hHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-ENGTFVAVKILNLMQKG--ALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vAvK~~~~~~~~--~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
..+|..+..||.|.|+.|++...+ .++..|++|........ ....-..|+.+...+ .|.+++..+.. |...
T Consensus 264 ~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~-----W~~~ 338 (524)
T KOG0601|consen 264 LTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSS-----WSQL 338 (524)
T ss_pred cCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCC-----cccc
Confidence 457888999999999999998876 67788999977532221 112235566666666 47777776554 4455
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVS 832 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~ 832 (997)
+..|+--|||++++....+.... .++...++++..|++.++.++|+. .++|+|+||+||++..+ +..+++
T Consensus 339 r~~~ip~e~~~~~s~~l~~~~~~------~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~ 409 (524)
T KOG0601|consen 339 RQGYIPLEFCEGGSSSLRSVTSQ------MLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLG 409 (524)
T ss_pred ccccCchhhhcCcchhhhhHHHH------hcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhcc
Confidence 67789999999998877764322 256677889999999999999998 99999999999999886 788999
Q ss_pred ccccchhcccCCCCCcccccccccccccccccc-CCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYV-PPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~-aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
|||.++.+.- ........-.++ .+|++. ....+..++|++|||.-+.|.+++.+--.
T Consensus 410 ~~~~~t~~~~-----------~~~~~~~~~r~~p~~~~~~-----------e~~~~~~~~~~~sl~~~~~e~~~~~~ls~ 467 (524)
T KOG0601|consen 410 DFGCWTRLAF-----------SSGVFHHIDRLYPIAEILL-----------EDYPHLSKADIFSLGLSVDEAITGSPLSE 467 (524)
T ss_pred ccccccccce-----------ecccccccccccccchhhc-----------cccccccccccccccccccccccCcccCc
Confidence 9999864310 111112223333 244333 23556789999999999999999865322
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.. .. ... +....-+.. .....++..+.+.+...++..||.+.+......
T Consensus 468 ~~-~~---~~~---------i~~~~~p~~-------------~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 468 SG-VQ---SLT---------IRSGDTPNL-------------PGLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred cc-cc---cee---------eecccccCC-------------CchHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 11 00 000 000000000 011134456777888899999998877655443
No 479
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.96 E-value=2.1e-08 Score=107.15 Aligned_cols=282 Identities=16% Similarity=0.111 Sum_probs=167.6
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeec--cCcCCCceEEE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSS--IDFKGADFKAL 758 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~--~~~~~~~~~~l 758 (997)
...+.||+|+.+.+|-.-. -+. .+.|+...-.... -.+.++.|... .||-+..-+.|=.. +..+......+
T Consensus 14 ~~gr~LgqGgea~ly~l~e--~~d-~VAKIYh~Pppa~---~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGf 87 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGE--VRD-QVAKIYHAPPPAA---QAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGF 87 (637)
T ss_pred CCCccccCCccceeeecch--hhc-hhheeecCCCchH---HHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEE
Confidence 4578899999999996432 122 3457775332211 11233344433 56644331222000 00112223567
Q ss_pred EEeeccCC-CHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 759 VYEYMQNG-SLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 759 v~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+|..+++. -...++...........++|...++.++.++.+.+-||+. |.+-+|+.++|+|+++++.|.+.|-..-
T Consensus 88 lmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~---Gh~vGDVn~~~~lVsd~~~V~LVdsDsf 164 (637)
T COG4248 88 LMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEH---GHVVGDVNQNSFLVSDDSKVVLVDSDSF 164 (637)
T ss_pred ecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhc---CCcccccCccceeeecCceEEEEcccce
Confidence 77777553 2333333333223345689999999999999999999999 9999999999999999999999986654
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-CCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR-RRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg-~~P~~~~~~~ 916 (997)
... ..+....-.+|...|.+||...- -.+.+...+...|-|.+||++|+++.| +.||......
