Query 001908
Match_columns 997
No_of_seqs 902 out of 6708
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:09:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001908.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001908hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 2.1E-83 7.2E-88 799.3 33.2 580 27-616 6-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 7.7E-64 2.6E-68 623.2 25.6 491 73-578 177-743 (768)
3 4eco_A Uncharacterized protein 100.0 1.5E-62 5E-67 597.7 23.4 524 31-602 28-629 (636)
4 1ziw_A TOLL-like receptor 3; i 100.0 1E-59 3.5E-64 580.7 35.7 538 62-603 4-626 (680)
5 4ecn_A Leucine-rich repeat pro 100.0 2E-59 6.7E-64 578.4 25.5 519 29-600 265-865 (876)
6 3t6q_A CD180 antigen; protein- 100.0 1.8E-57 6.1E-62 553.1 32.1 513 74-602 33-563 (606)
7 3j0a_A TOLL-like receptor 5; m 100.0 2.6E-57 9E-62 570.2 31.4 518 62-603 14-564 (844)
8 3t6q_A CD180 antigen; protein- 100.0 4.8E-57 1.7E-61 549.2 32.6 507 79-599 17-536 (606)
9 3vq2_A TLR4, TOLL-like recepto 100.0 8.7E-57 3E-61 547.0 28.6 524 60-603 5-562 (606)
10 1ziw_A TOLL-like receptor 3; i 100.0 2.9E-55 9.8E-60 541.0 38.6 499 75-581 74-627 (680)
11 3vq2_A TLR4, TOLL-like recepto 100.0 1.4E-55 4.6E-60 536.5 30.7 505 77-599 14-534 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 3.5E-53 1.2E-57 532.7 32.7 488 73-582 47-566 (844)
13 2z81_A CD282 antigen, TOLL-lik 100.0 2.9E-52 9.8E-57 501.0 21.3 486 61-581 3-515 (549)
14 2z63_A TOLL-like receptor 4, v 100.0 1E-50 3.4E-55 490.0 24.1 509 74-602 28-559 (570)
15 4eco_A Uncharacterized protein 100.0 1.5E-50 5E-55 492.2 24.9 514 30-602 24-603 (636)
16 2z63_A TOLL-like receptor 4, v 100.0 6.9E-50 2.4E-54 482.7 28.1 504 80-603 13-535 (570)
17 2z81_A CD282 antigen, TOLL-lik 100.0 5.6E-50 1.9E-54 481.1 27.0 490 68-602 3-513 (549)
18 4ecn_A Leucine-rich repeat pro 100.0 1.6E-50 5.3E-55 499.1 20.2 462 98-601 323-842 (876)
19 4asz_A BDNF/NT-3 growth factor 100.0 9.7E-51 3.3E-55 442.1 15.9 265 679-991 13-290 (299)
20 3omv_A RAF proto-oncogene seri 100.0 4.7E-50 1.6E-54 436.4 20.5 266 678-992 35-302 (307)
21 4aoj_A High affinity nerve gro 100.0 3.7E-50 1.3E-54 443.7 18.1 265 679-991 41-320 (329)
22 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-49 3.6E-54 475.2 22.1 463 77-581 3-486 (520)
23 4gt4_A Tyrosine-protein kinase 100.0 8.2E-50 2.8E-54 436.7 15.5 261 679-987 26-303 (308)
24 3fpq_A Serine/threonine-protei 100.0 1.1E-48 3.9E-53 422.4 21.5 252 681-983 28-282 (290)
25 2z7x_B TOLL-like receptor 1, v 100.0 1.3E-48 4.5E-53 465.8 20.9 453 101-602 3-484 (520)
26 3hmm_A TGF-beta receptor type- 100.0 4.1E-48 1.4E-52 424.6 22.8 282 679-992 3-299 (303)
27 4fih_A Serine/threonine-protei 100.0 1.4E-48 4.8E-53 429.9 19.1 250 679-983 74-323 (346)
28 4b9d_A Serine/threonine-protei 100.0 1.5E-48 5.3E-53 430.2 19.1 251 679-983 24-276 (350)
29 4g8a_A TOLL-like receptor 4; l 100.0 2E-47 6.7E-52 467.4 28.3 541 47-603 8-584 (635)
30 4g3f_A NF-kappa-beta-inducing 100.0 4.6E-48 1.6E-52 424.6 19.1 260 679-992 58-318 (336)
31 4ase_A Vascular endothelial gr 100.0 3.1E-48 1.1E-52 431.7 15.4 277 670-992 55-349 (353)
32 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.5E-48 2.9E-52 417.2 16.5 249 679-982 32-283 (311)
33 4fie_A Serine/threonine-protei 100.0 1.9E-47 6.6E-52 431.1 19.9 250 679-983 151-400 (423)
34 3hyh_A Carbon catabolite-derep 100.0 4.4E-47 1.5E-51 406.3 18.6 246 679-983 13-262 (275)
35 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.2E-47 3.2E-51 453.7 23.5 460 77-581 34-515 (562)
36 4g31_A Eukaryotic translation 100.0 8.2E-46 2.8E-50 404.1 18.7 263 679-983 5-279 (299)
37 3ubd_A Ribosomal protein S6 ki 100.0 8.9E-47 3E-51 409.5 10.3 243 679-978 24-271 (304)
38 1jl5_A Outer protein YOPM; leu 100.0 2.3E-45 7.7E-50 427.1 22.1 423 90-600 3-430 (454)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.5E-44 1.2E-48 431.2 25.9 451 100-602 33-513 (562)
40 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-44 5.2E-49 400.1 17.2 296 29-408 2-306 (313)
41 4b99_A Mitogen-activated prote 100.0 8.9E-44 3.1E-48 402.9 23.1 279 679-983 54-344 (398)
42 4g8a_A TOLL-like receptor 4; l 100.0 1.9E-43 6.3E-48 432.1 27.2 490 74-581 76-585 (635)
43 1jl5_A Outer protein YOPM; leu 100.0 3E-43 1E-47 409.2 26.0 412 74-563 11-440 (454)
44 4f9c_A Cell division cycle 7-r 100.0 3.7E-43 1.3E-47 393.7 18.7 209 675-913 17-250 (361)
45 3v47_A TOLL-like receptor 5B a 100.0 1.9E-42 6.5E-47 405.4 24.0 377 175-583 14-415 (455)
46 3v5w_A G-protein coupled recep 100.0 8.1E-43 2.8E-47 410.1 20.7 250 679-983 189-449 (689)
47 3v47_A TOLL-like receptor 5B a 100.0 5.5E-42 1.9E-46 401.5 24.1 395 60-532 6-412 (455)
48 3uto_A Twitchin; kinase, muscl 100.0 2.8E-41 9.4E-46 401.6 21.2 252 679-983 157-410 (573)
49 3ugc_A Tyrosine-protein kinase 100.0 5.5E-41 1.9E-45 369.0 13.8 283 678-994 9-295 (295)
50 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-39 4.2E-44 379.1 25.6 363 86-582 30-393 (457)
51 3soc_A Activin receptor type-2 100.0 2.9E-40 1E-44 367.8 19.2 287 678-991 23-319 (322)
52 3s95_A LIMK-1, LIM domain kina 100.0 6.4E-40 2.2E-44 363.2 21.5 269 678-995 9-287 (310)
53 2qkw_B Protein kinase; three-h 100.0 5E-40 1.7E-44 366.0 20.5 284 672-992 32-317 (321)
54 3bz5_A Internalin-J, INLJ; leu 100.0 5.7E-39 2E-43 373.5 29.0 354 74-513 42-396 (457)
55 3fxz_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 359.0 21.3 251 678-983 19-269 (297)
56 2id5_A Lingo-1, leucine rich r 100.0 9.3E-40 3.2E-44 384.8 22.4 348 221-604 14-361 (477)
57 3uim_A Brassinosteroid insensi 100.0 7.6E-40 2.6E-44 365.4 18.8 287 666-987 17-308 (326)
58 3q4u_A Activin receptor type-1 100.0 3.4E-39 1.2E-43 355.7 22.6 274 678-988 7-300 (301)
59 3fe3_A MAP/microtubule affinit 100.0 4.5E-39 1.5E-43 358.2 21.5 248 678-983 14-264 (328)
60 3kul_A Ephrin type-A receptor 100.0 7.1E-40 2.4E-44 365.0 14.9 263 678-992 48-315 (325)
61 2psq_A Fibroblast growth facto 100.0 2.1E-39 7.3E-44 367.5 18.8 266 678-991 80-365 (370)
62 3p86_A Serine/threonine-protei 100.0 5.6E-39 1.9E-43 354.9 21.3 263 676-992 34-300 (309)
63 2nru_A Interleukin-1 receptor- 100.0 2.1E-38 7.1E-43 350.6 25.8 284 665-990 11-306 (307)
64 2c30_A Serine/threonine-protei 100.0 8.7E-39 3E-43 355.5 22.6 262 667-983 23-294 (321)
65 4euu_A Serine/threonine-protei 100.0 1.4E-38 4.6E-43 354.1 23.4 288 679-988 9-307 (319)
66 3cbl_A C-FES, proto-oncogene t 100.0 4.9E-40 1.7E-44 374.2 11.9 262 677-991 112-375 (377)
67 3lb7_A RAF proto-oncogene seri 100.0 9.9E-39 3.4E-43 352.7 20.4 266 678-992 35-302 (307)
68 1o6v_A Internalin A; bacterial 100.0 8.6E-38 2.9E-42 366.5 29.3 169 370-553 221-389 (466)
69 3zgw_A Maternal embryonic leuc 100.0 8.9E-39 3E-43 357.8 19.4 252 677-984 8-261 (347)
70 1o6v_A Internalin A; bacterial 100.0 1.1E-37 3.7E-42 365.6 29.5 327 214-578 64-390 (466)
71 3vhe_A Vascular endothelial gr 100.0 3.2E-39 1.1E-43 365.6 15.8 278 669-992 12-357 (359)
72 4fr4_A YANK1, serine/threonine 100.0 2.1E-38 7.1E-43 359.0 21.9 253 678-982 14-270 (384)
73 2qol_A Ephrin receptor; recept 100.0 3.1E-39 1.1E-43 366.4 14.9 261 679-991 45-310 (373)
74 1o6l_A RAC-beta serine/threoni 100.0 8.4E-39 2.9E-43 357.0 18.0 249 678-983 4-260 (337)
75 4hcu_A Tyrosine-protein kinase 100.0 5.3E-39 1.8E-43 348.1 15.9 258 678-991 9-267 (269)
76 4eqm_A Protein kinase; transfe 100.0 1.5E-38 5.1E-43 349.2 19.3 262 678-990 10-275 (294)
77 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-39 1.2E-43 365.5 14.7 266 679-992 71-347 (367)
78 2yab_A Death-associated protei 100.0 3.7E-38 1.3E-42 355.0 21.7 252 678-983 11-272 (361)
79 3g2f_A Bone morphogenetic prot 100.0 6E-39 2E-43 359.8 15.1 294 678-994 12-322 (336)
80 3niz_A Rhodanese family protei 100.0 3.8E-38 1.3E-42 348.9 21.0 271 678-983 20-300 (311)
81 2pmi_A Negative RE, cyclin-dep 100.0 1.9E-38 6.5E-43 352.4 18.4 277 678-983 4-293 (317)
82 3tki_A Serine/threonine-protei 100.0 1.1E-38 3.7E-43 355.0 16.4 254 678-983 6-261 (323)
83 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-38 5.5E-43 370.0 17.9 254 678-991 192-446 (450)
84 3poz_A Epidermal growth factor 100.0 8.2E-39 2.8E-43 356.9 14.7 259 679-991 15-279 (327)
85 4aw2_A Serine/threonine-protei 100.0 3.1E-38 1.1E-42 363.6 19.6 267 672-983 67-338 (437)
86 1tki_A Titin; serine kinase, m 100.0 5E-38 1.7E-42 349.2 20.6 252 678-983 4-257 (321)
87 1luf_A Muscle-specific tyrosin 100.0 7.9E-39 2.7E-43 359.9 14.1 272 676-995 44-340 (343)
88 2y0a_A Death-associated protei 100.0 8.1E-38 2.8E-42 348.5 21.9 252 678-983 10-271 (326)
89 2izr_A Casein kinase I isoform 100.0 7.6E-38 2.6E-42 349.8 21.6 270 678-992 8-283 (330)
90 4dc2_A Protein kinase C IOTA t 100.0 2E-38 7E-43 360.2 17.2 249 678-978 51-307 (396)
91 3qup_A Tyrosine-protein kinase 100.0 9.9E-39 3.4E-43 355.9 14.3 272 677-991 21-299 (323)
92 3op5_A Serine/threonine-protei 100.0 3.3E-38 1.1E-42 357.6 18.5 282 677-993 33-332 (364)
93 3gen_A Tyrosine-protein kinase 100.0 2.1E-38 7E-43 346.2 16.2 259 677-991 22-281 (283)
94 2bdw_A Hypothetical protein K1 100.0 6.2E-38 2.1E-42 354.2 20.7 254 677-984 27-285 (362)
95 2w1i_A JAK2; chromosomal rearr 100.0 1.4E-38 4.9E-43 355.0 15.2 283 678-994 40-326 (326)
96 3soa_A Calcium/calmodulin-depe 100.0 8.7E-38 3E-42 361.3 22.2 255 676-983 8-267 (444)
97 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.1E-38 7.1E-43 353.4 16.4 246 679-983 9-258 (336)
98 4e5w_A Tyrosine-protein kinase 100.0 1.3E-38 4.3E-43 351.4 14.3 274 678-989 20-301 (302)
99 2zv2_A Calcium/calmodulin-depe 100.0 6E-38 2E-42 345.3 19.5 255 678-983 12-292 (298)
100 3sxs_A Cytoplasmic tyrosine-pr 100.0 9.8E-39 3.3E-43 345.8 13.0 258 678-991 7-265 (268)
101 3kfa_A Tyrosine-protein kinase 100.0 1.2E-38 4.2E-43 348.9 13.7 264 675-992 9-273 (288)
102 3mdy_A Bone morphogenetic prot 100.0 3.4E-37 1.2E-41 345.6 25.7 287 674-994 32-335 (337)
103 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-38 1.1E-42 354.6 17.3 250 677-983 21-280 (353)
104 2ivs_A Proto-oncogene tyrosine 100.0 2.4E-38 8.1E-43 351.3 15.6 267 677-991 21-312 (314)
105 3brb_A Proto-oncogene tyrosine 100.0 4.1E-38 1.4E-42 349.2 17.4 276 674-992 29-310 (313)
106 3c1x_A Hepatocyte growth facto 100.0 1.5E-38 5.1E-43 360.4 14.1 266 679-994 89-359 (373)
107 3lxl_A Tyrosine-protein kinase 100.0 1.4E-38 4.8E-43 355.3 13.6 271 679-991 23-304 (327)
108 3f3z_A Calcium/calmodulin-depe 100.0 6.5E-38 2.2E-42 341.1 18.4 261 677-992 7-272 (277)
109 3a8x_A Protein kinase C IOTA t 100.0 6.7E-38 2.3E-42 351.3 18.9 248 679-978 9-264 (345)
110 3qd2_B Eukaryotic translation 100.0 9.5E-38 3.3E-42 349.2 20.1 264 678-983 5-325 (332)
111 1mp8_A Focal adhesion kinase 1 100.0 2.4E-38 8.3E-43 345.3 14.8 261 677-992 13-278 (281)
112 4f0f_A Serine/threonine-protei 100.0 1.7E-37 5.7E-42 339.7 21.5 255 678-987 18-286 (287)
113 1t4h_A Serine/threonine-protei 100.0 1.9E-37 6.5E-42 339.9 21.8 252 679-983 26-282 (290)
114 1opk_A P150, C-ABL, proto-onco 100.0 1.6E-38 5.5E-43 374.2 14.1 258 678-989 219-477 (495)
115 3f66_A Hepatocyte growth facto 100.0 5E-38 1.7E-42 345.9 16.8 267 679-995 25-296 (298)
116 3rp9_A Mitogen-activated prote 100.0 1.4E-37 4.6E-42 363.9 21.4 208 678-906 52-280 (458)
117 3og7_A AKAP9-BRAF fusion prote 100.0 3.5E-38 1.2E-42 345.5 15.4 265 677-990 22-288 (289)
118 3c0i_A Peripheral plasma membr 100.0 9.2E-38 3.1E-42 351.8 19.2 256 678-983 23-286 (351)
119 3o0g_A Cell division protein k 100.0 7.4E-38 2.5E-42 343.5 18.0 272 679-983 2-282 (292)
120 1ob3_A PFPK5, cell division co 100.0 6E-38 2E-42 343.5 17.0 269 679-983 2-280 (288)
121 1t46_A HOMO sapiens V-KIT hard 100.0 4.9E-38 1.7E-42 348.6 16.5 272 677-995 21-312 (313)
122 3dtc_A Mitogen-activated prote 100.0 8.9E-38 3E-42 338.8 18.2 253 679-988 7-271 (271)
123 3v8s_A RHO-associated protein 100.0 5.2E-38 1.8E-42 358.9 16.9 263 672-983 62-329 (410)
124 1kob_A Twitchin; kinase, intra 100.0 1.4E-37 4.7E-42 353.5 20.3 253 678-983 50-304 (387)
125 3lxp_A Non-receptor tyrosine-p 100.0 3.6E-38 1.2E-42 350.4 15.1 274 680-994 32-314 (318)
126 1xjd_A Protein kinase C, theta 100.0 2E-38 6.7E-43 354.9 13.1 251 675-982 13-268 (345)
127 1fot_A TPK1 delta, CAMP-depend 100.0 1E-37 3.4E-42 345.7 18.6 246 678-983 5-258 (318)
128 1csn_A Casein kinase-1; phosph 100.0 2.6E-37 9E-42 340.1 21.8 272 678-993 9-286 (298)
129 3uc3_A Serine/threonine-protei 100.0 1.3E-37 4.6E-42 351.5 19.9 254 678-984 19-275 (361)
130 3g33_A Cell division protein k 100.0 1.2E-37 4.2E-42 344.5 18.9 276 677-983 7-296 (308)
131 3p1a_A MYT1 kinase, membrane-a 100.0 1.3E-37 4.5E-42 344.6 19.2 246 678-983 56-304 (311)
132 1qcf_A Haematopoetic cell kina 100.0 1.7E-38 5.7E-43 370.5 12.4 258 677-990 186-444 (454)
133 3tt0_A Basic fibroblast growth 100.0 3.7E-37 1.2E-41 351.2 23.2 267 678-992 68-354 (382)
134 2eva_A TAK1 kinase - TAB1 chim 100.0 1.8E-37 6.2E-42 342.8 19.9 257 679-992 8-265 (307)
135 3is5_A Calcium-dependent prote 100.0 1.4E-37 4.7E-42 340.0 18.7 254 678-983 21-278 (285)
136 4eut_A Serine/threonine-protei 100.0 1.1E-37 3.7E-42 357.3 18.6 292 678-991 8-310 (396)
137 2w4o_A Calcium/calmodulin-depe 100.0 1.4E-37 4.7E-42 349.9 19.1 252 677-983 51-305 (349)
138 3gni_B Strad alpha; kinase fol 100.0 1.6E-37 5.6E-42 355.4 20.0 282 678-983 24-333 (389)
139 1rdq_E PKA C-alpha, CAMP-depen 100.0 6E-38 2.1E-42 352.2 16.1 245 679-983 41-293 (350)
140 3oja_B Anopheles plasmodium-re 100.0 2.1E-37 7.1E-42 374.3 22.0 174 419-604 212-385 (597)
141 1u5q_A Serine/threonine protei 100.0 1.7E-37 5.7E-42 348.7 19.1 249 679-983 54-305 (348)
142 3ork_A Serine/threonine protei 100.0 9.4E-38 3.2E-42 345.9 16.9 266 678-989 11-280 (311)
143 1b6c_B TGF-B superfamily recep 100.0 5.5E-37 1.9E-41 344.7 23.1 286 671-993 34-339 (342)
144 1rjb_A FL cytokine receptor; k 100.0 7.3E-38 2.5E-42 352.2 15.8 272 676-994 42-338 (344)
145 4agu_A Cyclin-dependent kinase 100.0 1.1E-37 3.9E-42 345.3 17.0 271 679-983 3-284 (311)
146 1mqb_A Ephrin type-A receptor 100.0 9.3E-38 3.2E-42 349.3 16.4 262 679-992 44-311 (333)
147 3t9t_A Tyrosine-protein kinase 100.0 7.1E-38 2.4E-42 338.8 14.9 258 678-991 7-265 (267)
148 3oz6_A Mitogen-activated prote 100.0 4E-37 1.4E-41 351.9 21.8 212 676-912 6-233 (388)
149 2i1m_A Macrophage colony-stimu 100.0 5.5E-38 1.9E-42 351.5 14.3 275 673-994 40-330 (333)
150 3n9x_A Phosphotransferase; mal 100.0 3.4E-37 1.2E-41 357.0 21.1 213 678-911 25-253 (432)
151 4hgt_A Casein kinase I isoform 100.0 7E-37 2.4E-41 336.3 22.5 272 677-993 7-283 (296)
152 3kmu_A ILK, integrin-linked ki 100.0 2.2E-37 7.5E-42 335.6 18.1 258 678-990 9-270 (271)
153 2x4f_A Myosin light chain kina 100.0 2.5E-37 8.5E-42 350.6 19.2 248 683-983 93-342 (373)
154 2i0e_A Protein kinase C-beta I 100.0 2.4E-37 8.3E-42 347.2 18.9 250 677-983 18-276 (353)
155 2xir_A Vascular endothelial gr 100.0 7.6E-38 2.6E-42 347.5 14.6 277 670-992 18-312 (316)
156 3pls_A Macrophage-stimulating 100.0 2.8E-37 9.5E-42 339.9 19.0 266 680-994 22-291 (298)
157 3ttj_A Mitogen-activated prote 100.0 6E-37 2.1E-41 357.2 22.9 269 678-983 61-355 (464)
158 2vd5_A DMPK protein; serine/th 100.0 1.8E-37 6.3E-42 354.6 18.1 268 672-983 54-327 (412)
159 3gxj_A TGF-beta receptor type- 100.0 3.3E-39 1.1E-43 356.1 3.5 278 678-992 2-299 (303)
160 3kex_A Receptor tyrosine-prote 100.0 2.4E-38 8.2E-43 352.9 10.4 259 679-991 13-277 (325)
161 4fvq_A Tyrosine-protein kinase 100.0 1.5E-37 5.2E-42 340.4 16.5 254 678-990 7-275 (289)
162 3uzp_A CKI-delta, CKID, casein 100.0 1E-36 3.5E-41 335.1 23.0 271 678-993 8-283 (296)
163 3ll6_A Cyclin G-associated kin 100.0 2E-37 6.7E-42 347.4 17.6 274 678-992 27-310 (337)
164 3i6u_A CDS1, serine/threonine- 100.0 2.4E-37 8.4E-42 356.6 18.8 257 676-983 132-399 (419)
165 1xbb_A Tyrosine-protein kinase 100.0 7.5E-38 2.6E-42 343.2 13.7 263 678-994 15-283 (291)
166 3cc6_A Protein tyrosine kinase 100.0 1.3E-37 4.3E-42 339.6 15.4 260 677-991 10-274 (281)
167 3lzb_A Epidermal growth factor 100.0 7E-38 2.4E-42 349.2 13.6 260 679-992 15-280 (327)
168 1u59_A Tyrosine-protein kinase 100.0 1.7E-37 5.8E-42 339.7 16.1 263 679-994 9-276 (287)
169 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.7E-37 5.7E-42 346.7 16.3 272 677-983 32-318 (329)
170 2pvf_A Fibroblast growth facto 100.0 1.5E-37 5.3E-42 347.9 16.1 268 677-992 33-320 (334)
171 2wqm_A Serine/threonine-protei 100.0 6.2E-37 2.1E-41 339.2 20.7 266 678-992 31-299 (310)
172 3o6n_A APL1; leucine-rich repe 100.0 1.1E-36 3.8E-41 348.7 23.2 349 52-529 3-353 (390)
173 3kn6_A Ribosomal protein S6 ki 100.0 1.8E-37 6.2E-42 345.4 16.0 253 679-982 8-269 (325)
174 1nxk_A MAP kinase-activated pr 100.0 6.4E-37 2.2E-41 350.6 21.0 255 679-984 61-322 (400)
175 3qyz_A Mitogen-activated prote 100.0 3.5E-37 1.2E-41 349.2 18.4 278 678-983 26-313 (364)
176 3kk8_A Calcium/calmodulin depe 100.0 8.8E-37 3E-41 333.4 20.9 252 678-983 5-261 (284)
177 2j7t_A Serine/threonine-protei 100.0 3.7E-37 1.3E-41 339.6 18.1 258 678-983 18-275 (302)
178 2a2a_A Death-associated protei 100.0 9.6E-37 3.3E-41 339.4 21.6 252 678-983 11-272 (321)
179 2r5t_A Serine/threonine-protei 100.0 3E-37 1E-41 349.0 17.6 251 678-985 37-291 (373)
180 3fdn_A Serine/threonine-protei 100.0 2E-37 6.8E-42 337.7 15.6 249 677-984 7-258 (279)
181 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.3E-38 1.8E-42 365.9 11.7 259 677-991 182-441 (452)
182 2ozo_A Tyrosine-protein kinase 100.0 2.1E-37 7.2E-42 373.2 17.2 256 686-994 343-602 (613)
183 2id5_A Lingo-1, leucine rich r 100.0 6.9E-37 2.4E-41 360.3 21.3 345 200-581 17-361 (477)
184 3dls_A PAS domain-containing s 100.0 3.7E-37 1.2E-41 344.3 17.9 245 676-984 21-275 (335)
185 2y7j_A Phosphorylase B kinase 100.0 1.6E-36 5.4E-41 343.4 23.3 265 671-983 86-359 (365)
186 2eue_A Carbon catabolite derep 100.0 1.8E-37 6.3E-42 337.2 14.9 246 679-983 13-262 (275)
187 3mwu_A Calmodulin-domain prote 100.0 8.9E-37 3E-41 359.5 21.7 253 677-984 20-277 (486)
188 1p4o_A Insulin-like growth fac 100.0 5.1E-38 1.8E-42 349.9 10.5 271 673-991 19-300 (322)
189 2yex_A Serine/threonine-protei 100.0 6.7E-37 2.3E-41 332.8 18.9 255 677-983 5-261 (276)
190 2y94_A 5'-AMP-activated protei 100.0 7.4E-37 2.5E-41 355.6 20.5 247 679-983 16-266 (476)
191 3hko_A Calcium/calmodulin-depe 100.0 5.3E-37 1.8E-41 345.3 18.5 270 673-983 20-330 (345)
192 2buj_A Serine/threonine-protei 100.0 5.6E-37 1.9E-41 340.7 18.4 279 678-991 28-307 (317)
193 2v62_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42 347.6 15.7 276 678-989 36-327 (345)
194 3llt_A Serine/threonine kinase 100.0 1.1E-36 3.8E-41 344.7 21.0 209 667-912 23-261 (360)
195 1byg_A CSK, protein (C-termina 100.0 1.8E-37 6.1E-42 337.9 13.8 254 678-991 20-274 (278)
196 2ac3_A MAP kinase-interacting 100.0 8.2E-37 2.8E-41 339.2 19.4 278 679-983 12-295 (316)
197 2yfx_A Tyrosine-protein kinase 100.0 2.7E-37 9.3E-42 344.8 15.2 266 678-991 29-305 (327)
198 3a62_A Ribosomal protein S6 ki 100.0 1.1E-36 3.8E-41 339.5 20.1 249 678-983 16-276 (327)
199 4fl3_A Tyrosine-protein kinase 100.0 2.7E-37 9.1E-42 373.1 16.3 254 685-992 375-633 (635)
200 2acx_A G protein-coupled recep 100.0 8.6E-37 3E-41 359.4 20.1 254 678-983 183-444 (576)
201 3mtl_A Cell division protein k 100.0 1.7E-37 5.9E-42 345.7 13.4 271 679-983 2-281 (324)
202 1qpc_A LCK kinase; alpha beta 100.0 3.5E-37 1.2E-41 335.7 15.5 261 677-993 11-272 (279)
203 2a19_B Interferon-induced, dou 100.0 5.6E-37 1.9E-41 334.9 17.1 259 676-993 8-277 (284)
204 2w5a_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 339.3 11.8 259 678-986 5-270 (279)
205 2qr7_A Ribosomal protein S6 ki 100.0 3E-37 1E-41 345.6 15.2 253 677-983 20-277 (342)
206 2h34_A Serine/threonine-protei 100.0 9.9E-37 3.4E-41 337.3 19.2 262 677-991 32-297 (309)
207 3nsz_A CK II alpha, casein kin 100.0 1.3E-36 4.4E-41 339.9 20.0 267 679-983 36-319 (330)
208 4ejn_A RAC-alpha serine/threon 100.0 1.2E-37 4E-42 362.8 12.0 249 678-983 147-404 (446)
209 1ua2_A CAK, cell division prot 100.0 3.1E-37 1.1E-41 347.1 15.0 275 675-983 6-291 (346)
210 3lij_A Calcium/calmodulin depe 100.0 1.4E-36 4.6E-41 358.6 20.9 251 678-983 36-291 (494)
211 3mi9_A Cell division protein k 100.0 1.3E-36 4.6E-41 342.8 20.0 281 678-983 16-311 (351)
212 3cok_A Serine/threonine-protei 100.0 6.4E-37 2.2E-41 333.4 16.7 250 678-983 10-262 (278)
213 3nyv_A Calmodulin-domain prote 100.0 8E-37 2.7E-41 360.0 18.8 252 677-983 24-281 (484)
214 1x8b_A WEE1HU, WEE1-like prote 100.0 4.8E-37 1.6E-41 336.1 15.6 249 677-983 9-279 (289)
215 2ycf_A Serine/threonine-protei 100.0 1E-36 3.6E-41 339.3 18.4 257 676-983 7-274 (322)
216 1fvr_A Tyrosine-protein kinase 100.0 2.6E-37 8.9E-42 345.0 13.3 263 679-992 25-302 (327)
217 3fme_A Dual specificity mitoge 100.0 5.2E-37 1.8E-41 336.3 15.2 259 678-983 6-266 (290)
218 3bhy_A Death-associated protei 100.0 3.4E-36 1.1E-40 328.6 21.2 259 678-990 4-274 (283)
219 2jam_A Calcium/calmodulin-depe 100.0 2.5E-36 8.5E-41 333.4 20.3 252 677-983 7-261 (304)
220 3dbq_A Dual specificity protei 100.0 6.6E-37 2.3E-41 343.9 15.9 263 678-984 8-274 (343)
221 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.4E-36 4.9E-41 357.0 19.3 251 679-978 185-438 (543)
222 2b9h_A MAP kinase FUS3, mitoge 100.0 2.3E-36 7.8E-41 341.3 20.2 283 678-983 10-305 (353)
223 3o6n_A APL1; leucine-rich repe 100.0 2.9E-36 1E-40 345.2 21.2 335 216-602 43-377 (390)
224 3q5i_A Protein kinase; CDPK, m 100.0 2.8E-36 9.5E-41 356.8 21.6 252 677-983 34-301 (504)
225 3eqc_A Dual specificity mitoge 100.0 1.3E-36 4.5E-41 344.1 17.8 199 679-912 33-232 (360)
226 3an0_A Dual specificity mitoge 100.0 8.7E-37 3E-41 342.7 16.2 259 678-983 50-310 (340)
227 2jii_A Serine/threonine-protei 100.0 6.3E-37 2.2E-41 345.5 15.1 274 678-993 41-339 (352)
228 4fcg_A Uncharacterized protein 100.0 5.7E-37 1.9E-41 341.4 14.2 270 29-304 23-314 (328)
229 3a7i_A MST3 kinase, serine/thr 100.0 7.4E-37 2.5E-41 337.4 15.1 249 679-984 22-271 (303)
230 4aaa_A Cyclin-dependent kinase 100.0 1E-36 3.5E-41 340.7 16.4 271 679-983 25-306 (331)
231 1cm8_A Phosphorylated MAP kina 100.0 4.9E-36 1.7E-40 339.5 21.9 272 678-983 24-307 (367)
232 1phk_A Phosphorylase kinase; g 100.0 3.8E-36 1.3E-40 330.8 20.4 259 677-983 15-283 (298)
233 2x7f_A TRAF2 and NCK-interacti 100.0 1.3E-36 4.5E-41 339.2 16.9 269 671-983 16-286 (326)
234 2rku_A Serine/threonine-protei 100.0 9.4E-37 3.2E-41 335.0 15.4 250 678-984 14-266 (294)
235 2h8h_A Proto-oncogene tyrosine 100.0 1.9E-37 6.4E-42 368.4 10.3 258 677-990 265-523 (535)
236 1ogq_A PGIP-2, polygalacturona 100.0 7E-37 2.4E-41 338.6 14.2 254 347-603 51-308 (313)
237 2vgo_A Serine/threonine-protei 100.0 1.3E-36 4.4E-41 332.1 15.7 247 678-983 13-262 (284)
238 3lm5_A Serine/threonine-protei 100.0 2.5E-36 8.5E-41 336.9 18.2 266 666-983 15-287 (327)
239 2zmd_A Dual specificity protei 100.0 1.6E-36 5.5E-41 346.2 17.1 262 679-984 56-321 (390)
240 3sv0_A Casein kinase I-like; t 100.0 7E-36 2.4E-40 348.1 22.5 272 678-992 6-280 (483)
241 2i6l_A Mitogen-activated prote 100.0 7.2E-36 2.5E-40 332.1 21.6 278 678-983 10-305 (320)
242 2clq_A Mitogen-activated prote 100.0 3.3E-36 1.1E-40 330.8 18.4 255 680-983 23-278 (295)
243 2vwi_A Serine/threonine-protei 100.0 9.1E-37 3.1E-41 336.6 13.8 272 676-983 12-287 (303)
244 2owb_A Serine/threonine-protei 100.0 1.1E-36 3.7E-41 341.0 14.5 249 678-983 40-291 (335)
245 2xrw_A Mitogen-activated prote 100.0 1E-35 3.6E-40 337.8 22.4 269 678-983 24-318 (371)
246 2h6d_A 5'-AMP-activated protei 100.0 2.2E-36 7.4E-41 328.9 16.0 248 679-984 11-262 (276)
247 3pg1_A Mitogen-activated prote 100.0 5.5E-36 1.9E-40 339.3 19.7 282 670-983 13-316 (362)
248 3byv_A Rhoptry kinase; malaria 100.0 9.7E-38 3.3E-42 355.5 5.0 270 678-991 72-369 (377)
249 3eb0_A Putative uncharacterize 100.0 2.3E-36 8E-41 344.8 16.3 278 675-983 3-321 (383)
250 3e7e_A HBUB1, BUB1A, mitotic c 100.0 5.4E-36 1.9E-40 339.6 18.7 260 676-992 62-341 (365)
251 3pfq_A PKC-B, PKC-beta, protei 100.0 5.2E-36 1.8E-40 364.4 19.5 245 677-978 339-587 (674)
252 1u46_A ACK-1, activated CDC42 100.0 2.3E-36 8E-41 331.3 14.9 262 678-991 17-285 (291)
253 1vzo_A Ribosomal protein S6 ki 100.0 1.9E-36 6.7E-41 341.5 14.4 257 678-984 53-322 (355)
254 3com_A Serine/threonine-protei 100.0 1.2E-35 4E-40 329.6 20.2 252 677-983 27-278 (314)
255 2fst_X Mitogen-activated prote 100.0 3.2E-36 1.1E-40 340.6 15.9 272 678-983 28-311 (367)
256 3q60_A ROP5B; pseudokinase, tr 100.0 1.2E-36 4E-41 345.9 11.9 262 678-983 61-352 (371)
257 3kvw_A DYRK2, dual specificity 100.0 5.4E-36 1.9E-40 346.2 17.5 199 678-913 96-302 (429)
258 3rgf_A Cyclin-dependent kinase 100.0 6.3E-36 2.2E-40 344.0 17.8 210 679-913 20-239 (405)
259 2wei_A Calmodulin-domain prote 100.0 1.2E-35 4.3E-40 324.9 19.4 253 676-983 19-276 (287)
260 2r3i_A Cell division protein k 100.0 7.9E-36 2.7E-40 328.5 17.9 271 679-983 3-283 (299)
261 4e7w_A Glycogen synthase kinas 100.0 6.2E-36 2.1E-40 342.1 16.5 273 679-983 40-321 (394)
262 1wak_A Serine/threonine-protei 100.0 1.8E-35 6.3E-40 339.5 19.9 274 678-983 36-391 (397)
263 1zy4_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 328.1 16.9 266 677-983 4-283 (303)
264 2wtk_C Serine/threonine-protei 100.0 4.6E-35 1.6E-39 323.4 22.2 257 678-984 4-264 (305)
265 3e3p_A Protein kinase, putativ 100.0 2E-35 6.7E-40 334.6 19.3 284 672-983 16-314 (360)
266 1j1b_A Glycogen synthase kinas 100.0 5.5E-36 1.9E-40 345.4 14.5 274 679-983 54-336 (420)
267 2j0j_A Focal adhesion kinase 1 100.0 5.3E-36 1.8E-40 363.2 15.0 262 676-992 387-653 (656)
268 1blx_A Cyclin-dependent kinase 100.0 1.8E-35 6.1E-40 330.0 18.0 277 677-983 9-296 (326)
269 3oja_B Anopheles plasmodium-re 100.0 6.8E-35 2.3E-39 352.4 23.1 312 217-602 50-361 (597)
270 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-35 5.3E-40 333.7 15.6 266 678-983 30-322 (348)
271 4exu_A Mitogen-activated prote 100.0 7.5E-35 2.6E-39 330.7 20.5 271 678-983 41-323 (371)
272 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.7E-36 1.3E-40 334.4 9.4 277 672-992 26-304 (319)
273 2vx3_A Dual specificity tyrosi 100.0 5.3E-35 1.8E-39 333.5 19.1 202 677-913 52-261 (382)
274 2iwi_A Serine/threonine-protei 100.0 2.2E-35 7.5E-40 327.1 15.0 249 671-983 23-283 (312)
275 3fhr_A MAP kinase-activated pr 100.0 4.6E-35 1.6E-39 327.7 17.6 257 677-983 26-287 (336)
276 4fmz_A Internalin; leucine ric 100.0 5.8E-34 2E-38 320.7 26.2 318 201-576 29-346 (347)
277 1z57_A Dual specificity protei 100.0 5.5E-35 1.9E-39 327.7 17.7 268 678-983 13-328 (339)
278 3a99_A Proto-oncogene serine/t 100.0 3.3E-35 1.1E-39 326.7 15.5 244 676-983 40-293 (320)
279 3cek_A Dual specificity protei 100.0 1.7E-35 5.9E-40 328.1 12.9 268 673-984 22-293 (313)
280 2dyl_A Dual specificity mitoge 100.0 9.6E-35 3.3E-39 322.8 18.7 257 678-983 24-283 (318)
281 1q8y_A SR protein kinase; tran 100.0 7.2E-35 2.5E-39 331.6 16.5 274 678-983 18-333 (373)
282 3aln_A Dual specificity mitoge 100.0 5.1E-35 1.7E-39 326.4 14.3 263 678-983 21-285 (327)
283 4fmz_A Internalin; leucine ric 100.0 1.4E-33 4.8E-38 317.6 25.5 304 193-552 42-346 (347)
284 3coi_A Mitogen-activated prote 100.0 2.6E-34 8.8E-39 324.3 18.6 271 678-983 23-305 (353)
285 2eu9_A Dual specificity protei 100.0 7.1E-34 2.4E-38 321.0 21.6 268 678-983 18-333 (355)
286 3uqc_A Probable conserved tran 100.0 1.6E-34 5.3E-39 315.3 15.6 234 679-992 31-267 (286)
287 3qa8_A MGC80376 protein; kinas 100.0 6.4E-35 2.2E-39 346.4 11.9 281 678-989 13-308 (676)
288 2ft3_A Biglycan; proteoglycan, 100.0 2.8E-33 9.7E-38 312.9 24.3 289 218-574 33-331 (332)
289 2rio_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 331.1 17.8 264 680-983 16-295 (434)
290 3m2w_A MAP kinase-activated pr 100.0 2E-33 6.8E-38 309.3 20.1 235 679-983 17-256 (299)
291 2pzi_A Probable serine/threoni 100.0 1.1E-33 3.7E-38 346.6 18.0 247 679-991 80-329 (681)
292 1xku_A Decorin; proteoglycan, 100.0 1.2E-32 4E-37 307.6 24.7 292 218-574 31-330 (330)
293 3p23_A Serine/threonine-protei 100.0 1.5E-33 5.1E-38 325.4 17.2 254 678-983 23-283 (432)
294 2ft3_A Biglycan; proteoglycan, 100.0 3.7E-32 1.3E-36 303.9 23.4 276 218-550 54-331 (332)
295 3dzo_A Rhoptry kinase domain; 100.0 3.4E-33 1.2E-37 321.3 13.7 261 678-983 77-363 (413)
296 1z7x_W Ribonuclease inhibitor; 100.0 8E-36 2.7E-40 349.8 -9.7 377 218-599 3-440 (461)
297 1z7x_W Ribonuclease inhibitor; 100.0 1.1E-35 3.7E-40 348.6 -11.2 347 210-579 48-443 (461)
298 1xku_A Decorin; proteoglycan, 100.0 4.1E-31 1.4E-35 295.1 24.9 267 321-596 52-329 (330)
299 2vuw_A Serine/threonine-protei 100.0 1.4E-32 4.9E-37 307.7 10.7 247 678-982 19-329 (336)
300 3ogk_B Coronatine-insensitive 100.0 1.9E-33 6.6E-38 340.5 -11.1 477 31-573 16-548 (592)
301 3g06_A SSPH2 (leucine-rich rep 100.0 6.4E-30 2.2E-34 305.8 17.5 86 47-140 7-98 (622)
302 2z66_A Variable lymphocyte rec 100.0 2.2E-30 7.4E-35 286.0 12.2 272 325-602 11-290 (306)
303 2z66_A Variable lymphocyte rec 100.0 6.3E-30 2.1E-34 282.3 15.3 280 221-561 10-296 (306)
304 2z80_A TOLL-like receptor 2, v 100.0 4E-30 1.4E-34 289.9 13.1 233 347-581 77-319 (353)
305 3oja_A Leucine-rich immune mol 100.0 1.1E-31 3.6E-36 315.2 0.0 241 347-602 35-285 (487)
306 2z80_A TOLL-like receptor 2, v 100.0 1.1E-29 3.7E-34 286.4 15.3 279 319-602 29-317 (353)
307 4fcg_A Uncharacterized protein 100.0 3.5E-29 1.2E-33 278.5 17.1 211 361-576 95-314 (328)
308 3zyj_A Leucine-rich repeat-con 100.0 8.7E-29 3E-33 287.7 21.2 252 322-580 44-296 (440)
309 1wwl_A Monocyte differentiatio 100.0 1.2E-30 4E-35 288.7 4.2 245 322-578 44-311 (312)
310 3zyi_A Leucine-rich repeat-con 100.0 1.1E-28 3.6E-33 288.0 20.8 253 322-581 55-308 (452)
311 3zyi_A Leucine-rich repeat-con 100.0 1.2E-28 4.2E-33 287.4 21.3 247 293-552 56-303 (452)
312 3zyj_A Leucine-rich repeat-con 100.0 1.3E-28 4.4E-33 286.2 20.5 248 349-602 46-295 (440)
313 1wwl_A Monocyte differentiatio 100.0 1E-29 3.5E-34 281.1 10.3 253 169-456 41-310 (312)
314 1ozn_A Reticulon 4 receptor; N 100.0 4.3E-29 1.5E-33 272.5 14.7 232 370-602 32-264 (285)
315 3ogk_B Coronatine-insensitive 100.0 1.1E-31 3.8E-36 325.1 -7.8 425 110-578 61-528 (592)
316 3g06_A SSPH2 (leucine-rich rep 100.0 9.1E-28 3.1E-32 287.2 25.1 268 219-563 41-308 (622)
317 1ozn_A Reticulon 4 receptor; N 100.0 2.4E-28 8.1E-33 266.7 16.5 234 347-582 33-267 (285)
318 3o53_A Protein LRIM1, AGAP0063 100.0 1E-29 3.6E-34 281.8 2.5 266 222-534 14-282 (317)
319 3o53_A Protein LRIM1, AGAP0063 99.9 2.4E-29 8.2E-34 278.8 2.3 271 244-560 11-284 (317)
320 2p1m_B Transport inhibitor res 99.9 8.9E-31 3E-35 317.2 -16.6 463 61-580 34-548 (594)
321 4azs_A Methyltransferase WBDD; 99.9 6.5E-28 2.2E-32 286.7 4.9 186 686-909 241-437 (569)
322 3oja_A Leucine-rich immune mol 99.9 6.1E-27 2.1E-31 274.7 12.7 227 363-603 27-254 (487)
323 2o6q_A Variable lymphocyte rec 99.9 3.6E-26 1.2E-30 247.1 17.6 215 59-304 2-218 (270)
324 2z62_A TOLL-like receptor 4, v 99.9 4.1E-26 1.4E-30 247.7 17.2 210 371-582 29-243 (276)
325 2z62_A TOLL-like receptor 4, v 99.9 2.9E-25 1E-29 240.9 18.2 209 346-556 28-241 (276)
326 2o6q_A Variable lymphocyte rec 99.9 1.3E-24 4.5E-29 234.8 20.4 205 372-580 18-222 (270)
327 1p9a_G Platelet glycoprotein I 99.9 4.1E-25 1.4E-29 241.0 15.6 204 366-577 6-209 (290)
328 1p9a_G Platelet glycoprotein I 99.9 1.5E-24 5.2E-29 236.5 18.1 206 390-602 6-211 (290)
329 2p1m_B Transport inhibitor res 99.9 2.4E-28 8.1E-33 295.9 -13.5 214 361-577 280-520 (594)
330 3rfs_A Internalin B, repeat mo 99.9 1.5E-24 5.2E-29 234.6 15.0 91 365-455 104-194 (272)
331 3rfs_A Internalin B, repeat mo 99.9 7.9E-25 2.7E-29 236.8 12.4 222 347-582 20-241 (272)
332 4glp_A Monocyte differentiatio 99.9 5.8E-24 2E-28 234.8 14.5 202 369-577 90-308 (310)
333 3goz_A Leucine-rich repeat-con 99.9 8.9E-26 3.1E-30 255.1 -2.4 233 199-455 3-266 (362)
334 2ca6_A RAN GTPase-activating p 99.9 1.1E-25 3.7E-30 256.9 -3.4 193 367-580 91-320 (386)
335 2xwt_C Thyrotropin receptor; s 99.9 1.3E-23 4.3E-28 222.7 12.8 196 371-573 32-236 (239)
336 2ast_B S-phase kinase-associat 99.9 2.4E-25 8.1E-30 249.1 -1.5 271 59-368 34-315 (336)
337 3goz_A Leucine-rich repeat-con 99.9 4.6E-25 1.6E-29 249.2 0.6 252 327-580 4-301 (362)
338 2ca6_A RAN GTPase-activating p 99.9 1.7E-25 5.9E-30 255.3 -4.1 257 258-556 23-320 (386)
339 3cvr_A Invasion plasmid antige 99.9 2.5E-24 8.7E-29 254.1 4.2 207 51-289 32-252 (571)
340 3m19_A Variable lymphocyte rec 99.9 1.4E-22 4.8E-27 216.4 17.2 182 371-580 15-196 (251)
341 3en9_A Glycoprotease, O-sialog 99.9 5.9E-24 2E-28 251.3 7.1 196 679-911 336-539 (540)
342 4glp_A Monocyte differentiatio 99.9 1.6E-23 5.3E-28 231.3 10.0 199 348-553 93-308 (310)
343 2xwt_C Thyrotropin receptor; s 99.9 6.4E-23 2.2E-27 217.3 13.3 196 346-549 31-236 (239)
344 1h6u_A Internalin H; cell adhe 99.9 1E-22 3.4E-27 224.3 14.6 212 348-578 21-232 (308)
345 3m19_A Variable lymphocyte rec 99.9 6.2E-22 2.1E-26 211.3 17.2 181 346-554 14-194 (251)
346 4ay9_X Follicle-stimulating ho 99.9 3.2E-22 1.1E-26 224.7 15.6 241 324-573 12-256 (350)
347 2ast_B S-phase kinase-associat 99.9 7.7E-24 2.6E-28 236.8 2.0 251 323-582 49-312 (336)
348 4ay9_X Follicle-stimulating ho 99.9 6.8E-22 2.3E-26 222.0 17.4 238 199-451 14-255 (350)
349 1h6u_A Internalin H; cell adhe 99.9 1.5E-21 5.1E-26 214.9 15.1 174 365-553 58-231 (308)
350 3cvr_A Invasion plasmid antige 99.9 1.5E-21 5E-26 230.6 13.4 188 322-563 60-254 (571)
351 1dce_A Protein (RAB geranylger 99.9 1.4E-23 4.7E-28 249.4 -4.3 222 63-308 286-550 (567)
352 2o6s_A Variable lymphocyte rec 99.8 8.1E-21 2.8E-25 196.5 14.0 161 371-563 29-189 (208)
353 2o6s_A Variable lymphocyte rec 99.8 1.5E-20 5.3E-25 194.3 15.6 163 346-516 28-190 (208)
354 1zar_A RIO2 kinase; serine kin 99.8 5E-21 1.7E-25 207.2 10.3 140 673-839 84-241 (282)
355 4b8c_D Glucose-repressible alc 99.8 8.3E-22 2.8E-26 241.5 1.4 232 31-277 130-369 (727)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 1.7E-20 5.8E-25 195.6 9.2 158 421-582 14-172 (220)
357 1h6t_A Internalin B; cell adhe 99.8 7.3E-20 2.5E-24 199.6 10.8 189 348-577 26-214 (291)
358 2v9t_B SLIT homolog 2 protein 99.8 4.6E-20 1.6E-24 192.3 8.8 137 443-580 33-169 (220)
359 1m9s_A Internalin B; cell inva 99.8 1.9E-19 6.5E-24 215.0 15.0 188 197-432 24-211 (605)
360 1h6t_A Internalin B; cell adhe 99.8 1.3E-19 4.5E-24 197.5 12.4 172 391-600 43-214 (291)
361 2xot_A Amphoterin-induced prot 99.8 7.3E-20 2.5E-24 206.3 10.4 178 373-578 21-204 (361)
362 1m9s_A Internalin B; cell inva 99.8 2.2E-19 7.5E-24 214.5 14.1 191 347-554 22-212 (605)
363 2v9t_B SLIT homolog 2 protein 99.8 4.6E-19 1.6E-23 184.7 13.2 154 445-602 14-168 (220)