T Consensus 165 qi~---------~ng~~~~cpVg~~eftPPElQ~~-------~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~ 228 (637)
T COG4248 165 QIN---------ANGTLHLCPVGVSEFTPPELQTL-------PSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI 228 (637)
T ss_pred eec---------cCCceEecccCccccCCHHHhcc-------ccccccCCCccccchhHHHHHHHHHhcCCCCCCccccc
Confidence 432 12223334578899999986541 123355567788999999999999986 9998754321
Q ss_pred C---ccHH-HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCC--CCCCCCCHHHHHHHHHHHHH
Q 001908 917 G---LTLH-EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME--SPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 917 ~---~~~~-~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~--dP~~Rps~~evl~~L~~~~~ 990 (997)
+ ...+ ......+.+ ..|... + +.......-..-.++++.-+..+|+.. .+.-|||++..+..|.++.+
T Consensus 229 ~~ap~p~E~~Ia~g~f~y----a~~~~~-g-~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~ 302 (637)
T COG4248 229 SDAPNPLETDIAHGRFAY----ASDQRR-G-LKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQ 302 (637)
T ss_pred CCCCCcchhhhhcceeee----chhccC-C-CCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHH
Confidence 1 1111 111100000 000000 0 000000000112244555666688765 35689999999999999988
Q ss_pred Hhhc
Q 001908 991 TLVG 994 (997)
Q Consensus 991 ~~~~ 994 (997)
++.+
T Consensus 303 ~L~~ 306 (637)
T COG4248 303 QLKK 306 (637)
T ss_pred hhhh
Confidence 7754
No 480
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.96 E-value=4.3e-10 Score=110.79 Aligned_cols=78 Identities=24% Similarity=0.274 Sum_probs=25.2
Q ss_pred ccccceeccccccccccccccc-cCCcCccEEEccCccccccCC-hhccccCcCCeeeCccccccccCc----hhccCCC
Q 001908 490 LKNLVALYISGNQFSGEIPVTL-TGCTGLEIFHMQGNSFRGSIP-LSLRSLKSIKELDLSCNNLSGQIP----EFLENLS 563 (997)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~ 563 (997)
+++|+.|++++|+|+ .++..+ ..+++|+.|+|++|+|...-- ..+..+++|+.|+|.+|.++.. + ..+..+|
T Consensus 63 L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~-~~YR~~vi~~lP 140 (175)
T PF14580_consen 63 LPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK-KNYRLFVIYKLP 140 (175)
T ss_dssp -TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS-TTHHHHHHHH-T
T ss_pred hhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccch-hhHHHHHHHHcC
Confidence 444555555555554 232222 234555555555555542211 2344555666666666665522 2 1345566
Q ss_pred CCCEEe
Q 001908 564 FLEYLN 569 (997)
Q Consensus 564 ~L~~L~ 569 (997)
+|+.||
T Consensus 141 ~Lk~LD 146 (175)
T PF14580_consen 141 SLKVLD 146 (175)
T ss_dssp T-SEET
T ss_pred hhheeC
Confidence 666665
No 481
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.96 E-value=6.1e-10 Score=109.76 Aligned_cols=112 Identities=23% Similarity=0.327 Sum_probs=42.1
Q ss_pred ccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCcc
Q 001908 214 LYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNL 293 (997)
Q Consensus 214 l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 293 (997)
+.+..++++|+|++|+|+ .|. .++..+.+|+.|+|++|.|+. ++ .+..+++|++|++++|+|+...+.....+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 344556777788888776 443 444457788888888888874 33 47788899999999999987644333568899
Q ss_pred CeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccC
Q 001908 294 WSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLG 334 (997)
Q Consensus 294 ~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 334 (997)
++|+|++|+|..... ...+..+++|++|+|.+|.+.
T Consensus 91 ~~L~L~~N~I~~l~~-----l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 91 QELYLSNNKISDLNE-----LEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -EEE-TTS---SCCC-----CGGGGG-TT--EEE-TT-GGG
T ss_pred CEEECcCCcCCChHH-----hHHHHcCCCcceeeccCCccc
Confidence 999999999987543 355778889999999998876
No 482
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.88 E-value=1.9e-08 Score=97.21 Aligned_cols=129 Identities=26% Similarity=0.354 Sum_probs=94.6
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEeccc--------chhhHHHHHHHHHHHhhcCCCC--cceEEeeeeccCcCCCc
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLM--------QKGALKSFVAECEVLRNTRHRN--LIKIITVCSSIDFKGAD 754 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--------~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~ 754 (997)
..+++|+-+.+|.+.+ -|.++++|.-.+. ..-....-.+|+.+++++.--. +..++++ +++
T Consensus 2 ~~i~~GAEa~i~~~~~--~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv-------D~~ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDF--LGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV-------DPD 72 (204)
T ss_pred chhhCCcceeEEeeec--cCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE-------cCC
Confidence 4578999999999988 4555777754211 1112345678999998875433 3334433 355
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
...++|||++|..|.+.+.... ..++..|-.-+.-||.. +|+|+|+.++||++..+. +.++||
T Consensus 73 ~~~I~me~I~G~~lkd~l~~~~-------------~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDf 135 (204)
T COG3642 73 NGLIVMEYIEGELLKDALEEAR-------------PDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDF 135 (204)
T ss_pred CCEEEEEEeCChhHHHHHHhcc-------------hHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEEC
Confidence 7789999999999998887641 23455666677789999 999999999999997665 999999
Q ss_pred ccchh
Q 001908 835 GLARF 839 (997)
Q Consensus 835 g~a~~ 839 (997)
|++..
T Consensus 136 GLg~~ 140 (204)
T COG3642 136 GLGEF 140 (204)
T ss_pred Ccccc
Confidence 99964
No 483
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.87 E-value=1.5e-08 Score=106.62 Aligned_cols=145 Identities=23% Similarity=0.288 Sum_probs=106.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccch-hhHHHHHHHHHHHhhcCC--CCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-GALKSFVAECEVLRNTRH--RNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.++.|.++.||+++.. +|+.+++|+...... .....+.+|+++++.+.+ ..+.+++.++.... ..+..++|||
T Consensus 4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~--~~~~~~~v~e 80 (223)
T cd05154 4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPS--VLGTPFYVME 80 (223)
T ss_pred eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCC--ccCCceEEEE
Confidence 56899999999999885 467899999764322 134577899999999975 34577777643211 1135689999
Q ss_pred eccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC----------------------------------
Q 001908 762 YMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC---------------------------------- 807 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~---------------------------------- 807 (997)
|++|+++.+.+... .++..+...++.++++++.+||+..
T Consensus 81 ~i~G~~l~~~~~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 81 RVDGRVLRDRLLRP-------ELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred EeCCEecCCCCCCC-------CCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 99998887755321 2556667777888888888887421
Q ss_pred -------------------CCCcEecCCCCCCeeeCC--CCcEEEcccccchh
Q 001908 808 -------------------QPPIVHGDLKPSNVLLDH--DMVAHVSDFGLARF 839 (997)
Q Consensus 808 -------------------~~~ivHrDlk~~NIll~~--~~~~kl~DFg~a~~ 839 (997)
...++|+|+++.||+++. ++.+.++||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 236899999999999998 67789999998753
No 484
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.85 E-value=2e-08 Score=96.32 Aligned_cols=142 Identities=24% Similarity=0.292 Sum_probs=101.0
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEeccc--------chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--------QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--------~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
....+-||+-+.|+++.+ .|+.+.||.-... ..-......+|+..+.++.--.|..-.-+ +.+..
T Consensus 11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~-----~~D~~ 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLI-----FIDTY 83 (229)
T ss_pred cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEE-----EEecC
Confidence 467889999999999999 6888888754211 12234566889999988753332222212 22233
Q ss_pred eEEEEEeeccC-CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEE
Q 001908 755 FKALVYEYMQN-GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAH 830 (997)
Q Consensus 755 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~k 830 (997)
.-.++|||++| .++.+++....... .........+.+|-+.+.-||.. +|+|+|+.++||++..++ .+.
T Consensus 84 ~~~i~ME~~~g~~~vk~~i~~~~~~~----~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~ 156 (229)
T KOG3087|consen 84 GGQIYMEFIDGASTVKDFILSTMEDE----SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPI 156 (229)
T ss_pred CCeEEEEeccchhHHHHHHHHHccCc----ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceE
Confidence 56799999976 48888888754221 22223367788888899999999 999999999999997666 468
Q ss_pred Ecccccch
Q 001908 831 VSDFGLAR 838 (997)
Q Consensus 831 l~DFg~a~ 838 (997)
++|||++.
T Consensus 157 lIdfgls~ 164 (229)
T KOG3087|consen 157 LIDFGLSS 164 (229)
T ss_pred EEeecchh
Confidence 99999985
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.79 E-value=6.1e-09 Score=127.84 Aligned_cols=277 Identities=22% Similarity=0.189 Sum_probs=143.5
Q ss_pred cccceeecccccccCcCcCccCcchhhhhhccCccc-cccCCC-cccCCCccceeeccCCCCCCCCCccccccCCCccEE
Q 001908 171 LKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQF-SGTVPP-SLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVF 248 (997)
Q Consensus 171 ~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l-~g~ip~-~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L 248 (997)
...+...+-+|.+. .++....+..+.+|.+..|.. ...++. .|..++.|..|||++|.=-+.+|..++ .|-+|++|
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~-~Li~LryL 600 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIG-ELVHLRYL 600 (889)
T ss_pred hheeEEEEeccchh-hccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHh-hhhhhhcc
Confidence 44555555566554 344444444455555566641 123333 355577777777777665567777776 67777777
Q ss_pred EecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEe
Q 001908 249 AIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAF 328 (997)
Q Consensus 249 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L 328 (997)
+|++..++ .+|..++++..|.+|++..+.-...++.....|.+|++|.+-.-... .+......+.++.+|+.+..