364 3e6j_A Variable lymphocyte rec 99.8 9.5E-19 3.3E-23 183.6 14.9 156 396-580 21-176 (229)
365 1dce_A Protein (RAB geranylger 99.8 1.2E-21 4.2E-26 232.6 -8.2 192 367-582 346-552 (567)
366 2xot_A Amphoterin-induced prot 99.8 4.2E-19 1.4E-23 200.0 12.0 179 349-552 21-202 (361)
367 4b8c_D Glucose-repressible alc 99.8 1.3E-19 4.5E-24 222.1 6.2 200 353-580 208-408 (727)
368 2v70_A SLIT-2, SLIT homolog 2 99.8 2.6E-18 8.9E-23 179.0 14.4 110 347-456 58-167 (220)
369 3e6j_A Variable lymphocyte rec 99.8 5.8E-18 2E-22 177.6 15.0 135 370-530 40-174 (229)
370 1w8a_A SLIT protein; signaling 99.7 1E-18 3.5E-23 177.9 7.8 133 470-602 32-165 (192)
371 1xeu_A Internalin C; cellular 99.7 1.6E-18 5.5E-23 185.8 9.5 170 369-578 18-187 (263)
372 4ezg_A Putative uncharacterize 99.7 3.4E-18 1.2E-22 174.9 10.4 82 490-575 111-193 (197)
373 1xeu_A Internalin C; cellular 99.7 1.9E-18 6.6E-23 185.2 8.9 167 346-528 19-185 (263)
374 4ezg_A Putative uncharacterize 99.7 5.9E-18 2E-22 173.2 10.6 156 389-553 39-195 (197)
375 1w8a_A SLIT protein; signaling 99.7 9.3E-18 3.2E-22 170.8 10.5 175 421-603 11-187 (192)
376 1zth_A RIO1 serine protein kin 99.7 6.6E-18 2.3E-22 180.5 9.6 138 680-840 48-219 (258)
377 3sb4_A Hypothetical leucine ri 99.7 1.2E-17 4.1E-22 185.7 10.1 269 170-448 48-327 (329)
378 3sb4_A Hypothetical leucine ri 99.7 4E-17 1.4E-21 181.4 8.4 194 369-569 100-327 (329)
379 2wfh_A SLIT homolog 2 protein 99.7 5.3E-17 1.8E-21 165.2 7.5 130 446-580 14-143 (193)
380 2wfh_A SLIT homolog 2 protein 99.6 5.3E-16 1.8E-20 157.7 11.8 130 470-603 13-143 (193)
381 2ell_A Acidic leucine-rich nuc 99.6 4.5E-16 1.6E-20 154.7 10.2 133 418-577 24-161 (168)
382 2ell_A Acidic leucine-rich nuc 99.6 5.2E-16 1.8E-20 154.2 9.3 132 370-504 24-160 (168)
383 2o6r_A Variable lymphocyte rec 99.6 1.1E-15 3.9E-20 153.2 11.3 112 470-581 31-142 (177)
384 2je0_A Acidic leucine-rich nuc 99.6 5.5E-16 1.9E-20 150.7 7.7 128 417-571 16-148 (149)
385 2je0_A Acidic leucine-rich nuc 99.6 7.8E-16 2.7E-20 149.6 8.2 129 392-547 15-148 (149)
386 2o6r_A Variable lymphocyte rec 99.6 8.7E-15 3E-19 146.7 13.2 132 324-459 10-141 (177)
387 4fdw_A Leucine rich hypothetic 99.6 2.9E-14 9.8E-19 161.9 16.8 223 213-455 131-358 (401)
388 1ds9_A Outer arm dynein; leuci 99.6 8.4E-17 2.9E-21 164.7 -4.2 131 393-529 17-154 (198)
389 4gyi_A RIO2 kinase; protein ki 99.6 3.5E-15 1.2E-19 165.1 8.2 136 680-840 96-265 (397)
390 4fdw_A Leucine rich hypothetic 99.5 4.7E-14 1.6E-18 160.1 17.2 265 218-552 113-383 (401)
391 1ds9_A Outer arm dynein; leuci 99.5 5.8E-17 2E-21 165.9 -6.2 155 414-576 14-185 (198)
392 1a9n_A U2A', U2A'; complex (nu 99.5 8.9E-15 3E-19 146.5 7.2 132 414-576 15-153 (176)
393 1a9n_A U2A', U2A'; complex (nu 99.5 1.5E-14 5E-19 144.9 6.8 135 388-552 13-153 (176)
394 3g39_A Variable lymphocyte rec 99.5 4.2E-14 1.4E-18 140.5 9.8 109 470-581 12-120 (170)
395 4fs7_A Uncharacterized protein 99.5 3.9E-13 1.3E-17 153.1 18.8 312 212-573 65-376 (394)
396 2r9u_A Variable lymphocyte rec 99.5 8.8E-14 3E-18 138.6 9.8 108 470-580 15-122 (174)
397 4fs7_A Uncharacterized protein 99.4 1.2E-12 4.2E-17 149.0 18.8 314 233-596 61-376 (394)
398 3g39_A Variable lymphocyte rec 99.4 5.7E-13 2E-17 132.3 11.5 106 349-457 12-117 (170)
399 2r9u_A Variable lymphocyte rec 99.4 6.7E-13 2.3E-17 132.2 11.0 103 350-455 16-118 (174)
400 2ifg_A High affinity nerve gro 99.3 1.4E-12 4.9E-17 145.8 7.5 131 471-604 12-146 (347)
401 3un9_A NLR family member X1; l 99.3 6.5E-14 2.2E-18 157.4 -6.8 86 491-576 155-252 (372)
402 2ifg_A High affinity nerve gro 99.2 1.3E-11 4.4E-16 138.0 10.1 108 494-603 11-120 (347)
403 3un9_A NLR family member X1; l 99.2 2.9E-13 1E-17 152.1 -3.9 168 393-561 71-261 (372)
404 4gt6_A Cell surface protein; l 99.2 2.6E-10 9E-15 129.7 19.0 201 363-575 176-390 (394)
405 4gt6_A Cell surface protein; l 99.2 4.6E-10 1.6E-14 127.6 19.6 310 219-552 65-391 (394)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4.1E-15 124.5 11.3 147 674-838 9-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 98.9 1.3E-09 4.4E-14 116.2 7.8 136 680-838 21-213 (264)
408 2ra8_A Uncharacterized protein 98.9 1E-09 3.5E-14 122.0 6.1 159 410-574 164-341 (362)
409 4h09_A Hypothetical leucine ri 98.8 7.6E-08 2.6E-12 108.6 19.9 84 486-571 258-341 (379)
410 4h09_A Hypothetical leucine ri 98.8 1.3E-07 4.5E-12 106.7 18.2 302 240-563 43-356 (379)
411 2ra8_A Uncharacterized protein 98.7 2.3E-09 7.7E-14 119.3 2.7 160 414-577 135-321 (362)
412 3dxp_A Putative acyl-COA dehyd 98.7 1.8E-08 6.2E-13 112.8 10.1 145 683-839 42-248 (359)
413 3sg8_A APH(2'')-ID; antibiotic 98.7 1.3E-08 4.5E-13 111.1 6.5 139 684-839 25-223 (304)
414 3rw6_A Nuclear RNA export fact 98.4 4.8E-08 1.6E-12 102.9 2.6 65 514-580 169-237 (267)
415 3rw6_A Nuclear RNA export fact 98.4 7.1E-08 2.4E-12 101.6 2.2 96 472-569 148-257 (267)
416 3r70_A Aminoglycoside phosphot 98.3 3.1E-06 1.1E-10 92.8 12.6 136 680-839 38-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.3 1.2E-07 4.2E-12 94.9 0.0 119 437-576 31-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.2 2.1E-07 7E-12 93.3 0.7 123 409-552 27-164 (185)
419 4gkh_A Aminoglycoside 3'-phosp 98.2 7.9E-06 2.7E-10 87.2 11.9 135 686-838 31-222 (272)
420 3tdw_A Gentamicin resistance p 98.1 1.8E-05 6E-10 86.1 12.8 137 684-839 24-224 (306)
421 3d1u_A Putative fructosamine-3 98.0 1.9E-05 6.5E-10 84.8 12.0 145 682-838 18-215 (288)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 3.3E-05 1.1E-09 85.9 10.8 147 682-839 44-243 (362)
423 3ats_A Putative uncharacterize 97.7 3.4E-05 1.2E-09 85.9 7.7 84 684-769 25-121 (357)
424 2olc_A MTR kinase, methylthior 97.7 4.5E-05 1.5E-09 86.3 7.3 76 684-766 35-120 (397)
425 3e4g_A ATP synthase subunit S, 97.5 4E-05 1.4E-09 74.7 3.0 84 491-574 61-150 (176)
426 2q83_A YTAA protein; 2635576, 97.4 0.00083 2.8E-08 74.0 13.0 148 685-838 38-251 (346)
427 3e4g_A ATP synthase subunit S, 97.2 6.8E-05 2.3E-09 73.0 0.5 84 370-453 61-150 (176)
428 3f7w_A Putative fructosamine-3 97.0 0.0018 6.1E-08 69.4 10.2 79 679-767 15-96 (288)
429 3rfe_A Platelet glycoprotein I 97.0 0.00079 2.7E-08 62.5 5.6 58 518-577 11-69 (130)
430 2pyw_A Uncharacterized protein 96.9 0.0013 4.5E-08 74.7 8.2 30 809-839 232-261 (420)
431 3jr1_A Putative fructosamine-3 96.9 0.0041 1.4E-07 67.1 11.6 142 683-835 40-232 (312)
432 3rfe_A Platelet glycoprotein I 96.9 0.0013 4.6E-08 60.9 6.2 58 543-602 12-71 (130)
433 2ppq_A HSK, HK, homoserine kin 96.6 0.011 3.8E-07 64.2 12.7 167 668-838 6-216 (322)
434 3dxq_A Choline/ethanolamine ki 96.6 0.0037 1.3E-07 67.3 8.7 141 683-839 22-202 (301)
435 1pgv_A TMD-1, tropomodulin TMD 96.6 0.00025 8.5E-09 70.4 -1.2 42 291-334 70-111 (197)
436 1pgv_A TMD-1, tropomodulin TMD 96.5 0.00022 7.4E-09 70.8 -2.0 62 393-454 97-169 (197)
437 1zyl_A Hypothetical protein YI 96.4 0.026 8.8E-07 61.5 13.7 166 668-839 10-223 (328)
438 3feg_A Choline/ethanolamine ki 96.4 0.0083 2.8E-07 66.6 9.7 144 684-838 55-253 (379)
439 2qg7_A Ethanolamine kinase PV0 96.3 0.008 2.7E-07 68.6 9.3 75 684-768 113-188 (458)
440 3csv_A Aminoglycoside phosphot 96.2 0.024 8.3E-07 61.9 12.1 144 685-839 24-217 (333)
441 1nw1_A Choline kinase (49.2 KD 95.8 0.038 1.3E-06 62.6 11.5 73 684-767 78-158 (429)
442 3c5i_A Choline kinase; choline 95.7 0.014 4.9E-07 64.8 7.4 74 684-767 38-120 (369)
443 3i1a_A Spectinomycin phosphotr 95.1 0.033 1.1E-06 61.0 7.5 31 809-839 206-236 (339)
444 2yle_A Protein spire homolog 1 94.9 0.076 2.6E-06 52.9 8.8 102 767-909 34-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 93.7 0.34 1.2E-05 53.8 11.8 145 684-838 57-279 (401)
446 3mes_A Choline kinase; malaria 93.2 0.12 4E-06 58.1 7.1 145 684-839 75-291 (424)
447 3g15_A CK, chetk-alpha, cholin 89.9 0.71 2.4E-05 51.5 9.0 30 810-839 245-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 80.2 0.22 7.5E-06 56.8 -1.6 60 683-745 146-213 (463)
449 4ann_A ESSB; membrane protein, 77.4 2.7 9.3E-05 41.7 5.5 50 784-838 78-127 (215)
450 4ano_A ESSB; membrane protein, 64.8 10 0.00034 37.8 6.3 84 734-838 48-132 (219)
451 2ks1_B Epidermal growth factor 46.5 1.8 6E-05 30.8 -1.9 7 645-651 33-39 (44)
452 2lz0_A Uncharacterized protein 31.4 58 0.002 27.7 4.9 45 255-300 8-52 (100)
453 2jwa_A Receptor tyrosine-prote 30.4 3.7 0.00012 29.1 -2.4 9 644-652 32-40 (44)
454 2lz0_A Uncharacterized protein 25.1 1.2E+02 0.0041 25.7 5.8 13 413-425 38-50 (100)
455 3ox7_P MH027; urokinase-type p 23.1 17 0.0006 20.6 0.0 9 60-68 6-14 (23)
456 2l2t_A Receptor tyrosine-prote 21.6 7.9 0.00027 27.5 -2.0 7 645-651 32-38 (44)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-83 Score=799.30 Aligned_cols=580 Identities=28% Similarity=0.449 Sum_probs=460.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCeeeeeeecCCCCcEEEEeccCCCCCCc---cc------------
Q 001908 27 SAHTNETDRLALLAIKSQLHDPLGVTNSWNNSINLCQWAGVTCGHRHQRVTELDLRHQNIGGS---LS------------ 91 (997)
Q Consensus 27 ~~~~~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~---~~------------ 91 (997)
++.+.++|++|||+||+++.||. .+++|+.++|||+|+||+|+ ++||+.|||+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l 82 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLPDKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESL 82 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCSCTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEE
T ss_pred cccCCHHHHHHHHHHHhhCCCcc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCccccc
Confidence 34457899999999999999998 89999988899999999998 68999999999999887 55
Q ss_pred -----------ccccCccccccccccccccCCCCCc--cCCCCCCCeEEEccCCCccccCCccc-cCCCcccchhccccc
Q 001908 92 -----------PYVGNLSFLRYINLATNNFHGEIPK--EIGFLFRLETLMLANNSFSGKIPTNL-SSCSNLLSFVAYRNN 157 (997)
Q Consensus 92 -----------~~l~~l~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~iP~~l-~~l~~L~~l~l~~n~ 157 (997)
+.++++++|++|||++|+++|.+|. .++++++|++|||++|.++|.+|..+ +++++|++|++++|+
T Consensus 83 ~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~ 162 (768)
T 3rgz_A 83 FLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANS 162 (768)
T ss_dssp ECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSC
T ss_pred CCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCc
Confidence 4677888899999999999988888 88889999999999998888888766 667777777777666
Q ss_pred cccccccc---cc---------------------ccccccceeecccccccCcCcCccCcch-hhhhhccCccccccCCC
Q 001908 158 LVGEIPED---IG---------------------YSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPP 212 (997)
Q Consensus 158 ~~g~ip~~---~~---------------------~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~ 212 (997)
+.+..|.. +. ..+++|++|+|++|.+++.+|. +++++ +++|++++|++++.+|.
T Consensus 163 l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~ 241 (768)
T 3rgz_A 163 ISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSR 241 (768)
T ss_dssp CEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHH
T ss_pred cCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccH
Confidence 66555433 10 2456777788888888877776 76663 55677777777777777
Q ss_pred cccCCCccceeeccCCCCCCC----------------------CCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCc
Q 001908 213 SLYNMSSLENILLDVNGFTGN----------------------LPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIE 270 (997)
Q Consensus 213 ~l~~l~~L~~L~L~~N~l~g~----------------------lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 270 (997)
.+.++++|++|+|++|+++|. +|..++..+++|++|+|++|++++.+|..|+++++|+
T Consensus 242 ~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~ 321 (768)
T 3rgz_A 242 AISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLE 321 (768)
T ss_dssp HTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCC
T ss_pred HHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCcc
Confidence 777777777777777666654 4444443345666666666666666666666666666
Q ss_pred EEeccCccCCCccccc-ccccCccCeeEccCccCCCCCCCCcc-------------------hhhhhcc--CCCCcEEEe
Q 001908 271 IIDLPINYFTGKVSII-FGRLKNLWSLDLGINNLGSGGANDLD-------------------FVTILTN--CSKLKVLAF 328 (997)
Q Consensus 271 ~L~Ls~N~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~-------------------~~~~l~~--l~~L~~L~L 328 (997)
+|+|++|+++|.+|.. |+.+++|++|+|++|++++..+..+. .+..+.. +++|++|++
T Consensus 322 ~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L 401 (768)
T 3rgz_A 322 SLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYL 401 (768)
T ss_dssp EEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEEC
T ss_pred EEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEEC
Confidence 6666666666555443 56666666666666665422111110 0111122 456677777
Q ss_pred ecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccc
Q 001908 329 EENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQG 408 (997)
Q Consensus 329 ~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 408 (997)
++|++++.+|..+.++ ++|+.|++++|++++.+|..|+++++|++|++++|++++.+|..|..+++|++|+|++|++++
T Consensus 402 ~~n~l~~~~p~~l~~l-~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 402 QNNGFTGKIPPTLSNC-SELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CSSEEEEECCGGGGGC-TTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCccccccCHHHhcC-CCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 7777777777777766 678888888888888888888888888888888888888888888888888888888888888
Q ss_pred cchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCcccc-
Q 001908 409 NIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEV- 487 (997)
Q Consensus 409 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~- 487 (997)
.+|..+.++++|+.|+|++|++++.+|.+|+++++|++|+|++|+++|.+|..+..++++ +.|++++|+++|.+|..+
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L-~~L~Ls~N~l~g~ip~~~~ 559 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSL-IWLDLNTNLFNGTIPAAMF 559 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTC-CEEECCSSEEESBCCGGGG
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCC-CEEECCCCccCCcCChHHh
Confidence 888888888999999999999988888888889999999999999988889888888888 889999998888777544
Q ss_pred ---------------------------------------------------------------------ccccccceecc
Q 001908 488 ---------------------------------------------------------------------GNLKNLVALYI 498 (997)
Q Consensus 488 ---------------------------------------------------------------------~~l~~L~~L~L 498 (997)
+.+++|+.|||
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdL 639 (768)
T 3rgz_A 560 KQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDM 639 (768)
T ss_dssp TTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEEC
T ss_pred cccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEEC
Confidence 33567899999
Q ss_pred ccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 499 SGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 499 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
++|+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..+..+++|++|||++|+|+|.
T Consensus 640 s~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~ 719 (768)
T 3rgz_A 640 SYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGP 719 (768)
T ss_dssp CSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEE
T ss_pred cCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcCCCCcceeecCCCCcCCCCCCCCCCCCCCcCC
Q 001908 579 VPTKGVFSNKTRVQLTGNGKLCGGSNELHLPSCPSKRS 616 (997)
Q Consensus 579 ~p~~~~~~~~~~~~~~~N~~~C~~~~~~~~~~c~~~~~ 616 (997)
||..++|.++...+|.|||++||.+ .++|+....
T Consensus 720 iP~~~~~~~~~~~~~~gN~~Lcg~~----l~~C~~~~~ 753 (768)
T 3rgz_A 720 IPEMGQFETFPPAKFLNNPGLCGYP----LPRCDPSNA 753 (768)
T ss_dssp CCSSSSGGGSCGGGGCSCTEEESTT----SCCCCSCC-
T ss_pred CCCchhhccCCHHHhcCCchhcCCC----CcCCCCCcc
Confidence 9999999999999999999999853 247865543
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.7e-64 Score=623.17 Aligned_cols=491 Identities=33% Similarity=0.547 Sum_probs=433.7
Q ss_pred CCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchh
Q 001908 73 HQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFV 152 (997)
Q Consensus 73 ~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~ 152 (997)
-.+++.|+|++|.+.+.+|. +++++|++|+|++|++++.+|. ++++++|++|+|++|.++|.+|..++++++|++|+
T Consensus 177 l~~L~~L~Ls~n~l~~~~~~--~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~ 253 (768)
T 3rgz_A 177 CGELKHLAISGNKISGDVDV--SRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLN 253 (768)
T ss_dssp CTTCCEEECCSSEEESCCBC--TTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEE
T ss_pred CCCCCEEECCCCcccccCCc--ccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEE
Confidence 35789999999998887664 8889999999999999988887 89999999999999999999999999999999999
Q ss_pred cccccccccccccccccccccceeecccccccCcCcCccCcc--hhhhhhccCccccccCCCcccCCCccceeeccCCCC
Q 001908 153 AYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL--SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGF 230 (997)
Q Consensus 153 l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l--~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l 230 (997)
+++|++.|.+|.. .+++|++|+|++|.++|.+|..++.. ++++|++++|++++.+|..++++++|++|+|++|++
T Consensus 254 Ls~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l 330 (768)
T 3rgz_A 254 ISSNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF 330 (768)
T ss_dssp CCSSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEE
T ss_pred CCCCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcc
Confidence 9999999888875 57889999999999999999888764 466799999999999999999999999999999999
Q ss_pred CCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCC-CCcEEeccCccCCCcccccccc--cCccCeeEccCccCCCCC
Q 001908 231 TGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNAS-NIEIIDLPINYFTGKVSIIFGR--LKNLWSLDLGINNLGSGG 307 (997)
Q Consensus 231 ~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~--l~~L~~L~Ls~N~l~~~~ 307 (997)
+|.+|...+..+++|++|++++|+++|.+|..+.+++ +|++|+|++|++++.++..+.. +++|++|+|++|++++.
T Consensus 331 ~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~- 409 (768)
T 3rgz_A 331 SGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK- 409 (768)
T ss_dssp EEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEE-
T ss_pred cCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccc-
Confidence 9889988666899999999999999999999998887 8999999999998888887776 88899999999988753
Q ss_pred CCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC
Q 001908 308 ANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP 387 (997)
Q Consensus 308 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 387 (997)
.+..+.++++|++|++++|++++.+|..+..+ ++|+.|++++|++++.+|..+..+++|++|++++|++++.+|
T Consensus 410 -----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 483 (768)
T 3rgz_A 410 -----IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL-SKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIP 483 (768)
T ss_dssp -----CCGGGGGCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCC
T ss_pred -----cCHHHhcCCCCCEEECcCCcccCcccHHHhcC-CCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCC
Confidence 34567888999999999999998999888887 679999999999999999999999999999999999998899
Q ss_pred CCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccc---
Q 001908 388 REIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILT--- 464 (997)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~--- 464 (997)
..+.++++|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..++++++|++|++++|+++|.+|..++.
T Consensus 484 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~ 563 (768)
T 3rgz_A 484 SGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSG 563 (768)
T ss_dssp GGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTT
T ss_pred HHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccc
Confidence 99999999999999999999889999999999999999999999889999999999999999999998888876543
Q ss_pred -------------------------------------------------------------------ccccccccccCCC
Q 001908 465 -------------------------------------------------------------------ITTLSRFLDLGNN 477 (997)
Q Consensus 465 -------------------------------------------------------------------l~~ll~~L~Ls~N 477 (997)
+..+ ++|||++|
T Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L-~~LdLs~N 642 (768)
T 3rgz_A 564 KIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSM-MFLDMSYN 642 (768)
T ss_dssp CBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCC-CEEECCSS
T ss_pred hhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccc-cEEECcCC
Confidence 3445 78999999
Q ss_pred cccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCch
Q 001908 478 HLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPE 557 (997)
Q Consensus 478 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 557 (997)
+++|.+|..|+++++|+.|+|++|+++|.+|..|+++++|+.|||++|+++|.+|..++.++.|++|||++|+++|.+|.
T Consensus 643 ~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~ 722 (768)
T 3rgz_A 643 MLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722 (768)
T ss_dssp CCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCS
T ss_pred cccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred hccCCCCCCEEeCCCCc-Cccc
Q 001908 558 FLENLSFLEYLNLSYNH-FDGE 578 (997)
Q Consensus 558 ~~~~l~~L~~L~ls~N~-l~~~ 578 (997)
. ..+..+....+.+|+ |+|.
T Consensus 723 ~-~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 723 M-GQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp S-SSGGGSCGGGGCSCTEEEST
T ss_pred c-hhhccCCHHHhcCCchhcCC
Confidence 5 334555666777886 5653
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-62 Score=597.75 Aligned_cols=524 Identities=20% Similarity=0.232 Sum_probs=423.4
Q ss_pred CHHHHHHHHHHHHhcCCCCC--------CCCCCCCCCCCCee---eeeeecCCCCcEEEEeccCCCCCCcccccccCccc
Q 001908 31 NETDRLALLAIKSQLHDPLG--------VTNSWNNSINLCQW---AGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSF 99 (997)
Q Consensus 31 ~~~~~~aLl~~k~~~~~~~~--------~~~sW~~~~~~c~w---~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~ 99 (997)
...|+.||.+||+++.++.. ...+|+.+++||.| .||+|+.. +||+.|+|+++++.|.+|+++++|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCcc
Confidence 45799999999999765532 23489988999999 99999865 89999999999999999999999999
Q ss_pred cccccccccccC------C------CCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccccccccccc
Q 001908 100 LRYINLATNNFH------G------EIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIG 167 (997)
Q Consensus 100 L~~L~Ls~N~l~------g------~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~ 167 (997)
|++|||++|++. | .+|.+. +.+|+ +++++|.+.|.+|. .+.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~------------------------~~~ 159 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRE------------------------DFS 159 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGG------------------------GSC
T ss_pred ceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchh------------------------hHH
Confidence 999999999873 3 333333 34444 55555555554444 443
Q ss_pred ccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCC--------------
Q 001908 168 YSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGN-------------- 233 (997)
Q Consensus 168 ~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~-------------- 233 (997)
..+.++..+++....+... ..-.+...++....|+++| ||++++++++|++|+|++|+++|.
T Consensus 160 ~~~~~l~~~~l~~~~~~~~---~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~ 235 (636)
T 4eco_A 160 DLIKDCINSDPQQKSIKKS---SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYA 235 (636)
T ss_dssp HHHHHHHHHCTTSCCCCCC---CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHH
T ss_pred HHHHHHhhcCccccccccc---cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchh
Confidence 3334444555554443311 1112223345556899999 999999999999999999999986
Q ss_pred ---CCcccc-ccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCcc-CCC-ccccccccc------CccCeeEccCc
Q 001908 234 ---LPLDIG-VTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINY-FTG-KVSIIFGRL------KNLWSLDLGIN 301 (997)
Q Consensus 234 ---lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l------~~L~~L~Ls~N 301 (997)
+|..++ .++++|++|+|++|++.|.+|.+|+++++|++|+|++|+ ++| .+|..++.+ ++|++|+|++|
T Consensus 236 ~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n 315 (636)
T 4eco_A 236 QQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYN 315 (636)
T ss_dssp HHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSS
T ss_pred cccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCC
Confidence 998875 379999999999999999999999999999999999998 999 889888887 99999999999
Q ss_pred cCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCC-CCEEeccCC
Q 001908 302 NLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVN-LNLLGIEFN 380 (997)
Q Consensus 302 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~-L~~L~L~~N 380 (997)
+++.++. ...+.++++|++|++++|+++|.+| .+..+ ++|+.|++++|+++ .+|..+.++++ |++|++++|
T Consensus 316 ~l~~ip~-----~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l-~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 316 NLKTFPV-----ETSLQKMKKLGMLECLYNQLEGKLP-AFGSE-IKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp CCSSCCC-----HHHHTTCTTCCEEECCSCCCEEECC-CCEEE-EEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred cCCccCc-----hhhhccCCCCCEEeCcCCcCccchh-hhCCC-CCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 9985432 1168899999999999999999999 88877 78999999999999 88999999999 999999999
Q ss_pred CCCCCCCCCccccc--ccceeccccccccccchhhhc-------CCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC
Q 001908 381 QLTGNIPREIGQLR--NLQAIGLSSNFLQGNIPSSLG-------NLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 381 ~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (997)
+++ .+|..+..++ +|++|+|++|++++.+|..+. .+++|+.|+|++|++++..+..+..+++|++|+|++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~ 466 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMG 466 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCS
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCC
Confidence 999 7888887765 899999999999999999998 888999999999999954444566789999999999
Q ss_pred CcccCCccccccccc--------ccccccccCCCcccCCCccccc--cccccceeccccccccccccccccCCcCccEEE
Q 001908 452 NKLIGAVPQQILTIT--------TLSRFLDLGNNHLNGSLPLEVG--NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFH 521 (997)
Q Consensus 452 N~l~~~~p~~~~~l~--------~ll~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (997)
|+++ .+|...+... ++ +.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..+.++++|+.|+
T Consensus 467 N~l~-~i~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~ 542 (636)
T 4eco_A 467 NMLT-EIPKNSLKDENENFKNTYLL-TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFG 542 (636)
T ss_dssp SCCS-BCCSSSSEETTEECTTGGGC-CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEE
T ss_pred CCCC-CcCHHHhccccccccccCCc-cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEE
Confidence 9998 7887666543 66 88999999999 7888886 89999999999999996 899999999999999
Q ss_pred c------cCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCC---cCCCCccee
Q 001908 522 M------QGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKG---VFSNKTRVQ 592 (997)
Q Consensus 522 L------s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~---~~~~~~~~~ 592 (997)
| ++|++.+.+|..+..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+... .......+.
T Consensus 543 Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~ 619 (636)
T 4eco_A 543 IRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNISIDLSYVCPYIEAGMYMLF 619 (636)
T ss_dssp CCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTCEEECTTTHHHHHTTCCEEE
T ss_pred CCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCccccHHhcchhhhcccceee
Confidence 9 56778889999999999999999999999 57888766 789999999998875433221 122333444
Q ss_pred ecCCCCcCCC
Q 001908 593 LTGNGKLCGG 602 (997)
Q Consensus 593 ~~~N~~~C~~ 602 (997)
+..+...|+|
T Consensus 620 ~~~~~~i~~C 629 (636)
T 4eco_A 620 YDKTQDIRGC 629 (636)
T ss_dssp CCTTSEEESC
T ss_pred cCCccccCCC
Confidence 4455555554
No 4
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1e-59 Score=580.71 Aligned_cols=538 Identities=20% Similarity=0.212 Sum_probs=429.0
Q ss_pred CeeeeeeecC---------CCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCC
Q 001908 62 CQWAGVTCGH---------RHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANN 132 (997)
Q Consensus 62 c~w~gv~C~~---------~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 132 (997)
|.++-|.|.. -..+++.|||++|++.+..+..++++++|++|||++|++++..|..++++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 4455566653 1357999999999998877778999999999999999999888999999999999999999
Q ss_pred CccccCCc-cccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcch-hhhhhccCccccccC
Q 001908 133 SFSGKIPT-NLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTV 210 (997)
Q Consensus 133 ~l~g~iP~-~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~i 210 (997)
.++ .+|. .++++++|++|++++|++.+ +|...+..+++|++|+|++|.+++..|..+++++ +++|++++|++++..
T Consensus 84 ~l~-~l~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 161 (680)
T 1ziw_A 84 ELS-QLSDKTFAFCTNLTELHLMSNSIQK-IKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALK 161 (680)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCCCC-CCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBC
T ss_pred ccC-ccChhhhccCCCCCEEECCCCccCc-cChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccC
Confidence 998 5555 69999999999999999874 4444445688999999999999998888888874 667899999998776
Q ss_pred CCccc--CCCccceeeccCCCCCCCCCccccc--------------------------cCCCccEEEecCCcCcCCCCCC
Q 001908 211 PPSLY--NMSSLENILLDVNGFTGNLPLDIGV--------------------------TLPNLQVFAIGDNYFSGSIPES 262 (997)
Q Consensus 211 p~~l~--~l~~L~~L~L~~N~l~g~lp~~~~~--------------------------~l~~L~~L~L~~N~l~~~~p~~ 262 (997)
|..+. ++++|++|+|++|++++..|..+.. ..++|+.|++++|.+++..|..
T Consensus 162 ~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~ 241 (680)
T 1ziw_A 162 SEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTT 241 (680)
T ss_dssp HHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTT
T ss_pred HHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhH
Confidence 66554 5588888899888888655543321 1145666666666666666666
Q ss_pred CCCCCC--CcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcc-----------------------hh---
Q 001908 263 FSNASN--IEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLD-----------------------FV--- 314 (997)
Q Consensus 263 ~~~l~~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~-----------------------~~--- 314 (997)
|.+++. |++|||++|++++..+..|+.+++|++|+|++|++..+.+..+. ++
T Consensus 242 ~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~ 321 (680)
T 1ziw_A 242 FLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKID 321 (680)
T ss_dssp TGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEEC
T ss_pred hhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccC
Confidence 666644 66666666666666666666666666666666666554322111 01
Q ss_pred -hhhccCCCCcEEEeecCccCCCCcccccccccccccccccCccccc--ccCCCCCCC--CCCCEEeccCCCCCCCCCCC
Q 001908 315 -TILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISG--TIPSGIGNL--VNLNLLGIEFNQLTGNIPRE 389 (997)
Q Consensus 315 -~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~--~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~ 389 (997)
..+..+++|++|++++|++++..|..|..+ ++|+.|++++|.+++ ..+..|..+ ++|+.|++++|++++..|..
T Consensus 322 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~ 400 (680)
T 1ziw_A 322 DFSFQWLKCLEHLNMEDNDIPGIKSNMFTGL-INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDA 400 (680)
T ss_dssp TTTTTTCTTCCEEECCSCCBCCCCTTTTTTC-TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTT
T ss_pred hhhcccCCCCCEEECCCCccCCCChhHhccc-cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhh
Confidence 145567777777777777777777667666 567777777776442 222334333 47888888888898888999
Q ss_pred cccccccceeccccccccccch-hhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCccc--CCccccccccc
Q 001908 390 IGQLRNLQAIGLSSNFLQGNIP-SSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI--GAVPQQILTIT 466 (997)
Q Consensus 390 ~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~ 466 (997)
|..+++|++|+|++|++++.+| ..|.++++|+.|++++|++.+..+..|..+++|+.|++++|.+. +.+|..+..++
T Consensus 401 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 401 FSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred hhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 9999999999999999987666 68999999999999999999888999999999999999999986 67899999999
Q ss_pred ccccccccCCCcccCCCccccccccccceecccccccccccc--------ccccCCcCccEEEccCccccccCChhcccc
Q 001908 467 TLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIP--------VTLTGCTGLEIFHMQGNSFRGSIPLSLRSL 538 (997)
Q Consensus 467 ~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 538 (997)
++ +.|++++|++++..|..|.++++|++|+|++|++++..+ ..|.++++|+.|+|++|+++...+..|.++
T Consensus 481 ~L-~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 481 NL-TILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CC-CEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 99 999999999998888889999999999999999986432 247899999999999999995555679999
Q ss_pred CcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-C-cCCCCcceeecCCCCcCCCC
Q 001908 539 KSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-G-VFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 539 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~-~~~~~~~~~~~~N~~~C~~~ 603 (997)
++|+.|||++|+|++..+..|..+++|+.|+|++|++++.+|.. . .++++..+++.+|||.|+|.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999999877788899999999999999999987753 2 57889999999999999874
No 5
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2e-59 Score=578.39 Aligned_cols=519 Identities=19% Similarity=0.201 Sum_probs=358.8
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCC-----CC--Cee------------eeeeecCCCCcEEEEeccCCCCCCc
Q 001908 29 HTNETDRLALLAIKSQLHDPLGVTNSWNNSI-----NL--CQW------------AGVTCGHRHQRVTELDLRHQNIGGS 89 (997)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~sW~~~~-----~~--c~w------------~gv~C~~~~~~v~~L~L~~~~l~g~ 89 (997)
.+..+|++||++||+++.|| +|+.+. +| |.| .||+|+. ++||+.|+|+++++.|.
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ 338 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGR 338 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEE
T ss_pred ccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCc
Confidence 34578999999999999877 887544 55 999 9999986 68999999999999999
Q ss_pred ccccccCccccccccc-cccccCCCCCccCCCC----CC-----CeEEE-------ccCCCccc-----------cCCcc
Q 001908 90 LSPYVGNLSFLRYINL-ATNNFHGEIPKEIGFL----FR-----LETLM-------LANNSFSG-----------KIPTN 141 (997)
Q Consensus 90 ~~~~l~~l~~L~~L~L-s~N~l~g~~p~~~~~l----~~-----L~~L~-------Ls~N~l~g-----------~iP~~ 141 (997)
+|+++++|++|++||| ++|.++|..|...... +. ++..+ .....+++ ..+..
T Consensus 339 ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~ 418 (876)
T 4ecn_A 339 VPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIK 418 (876)
T ss_dssp ECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCC
T ss_pred CchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccccccc
Confidence 9999999999999999 9999999866432211 00 00000 00011111 11222
Q ss_pred ccCCCcccchhcc--cccccccccccccccccccceeecccccccC-cCcCccCcchhhhhhccCccccccCCCccc--C
Q 001908 142 LSSCSNLLSFVAY--RNNLVGEIPEDIGYSWLKLEHISLARNHLTG-MLPASIGNLSIIYLHVGENQFSGTVPPSLY--N 216 (997)
Q Consensus 142 l~~l~~L~~l~l~--~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~--~ 216 (997)
..+...++.+.+. .|++.| ||..++ .+++|++|+|++|+|+| .+|..+.. .+.|.++|.+|+.++ +
T Consensus 419 ~~~~l~l~~l~l~~~~N~L~~-IP~~l~-~L~~L~~L~Ls~N~Lsg~~i~~~~~~-------~s~n~~~g~iP~~l~f~~ 489 (876)
T 4ecn_A 419 KDSRISLKDTQIGNLTNRITF-ISKAIQ-RLTKLQIIYFANSPFTYDNIAVDWED-------ANSDYAKQYENEELSWSN 489 (876)
T ss_dssp CCCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGGGBSSSCSC-------TTSHHHHHHTTSCCCGGG
T ss_pred cccccchhhceeccccCcccc-hhHHHh-cCCCCCEEECcCCcCCCCcccccccc-------cccccccccCChhhhhcc
Confidence 2333344444444 488887 888765 58889999999999987 34433322 233677788888887 8
Q ss_pred CCccceeeccCCCCCCCCCccccccCCCccEEEecCCc-CcC-CCCCCCCCCC-------CCcEEeccCccCCCcccc--
Q 001908 217 MSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNY-FSG-SIPESFSNAS-------NIEIIDLPINYFTGKVSI-- 285 (997)
Q Consensus 217 l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~~~-- 285 (997)
+++|++|+|++|++.|.+|..++ ++++|++|+|++|+ ++| .+|..+++++ +|++|+|++|+++ .+|.
T Consensus 490 L~~L~~L~Ls~N~l~~~iP~~l~-~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~ 567 (876)
T 4ecn_A 490 LKDLTDVELYNCPNMTQLPDFLY-DLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASA 567 (876)
T ss_dssp CTTCCEEEEESCTTCCSCCGGGG-GCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHH
T ss_pred CCCCCEEECcCCCCCccChHHHh-CCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChh
Confidence 88888888888888888886665 78888888888887 887 7887665554 8888888888888 5666
Q ss_pred cccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCC
Q 001908 286 IFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSG 365 (997)
Q Consensus 286 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~ 365 (997)
.|+++++|++|+|++|+++.++ .+..+++|++|+|++|+++ .+|..+..+..+|+.|++++|.|+ .+|..
T Consensus 568 ~l~~L~~L~~L~Ls~N~l~~lp--------~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~ 637 (876)
T 4ecn_A 568 SLQKMVKLGLLDCVHNKVRHLE--------AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNI 637 (876)
T ss_dssp HHTTCTTCCEEECTTSCCCBCC--------CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSC
T ss_pred hhhcCCCCCEEECCCCCcccch--------hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchh
Confidence 7888888888888888877433 3567778888888888887 677777776333777777777777 66777
Q ss_pred CCCCCC--CCEEeccCCCCCCCCCCCc---c--cccccceeccccccccccchhh-hcCCCCCCeEEeecCcCCCCCCCC
Q 001908 366 IGNLVN--LNLLGIEFNQLTGNIPREI---G--QLRNLQAIGLSSNFLQGNIPSS-LGNLTLMTDLFLSSNHLQGNIPPS 437 (997)
Q Consensus 366 ~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~ 437 (997)
+..++. |+.|+|++|++++.+|... . .+++|++|+|++|+++. +|.. +..+++|+.|+|++|+|+ .+|..
T Consensus 638 ~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~ 715 (876)
T 4ecn_A 638 FNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPEN 715 (876)
T ss_dssp CCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTT
T ss_pred hhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChH
Confidence 766654 7888888888877665322 2 33477778888887773 4444 447777778888877777 45544
Q ss_pred CCCC--------CCCcEEecCCCcccCCcccccc--cccccccccccCCCcccCCCccccccccccceeccccccccccc
Q 001908 438 LGNC--------KNLVSLNLSDNKLIGAVPQQIL--TITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 438 ~~~l--------~~L~~L~L~~N~l~~~~p~~~~--~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
+... ++|++|+|++|+++ .+|..+. .+++| +.|+|++|++++ +|..+.++++|+.|+|++|+
T Consensus 716 ~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~----- 787 (876)
T 4ecn_A 716 SLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQR----- 787 (876)
T ss_dssp SSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTCCEEECCCCB-----
T ss_pred HhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCCCEEECCCCC-----
Confidence 3322 26666666666666 5555554 55555 556666666654 45555555666666655544
Q ss_pred cccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCC
Q 001908 508 PVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFS 586 (997)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~ 586 (997)
++++|++.+.+|..|..+++|+.|+|++|+| +.+|..+. ++|+.|||++|++....+.. ....
T Consensus 788 -------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~ 851 (876)
T 4ecn_A 788 -------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYI 851 (876)
T ss_dssp -------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHH
T ss_pred -------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccc
Confidence 3345777778888888888888888888888 57777765 57888888888876544322 0111
Q ss_pred CCcceeecCCCCcC
Q 001908 587 NKTRVQLTGNGKLC 600 (997)
Q Consensus 587 ~~~~~~~~~N~~~C 600 (997)
......+.+|++.|
T Consensus 852 ~~~~~~L~~n~~~~ 865 (876)
T 4ecn_A 852 EAGMYVLLYDKTQD 865 (876)
T ss_dssp HTTCCEEECCTTSE
T ss_pred cchheeecCCCccc
Confidence 23445666666544
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.8e-57 Score=553.07 Aligned_cols=513 Identities=21% Similarity=0.229 Sum_probs=372.3
Q ss_pred CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhc
Q 001908 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVA 153 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l 153 (997)
..++.|||++|.+++..|..++++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..|..++++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46777777777777766777777777777777777777777777777777777887777777777777777777777777
Q ss_pred ccccccccccccccccccccceeecccccccCc-CcCccCcchhhhhhccCccccccCCCcccCCCccc--eeeccCCCC
Q 001908 154 YRNNLVGEIPEDIGYSWLKLEHISLARNHLTGM-LPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLE--NILLDVNGF 230 (997)
Q Consensus 154 ~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~-~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~--~L~L~~N~l 230 (997)
++|++.+.-|..+ ..+++|++|+|++|++++. +|..++.-++.+|++++|++++..|..++++++|+ .|++++|++
T Consensus 113 ~~n~i~~l~~~~~-~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGISSIDFIPL-HNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCSCGGGSCC-TTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcccCCcchh-ccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 7777775334443 3567777777777777763 34444422455677777777766666677777777 677777777
Q ss_pred CCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCC-----CcccccccccC--ccCeeEccCccC
Q 001908 231 TGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFT-----GKVSIIFGRLK--NLWSLDLGINNL 303 (997)
Q Consensus 231 ~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~~~~~~~l~--~L~~L~Ls~N~l 303 (997)
++..|.. + ...+|+.|++++|. .++..+..+.++....+..+.+. ...+..|.++. +|++|++++|++
T Consensus 192 ~~~~~~~-~-~~~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l 266 (606)
T 3t6q_A 192 AGIEPGA-F-DSAVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYF 266 (606)
T ss_dssp CEECTTT-T-TTCEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCC
T ss_pred CccChhH-h-hhccccccccCCch---hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCcc
Confidence 7544433 3 23567777777665 23333333433333333222222 22233444444 677888888888
Q ss_pred CCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCC
Q 001908 304 GSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLT 383 (997)
Q Consensus 304 ~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 383 (997)
+.+++. .+..+++|++|++++|+++ .+|..+..+ ++|+.|++++|.+++..|..+.++++|++|++++|.+.
T Consensus 267 ~~~~~~------~~~~l~~L~~L~l~~n~l~-~lp~~l~~l-~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~ 338 (606)
T 3t6q_A 267 FNISSN------TFHCFSGLQELDLTATHLS-ELPSGLVGL-STLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKR 338 (606)
T ss_dssp SSCCTT------TTTTCTTCSEEECTTSCCS-CCCSSCCSC-TTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSC
T ss_pred CccCHH------HhccccCCCEEeccCCccC-CCChhhccc-ccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcc
Confidence 766543 3567778888888888887 667777666 67888888888888777778888888888888888887
Q ss_pred CCCCCC-cccccccceeccccccccccc--hhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc
Q 001908 384 GNIPRE-IGQLRNLQAIGLSSNFLQGNI--PSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ 460 (997)
Q Consensus 384 ~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 460 (997)
+.+|.. +.++++|++|++++|++++.. |..+..+++|+.|++++|++++..|..|..+++|++|++++|++.+..|.
T Consensus 339 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 418 (606)
T 3t6q_A 339 LELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQ 418 (606)
T ss_dssp CBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTC
T ss_pred cccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccc
Confidence 666544 778888888888888888665 67788888888888888888877788888888888888888888776655
Q ss_pred c-cccccccccccccCCCcccCCCccccccccccceecccccccccc---ccccccCCcCccEEEccCccccccCChhcc
Q 001908 461 Q-ILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE---IPVTLTGCTGLEIFHMQGNSFRGSIPLSLR 536 (997)
Q Consensus 461 ~-~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 536 (997)
. +..++++ +.|++++|.+++..|..+..+++|++|++++|++++. .+..+..+++|+.|++++|++++.+|..|.
T Consensus 419 ~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 497 (606)
T 3t6q_A 419 SPFQNLHLL-KVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFT 497 (606)
T ss_dssp CTTTTCTTC-CEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTT
T ss_pred hhhhCcccC-CEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhc
Confidence 4 6677777 8888888888877788888888888888888888762 235678888888888888888877788888
Q ss_pred ccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCCC
Q 001908 537 SLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~ 602 (997)
.+++|+.|+|++|++++.+|..+..++.| +|+|++|++++.+|.. ..++.++.+++.+|||.|.|
T Consensus 498 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 498 SLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp TCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred cccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 88888888888888888888888888888 8888888888777654 45667788888888888865
No 7
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-57 Score=570.24 Aligned_cols=518 Identities=20% Similarity=0.234 Sum_probs=448.8
Q ss_pred CeeeeeeecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCC-CccCCCCCCCeEEEccCCCccccCCc
Q 001908 62 CQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEI-PKEIGFLFRLETLMLANNSFSGKIPT 140 (997)
Q Consensus 62 c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~iP~ 140 (997)
|.|..|-+ ...+++.|||++|.+++..|..+.++++|++|||++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 56888877 4578999999999999988999999999999999999888788 78899999999999999999988899
Q ss_pred cccCCCcccchhccccccccccccc-ccccccccceeecccccccCcCc-CccCcch-hhhhhccCccccccCCCcccCC
Q 001908 141 NLSSCSNLLSFVAYRNNLVGEIPED-IGYSWLKLEHISLARNHLTGMLP-ASIGNLS-IIYLHVGENQFSGTVPPSLYNM 217 (997)
Q Consensus 141 ~l~~l~~L~~l~l~~n~~~g~ip~~-~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l 217 (997)
.++++++|++|++++|++.+.+|.. .+..+++|++|+|++|.+++..| ..|++++ +.+|++++|++++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999987765 34578999999999999998765 5788884 6689999999999999999988
Q ss_pred --CccceeeccCCCCCCCCCccccccCC------CccEEEecCCcCcCCCCCCCCCC---CCCcEEecc---------Cc
Q 001908 218 --SSLENILLDVNGFTGNLPLDIGVTLP------NLQVFAIGDNYFSGSIPESFSNA---SNIEIIDLP---------IN 277 (997)
Q Consensus 218 --~~L~~L~L~~N~l~g~lp~~~~~~l~------~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls---------~N 277 (997)
++|+.|+|+.|.+++.+|..++ .++ .|+.|++++|.+++.+|..+... ++++.|+++ .|
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~-~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~ 250 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWG-KCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFH 250 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCC-SSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCS
T ss_pred cCCccceEECCCCccccccccchh-hcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccc
Confidence 8999999999999998887754 333 39999999999999998877654 678888877 34
Q ss_pred cCCCccccccccc--CccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccC
Q 001908 278 YFTGKVSIIFGRL--KNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGV 355 (997)
Q Consensus 278 ~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~ 355 (997)
.+.+.....|.++ ++|+.|+|++|.+..+.+ ..+..+++|++|+|++|++++..|..|..+ ++|+.|++++
T Consensus 251 ~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~------~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l-~~L~~L~Ls~ 323 (844)
T 3j0a_A 251 NIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNS------RVFETLKDLKVLNLAYNKINKIADEAFYGL-DNLQVLNLSY 323 (844)
T ss_dssp SSTTGGGTTTTTTTTSCCCEEECTTCCCCEECS------CCSSSCCCCCEEEEESCCCCEECTTTTTTC-SSCCEEEEES
T ss_pred ccCCCChhhhhccccCCccEEECCCCcccccCh------hhhhcCCCCCEEECCCCcCCCCChHHhcCC-CCCCEEECCC
Confidence 5555556667665 789999999999987543 356789999999999999999889888887 6899999999
Q ss_pred cccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCC
Q 001908 356 NQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIP 435 (997)
Q Consensus 356 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 435 (997)
|.+++..|..|.++++|++|++++|++++..+..|.++++|++|+|++|.+++ ++ .+++|+.|++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~-i~----~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTT-IH----FIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCC-CS----SCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCc-cc----CCCCcchhccCCCCcc-ccc
Confidence 99998889999999999999999999998888899999999999999999984 33 3889999999999999 566
Q ss_pred CCCCCCCCCcEEecCCCcccCCc-ccccccccccccccccCCCcccCCCcc-ccccccccceecccccccc-----cccc
Q 001908 436 PSLGNCKNLVSLNLSDNKLIGAV-PQQILTITTLSRFLDLGNNHLNGSLPL-EVGNLKNLVALYISGNQFS-----GEIP 508 (997)
Q Consensus 436 ~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~ll~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p 508 (997)
.. ..+++.|++++|++++.- +..+..++++ +.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|
T Consensus 398 ~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~ 473 (844)
T 3j0a_A 398 KI---NLTANLIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCW 473 (844)
T ss_dssp CC---CTTCCEEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCS
T ss_pred cc---ccccceeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccccccccch
Confidence 54 467999999999998532 2334578888 9999999999965543 4567899999999999997 4455
Q ss_pred ccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCC
Q 001908 509 VTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNK 588 (997)
Q Consensus 509 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~ 588 (997)
..|.++++|+.|+|++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++.+|.. +.++
T Consensus 474 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L 549 (844)
T 3j0a_A 474 DVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSL 549 (844)
T ss_dssp SCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSC
T ss_pred hhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCc
Confidence 6789999999999999999999999999999999999999999987777776 89999999999999998865 7789
Q ss_pred cceeecCCCCcCCCC
Q 001908 589 TRVQLTGNGKLCGGS 603 (997)
Q Consensus 589 ~~~~~~~N~~~C~~~ 603 (997)
..+++.||||.|+|.
T Consensus 550 ~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 550 SVLDITHNKFICECE 564 (844)
T ss_dssp CEEEEEEECCCCSSS
T ss_pred CEEEecCCCcccccc
Confidence 999999999999774
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.8e-57 Score=549.24 Aligned_cols=507 Identities=18% Similarity=0.201 Sum_probs=432.2
Q ss_pred EeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccc
Q 001908 79 LDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNL 158 (997)
Q Consensus 79 L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~ 158 (997)
+|.++.+++ .+|..+.. .+++|||++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|++
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 444555554 56766654 789999999999988899999999999999999999988899999999999999999999
Q ss_pred cccccccccccccccceeecccccccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCcc
Q 001908 159 VGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLD 237 (997)
Q Consensus 159 ~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~ 237 (997)
.+..|..+. .+++|++|+|++|++++..|..++++. +.+|++++|++++.-++.+..+++|++|+|++|++++ ++..
T Consensus 94 ~~~~~~~~~-~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~ 171 (606)
T 3t6q_A 94 IFMAETALS-GPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHY-LSKE 171 (606)
T ss_dssp SEECTTTTS-SCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCE-ECHH
T ss_pred cccChhhhc-ccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccc-cChh
Confidence 977777665 689999999999999987788888884 6679999999987444445558999999999999984 4444
Q ss_pred ccccCCCcc--EEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhh
Q 001908 238 IGVTLPNLQ--VFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVT 315 (997)
Q Consensus 238 ~~~~l~~L~--~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 315 (997)
.+..+++|+ .|++++|.+++..|..|.. .+|+.|++++|. ..+..+..+.++....+..+.+.......+. ..
T Consensus 172 ~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~-~~L~~L~l~~~~---~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~-~~ 246 (606)
T 3t6q_A 172 DMSSLQQATNLSLNLNGNDIAGIEPGAFDS-AVFQSLNFGGTQ---NLLVIFKGLKNSTIQSLWLGTFEDMDDEDIS-PA 246 (606)
T ss_dssp HHHTTTTCCSEEEECTTCCCCEECTTTTTT-CEEEEEECTTCS---CHHHHHHHTTTCEEEEEECCCCTTSCCCCCC-GG
T ss_pred hhhhhcccceeEEecCCCccCccChhHhhh-ccccccccCCch---hHHHHhhhccccchhheechhhccccccccC-hh
Confidence 445788888 8899999999877777655 589999999887 4566677777777666665555443322221 12
Q ss_pred hhccCC--CCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccc
Q 001908 316 ILTNCS--KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQL 393 (997)
Q Consensus 316 ~l~~l~--~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 393 (997)
.+..+. +|+.|++++|.+++..+..|..+ ++|+.|++++|+++ .+|..+.++++|++|++++|++++..|..+.++
T Consensus 247 ~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l 324 (606)
T 3t6q_A 247 VFEGLCEMSVESINLQKHYFFNISSNTFHCF-SGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNF 324 (606)
T ss_dssp GGGGGGGSEEEEEECTTCCCSSCCTTTTTTC-TTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGC
T ss_pred HhchhhcCceeEEEeecCccCccCHHHhccc-cCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhcc
Confidence 333333 79999999999998888888887 78999999999999 789999999999999999999999889999999
Q ss_pred cccceeccccccccccchh-hhcCCCCCCeEEeecCcCCCCC--CCCCCCCCCCcEEecCCCcccCCccccccccccccc
Q 001908 394 RNLQAIGLSSNFLQGNIPS-SLGNLTLMTDLFLSSNHLQGNI--PPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSR 470 (997)
Q Consensus 394 ~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~ 470 (997)
++|++|++++|.+.+.+|. .+..+++|+.|++++|++++.. |..+.++++|++|++++|++.+..|..+..++++ +
T Consensus 325 ~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~ 403 (606)
T 3t6q_A 325 PSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQL-E 403 (606)
T ss_dssp TTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTC-S
T ss_pred CcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccC-C
Confidence 9999999999999977765 4999999999999999999766 8889999999999999999998889999999998 9
Q ss_pred ccccCCCcccCCCccc-cccccccceeccccccccccccccccCCcCccEEEccCcccccc---CChhccccCcCCeeeC
Q 001908 471 FLDLGNNHLNGSLPLE-VGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS---IPLSLRSLKSIKELDL 546 (997)
Q Consensus 471 ~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L 546 (997)
.|++++|++++..|.. +..+++|+.|++++|.+++..|..+.++++|++|++++|++++. .+..+..+++|+.|+|
T Consensus 404 ~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~L 483 (606)
T 3t6q_A 404 LLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVL 483 (606)
T ss_dssp EEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEEC
T ss_pred eEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEEC
Confidence 9999999999877654 89999999999999999999999999999999999999999873 3467999999999999
Q ss_pred ccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCc
Q 001908 547 SCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKL 599 (997)
Q Consensus 547 s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 599 (997)
++|++++.+|..|..+++|++|+|++|++++.+|.. ..+..+ .+++.+|...
T Consensus 484 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~ 536 (606)
T 3t6q_A 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHIS 536 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCC
T ss_pred CCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCccc
Confidence 999999999999999999999999999999988754 556677 8888999654
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=8.7e-57 Score=547.01 Aligned_cols=524 Identities=18% Similarity=0.197 Sum_probs=379.7
Q ss_pred CCCeee----eeeecCC---------CCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeE
Q 001908 60 NLCQWA----GVTCGHR---------HQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLET 126 (997)
Q Consensus 60 ~~c~w~----gv~C~~~---------~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 126 (997)
+.|.|. .|.|... ..+++.|+|++|.+.+..+..++++++|++|||++|++++..|.+|+++++|++
T Consensus 5 ~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~ 84 (606)
T 3vq2_A 5 NPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSN 84 (606)
T ss_dssp -CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCE
Confidence 456663 4667531 356888888888887777778888888888888888888777778888888888
Q ss_pred EEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccC-cCcCccCcch-hhhhhccCc
Q 001908 127 LMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTG-MLPASIGNLS-IIYLHVGEN 204 (997)
Q Consensus 127 L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~-~~~L~l~~N 204 (997)
|+|++|.+++..|..|+++++|++|++++|++.+..|..+ ..+++|++|+|++|.+++ .+|..+++++ +.+|++++|
T Consensus 85 L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 85 LILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPI-GQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCC-TTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred eECCCCcccccChhhcCCcccCCEEEccCCcccccccccc-CCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 8888888887778888888888888888888775444544 457788888888888875 5688787774 556888888
Q ss_pred cccccCCCcccCCCccc----eeeccCCCCCCCCCccccccCCCccEEEecCCcCc-CCCCCCCCCCCCCcEEeccCccC
Q 001908 205 QFSGTVPPSLYNMSSLE----NILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFS-GSIPESFSNASNIEIIDLPINYF 279 (997)
Q Consensus 205 ~l~g~ip~~l~~l~~L~----~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l 279 (997)
++++..|..++.+++|+ +|++++|.++ .+|...+... +|+.|++++|.++ +.+|..+.++++|+.+++..+.+
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~ 241 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEF 241 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECC
T ss_pred cceecChhhhhhhhccccccceeeccCCCcc-eeCcccccCc-eeeeeeccCCccchhHHHHHhcccccccccccccccc
Confidence 88877777777777665 6888888887 5666665433 7888888888776 45666777777777777755444
Q ss_pred CCc------ccccccccCc--cCeeEc-cCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCccccccccccccc
Q 001908 280 TGK------VSIIFGRLKN--LWSLDL-GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTD 350 (997)
Q Consensus 280 ~~~------~~~~~~~l~~--L~~L~L-s~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~ 350 (997)
.+. .+..+.++.. ++.+++ ..|.+... .+ .+..+++|+.|++++|.+.. +| .+..+ ++|+.
T Consensus 242 ~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~------~~-~~~~l~~L~~L~l~~~~~~~-l~-~l~~~-~~L~~ 311 (606)
T 3vq2_A 242 KDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDD------IV-KFHCLANVSAMSLAGVSIKY-LE-DVPKH-FKWQS 311 (606)
T ss_dssp TTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGG------GG-SCGGGTTCSEEEEESCCCCC-CC-CCCTT-CCCSE
T ss_pred ccCCcccccChHHhhhhhhccHhheecccccccccc------cc-ccccCCCCCEEEecCccchh-hh-hcccc-ccCCE
Confidence 321 1222222222 333444 34444331 22 26677778888888888763 44 55555 56788
Q ss_pred ccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccccccccc--chhhhcCCCCCCeEEeecC
Q 001908 351 IYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGN--IPSSLGNLTLMTDLFLSSN 428 (997)
Q Consensus 351 L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N 428 (997)
|++++|.+ +.+| .+ .+++|+.|++++|+..+.+ .+..+++|++|+|++|++++. +|..+..+++|+.|+|++|
T Consensus 312 L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n 386 (606)
T 3vq2_A 312 LSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFN 386 (606)
T ss_dssp EEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSC
T ss_pred EEcccccC-cccc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCC
Confidence 88888888 5677 44 7788888888888655433 566778888888888888765 3777788888888888888
Q ss_pred cCCCCCCCCCCCCCCCcEEecCCCcccCCcc-cccccccccccccccCCCcccCCCccccccccccceeccccccccc-c
Q 001908 429 HLQGNIPPSLGNCKNLVSLNLSDNKLIGAVP-QQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSG-E 506 (997)
Q Consensus 429 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~ 506 (997)
.+++ +|..|..+++|++|++++|++.+..| ..+..++++ +.|++++|++++..|..+.++++|++|++++|++++ .
T Consensus 387 ~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 464 (606)
T 3vq2_A 387 GAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKL-LYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNT 464 (606)
T ss_dssp SEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred cccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccC-CEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcc
Confidence 8774 56777888888888888888877666 567777777 788888888887778888888888888888888876 3
Q ss_pred ccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCC
Q 001908 507 IPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFS 586 (997)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~ 586 (997)
+|..|..+++|+.|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+..+++|++|+|++|+++..++....++
T Consensus 465 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~ 544 (606)
T 3vq2_A 465 LSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFP 544 (606)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSC
T ss_pred hHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhc
Confidence 67778888888888888888887777788888888888888888887778888888888888888888875444334454
Q ss_pred -CCcceeecCCCCcCCCC
Q 001908 587 -NKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 587 -~~~~~~~~~N~~~C~~~ 603 (997)
+++.+++.+|||.|+|.
T Consensus 545 ~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 545 KSLAFFNLTNNSVACICE 562 (606)
T ss_dssp TTCCEEECCSCCCCCSST
T ss_pred ccCcEEEccCCCcccCCc
Confidence 47778888888888764
No 10
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.9e-55 Score=541.00 Aligned_cols=499 Identities=19% Similarity=0.220 Sum_probs=386.2
Q ss_pred cEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcc
Q 001908 75 RVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAY 154 (997)
Q Consensus 75 ~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~ 154 (997)
+++.|+|++|.+++..+.+++++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|+++
T Consensus 74 ~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 153 (680)
T 1ziw_A 74 MLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLS 153 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECC
T ss_pred CcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEcc
Confidence 45666666666654333356666666666666666665555566666666666666666666666666666666666666
Q ss_pred ccccccccccccc-ccccccceeecccccccCcCcCccCcc----------------------------hhhhhhccCcc
Q 001908 155 RNNLVGEIPEDIG-YSWLKLEHISLARNHLTGMLPASIGNL----------------------------SIIYLHVGENQ 205 (997)
Q Consensus 155 ~n~~~g~ip~~~~-~~l~~L~~L~L~~N~l~g~~p~~~~~l----------------------------~~~~L~l~~N~ 205 (997)
+|++.+..|..+. ..+++|++|++++|.+++..|..++.+ ++.+|++++|+
T Consensus 154 ~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~ 233 (680)
T 1ziw_A 154 NNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQ 233 (680)
T ss_dssp SSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSC
T ss_pred CCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCc
Confidence 6666655444432 134566677777776666666554432 13345666777
Q ss_pred ccccCCCcccCCCc--cceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCc-
Q 001908 206 FSGTVPPSLYNMSS--LENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGK- 282 (997)
Q Consensus 206 l~g~ip~~l~~l~~--L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~- 282 (997)
+++..|..+.+++. |++|+|++|++++..|.. +..+++|++|++++|++++..|..|.++++|++|+|++|...+.
T Consensus 234 l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~ 312 (680)
T 1ziw_A 234 LSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDS-FAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312 (680)
T ss_dssp CCEECTTTTGGGGGSCCCEEECTTSCCCEECTTT-TTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC--
T ss_pred ccccChhHhhccCcCCCCEEECCCCCcCccCccc-ccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccc
Confidence 77666777776654 777777777777444433 34677777777777777777777777777777777777655432
Q ss_pred ----cc----ccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCC--cccccccc-cccccc
Q 001908 283 ----VS----IIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVL--PHSIANLS-TTMTDI 351 (997)
Q Consensus 283 ----~~----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~--p~~~~~l~-~~L~~L 351 (997)
+| ..|+.+++|++|++++|+++.+.+ ..+.++++|++|++++|.+.... +..+..+. ..|+.|
T Consensus 313 ~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~------~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L 386 (680)
T 1ziw_A 313 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKS------NMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHIL 386 (680)
T ss_dssp ----CCEECTTTTTTCTTCCEEECCSCCBCCCCT------TTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEE
T ss_pred ccccccccChhhcccCCCCCEEECCCCccCCCCh------hHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceE
Confidence 22 267788888999999998887654 35678999999999999865332 22333322 479999
Q ss_pred cccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC-CCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcC
Q 001908 352 YMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP-REIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHL 430 (997)
Q Consensus 352 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 430 (997)
++++|++++..|.+|.++++|++|+|++|++++.+| ..|.++++|++|+|++|++++..+..|..+++|+.|++++|.+
T Consensus 387 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l 466 (680)
T 1ziw_A 387 NLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVAL 466 (680)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCC
T ss_pred ECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccc
Confidence 999999999999999999999999999999998766 6899999999999999999999999999999999999999999
Q ss_pred C--CCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCc--------cccccccccceecccc
Q 001908 431 Q--GNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLP--------LEVGNLKNLVALYISG 500 (997)
Q Consensus 431 ~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p--------~~~~~l~~L~~L~Ls~ 500 (997)
+ +.+|..|.++++|++|+|++|++++..|..+..++++ ++|+|++|++++..+ ..|.++++|+.|+|++
T Consensus 467 ~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~ 545 (680)
T 1ziw_A 467 KNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLES 545 (680)
T ss_dssp BCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCS
T ss_pred cccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCC
Confidence 7 5789999999999999999999997777788899998 999999999986422 2478999999999999
Q ss_pred ccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhcc-CCCCCCEEeCCCCcCcccC
Q 001908 501 NQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLE-NLSFLEYLNLSYNHFDGEV 579 (997)
Q Consensus 501 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~ 579 (997)
|+++...+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|+|++..|..+. .+++|+.|++++|++.+.+
T Consensus 546 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 546 NGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 999954455799999999999999999977777889999999999999999998888887 7899999999999999988
Q ss_pred CC
Q 001908 580 PT 581 (997)
Q Consensus 580 p~ 581 (997)
+.
T Consensus 626 ~~ 627 (680)
T 1ziw_A 626 ES 627 (680)
T ss_dssp CC
T ss_pred cc
Confidence 75
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.4e-55 Score=536.48 Aligned_cols=505 Identities=18% Similarity=0.155 Sum_probs=439.0
Q ss_pred EEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccc
Q 001908 77 TELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRN 156 (997)
Q Consensus 77 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n 156 (997)
+.++.++++++ .+|..+. ++|++|||++|++++..|..|+++++|++|+|++|.+++..|..|+++++|++|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n 90 (606)
T 3vq2_A 14 ITYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGN 90 (606)
T ss_dssp TEEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred CceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCC
Confidence 46899999985 5777665 89999999999999888889999999999999999999877889999999999999999
Q ss_pred cccccccccccccccccceeecccccccCcCcCccCcch-hhhhhccCccccc-cCCCcccCCCccceeeccCCCCCCCC
Q 001908 157 NLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSG-TVPPSLYNMSSLENILLDVNGFTGNL 234 (997)
Q Consensus 157 ~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~l 234 (997)
++.+..|..+. .+++|++|+|++|.+++..|..++++. +++|++++|++++ .+|..++++++|++|+|++|++++..
T Consensus 91 ~l~~~~p~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~ 169 (606)
T 3vq2_A 91 PIQSFSPGSFS-GLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTIT 169 (606)
T ss_dssp CCCCCCTTSST-TCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEEC
T ss_pred cccccChhhcC-CcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecC
Confidence 99977777765 689999999999999988888899985 6789999999986 68999999999999999999999655
Q ss_pred CccccccCCCc----cEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCC-CcccccccccCccCeeEccCccCCCCCCC
Q 001908 235 PLDIGVTLPNL----QVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFT-GKVSIIFGRLKNLWSLDLGINNLGSGGAN 309 (997)
Q Consensus 235 p~~~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 309 (997)
|..+. .+++| +.|++++|.+++..+..+... +|++|+|++|.++ +..+..++.+++|+.+++..+.+.....-
T Consensus 170 ~~~~~-~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l 247 (606)
T 3vq2_A 170 VNDLQ-FLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNL 247 (606)
T ss_dssp TTTTH-HHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCC
T ss_pred hhhhh-hhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcc
Confidence 55443 55554 489999999997766666665 8999999999998 56788899999999999987766542211
Q ss_pred ---CcchhhhhccCCCCcEEEe-ecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC
Q 001908 310 ---DLDFVTILTNCSKLKVLAF-EENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN 385 (997)
Q Consensus 310 ---~~~~~~~l~~l~~L~~L~L-~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 385 (997)
....+..+..+ +++.+++ ..|.+.+.+|. +..+ ++|+.|++++|.++ .+| .+..+++|+.|++++|++ +.
T Consensus 248 ~~~~~~~~~~l~~l-~l~~l~l~~~~~~~~~~~~-~~~l-~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~ 321 (606)
T 3vq2_A 248 EIFEPSIMEGLCDV-TIDEFRLTYTNDFSDDIVK-FHCL-ANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQ 321 (606)
T ss_dssp SCCCGGGGTTGGGS-EEEEEEECCCTTCCGGGGS-CGGG-TTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SS
T ss_pred cccChHHhhhhhhc-cHhheeccccccccccccc-cccC-CCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cc
Confidence 11122333333 5677888 78899988888 6666 78999999999997 566 899999999999999999 67
Q ss_pred CCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCC--CCCCCCCCCCCcEEecCCCcccCCcccccc
Q 001908 386 IPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGN--IPPSLGNCKNLVSLNLSDNKLIGAVPQQIL 463 (997)
Q Consensus 386 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 463 (997)
+| .+ .+++|++|++++|+..+.+ .+..+++|++|++++|++++. +|..+..+++|++|++++|.++ .+|..+.
T Consensus 322 lp-~~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~ 396 (606)
T 3vq2_A 322 FP-TL-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAI-IMSANFM 396 (606)
T ss_dssp CC-CC-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEE-EECCCCT
T ss_pred cc-cC-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccc-cchhhcc
Confidence 88 55 9999999999999766544 688999999999999999876 4888999999999999999998 5788899
Q ss_pred cccccccccccCCCcccCCCc-cccccccccceeccccccccccccccccCCcCccEEEccCccccc-cCChhccccCcC
Q 001908 464 TITTLSRFLDLGNNHLNGSLP-LEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG-SIPLSLRSLKSI 541 (997)
Q Consensus 464 ~l~~ll~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L 541 (997)
.++++ +.|++++|++++..| ..+..+++|++|++++|++++..|..+.++++|+.|++++|++++ .+|..++.+++|
T Consensus 397 ~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 475 (606)
T 3vq2_A 397 GLEEL-QHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL 475 (606)
T ss_dssp TCTTC-CEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred CCCCC-CeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC
Confidence 99998 999999999998888 689999999999999999999999999999999999999999998 479999999999
Q ss_pred CeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCc
Q 001908 542 KELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKL 599 (997)
Q Consensus 542 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~ 599 (997)
+.|+|++|++++.+|..+..+++|++|+|++|++++.+|.. ..+++++.+++.+|..-
T Consensus 476 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 476 TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 99999999999999999999999999999999999987754 66788999999999754
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-53 Score=532.68 Aligned_cols=488 Identities=20% Similarity=0.194 Sum_probs=427.8
Q ss_pred CCcEEEEeccCCCCCCcc-cccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCcc--ccCCCccc
Q 001908 73 HQRVTELDLRHQNIGGSL-SPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTN--LSSCSNLL 149 (997)
Q Consensus 73 ~~~v~~L~L~~~~l~g~~-~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~--l~~l~~L~ 149 (997)
-.+++.|||++|...+.+ |.++++|++|++|+|++|++++..|..|+++++|++|+|++|.+++.+|.. ++++++|+
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 357999999999888888 668999999999999999999999999999999999999999999988876 99999999
Q ss_pred chhcccccccccccccccccccccceeecccccccCcCcCccCcc---hhhhhhccCccccccCCCcccCCCc------c
Q 001908 150 SFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL---SIIYLHVGENQFSGTVPPSLYNMSS------L 220 (997)
Q Consensus 150 ~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l---~~~~L~l~~N~l~g~ip~~l~~l~~------L 220 (997)
+|++++|++.+..|...+..+++|++|+|++|.+++..|..++.+ ++.+|++++|.+.+.+|..++++.+ |
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 999999999987776555679999999999999999999999876 4667999999999999998888776 9
Q ss_pred ceeeccCCCCCCCCCccccccC--CCccEEEecC---------CcCcCCCCCCCCCC--CCCcEEeccCccCCCcccccc
Q 001908 221 ENILLDVNGFTGNLPLDIGVTL--PNLQVFAIGD---------NYFSGSIPESFSNA--SNIEIIDLPINYFTGKVSIIF 287 (997)
Q Consensus 221 ~~L~L~~N~l~g~lp~~~~~~l--~~L~~L~L~~---------N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~ 287 (997)
+.|+|++|.+++.+|..+...+ +.++.|.+++ |.+.+..+..|..+ ++|+.|+|++|.+++..+..|
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~ 286 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVF 286 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCS
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhh
Confidence 9999999999999998876543 5688888773 44555556667765 789999999999999999999
Q ss_pred cccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCC
Q 001908 288 GRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIG 367 (997)
Q Consensus 288 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~ 367 (997)
+.+++|++|+|++|+++.+.+ ..+.++++|++|+|++|++++..|..+..+ ++|+.|++++|+|++..+..|.
T Consensus 287 ~~l~~L~~L~L~~n~i~~~~~------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~L~~N~i~~~~~~~~~ 359 (844)
T 3j0a_A 287 ETLKDLKVLNLAYNKINKIAD------EAFYGLDNLQVLNLSYNLLGELYSSNFYGL-PKVAYIDLQKNHIAIIQDQTFK 359 (844)
T ss_dssp SSCCCCCEEEEESCCCCEECT------TTTTTCSSCCEEEEESCCCSCCCSCSCSSC-TTCCEEECCSCCCCCCCSSCSC
T ss_pred hcCCCCCEEECCCCcCCCCCh------HHhcCCCCCCEEECCCCCCCccCHHHhcCC-CCCCEEECCCCCCCccChhhhc
Confidence 999999999999999987644 356789999999999999999999999988 6899999999999988889999
Q ss_pred CCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCC-CCCCCCCCCcE
Q 001908 368 NLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIP-PSLGNCKNLVS 446 (997)
Q Consensus 368 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~ 446 (997)
++++|++|+|++|.+++. + .+++|+.|++++|+++ .+|.. ..+++.|++++|++++... ..+.++++|++
T Consensus 360 ~l~~L~~L~Ls~N~l~~i-~----~~~~L~~L~l~~N~l~-~l~~~---~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~ 430 (844)
T 3j0a_A 360 FLEKLQTLDLRDNALTTI-H----FIPSIPDIFLSGNKLV-TLPKI---NLTANLIHLSENRLENLDILYFLLRVPHLQI 430 (844)
T ss_dssp SCCCCCEEEEETCCSCCC-S----SCCSCSEEEEESCCCC-CCCCC---CTTCCEEECCSCCCCSSTTHHHHTTCTTCCE
T ss_pred CCCCCCEEECCCCCCCcc-c----CCCCcchhccCCCCcc-ccccc---ccccceeecccCccccCchhhhhhcCCccce
Confidence 999999999999999853 2 3789999999999999 56654 5689999999999996422 23568999999
Q ss_pred EecCCCcccCCccc-ccccccccccccccCCCccc-----CCCccccccccccceeccccccccccccccccCCcCccEE
Q 001908 447 LNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLN-----GSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIF 520 (997)
Q Consensus 447 L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 520 (997)
|+|++|++++..+. .+..++++ +.|+|++|.++ +..|..|.++++|+.|+|++|++++..|..|.++++|+.|
T Consensus 431 L~Ls~N~l~~~~~~~~~~~~~~L-~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 509 (844)
T 3j0a_A 431 LILNQNRFSSCSGDQTPSENPSL-EQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGL 509 (844)
T ss_dssp EEEESCCCCCCCSSSSSCSCTTC-CBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEE
T ss_pred eeCCCCcccccccccccccCCcc-ccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhhee
Confidence 99999999865544 34456677 99999999997 4556778999999999999999999999999999999999
Q ss_pred EccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 521 HMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 521 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
+|++|+|++..|..+. ++|+.|||++|+|++.+|..| .+|+.|++++|++.+.++..