T Consensus 601 ~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~----~~~~~l~el~~Le~L~~ls~ 675 (889)
T KOG4658|consen 601 DLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALS----NDKLLLKELENLEHLENLSI 675 (889)
T ss_pred cccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccc----cchhhHHhhhcccchhhhee
Confidence 77777777 77777777777777777777665556666666777777777655421 11122334455555555555
Q ss_pred ecCccCC-CCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccccc------ccceecc
Q 001908 329 EENRLGG-VLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLR------NLQAIGL 401 (997)
Q Consensus 329 ~~N~l~~-~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~------~L~~L~L 401 (997)
....... .-......+.+..+.+.+..+... ..+..+..+.+|+.|.+.++.++........... ++..+..
T Consensus 676 ~~~s~~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~ 754 (889)
T KOG4658|consen 676 TISSVLLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSI 754 (889)
T ss_pred ecchhHhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHh
Confidence 3332200 000111111122223333222222 4455666677777777777766533222221111 1222211
Q ss_pred ccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC
Q 001908 402 SSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 402 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 456 (997)
.+...- ..+.+.--.++|+.|++........+.+....+..+..+.+..+.+.+
T Consensus 755 ~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 755 LNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred hccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccccc
Confidence 111111 123333344666666666666554444444445555555555555443
No 486
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.78 E-value=4.7e-09 Score=85.02 Aligned_cols=61 Identities=41% Similarity=0.564 Sum_probs=41.3
Q ss_pred CCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccC
Q 001908 243 PNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNL 303 (997)
Q Consensus 243 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l 303 (997)
|+|++|++++|+++...+.+|.++++|++|++++|+++...+..|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3566666666666655556677777777777777777766666777777777777766654
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.75 E-value=5.8e-09 Score=84.50 Aligned_cols=60 Identities=37% Similarity=0.538 Sum_probs=33.9
Q ss_pred CccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcC
Q 001908 516 GLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHF 575 (997)
Q Consensus 516 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 575 (997)
+|++|++++|+|+...+..|..+++|++|++++|+++...|..|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555544444555555555555555555555555555666666666665553
No 488
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.74 E-value=4e-09 Score=124.63 Aligned_cols=211 Identities=23% Similarity=0.303 Sum_probs=141.4
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..+.+.+.+-+-+|.++.++.+.-...|.-.+.|+..... ..+.+....+-.+.-..++|-++....- +...
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s-----~~~r 876 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS-----FPCR 876 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC-----CCCC
Confidence 3355666778888999999998887777666666543221 1111222222222222234444433322 3345
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...+++++|..+++|...++..... +..-.......+..+.+|||.. .+.|||++|.|.++..++..+++|
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~~~------saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~ 947 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSGCL------SAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTD 947 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCCCc------ccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCc
Confidence 6789999999999999999886632 2222233445678899999998 799999999999999999999999
Q ss_pred cccchhcccC----------------CCCCc-------cccccccccccccccccCCcchhcccccCccccCCCCCCCcc
Q 001908 834 FGLARFLFAR----------------PFDTS-------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVT 890 (997)
Q Consensus 834 Fg~a~~~~~~----------------~~~~~-------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~ 890 (997)
||........ ..... ...........||+.|.+||.. .+......
T Consensus 948 ~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~------------lg~~hgs~ 1015 (1205)
T KOG0606|consen 948 FGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEIL------------LGRRHGSA 1015 (1205)
T ss_pred cccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccc------------ccccCCCc
Confidence 9854433211 00000 0011224456799999999554 46777889
Q ss_pred chhHHHHHHHHHHHhCCCCCCcC
Q 001908 891 GDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 891 ~DvwSlGvvl~elltg~~P~~~~ 913 (997)
+|+|+.|++++|.++|.+||...
T Consensus 1016 ad~~~~g~~l~e~l~g~pp~na~ 1038 (1205)
T KOG0606|consen 1016 ADWWSSGVCLFEVLTGIPPFNAE 1038 (1205)
T ss_pred chhhhhhhhhhhhhcCCCCCCCc
Confidence 99999999999999999999854
No 489
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.73 E-value=3.5e-07 Score=100.86 Aligned_cols=178 Identities=19% Similarity=0.234 Sum_probs=133.0
Q ss_pred CcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEeeccC-CCHH
Q 001908 691 SFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEYMQN-GSLE 769 (997)
Q Consensus 691 ~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~-gsL~ 769 (997)
...+.|++....+|..|++|+++............-+++.+++.|.|+|++..++....| ++...++||+|+++ ++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF-~D~SlvlvYDYyP~s~TL~ 366 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTF-GDLSLVLVYDYYPSSPTLY 366 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhcc-CcceEEEEEecCCCCchHH
Confidence 346889999999999999999953322222233456888999999999999998764433 34568999999987 5888
Q ss_pred HHhhcCCCCC---------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 770 EWLHQSNGQP---------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 770 ~~l~~~~~~~---------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
+.--...... .....++..+|.++.|+..||.++|+. |...+-+.+.+|+++.+.+++|+..|....+
T Consensus 367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl 443 (655)
T KOG3741|consen 367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVL 443 (655)
T ss_pred HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeee
Confidence 7655433211 223467788999999999999999999 9999999999999999999999888776544
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
..++ .+| + .--.+-|.=.||.+++-+.||..-
T Consensus 444 ~~d~--------------------~~~--l---------------e~~Qq~D~~~lG~ll~aLAt~~~n 475 (655)
T KOG3741|consen 444 QEDP--------------------TEP--L---------------ESQQQNDLRDLGLLLLALATGTEN 475 (655)
T ss_pred cCCC--------------------Ccc--h---------------hHHhhhhHHHHHHHHHHHhhcccc
Confidence 2211 111 1 112356888999999999999654
No 490
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=2.5e-07 Score=98.72 Aligned_cols=146 Identities=14% Similarity=0.047 Sum_probs=100.3
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccchh-----------hHHHHHHHHHHHhhcCCCC--cceEEeeeeccCcC
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG-----------ALKSFVAECEVLRNTRHRN--LIKIITVCSSIDFK 751 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~ 751 (997)
+.+-+.....|++... .|+.|.||........ ....+.+|...+.++...+ +++.+++.......
T Consensus 28 e~v~~~~~rrvvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~ 105 (268)
T PRK15123 28 EVFRELEGRRTLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNP 105 (268)
T ss_pred cEEecCCCceEEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCC
Confidence 3344444445777776 6788999977432211 1124788999888874333 33444443221111
Q ss_pred CCceEEEEEeeccCC-CHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-----
Q 001908 752 GADFKALVYEYMQNG-SLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH----- 825 (997)
Q Consensus 752 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~----- 825 (997)
.....++|||++++. +|.+++..... .+.+...+..++.+++..+.-||.. ||+|+|++++|||++.
T Consensus 106 ~~~~s~LVte~l~~~~sL~~~~~~~~~----~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 106 ATRTSFIITEDLAPTISLEDYCADWAT----NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ccceeEEEEeeCCCCccHHHHHHhhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCC
Confidence 134578999999875 89999864321 1244566778999999999999999 9999999999999975
Q ss_pred --CCcEEEcccccchh
Q 001908 826 --DMVAHVSDFGLARF 839 (997)
Q Consensus 826 --~~~~kl~DFg~a~~ 839 (997)
++.+.++||+.++.
T Consensus 179 ~~~~~~~LIDl~r~~~ 194 (268)
T PRK15123 179 EEDLKLSVIDLHRAQI 194 (268)
T ss_pred CCCceEEEEECCcccc
Confidence 46899999998853
No 491
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.67 E-value=1.2e-07 Score=95.29 Aligned_cols=125 Identities=27% Similarity=0.246 Sum_probs=81.3
Q ss_pred eEEEEEECCCCcEEEEEEecccc--------------------------hhhHHHHHHHHHHHhhcCCC--CcceEEeee
Q 001908 694 SVYKGILGENGTFVAVKILNLMQ--------------------------KGALKSFVAECEVLRNTRHR--NLIKIITVC 745 (997)
Q Consensus 694 ~V~~~~~~~~~~~vAvK~~~~~~--------------------------~~~~~~~~~E~~~l~~l~h~--niv~l~~~~ 745 (997)
.||.|... +|.++|||+.+... ........+|.+.|.++... ++.+.+++.
T Consensus 1 ~Vy~~~~~-~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~ 79 (188)
T PF01163_consen 1 DVYHAIDP-DGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN 79 (188)
T ss_dssp EEEEEEEC-TTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE
T ss_pred CEEEEECC-CCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe
Confidence 48999885 78899999875210 00123568899999999755 567777651
Q ss_pred eccCcCCCceEEEEEeecc--CCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHH-HhhCCCCCcEecCCCCCCee
Q 001908 746 SSIDFKGADFKALVYEYMQ--NGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEY-LHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~y-LH~~~~~~ivHrDlk~~NIl 822 (997)
..++||||++ |..+....... ++......++.+++..+.. +|.. ||+|+|+.+.||+
T Consensus 80 ---------~~~ivME~I~~~G~~~~~l~~~~--------~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIl 139 (188)
T PF01163_consen 80 ---------RNVIVMEYIGEDGVPLPRLKDVD--------LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNIL 139 (188)
T ss_dssp ---------TTEEEEE--EETTEEGGCHHHCG--------GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEE
T ss_pred ---------CCEEEEEecCCCccchhhHHhcc--------ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEE
Confidence 3579999998 54444433221 1112345667788886666 4677 9999999999999
Q ss_pred eCCCCcEEEcccccchhc
Q 001908 823 LDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~ 840 (997)
++++ .+.++|||.|...