T Consensus 510 ~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 510 SLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELS 566 (844)
T ss_dssp EEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCC
T ss_pred ECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccH
Confidence 9999999987777776 899999999999999999776 47899999999999988753
No 13
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.9e-52 Score=501.04 Aligned_cols=486 Identities=17% Similarity=0.192 Sum_probs=293.8
Q ss_pred CCeeeeeeecCCC-----------CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEc
Q 001908 61 LCQWAGVTCGHRH-----------QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLML 129 (997)
Q Consensus 61 ~c~w~gv~C~~~~-----------~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 129 (997)
.|.|.|| |+-.. .+++.|||++|.+++..|.+++++++|++|+|++|++++..|..|+.+++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4999998 86421 25666666666666655666666666666666666666666666666666666666
Q ss_pred cCCCccccCCccccCCCcccchhcccccccc-cccccccccccccceeecccccccCcCc-CccCcch-hhhhhccCccc
Q 001908 130 ANNSFSGKIPTNLSSCSNLLSFVAYRNNLVG-EIPEDIGYSWLKLEHISLARNHLTGMLP-ASIGNLS-IIYLHVGENQF 206 (997)
Q Consensus 130 s~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g-~ip~~~~~~l~~L~~L~L~~N~l~g~~p-~~~~~l~-~~~L~l~~N~l 206 (997)
++|.+++..|..++++++|++|++++|++.+ .+|..+. .+++|++|++++|.+.+.+| ..++.++ +.+|++++|++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFP-NLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCT-TCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhh-ccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 6666665544556666666666666666654 3444332 45666666666666444444 3555553 44566666666
Q ss_pred cccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCC--C-CCCCCCCCCcEEeccCccCCCcc
Q 001908 207 SGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSI--P-ESFSNASNIEIIDLPINYFTGKV 283 (997)
Q Consensus 207 ~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~L~~L~Ls~N~l~~~~ 283 (997)
++.+|..+.++++|++|+++.|.+. .+|..++..+++|++|++++|++++.. | .....+++|+.|++++|++++..
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 6666666666666666666666654 455555555666666666666666532 1 12334556666666666665543
Q ss_pred cc----cccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccc
Q 001908 284 SI----IFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQIS 359 (997)
Q Consensus 284 ~~----~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~ 359 (997)
+. .+..+++|+.|++++|.+..++.-.......+..+.+|+.|++.++.+..... +.
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~--~~----------------- 300 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL--FY----------------- 300 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG--SC-----------------
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh--cc-----------------
Confidence 32 23445566666666665544322111111233445555555555554432100 00
Q ss_pred cccCCCCCCCCCCCEEeccCCCCCCCCCCCc-ccccccceeccccccccccchh---hhcCCCCCCeEEeecCcCCCCCC
Q 001908 360 GTIPSGIGNLVNLNLLGIEFNQLTGNIPREI-GQLRNLQAIGLSSNFLQGNIPS---SLGNLTLMTDLFLSSNHLQGNIP 435 (997)
Q Consensus 360 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p 435 (997)
.++..+....+|+.|++++|+++ .+|..+ .++++|++|+|++|++++.+|. .++.+++|+.|+|++|++++..+
T Consensus 301 -~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 378 (549)
T 2z81_A 301 -DLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQK 378 (549)
T ss_dssp -CCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHH
T ss_pred -cchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCccccccc
Confidence 01111122345666666666665 444444 3566666666666666655543 25566666666666666664322
Q ss_pred --CCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccC
Q 001908 436 --PSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTG 513 (997)
Q Consensus 436 --~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (997)
..+..+++|++|++++|+++ .+|..+..++++ ++|++++|+++ .+|..+ .++|++|+|++|++++.+ ..
T Consensus 379 ~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L-~~L~Ls~N~l~-~l~~~~--~~~L~~L~Ls~N~l~~~~----~~ 449 (549)
T 2z81_A 379 TGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKM-RFLNLSSTGIR-VVKTCI--PQTLEVLDVSNNNLDSFS----LF 449 (549)
T ss_dssp HHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTC-CEEECTTSCCS-CCCTTS--CTTCSEEECCSSCCSCCC----CC
T ss_pred chhhhhcCCCCCEEECCCCCCc-cCChhhcccccc-cEEECCCCCcc-cccchh--cCCceEEECCCCChhhhc----cc
Confidence 34566666666666666665 566666666665 66666666665 333333 257788888888887543 46
Q ss_pred CcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCC
Q 001908 514 CTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 514 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
+++|++|+|++|+|+ .+|. ...+++|+.|||++|+|++.+|..+..+++|+.|++++|+++|.+|.
T Consensus 450 l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 450 LPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp CTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 778888888888887 5665 46678888888888888887777788888888888888888887774
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1e-50 Score=490.03 Aligned_cols=509 Identities=18% Similarity=0.193 Sum_probs=398.1
Q ss_pred CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhc
Q 001908 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVA 153 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l 153 (997)
.+++.|||++|++++..+.++.++++|++|||++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46788888888887777777888888888888888888766777888888888888888888666677888888888888
Q ss_pred ccccccccccccccccccccceeecccccccC-cCcCccCcch-hhhhhccCccccccCCCcccCCCcc----ceeeccC
Q 001908 154 YRNNLVGEIPEDIGYSWLKLEHISLARNHLTG-MLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSL----ENILLDV 227 (997)
Q Consensus 154 ~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g-~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L----~~L~L~~ 227 (997)
++|++.+ +|...+..+++|++|+|++|.+++ .+|..+++++ +++|++++|++++..|..++++++| +.|++++
T Consensus 108 ~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 108 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TTSCCCC-STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccc-CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 8887764 343223467788888888888776 4677777774 5567777777777667777777777 6777777
Q ss_pred CCCCCCCCccccccCCCccEEEecCCcCcC-CCCCCCCCCCCCcEEeccCccCC------CcccccccccCc--cCeeEc
Q 001908 228 NGFTGNLPLDIGVTLPNLQVFAIGDNYFSG-SIPESFSNASNIEIIDLPINYFT------GKVSIIFGRLKN--LWSLDL 298 (997)
Q Consensus 228 N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~------~~~~~~~~~l~~--L~~L~L 298 (997)
|.+++ ++...+... +|+.|++++|.... .+|..+..+++++.+++..+.+. ......|.++.+ ++.+++
T Consensus 187 n~l~~-~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 264 (570)
T 2z63_A 187 NPMNF-IQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRL 264 (570)
T ss_dssp CCCCE-ECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEE
T ss_pred CCcee-cCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhh
Confidence 77774 333344333 67777777775432 34455666666666665543322 222334444443 456666
Q ss_pred cCc-cCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEec
Q 001908 299 GIN-NLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGI 377 (997)
Q Consensus 299 s~N-~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 377 (997)
++| .+... .+..+..+++|++|++++|.++ .+|..+..+ .|+.|++++|.++ .+|. ..+++|+.|++
T Consensus 265 ~~~~~~~~~------~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l 332 (570)
T 2z63_A 265 AYLDYYLDD------IIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPT--LKLKSLKRLTF 332 (570)
T ss_dssp EETTEEESC------STTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCB--CBCSSCCEEEE
T ss_pred hcchhhhhh------chhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCc--ccccccCEEeC
Confidence 666 44332 2345678899999999999998 578777776 7999999999998 5565 57889999999
Q ss_pred cCCCCCCCCCCCcccccccceeccccccccccc--hhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCccc
Q 001908 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNI--PSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 378 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 455 (997)
++|.+.+..+. ..+++|++|++++|++++.. |..+.++++|++|++++|++++..+. +..+++|++|++++|.+.
T Consensus 333 ~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~ 409 (570)
T 2z63_A 333 TSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLK 409 (570)
T ss_dssp ESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEE
T ss_pred cCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccc
Confidence 99999877765 78999999999999998654 78899999999999999999965444 999999999999999998
Q ss_pred CCcc-cccccccccccccccCCCcccCCCccccccccccceecccccccc-ccccccccCCcCccEEEccCccccccCCh
Q 001908 456 GAVP-QQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFS-GEIPVTLTGCTGLEIFHMQGNSFRGSIPL 533 (997)
Q Consensus 456 ~~~p-~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (997)
+..| ..+..++++ ++|++++|++++..|..|.++++|++|++++|+++ +.+|..+..+++|+.|++++|++++..|.
T Consensus 410 ~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~ 488 (570)
T 2z63_A 410 QMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPT 488 (570)
T ss_dssp SCTTSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTT
T ss_pred cccchhhhhcCCCC-CEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChh
Confidence 7766 467788888 99999999999999999999999999999999998 68999999999999999999999998899
Q ss_pred hccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcC-C--CCcceeecCCCCcCCC
Q 001908 534 SLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVF-S--NKTRVQLTGNGKLCGG 602 (997)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-~--~~~~~~~~~N~~~C~~ 602 (997)
.|..+++|+.|+|++|++++.+|..+..+++|+.|++++|+++|.+|....+ . .-....+.+.+ .|.+
T Consensus 489 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~wl~~~~~~~~~~~-~C~~ 559 (570)
T 2z63_A 489 AFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNKNSQKEQGSA-KCSG 559 (570)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTHHHHHHHHHTGGGEESCC-BBTT
T ss_pred hhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchHHHHHHHHhccccCCCch-hhCC
Confidence 9999999999999999999988889999999999999999999999875432 1 11123455555 7754
No 15
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-50 Score=492.17 Aligned_cols=514 Identities=17% Similarity=0.234 Sum_probs=416.0
Q ss_pred CCHHHHHHHHHHHHhcCCCCCCCCCCCCCCC----CCeeee-eeecCC--CCcEEEEeccCCCCCCcccccccCcccccc
Q 001908 30 TNETDRLALLAIKSQLHDPLGVTNSWNNSIN----LCQWAG-VTCGHR--HQRVTELDLRHQNIGGSLSPYVGNLSFLRY 102 (997)
Q Consensus 30 ~~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~----~c~w~g-v~C~~~--~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~ 102 (997)
....+...-.++++-...-.+ .+|....+ .|.|.. ..|..= ...|+- + . -.+++.
T Consensus 24 ~~~~~~~d~~aL~~~~~~~~~--~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C-~-----------~----~~~V~~ 85 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDALNG--KNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL-N-----------S----NGRVTG 85 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHTTG--GGCCCCC------CCCCCSSCGGGTTCCTTEEE-C-----------T----TCCEEE
T ss_pred hhhhHHHHHHHHHHHHHHcCC--CCcccCCcCCccCCCCCCCCCcccccCCCCeEE-c-----------C----CCCEEE
Confidence 346666666777754433222 37874432 247963 222210 123431 1 0 046789
Q ss_pred ccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeeccccc
Q 001908 103 INLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNH 182 (997)
Q Consensus 103 L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~ 182 (997)
|+|++|++.|.+|++|++|++|++|||++|.+.. -+.-++... ....+|... +.+|+ +++++|.
T Consensus 86 L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~-~~~~~~~~~-----------~~~~~~~~~---~~~l~-l~l~~~~ 149 (636)
T 4eco_A 86 LSLEGFGASGRVPDAIGQLTELEVLALGSHGEKV-NERLFGPKG-----------ISANMSDEQ---KQKMR-MHYQKTF 149 (636)
T ss_dssp EECTTSCCEEEECGGGGGCTTCCEEESCCGGGGG-TCCSBSTTS-----------BCTTCCHHH---HHHHH-THHHHHH
T ss_pred EEecCcccCCcCChHHhcCccceEEECcCCcccc-CCccccccc-----------cccCchHHH---HHHHH-hhHHHhh
Confidence 9999999999999999999999999999998741 111111110 011445444 45666 9999999
Q ss_pred ccCcCcCccCcc--hhhhhhccCccccccCCCcccCCCccceeecc--CCCCCCCCCccccccCCCccEEEecCCcCcCC
Q 001908 183 LTGMLPASIGNL--SIIYLHVGENQFSGTVPPSLYNMSSLENILLD--VNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGS 258 (997)
Q Consensus 183 l~g~~p~~~~~l--~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~--~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~ 258 (997)
+.+.+|..++.+ .+..+++....+.. .....++.+++. .|+++| ||..++ ++++|++|+|++|+++|.
T Consensus 150 l~~~~~~~~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~-~l~~L~~L~Ls~n~l~~~ 221 (636)
T 4eco_A 150 VDYDPREDFSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVM-RLTKLRQFYMGNSPFVAE 221 (636)
T ss_dssp TCCCGGGGSCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGG-GCTTCCEEEEESCCCCGG
T ss_pred hccCchhhHHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHh-cccCCCEEECcCCccccc
Confidence 999999988865 23455655544431 223345555554 689998 999876 899999999999999996
Q ss_pred -----------------CCCCCC--CCCCCcEEeccCccCCCcccccccccCccCeeEccCcc-CCCCCCCCcchhhhhc
Q 001908 259 -----------------IPESFS--NASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINN-LGSGGANDLDFVTILT 318 (997)
Q Consensus 259 -----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~~~~~~~~~~l~ 318 (997)
+|..++ ++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ ..+|..+.
T Consensus 222 ~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~-----~~lp~~~~ 296 (636)
T 4eco_A 222 NICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISG-----EQLKDDWQ 296 (636)
T ss_dssp GBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCH-----HHHHHHHH
T ss_pred cccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCcc-----ccchHHHH
Confidence 999999 99999999999999999999999999999999999998 763 02455566
Q ss_pred cC------CCCcEEEeecCccCCCCcc--cccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCc
Q 001908 319 NC------SKLKVLAFEENRLGGVLPH--SIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREI 390 (997)
Q Consensus 319 ~l------~~L~~L~L~~N~l~~~~p~--~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 390 (997)
.+ ++|++|++++|+++ .+|. .+.++ ++|+.|++++|+++|.+| .|+++++|++|+|++|+++ .+|..+
T Consensus 297 ~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l-~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l 372 (636)
T 4eco_A 297 ALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM-KKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANF 372 (636)
T ss_dssp HHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC-TTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTS
T ss_pred hhhccccCCCCCEEECCCCcCC-ccCchhhhccC-CCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhh
Confidence 65 99999999999999 8888 88887 789999999999999999 9999999999999999999 889999
Q ss_pred ccccc-cceeccccccccccchhhhcCCC--CCCeEEeecCcCCCCCCCCCC-------CCCCCcEEecCCCcccCCccc
Q 001908 391 GQLRN-LQAIGLSSNFLQGNIPSSLGNLT--LMTDLFLSSNHLQGNIPPSLG-------NCKNLVSLNLSDNKLIGAVPQ 460 (997)
Q Consensus 391 ~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~ 460 (997)
.++++ |++|+|++|+++ .+|..+..++ +|+.|+|++|++++.+|..|. .+++|++|+|++|+++ .+|.
T Consensus 373 ~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~ 450 (636)
T 4eco_A 373 CGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPK 450 (636)
T ss_dssp EEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCT
T ss_pred hhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCH
Confidence 99999 999999999999 7899888765 899999999999999999998 8889999999999999 6777
Q ss_pred cccc-ccccccccccCCCcccCCCcccc-ccc-------cccceecccccccccccccccc--CCcCccEEEccCccccc
Q 001908 461 QILT-ITTLSRFLDLGNNHLNGSLPLEV-GNL-------KNLVALYISGNQFSGEIPVTLT--GCTGLEIFHMQGNSFRG 529 (997)
Q Consensus 461 ~~~~-l~~ll~~L~Ls~N~l~~~~p~~~-~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~ 529 (997)
.++. ++++ +.|+|++|+++ .+|..+ ..+ ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++
T Consensus 451 ~~~~~l~~L-~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 451 ELFSTGSPL-SSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp HHHHTTCCC-SEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS
T ss_pred HHHccCCCC-CEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC
Confidence 6654 7888 99999999999 566543 333 39999999999999 7888887 99999999999999997
Q ss_pred cCChhccccCcCCeeeC------ccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 530 SIPLSLRSLKSIKELDL------SCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 530 ~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
+|..+..+++|+.|+| ++|++.+.+|..+..+++|++|+|++|++ +.+|.. .++++..+++.+|++.|-.
T Consensus 528 -ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 528 -FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNISID 603 (636)
T ss_dssp -CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCEEE
T ss_pred -cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcccc
Confidence 8999999999999999 56889999999999999999999999999 677765 3488999999999999854
No 16
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.9e-50 Score=482.68 Aligned_cols=504 Identities=19% Similarity=0.159 Sum_probs=424.9
Q ss_pred eccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccc
Q 001908 80 DLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLV 159 (997)
Q Consensus 80 ~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~ 159 (997)
+-++.+++ .+|..+. +++++|||++|++++..|..|+++++|++|||++|++++..|..++++++|++|++++|++.
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 89 (570)
T 2z63_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (570)
T ss_dssp ECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC
Confidence 33444553 4666543 57999999999999888889999999999999999999777788999999999999999988
Q ss_pred ccccccccccccccceeecccccccCcCcCccCcch-hhhhhccCccccc-cCCCcccCCCccceeeccCCCCCCCCCcc
Q 001908 160 GEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSG-TVPPSLYNMSSLENILLDVNGFTGNLPLD 237 (997)
Q Consensus 160 g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g-~ip~~l~~l~~L~~L~L~~N~l~g~lp~~ 237 (997)
+..|.. +..+++|++|++++|++++..+..+++++ +++|++++|++++ .+|..++++++|++|++++|++++..|.
T Consensus 90 ~~~~~~-~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~- 167 (570)
T 2z63_A 90 SLALGA-FSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT- 167 (570)
T ss_dssp EECTTT-TTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG-
T ss_pred ccCHhh-hcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH-
Confidence 544444 45689999999999999977666788884 6689999999987 5799999999999999999999854444
Q ss_pred ccccCCCc----cEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCC-cccccccccCccCeeEccCccCCC------C
Q 001908 238 IGVTLPNL----QVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTG-KVSIIFGRLKNLWSLDLGINNLGS------G 306 (997)
Q Consensus 238 ~~~~l~~L----~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~------~ 306 (997)
.+..+++| +.|++++|.+++..|..|..+ +|+.|+|++|.... ..+..+..+++++.+.+..+.+.. +
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~ 246 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKF 246 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEEC
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhc
Confidence 34467777 889999999998888888776 79999999986553 346677788888877776544332 2
Q ss_pred CCCCcchhhhhccCCCCcEEEeecC-ccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC
Q 001908 307 GANDLDFVTILTNCSKLKVLAFEEN-RLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN 385 (997)
Q Consensus 307 ~~~~~~~~~~l~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 385 (997)
....+ ..+..+ .++.+++++| .+.+..|..+..+ ++|+.|++++|.++ .+|..+..+ +|+.|++++|+++ .
T Consensus 247 ~~~~~---~~l~~l-~l~~l~l~~~~~~~~~~~~~~~~l-~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~ 318 (570)
T 2z63_A 247 DKSAL---EGLCNL-TIEEFRLAYLDYYLDDIIDLFNCL-TNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-Q 318 (570)
T ss_dssp CTTTT---GGGGGS-EEEEEEEEETTEEESCSTTTTGGG-TTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-S
T ss_pred chhhh---cccccc-chhhhhhhcchhhhhhchhhhcCc-CcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-c
Confidence 22111 122222 3678888888 8888889888887 78999999999998 688899999 9999999999999 5
Q ss_pred CCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCC--CCCCCCCCCCcEEecCCCcccCCcccccc
Q 001908 386 IPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNI--PPSLGNCKNLVSLNLSDNKLIGAVPQQIL 463 (997)
Q Consensus 386 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 463 (997)
+|. ..+++|++|++++|.+.+..+. ..+++|+.|++++|++++.. |..+.++++|++|++++|.+.+ +|..+.
T Consensus 319 l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~ 393 (570)
T 2z63_A 319 FPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVIT-MSSNFL 393 (570)
T ss_dssp CCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEE-EEEEEE
T ss_pred cCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccc-cccccc
Confidence 665 5789999999999999977665 78999999999999998654 6788899999999999999985 455588
Q ss_pred cccccccccccCCCcccCCCc-cccccccccceeccccccccccccccccCCcCccEEEccCcccc-ccCChhccccCcC
Q 001908 464 TITTLSRFLDLGNNHLNGSLP-LEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFR-GSIPLSLRSLKSI 541 (997)
Q Consensus 464 ~l~~ll~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L 541 (997)
.++++ +.|++++|++++..| ..+.++++|++|++++|++++..|..|.++++|+.|++++|+++ +.+|..+..+++|
T Consensus 394 ~l~~L-~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L 472 (570)
T 2z63_A 394 GLEQL-EHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL 472 (570)
T ss_dssp TCTTC-CEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC
T ss_pred ccCCC-CEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC
Confidence 89998 999999999998776 57899999999999999999999999999999999999999998 6799999999999
Q ss_pred CeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCCCC
Q 001908 542 KELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 542 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~~ 603 (997)
+.|+|++|++++..|..+..+++|++|++++|++++.+|.. ..+++++.+++.+||+.|.++
T Consensus 473 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 535 (570)
T 2z63_A 473 TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 535 (570)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCc
Confidence 99999999999999999999999999999999999988764 677889999999999999763
No 17
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.6e-50 Score=481.13 Aligned_cols=490 Identities=17% Similarity=0.181 Sum_probs=387.3
Q ss_pred eecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCc
Q 001908 68 TCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSN 147 (997)
Q Consensus 68 ~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~ 147 (997)
.|.. ..+ .|.++++++ .+|+.+. ++|++|||++|++++..|.+|+++++|++|+|++|++++..|..++++++
T Consensus 3 ~C~~--~~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDA--SGV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECT--TSE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCC--Cce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 5753 234 789999986 6777665 78999999999999888899999999999999999999877788888887
Q ss_pred ccchhcccccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccC
Q 001908 148 LLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDV 227 (997)
Q Consensus 148 L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~ 227 (997)
|++|++++|++.+..|..++ .+++|++|+|++|.+++. .+|..++++++|++|+|++
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~----------------------~~~~~~~~l~~L~~L~L~~ 132 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFG-PLSSLKYLNLMGNPYQTL----------------------GVTSLFPNLTNLQTLRIGN 132 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHT-TCTTCCEEECTTCCCSSS----------------------CSSCSCTTCTTCCEEEEEE
T ss_pred CCEEECCCCccCccCHHHhc-cCCCCcEEECCCCccccc----------------------chhhhhhccCCccEEECCC
Confidence 77666666665543333332 455555555555555431 3566778888888888888
Q ss_pred CCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCC
Q 001908 228 NGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGG 307 (997)
Q Consensus 228 N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 307 (997)
|++.+.+|...+..+++|++|++++|++++.+|..++.+++|++|+++.|.+.......+..+++|++|++++|+++...
T Consensus 133 n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 212 (549)
T 2z81_A 133 VETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQ 212 (549)
T ss_dssp SSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCC
T ss_pred CccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCcccccc
Confidence 88666787666668888888888888888888888888999999999988887665555677888999999999888753
Q ss_pred CCCcchhhhhccCCCCcEEEeecCccCCCCccccccc---ccccccccccCccccccc------CCCCCCCCCCCEEecc
Q 001908 308 ANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANL---STTMTDIYMGVNQISGTI------PSGIGNLVNLNLLGIE 378 (997)
Q Consensus 308 ~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~~L~~L~l~~N~l~~~~------p~~~~~l~~L~~L~L~ 378 (997)
.... .....+++|+.|++++|.+++..+..+... ...++.+++++|.+.+.. ...+..+.+|+.|++.
T Consensus 213 ~~~~---~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~ 289 (549)
T 2z81_A 213 FSPL---PVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIR 289 (549)
T ss_dssp CCCC---SSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEE
T ss_pred cccc---chhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccccc
Confidence 2211 123457788899999998887655444321 256788888888887532 2346778899999999
Q ss_pred CCCCCCC-----CCCCcccccccceeccccccccccchhhh-cCCCCCCeEEeecCcCCCCCC---CCCCCCCCCcEEec
Q 001908 379 FNQLTGN-----IPREIGQLRNLQAIGLSSNFLQGNIPSSL-GNLTLMTDLFLSSNHLQGNIP---PSLGNCKNLVSLNL 449 (997)
Q Consensus 379 ~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 449 (997)
++.+... ++..+..+.+|++|++++|+++ .+|..+ .++++|++|+|++|++++.+| ..++.+++|++|+|
T Consensus 290 ~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~L 368 (549)
T 2z81_A 290 RLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVL 368 (549)
T ss_dssp SCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEEC
T ss_pred ccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEc
Confidence 9987642 1222344578999999999998 677666 689999999999999998664 45889999999999
Q ss_pred CCCcccCCcc--cccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccc
Q 001908 450 SDNKLIGAVP--QQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSF 527 (997)
Q Consensus 450 ~~N~l~~~~p--~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 527 (997)
++|++++..+ ..+..++++ ++|++++|+++ .+|..+..+++|++|++++|+++ .+|..+. ++|+.|+|++|++
T Consensus 369 s~N~l~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l 443 (549)
T 2z81_A 369 SQNHLRSMQKTGEILLTLKNL-TSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNL 443 (549)
T ss_dssp TTSCCCCHHHHHHHGGGCTTC-CEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCC
T ss_pred cCCcccccccchhhhhcCCCC-CEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCCh
Confidence 9999985432 457888888 99999999999 78989999999999999999998 5555443 6899999999999
Q ss_pred cccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCCC
Q 001908 528 RGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 528 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~ 602 (997)
++.+ ..+++|++|||++|+|+ .+|. ...+++|++|+|++|++++.+|.. ..+.+++.+++.+|||.|.+
T Consensus 444 ~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 444 DSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp SCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred hhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 9753 57899999999999998 6776 568999999999999999988863 67889999999999999975
No 18
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-50 Score=499.13 Aligned_cols=462 Identities=17% Similarity=0.204 Sum_probs=300.8
Q ss_pred cccccccccccccCCCCCccCCCCCCCeEEEc-cCCCccccCCccccCC----Ccccchhcccc---ccccccccccccc
Q 001908 98 SFLRYINLATNNFHGEIPKEIGFLFRLETLML-ANNSFSGKIPTNLSSC----SNLLSFVAYRN---NLVGEIPEDIGYS 169 (997)
Q Consensus 98 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L-s~N~l~g~iP~~l~~l----~~L~~l~l~~n---~~~g~ip~~~~~~ 169 (997)
.+++.|+|++|++.|.+|++|++|++|++||| ++|.++|..|-..... +.++...+... .+....|.. .
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~---~ 399 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRL---N 399 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGG---G
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcch---h
Confidence 57899999999999999999999999999999 9999999866442222 11100000000 000000000 0
Q ss_pred ccccceeecccccccCcCcCc-cCcchhhhh--hccCccccccCCCcccCCCccceeeccCCCCCCC-------------
Q 001908 170 WLKLEHISLARNHLTGMLPAS-IGNLSIIYL--HVGENQFSGTVPPSLYNMSSLENILLDVNGFTGN------------- 233 (997)
Q Consensus 170 l~~L~~L~L~~N~l~g~~p~~-~~~l~~~~L--~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~------------- 233 (997)
+..+....+..+. ...+.. ...+.+..+ ....|+++| ||+.|+++++|++|+|++|+|+|.
T Consensus 400 ~s~l~~~~l~~~~--~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~ 476 (876)
T 4ecn_A 400 LSDLLQDAINRNP--EMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDY 476 (876)
T ss_dssp SCHHHHHHHHTCT--TSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHH
T ss_pred hhHHHHHHhhhCc--cccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccccccc
Confidence 0000000000010 011111 111223333 344599998 899999999999999999999972
Q ss_pred ----CCccc-cccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCcc-CCC-cccccccccCccCeeEccCccCCCC
Q 001908 234 ----LPLDI-GVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINY-FTG-KVSIIFGRLKNLWSLDLGINNLGSG 306 (997)
Q Consensus 234 ----lp~~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~ 306 (997)
+|..+ |.++++|++|+|++|++.+.+|..|+++++|++|+|++|+ +++ .+|..|+.++
T Consensus 477 ~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~--------------- 541 (876)
T 4ecn_A 477 AKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLA--------------- 541 (876)
T ss_dssp HHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHH---------------
T ss_pred ccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhh---------------
Confidence 55554 3355566666666666666666666666666666666665 555 4555444443
Q ss_pred CCCCcchhhhhccCCCCcEEEeecCccCCCCcc--cccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCC
Q 001908 307 GANDLDFVTILTNCSKLKVLAFEENRLGGVLPH--SIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTG 384 (997)
Q Consensus 307 ~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 384 (997)
..+..+++|++|+|++|+++ .+|. .+.++ ++|+.|++++|+++ .+| .|+++++|+.|+|++|+++
T Consensus 542 --------~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L-~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~- 608 (876)
T 4ecn_A 542 --------DDEDTGPKIQIFYMGYNNLE-EFPASASLQKM-VKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE- 608 (876)
T ss_dssp --------HCTTTTTTCCEEECCSSCCC-BCCCHHHHTTC-TTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-
T ss_pred --------hcccccCCccEEEeeCCcCC-ccCChhhhhcC-CCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-
Confidence 01122335555555555555 4555 55554 45555666666665 555 6666677777777777776
Q ss_pred CCCCCcccccc-cceeccccccccccchhhhcCCCC--CCeEEeecCcCCCCCCCCC---C--CCCCCcEEecCCCcccC
Q 001908 385 NIPREIGQLRN-LQAIGLSSNFLQGNIPSSLGNLTL--MTDLFLSSNHLQGNIPPSL---G--NCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 385 ~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~ 456 (997)
.+|..+.++++ |++|+|++|+|+ .+|..+..++. |+.|+|++|++++.+|... . .+++|+.|+|++|+++
T Consensus 609 ~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~- 686 (876)
T 4ecn_A 609 EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ- 686 (876)
T ss_dssp CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-
T ss_pred cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-
Confidence 66666777766 777777777776 56666665543 7777777777766555322 2 2346777777777776
Q ss_pred Ccccccc-cccccccccccCCCcccCCCccccc--------cccccceecccccccccccccccc--CCcCccEEEccCc
Q 001908 457 AVPQQIL-TITTLSRFLDLGNNHLNGSLPLEVG--------NLKNLVALYISGNQFSGEIPVTLT--GCTGLEIFHMQGN 525 (997)
Q Consensus 457 ~~p~~~~-~l~~ll~~L~Ls~N~l~~~~p~~~~--------~l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N 525 (997)
.+|..++ .++++ +.|+|++|+++ .+|..+. ++++|+.|+|++|+++ .+|..+. .+++|+.|+|++|
T Consensus 687 ~lp~~~~~~l~~L-~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N 763 (876)
T 4ecn_A 687 KFPTELFATGSPI-STIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYN 763 (876)
T ss_dssp SCCHHHHHTTCCC-SEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSS
T ss_pred ccCHHHHccCCCC-CEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCC
Confidence 5665554 45565 67777777777 4454433 2348888888888888 7788776 8888888888888
Q ss_pred cccccCChhccccCcCCeeeCcc------ccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCc
Q 001908 526 SFRGSIPLSLRSLKSIKELDLSC------NNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKL 599 (997)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~ 599 (997)
+|++ +|..+..+++|+.|+|++ |++.+.+|..+..+++|+.|+|++|++ +.+|.. ..+++..+++.+|++.
T Consensus 764 ~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 764 CFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPNI 840 (876)
T ss_dssp CCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTTC
T ss_pred CCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCCC
Confidence 8886 788888888888888866 889999999999999999999999999 788875 3478999999999986
Q ss_pred CC
Q 001908 600 CG 601 (997)
Q Consensus 600 C~ 601 (997)
.-
T Consensus 841 ~i 842 (876)
T 4ecn_A 841 SI 842 (876)
T ss_dssp EE
T ss_pred cc
Confidence 53
No 19
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.7e-51 Score=442.07 Aligned_cols=265 Identities=26% Similarity=0.427 Sum_probs=211.4
Q ss_pred hcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|.+.++||+|+||+||+|++. .++..||||+++.......+.|.+|+++|++++|||||+++++|.+ +
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 87 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVE-----G 87 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----C
Confidence 57888999999999999999975 3578899999987777777899999999999999999999999753 4
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCC-------CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNG-------QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 826 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~ 826 (997)
+..++|||||++|+|.+++++... ......++|.++++|+.||++||+|||++ +|+||||||+|||++++
T Consensus 88 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~ 164 (299)
T 4asz_A 88 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGEN 164 (299)
T ss_dssp SSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGG
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCC
Confidence 579999999999999999987531 11223589999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT- 905 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt- 905 (997)
+++||+|||+|+...... .........||+.|||||++. +..|+.++|||||||++|||+|
T Consensus 165 ~~~Ki~DFGla~~~~~~~------~~~~~~~~~gt~~ymAPE~~~------------~~~~~~k~DVwS~Gvvl~Ellt~ 226 (299)
T 4asz_A 165 LLVKIGDFGMSRDVYSTD------YYRVGGHTMLPIRWMPPESIM------------YRKFTTESDVWSLGVVLWEIFTY 226 (299)
T ss_dssp GCEEECCCSCHHHHTGGG------CEEETTTEEECGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTT
T ss_pred CcEEECCcccceecCCCC------ceeecCceecChhhcCHHHHc------------CCCCCchhhHHHHHHHHHHHHcC
Confidence 999999999998763211 112223456899999997765 4679999999999999999999
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
|+.||.... ..+......... ..+.+..+++++.+++.+||+.||++||||+||.+.|
T Consensus 227 G~~Pf~~~~-----~~~~~~~i~~~~-----------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L 284 (299)
T 4asz_A 227 GKQPWYQLS-----NNEVIECITQGR-----------------VLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLL 284 (299)
T ss_dssp TCCTTTTSC-----HHHHHHHHHHTC-----------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred CCCCCCCCC-----HHHHHHHHHcCC-----------------CCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHH
Confidence 899997432 122211111000 0111234567889999999999999999999999999
Q ss_pred HHHHHH
Q 001908 986 CAARQT 991 (997)
Q Consensus 986 ~~~~~~ 991 (997)
+++.++
T Consensus 285 ~~~~~~ 290 (299)
T 4asz_A 285 QNLAKA 290 (299)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 988764
No 20
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=4.7e-50 Score=436.37 Aligned_cols=266 Identities=29% Similarity=0.431 Sum_probs=205.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+++++.++||+|+||+||+|+++. .||||+++.. .....+.|.+|++++++++|||||+++++|.. +.
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~------~~ 105 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK------DN 105 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS------SS
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC------Ce
Confidence 3578889999999999999998752 5999999743 34556789999999999999999999998742 35
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++|||||++|+|.++++.... .+++.++++|+.||++||+|||++ +|+||||||+|||+++++++||+|||
T Consensus 106 ~~iVmEy~~gGsL~~~l~~~~~-----~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred EEEEEEcCCCCCHHHHHhhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeecc
Confidence 7999999999999999986542 489999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+...... ........+||+.|||||++... ..+.|+.++|||||||++|||+||+.||.....
T Consensus 178 la~~~~~~~------~~~~~~~~~GT~~ymAPE~l~~~---------~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~ 242 (307)
T 3omv_A 178 LATVKSRWS------GSQQVEQPTGSVLWMAPEVIRMQ---------DNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242 (307)
T ss_dssp SCBC------------------CCCCTTSCCHHHHHCC---------SSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred CceecccCC------cceeecccccCCCccCHHHhhcc---------CCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCCh
Confidence 998652211 11223446899999999887531 135689999999999999999999999974321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
......... . ....|... ..+.+++.++.+++.+||+.||++||||.||++.|+.+..++
T Consensus 243 ----~~~~~~~~~-~---~~~~p~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 243 ----RDQIIFMVG-R---GYASPDLS---------KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp ----HHHHHHHHH-T---TCCCCCST---------TSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred ----HHHHHHHHh-c---CCCCCCcc---------cccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 111111110 0 01111111 112245678899999999999999999999999999887654
No 21
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.7e-50 Score=443.66 Aligned_cols=265 Identities=26% Similarity=0.421 Sum_probs=207.0
Q ss_pred hcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|.+.++||+|+||+||+|+++ .+++.||||+++.......+.|.+|+++|++++|||||+++++|.. .
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~-----~ 115 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTE-----G 115 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----S
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----C
Confidence 46778899999999999999975 3578999999987777777899999999999999999999999753 4
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCC---------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQP---------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~---------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
+..++|||||++|+|.+++++..... ...+++|.++++|+.||++||+|||++ +|+||||||+|||++
T Consensus 116 ~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 116 RPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp SSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred CEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 57999999999999999998754211 123589999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
+++++||+|||+|+...... .........||+.|||||++. +..|+.++|||||||++|||+
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~------~~~~~~~~~gt~~ymAPE~~~------------~~~~~~~sDvwS~Gvvl~Ell 254 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTD------YYRVGGRTMLPIRWMPPESIL------------YRKFTTESDVWSFGVVLWEIF 254 (329)
T ss_dssp TTTEEEECCCC----------------------CCCCGGGCCHHHHT------------TCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEcccccceeccCCC------cceecCcccccccccChhhhc------------CCCCCccccccchHHHHHHHH
Confidence 99999999999998753221 112223457999999996654 578999999999999999999
Q ss_pred h-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 T-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
| |+.||.... ..+...... ... +.+.+..+++++.+++.+||+.||++||||+||++
T Consensus 255 t~G~~Pf~~~~-----~~~~~~~i~-----~g~------------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~ 312 (329)
T 4aoj_A 255 TYGKQPWYQLS-----NTEAIDCIT-----QGR------------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312 (329)
T ss_dssp TTSCCTTCSSC-----HHHHHHHHH-----HTC------------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred cCCCCCCCCCC-----HHHHHHHHH-----cCC------------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence 9 899997432 112111110 000 11122345678899999999999999999999999
Q ss_pred HHHHHHHH
Q 001908 984 KLCAARQT 991 (997)
Q Consensus 984 ~L~~~~~~ 991 (997)
.|+++.+.
T Consensus 313 ~L~~l~~~ 320 (329)
T 4aoj_A 313 RLQALAQA 320 (329)
T ss_dssp HHHHHHHS
T ss_pred HHHHHhhC
Confidence 99998875
No 22
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-49 Score=475.21 Aligned_cols=463 Identities=18% Similarity=0.190 Sum_probs=342.5
Q ss_pred EEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccc
Q 001908 77 TELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRN 156 (997)
Q Consensus 77 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n 156 (997)
+.||+++|+++ .+|..+. ++|++|||++|++++..|..|+++++|++|+|++|++++..|..++++++|++|++++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999997 5887776 89999999999999877788999999999999999999877888998888888888877
Q ss_pred cccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCc
Q 001908 157 NLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPL 236 (997)
Q Consensus 157 ~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~ 236 (997)
++. .+|.. .+++|++|+|++|++++. .+|..++++++|++|+|++|++++
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~----------------------~~p~~~~~l~~L~~L~L~~n~l~~---- 129 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDAL----------------------PICKEFGNMSQLKFLGLSTTHLEK---- 129 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSC----------------------CCCGGGGGCTTCCEEEEEESSCCG----
T ss_pred cee-ecCcc---ccCCccEEeccCCccccc----------------------cchhhhccCCcceEEEecCcccch----
Confidence 776 57765 466777777777776641 345666666777777777777664
Q ss_pred cccccCCCc--cEEEecCCcC--cCCCCCCCCCCC-CCcEEeccCccCCCccc-ccccccCccCeeEccCccCCCCCCCC
Q 001908 237 DIGVTLPNL--QVFAIGDNYF--SGSIPESFSNAS-NIEIIDLPINYFTGKVS-IIFGRLKNLWSLDLGINNLGSGGAND 310 (997)
Q Consensus 237 ~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~ 310 (997)
..+..+++| +.|++++|.+ ++..|..+..+. +...+++++|++.+.++ ..+..+++|+.|++++|.-.......
T Consensus 130 ~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~ 209 (520)
T 2z7x_B 130 SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYF 209 (520)
T ss_dssp GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHH
T ss_pred hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeecccccccccccccee
Confidence 123356666 7777777777 667777776665 34456777777766543 35667777777777777511000000
Q ss_pred cchhhhhccCCCCcEEEeecCccCCCCccccccc--ccccccccccCcccccccCCCC-----CCCCCCCEEeccCCCCC
Q 001908 311 LDFVTILTNCSKLKVLAFEENRLGGVLPHSIANL--STTMTDIYMGVNQISGTIPSGI-----GNLVNLNLLGIEFNQLT 383 (997)
Q Consensus 311 ~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~ 383 (997)
....+.+..+++|+.|++++|.+++..+..+... .++|+.|++++|+++|.+|..+ +++++|+.+++++|.+
T Consensus 210 ~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~- 288 (520)
T 2z7x_B 210 LSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF- 288 (520)
T ss_dssp HHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-
T ss_pred ecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-
Confidence 0123356777888888888887765433322210 1367777777787777777777 7888888888888888
Q ss_pred CCCC-CCcccc---cccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC--C
Q 001908 384 GNIP-REIGQL---RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG--A 457 (997)
Q Consensus 384 ~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~ 457 (997)
.+| ..+..+ .+|+.|++++|.+.+.. .+..+++|++|+|++|++++.+|..+.++++|++|+|++|++++ .
T Consensus 289 -~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~ 365 (520)
T 2z7x_B 289 -GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSK 365 (520)
T ss_dssp -CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHH
T ss_pred -ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCcccc
Confidence 455 455554 56888888888887432 12678888888888888888888888888888888888888876 5
Q ss_pred cccccccccccccccccCCCcccCCCccc-cccccccceeccccccccccccccccCCcCccEEEccCccccccCChhcc
Q 001908 458 VPQQILTITTLSRFLDLGNNHLNGSLPLE-VGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLR 536 (997)
Q Consensus 458 ~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 536 (997)
+|..+..++++ ++|++++|++++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+.
T Consensus 366 ~~~~~~~l~~L-~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~ 441 (520)
T 2z7x_B 366 IAEMTTQMKSL-QQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV 441 (520)
T ss_dssp HHHHHTTCTTC-CEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG
T ss_pred chHHHhhCCCC-CEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh
Confidence 66777888887 88888888888756654 77888888888888888877777665 68888888888888 7787777
Q ss_pred ccCcCCeeeCccccccccCchh-ccCCCCCCEEeCCCCcCcccCCC
Q 001908 537 SLKSIKELDLSCNNLSGQIPEF-LENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
.+++|+.|+|++|+|++ +|.. +..+++|++|++++|++++.++.
T Consensus 442 ~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 486 (520)
T 2z7x_B 442 KLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCPR 486 (520)
T ss_dssp GCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCCc
Confidence 88888888888888884 5554 88888888888888888877653
No 23
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.2e-50 Score=436.67 Aligned_cols=261 Identities=24% Similarity=0.357 Sum_probs=206.8
Q ss_pred hcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.++++.++||+|+||+||+|++. .+++.||||+++... ....+.|.+|++++++++|||||+++|+|..