T Consensus 140 v~~~-~~~iIDf~qav~~ 156 (188)
T PF01163_consen 140 VDDG-KVYIIDFGQAVDS 156 (188)
T ss_dssp EETT-CEEE--GTTEEET
T ss_pred eecc-eEEEEecCcceec
Confidence 9887 9999999988643
No 492
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.67 E-value=1.2e-09 Score=123.22 Aligned_cols=180 Identities=25% Similarity=0.238 Sum_probs=114.8
Q ss_pred hhhhcCCCCCCeEEeecCcCCCCCCCCCCCC-CCCcEEecCCCccc----------CCcccccccccccccccccCCCcc
Q 001908 411 PSSLGNLTLMTDLFLSSNHLQGNIPPSLGNC-KNLVSLNLSDNKLI----------GAVPQQILTITTLSRFLDLGNNHL 479 (997)
Q Consensus 411 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~----------~~~p~~~~~l~~ll~~L~Ls~N~l 479 (997)
|-.+....+|++|.|.+..|.. -..+..+ ..|+.|.- +|.+. |.+-..+- ...| ...+.+.|++
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~--~~GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~-Wn~L-~~a~fsyN~L 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST--AKGLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPV-WNKL-ATASFSYNRL 176 (1096)
T ss_pred CceeccccceeeEEecCcchhh--hhhhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchh-hhhH-hhhhcchhhH
Confidence 5567778899999999998863 1111111 23444432 22221 11111111 1223 5567788888
Q ss_pred cCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhc
Q 001908 480 NGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFL 559 (997)
Q Consensus 480 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 559 (997)
. ....++.-++.|+.||||+|+++... .+..|+.|+.|||+.|.++-..--....++ |+.|.|++|.++.. ..+
T Consensus 177 ~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL--~gi 250 (1096)
T KOG1859|consen 177 V-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL--RGI 250 (1096)
T ss_pred H-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh--hhH
Confidence 7 56667777788888888888887332 677788888888888888733323444444 88888888888743 456
Q ss_pred cCCCCCCEEeCCCCcCcccCC--CCCcCCCCcceeecCCCCcCC
Q 001908 560 ENLSFLEYLNLSYNHFDGEVP--TKGVFSNKTRVQLTGNGKLCG 601 (997)
Q Consensus 560 ~~l~~L~~L~ls~N~l~~~~p--~~~~~~~~~~~~~~~N~~~C~ 601 (997)
.+|++|+.|||++|-|++.-- ..+.+..+..++++|||.-|.
T Consensus 251 e~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 251 ENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 778888888888888875322 224566778888888887773
No 493
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.59 E-value=3.6e-08 Score=121.20 Aligned_cols=227 Identities=21% Similarity=0.216 Sum_probs=109.4
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEee
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (997)
.|..|||++|.=-+.+|..+++|.+|++|+|++..++ .+|..+++|..|.+|++..+.-...+|.....|++|++|.+.
T Consensus 572 ~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~ 650 (889)
T KOG4658|consen 572 LLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLP 650 (889)
T ss_pred ceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEee
Confidence 3333444433333355566666666666666666666 566666666666666666665544555555556666666665
Q ss_pred cCcCC--CCCCCCCCCCCCCcEEecCCCcccCCcc---cccccccccccccccCCCcccCCCccccccccccceeccccc
Q 001908 427 SNHLQ--GNIPPSLGNCKNLVSLNLSDNKLIGAVP---QQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGN 501 (997)
Q Consensus 427 ~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 501 (997)
.-... ...-..+.++.+|+.+....... .+- .....+..+.+.+.+..+... ..+..+..+.+|+.|.+.+.
T Consensus 651 ~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~ 727 (889)
T KOG4658|consen 651 RSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDC 727 (889)
T ss_pred ccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcC
Confidence 54422 11222233444444444422221 011 111112222223333333322 34455666677777777776
Q ss_pred cccccccccccCCc------CccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcC
Q 001908 502 QFSGEIPVTLTGCT------GLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHF 575 (997)
Q Consensus 502 ~l~~~~p~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 575 (997)
.++........... ++..+...+...- ..+.+....++|+.|++.+......+.+....+..++.+-+..+.+
T Consensus 728 ~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~~f~~~ 806 (889)
T KOG4658|consen 728 GISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELILPFNKL 806 (889)
T ss_pred CCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEeccccc
Confidence 66532222211111 1111111111111 1222333446777777776666555555556666666655666666
Q ss_pred ccc
Q 001908 576 DGE 578 (997)
Q Consensus 576 ~~~ 578 (997)
.+.