T Consensus 26 ~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~----- 100 (308)
T 4gt4_A 26 SAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK----- 100 (308)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred HHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE-----
Confidence 35677889999999999999974 356899999997433 3345789999999999999999999999754
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
++..++|||||++|+|.+++....... ....++|.++++|+.|||+||+|||++ +|+||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceE
Confidence 457899999999999999997653211 123589999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+++++++||+|||+|+...... .........||+.|||||++. ++.|+.++|||||||++||
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~------------~~~~s~ksDVwSfGvvl~E 239 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAAD------YYKLLGNSLLPIRWMAPEAIM------------YGKFSIDSDIWSYGVVLWE 239 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGG------CBCSSSSSCBCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHH
T ss_pred ECCCCCEEECCcccceeccCCC------ceeEecccccCCcccCHHHHh------------CCCCCccchhhhHHHHHHH
Confidence 9999999999999998763221 112233457999999997665 4679999999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|+| |+.||.... ..+....... +...+.+.+|+.++.++|.+||+.||++||||+||
T Consensus 240 l~t~g~~Pf~~~~-----~~~~~~~i~~-----------------~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei 297 (308)
T 4gt4_A 240 VFSYGLQPYCGYS-----NQDVVEMIRN-----------------RQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDI 297 (308)
T ss_dssp HHTTTCCTTTTCC-----HHHHHHHHHT-----------------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhCCCCCCCCCC-----HHHHHHHHHc-----------------CCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHH
Confidence 999 899987432 1222111110 11112234567789999999999999999999999
Q ss_pred HHHHHH
Q 001908 982 LAKLCA 987 (997)
Q Consensus 982 l~~L~~ 987 (997)
++.|++
T Consensus 298 ~~~L~a 303 (308)
T 4gt4_A 298 HSRLRA 303 (308)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 999975
No 24
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.1e-48 Score=422.43 Aligned_cols=252 Identities=27% Similarity=0.384 Sum_probs=198.9
Q ss_pred CccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 681 FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 681 ~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
|++.++||+|+||+||+|+++.++..||+|++... .....+.+.+|++++++++|||||++++++... ...+...|+
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~-~~~~~~~~l 106 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE-ETTEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec-cCCCcEEEE
Confidence 36677899999999999999999999999999633 344567899999999999999999999987542 233567899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEcccccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLA 837 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFg~a 837 (997)
|||||++|+|.+++++.. .+++..++.++.||+.||+|||++. ++|+||||||+|||++. +|.+||+|||+|
T Consensus 107 vmEy~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla 179 (290)
T 3fpq_A 107 VTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179 (290)
T ss_dssp EEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGG
T ss_pred EEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCC
Confidence 999999999999998764 4889999999999999999999981 13999999999999984 899999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+.... ......+||+.|||||++. +.|+.++|||||||++|||+||+.||....
T Consensus 180 ~~~~~----------~~~~~~~GTp~YmAPE~~~-------------~~y~~~~DiwSlGvilyelltg~~Pf~~~~--- 233 (290)
T 3fpq_A 180 TLKRA----------SFAKAVIGTPEFMAPEMYE-------------EKYDESVDVYAFGMCMLEMATSEYPYSECQ--- 233 (290)
T ss_dssp GGCCT----------TSBEESCSSCCCCCGGGGG-------------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCS---
T ss_pred EeCCC----------CccCCcccCccccCHHHcC-------------CCCCcHHHHHHHHHHHHHHHHCCCCCCCCC---
Confidence 75311 1233468999999998663 358999999999999999999999996321
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... ....|.. .+..+++++.+++.+||..||++|||++|+++
T Consensus 234 -~~~~~~~~i~-----~~~~~~~-----------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 234 -NAAQIYRRVT-----SGVKPAS-----------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp -SHHHHHHHHT-----TTCCCGG-----------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -cHHHHHHHHH-----cCCCCCC-----------CCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 2222211111 1111110 01112346789999999999999999999875
No 25
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.3e-48 Score=465.79 Aligned_cols=453 Identities=16% Similarity=0.160 Sum_probs=371.1
Q ss_pred ccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeeccc
Q 001908 101 RYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLAR 180 (997)
Q Consensus 101 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~ 180 (997)
++||+++|+++ .+|..+. ++|++|+|++|.+++..|..++++++|++|++++|++.+..|..+. .+++|++|+|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-~l~~L~~L~L-- 76 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFK-FNQELEYLDL-- 76 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGT-TCTTCCEEEC--
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhh-cccCCCEEec--
Confidence 57899999999 7888777 8999999999999876667787777776555555555543333332 3444555554
Q ss_pred ccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCC-CCCccccccCCCccEEEecCCcCcCCC
Q 001908 181 NHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTG-NLPLDIGVTLPNLQVFAIGDNYFSGSI 259 (997)
Q Consensus 181 N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g-~lp~~~~~~l~~L~~L~L~~N~l~~~~ 259 (997)
++|+++ .+|.. .+++|++|+|++|++++ .+|..++ .+++|++|++++|++++
T Consensus 77 ---------------------s~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~-~l~~L~~L~L~~n~l~~-- 129 (520)
T 2z7x_B 77 ---------------------SHNKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFG-NMSQLKFLGLSTTHLEK-- 129 (520)
T ss_dssp ---------------------CSSCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGG-GCTTCCEEEEEESSCCG--
T ss_pred ---------------------CCCcee-ecCcc--ccCCccEEeccCCccccccchhhhc-cCCcceEEEecCcccch--
Confidence 445444 46666 78999999999999996 5777765 89999999999999986
Q ss_pred CCCCCCCCCC--cEEeccCccC--CCcccccccccC-ccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCc--
Q 001908 260 PESFSNASNI--EIIDLPINYF--TGKVSIIFGRLK-NLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENR-- 332 (997)
Q Consensus 260 p~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~-- 332 (997)
..+..+++| ++|+|++|++ ++..|..|..+. +...+++++|++..... ...+.++++|+.|++++|.
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~-----~~~~~~l~~L~~L~l~~n~~~ 203 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFIL-----DVSVKTVANLELSNIKCVLED 203 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCC-----CCCCTTCSEEEECCEEECCST
T ss_pred -hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhh-----hhhhhcccceeeccccccccc
Confidence 467778888 9999999999 888888888776 45567888888765322 2346789999999999998
Q ss_pred -----cCCCCcccccccccccccccccCcccccccCCCCC---CCCCCCEEeccCCCCCCCCCCCc-----cccccccee
Q 001908 333 -----LGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIG---NLVNLNLLGIEFNQLTGNIPREI-----GQLRNLQAI 399 (997)
Q Consensus 333 -----l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L 399 (997)
+.+.+| .+..+ +.|+.|++++|.+++..+..+. ..++|++|++++|+++|.+|..+ +++++|+.+
T Consensus 204 ~~~~~~~~~~~-~l~~l-~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l 281 (520)
T 2z7x_B 204 NKCSYFLSILA-KLQTN-PKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIH 281 (520)
T ss_dssp TTTHHHHHHHH-GGGGC-TTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEE
T ss_pred cccceeecchh-hhccc-cchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEec
Confidence 776666 66666 6899999999998865433221 24689999999999999999998 999999999
Q ss_pred ccccccccccch-hhhcCC---CCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccC
Q 001908 400 GLSSNFLQGNIP-SSLGNL---TLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLG 475 (997)
Q Consensus 400 ~Ls~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls 475 (997)
++++|.+ .+| ..+..+ ++|+.|++++|.+.... .+..+++|++|++++|++++.+|..+..++++ +.|+|+
T Consensus 282 ~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~L~ 356 (520)
T 2z7x_B 282 QVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTEL-ETLILQ 356 (520)
T ss_dssp EEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSC-CEEECC
T ss_pred cccccce--ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCC-CEEEcc
Confidence 9999999 455 566555 78999999999987432 23688999999999999999899999999999 999999
Q ss_pred CCcccC--CCccccccccccceecccccccccccccc-ccCCcCccEEEccCccccccCChhccccCcCCeeeCcccccc
Q 001908 476 NNHLNG--SLPLEVGNLKNLVALYISGNQFSGEIPVT-LTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 476 ~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
+|++++ .+|..++.+++|++|++++|++++.+|.. +..+++|+.|++++|++++.+|..+. ++|+.|||++|+|+
T Consensus 357 ~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~ 434 (520)
T 2z7x_B 357 MNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK 434 (520)
T ss_dssp SSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC
T ss_pred CCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc
Confidence 999997 56788999999999999999999867764 88999999999999999988887775 79999999999999
Q ss_pred ccCchhccCCCCCCEEeCCCCcCcccCCC-CCcCCCCcceeecCCCCcCCC
Q 001908 553 GQIPEFLENLSFLEYLNLSYNHFDGEVPT-KGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 553 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~N~~~C~~ 602 (997)
.+|..+..+++|++|+|++|++++.++. ...++.+..+++.+||+.|.|
T Consensus 435 -~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 435 -SIPKQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp -CCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred -ccchhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCcccC
Confidence 7888888999999999999999965444 456788999999999999975
No 26
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=4.1e-48 Score=424.58 Aligned_cols=282 Identities=23% Similarity=0.277 Sum_probs=206.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|...++||+|+||+||+|++ +|+.||||+++..... ...+..|+..+.+++|||||+++++|...+ ......|+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~-~~~~~~~l 78 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQLWL 78 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecC-CCceEEEE
Confidence 5688889999999999999998 6899999999754322 122334566667889999999999986532 22346899
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC-----QPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~-----~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
|||||++|+|.++++... ++|..+.+++.|+++||+|||+++ .++|+||||||+|||++.++++||+|
T Consensus 79 V~Ey~~~gsL~~~l~~~~-------l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~D 151 (303)
T 3hmm_A 79 VSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIAD 151 (303)
T ss_dssp EEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECC
T ss_pred EecCCCCCcHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEe
Confidence 999999999999998754 889999999999999999999762 45899999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+....... .........+||+.|||||++..... .....++.++|||||||++|||+||.+||...
T Consensus 152 FGla~~~~~~~~----~~~~~~~~~~GT~~ymAPE~l~~~~~------~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~ 221 (303)
T 3hmm_A 152 LGLAVRHDSATD----TIDIAPNHRVGTKRYMAPEVLDDSIN------MKHFESFKRADIYAMGLVFWEIARRCSIGGIH 221 (303)
T ss_dssp CTTCEEEETTTT----EESCC-----CCGGGCCHHHHTTCSC------TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBC
T ss_pred CCCCccccCCCC----ceeeecccccccccccCHHHhccccc------ccCCccChhHhhhhHHHHHHHHHHCCCCCCcc
Confidence 999987632211 11122334679999999988863210 11235788999999999999999998877533
Q ss_pred cCCC----------ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGG----------LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~----------~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ....+....... ...+|.+... ....+++..+.+++.+||+.||++||||.||++
T Consensus 222 ~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~rp~~p~~-------~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~ 290 (303)
T 3hmm_A 222 EDYQLPYYDLVPSDPSVEEMRKVVCE----QKLRPNIPNR-------WQSCEALRVMAKIMRECWYANGAARLTALRIKK 290 (303)
T ss_dssp CCCCCTTTTTSCSSCCHHHHHHHHTT----SCCCCCCCGG-------GGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred ccccccchhcccccchHHHHHHHHhc----ccCCCCCCcc-------ccchHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence 2211 112222111111 1112222111 112356778899999999999999999999999
Q ss_pred HHHHHHHHh
Q 001908 984 KLCAARQTL 992 (997)
Q Consensus 984 ~L~~~~~~~ 992 (997)
.|+++.++-
T Consensus 291 ~L~~l~~~~ 299 (303)
T 3hmm_A 291 TLSQLSQQE 299 (303)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHHHc
Confidence 999988754
No 27
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.4e-48 Score=429.86 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=204.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+.|+..++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++. +++..|+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~i 148 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWV 148 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEEE
Confidence 46889999999999999999999999999999997655555677899999999999999999999954 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|||||++|+|.+++.... +++.++..++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+|+
T Consensus 149 vmEy~~gg~L~~~l~~~~-------l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~ 218 (346)
T 4fih_A 149 VMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 218 (346)
T ss_dssp EECCCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCce
Confidence 999999999999998643 88999999999999999999999 99999999999999999999999999998
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.+... .......+||+.|||||++. +..|+.++||||+||++|||++|++||...
T Consensus 219 ~~~~~--------~~~~~~~~GTp~YmAPEvl~------------~~~y~~~~DiWSlGvilyeml~G~~PF~~~----- 273 (346)
T 4fih_A 219 QVSKE--------VPRRKSLVGTPYWMAPELIS------------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----- 273 (346)
T ss_dssp ECCSS--------SCCBCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----
T ss_pred ecCCC--------CCcccccccCcCcCCHHHHC------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----
Confidence 75221 12234568999999997664 567999999999999999999999999742
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+..... .....+... ....+.+++.+++.+||..||++|||+.|+++
T Consensus 274 ~~~~~~~~i-----~~~~~~~~~----------~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 274 PPLKAMKMI-----RDNLPPRLK----------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp CHHHHHHHH-----HHSSCCCCS----------CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHH-----HcCCCCCCC----------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 111111110 01123456789999999999999999999875
No 28
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.5e-48 Score=430.20 Aligned_cols=251 Identities=21% Similarity=0.322 Sum_probs=199.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.++||+|+||+||+|+++.+|+.||||+++.. .....+.+.+|++++++++|||||++++++ .+++..
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~-----~~~~~~ 98 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF-----EENGSL 98 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----EETTEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE-----EECCEE
Confidence 5799999999999999999999999999999999643 344567899999999999999999999995 446689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+|||||+||+|.+++...... .+++.+++.++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+
T Consensus 99 yiVmEy~~gg~L~~~i~~~~~~----~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 99 YIVMDYCEGGDLFKRINAQKGV----LFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEEEECCTTCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEEEeCCCCCcHHHHHHHcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEccccc
Confidence 9999999999999999865422 478889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+.... ........+||+.|||||++. +..|+.++||||+||++|||+||+.||...
T Consensus 172 a~~~~~--------~~~~~~~~~GT~~YmAPE~l~------------~~~y~~~~DiwSlGvilyemltG~~PF~~~--- 228 (350)
T 4b9d_A 172 ARVLNS--------TVELARACIGTPYYLSPEICE------------NKPYNNKSDIWALGCVLYELCTLKHAFEAG--- 228 (350)
T ss_dssp ESCCCH--------HHHHHHHHHSCCTTCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCS---
T ss_pred ceeecC--------CcccccccCCCccccCHHHHC------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc---
Confidence 986511 112234568999999997664 567999999999999999999999999742
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+.......... +.. +..++.++.+++.+||..||++|||++|+++
T Consensus 229 --~~~~~~~~i~~~~~-----~~~------------~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 229 --SMKNLVLKIISGSF-----PPV------------SLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp --SHHHHHHHHHHTCC-----CCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CHHHHHHHHHcCCC-----CCC------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 22222222111110 000 1122456789999999999999999999975
No 29
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2e-47 Score=467.38 Aligned_cols=541 Identities=18% Similarity=0.156 Sum_probs=364.7
Q ss_pred CCCCCCCCCCCCC----CCCeee----eeeecCC---------CCcEEEEeccCCCCCCcccccccCccccccccccccc
Q 001908 47 DPLGVTNSWNNSI----NLCQWA----GVTCGHR---------HQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNN 109 (997)
Q Consensus 47 ~~~~~~~sW~~~~----~~c~w~----gv~C~~~---------~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~ 109 (997)
|+...+++|+.+. +.|.|. -|.|... +..++.|||++|.|++..+.+|.++++|++|||++|+
T Consensus 8 ~~~~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~ 87 (635)
T 4g8a_A 8 DDDDKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCE 87 (635)
T ss_dssp -----------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred CCcchhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCc
Confidence 4444566665432 245543 3567532 1346666666666665445566666666666666666
Q ss_pred cCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccC-cCc
Q 001908 110 FHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTG-MLP 188 (997)
Q Consensus 110 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g-~~p 188 (997)
+++..|.+|++|++|++|+|++|+|++..|..|+++++|++|++++|++. .+|...+..+++|++|+|++|.+++ .+|
T Consensus 88 i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~-~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~ 166 (635)
T 4g8a_A 88 IQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLA-SLENFPIGHLKTLKELNVAHNLIQSFKLP 166 (635)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCC-CSTTCCCTTCTTCCEEECCSSCCCCCCCC
T ss_pred CCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCC-CCChhhhhcCcccCeeccccCccccCCCc
Confidence 66555556666666666666666666333344566666666666666665 3444433456666666666666654 345
Q ss_pred CccCcch-hhhhhccCccccccCCCcccCCCccc----eeeccCCCCCCCCCccccccCCCccEEEecCCcCcCC-CCCC
Q 001908 189 ASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLE----NILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGS-IPES 262 (997)
Q Consensus 189 ~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~----~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~-~p~~ 262 (997)
..++.++ +.+|++++|++++..|..+..+.+++ .++++.|.++ .++...+ ....++.+++++|..+.. .+..
T Consensus 167 ~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~ 244 (635)
T 4g8a_A 167 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAF-KEIRLHKLTLRNNFDSLNVMKTC 244 (635)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTT-TTCEEEEEEEESCCSSHHHHHHH
T ss_pred hhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCccc-ccCcccc-cchhhhhhhhhcccccccccchh
Confidence 5555553 44566666666655555555444433 3455556555 3443333 233445555555544322 2233
Q ss_pred CCCCCCCcEEeccCcc------CCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCC
Q 001908 263 FSNASNIEIIDLPINY------FTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGV 336 (997)
Q Consensus 263 ~~~l~~L~~L~Ls~N~------l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 336 (997)
+..+..++..++..+. +.......+..+..+..+++..+....... .....+..+.+++.+++.+|.+...
T Consensus 245 ~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---~~~~~~~~~~~l~~l~~~~~~~~~~ 321 (635)
T 4g8a_A 245 IQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLD---GIIDLFNCLTNVSSFSLVSVTIERV 321 (635)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEE---ECTTTTGGGTTCSEEEEESCEEEEC
T ss_pred hcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhccccc---chhhhhhhhcccccccccccccccc
Confidence 4455555555543332 222233344455555555555443322111 1123355677888888888888754
Q ss_pred CcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccc--cchhhh
Q 001908 337 LPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQG--NIPSSL 414 (997)
Q Consensus 337 ~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~ 414 (997)
.+.. .. ..++.|++.+|.+.+..+. .+..|+.+++..|.+... ..+..+++|+.|++++|.+.. ..+..+
T Consensus 322 ~~~~--~~-~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~~~ 393 (635)
T 4g8a_A 322 KDFS--YN-FGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQSD 393 (635)
T ss_dssp GGGG--SC-CCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCHHH
T ss_pred cccc--cc-hhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhccccccccccccch
Confidence 4322 22 4688899999988755443 457788999999988743 345678999999999999863 456778
Q ss_pred cCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc-ccccccccccccccCCCcccCCCcccccccccc
Q 001908 415 GNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNL 493 (997)
Q Consensus 415 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L 493 (997)
..+.+|+.|+++.|.+. ..+..+..+++|+.+++++|+.....+. .+..+.++ +.++++.|.+++..|..+..+++|
T Consensus 394 ~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l-~~l~ls~n~l~~~~~~~~~~~~~L 471 (635)
T 4g8a_A 394 FGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL-IYLDISHTHTRVAFNGIFNGLSSL 471 (635)
T ss_dssp HSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTC-CEEECTTSCCEECCTTTTTTCTTC
T ss_pred hhhhhhhhhhccccccc-cccccccccccccchhhhhcccccccccccccccccc-ccccccccccccccccccccchhh
Confidence 88999999999999988 4667788999999999999988766654 45667777 899999999999999999999999
Q ss_pred ceeccccccc-cccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCC
Q 001908 494 VALYISGNQF-SGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSY 572 (997)
Q Consensus 494 ~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~ 572 (997)
+.|+|++|++ .+.+|..|..+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++..|..|..+++|++|||++
T Consensus 472 ~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 551 (635)
T 4g8a_A 472 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSL 551 (635)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECTT
T ss_pred hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECCC
Confidence 9999999985 456788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCcccCCCC-CcC-CCCcceeecCCCCcCCCC
Q 001908 573 NHFDGEVPTK-GVF-SNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 573 N~l~~~~p~~-~~~-~~~~~~~~~~N~~~C~~~ 603 (997)
|+|++.+|.. ..+ .+++.+++.+|||.|+|.
T Consensus 552 N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~ 584 (635)
T 4g8a_A 552 NHIMTSKKQELQHFPSSLAFLNLTQNDFACTCE 584 (635)
T ss_dssp SCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGG
T ss_pred CcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCC
Confidence 9999998865 334 578999999999999873
No 30
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.6e-48 Score=424.58 Aligned_cols=260 Identities=23% Similarity=0.272 Sum_probs=206.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+.|+..++||+|+||+||+|+++.+|+.||||+++.... ..+|++++++++|||||++++++. +++..|+
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~-----~~~~~~i 127 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVR-----EGPWVNI 127 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEE-----ECCEEEE
Confidence 568888999999999999999999999999999974322 246999999999999999999954 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEcccccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGLA 837 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFg~a 837 (997)
|||||+||+|.+++++.+ .+++..++.++.||+.||+|||++ +|+||||||+|||++.+| ++||+|||+|
T Consensus 128 vmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla 198 (336)
T 4g3f_A 128 FMELLEGGSLGQLIKQMG------CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHA 198 (336)
T ss_dssp EECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTC
T ss_pred EEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCC
Confidence 999999999999998765 488999999999999999999999 999999999999999998 6999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+........ .........+||+.|||||++. +..|+.++||||+||++|||+||+.||.......
T Consensus 199 ~~~~~~~~~---~~~~~~~~~~GT~~YmAPE~~~------------~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~ 263 (336)
T 4g3f_A 199 LCLQPDGLG---KSLLTGDYIPGTETHMAPEVVM------------GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263 (336)
T ss_dssp EEC---------------CCCCCCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC
T ss_pred eEccCCCcc---cceecCCccccCccccCHHHHC------------CCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH
Confidence 876332111 1111223467999999997664 5779999999999999999999999997543322
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.+........ ... ..+..+++.+.+++.+||..||++|||+.|+++.|....++.
T Consensus 264 -~~~~i~~~~~----------~~~---------~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~ 318 (336)
T 4g3f_A 264 -LCLKIASEPP----------PIR---------EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEV 318 (336)
T ss_dssp -CHHHHHHSCC----------GGG---------GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -HHHHHHcCCC----------Cch---------hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhh
Confidence 2222111100 000 011233567789999999999999999999999999887765
No 31
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=3.1e-48 Score=431.67 Aligned_cols=277 Identities=21% Similarity=0.313 Sum_probs=216.7
Q ss_pred ChHHHHHHhhcCccCCcccccCcceEEEEEECCC-----CcEEEEEEeccc-chhhHHHHHHHHHHHhhcCC-CCcceEE
Q 001908 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGEN-----GTFVAVKILNLM-QKGALKSFVAECEVLRNTRH-RNLIKII 742 (997)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h-~niv~l~ 742 (997)
+.++++...++|++.++||+|+||+||+|++... ++.||||+++.. .....+.+.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 4455566678999999999999999999998643 368999999743 33456789999999999965 8999999
Q ss_pred eeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcE
Q 001908 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIV 812 (997)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~iv 812 (997)
++|.. ..+..++|||||++|+|.++++..... .....+++.+++.++.|||+||+|||++ +|+
T Consensus 135 g~~~~----~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~ii 207 (353)
T 4ase_A 135 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 207 (353)
T ss_dssp EEECC----TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEEe----cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---Cee
Confidence 99743 345689999999999999999864321 0123488999999999999999999999 999
Q ss_pred ecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccch
Q 001908 813 HGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892 (997)
Q Consensus 813 HrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~D 892 (997)
||||||+|||+++++++||+|||+|+.+.... ........+||+.|||||++. +..|+.++|
T Consensus 208 HRDLK~~NILl~~~~~vKi~DFGlar~~~~~~------~~~~~~~~~gt~~ymAPE~l~------------~~~y~~ksD 269 (353)
T 4ase_A 208 HRDLAARNILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIF------------DRVYTIQSD 269 (353)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHH------------HCCCCHHHH
T ss_pred cCccCccceeeCCCCCEEECcchhhhhcccCC------CceeeccccccccccCHHHHh------------cCCCCCccc
Confidence 99999999999999999999999998663221 112233467999999997765 467999999
Q ss_pred hHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 893 VYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 893 vwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
||||||++|||+| |+.||....... .+...+. +... .+.+..+++++.++|.+||+.|
T Consensus 270 VwS~Gv~l~El~t~G~~Pf~~~~~~~-~~~~~i~--------~g~~------------~~~p~~~~~~~~~li~~c~~~d 328 (353)
T 4ase_A 270 VWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLK--------EGTR------------MRAPDYTTPEMYQTMLDCWHGE 328 (353)
T ss_dssp HHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHH--------HTCC------------CCCCTTCCHHHHHHHHHHTCSS
T ss_pred EeehHHHHHHHHhCCCCCCCCCCHHH-HHHHHHH--------cCCC------------CCCCccCCHHHHHHHHHHcCcC
Confidence 9999999999998 899997542211 1111111 1111 1112234667889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHh
Q 001908 972 PIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 972 P~~Rps~~evl~~L~~~~~~~ 992 (997)
|++|||+.|+++.|+++.++-
T Consensus 329 P~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 329 PSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp GGGSCCHHHHHHHHHHHHHHT
T ss_pred hhHCcCHHHHHHHHHHHHHHh
Confidence 999999999999999988753
No 32
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.5e-48 Score=417.17 Aligned_cols=249 Identities=22% Similarity=0.344 Sum_probs=204.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++|||||+++++ +.+++.
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~-----~~~~~~ 106 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFT-----FQDDEK 106 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEE-----EECSSE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEE-----EEeCCE
Confidence 5799999999999999999999999999999999642 33456789999999999999999999999 556779
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+|||||+||+|.+++.+.+ .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 107 ~yivmEy~~gG~L~~~i~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 107 LYFGLSYAKNGELLKYIRKIG------SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp EEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 999999999999999998765 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.+.... ........+||+.|||||++. +..|+.++||||+||++|||+||+.||...
T Consensus 178 la~~~~~~~------~~~~~~~~~GTp~YmAPEvl~------------~~~y~~~~DiWSlGvilyeml~G~~PF~~~-- 237 (311)
T 4aw0_A 178 TAKVLSPES------KQARANSFVGTAQYVSPELLT------------EKSACKSSDLWALGCIIYQLVAGLPPFRAG-- 237 (311)
T ss_dssp TCEECCTTT------TCCCBCCCCSCGGGCCHHHHH------------HSCBCHHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred CceecCCCC------CcccccCcccCcccCCHHHHc------------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCC--
Confidence 998763211 112234568999999998775 467899999999999999999999999742
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
+..+......... ..+ +....+++.+++.+|+..||++|||++|++
T Consensus 238 ---~~~~~~~~i~~~~------~~~------------p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 238 ---NEGLIFAKIIKLE------YDF------------PEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp ---SHHHHHHHHHHTC------CCC------------CTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred ---CHHHHHHHHHcCC------CCC------------CcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 2222222111110 000 011234567999999999999999999864
No 33
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.9e-47 Score=431.11 Aligned_cols=250 Identities=22% Similarity=0.340 Sum_probs=204.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
+.|+..++||+|+||+||+|+++.+|+.||||+++.......+.+.+|+++|++++|||||++++++. ..+..|+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~-----~~~~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL-----VGDELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEE-----ECCEEEE
Confidence 56999999999999999999999999999999998665555677899999999999999999999954 4568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|||||+||+|.++++... +++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+
T Consensus 226 VmEy~~gG~L~~~i~~~~-------l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~ 295 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTR-------MNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCA 295 (423)
T ss_dssp EEECCTTEEHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHhccC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccce
Confidence 999999999999997653 88999999999999999999999 99999999999999999999999999998
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
.+.. ........+||+.|||||++. +..|+.++||||+||++|||++|+.||...
T Consensus 296 ~~~~--------~~~~~~~~~GTp~YmAPEvl~------------~~~y~~~~DiWSlGvilyeml~G~~PF~~~----- 350 (423)
T 4fie_A 296 QVSK--------EVPRRKSLVGTPYWMAPELIS------------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNE----- 350 (423)
T ss_dssp ECCS--------SCCCBCCCEECTTTCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTS-----
T ss_pred ECCC--------CCccccccccCcCcCCHHHHC------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCc-----
Confidence 7522 112234568999999997664 567999999999999999999999999732
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+..... .....+... ....+.+++.+++.+||..||++|||+.|+++
T Consensus 351 ~~~~~~~~i-----~~~~~~~~~----------~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 351 PPLKAMKMI-----RDNLPPRLK----------NLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp CHHHHHHHH-----HHSCCCCCS----------CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHH-----HcCCCCCCc----------ccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111 111111110 01122456789999999999999999999875
No 34
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=4.4e-47 Score=406.25 Aligned_cols=246 Identities=28% Similarity=0.394 Sum_probs=188.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++|||||+++++ +.+++.
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~-----~~~~~~ 87 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-----IKSKDE 87 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEE-----EECSSE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEE-----EEECCE
Confidence 5899999999999999999999999999999999643 23345678999999999999999999999 455678
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+ +|+|.+++.+.. .+++.+++.++.||+.||+|||++ +|+||||||+|||++.++++||+|||
T Consensus 88 ~~ivmEy~-~g~L~~~l~~~~------~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 88 IIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp EEEEEECC-CEEHHHHHHHSC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred EEEEEeCC-CCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecC
Confidence 99999999 689999998765 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|+.... .......+||+.|||||++. +..| +.++||||+||++|||+||+.||...
T Consensus 158 la~~~~~---------~~~~~~~~GT~~Y~APE~~~------------~~~y~~~~~DiwSlGvily~lltg~~PF~~~- 215 (275)
T 3hyh_A 158 LSNIMTD---------GNFLKTSCGSPNYAAPEVIS------------GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE- 215 (275)
T ss_dssp CC------------------------CTTSCHHHHS------------SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred CCeecCC---------CCccCCeeECcccCChhhhc------------CCCCCCChhhhHHHHHHHHHHHHCCCCCCCC-
Confidence 9986522 11223468999999997764 3444 57999999999999999999999742
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+......... ..+ +....+++.+++.+||+.||++|||++|+++
T Consensus 216 ----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 216 ----SIPVLFKNISNGV------YTL------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----SHHHHHHHHHHTC------CCC------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ----CHHHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 2222222111100 000 0112346779999999999999999999986
No 35
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.2e-47 Score=453.74 Aligned_cols=460 Identities=17% Similarity=0.194 Sum_probs=328.3
Q ss_pred EEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccc
Q 001908 77 TELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRN 156 (997)
Q Consensus 77 ~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n 156 (997)
+.+|++++++++ +|..+. ++|++|||++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999986 887665 89999999999999887889999999999999999999878889999999988888888
Q ss_pred cccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCc
Q 001908 157 NLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPL 236 (997)
Q Consensus 157 ~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~ 236 (997)
++. .+|.. .+++|++|+|++|++++. .+|..|+++++|++|+|++|++++. +
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l----------------------~~p~~~~~l~~L~~L~L~~n~l~~~-~- 162 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVL----------------------PVCKEFGNLTKLTFLGLSAAKFRQL-D- 162 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBC----------------------CCCGGGGGCTTCCEEEEECSBCCTT-T-
T ss_pred cCC-ccCcc---ccccCCEEECCCCCcccc----------------------CchHhhcccCcccEEecCCCccccC-c-
Confidence 877 67766 467777777777777641 2456677777788888888777642 1
Q ss_pred cccccCCCc--cEEEecCCcC--cCCCCCCCCCCC--CCcEEeccCccCCCcccc-cccccCccCeeEccCccCCCCCCC
Q 001908 237 DIGVTLPNL--QVFAIGDNYF--SGSIPESFSNAS--NIEIIDLPINYFTGKVSI-IFGRLKNLWSLDLGINNLGSGGAN 309 (997)
Q Consensus 237 ~~~~~l~~L--~~L~L~~N~l--~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~ 309 (997)
+..+++| ++|++++|.+ ++..|.+|..+. .+ .+++++|.+.+.++. .+..+++|+.|++++|+.... .
T Consensus 163 --~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~--~ 237 (562)
T 3a79_B 163 --LLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQ--R 237 (562)
T ss_dssp --TGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHH--H
T ss_pred --hhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccc--h
Confidence 2244555 8888888888 777787777765 33 567888888775543 567788888888888852100 0
Q ss_pred CcchhhhhccCCCCcEEEeecCccCCCCcccccc--cccccccccccCcccccccCCCC-----CCCCCCCEEeccCCCC
Q 001908 310 DLDFVTILTNCSKLKVLAFEENRLGGVLPHSIAN--LSTTMTDIYMGVNQISGTIPSGI-----GNLVNLNLLGIEFNQL 382 (997)
Q Consensus 310 ~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~--l~~~L~~L~l~~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l 382 (997)
.......+..+++|+.|+++++.+.+.....+.. ...+|++|++++|.++|.+|..+ .+++.|+.++++.|.+
T Consensus 238 l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~ 317 (562)
T 3a79_B 238 LMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF 317 (562)
T ss_dssp HHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC
T ss_pred HHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhhhcccccchheehhhccccee
Confidence 0113445778888888888888776432211110 01267777777777777777766 6666777777777766
Q ss_pred CCCCC-CCcccc---cccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC--
Q 001908 383 TGNIP-REIGQL---RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG-- 456 (997)
Q Consensus 383 ~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-- 456 (997)
.+| ..+..+ .+|++|++++|.+.... ....+++|++|+|++|++++.+|..|.++++|++|+|++|++++
T Consensus 318 --~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 393 (562)
T 3a79_B 318 --LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFF 393 (562)
T ss_dssp --SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTT
T ss_pred --ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcc
Confidence 344 222222 45778888887775321 12567778888888888877777777778888888888887775
Q ss_pred CcccccccccccccccccCCCcccCCCcc-ccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhc
Q 001908 457 AVPQQILTITTLSRFLDLGNNHLNGSLPL-EVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSL 535 (997)
Q Consensus 457 ~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (997)
.+|..+..++++ +.|++++|++++.+|. .+..+++|++|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+
T Consensus 394 ~~~~~~~~l~~L-~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 394 KVALMTKNMSSL-ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp HHHHTTTTCTTC-CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTT
T ss_pred cchhhhcCCCCC-CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhh
Confidence 334566677777 7777777777764444 467777777777777777776666554 67777777777777 566666
Q ss_pred cccCcCCeeeCccccccccCchh-ccCCCCCCEEeCCCCcCcccCCC
Q 001908 536 RSLKSIKELDLSCNNLSGQIPEF-LENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
..+++|+.|+|++|+|++ +|.. +..+++|+.|++++|+++|.+|.
T Consensus 470 ~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 470 THLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp TSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred cCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 677777777777777773 4444 77777777777777777776654
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=8.2e-46 Score=404.06 Aligned_cols=263 Identities=22% Similarity=0.337 Sum_probs=190.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-------
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF------- 750 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------- 750 (997)
++|++.+.||+|+||+||+|+++.+++.||||+++.. .+...+.+.+|++++++++|||||++++++...+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 4699999999999999999999999999999999743 34455788999999999999999999999754321
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
....+.|+|||||++|+|.+++...... ...++..++.++.||+.||+|||++ +|+||||||+|||++.++++|
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vK 158 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTI---EERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVK 158 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSG---GGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCC---ChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEE
Confidence 1234579999999999999999876532 2356777899999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCc----cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 831 VSDFGLARFLFARPFDTS----METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~----~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
|+|||+|+.......... ..........+||+.|||||++. +..|+.++||||+||++|||++
T Consensus 159 l~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~------------~~~y~~~~DiwSlGvilyell~- 225 (299)
T 4g31_A 159 VGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIH------------GNSYSHKVDIFSLGLILFELLY- 225 (299)
T ss_dssp ECCCCCC--------------------------CCCTTSCHHHHT------------TCCCCTHHHHHHHHHHHHHHHS-
T ss_pred EccCccceecCCCccccccccccccccccCCcccCccccCHHHHc------------CCCCCCHHHHHHHHHHHHHHcc-
Confidence 999999987643221111 01112234467999999997664 5679999999999999999996
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
||.... ....... ...... ..+...+..+...+++.+||+.||++|||+.|+++
T Consensus 226 --Pf~~~~----~~~~~~~-----~~~~~~------------~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 226 --PFSTQM----ERVRTLT-----DVRNLK------------FPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp --CCSSHH----HHHHHHH-----HHHTTC------------CCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --CCCCcc----HHHHHHH-----HHhcCC------------CCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 765211 0000000 000000 01122233445678999999999999999999976
No 37
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=8.9e-47 Score=409.46 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=189.7
Q ss_pred hcCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||+||+|+.. .+++.||||+++... ......+.+|++++++++|||||++++++ .++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~-----~~~ 98 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF-----QTE 98 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE-----EET
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE-----EEC
Confidence 57999999999999999999874 467899999996432 22334678899999999999999999995 446
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..|+|||||+||+|.+++.+.. .+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 99 ~~~~ivmEy~~gg~L~~~l~~~~------~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~D 169 (304)
T 3ubd_A 99 GKLYLILDFLRGGDLFTRLSKEV------MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTD 169 (304)
T ss_dssp TEEEEEECCCTTCEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEES
T ss_pred CEEEEEEEcCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecc
Confidence 68999999999999999998765 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... ........+||+.|||||++. +..|+.++||||+||++|||+||+.||...
T Consensus 170 FGla~~~~~--------~~~~~~~~~GT~~YmAPE~~~------------~~~y~~~~DiwSlGvilyemltG~~PF~~~ 229 (304)
T 3ubd_A 170 FGLSKESID--------HEKKAYSFCGTVEYMAPEVVN------------RRGHTQSADWWSFGVLMFEMLTGTLPFQGK 229 (304)
T ss_dssp SEEEEC-------------CCCCSCCCCGGGCCHHHHH------------TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceeccC--------CCccccccccCcccCCHHHhc------------cCCCCCCCcccchHHHHHHHHhCCCCCCCc
Confidence 999986422 112233468999999997765 467899999999999999999999999742
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
+..+......... +.. +..+++++.+++.+||..||++|||+
T Consensus 230 -----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 230 -----DRKETMTMILKAK------LGM------------PQFLSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp -----SHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSSGGGSTTC
T ss_pred -----CHHHHHHHHHcCC------CCC------------CCcCCHHHHHHHHHHcccCHHHCCCC
Confidence 2222222111100 000 11224567899999999999999985
No 38
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.3e-45 Score=427.08 Aligned_cols=423 Identities=23% Similarity=0.272 Sum_probs=269.6
Q ss_pred ccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccccccccccccc
Q 001908 90 LSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYS 169 (997)
Q Consensus 90 ~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~ 169 (997)
|.|.-...++|++|++++|++ |.+|+++++|++|++|+|++|.++|.+|..++++.+|+.+++..|..
T Consensus 3 ~~p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~----------- 70 (454)
T 1jl5_A 3 INPRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD----------- 70 (454)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------
T ss_pred ccccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------
Confidence 344444568888999999988 78898899999999999999999888999999888888777766532
Q ss_pred ccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEE
Q 001908 170 WLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFA 249 (997)
Q Consensus 170 l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~ 249 (997)
.++++|++++|.+++ +|... -++++|++++|++++ +|..+ ++|++|++++|++++ +|.. .++|++|+
T Consensus 71 -~~l~~L~l~~~~l~~-lp~~~--~~L~~L~l~~n~l~~-lp~~~---~~L~~L~l~~n~l~~-l~~~----~~~L~~L~ 137 (454)
T 1jl5_A 71 -RQAHELELNNLGLSS-LPELP--PHLESLVASCNSLTE-LPELP---QSLKSLLVDNNNLKA-LSDL----PPLLEYLG 137 (454)
T ss_dssp -HTCSEEECTTSCCSC-CCSCC--TTCSEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSC-CCSC----CTTCCEEE
T ss_pred -cCCCEEEecCCcccc-CCCCc--CCCCEEEccCCcCCc-ccccc---CCCcEEECCCCccCc-ccCC----CCCCCEEE
Confidence 467889999998886 34422 245678888888887 77643 788999999999983 5532 26899999
Q ss_pred ecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEee
Q 001908 250 IGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFE 329 (997)
Q Consensus 250 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~ 329 (997)
+++|++++ +| +|+++++|++|++++|++++. |.. ..+|++|++++|+++.++ .+.++++|++|+++
T Consensus 138 L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~l-p~~---~~~L~~L~L~~n~l~~l~--------~~~~l~~L~~L~l~ 203 (454)
T 1jl5_A 138 VSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKKL-PDL---PPSLEFIAAGNNQLEELP--------ELQNLPFLTAIYAD 203 (454)
T ss_dssp CCSSCCSS-CC-CCTTCTTCCEEECCSSCCSCC-CCC---CTTCCEEECCSSCCSSCC--------CCTTCTTCCEEECC
T ss_pred CcCCCCCC-Cc-ccCCCCCCCEEECCCCcCccc-CCC---cccccEEECcCCcCCcCc--------cccCCCCCCEEECC
Confidence 99999986 77 599999999999999999874 333 358999999999988743 25788999999999
Q ss_pred cCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccccccccc
Q 001908 330 ENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGN 409 (997)
Q Consensus 330 ~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 409 (997)
+|++++ +|... .+|+.|++++|+++ .+| .++++++|++|++++|++++ +|.. +++|++|++++|++++
T Consensus 204 ~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp-~~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~- 271 (454)
T 1jl5_A 204 NNSLKK-LPDLP----LSLESIVAGNNILE-ELP-ELQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD- 271 (454)
T ss_dssp SSCCSS-CCCCC----TTCCEEECCSSCCS-SCC-CCTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-
T ss_pred CCcCCc-CCCCc----CcccEEECcCCcCC-ccc-ccCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-
Confidence 999986 44322 47888999999988 667 48899999999999999985 4543 4788999999999985
Q ss_pred chhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccc-cccccccccCCCcccCCCccccc
Q 001908 410 IPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTI-TTLSRFLDLGNNHLNGSLPLEVG 488 (997)
Q Consensus 410 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~ll~~L~Ls~N~l~~~~p~~~~ 488 (997)
+|.. +++|+.|++++|++++ +|.. .++|++|++++|++++ ++ .+ .++ +.|++++|++++ +|..
T Consensus 272 l~~~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L-~~L~Ls~N~l~~-lp~~-- 335 (454)
T 1jl5_A 272 LPEL---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LC----DLPPSL-EELNVSNNKLIE-LPAL-- 335 (454)
T ss_dssp CCCC---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-EC----CCCTTC-CEEECCSSCCSC-CCCC--
T ss_pred cCcc---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-cc----CCcCcC-CEEECCCCcccc-cccc--
Confidence 5553 3788999999999886 2321 2678999999998874 33 23 245 888999999885 5654
Q ss_pred cccccceeccccccccccccccccCCcCccEEEccCccccc--cCChhccccCcCCeeeCccccccccCchhccCCCCCC
Q 001908 489 NLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG--SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLE 566 (997)
Q Consensus 489 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 566 (997)
+++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+|.++.. |+.|++.|.+|.. +++|+
T Consensus 336 -~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~ 399 (454)
T 1jl5_A 336 -PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLK 399 (454)
T ss_dssp -CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC----------------
T ss_pred -CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCC
Confidence 478889999999988 5666 46888999999999987 66766554 3456777777764 47889
Q ss_pred EEeCCCCcCcc--cCCCCCcCCCCcceeecCCCCcC
Q 001908 567 YLNLSYNHFDG--EVPTKGVFSNKTRVQLTGNGKLC 600 (997)
Q Consensus 567 ~L~ls~N~l~~--~~p~~~~~~~~~~~~~~~N~~~C 600 (997)
+|++++|++++ .+|. ++..+.+.+|...|
T Consensus 400 ~L~ls~N~l~~~~~iP~-----sl~~L~~~~~~~~~ 430 (454)
T 1jl5_A 400 QLHVETNPLREFPDIPE-----SVEDLRMNSERVVD 430 (454)
T ss_dssp ------------------------------------
T ss_pred EEECCCCcCCccccchh-----hHhheeCcCcccCC
Confidence 99999999987 5663 34455666665544
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.5e-44 Score=431.22 Aligned_cols=451 Identities=19% Similarity=0.179 Sum_probs=354.6
Q ss_pred cccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecc
Q 001908 100 LRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLA 179 (997)
Q Consensus 100 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~ 179 (997)
.+++|+++|+++ .+|..+. ++|++|+|++|.+++..|..++++++|+ +|+|+
T Consensus 33 ~~~l~ls~~~L~-~ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~-------------------------~L~Ls 84 (562)
T 3a79_B 33 ESMVDYSNRNLT-HVPKDLP--PRTKALSLSQNSISELRMPDISFLSELR-------------------------VLRLS 84 (562)
T ss_dssp CCEEECTTSCCC-SCCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCC-------------------------EEECC
T ss_pred CcEEEcCCCCCc-cCCCCCC--CCcCEEECCCCCccccChhhhccCCCcc-------------------------EEECC
Confidence 489999999999 5888765 8999999999999966667787777766 45555
Q ss_pred cccccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCC-CCCccccccCCCccEEEecCCcCcC
Q 001908 180 RNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTG-NLPLDIGVTLPNLQVFAIGDNYFSG 257 (997)
Q Consensus 180 ~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g-~lp~~~~~~l~~L~~L~L~~N~l~~ 257 (997)
+|++++..|..|+.++ +++|+|++|+++ .+|.. .+++|++|+|++|++++ .+|..+ .++++|++|++++|++++
T Consensus 85 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~-~~l~~L~~L~L~~n~l~~ 160 (562)
T 3a79_B 85 HNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEF-GNLTKLTFLGLSAAKFRQ 160 (562)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGG-GGCTTCCEEEEECSBCCT
T ss_pred CCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhh-cccCcccEEecCCCcccc
Confidence 5555554455555542 344555555555 56766 78999999999999985 344554 489999999999999986
Q ss_pred CCCCCCCCCCCC--cEEeccCccC--CCcccccccccC--ccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecC
Q 001908 258 SIPESFSNASNI--EIIDLPINYF--TGKVSIIFGRLK--NLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEEN 331 (997)
Q Consensus 258 ~~p~~~~~l~~L--~~L~Ls~N~l--~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N 331 (997)
. .+..+++| ++|+|++|++ ++..|..|..+. .| .++++.|.+..... ...+..+++|+.|++++|
T Consensus 161 ~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~-----~~~~~~l~~L~~L~l~~n 231 (562)
T 3a79_B 161 L---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQV-----NMSVNALGHLQLSNIKLN 231 (562)
T ss_dssp T---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCC-----EEEESSEEEEEEEEEECC
T ss_pred C---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhh-----hhcccccceEEEeccccc
Confidence 3 45556666 9999999999 888998888765 33 66888888875322 234567889999999999
Q ss_pred cc-----CCCCcccccccccccccccccCccccccc----CCCCCCCCCCCEEeccCCCCCCCCCCCc-----ccccccc
Q 001908 332 RL-----GGVLPHSIANLSTTMTDIYMGVNQISGTI----PSGIGNLVNLNLLGIEFNQLTGNIPREI-----GQLRNLQ 397 (997)
Q Consensus 332 ~l-----~~~~p~~~~~l~~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~ 397 (997)
+. .+. +..+..+ +.++.+++.++.+++.. +..+ ..++|++|++++|+++|.+|..+ .+++.|+
T Consensus 232 ~~~~~~l~~~-~~~l~~l-~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~ 308 (562)
T 3a79_B 232 DENCQRLMTF-LSELTRG-PTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLM 308 (562)
T ss_dssp STTHHHHHHH-HHHHHSC-SSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEE
T ss_pred ccccchHHHH-HHHHhcc-CcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchhee
Confidence 52 211 1233333 45677777776665321 2222 23589999999999999999988 8888888
Q ss_pred eeccccccccccch-hhhcCC---CCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccc
Q 001908 398 AIGLSSNFLQGNIP-SSLGNL---TLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLD 473 (997)
Q Consensus 398 ~L~Ls~N~l~~~~p-~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~ 473 (997)
.++++.|.+ .+| .++..+ .+|+.|++++|.+.... ....+++|++|++++|++++.+|..+..++++ +.|+
T Consensus 309 ~~~~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~ 383 (562)
T 3a79_B 309 IEHVKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRL-QTLI 383 (562)
T ss_dssp EEEEEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSC-CEEE
T ss_pred hhhccccee--ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCC-CEEE
Confidence 888888888 344 444333 67999999999987432 23688999999999999999999999999999 9999
Q ss_pred cCCCcccCC--Cccccccccccceeccccccccccccc-cccCCcCccEEEccCccccccCChhccccCcCCeeeCcccc
Q 001908 474 LGNNHLNGS--LPLEVGNLKNLVALYISGNQFSGEIPV-TLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNN 550 (997)
Q Consensus 474 Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (997)
|++|++++. +|..|+++++|+.|++++|++++.+|. .+..+++|+.|++++|++++.+|..+. ++|+.|+|++|+
T Consensus 384 L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~ 461 (562)
T 3a79_B 384 LQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNR 461 (562)
T ss_dssp CCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSC
T ss_pred CCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCc
Confidence 999999973 357799999999999999999985665 588999999999999999988887665 799999999999
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCcccCCC-CCcCCCCcceeecCCCCcCCC
Q 001908 551 LSGQIPEFLENLSFLEYLNLSYNHFDGEVPT-KGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 551 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~N~~~C~~ 602 (997)
|+ .+|..+..+++|++|+|++|++++.++. ...++.++.+++.+|||.|.|
T Consensus 462 l~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 462 IM-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CC-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred Cc-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 99 7888777999999999999999965554 467788999999999999975
No 40
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-44 Score=400.13 Aligned_cols=296 Identities=32% Similarity=0.570 Sum_probs=214.6
Q ss_pred CCCHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCe--eeeeeecCCC--CcEEEEeccCCCCCC--cccccccCcccccc
Q 001908 29 HTNETDRLALLAIKSQLHDPLGVTNSWNNSINLCQ--WAGVTCGHRH--QRVTELDLRHQNIGG--SLSPYVGNLSFLRY 102 (997)
Q Consensus 29 ~~~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~~c~--w~gv~C~~~~--~~v~~L~L~~~~l~g--~~~~~l~~l~~L~~ 102 (997)
.|.++|++||++||+++.||. .+++|+.+++||. |.||+|+..+ ++|+.|+|++|++.| .+|+.++++++|++
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~ 80 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNF 80 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSE
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCe
Confidence 488999999999999998887 7899988889998 9999998655 899999999999999 89999999999999
Q ss_pred ccccc-cccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccc
Q 001908 103 INLAT-NNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARN 181 (997)
Q Consensus 103 L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N 181 (997)
|+|++ |++.+.+|..|+++++|++|+|++|.++|.+|..++++++|+ +|+|++|
T Consensus 81 L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~-------------------------~L~Ls~N 135 (313)
T 1ogq_A 81 LYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLV-------------------------TLDFSYN 135 (313)
T ss_dssp EEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCC-------------------------EEECCSS
T ss_pred eeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCC-------------------------EEeCCCC
Confidence 99995 999999999999999999999999999999998887776665 5666666
Q ss_pred cccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCC-CccEEEecCCcCcCCCC
Q 001908 182 HLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLP-NLQVFAIGDNYFSGSIP 260 (997)
Q Consensus 182 ~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~-~L~~L~L~~N~l~~~~p 260 (997)
.+++.+| ..+.++++|++|+|++|+++|.+|..++ .++ +|++|++++|++++.+|
T Consensus 136 ~l~~~~p-----------------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~~L~~L~L~~N~l~~~~~ 191 (313)
T 1ogq_A 136 ALSGTLP-----------------------PSISSLPNLVGITFDGNRISGAIPDSYG-SFSKLFTSMTISRNRLTGKIP 191 (313)
T ss_dssp EEESCCC-----------------------GGGGGCTTCCEEECCSSCCEEECCGGGG-CCCTTCCEEECCSSEEEEECC
T ss_pred ccCCcCC-----------------------hHHhcCCCCCeEECcCCcccCcCCHHHh-hhhhcCcEEECcCCeeeccCC
Confidence 6654443 3344445555555555555555555544 333 55666666666666666
Q ss_pred CCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCccc
Q 001908 261 ESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHS 340 (997)
Q Consensus 261 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~ 340 (997)
..|..++ |++|+|++|++++.++..|+.+++|++|+|++|+++.. ++.+..+++|++|
T Consensus 192 ~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-------~~~~~~l~~L~~L-------------- 249 (313)
T 1ogq_A 192 PTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD-------LGKVGLSKNLNGL-------------- 249 (313)
T ss_dssp GGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB-------GGGCCCCTTCCEE--------------
T ss_pred hHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee-------cCcccccCCCCEE--------------
Confidence 6666665 66666666666666666565555555555555555421 1112333444444
Q ss_pred ccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccccc-ccc
Q 001908 341 IANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNF-LQG 408 (997)
Q Consensus 341 ~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~ 408 (997)
++++|+|++.+|..|.++++|++|+|++|+++|.+|.. +.+++|+.|++++|. +.|
T Consensus 250 -----------~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 250 -----------DLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp -----------ECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred -----------ECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 44444444555666666777888888888888777765 777888888888887 554
No 41
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-44 Score=402.85 Aligned_cols=279 Identities=22% Similarity=0.277 Sum_probs=203.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeecc-CcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSI-DFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~-~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|+++.+|+.||||+++.. .....+.+.+|+++|++++|||||++++++... .+.+.+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5799999999999999999999999999999999643 234456788999999999999999999987543 2445678
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+|||||+ |+|.+++.+.. .+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~------~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ------PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 999999995 68999998754 589999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.+..... .........+||+.|||||++.. ...++.++||||+||++|||++|++||.....
T Consensus 204 la~~~~~~~~----~~~~~~~~~~GT~~Y~APEv~~~-----------~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~ 268 (398)
T 4b99_A 204 MARGLCTSPA----EHQYFMTEYVATRWYRAPELMLS-----------LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNY 268 (398)
T ss_dssp TCBCC-----------CCCCCSSCCCCTTCCHHHHTT-----------CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSH
T ss_pred eeeecccCcc----ccccccccceeChHhcCHHHhcC-----------CCCCCChhheehhHHHHHHHHHCCCCCCCCCH
Confidence 9986632211 11223345789999999977642 23468999999999999999999999974311
Q ss_pred CCccHHHHHHhh--cchhhhhhcCc-cc---ccccccchhh---hhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMA--LPEKVMETVDP-SL---LLAWSDGRRR---AKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~--~~~~~~~~~d~-~~---~~~~~~~~~~---~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+....... .+......... .. .......... .......++..+++.+||..||++|||+.|+++
T Consensus 269 ~-~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 269 V-HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp H-HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred H-HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 1 0011111100 00000000000 00 0000000000 000112346779999999999999999999875
No 42
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.9e-43 Score=432.15 Aligned_cols=490 Identities=19% Similarity=0.193 Sum_probs=415.2
Q ss_pred CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhc
Q 001908 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVA 153 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l 153 (997)
.+++.|||++|++++..|.+|.+|++|++|+|++|++++..|..|++|++|++|+|++|++++..|..|+++++|++|++
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 57999999999998877778999999999999999999766678999999999999999999665667999999999999
Q ss_pred ccccccc-cccccccccccccceeecccccccCcCcCccCcchh-----hhhhccCccccccCCCcccCCCccceeeccC
Q 001908 154 YRNNLVG-EIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSI-----IYLHVGENQFSGTVPPSLYNMSSLENILLDV 227 (997)
Q Consensus 154 ~~n~~~g-~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~-----~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~ 227 (997)
++|++.+ .+|..+ ..+++|++|+|++|++++..|..+..+.. ..++++.|.++. ++........++.+++++
T Consensus 156 s~N~l~~~~~~~~~-~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~-i~~~~~~~~~~~~l~l~~ 233 (635)
T 4g8a_A 156 AHNLIQSFKLPEYF-SNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNF-IQPGAFKEIRLHKLTLRN 233 (635)
T ss_dssp CSSCCCCCCCCGGG-GGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCE-ECTTTTTTCEEEEEEEES
T ss_pred ccCccccCCCchhh-ccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccc-cCcccccchhhhhhhhhc
Confidence 9999976 455554 46899999999999999999998887642 246789999985 555566667789999999
Q ss_pred CCCCCCCCccccccCCCccEEEecCCc------CcCCCCCCCCCCCCCcEEeccCccCCCc---ccccccccCccCeeEc
Q 001908 228 NGFTGNLPLDIGVTLPNLQVFAIGDNY------FSGSIPESFSNASNIEIIDLPINYFTGK---VSIIFGRLKNLWSLDL 298 (997)
Q Consensus 228 N~l~g~lp~~~~~~l~~L~~L~L~~N~------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~~~~~~~l~~L~~L~L 298 (997)
|.....++...+..++.++...+..+. +....+..+..+..+..+++..+..... ....+..+.+++.+++
T Consensus 234 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 313 (635)
T 4g8a_A 234 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSL 313 (635)
T ss_dssp CCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEE
T ss_pred ccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccc
Confidence 988766776767788888888775443 4445556777888888888887766543 3445778889999999
Q ss_pred cCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEecc
Q 001908 299 GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIE 378 (997)
Q Consensus 299 s~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 378 (997)
..|.+..+ ..+.....|+.|++++|.+.+..+..+ ..++.+++..|.+... ..+..+++|+.|+++
T Consensus 314 ~~~~~~~~--------~~~~~~~~L~~L~l~~~~~~~~~~~~l----~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls 379 (635)
T 4g8a_A 314 VSVTIERV--------KDFSYNFGWQHLELVNCKFGQFPTLKL----KSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLS 379 (635)
T ss_dssp ESCEEEEC--------GGGGSCCCCSEEEEESCEESSCCCCBC----TTCCEEEEESCCSCCB--CCCCBCTTCCEEECC
T ss_pred cccccccc--------cccccchhhhhhhcccccccCcCcccc----hhhhhcccccccCCCC--cccccccccccchhh
Confidence 99987653 235667899999999999987665543 4577888888887643 345689999999999
Q ss_pred CCCCCC--CCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCC-CCCCCCCCCcEEecCCCccc
Q 001908 379 FNQLTG--NIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIP-PSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 379 ~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~ 455 (997)
+|.+.. ..+..+..+.+|++|+++.|.+. ..+..+..+++|+.+++++|+.....+ ..|.++++++.++++.|.+.
T Consensus 380 ~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~ 458 (635)
T 4g8a_A 380 RNGLSFKGCCSQSDFGTISLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTR 458 (635)
T ss_dssp SSCCBEEEECCHHHHSCSCCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCE
T ss_pred ccccccccccccchhhhhhhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 999963 45666778899999999999998 467788999999999999988775554 56889999999999999999
Q ss_pred CCcccccccccccccccccCCCcc-cCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChh
Q 001908 456 GAVPQQILTITTLSRFLDLGNNHL-NGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLS 534 (997)
Q Consensus 456 ~~~p~~~~~l~~ll~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 534 (997)
+..|..+..++.+ +.|+|++|++ .+..|..|..+++|++|||++|+|++..|..|.++++|++|+|++|+|++..|..
T Consensus 459 ~~~~~~~~~~~~L-~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~ 537 (635)
T 4g8a_A 459 VAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFP 537 (635)
T ss_dssp ECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGG
T ss_pred cccccccccchhh-hhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhH
Confidence 8888888888888 9999999985 4467889999999999999999999999999999999999999999999999999
Q ss_pred ccccCcCCeeeCccccccccCchhccCC-CCCCEEeCCCCcCcccCCC
Q 001908 535 LRSLKSIKELDLSCNNLSGQIPEFLENL-SFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 535 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~ 581 (997)
|..+++|++|||++|+|++.+|..+..+ ++|++|+|++|+|++.+..
T Consensus 538 ~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C~~ 585 (635)
T 4g8a_A 538 YKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEH 585 (635)
T ss_dssp GTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSGGG
T ss_pred HhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccCCc
Confidence 9999999999999999999999999998 6899999999999998763
No 43
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3e-43 Score=409.23 Aligned_cols=412 Identities=25% Similarity=0.265 Sum_probs=273.5
Q ss_pred CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCC-------------eEEEccCCCccccCCc
Q 001908 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRL-------------ETLMLANNSFSGKIPT 140 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------~~L~Ls~N~l~g~iP~ 140 (997)
.+++.|++++|++ |.+|+++++|++|++|+|++|++.|.+|.+++++++| ++|++++|.+++ +|.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCC
Confidence 5799999999999 9999999999999999999999999999999999876 999999999994 666
Q ss_pred cccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCcc
Q 001908 141 NLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSL 220 (997)
Q Consensus 141 ~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L 220 (997)
. .++|++|++++|++.+ +|.. ..+|++|++++|++++ +|... -++.+|++++|++++ +| .++++++|
T Consensus 89 ~---~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~~--~~L~~L~L~~n~l~~-lp-~~~~l~~L 155 (454)
T 1jl5_A 89 L---PPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDLP--PLLEYLGVSNNQLEK-LP-ELQNSSFL 155 (454)
T ss_dssp C---CTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSCC--TTCCEEECCSSCCSS-CC-CCTTCTTC
T ss_pred C---cCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCCC--CCCCEEECcCCCCCC-Cc-ccCCCCCC
Confidence 3 3688999999999997 8864 3689999999999986 33322 246689999999996 88 69999999
Q ss_pred ceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccC
Q 001908 221 ENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGI 300 (997)
Q Consensus 221 ~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 300 (997)
++|++++|++++ +|... ++|++|++++|++++ +| .|+++++|++|++++|++++.+. . .++|++|++++
T Consensus 156 ~~L~l~~N~l~~-lp~~~----~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l~~-~---~~~L~~L~l~~ 224 (454)
T 1jl5_A 156 KIIDVDNNSLKK-LPDLP----PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKLPD-L---PLSLESIVAGN 224 (454)
T ss_dssp CEEECCSSCCSC-CCCCC----TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSCCC-C---CTTCCEEECCS
T ss_pred CEEECCCCcCcc-cCCCc----ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcCCC-C---cCcccEEECcC
Confidence 999999999994 77543 589999999999997 66 69999999999999999997433 2 25899999999
Q ss_pred ccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCC
Q 001908 301 NNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFN 380 (997)
Q Consensus 301 N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 380 (997)
|+++.++ .+..+++|++|++++|++++ +|.. ..+|+.|++++|++++ +|.. .++|++|++++|
T Consensus 225 n~l~~lp--------~~~~l~~L~~L~l~~N~l~~-l~~~----~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N 287 (454)
T 1jl5_A 225 NILEELP--------ELQNLPFLTTIYADNNLLKT-LPDL----PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSEN 287 (454)
T ss_dssp SCCSSCC--------CCTTCTTCCEEECCSSCCSS-CCSC----CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSS
T ss_pred CcCCccc--------ccCCCCCCCEEECCCCcCCc-cccc----ccccCEEECCCCcccc-cCcc---cCcCCEEECcCC
Confidence 9998653 25689999999999999986 4442 2678999999999986 5554 378999999999
Q ss_pred CCCCCCCCCcccccccceeccccccccccchhhhcCC-CCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcc
Q 001908 381 QLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNL-TLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVP 459 (997)
Q Consensus 381 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 459 (997)
++++. |.. .++|++|++++|++++ ++ .+ ++|+.|++++|++++ +|.. +++|++|++++|+++ .+|
T Consensus 288 ~l~~l-~~~---~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp 353 (454)
T 1jl5_A 288 IFSGL-SEL---PPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVP 353 (454)
T ss_dssp CCSEE-SCC---CTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCC
T ss_pred ccCcc-cCc---CCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-ccc
Confidence 99862 221 2689999999999985 33 23 589999999999996 6654 478999999999998 577
Q ss_pred cccccccccccccccCCCcccC--CCccccccccccceeccccccccccccccccCCcCccEEEccCccccc--cCChhc
Q 001908 460 QQILTITTLSRFLDLGNNHLNG--SLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG--SIPLSL 535 (997)
Q Consensus 460 ~~~~~l~~ll~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~ 535 (997)
. .++++ +.|++++|++++ .+|..+.. |+.|.+.|.+|.. +++|+.|++++|++++ .+|.
T Consensus 354 ~---~l~~L-~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~~~~iP~-- 416 (454)
T 1jl5_A 354 E---LPQNL-KQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLREFPDIPE-- 416 (454)
T ss_dssp C---CCTTC-CEEECCSSCCSSCCCCCTTCCE--------EECCC-----------------------------------
T ss_pred c---hhhhc-cEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCccccchh--
Confidence 6 35666 889999999998 67766543 3457777788764 4789999999999997 6664
Q ss_pred cccCcCCeeeCccccccccCchhccCCC
Q 001908 536 RSLKSIKELDLSCNNLSGQIPEFLENLS 563 (997)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 563 (997)
.|+.|.+.+|.+.+.+|.+.....
T Consensus 417 ----sl~~L~~~~~~~~~~~~~~~~~~~ 440 (454)
T 1jl5_A 417 ----SVEDLRMNSERVVDPYEFAHETTD 440 (454)
T ss_dssp ----------------------------
T ss_pred ----hHhheeCcCcccCCccccCHHHhh
Confidence 456678899999887776655443
No 44
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.7e-43 Score=393.73 Aligned_cols=209 Identities=24% Similarity=0.359 Sum_probs=168.8
Q ss_pred HHHhhcCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
+...+.|++.++||+|+||+||+|+.+ .+++.||+|++.... ....+.+|+++++.+ +||||+++++++
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~----- 89 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCF----- 89 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEE-----
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEE-----
Confidence 345678999999999999999999874 457899999986443 235678999999998 699999999984
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVA 829 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~ 829 (997)
...++.|+||||+++|+|.+++.. +++.+++.++.|++.||+|||++ +|+||||||+|||++.+ +.+
T Consensus 90 ~~~~~~~lvmE~~~g~~L~~~~~~---------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~ 157 (361)
T 4f9c_A 90 RKNDHVVIAMPYLEHESFLDILNS---------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKY 157 (361)
T ss_dssp EETTEEEEEEECCCCCCHHHHHTT---------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEE
T ss_pred EECCEEEEEEeCCCcccHHHHHcC---------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeE
Confidence 456799999999999999999842 78889999999999999999999 99999999999999877 899
Q ss_pred EEcccccchhcccCCCCCc--------------------cccccccccccccccccCCcchhcccccCccccCCCCCCCc
Q 001908 830 HVSDFGLARFLFARPFDTS--------------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV 889 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~--------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~ 889 (997)
||+|||+|+.......... ..........+||+.|||||++.. ...|+.
T Consensus 158 kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----------~~~y~~ 226 (361)
T 4f9c_A 158 ALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-----------CPNQTT 226 (361)
T ss_dssp EECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT-----------CSCCCT
T ss_pred EECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC-----------CCCCCC
Confidence 9999999986533211100 001112234579999999987642 234889
Q ss_pred cchhHHHHHHHHHHHhCCCCCCcC
Q 001908 890 TGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 890 ~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
++||||+||++|||+||+.||...
T Consensus 227 ~~DiWSlG~il~ell~G~~Pf~~~ 250 (361)
T 4f9c_A 227 AIDMWSAGVIFLSLLSGRYPFYKA 250 (361)
T ss_dssp HHHHHHHHHHHHHHHHTCSSSSCC
T ss_pred ccchhhhHHHHHHHHHCCCCCCCC
Confidence 999999999999999999999643
No 45
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.9e-42 Score=405.40 Aligned_cols=377 Identities=19% Similarity=0.195 Sum_probs=269.6
Q ss_pred eeecccccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCc
Q 001908 175 HISLARNHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNY 254 (997)
Q Consensus 175 ~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~ 254 (997)
.++.+++.++ .+|. +. -++++|+|++|++++..|..|.++++|++|+|++|.+.+.+|...+..+++|++|+|++|+
T Consensus 14 ~~~c~~~~l~-~lp~-l~-~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~ 90 (455)
T 3v47_A 14 NAICINRGLH-QVPE-LP-AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQ 90 (455)
T ss_dssp EEECCSSCCS-SCCC-CC-TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCT
T ss_pred ccCcCCCCcc-cCCC-CC-CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCc
Confidence 4555555554 3443 21 1344566666666666677777777888888888877777776666677778888888887
Q ss_pred CcCCCCCCCCCCCCCcEEeccCccCCCccccc--ccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCc
Q 001908 255 FSGSIPESFSNASNIEIIDLPINYFTGKVSII--FGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENR 332 (997)
Q Consensus 255 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~ 332 (997)
+++..|..|+++++|++|+|++|++++..+.. |+.+++|++|+|++|+++.+.+. ..+.++++|++|++++|+
T Consensus 91 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 91 FLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPA-----SFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp TCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCC-----GGGGGCTTCCEEECTTCC
T ss_pred cCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcc-----cccCCCCcccEEeCCCCc
Confidence 77777777777888888888888777644433 77777777777777777654332 124566677777777766
Q ss_pred cCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCC--------cccccccceeccccc
Q 001908 333 LGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPRE--------IGQLRNLQAIGLSSN 404 (997)
Q Consensus 333 l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--------~~~l~~L~~L~Ls~N 404 (997)
+++..|..+..+. ..+|+.|++++|.+.+..+.. +..+++|++|+|++|
T Consensus 166 l~~~~~~~l~~l~-----------------------~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n 222 (455)
T 3v47_A 166 VKSICEEDLLNFQ-----------------------GKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGN 222 (455)
T ss_dssp BSCCCTTTSGGGT-----------------------TCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTS
T ss_pred ccccChhhhhccc-----------------------cccccccccccCcccccchhhccccccccccccceeeeEecCCC
Confidence 6666555554431 034555555555555433332 224556666677777
Q ss_pred cccccchhhhcCC---CCCCeEEeecCcCCCC----------CCCCCCC--CCCCcEEecCCCcccCCcccccccccccc
Q 001908 405 FLQGNIPSSLGNL---TLMTDLFLSSNHLQGN----------IPPSLGN--CKNLVSLNLSDNKLIGAVPQQILTITTLS 469 (997)
Q Consensus 405 ~l~~~~p~~~~~l---~~L~~L~Ls~N~l~~~----------~p~~~~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~ll 469 (997)
++++..|..+..+ ++|+.|++++|.+.+. .+..+.. .++|++|++++|++.+..|..+..++++
T Consensus 223 ~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L- 301 (455)
T 3v47_A 223 GFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDL- 301 (455)
T ss_dssp CCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTC-
T ss_pred cccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCC-
Confidence 6666666655443 6666677766654432 2223332 2578888888888888888888888888
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|
T Consensus 302 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 381 (455)
T 3v47_A 302 EQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTN 381 (455)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCC
Confidence 88888888888888888889999999999999998888888999999999999999999888889999999999999999
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCCCCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKG 583 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~ 583 (997)
+|++..+..+..+++|++|++++|+++|.+|...
T Consensus 382 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 382 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred ccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9997777778899999999999999999888653
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=8.1e-43 Score=410.10 Aligned_cols=250 Identities=24% Similarity=0.329 Sum_probs=196.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHH---HHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFV---AECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
++|++.+.||+|+||+||+|+.+.+|+.||||+++... ......+. .++++++.++|||||+++++ +.+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~-----f~~ 263 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYA-----FHT 263 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEE-----EEC
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEE-----EEE
Confidence 68999999999999999999999999999999996321 12223333 34566677899999999998 556
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..|+|||||+||+|.+++.+.. .+++..++.++.||+.||+|||++ +||||||||+|||++.+|++||+
T Consensus 264 ~~~lylVmEy~~GGdL~~~l~~~~------~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~ 334 (689)
T 3v5w_A 264 PDKLSFILDLMNGGDLHYHLSQHG------VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRIS 334 (689)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CCEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEec
Confidence 779999999999999999998765 488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+.... ......+||+.|||||++.. +..|+.++||||+||++|||++|++||..
T Consensus 335 DFGlA~~~~~----------~~~~t~~GTp~YmAPEvl~~-----------~~~y~~~vDiWSLGvilYEmLtG~~PF~~ 393 (689)
T 3v5w_A 335 DLGLACDFSK----------KKPHASVGTHGYMAPEVLQK-----------GVAYDSSADWFSLGCMLFKLLRGHSPFRQ 393 (689)
T ss_dssp CCTTCEECSS----------CCCCSCCSCGGGCCHHHHST-----------TCCCCTHHHHHHHHHHHHHHHHSSCTTCG
T ss_pred ccceeeecCC----------CCCCCccCCcCccCHHHHhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 9999986522 12234689999999977642 35689999999999999999999999975
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
.... ...+........ .... +....+++.+++.+|+..||++|++ ++||++
T Consensus 394 ~~~~--~~~~i~~~i~~~------~~~~------------p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 394 HKTK--DKHEIDRMTLTM------AVEL------------PDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp GGCC--CHHHHHHHHHHC------CCCC------------CTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CChH--HHHHHHHhhcCC------CCCC------------CccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 3222 122221111100 0000 0112345679999999999999998 577643
No 47
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.5e-42 Score=401.47 Aligned_cols=395 Identities=17% Similarity=0.202 Sum_probs=244.4
Q ss_pred CCCeeee--eeecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCcccc
Q 001908 60 NLCQWAG--VTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGK 137 (997)
Q Consensus 60 ~~c~w~g--v~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 137 (997)
..|.|.+ |.|+. +++ ..+|. + .++|++|||++|++++..|..|+++++|++|+|++|.+.+.
T Consensus 6 ~~c~~~~~~~~c~~------------~~l-~~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~ 69 (455)
T 3v47_A 6 SECSVIGYNAICIN------------RGL-HQVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV 69 (455)
T ss_dssp -CCEEETTEEECCS------------SCC-SSCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE
T ss_pred ceeEEEccccCcCC------------CCc-ccCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce
Confidence 4577776 66753 333 24555 2 27899999999999988889999999999999999999877
Q ss_pred CC-ccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcch-hhhhhccCccccccCCCc--
Q 001908 138 IP-TNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPS-- 213 (997)
Q Consensus 138 iP-~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~-- 213 (997)
+| ..++++++|+ +|+|++|++++..|..|+.++ +++|++++|++++.+|..
T Consensus 70 i~~~~~~~l~~L~-------------------------~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 124 (455)
T 3v47_A 70 IRNNTFRGLSSLI-------------------------ILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNF 124 (455)
T ss_dssp ECTTTTTTCTTCC-------------------------EEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSST
T ss_pred ECcccccccccCC-------------------------EEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCccc
Confidence 75 4566666665 555555555444344433332 223334444443333322
Q ss_pred ccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCC--CCCcEEeccCccCCCcccccccccC
Q 001908 214 LYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNA--SNIEIIDLPINYFTGKVSIIFGRLK 291 (997)
Q Consensus 214 l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~ 291 (997)
+.++++|++|+|++|++++..|..++..+++|++|++++|++++..|..+..+ .+|+.|++++|.+++..+..++.
T Consensus 125 ~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~-- 202 (455)
T 3v47_A 125 FKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW-- 202 (455)
T ss_dssp TTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH--
T ss_pred ccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc--
Confidence 55566666666666666654455544455666666666666655555555544 45555555555555444332210
Q ss_pred ccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccc--cccccccccCcccccccCCCCCCC
Q 001908 292 NLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLS--TTMTDIYMGVNQISGTIPSGIGNL 369 (997)
Q Consensus 292 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~~L~~L~l~~N~l~~~~p~~~~~l 369 (997)
.....+..+++|++|++++|++++..|..+.... .+++.|++++|.+.+..
T Consensus 203 --------------------~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~------- 255 (455)
T 3v47_A 203 --------------------EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSS------- 255 (455)
T ss_dssp --------------------HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCC-------
T ss_pred --------------------cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccc-------
Confidence 0001122344555555555555555554443321 33445555544433211
Q ss_pred CCCCEEeccCCCCCCCCCCCcccc--cccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEE
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQL--RNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSL 447 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 447 (997)
+..+.+.+..+..+..+ ++|++|+|++|++++.+|..+..+++|+.|+|++|++++..|..|.++++|++|
T Consensus 256 -------~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 328 (455)
T 3v47_A 256 -------FGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKL 328 (455)
T ss_dssp -------TTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred -------cchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEE
Confidence 11222222333333332 467777777777776667777777777777777777776667777777777777
Q ss_pred ecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccc
Q 001908 448 NLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSF 527 (997)
Q Consensus 448 ~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 527 (997)
+|++|++++..|..+..++++ +.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|++++|++
T Consensus 329 ~Ls~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 407 (455)
T 3v47_A 329 NLSQNFLGSIDSRMFENLDKL-EVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 407 (455)
T ss_dssp ECCSSCCCEECGGGGTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECCCCccCCcChhHhcCcccC-CEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCc
Confidence 777777766666666777776 7777777777777788888888899999999998876666778889999999999999
Q ss_pred cccCC
Q 001908 528 RGSIP 532 (997)
Q Consensus 528 ~~~~p 532 (997)
++..|
T Consensus 408 ~~~~~ 412 (455)
T 3v47_A 408 DCSCP 412 (455)
T ss_dssp CCCTT
T ss_pred ccCCC
Confidence 88776
No 48
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=2.8e-41 Score=401.64 Aligned_cols=252 Identities=19% Similarity=0.274 Sum_probs=204.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||+||+|+++.+|+.||+|++........+.+.+|+++|+.++|||||+++++ +.+....|+
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~-----~~~~~~~~i 231 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVM 231 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEE-----EECSSEEEE
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEE-----EEECCEEEE
Confidence 689999999999999999999999999999999986666666788999999999999999999999 455679999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC--CcEEEccccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD--MVAHVSDFGL 836 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~--~~~kl~DFg~ 836 (997)
|||||+||+|.+++....+ .+++.++..++.||+.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 232 v~E~~~gg~L~~~i~~~~~-----~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~ 303 (573)
T 3uto_A 232 IYEFMSGGELFEKVADEHN-----KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGL 303 (573)
T ss_dssp EEECCCCCBHHHHHTCTTS-----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSS
T ss_pred EEeecCCCcHHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccc
Confidence 9999999999999976432 488999999999999999999999 99999999999999854 8999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+.+.. .......+||+.|||||++. +..|+.++||||+||++|||++|+.||....
T Consensus 304 a~~~~~---------~~~~~~~~GT~~y~APEv~~------------~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~-- 360 (573)
T 3uto_A 304 TAHLDP---------KQSVKVTTGTAEFAAPEVAE------------GKPVGYYTDMWSVGVLSYILLSGLSPFGGEN-- 360 (573)
T ss_dssp CEECCT---------TSEEEEECSSGGGCCHHHHT------------TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS--
T ss_pred eeEccC---------CCceeeeEECccccCHHHhC------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--
Confidence 987622 12234468999999997664 5678999999999999999999999997431
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.......... ...++. ......+..+++.+||..||++|||+.|+++
T Consensus 361 ---~~~~~~~i~~~~~-~~~~~~-------------~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 361 ---DDETLRNVKSCDW-NMDDSA-------------FSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp ---HHHHHHHHHTTCC-CCCSGG-------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ---HHHHHHHHHhCCC-CCCccc-------------ccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1222111110000 000000 0112345678999999999999999999976
No 49
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=5.5e-41 Score=369.02 Aligned_cols=283 Identities=26% Similarity=0.406 Sum_probs=210.6
Q ss_pred hhcCccCCcccccCcceEEEEE----ECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGI----LGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.++||+|+||+||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++... +.
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~ 85 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---GR 85 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH---HH
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---CC
Confidence 4689999999999999999998 4568899999999877667778899999999999999999999987532 23
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++|+|.+++..... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 86 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 157 (295)
T 3ugc_A 86 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 157 (295)
T ss_dssp TSCEEEEECCTTCBHHHHHHHCGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC
T ss_pred CceEEEEEeCCCCCHHHHHHhccc-----ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEcc
Confidence 458999999999999999987542 388999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+...... ..........+|..|+|||.+. +..++.++|||||||++|||+||..|+...
T Consensus 158 fg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~l~~g~~~~~~~ 220 (295)
T 3ugc_A 158 FGLTKVLPQDK-----EFFKVKEPGESPIFWYAPESLT------------ESKFSVASDVWSFGVVLYELFTYIEKSKSP 220 (295)
T ss_dssp CCSCC------------------CTTCGGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHHTTCTTCSH
T ss_pred CcccccccCCc-----ceeeeccCCCCccceeCcHHhc------------CCCCChHHHHHHHHHHHHHHHhcccccCCC
Confidence 99998753221 1111223345778899997765 456899999999999999999999998632
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
. .++...........................+.+..++.++.+++.+||+.||++|||++|+++.|+++.+++.
T Consensus 221 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~l~ 294 (295)
T 3ugc_A 221 P------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDNMA 294 (295)
T ss_dssp H------HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred h------HHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhcc
Confidence 1 1111111000000000000000001111112233456788999999999999999999999999999988764
Q ss_pred c
Q 001908 994 G 994 (997)
Q Consensus 994 ~ 994 (997)
+
T Consensus 295 g 295 (295)
T 3ugc_A 295 G 295 (295)
T ss_dssp -
T ss_pred C
Confidence 3
No 50
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-39 Score=379.10 Aligned_cols=363 Identities=18% Similarity=0.211 Sum_probs=227.0
Q ss_pred CCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhccccccccccccc
Q 001908 86 IGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPED 165 (997)
Q Consensus 86 l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~ 165 (997)
..+..+..++++++|++|||++|++++ +| .++.+++|++|+|++|.+++ +| ++++++|+
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~---------------- 88 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLT---------------- 88 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCS----------------
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCC----------------
Confidence 344455567777777777777777775 35 57777777777777777774 33 55554444
Q ss_pred ccccccccceeecccccccCcCcCccCcc-hhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCC
Q 001908 166 IGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPN 244 (997)
Q Consensus 166 ~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~ 244 (997)
+|+|++|++++. | ++++ ++++|++++|++++ +| ++++++|++|++++|++++ +| ...+++
T Consensus 89 ---------~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~-l~---l~~l~~ 149 (457)
T 3bz5_A 89 ---------YLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTE-ID---VSHNTQ 149 (457)
T ss_dssp ---------EEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSC-CC---CTTCTT
T ss_pred ---------EEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCccce-ec---cccCCc
Confidence 444444444431 1 2222 12223333333332 22 5555666666666666664 33 224566
Q ss_pred ccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCc
Q 001908 245 LQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLK 324 (997)
Q Consensus 245 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~ 324 (997)
|++|++++|+..+.+ .++.+++|++|++++|++++.. ++.+++|+.|++++|+++.++ +..+++|+
T Consensus 150 L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l~---l~~l~~L~~L~l~~N~l~~~~---------l~~l~~L~ 215 (457)
T 3bz5_A 150 LTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITELD---VSQNKLLNRLNCDTNNITKLD---------LNQNIQLT 215 (457)
T ss_dssp CCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCCC---CTTCTTCCEEECCSSCCSCCC---------CTTCTTCS
T ss_pred CCEEECCCCCccccc--ccccCCcCCEEECCCCccceec---cccCCCCCEEECcCCcCCeec---------cccCCCCC
Confidence 666666666444444 3555566666666666665532 455555555555555554421 23344444
Q ss_pred EEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccc
Q 001908 325 VLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSN 404 (997)
Q Consensus 325 ~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 404 (997)
+| ++++|++++ +| ++.+++|++|++++|++++.. ++.+++|+.|++++|
T Consensus 216 ~L-------------------------~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n 264 (457)
T 3bz5_A 216 FL-------------------------DCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQT 264 (457)
T ss_dssp EE-------------------------ECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTC
T ss_pred EE-------------------------ECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCC
Confidence 44 444444443 33 556677777777777777643 344566667766654
Q ss_pred cccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCc
Q 001908 405 FLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLP 484 (997)
Q Consensus 405 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p 484 (997)
+|+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|.. ...+ +.|++++|
T Consensus 265 --------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~---~~~L-~~L~l~~~------- 317 (457)
T 3bz5_A 265 --------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ---AAGI-TELDLSQN------- 317 (457)
T ss_dssp --------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT---TCCC-SCCCCTTC-------
T ss_pred --------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC---CCcc-eEechhhc-------
Confidence 34567777777776666 467788888888888877777743 2333 55555554
Q ss_pred cccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCC
Q 001908 485 LEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSF 564 (997)
Q Consensus 485 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 564 (997)
++|++|++++|++++. + ++++++|+.|++++|+|++ ++.|..|++++|+++|. ..+..
T Consensus 318 ------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~ 375 (457)
T 3bz5_A 318 ------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTIT 375 (457)
T ss_dssp ------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEE
T ss_pred ------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeee
Confidence 6889999999999873 3 8889999999999999985 35677788999999876 34566
Q ss_pred CCEEeCCCCcCcccCCCC
Q 001908 565 LEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 565 L~~L~ls~N~l~~~~p~~ 582 (997)
|+.+++++|+++|.+|..