T Consensus 807 ~~l 809 (889)
T KOG4658|consen 807 EGL 809 (889)
T ss_pred ccc
Confidence 554
No 494
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.58 E-value=2.6e-07 Score=94.79 Aligned_cols=134 Identities=26% Similarity=0.211 Sum_probs=97.8
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc--------------------c--hhhHHHHHHHHHHHhhcCCC--
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--------------------Q--KGALKSFVAECEVLRNTRHR-- 736 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--------------------~--~~~~~~~~~E~~~l~~l~h~-- 736 (997)
..++.+||.|.-|.||.|... .|.++|||.=+.. + .-.+..+.+|.++|+++.-.
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~ 171 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGV 171 (304)
T ss_pred HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCC
Confidence 456789999999999999997 7899999943210 0 11245678899999999755
Q ss_pred CcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 001908 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816 (997)
Q Consensus 737 niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 816 (997)
.+.+.+++ +..++||||++|-.|...-- +......++..|++-+.-.-.. ||||+|+
T Consensus 172 ~VP~P~~~---------nRHaVvMe~ieG~eL~~~r~-----------~~en~~~il~~il~~~~~~~~~---GiVHGDl 228 (304)
T COG0478 172 KVPKPIAW---------NRHAVVMEYIEGVELYRLRL-----------DVENPDEILDKILEEVRKAYRR---GIVHGDL 228 (304)
T ss_pred CCCCcccc---------ccceeeeehcccceeecccC-----------cccCHHHHHHHHHHHHHHHHHc---CccccCC
Confidence 67776665 36789999998865544221 1222334455555555555566 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccch
Q 001908 817 KPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~ 838 (997)
.+-||+++++|.+.++||-.+.
T Consensus 229 SefNIlV~~dg~~~vIDwPQ~v 250 (304)
T COG0478 229 SEFNILVTEDGDIVVIDWPQAV 250 (304)
T ss_pred chheEEEecCCCEEEEeCcccc
Confidence 9999999999999999997664
No 495
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=1.5e-06 Score=87.67 Aligned_cols=144 Identities=19% Similarity=0.144 Sum_probs=106.2
Q ss_pred ccccCcceEEEEEECCCCcEEEEEEeccc-----c-hhhHHHHHHHHHHHhhcCC--CCcceEEeeeeccCcCCCceEEE
Q 001908 687 IGQGSFGSVYKGILGENGTFVAVKILNLM-----Q-KGALKSFVAECEVLRNTRH--RNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 687 lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~-~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~l 758 (997)
-|+||.+-|++... .|+.+-+|.-... . +-....|.+|...++++.. -.+.+.+ ++............+
T Consensus 26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEE
Confidence 36799999999887 4557889977511 1 3345789999999998853 2345544 332211223455789
Q ss_pred EEeeccC-CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc--EEEcccc
Q 001908 759 VYEYMQN-GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--AHVSDFG 835 (997)
Q Consensus 759 v~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DFg 835 (997)
|+|-+++ .+|.+++.+... .+.+...+..+..+|++.+.-||.. |+.|+|+.+.||+++.++. ++++||.
T Consensus 103 VTe~L~g~~~L~~~l~~~~~----~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlE 175 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAV----SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLE 175 (216)
T ss_pred EEEeCCCCccHHHHHhcCCc----CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhh
Confidence 9998854 599999876431 1356677789999999999999999 9999999999999986676 9999998
Q ss_pred cchhc
Q 001908 836 LARFL 840 (997)
Q Consensus 836 ~a~~~ 840 (997)
-++..
T Consensus 176 k~r~~ 180 (216)
T PRK09902 176 KSRRR 180 (216)
T ss_pred ccchh
Confidence 77643
No 496
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.51 E-value=1.6e-09 Score=122.28 Aligned_cols=129 Identities=28% Similarity=0.360 Sum_probs=93.9
Q ss_pred CCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccc-cccCCcCccEEE
Q 001908 443 NLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPV-TLTGCTGLEIFH 521 (997)
Q Consensus 443 ~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 521 (997)
.|...+.+.|.+. .+...+.-++.+ ++|||++|+++..- .+..+++|+.|||++|.|. .+|. ...++. |+.|+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~al-e~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~ 238 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPAL-ESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLN 238 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHh-hhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeee
Confidence 4666777777776 555555555666 78888888887432 6778888899999999988 5554 344555 89999
Q ss_pred ccCccccccCChhccccCcCCeeeCccccccccCc-hhccCCCCCCEEeCCCCcCcccC
Q 001908 522 MQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIP-EFLENLSFLEYLNLSYNHFDGEV 579 (997)
Q Consensus 522 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~ 579 (997)
+++|.++.. ..+.+|++|+.|||++|-|++.-- ..+..|..|+.|+|.||++.+..