T Consensus 376 l~~l~l~~N~l~g~ip~~ 393 (457)
T 3bz5_A 376 MPKETLTNNSLTIAVSPD 393 (457)
T ss_dssp CCCBCCBTTBEEEECCTT
T ss_pred cCccccccCcEEEEcChh
Confidence 888899999999999864
No 51
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.9e-40 Score=367.79 Aligned_cols=287 Identities=23% Similarity=0.286 Sum_probs=210.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||+||+|++. ++.||||+++.... ......+|+.++++++||||+++++++.... ......+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~~~~~ 98 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGT-SVDVDLW 98 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-SSSEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCC-CCCceEE
Confidence 468999999999999999999984 79999999975433 3345567899999999999999999976532 1244589
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhC-------CCCCcEecCCCCCCeeeCCCCcEE
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH-------CQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~-------~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
+||||+++|+|.++++... +++..++.++.|++.||+|||+. +.++|+||||||+||+++.++.+|
T Consensus 99 lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~k 171 (322)
T 3soc_A 99 LITAFHEKGSLSDFLKANV-------VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTAC 171 (322)
T ss_dssp EEEECCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEE
T ss_pred EEEecCCCCCHHHHHHhcC-------CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEE
Confidence 9999999999999998753 88999999999999999999986 234799999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+....... ........||+.|+|||++.... .....++.++|||||||++|||+||+.||
T Consensus 172 L~DFg~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~-------~~~~~~~~~~DiwslG~il~el~tg~~pf 238 (322)
T 3soc_A 172 IADFGLALKFEAGKS------AGDTHGQVGTRRYMAPEVLEGAI-------NFQRDAFLRIDMYAMGLVLWELASRCTAA 238 (322)
T ss_dssp ECCCTTCEEECTTSC------CCCCTTCCCCGGGCCHHHHTTCC-------CCCHHHHHHHHHHHHHHHHHHHHTTBTTS
T ss_pred EccCCcccccccccC------ccccccCccCccccCHhhccccc-------ccCcCCCccchhHHHHHHHHHHHhCCCCC
Confidence 999999987632211 11223357999999998876311 11235677899999999999999999999
Q ss_pred CcCcCCCc-cHHHHHHhh-cchhhhhhc-CcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 911 NCMFQGGL-TLHEFCKMA-LPEKVMETV-DPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 911 ~~~~~~~~-~~~~~~~~~-~~~~~~~~~-d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
........ ......... ......... ......... .......++.++.+++.+||+.||++|||+.|+++.|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 315 (322)
T 3soc_A 239 DGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLR---DYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQ 315 (322)
T ss_dssp SSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCC---GGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcchhccchhhhhccCCchhhhhhhhhcccCCCCcc---ccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 75433221 111110000 000111111 000000000 011123456779999999999999999999999999999
Q ss_pred HHHH
Q 001908 988 ARQT 991 (997)
Q Consensus 988 ~~~~ 991 (997)
+.+.
T Consensus 316 l~~~ 319 (322)
T 3soc_A 316 MQRL 319 (322)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8753
No 52
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.4e-40 Score=363.21 Aligned_cols=269 Identities=25% Similarity=0.398 Sum_probs=214.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|.+.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++.. .+..+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 83 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-----DKRLN 83 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec-----CCeeE
Confidence 3678999999999999999999999999999999977667777899999999999999999999999653 45899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++..... .+++.+++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 84 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~ 155 (310)
T 3s95_A 84 FITEYIKGGTLRGIIKSMDS-----QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLA 155 (310)
T ss_dssp EEEECCTTCBHHHHHHHCCT-----TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccc
Confidence 99999999999999987532 488999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCcc------ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 838 RFLFARPFDTSM------ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 838 ~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+........... ..........||+.|+|||++. +..++.++|||||||++|||++|..||.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~~l~el~~g~~~~~ 223 (310)
T 3s95_A 156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMIN------------GRSYDEKVDVFSFGIVLCEIIGRVNADP 223 (310)
T ss_dssp EECC--------------------CCCCSCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHTCCSST
T ss_pred eecccccccccccccccccccccccccCCCcceeCHHHhc------------CCCCCcHHHHHHHHHHHHHHhcCCCCCc
Confidence 876332211100 0111122467999999997654 5678999999999999999999999987
Q ss_pred cCcCCCc----cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 912 CMFQGGL----TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 912 ~~~~~~~----~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
....... ......... .+..++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~ 279 (310)
T 3s95_A 224 DYLPRTMDFGLNVRGFLDRY------------------------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLET 279 (310)
T ss_dssp TTSCBCTTSSBCHHHHHHHT------------------------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred chhhhHHHHhhhhhcccccc------------------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 4322111 111110000 011234567899999999999999999999999999
Q ss_pred HHHHhhcc
Q 001908 988 ARQTLVGR 995 (997)
Q Consensus 988 ~~~~~~~~ 995 (997)
+.....+.
T Consensus 280 l~~~~~~~ 287 (310)
T 3s95_A 280 LRMHLAGH 287 (310)
T ss_dssp HHHHHHHC
T ss_pred HHHhccCc
Confidence 98876543
No 53
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=5e-40 Score=365.97 Aligned_cols=284 Identities=33% Similarity=0.494 Sum_probs=223.7
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++..++++|+..+.||+|+||+||+|+++ +++.||||++........+.+.+|++++++++||||+++++++ .
T Consensus 32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-----~ 105 (321)
T 2qkw_B 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC-----D 105 (321)
T ss_dssp SCCCCCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC-----C
T ss_pred HHHHHHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----c
Confidence 344557789999999999999999999976 7899999999866666678899999999999999999999995 4
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
..+..++||||+++|+|.+++..... ....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 106 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl 180 (321)
T 2qkw_B 106 ERNEMILIYKYMENGNLKRHLYGSDL--PTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKI 180 (321)
T ss_dssp CTTCCEEEEECCTTCBTGGGSSSSCC--CSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEE
T ss_pred CCCeEEEEEEcCCCCcHHHHHhccCC--CccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEE
Confidence 45688999999999999999976542 123589999999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+++...... .........||+.|+|||++. +..++.++|||||||++|||+||+.||.
T Consensus 181 ~Dfg~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell~g~~p~~ 242 (321)
T 2qkw_B 181 TDFGISKKGTELD------QTHLSTVVKGTLGYIDPEYFI------------KGRLTEKSDVYSFGVVLFEVLCARSAIV 242 (321)
T ss_dssp CCCTTCEECSSSS------CCCCBCCCEEETTTCCHHHHH------------HCBCCTHHHHHHHHHHHHHHHHCCTTCS
T ss_pred eeccccccccccc------ccccccccCCCccccCHHHhc------------CCCCCcccchHhHHHHHHHHHhCCCccc
Confidence 9999997642211 111223456899999997764 3568899999999999999999999997
Q ss_pred cCcCC-CccHHHHHHhh-cchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 912 CMFQG-GLTLHEFCKMA-LPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 912 ~~~~~-~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
..... .....++.... ........+++... .....+++.++.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 243 QSLPREMVNLAEWAVESHNNGQLEQIVDPNLA--------DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp CSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCT--------TCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHHHhhhccccccHHHhcChhhc--------cccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 54332 22333332211 11122222333221 1223466788999999999999999999999999999987
Q ss_pred HHh
Q 001908 990 QTL 992 (997)
Q Consensus 990 ~~~ 992 (997)
...
T Consensus 315 ~~~ 317 (321)
T 2qkw_B 315 RLQ 317 (321)
T ss_dssp HSS
T ss_pred hcc
Confidence 543
No 54
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=5.7e-39 Score=373.50 Aligned_cols=354 Identities=17% Similarity=0.160 Sum_probs=289.4
Q ss_pred CcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhc
Q 001908 74 QRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVA 153 (997)
Q Consensus 74 ~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l 153 (997)
.+++.|||++|++++. | .++.+++|++|+|++|++++ +| ++.+++|++|+|++|.+++ +| ++++++|++|++
T Consensus 42 ~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L 113 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNC 113 (457)
T ss_dssp TTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEEC
T ss_pred CCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEEC
Confidence 4799999999999874 4 79999999999999999997 45 9999999999999999996 55 899999999999
Q ss_pred ccccccccccccccccccccceeecccccccCcCcCccCcc-hhhhhhccCccccccCCCcccCCCccceeeccCCCCCC
Q 001908 154 YRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTG 232 (997)
Q Consensus 154 ~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g 232 (997)
++|++.+ +| ...+++|++|++++|++++. | ++.+ ++.+|++++|+..+.+ .+..+++|++|++++|++++
T Consensus 114 ~~N~l~~-l~---~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~ 184 (457)
T 3bz5_A 114 DTNKLTK-LD---VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE 184 (457)
T ss_dssp CSSCCSC-CC---CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC
T ss_pred CCCcCCe-ec---CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce
Confidence 9999986 55 34688999999999999974 3 6666 3567888888777776 47888889999999999885
Q ss_pred CCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcc
Q 001908 233 NLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLD 312 (997)
Q Consensus 233 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 312 (997)
+| +..+++|+.|++++|++++. .++.+++|++|+|++|++++. | ++.+++|++|++++|+++.++.
T Consensus 185 -l~---l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~i-p--~~~l~~L~~L~l~~N~l~~~~~---- 250 (457)
T 3bz5_A 185 -LD---VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTEI-D--VTPLTQLTYFDCSVNPLTELDV---- 250 (457)
T ss_dssp -CC---CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCCCC----
T ss_pred -ec---cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCccccc-C--ccccCCCCEEEeeCCcCCCcCH----
Confidence 66 34788899999999988875 488888899999999998884 3 7888889999999998887542
Q ss_pred hhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccc
Q 001908 313 FVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQ 392 (997)
Q Consensus 313 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 392 (997)
..+++|+.|++++|+ |+.|++++|.+.+.+| ++++++|+.|++++|.+.+.+|. .
T Consensus 251 -----~~l~~L~~L~l~~n~---------------L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~ 305 (457)
T 3bz5_A 251 -----STLSKLTTLHCIQTD---------------LLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---Q 305 (457)
T ss_dssp -----TTCTTCCEEECTTCC---------------CSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---T
T ss_pred -----HHCCCCCEEeccCCC---------------CCEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---C
Confidence 467788888887764 4567888888888887 57788999999999988887774 3
Q ss_pred ccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccccccccc
Q 001908 393 LRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFL 472 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L 472 (997)
..+|+.|++++| ++|+.|+|++|+|++. + ++++++|+.|++++|++++ + +.+ ..|
T Consensus 306 ~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-l-------~~L-~~L 360 (457)
T 3bz5_A 306 AAGITELDLSQN-------------PKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-F-------SSV-GKI 360 (457)
T ss_dssp TCCCSCCCCTTC-------------TTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-C-------TTG-GGS
T ss_pred CCcceEechhhc-------------ccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-c-------ccc-ccc
Confidence 466777776665 6889999999999974 3 8899999999999999985 2 344 678
Q ss_pred ccCCCcccCCCccccccccccceeccccccccccccccccC
Q 001908 473 DLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTG 513 (997)
Q Consensus 473 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 513 (997)
++++|+++|. +.+..|+.+++++|+++|.+|..+..
T Consensus 361 ~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~~ 396 (457)
T 3bz5_A 361 PALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLLD 396 (457)
T ss_dssp SGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCBC
T ss_pred cccCCcEEec-----ceeeecCccccccCcEEEEcChhHhc
Confidence 8888988875 35677888899999999988876543
No 55
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=9.9e-40 Score=359.03 Aligned_cols=251 Identities=24% Similarity=0.357 Sum_probs=203.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||+||+|.+..+++.||||++........+.+.+|+.++++++||||+++++++.. .+..+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-----~~~~~ 93 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLV-----GDELW 93 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEE-----CCEEE
Confidence 3689999999999999999999998999999999976655556788999999999999999999999643 55899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++.... +++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 94 lv~e~~~~~~L~~~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~ 163 (297)
T 3fxz_A 94 VVMEYLAGGSLTDVVTETC-------MDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFC 163 (297)
T ss_dssp EEEECCTTCBHHHHHHHSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEECCCCCCHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCc
Confidence 9999999999999998753 78899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 164 ~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~pf~~~~--- 220 (297)
T 3fxz_A 164 AQITPE--------QSKRSTMVGTPYWMAPEVVT------------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNEN--- 220 (297)
T ss_dssp EECCST--------TCCBCCCCSCGGGCCHHHHH------------CSCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---
T ss_pred eecCCc--------ccccCCccCCcCccChhhhc------------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC---
Confidence 765221 11233457999999997664 4678999999999999999999999996421
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... .... ....+.. ..+..++..+.+++.+||..||++|||+.|+++
T Consensus 221 -~~~~~-~~~~-----~~~~~~~----------~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 221 -PLRAL-YLIA-----TNGTPEL----------QNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp -HHHHH-HHHH-----HHCSCCC----------SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -HHHHH-HHHH-----hCCCCCC----------CCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 11111 1100 0000000 011123456789999999999999999999975
No 56
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.3e-40 Score=384.83 Aligned_cols=348 Identities=21% Similarity=0.214 Sum_probs=292.4
Q ss_pred ceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccC
Q 001908 221 ENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGI 300 (997)
Q Consensus 221 ~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 300 (997)
+.++.++++++ .+|..+. +++++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~ 89 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP---TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRS 89 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-cCCCCCC---CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCC
Confidence 45666777776 6776654 5678888888888877788888888888888888888888788888888888888877
Q ss_pred ccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCC
Q 001908 301 NNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFN 380 (997)
Q Consensus 301 N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N 380 (997)
|+++.++.. .+.++++|++|+|++|++ ++..|..|.++++|+.|+|++|
T Consensus 90 n~l~~~~~~------~~~~l~~L~~L~Ls~n~i-------------------------~~~~~~~~~~l~~L~~L~l~~n 138 (477)
T 2id5_A 90 NRLKLIPLG------VFTGLSNLTKLDISENKI-------------------------VILLDYMFQDLYNLKSLEVGDN 138 (477)
T ss_dssp SCCCSCCTT------SSTTCTTCCEEECTTSCC-------------------------CEECTTTTTTCTTCCEEEECCT
T ss_pred CcCCccCcc------cccCCCCCCEEECCCCcc-------------------------ccCChhHccccccCCEEECCCC
Confidence 777765432 234555555555555544 4456667888899999999999
Q ss_pred CCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc
Q 001908 381 QLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ 460 (997)
Q Consensus 381 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 460 (997)
++++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|++|++.+..+..|..+++|++|++++|.+.+.+|.
T Consensus 139 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 218 (477)
T 2id5_A 139 DLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTP 218 (477)
T ss_dssp TCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECT
T ss_pred ccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCc
Confidence 99988888999999999999999999987778899999999999999999988888999999999999999998888888
Q ss_pred ccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCc
Q 001908 461 QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKS 540 (997)
Q Consensus 461 ~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 540 (997)
......++ +.|+|++|++++..+..|..+++|+.|+|++|++++..+..|.++++|+.|+|++|++++..|..|..+++
T Consensus 219 ~~~~~~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 297 (477)
T 2id5_A 219 NCLYGLNL-TSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNY 297 (477)
T ss_dssp TTTTTCCC-SEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTT
T ss_pred ccccCccc-cEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCccc
Confidence 88877777 89999999999666678999999999999999999888889999999999999999999999999999999
Q ss_pred CCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCCCC
Q 001908 541 IKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGGSN 604 (997)
Q Consensus 541 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~~~ 604 (997)
|+.|+|++|+|++..+..|..+++|++|+|++|+|++.++..+.+.......+.++...|.++.
T Consensus 298 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 298 LRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLLWVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp CCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGHHHHTTTTSSCCTTCCCBEEESG
T ss_pred CCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchHhHHhhhhccccCccCceeCCch
Confidence 9999999999998888889999999999999999998877555445555677888999997543
No 57
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.6e-40 Score=365.41 Aligned_cols=287 Identities=35% Similarity=0.579 Sum_probs=225.7
Q ss_pred CCccChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEee
Q 001908 666 FPMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITV 744 (997)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~ 744 (997)
...++..++....++|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|++++++++||||++++++
T Consensus 17 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 17 LKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred cceecHHHHHHHhhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 455788899999999999999999999999999865 68999999997433 2223468899999999999999999999
Q ss_pred eeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 745 CSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 745 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
+. .....++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+++.++|+||||||+||+++
T Consensus 96 ~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~ 168 (326)
T 3uim_A 96 CM-----TPTERLLVYPYMANGSVASCLRERPES--QPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD 168 (326)
T ss_dssp EC-----CSSCCEEEEECCTTCBHHHHHHCCSTT--CCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC
T ss_pred Ee-----cCCceEEEEEeccCCCHHHHHHhcccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC
Confidence 64 455789999999999999999876522 23589999999999999999999998777899999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.++.+||+|||+|+..... .........||+.|+|||.+. +..++.++|||||||++|||+
T Consensus 169 ~~~~~kl~Dfg~~~~~~~~-------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~ 229 (326)
T 3uim_A 169 EEFEAVVGDFGLAKLMDYK-------DTHVTTAVRGTIGHIAPEYLS------------TGKSSEKTDVFGYGVMLLELI 229 (326)
T ss_dssp TTCCEEECCCSSCEECCSS-------SSCEECCCCSCGGGCCHHHHH------------HSEECHHHHHHHHHHHHHHHH
T ss_pred CCCCEEeccCccccccCcc-------cccccccccCCcCccCHHHhc------------cCCCCccccchhHHHHHHHHH
Confidence 9999999999999865221 112233456999999997764 356789999999999999999
Q ss_pred hCCCCCCcC---cCCCccHHHHHHhhcch-hhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 905 TRRRPTNCM---FQGGLTLHEFCKMALPE-KVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 905 tg~~P~~~~---~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
+|+.||... ........++....... ......+..... ....+++..+.+++.+||+.||++|||++|
T Consensus 230 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 301 (326)
T 3uim_A 230 TGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG--------NYKDEEVEQLIQVALLCTQSSPMERPKMSE 301 (326)
T ss_dssp HCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT--------SCCHHHHHHHHHHHHHHTCSCGGGSCCHHH
T ss_pred hCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhcc--------ccCHHHHHHHHHHHHHHhCcCCccCCCHHH
Confidence 999999632 12233344444333222 222222322221 223456788999999999999999999999
Q ss_pred HHHHHHH
Q 001908 981 VLAKLCA 987 (997)
Q Consensus 981 vl~~L~~ 987 (997)
+++.|++
T Consensus 302 ll~~L~~ 308 (326)
T 3uim_A 302 VVRMLEG 308 (326)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9999985
No 58
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=3.4e-39 Score=355.72 Aligned_cols=274 Identities=22% Similarity=0.358 Sum_probs=207.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhh--cCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|++ +++.||||++.... ...+.+|.+++.. ++||||+++++++... ......
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~-~~~~~~ 80 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTS-RHSSTQ 80 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE-ETTEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccc-cCCCce
Confidence 46899999999999999999998 68999999986432 3556677777766 7999999999987543 234567
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcEecCCCCCCeeeCCCC
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH--------HHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
.++||||+++|+|.++++.. .+++..+++++.|++.||+||| +. +|+||||||+||+++.++
T Consensus 81 ~~lv~e~~~~g~L~~~l~~~-------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~ 150 (301)
T 3q4u_A 81 LWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNG 150 (301)
T ss_dssp EEEEECCCTTCBHHHHHTTC-------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTS
T ss_pred eEEehhhccCCCHHHHHhhc-------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCC
Confidence 89999999999999999654 3889999999999999999999 77 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR- 906 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg- 906 (997)
.+||+|||+|+....... ..........||+.|+|||++..... .....++.++|||||||++|||+||
T Consensus 151 ~~kl~Dfg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~DvwslG~il~el~tg~ 220 (301)
T 3q4u_A 151 QCCIADLGLAVMHSQSTN----QLDVGNNPRVGTKRYMAPEVLDETIQ------VDCFDSYKRVDIWAFGLVLWEVARRM 220 (301)
T ss_dssp CEEECCCTTCEEEETTTT----EEECCCCCCCCCGGGCCHHHHTTCCC------TTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred CEEEeeCCCeeecccccc----cccccccccccccceeChhhhcCcCC------CCcccCCchhhHHHHHHHHHHHHhhh
Confidence 999999999976532211 11111233579999999988763110 0001456799999999999999999
Q ss_pred ---------CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 907 ---------RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 907 ---------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
+.||..................... ..+.... ......++.++.+++.+||+.||++|||
T Consensus 221 ~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps 289 (301)
T 3q4u_A 221 VSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQ----QRPNIPN-------RWFSDPTLTSLAKLMKECWYQNPSARLT 289 (301)
T ss_dssp CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-------GGGGSHHHHHHHHHHHHHCCSSGGGSCC
T ss_pred cCccccccccccccccCCCCcchhhhhHHHhccC----CCCCCCh-------hhccCccHHHHHHHHHHHhhcChhhCCC
Confidence 8888765444444433322211111 1111110 1122346778999999999999999999
Q ss_pred HHHHHHHHHHH
Q 001908 978 MRDVLAKLCAA 988 (997)
Q Consensus 978 ~~evl~~L~~~ 988 (997)
+.|+++.|+++
T Consensus 290 ~~~i~~~L~~i 300 (301)
T 3q4u_A 290 ALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHhcc
Confidence 99999999876
No 59
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.5e-39 Score=358.17 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=201.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..+|++.+.||+|+||.||+|++..+|+.||||++... .....+.+.+|+++++.++||||+++++++ ...+.
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~-----~~~~~ 88 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI-----ETEKT 88 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EECCE
Confidence 45799999999999999999999989999999999643 344567789999999999999999999995 44568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~------~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 89 LYLIMEYASGGEVFDYLVAHG------RMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp EEEEECCCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred EEEEEECCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeecc
Confidence 999999999999999998764 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|+.... .......+||+.|+|||++. +..+ +.++||||+||++|||++|+.||...
T Consensus 160 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwslG~il~ell~g~~pf~~~- 217 (328)
T 3fe3_A 160 FSNEFTV---------GGKLDAFCGAPPYAAPELFQ------------GKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ- 217 (328)
T ss_dssp CCGGGSS---------SCGGGTTSSSGGGCCHHHHH------------TCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred CceecCC---------CCccccccCCcceeCccccc------------CCCcCCchhhhhhhHHHHHHHHhCCCCCCCC-
Confidence 9976521 12234567999999998765 3444 57999999999999999999999743
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+.......... .. +.....++.+++.+||..||++|||+.|+++
T Consensus 218 ----~~~~~~~~i~~~~~------~~------------p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 218 ----NLKELRERVLRGKY------RI------------PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ----SHHHHHHHHHHCCC------CC------------CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ----CHHHHHHHHHhCCC------CC------------CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 22222221111100 00 0112345779999999999999999999975
No 60
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=7.1e-40 Score=364.99 Aligned_cols=263 Identities=27% Similarity=0.416 Sum_probs=206.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCc---EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||+||+|++..+++ .||||+++.. .....+.+.+|++++++++||||+++++++. ..
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 122 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVT-----RG 122 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----GG
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----eC
Confidence 3578889999999999999999975444 5999999753 4445678999999999999999999999954 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.++++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 123 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~D 194 (325)
T 3kul_A 123 RLAMIVTEYMENGSLDTFLRTHDG-----QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194 (325)
T ss_dssp GCCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CccEEEeeCCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECC
Confidence 678999999999999999976532 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+++....... .........+|+.|+|||++. +..++.++|||||||++|||++ |+.||..
T Consensus 195 fg~a~~~~~~~~-----~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell~~g~~p~~~ 257 (325)
T 3kul_A 195 FGLSRVLEDDPD-----AAYTTTGGKIPIRWTAPEAIA------------FRTFSSASDVWSFGVVMWEVLAYGERPYWN 257 (325)
T ss_dssp CSSCEECC---------CCEECC---CCGGGSCHHHHH------------HCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCcccccccCcc-----ceeeccCCCCcccccCHhHhc------------CCCCCcHHHHHHHHHHHHHHHcCCCCCccc
Confidence 999987632211 111223345688899997765 3568899999999999999999 9999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.. ..+...... ..... +.+..++..+.+++..||..||++|||+.|+++.|+++....
T Consensus 258 ~~-----~~~~~~~~~-----~~~~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 258 MT-----NRDVISSVE-----EGYRL------------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp SC-----HHHHHHHHH-----TTCCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred CC-----HHHHHHHHH-----cCCCC------------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 31 111111110 00000 111234567889999999999999999999999999987654
No 61
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.1e-39 Score=367.53 Aligned_cols=266 Identities=23% Similarity=0.369 Sum_probs=209.0
Q ss_pred hhcCccCCcccccCcceEEEEEEC-------CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG-------ENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
.++|++.+.||+|+||.||+|++. .++..||||+++.. .....+.+.+|+++++++ +||||++++++|.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 157 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT-- 157 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEEC--
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEc--
Confidence 468999999999999999999874 34568999999744 344567899999999999 8999999999954
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
..+..++||||+++|+|.+++...... .....+++..++.++.||+.||+|||++ +|+||||||
T Consensus 158 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp 231 (370)
T 2psq_A 158 ---QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAA 231 (370)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCG
T ss_pred ---cCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccch
Confidence 455799999999999999999876421 1123478999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++. +..++.++|||||||
T Consensus 232 ~NIll~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DvwslG~ 293 (370)
T 2psq_A 232 RNVLVTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALF------------DRVYTHQSDVWSFGV 293 (370)
T ss_dssp GGEEECTTCCEEECCCSSCEETTCCCT------TCTTTTTTSCGGGCCHHHHH------------TCCCCHHHHHHHHHH
T ss_pred hhEEECCCCCEEEccccCCcccCcccc------eecccCCCcccceECHhHhc------------CCCCCcHHHHHHHHH
Confidence 999999999999999999986532211 11223345788999997664 467899999999999
Q ss_pred HHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 899 MLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 899 vl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++|||+| |+.||...... .+...... ...+ ..+..++.++.+++.+||..||++||+
T Consensus 294 il~ellt~g~~p~~~~~~~--~~~~~~~~--------~~~~------------~~~~~~~~~l~~li~~~l~~dP~~Rpt 351 (370)
T 2psq_A 294 LMWEIFTLGGSPYPGIPVE--ELFKLLKE--------GHRM------------DKPANCTNELYMMMRDCWHAVPSQRPT 351 (370)
T ss_dssp HHHHHHTTSCCSSTTCCGG--GHHHHHHT--------TCCC------------CCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHcCCCCCCCCCCHH--HHHHHHhc--------CCCC------------CCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 9999999 99998743211 11111110 0000 111234567889999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q 001908 978 MRDVLAKLCAARQT 991 (997)
Q Consensus 978 ~~evl~~L~~~~~~ 991 (997)
+.|+++.|+++...
T Consensus 352 ~~ell~~L~~il~~ 365 (370)
T 2psq_A 352 FKQLVEDLDRILTL 365 (370)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998764
No 62
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=5.6e-39 Score=354.89 Aligned_cols=263 Identities=27% Similarity=0.394 Sum_probs=199.3
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
...++|++.+.||+|+||+||+|++ +++.||||++... .....+.+.+|++++++++||||+++++++ ...
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~ 106 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV-----TQP 106 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CST
T ss_pred CChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE-----EEC
Confidence 3456899999999999999999988 6889999998643 344557889999999999999999999995 345
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeCCCCcEEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~~~~~~kl 831 (997)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL 180 (309)
T 3p86_A 107 PNLSIVTEYLSRGSLYRLLHKSGA---REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKV 180 (309)
T ss_dssp TCCEEEEECCTTCBHHHHHHSTTH---HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEE
T ss_pred CceEEEEecCCCCcHHHHHhhcCC---CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEE
Confidence 578999999999999999987541 11378899999999999999999999 7 999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+..... ........||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 181 ~Dfg~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 181 CDFGLSRLKAST--------FLSSKSAAGTPEWMAPEVLR------------DEPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp CCCC-------------------------CCTTSCHHHHT------------TCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred CCCCCCcccccc--------ccccccCCCCccccChhhhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 999999754211 11223457999999997664 4668899999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
... ..+...... ....... .+..++.++.+++.+||..||++|||+.|+++.|+++.+.
T Consensus 241 ~~~-----~~~~~~~~~----~~~~~~~------------~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 241 NLN-----PAQVVAAVG----FKCKRLE------------IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp TSC-----HHHHHHHHH----HSCCCCC------------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCC-----HHHHHHHHH----hcCCCCC------------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 431 111111100 0000000 1112345688999999999999999999999999988764
Q ss_pred h
Q 001908 992 L 992 (997)
Q Consensus 992 ~ 992 (997)
.
T Consensus 300 ~ 300 (309)
T 3p86_A 300 A 300 (309)
T ss_dssp -
T ss_pred C
Confidence 3
No 63
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.1e-38 Score=350.56 Aligned_cols=284 Identities=32% Similarity=0.462 Sum_probs=222.0
Q ss_pred cCCccChHHHHHHhhcCccC------CcccccCcceEEEEEECCCCcEEEEEEeccc----chhhHHHHHHHHHHHhhcC
Q 001908 665 YFPMVSYSELSEATNEFSSS------NMIGQGSFGSVYKGILGENGTFVAVKILNLM----QKGALKSFVAECEVLRNTR 734 (997)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~ 734 (997)
..+.+++.++..++++|... +.||+|+||+||+|+. +++.||||++... .....+.+.+|++++++++
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 88 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ 88 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC
Confidence 34667889999999998877 8999999999999987 6889999998642 2344678899999999999
Q ss_pred CCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEec
Q 001908 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHG 814 (997)
Q Consensus 735 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 814 (997)
||||+++++++. ..+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||++ +|+||
T Consensus 89 h~~i~~~~~~~~-----~~~~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~ 157 (307)
T 2nru_A 89 HENLVELLGFSS-----DGDDLCLVYVYMPNGSLLDRLSCLDG---TPPLSWHMRCKIAQGAANGINFLHEN---HHIHR 157 (307)
T ss_dssp CTTBCCEEEEEC-----SSSSCEEEEECCTTCBHHHHHHTGGG---CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCeEEEEEEEe-----cCCceEEEEEecCCCcHHHHHHhccC---CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecC
Confidence 999999999954 45578999999999999999985432 12488999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhH
Q 001908 815 DLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894 (997)
Q Consensus 815 Dlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dvw 894 (997)
||||+||+++.++.+||+|||.++...... .........||+.|+|||.+. +.++.++|||
T Consensus 158 dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~-------------~~~~~~~Dv~ 218 (307)
T 2nru_A 158 DIKSANILLDEAFTAKISDFGLARASEKFA------QTVMTSRIVGTTAYMAPEALR-------------GEITPKSDIY 218 (307)
T ss_dssp CCCGGGEEECTTCCEEECCCTTCEECCSCS------SCEECSSCCSCGGGCCHHHHT-------------TEECTHHHHH
T ss_pred CCCHHHEEEcCCCcEEEeeccccccccccc------ccccccccCCCcCcCChHHhc-------------CCCCccchhH
Confidence 999999999999999999999997652211 111223357899999998764 3478899999
Q ss_pred HHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhh--cchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCC
Q 001908 895 SLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMA--LPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESP 972 (997)
Q Consensus 895 SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 972 (997)
||||++|||++|+.||........ ...+.... ........+++.+. .....++..+.+++.+||+.||
T Consensus 219 slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~li~~cl~~~p 288 (307)
T 2nru_A 219 SFGVVLLEIITGLPAVDEHREPQL-LLDIKEEIEDEEKTIEDYIDKKMN---------DADSTSVEAMYSVASQCLHEKK 288 (307)
T ss_dssp HHHHHHHHHHHCCCSBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCSSCS---------CCCHHHHHHHHHHHHHHTCSST
T ss_pred HHHHHHHHHHHCCCCcccCcchHH-HHHHHHHhhhhhhhhhhhcccccc---------ccchHHHHHHHHHHHHHcCCCc
Confidence 999999999999999986543321 22221111 11122233333221 1233567789999999999999
Q ss_pred CCCCCHHHHHHHHHHHHH
Q 001908 973 IERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 973 ~~Rps~~evl~~L~~~~~ 990 (997)
++|||+.++++.|+++..
T Consensus 289 ~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 289 NKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp TTSCCHHHHHHHHHHHC-
T ss_pred ccCcCHHHHHHHHHHHhc
Confidence 999999999999998753
No 64
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8.7e-39 Score=355.53 Aligned_cols=262 Identities=23% Similarity=0.313 Sum_probs=209.1
Q ss_pred CccChHHHHHHhhc----------CccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCC
Q 001908 667 PMVSYSELSEATNE----------FSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHR 736 (997)
Q Consensus 667 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ 736 (997)
+.++.++++.+++. |+..++||+|+||.||+|+.+.+|+.||||+++.......+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677777777754 67778999999999999999989999999999866666667889999999999999
Q ss_pred CcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCC
Q 001908 737 NLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDL 816 (997)
Q Consensus 737 niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDl 816 (997)
||+++++++.. .+..++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||
T Consensus 103 niv~~~~~~~~-----~~~~~lv~e~~~~~~L~~~l~~~-------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dl 167 (321)
T 2c30_A 103 NVVEMYKSYLV-----GEELWVLMEFLQGGALTDIVSQV-------RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDI 167 (321)
T ss_dssp TBCCEEEEEEE-----TTEEEEEECCCCSCBHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred CcceEEEEEEE-----CCEEEEEEecCCCCCHHHHHHhc-------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCC
Confidence 99999999654 45899999999999999998754 388999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 817 KPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 817 k~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
||+||+++.++.+||+|||+++..... ........||+.|+|||++. +..++.++|||||
T Consensus 168 kp~NIll~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Dv~sl 227 (321)
T 2c30_A 168 KSDSILLTLDGRVKLSDFGFCAQISKD--------VPKRKSLVGTPYWMAPEVIS------------RSLYATEVDIWSL 227 (321)
T ss_dssp SGGGEEECTTCCEEECCCTTCEECCSS--------SCCBCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHH
T ss_pred CHHHEEECCCCcEEEeeeeeeeecccC--------ccccccccCCccccCHhhhc------------CCCCCchhhHHHH
Confidence 999999999999999999999765221 11223457999999997654 4678899999999
Q ss_pred HHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 897 GVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 897 Gvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
||++|||++|+.||.... ..+.... ......+.... ....+..+.+++.+||..||++||
T Consensus 228 G~il~el~~g~~pf~~~~-----~~~~~~~-----~~~~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rp 287 (321)
T 2c30_A 228 GIMVIEMVDGEPPYFSDS-----PVQAMKR-----LRDSPPPKLKN----------SHKVSPVLRDFLERMLVRDPQERA 287 (321)
T ss_dssp HHHHHHHHHSSCTTTTSC-----HHHHHHH-----HHHSSCCCCTT----------GGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHHHHHHHhCCCCCCCCC-----HHHHHHH-----HhcCCCCCcCc----------cccCCHHHHHHHHHHccCChhhCc
Confidence 999999999999987421 1111111 11111111110 112245678999999999999999
Q ss_pred CHHHHHH
Q 001908 977 EMRDVLA 983 (997)
Q Consensus 977 s~~evl~ 983 (997)
|+.|+++
T Consensus 288 s~~ell~ 294 (321)
T 2c30_A 288 TAQELLD 294 (321)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999976
No 65
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=354.06 Aligned_cols=288 Identities=21% Similarity=0.300 Sum_probs=214.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~~ 85 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHKV 85 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec---CCCceEE
Confidence 57999999999999999999999899999999997433 3345778899999999999999999998653 2345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee----CCCCcEEEcc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVSD 833 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~D 833 (997)
+||||+++|+|.+++...... ..+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 86 lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~D 159 (319)
T 4euu_A 86 LIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTD 159 (319)
T ss_dssp EEEECCTTCBHHHHHHSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECC
T ss_pred EEEeCCCCCCHHHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEcc
Confidence 999999999999999875421 2388999999999999999999999 99999999999999 8888999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+..... .......||+.|+|||++..... ....+..++.++|||||||++|||+||+.||...
T Consensus 160 fg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 226 (319)
T 4euu_A 160 FGAARELEDD---------EQFVSLYGTEEYLHPDMYERAVL----RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF 226 (319)
T ss_dssp CTTCEECCTT---------CCBCCCCSCGGGCCHHHHHHHTS----CCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred CCCceecCCC---------CceeecccCCCccCHHHhhhccc----cccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 9999865221 12233569999999998763211 1112467889999999999999999999999754
Q ss_pred cCCCccHHHHHHh--hcchhhhhhcCccc--cccccc--chhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKM--ALPEKVMETVDPSL--LLAWSD--GRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 914 ~~~~~~~~~~~~~--~~~~~~~~~~d~~~--~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
............. ..+......+.... ...+.. .............+.+++.+||..||++|||++|+++...+
T Consensus 227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d 306 (319)
T 4euu_A 227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306 (319)
T ss_dssp TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHH
Confidence 3322222221111 11111000000000 000000 00112235667788999999999999999999999998875
Q ss_pred H
Q 001908 988 A 988 (997)
Q Consensus 988 ~ 988 (997)
.
T Consensus 307 ~ 307 (319)
T 4euu_A 307 I 307 (319)
T ss_dssp H
T ss_pred H
Confidence 4
No 66
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=4.9e-40 Score=374.15 Aligned_cols=262 Identities=26% Similarity=0.394 Sum_probs=208.1
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..++|.+.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++||||++++++|. ..+.
T Consensus 112 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 186 (377)
T 3cbl_A 112 NHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCT-----QKQP 186 (377)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEEC-----SSSS
T ss_pred chHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe-----cCCC
Confidence 346889999999999999999999989999999998743 2334567889999999999999999999964 3457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 187 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 187 IYIVMELVQGGDFLTFLRTEG-----ARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp CEEEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred cEEEEEcCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCC
Confidence 899999999999999998653 1378999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~ 914 (997)
+|+...... .........+++.|+|||++. ++.++.++|||||||++|||+| |..||....
T Consensus 259 ~s~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwslG~il~el~t~g~~p~~~~~ 320 (377)
T 3cbl_A 259 MSREEADGV------YAASGGLRQVPVKWTAPEALN------------YGRYSSESDVWSFGILLWETFSLGASPYPNLS 320 (377)
T ss_dssp GCEECTTSE------EECCSSCCEEEGGGSCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSC
T ss_pred CceecCCCc------eeecCCCCCCCcCcCCHhHhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 997542111 011112234577899998765 3568899999999999999999 999987432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.. ...+.+... .+.+.+..++.++.+++.+||+.||++|||+.++++.|+++.+.
T Consensus 321 ~~--~~~~~~~~~--------------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 321 NQ--QTREFVEKG--------------------GRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp HH--HHHHHHHTT--------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HH--HHHHHHHcC--------------------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 10 111111000 00111223466788999999999999999999999999998764
No 67
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=9.9e-39 Score=352.72 Aligned_cols=266 Identities=29% Similarity=0.427 Sum_probs=203.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.++||+|+||+||+|++.. .+|+|+++.. .....+.+.+|++++++++||||+++++++. .+.
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~~ 105 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT------KDN 105 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSS
T ss_pred ccceEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc------cCc
Confidence 4688999999999999999998753 5899988743 3445678899999999999999999999853 345
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++..... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 106 ~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 106 LAIVTQWCEGSSLYKHLHVQET-----KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CEEEEECCSSCBHHHHHHTSCC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred EEEEEecCCCCcHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 7999999999999999976542 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+..... ..........||+.|+|||++.. ..+..++.++|||||||++|||++|+.||.....
T Consensus 178 ~a~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~ 242 (307)
T 3lb7_A 178 LATVKSRW------SGSQQVEQPTGSVLWMAPEVIRM---------QDNNPFSFQSDVYSYGIVLYELMTGELPYSHINN 242 (307)
T ss_dssp SSCC------------------CCCCTTSCCHHHHHC---------CSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCC
T ss_pred Cceecccc------cccccccCCCCCcceECcceeec---------cCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCc
Confidence 99754211 11122234579999999987742 1245688999999999999999999999974322
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
. ........ .....+.... ....++.++.+++.+||+.+|++||++.|+++.|+.+...+
T Consensus 243 ~----~~~~~~~~----~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 243 R----DQIIFMVG----RGYASPDLSK---------LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp H----HHHHHHHH----HTCCCCCSTT---------SCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred H----HHHHHHHh----cCCCCcchhh---------hhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 1 11111100 0011111110 01124567889999999999999999999999999988765
No 68
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=8.6e-38 Score=366.46 Aligned_cols=169 Identities=28% Similarity=0.415 Sum_probs=83.3
Q ss_pred CCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEec
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNL 449 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (997)
++|+.|++++|++++. ..+..+++|++|++++|++++..| +..+++|+.|++++|++++..+ +..+++|++|++
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEc
Confidence 3444444444444322 233444444444444444443322 4444444444444444443222 444444555555
Q ss_pred CCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccc
Q 001908 450 SDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529 (997)
Q Consensus 450 ~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (997)
++|++.+..| +..++++ +.|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|++++
T Consensus 295 ~~n~l~~~~~--~~~l~~L-~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~ 367 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNL-TYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISD 367 (466)
T ss_dssp CSSCCSCCGG--GGGCTTC-SEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCB
T ss_pred CCCcccCchh--hcCCCCC-CEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCc
Confidence 5554443222 3444444 455555555554433 44555666666666666543 245556666666666666665
Q ss_pred cCChhccccCcCCeeeCccccccc
Q 001908 530 SIPLSLRSLKSIKELDLSCNNLSG 553 (997)
Q Consensus 530 ~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (997)
.+| +..+++|+.|++++|++++
T Consensus 368 ~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 368 LTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CGG--GTTCTTCCEEECCCEEEEC
T ss_pred cch--hhcCCCCCEEeccCCcccC
Confidence 554 5556666666666666654
No 69
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-39 Score=357.75 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=194.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..++|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+.
T Consensus 8 l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~-----~~~~ 82 (347)
T 3zgw_A 8 LLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLE-----TANK 82 (347)
T ss_dssp TTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred HhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEE-----eCCE
Confidence 4578999999999999999999999999999999986432 233457889999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.... .+++..++.++.||+.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 83 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 83 IFMVLEYCPGGELFDYIISQD------RLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp EEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 999999999999999998754 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|...... ........+||+.|+|||++. +.. ++.++||||+||++|||++|..||...
T Consensus 154 ~a~~~~~~-------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~- 213 (347)
T 3zgw_A 154 LCAKPKGN-------KDYHLQTCCGSLAYAAPELIQ------------GKSYLGSEADVWSMGILLYVLMCGFLPFDDD- 213 (347)
T ss_dssp TCBC---------------------CGGGCCHHHHT------------TC---CCHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred CcccccCC-------CCccccccCCccCccCHHHHc------------CCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC-
Confidence 98754221 112233457999999997764 344 488999999999999999999999742
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+......... ... +....+++.+++.+||..||++|||+.|+++.