T Consensus 239 lrnN~l~tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 239 LRNNALTTL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred ecccHHHhh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 999988732 357788899999999998875322 33566778889999999987543
No 497
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.41 E-value=2.1e-08 Score=90.84 Aligned_cols=59 Identities=20% Similarity=0.330 Sum_probs=26.4
Q ss_pred ccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccccc
Q 001908 492 NLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 492 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
.++.|+|++|+|+ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|-.||..+|.+.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 3444444444444 34444444444444444444444 34444444444444444444443
No 498
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.37 E-value=3e-06 Score=87.63 Aligned_cols=110 Identities=27% Similarity=0.281 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHhhcC--CCCcceEEeeeeccCcCCCceEEEEEeeccCC-CHHHHhhcCCCCCCcCCCCHHHHHHHHHHH
Q 001908 720 LKSFVAECEVLRNTR--HRNLIKIITVCSSIDFKGADFKALVYEYMQNG-SLEEWLHQSNGQPEVCDLSLIQRLNIAIDM 796 (997)
Q Consensus 720 ~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i 796 (997)
...+.+|...+..+. .=.+++.+++..... ......++|+|++++. +|.+++..... .+......++.++
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~-~~~~~s~lite~l~~~~~L~~~~~~~~~------~~~~~~~~ll~~l 127 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRK-GGGYRSYLITEALPGAQDLRDLLQQWEQ------LDPSQRRELLRAL 127 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcC-CCceeEEEEEEeCCCcccHHHHHHhhcc------cchhhHHHHHHHH
Confidence 346778888877774 333555666543321 1124568999999874 89999987431 3445677899999
Q ss_pred HHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEEEcccccchh
Q 001908 797 ASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHVSDFGLARF 839 (997)
Q Consensus 797 ~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl~DFg~a~~ 839 (997)
++.++-||.. ||+|+|+++.|||++.++ .+.++||+.++.
T Consensus 128 ~~~i~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 128 ARLIAKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9999999999 999999999999999887 899999998764
No 499
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.32 E-value=4.1e-06 Score=96.88 Aligned_cols=138 Identities=19% Similarity=0.246 Sum_probs=94.5
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccchh------------------------------h----------HHHHH
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG------------------------------A----------LKSFV 724 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~------------------------------~----------~~~~~ 724 (997)
..|+.++-|.||+|+.+ +|+.||||+.++.-.. . +-++.
T Consensus 131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 78999999999999998 6999999988632100 0 11335
Q ss_pred HHHHHHhhc----CCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHh--hcCCCCCCcCCCCHHHHHHHHHHHHH
Q 001908 725 AECEVLRNT----RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWL--HQSNGQPEVCDLSLIQRLNIAIDMAS 798 (997)
Q Consensus 725 ~E~~~l~~l----~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l--~~~~~~~~~~~~~~~~~~~i~~~i~~ 798 (997)
+|+..+.++ +...-+++-.+| ++......++|||++|..+.+.. ++.+ .+. ..++..+++
T Consensus 210 ~EA~n~~~~~~nf~~~~~v~VP~V~----we~t~~~VLtmE~i~Gi~i~d~~~l~~~g-------~d~---k~ia~~~~~ 275 (517)
T COG0661 210 REAANAERFRENFKDDPDVYVPKVY----WEYTTRRVLTMEWIDGIKISDIAALKSAG-------IDR---KELAELLVR 275 (517)
T ss_pred HHHHHHHHHHHHcCCCCCeEeceee----hhccCCcEEEEEeeCCEecccHHHHHhcC-------CCH---HHHHHHHHH
Confidence 566656554 223333344444 33345679999999998888874 4432 442 334444444
Q ss_pred H-HHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 799 A-IEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 799 ~-L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
+ +..+-.. |+.|.|..|.||+++.+|++.+.|||+...+
T Consensus 276 ~f~~q~~~d---gffHaDpHpGNi~v~~~g~i~~lDfGi~g~l 315 (517)
T COG0661 276 AFLRQLLRD---GFFHADPHPGNILVRSDGRIVLLDFGIVGRL 315 (517)
T ss_pred HHHHHHHhc---CccccCCCccceEEecCCcEEEEcCcceecC
Confidence 4 2333344 8999999999999999999999999998765
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.27 E-value=6.8e-08 Score=87.63 Aligned_cols=41 Identities=17% Similarity=0.242 Sum_probs=15.7
Q ss_pred ccccccccceeccccccccccccccccCCcCccEEEccCccc
Q 001908 486 EVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSF 527 (997)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 527 (997)
++..++.|+.|+++.|.+. ..|..+..+.+|-.|+..+|.+
T Consensus 95 E~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~ 135 (177)
T KOG4579|consen 95 ELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENAR 135 (177)
T ss_pred HHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCcc
Confidence 3333333333333333333 3333333333333333333333
Done!