T Consensus 214 ----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 214 ----NVMALYKKIMRGK------YDV------------PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----SHHHHHHHHHHTC------CCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CHHHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 2222211111100 000 01123456789999999999999999999863
No 70
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.1e-37 Score=365.60 Aligned_cols=327 Identities=29% Similarity=0.387 Sum_probs=252.5
Q ss_pred ccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCcc
Q 001908 214 LYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNL 293 (997)
Q Consensus 214 l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 293 (997)
+..+++|++|+|++|.++ .+|. +..+++|++|++++|.+++..| ++++++|++|+|++|++++..+ |+.+++|
T Consensus 64 ~~~l~~L~~L~Ls~n~l~-~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 136 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLT-DITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNL 136 (466)
T ss_dssp GGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTC
T ss_pred hhhhcCCCEEECCCCccC-Cchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCC
Confidence 555666677777777666 3343 3466677777777777765544 6777777777777777766544 6677777
Q ss_pred CeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCC
Q 001908 294 WSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLN 373 (997)
Q Consensus 294 ~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 373 (997)
++|++++|+++.++ .+..+++|++|+++ |.+.+..+ +.++ ++|+.|++++|.+++. ..+..+++|+
T Consensus 137 ~~L~l~~n~l~~~~--------~~~~l~~L~~L~l~-~~~~~~~~--~~~l-~~L~~L~l~~n~l~~~--~~l~~l~~L~ 202 (466)
T 1o6v_A 137 NRLELSSNTISDIS--------ALSGLTSLQQLSFG-NQVTDLKP--LANL-TTLERLDISSNKVSDI--SVLAKLTNLE 202 (466)
T ss_dssp SEEEEEEEEECCCG--------GGTTCTTCSEEEEE-ESCCCCGG--GTTC-TTCCEEECCSSCCCCC--GGGGGCTTCS
T ss_pred CEEECCCCccCCCh--------hhccCCcccEeecC-CcccCchh--hccC-CCCCEEECcCCcCCCC--hhhccCCCCC
Confidence 77777777766531 35667777777775 44443332 4444 5677777777777643 2478889999
Q ss_pred EEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCc
Q 001908 374 LLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNK 453 (997)
Q Consensus 374 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 453 (997)
+|++++|++++..| ++.+++|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|++|++++|+
T Consensus 203 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~ 276 (466)
T 1o6v_A 203 SLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQ 276 (466)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSC
T ss_pred EEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCc
Confidence 99999999997766 77899999999999999853 468889999999999999997655 8889999999999999
Q ss_pred ccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCCh
Q 001908 454 LIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPL 533 (997)
Q Consensus 454 l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 533 (997)
+++..| +..++++ +.|++++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|++++. .
T Consensus 277 l~~~~~--~~~l~~L-~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 347 (466)
T 1o6v_A 277 ISNISP--LAGLTAL-TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 347 (466)
T ss_dssp CCCCGG--GTTCTTC-SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred cCcccc--ccCCCcc-CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--h
Confidence 985544 7778888 899999999997554 7889999999999999997766 78899999999999999865 4
Q ss_pred hccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 534 SLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
.+..+++|+.|++++|++++.+| +..+++|+.|++++|++++.
T Consensus 348 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 348 SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEECC
T ss_pred hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccCC
Confidence 78899999999999999998877 88999999999999999974
No 71
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.2e-39 Score=365.56 Aligned_cols=278 Identities=20% Similarity=0.312 Sum_probs=215.5
Q ss_pred cChHHHHHHhhcCccCCcccccCcceEEEEE-----ECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceE
Q 001908 669 VSYSELSEATNEFSSSNMIGQGSFGSVYKGI-----LGENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKI 741 (997)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l 741 (997)
....+++...++|++.+.||+|+||.||+|+ ...+++.||||+++.. .....+.+.+|+++++++ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 4556666778899999999999999999998 4456789999999753 334457889999999999 79999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCC------------------------------------------
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQP------------------------------------------ 779 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------------------------------ 779 (997)
+++|.. .....++||||+++|+|.++++......
T Consensus 92 ~~~~~~----~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (359)
T 3vhe_A 92 LGACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGF 167 (359)
T ss_dssp EEEECS----TTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------
T ss_pred eeeeec----CCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccc
Confidence 999743 2345899999999999999998764210
Q ss_pred ------------------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcc
Q 001908 780 ------------------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLF 841 (997)
Q Consensus 780 ------------------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~ 841 (997)
....+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~ 244 (359)
T 3vhe_A 168 VEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 244 (359)
T ss_dssp ----------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTT
T ss_pred ccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeec
Confidence 011278899999999999999999999 99999999999999999999999999998652
Q ss_pred cCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccH
Q 001908 842 ARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTL 920 (997)
Q Consensus 842 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~ 920 (997)
... .........||+.|+|||++. +..++.++|||||||++|||+| |+.||....... .+
T Consensus 245 ~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~-~~ 305 (359)
T 3vhe_A 245 KDP------DYVRKGDARLPLKWMAPETIF------------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE-EF 305 (359)
T ss_dssp SCT------TCEEC--CEECGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-HH
T ss_pred ccc------cchhccccCCCceeEChhhhc------------CCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH-HH
Confidence 211 112233456899999997765 4668899999999999999998 999987432221 11
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
...... ...... +..+++++.+++.+||+.||++|||+.|+++.|+++.++.
T Consensus 306 ~~~~~~--------~~~~~~------------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 357 (359)
T 3vhe_A 306 CRRLKE--------GTRMRA------------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 357 (359)
T ss_dssp HHHHHH--------TCCCCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHc--------CCCCCC------------CCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHHh
Confidence 111110 000000 1112456789999999999999999999999999998754
No 72
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=358.95 Aligned_cols=253 Identities=22% Similarity=0.335 Sum_probs=201.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|+.+.+++.||+|++... .....+.+.+|+++++.++||||+++++++ ...+
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~-----~~~~ 88 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF-----QDEE 88 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeCC
Confidence 36799999999999999999999999999999999633 233457889999999999999999999985 4556
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DF 159 (384)
T 4fr4_A 89 DMFMVVDLLLGGDLRYHLQQNV------HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDF 159 (384)
T ss_dssp EEEEEECCCTTEEHHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEecc
Confidence 8999999999999999998754 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... .......+||+.|+|||++.. ..+..++.++||||+||++|||++|+.||....
T Consensus 160 G~a~~~~~---------~~~~~~~~gt~~Y~aPE~~~~---------~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~ 221 (384)
T 4fr4_A 160 NIAAMLPR---------ETQITTMAGTKPYMAPEMFSS---------RKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRS 221 (384)
T ss_dssp TTCEECCT---------TCCBCCCCSCGGGCCGGGTCC---------CSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCT
T ss_pred ceeeeccC---------CCceeccCCCccccCCeeecc---------CCCCCCCccceeechHHHHHHHHhCCCCCCCCC
Confidence 99986522 122344679999999987642 123568899999999999999999999997432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-HHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-MRDVL 982 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-~~evl 982 (997)
.. ...+....... ..... +..+...+.+++.+||..||++||+ ++++.
T Consensus 222 ~~--~~~~~~~~~~~------~~~~~------------p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 222 ST--SSKEIVHTFET------TVVTY------------PSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp TS--CHHHHHHHHHH------CCCCC------------CTTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred Cc--cHHHHHHHHhh------cccCC------------CCcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 22 22222111100 00000 1122456789999999999999998 66654
No 73
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=3.1e-39 Score=366.44 Aligned_cols=261 Identities=26% Similarity=0.440 Sum_probs=195.9
Q ss_pred hcCccCCcccccCcceEEEEEEC---CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||+||+|+++ .++..||||+++.. .....+.+.+|++++++++||||+++++++. ..+
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~ 119 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVT-----KSK 119 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-----SSS
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----eCC
Confidence 57999999999999999999886 46778999999743 3445678999999999999999999999964 345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.++++.... .+++.+++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 120 ~~~lv~e~~~~~sL~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 191 (373)
T 2qol_A 120 PVMIVTEYMENGSLDSFLRKHDA-----QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191 (373)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred ceEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcC
Confidence 78999999999999999986532 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|+++....... .........+|+.|+|||.+. +..++.++|||||||++|||++ |+.||...
T Consensus 192 g~a~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~ 254 (373)
T 2qol_A 192 GLGRVLEDDPE-----AAYTTRGGKIPIRWTSPEAIA------------YRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254 (373)
T ss_dssp ---------------------------CTTSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTC-CTTTTC
T ss_pred ccccccccCCc-----cceeccCCCcCCCccChhhhc------------cCCcCchhcHHHHHHHHHHHHhCCCCCCCCC
Confidence 99987632111 111112234577899997664 4678999999999999999998 99998643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
. ..+..... +.... .+.+..++.++.+++.+||+.||++||++.|+++.|+++.+.
T Consensus 255 ~-----~~~~~~~i---------~~~~~--------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~ 310 (373)
T 2qol_A 255 S-----NQDVIKAV---------DEGYR--------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310 (373)
T ss_dssp C-----HHHHHHHH---------HTTEE--------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred C-----HHHHHHHH---------HcCCC--------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhC
Confidence 1 11111111 00000 001123456788999999999999999999999999998764
No 74
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=8.4e-39 Score=356.96 Aligned_cols=249 Identities=25% Similarity=0.362 Sum_probs=201.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||+||+|+.+.+++.||+|+++.. .......+.+|+++++.++||||+++++++ ...+
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~-----~~~~ 78 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF-----QTHD 78 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE-----ECSS
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE-----EeCC
Confidence 36899999999999999999999999999999999643 234457789999999999999999999985 4556
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 79 ~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DF 149 (337)
T 1o6l_A 79 RLCFVMEYANGGELFFHLSRER------VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDF 149 (337)
T ss_dssp EEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeec
Confidence 8999999999999999998754 478899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 150 G~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~Pf~~~- 208 (337)
T 1o6l_A 150 GLCKEGIS--------DGATMKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ- 208 (337)
T ss_dssp TTCBCSCC--------TTCCBCCCEECGGGCCGGGGS------------SSCBCTTHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred cchhhccc--------CCCcccccccChhhCChhhhc------------CCCCCchhhcccchhHHHHHhcCCCCCCCC-
Confidence 99975321 112233467999999996653 567899999999999999999999999742
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
...+......... ... +.....++.+++.+||..||++|| +++|+++
T Consensus 209 ----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 209 ----DHERLFELILMEE------IRF------------PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp ----SHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CHHHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 1222211111000 000 011245678999999999999999 8888865
No 75
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.3e-39 Score=348.11 Aligned_cols=258 Identities=27% Similarity=0.415 Sum_probs=205.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++. .....+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 81 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPIC 81 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSEE
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCceE
Confidence 367899999999999999999997 678899999975432 2367899999999999999999999954 455799
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 82 lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~ 153 (269)
T 4hcu_A 82 LVFEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 153 (269)
T ss_dssp EEEECCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEEeCCCCcHHHHHHhcCc-----ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccc
Confidence 99999999999999976542 478999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+.... ..........+|+.|+|||.+. +..++.++||||+||++|||++ |+.||....
T Consensus 154 ~~~~~-------~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~-- 212 (269)
T 4hcu_A 154 RFVLD-------DQYTSSTGTKFPVKWASPEVFS------------FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-- 212 (269)
T ss_dssp GGBCC-------HHHHSTTSTTCCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--
T ss_pred ccccc-------cccccccCcccccccCCHHHhc------------CCCCCchhhhHHHHHHHHHHhcCCCCCCCCCC--
Confidence 86522 1112223445788899997765 4568899999999999999999 999987431
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..+...... ....+.. +..++.++.+++.+||+.||++||+++|+++.|+++.++
T Consensus 213 ---~~~~~~~~~-----~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 213 ---NSEVVEDIS-----TGFRLYK------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp ---HHHHHHHHH-----TTCCCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHh-----cCccCCC------------CCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 112111110 0000000 011245678999999999999999999999999998764
No 76
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.5e-38 Score=349.20 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=203.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|++..+++.||+|++.. ......+.+.+|++++++++||||+++++++ ...+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~-----~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD-----EEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE-----ECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee-----eeCC
Confidence 3579999999999999999999999999999999853 2334457889999999999999999999995 4456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 155 (294)
T 4eqm_A 85 CYYLVMEYIEGPTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDF 155 (294)
T ss_dssp EEEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeC
Confidence 8999999999999999998764 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+...... ........||+.|+|||.+. +..++.++||||+||++|||+||+.||....
T Consensus 156 g~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 216 (294)
T 4eqm_A 156 GIAKALSETS-------LTQTNHVLGTVQYFSPEQAK------------GEATDECTDIYSIGIVLYEMLVGEPPFNGET 216 (294)
T ss_dssp SSSTTC--------------------CCSSCCHHHHH------------TCCCCTTHHHHHHHHHHHHHHHSSCSSCSSC
T ss_pred CCcccccccc-------ccccCccccCccccCHhHhc------------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9998652211 11223456999999997664 4667889999999999999999999997431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-EMRDVLAKLCAARQ 990 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~ 990 (997)
..+.......... +... ......++..+.+++.+||+.||++|| +++++.+.|.++..
T Consensus 217 -----~~~~~~~~~~~~~-----~~~~--------~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~ 275 (294)
T 4eqm_A 217 -----AVSIAIKHIQDSV-----PNVT--------TDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLH 275 (294)
T ss_dssp -----HHHHHHHHHSSCC-----CCHH--------HHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSS
T ss_pred -----hHHHHHHHhhccC-----CCcc--------hhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHh
Confidence 1111111110000 0000 001112356788999999999999999 99999999887543
No 77
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=3.5e-39 Score=365.48 Aligned_cols=266 Identities=24% Similarity=0.389 Sum_probs=207.0
Q ss_pred hcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
++|++.+.||+|+||+||+|++ ..+++.||||+++.. .......+.+|+.++++++||||+++++++. .
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~ 145 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL-----Q 145 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----S
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEe-----c
Confidence 5789999999999999999995 346778999999643 3445567899999999999999999999954 4
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCC-CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---c
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQP-EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---V 828 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~-~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~ 828 (997)
....++||||+++|+|.+++....... ....+++..++.++.||+.||+|||++ +|+||||||+||+++.++ .
T Consensus 146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~ 222 (367)
T 3l9p_A 146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRV 222 (367)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCC
T ss_pred CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCce
Confidence 557899999999999999998765322 223589999999999999999999999 999999999999999555 5
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RR 907 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~ 907 (997)
+||+|||+|+....... ........||+.|+|||++. +..++.++|||||||++|||++ |.
T Consensus 223 ~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DvwslG~il~ellt~g~ 284 (367)
T 3l9p_A 223 AKIGDFGMARDIYRAGY------YRKGGCAMLPVKWMPPEAFM------------EGIFTSKTDTWSFGVLLWEIFSLGY 284 (367)
T ss_dssp EEECCCHHHHHHHHHSS------CTTCCGGGSCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EEECCCccccccccccc------cccCCCcCCcccEECHHHhc------------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999986532111 11223356799999997764 4668999999999999999998 99
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.||.... ..+........ ..+ ..+..++..+.+++.+||+.||++||++.|+++.|+.
T Consensus 285 ~pf~~~~-----~~~~~~~i~~~-----~~~------------~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 285 MPYPSKS-----NQEVLEFVTSG-----GRM------------DPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp CSSTTCC-----HHHHHHHHHTT-----CCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCCC-----HHHHHHHHHcC-----CCC------------CCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 9987431 12211111100 000 0111234568899999999999999999999999999
Q ss_pred HHHHh
Q 001908 988 ARQTL 992 (997)
Q Consensus 988 ~~~~~ 992 (997)
+.+..
T Consensus 343 ~~~~~ 347 (367)
T 3l9p_A 343 CTQDP 347 (367)
T ss_dssp HHHCH
T ss_pred HhhCh
Confidence 87643
No 78
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.7e-38 Score=354.98 Aligned_cols=252 Identities=21% Similarity=0.263 Sum_probs=201.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchh------hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG------ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.+.|++.+.||+|+||+||+|+.+.+|+.||+|+++..... ..+.+.+|++++++++||||+++++++ .
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~ 85 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY-----E 85 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE-----E
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE-----E
Confidence 46799999999999999999999999999999999743221 346789999999999999999999995 4
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC----
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---- 827 (997)
.....++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~ 156 (361)
T 2yab_A 86 NRTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (361)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred eCCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCcc
Confidence 4668999999999999999997654 488999999999999999999999 999999999999998877
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||+|+..... .......||+.|+|||++. +..++.++||||+||++|+|++|.
T Consensus 157 ~vkl~DFG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslGvil~~ll~g~ 215 (361)
T 2yab_A 157 HIKLIDFGLAHEIEDG---------VEFKNIFGTPEFVAPEIVN------------YEPLGLEADMWSIGVITYILLSGA 215 (361)
T ss_dssp CEEECCCSSCEECCTT---------CCCCCCCSCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEecCCceEcCCC---------CccccCCCCccEECchHHc------------CCCCCccccHHHHHHHHHHHHhCC
Confidence 7999999999865221 1223457999999997664 467899999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.||.... ..+.......... ..++ .........+.+++.+||..||++|||+.|+++
T Consensus 216 ~Pf~~~~-----~~~~~~~i~~~~~--~~~~------------~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 216 SPFLGDT-----KQETLANITAVSY--DFDE------------EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp CSSCCSS-----HHHHHHHHHTTCC--CCCH------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCCC-----HHHHHHHHHhcCC--CCCc------------hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 9997431 1111111100000 0000 111123456789999999999999999999974
No 79
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=6e-39 Score=359.80 Aligned_cols=294 Identities=23% Similarity=0.343 Sum_probs=207.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHH--HhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEV--LRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|+. +++.||||++..... ..+..|.++ +..++|+||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 46899999999999999999987 789999999964432 334444444 45689999999998766554556667
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC------CCCcEecCCCCCCeeeCCCCcE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------QPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.++||||+++|+|.+++.... .++..+++++.||+.||+|||+.+ .++|+||||||+||+++.++.+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~ 159 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTC 159 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCE
T ss_pred EEEEEecCCCCcHHHHHhhcc-------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcE
Confidence 899999999999999998764 578899999999999999999873 3389999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+.....................||+.|+|||++..... ......++.++|||||||++|||++|..|
T Consensus 160 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-----~~~~~~~~~~~DiwslG~il~ell~g~~p 234 (336)
T 3g2f_A 160 VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVN-----LRDXESALKQVDMYALGLIYWEIFMRCTD 234 (336)
T ss_dssp EECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCC-----GGGHHHHHHHHHHHHHHHHHHHHHTTBGG
T ss_pred EEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcc-----cccccccccccchHHHHHHHHHHHhcCCc
Confidence 9999999987643222111122223334579999999988753110 00013467789999999999999999777
Q ss_pred CCcCcCCCc---cHHHHHHhhcc-hhhhh-----hcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 910 TNCMFQGGL---TLHEFCKMALP-EKVME-----TVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 910 ~~~~~~~~~---~~~~~~~~~~~-~~~~~-----~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
|........ ........... ..... ...+.+...+. ....+++++.+++.+||+.||++|||++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~Rps~~e 308 (336)
T 3g2f_A 235 LFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK------ENSLAVRSLKETIEDCWDQDAEARLTAQX 308 (336)
T ss_dssp GSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC------CCSHHHHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc------cccchHHHHHHHHHHHhcCChhhCcchHH
Confidence 653322111 00000000000 00000 00111111111 11235668999999999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 001908 981 VLAKLCAARQTLVG 994 (997)
Q Consensus 981 vl~~L~~~~~~~~~ 994 (997)
+++.|+++...+.+
T Consensus 309 ~l~~L~~ll~~~~~ 322 (336)
T 3g2f_A 309 AEERMAELMMIWER 322 (336)
T ss_dssp HHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999877654
No 80
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=3.8e-38 Score=348.85 Aligned_cols=271 Identities=23% Similarity=0.334 Sum_probs=199.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.++||+|+||+||+|++. +++.||+|++.... ......+.+|++++++++||||+++++++ .....
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 93 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI-----HSERC 93 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE-----CCSSC
T ss_pred HhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE-----ccCCE
Confidence 468999999999999999999996 68999999996432 33356788999999999999999999995 45568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ |+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 94 ~~lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 94 LTLVFEFME-KDLKKVLDENKT-----GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp EEEEEECCS-EEHHHHHHTCTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEcCCC-CCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 999999997 588888876542 388999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||.....
T Consensus 165 ~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 225 (311)
T 3niz_A 165 LARAFGIP--------VRSYTHEVVTLWYRAPDVLMG-----------SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTD 225 (311)
T ss_dssp TCEETTSC--------CC---CCCCCCTTCCHHHHTT-----------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSST
T ss_pred CceecCCC--------cccccCCcccCCcCCHHHhcC-----------CCCCCchHHhHHHHHHHHHHHhCCCCCCCCCh
Confidence 99865221 112233568999999987642 24578999999999999999999999985433
Q ss_pred CCccHHHHHHhh---cchhhhhhcCc-----ccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMA---LPEKVMETVDP-----SLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~---~~~~~~~~~d~-----~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. .+....... .+..+....+. .....+...........+..++.+++.+||..||++|||++|+++
T Consensus 226 ~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 226 DD-QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TT-HHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HH-HHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 32 222222111 01111110000 000000000111111223456789999999999999999999986
No 81
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=1.9e-38 Score=352.36 Aligned_cols=277 Identities=21% Similarity=0.321 Sum_probs=189.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|+++.+++.||+|+++... ....+.+.+|++++++++||||+++++++ ..++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~~ 78 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI-----HTENKL 78 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE-----CCTTEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE-----EECCeE
Confidence 468999999999999999999999899999999997433 33446788999999999999999999995 446689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ |+|.+++...........+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 79 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 154 (317)
T 2pmi_A 79 TLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGL 154 (317)
T ss_dssp EEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSS
T ss_pred EEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCcc
Confidence 99999997 69999998654222223588999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 155 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~ 215 (317)
T 2pmi_A 155 ARAFGIP--------VNTFSSEVVTLWYRAPDVLMG-----------SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215 (317)
T ss_dssp CEETTSC--------CCCCCCCCSCCTTCCHHHHTT-----------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ceecCCC--------cccCCCCcccccccCchHhhC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence 9765221 111233568999999987642 245789999999999999999999999743211
Q ss_pred CccHHHHHHhh-c-chhhhhhc------Ccccccccccch----hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA-L-PEKVMETV------DPSLLLAWSDGR----RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~-~-~~~~~~~~------d~~~~~~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... . +...+..+ .+.......... ..........++.+++.+||..||++|||+.|+++
T Consensus 216 -~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 216 -EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp -HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred -HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 1111111110 0 00000000 000000000000 00001123457889999999999999999999875
No 82
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.1e-38 Score=354.96 Aligned_cols=254 Identities=21% Similarity=0.316 Sum_probs=199.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|+++.+++.||||++.... ....+.+.+|+++++.++||||+++++++. ..+..
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~ 80 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNIQ 80 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCCeE
Confidence 368999999999999999999999999999999986432 233467889999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~ 151 (323)
T 3tki_A 81 YLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGL 151 (323)
T ss_dssp EEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEEEcCCCCcHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeec
Confidence 99999999999999997654 488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
++...... .........||+.|+|||++.. .. ++.++||||+||++|||++|+.||.....
T Consensus 152 a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~------------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~ 213 (323)
T 3tki_A 152 ATVFRYNN------RERLLNKMCGTLPYVAPELLKR------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSD 213 (323)
T ss_dssp CEECEETT------EECCBCSCCSCGGGSCHHHHHC------------SSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred cceeccCC------cccccCCCccCcCccCcHHhcc------------CCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence 97652211 1122234679999999987752 33 37789999999999999999999975433
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......+..... ...+ .......+.+++.+||..||++|||+.|+++
T Consensus 214 ~~~~~~~~~~~~~------~~~~--------------~~~~~~~~~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 214 SCQEYSDWKEKKT------YLNP--------------WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp TSHHHHHHHTTCT------TSTT--------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHhcccc------cCCc--------------cccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 3222222211100 0000 0112445678999999999999999999975
No 83
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-38 Score=370.03 Aligned_cols=254 Identities=28% Similarity=0.385 Sum_probs=205.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|++ .++.||||+++... ..+.+.+|++++++++||||+++++++.. .....+
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~~ 263 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVE----EKGGLY 263 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEEC----TTSCEE
T ss_pred hHHeEEEeeecCcCCeeEEEEEe--cCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEc----CCCceE
Confidence 46788999999999999999998 47899999997543 45789999999999999999999999743 334789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 264 iv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a 336 (450)
T 1k9a_A 264 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 336 (450)
T ss_dssp EEEECCTTCBHHHHHHHHCT----TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEecCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCc
Confidence 99999999999999987642 1368899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+.... ......+++.|+|||++. +..++.++|||||||++|||+| |+.||......
T Consensus 337 ~~~~~-----------~~~~~~~~~~y~aPE~~~------------~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~ 393 (450)
T 1k9a_A 337 KEASS-----------TQDTGKLPVKWTAPEALR------------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 393 (450)
T ss_dssp EECC-----------------CCCTTTSCHHHHH------------SSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT
T ss_pred ccccc-----------cccCCCCCcceeCHHHhc------------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 75311 111235688999997664 4678999999999999999999 99999754322
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.+...+... .+.+.+..++.++.++|.+||+.||++|||+.++++.|+++...
T Consensus 394 --~~~~~i~~~--------------------~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 394 --DVVPRVEKG--------------------YKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp --THHHHHHTT--------------------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --HHHHHHHcC--------------------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 111111100 00111224567889999999999999999999999999998764
No 84
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=8.2e-39 Score=356.93 Aligned_cols=259 Identities=24% Similarity=0.402 Sum_probs=198.7
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcE----EEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTF----VAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||+||+|++..+++. ||+|+++.. .....+.+.+|++++++++||||++++++|..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 88 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEES------
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec------
Confidence 5799999999999999999998777765 577877532 33455789999999999999999999999753
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++|+||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~v~e~~~~g~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~D 160 (327)
T 3poz_A 89 STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp SSEEEEEECCTTCBHHHHHHHSTT-----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred CCeEEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEcc
Confidence 247899999999999999987542 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+|+...... .........+|+.|+|||.+. +..++.++|||||||++|||+| |+.||..
T Consensus 161 fg~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il~ellt~g~~p~~~ 222 (327)
T 3poz_A 161 FGLAKLLGAEE------KEYHAEGGKVPIKWMALESIL------------HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp TTHHHHHTTTC------C-------CCCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcceeEccCCc------ccccccCCCccccccChHHhc------------cCCCCchhhhhhhHHHHHHHHhcCCCCccC
Confidence 99998763221 111223345788999997664 4678999999999999999999 9999974
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... .+........ . .+.+..++.++.+++.+||+.||++||++.|+++.|+++..+
T Consensus 223 ~~~~--~~~~~~~~~~--------~------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 223 IPAS--EISSILEKGE--------R------------LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp CCGG--GHHHHHHTTC--------C------------CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred CCHH--HHHHHHHcCC--------C------------CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 3221 1222111110 0 001112345688999999999999999999999999988754
No 85
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=3.1e-38 Score=363.56 Aligned_cols=267 Identities=23% Similarity=0.268 Sum_probs=205.1
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
.++....++|++.++||+|+||+||+|+.+.+++.||+|+++... ......+.+|+++++.++||||++++++|
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~--- 143 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF--- 143 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE---
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE---
Confidence 344455689999999999999999999999999999999996422 22234578999999999999999999985
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
.+.+..|+||||+++|+|.+++.+... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.
T Consensus 144 --~~~~~~~lV~Ey~~gg~L~~~l~~~~~-----~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~ 213 (437)
T 4aw2_A 144 --QDDNNLYLVMDYYVGGDLLTLLSKFED-----RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGH 213 (437)
T ss_dssp --ECSSEEEEEECCCTTCBHHHHHHTTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred --eeCCEEEEEEecCCCCcHHHHHHHccC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCC
Confidence 446689999999999999999987431 488999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+..... ........+||+.|+|||++.... ..+..++.++|||||||++|||++|+.
T Consensus 214 vkL~DFGla~~~~~~-------~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~~~~~~DvwSlGvil~elltG~~ 279 (437)
T 4aw2_A 214 IRLADFGSCLKLMED-------GTVQSSVAVGTPDYISPEILQAME-------GGKGRYGPECDWWSLGVCMYEMLYGET 279 (437)
T ss_dssp EEECCCTTCEECCTT-------SCEECCSCCSCGGGCCHHHHHHHH-------TSCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred EEEcchhhhhhcccC-------CCcccccccCCcCeeChHHHhhcc-------cCCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence 999999999765221 111223467999999998876311 113568899999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE--RMEMRDVLA 983 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 983 (997)
||... ...+.......... ...-|... .....++.+++.+|+..+|++ ||+++|+++
T Consensus 280 Pf~~~-----~~~~~~~~i~~~~~-~~~~p~~~------------~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 280 PFYAE-----SLVETYGKIMNHKE-RFQFPTQV------------TDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp TTCCS-----SHHHHHHHHHTHHH-HCCCCSSC------------CCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCCCC-----ChhHHHHhhhhccc-cccCCccc------------ccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 99742 12222111111100 00001100 012346778999999998888 999999875
No 86
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5e-38 Score=349.16 Aligned_cols=252 Identities=17% Similarity=0.256 Sum_probs=201.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|+++.+++.||+|++.... .....+.+|+++++.++||||+++++++. +.+..+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~ 77 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFE-----SMEELV 77 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEE-----ETTEEE
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEe-----cCCEEE
Confidence 468999999999999999999999999999999997443 34467889999999999999999999964 455899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC--CCcEEEcccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH--DMVAHVSDFG 835 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DFg 835 (997)
+||||+++|+|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 78 lv~e~~~g~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 78 MIFEFISGLDIFERINTSA-----FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp EEECCCCCCBHHHHHTSSS-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 9999999999999997653 1488999999999999999999999 9999999999999997 7899999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... ........||+.|+|||++. +..++.++||||+||++|||++|..||....
T Consensus 150 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~~ll~g~~pf~~~~- 207 (321)
T 1tki_A 150 QARQLKP---------GDNFRLLFTAPEYYAPEVHQ------------HDVVSTATDMWSLGTLVYVLLSGINPFLAET- 207 (321)
T ss_dssp TCEECCT---------TCEEEEEESCGGGSCHHHHT------------TCEECHHHHHHHHHHHHHHHHHSSCTTCCSS-
T ss_pred CCeECCC---------CCccccccCChhhcCcHHhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCcCCC-
Confidence 9986521 12233467899999997664 4567899999999999999999999997431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+......... .+. ........+.++.+++.+||..||++|||+.|+++
T Consensus 208 ----~~~~~~~i~~~~----~~~----------~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 208 ----NQQIIENIMNAE----YTF----------DEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp ----HHHHHHHHHHTC----CCC----------CHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ----HHHHHHHHHcCC----CCC----------ChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111110000 000 00011123456789999999999999999999987
No 87
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=7.9e-39 Score=359.90 Aligned_cols=272 Identities=25% Similarity=0.391 Sum_probs=209.4
Q ss_pred HHhhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
...++|++.+.||+|+||.||+|++. .+++.||||+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 44 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--- 120 (343)
T 1luf_A 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA--- 120 (343)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC---
T ss_pred ecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc---
Confidence 34578999999999999999999996 34589999999754 3445678899999999999999999999964
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCC------------------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQP------------------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
..+..++||||+++|+|.+++....... ....+++.+++.++.||+.||+|||++ +|
T Consensus 121 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i 195 (343)
T 1luf_A 121 --VGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KF 195 (343)
T ss_dssp --SSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TC
T ss_pred --cCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 3557899999999999999998753210 013589999999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+||||||+||+++.++.+||+|||+++...... .........+|+.|+|||.+. +..++.++
T Consensus 196 vH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~ 257 (343)
T 1luf_A 196 VHRDLATRNCLVGENMVVKIADFGLSRNIYSAD------YYKADGNDAIPIRWMPPESIF------------YNRYTTES 257 (343)
T ss_dssp CCSCCSGGGEEECGGGCEEECCCSCHHHHTGGG------CBC----CCBCGGGCCHHHHH------------HCCCCHHH
T ss_pred ecCCCCcceEEECCCCeEEEeecCCCcccccCc------cccccCCCcccceecChhhhc------------cCCcCccc
Confidence 999999999999999999999999998763211 111223456789999997765 35688999
Q ss_pred hhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCC
Q 001908 892 DVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970 (997)
Q Consensus 892 DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 970 (997)
|||||||++|||+| |..||.... ..+.......... +. .+..++.++.+++.+||..
T Consensus 258 Di~slG~il~el~t~g~~p~~~~~-----~~~~~~~~~~~~~-----~~------------~~~~~~~~l~~li~~~l~~ 315 (343)
T 1luf_A 258 DVWAYGVVLWEIFSYGLQPYYGMA-----HEEVIYYVRDGNI-----LA------------CPENCPLELYNLMRLCWSK 315 (343)
T ss_dssp HHHHHHHHHHHHHTTTCCTTTTSC-----HHHHHHHHHTTCC-----CC------------CCTTCCHHHHHHHHHHTCS
T ss_pred ccHHHHHHHHHHHhcCCCcCCCCC-----hHHHHHHHhCCCc-----CC------------CCCCCCHHHHHHHHHHccc
Confidence 99999999999999 999987431 2222111110000 00 0112356788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhcc
Q 001908 971 SPIERMEMRDVLAKLCAARQTLVGR 995 (997)
Q Consensus 971 dP~~Rps~~evl~~L~~~~~~~~~~ 995 (997)
||++||++.|+++.|+++.+...+.
T Consensus 316 ~p~~Rps~~~~~~~L~~~~~~~~~~ 340 (343)
T 1luf_A 316 LPADRPSFCSIHRILQRMCERAEGT 340 (343)
T ss_dssp SGGGSCCHHHHHHHHHHTTC-----
T ss_pred CcccCCCHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999988766543
No 88
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=348.51 Aligned_cols=252 Identities=21% Similarity=0.278 Sum_probs=201.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.+.|++.+.||+|+||.||+|+.+.+++.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----- 84 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYE----- 84 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEE-----
Confidence 4679999999999999999999999999999999964322 13577899999999999999999999954
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC----
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---- 827 (997)
.....++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 85 ~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~ 155 (326)
T 2y0a_A 85 NKTDVILILELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKP 155 (326)
T ss_dssp CSSEEEEEEECCCSCBHHHHHTTSS------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSC
T ss_pred eCCEEEEEEEcCCCCCHHHHHHhcC------CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCC
Confidence 4568999999999999999997654 488999999999999999999999 999999999999999888
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||+|+..... .......||+.|+|||++. +..++.++||||+||++|||++|+
T Consensus 156 ~~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~~ll~g~ 214 (326)
T 2y0a_A 156 RIKIIDFGLAHKIDFG---------NEFKNIFGTPEFVAPEIVN------------YEPLGLEADMWSIGVITYILLSGA 214 (326)
T ss_dssp CEEECCCTTCEECCTT---------SCCCCCCSCTTTCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCCeECCCC---------CccccccCCcCcCCceeec------------CCCCCcHHHHHHHHHHHHHHHHCc
Confidence 8999999999865211 1123357999999997654 467899999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.||.... ..+...... . ..... .......++..+.+++.+||..||++|||+.|+++
T Consensus 215 ~pf~~~~-----~~~~~~~~~-----~-~~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 215 SPFLGDT-----KQETLANVS-----A-VNYEF--------EDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp CSSCCSS-----HHHHHHHHH-----H-TCCCC--------CHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCC-----HHHHHHHHH-----h-cCCCc--------CccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 9986431 111111100 0 00000 00111223456789999999999999999999986
No 89
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.6e-38 Score=349.76 Aligned_cols=270 Identities=20% Similarity=0.240 Sum_probs=208.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|+...+++.||||++..... .+.+.+|+++++++ +||||+++++++.. .+..
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-----~~~~ 80 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPC-----GKYN 80 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEE-----TTEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEec-----CCcc
Confidence 3579999999999999999999988999999999864332 24578999999999 99999999998543 5589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc-----EEE
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-----AHV 831 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~-----~kl 831 (997)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl 151 (330)
T 2izr_A 81 AMVLELL-GPSLEDLFDLCDR-----TFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHI 151 (330)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEE
T ss_pred EEEEEeC-CCCHHHHHHHcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEE
Confidence 9999999 9999999987531 489999999999999999999999 9999999999999999987 999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+.......... ..........||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 152 ~DFg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell~g~~Pf~ 218 (330)
T 2izr_A 152 IDFALAKEYIDPETKKH-IPYREHKSLTGTARYMSINTHL------------GKEQSRRDDLEALGHMFMYFLRGSLPWQ 218 (330)
T ss_dssp CCCTTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred EEcccceeeecCCCCcc-ccccccCCcCCCccccChHHHc------------CCCCCchhHHHHHHHHHHHHhcCCCCcc
Confidence 99999987633221110 1111234567999999996654 5678999999999999999999999998
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..... ...+........... .... .....++ ++.+++..||+.||.+||++.++.+.|+++.+.
T Consensus 219 ~~~~~--~~~~~~~~i~~~~~~--~~~~-----------~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~ 282 (330)
T 2izr_A 219 GLKAD--TLKERYQKIGDTKRA--TPIE-----------VLCENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDR 282 (330)
T ss_dssp TCCCS--SHHHHHHHHHHHHHH--SCHH-----------HHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccc--cHHHHHHHHHhhhcc--CCHH-----------HHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHH
Confidence 54222 222211111000000 0000 0001124 788999999999999999999999999988776
Q ss_pred h
Q 001908 992 L 992 (997)
Q Consensus 992 ~ 992 (997)
.
T Consensus 283 ~ 283 (330)
T 2izr_A 283 K 283 (330)
T ss_dssp T
T ss_pred c
Confidence 4
No 90
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-38 Score=360.22 Aligned_cols=249 Identities=21% Similarity=0.322 Sum_probs=195.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.++||+|+||+||+|+.+.+++.||+|+++.. .....+.+.+|..+++++ +||||+++++++ ...
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~~ 125 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTE 125 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE-----ECS
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE-----EEC
Confidence 46899999999999999999999999999999999743 233345678899999887 899999999984 456
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.+|.+||+|
T Consensus 126 ~~~~lV~E~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~D 196 (396)
T 4dc2_A 126 SRLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTD 196 (396)
T ss_dssp SEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEEcCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEee
Confidence 68999999999999999998754 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||...
T Consensus 197 FGla~~~~~--------~~~~~~~~~gt~~Y~aPE~l~------------~~~~~~~~DiwslGvllyell~G~~Pf~~~ 256 (396)
T 4dc2_A 197 YGMCKEGLR--------PGDTTSTFCGTPNYIAPEILR------------GEDYGFSVDWWALGVLMFEMMAGRSPFDIV 256 (396)
T ss_dssp CTTCBCCCC--------TTCCBCCCCBCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSSTTT
T ss_pred cceeeeccc--------CCCccccccCCcccCCchhhc------------CCCCChHHHHHHHHHHHHHHHhCCCCCccc
Confidence 999975311 112234568999999997664 567899999999999999999999999743
Q ss_pred cCCC----ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 914 FQGG----LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 914 ~~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
.... ............. ...+ +.....++.+++.+||+.||++||++
T Consensus 257 ~~~~~~~~~~~~~~~~~i~~~------~~~~------------p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 257 GSSDNPDQNTEDYLFQVILEK------QIRI------------PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp TC------CCHHHHHHHHHHC------CCCC------------CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred ccccccchhhHHHHHHHHhcc------ccCC------------CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 2111 1111111111000 0000 11124567799999999999999996
No 91
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=9.9e-39 Score=355.89 Aligned_cols=272 Identities=23% Similarity=0.385 Sum_probs=194.5
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCc---EEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
..++|++.+.||+|+||+||+|++..++. .||||+++.. .....+.+.+|++++++++||||+++++++......
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 44689999999999999999999876664 8999999743 344567899999999999999999999997543211
Q ss_pred -CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 752 -GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 752 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.....++||||+++|+|.+++...........+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEE
Confidence 1122489999999999999997654322233588999999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRP 909 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P 909 (997)
|+|||+|+....... ........+|+.|+|||.+. +..++.++|||||||++|||++ |+.|
T Consensus 178 l~Dfg~a~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell~~g~~p 239 (323)
T 3qup_A 178 VADFGLSRKIYSGDY------YRQGCASKLPVKWLALESLA------------DNLYTVHSDVWAFGVTMWEIMTRGQTP 239 (323)
T ss_dssp ECCCCC-----------------------CCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred Eeecccccccccccc------ccccccccCcccccCchhhc------------CCCCCCccchhhHHHHHHHHHhCCCCC
Confidence 999999986532211 11223345688999997765 4568899999999999999999 8999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
|...... ......... ... ..+..++.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 240 ~~~~~~~--~~~~~~~~~--------~~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 240 YAGIENA--EIYNYLIGG--------NRL------------KQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp TTTCCGG--GHHHHHHTT--------CCC------------CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccccChH--HHHHHHhcC--------CCC------------CCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 8743221 111111000 000 001123457889999999999999999999999999987
Q ss_pred HH
Q 001908 990 QT 991 (997)
Q Consensus 990 ~~ 991 (997)
..
T Consensus 298 ~~ 299 (323)
T 3qup_A 298 GH 299 (323)
T ss_dssp HC
T ss_pred HH
Confidence 53
No 92
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=3.3e-38 Score=357.64 Aligned_cols=282 Identities=17% Similarity=0.220 Sum_probs=208.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCC-----CcEEEEEEecccchhh-----------HHHHHHHHHHHhhcCCCCcce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGEN-----GTFVAVKILNLMQKGA-----------LKSFVAECEVLRNTRHRNLIK 740 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~-----~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~ 740 (997)
..++|++.+.||+|+||+||+|+++.+ ++.||||++....... ...+..|+..++.++|+||++
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 346899999999999999999999754 5789999986443211 123345556677788999999
Q ss_pred EEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCC
Q 001908 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSN 820 (997)
Q Consensus 741 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~N 820 (997)
+++++... ..+....++||||+ +++|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+|
T Consensus 113 ~~~~~~~~-~~~~~~~~lv~e~~-g~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~N 182 (364)
T 3op5_A 113 YWGSGLHD-KNGKSYRFMIMDRF-GSDLQKIYEANAK-----RFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASN 182 (364)
T ss_dssp EEEEEEEE-ETTEEEEEEEEECE-EEEHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred EEeeeeec-cCCcceEEEEEeCC-CCCHHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHH
Confidence 99997653 22345689999999 9999999987531 489999999999999999999999 99999999999
Q ss_pred eeeC--CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 821 VLLD--HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 821 Ill~--~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
|+++ .++.+||+|||+|+.......... ..........||+.|+|||++. +..++.++|||||||
T Consensus 183 ill~~~~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~ 249 (364)
T 3op5_A 183 LLLNYKNPDQVYLVDYGLAYRYCPEGVHKA-YAADPKRCHDGTIEFTSIDAHN------------GVAPSRRGDLEILGY 249 (364)
T ss_dssp EEEESSCTTCEEECCCTTCEESSGGGCCCC-SSCCSSCCCCCCTTTCCHHHHT------------TCCCCHHHHHHHHHH
T ss_pred EEEecCCCCeEEEEECCcceecccCCcccc-cccCcccccCCCCCccCHHHhC------------CCCCCchhhHHHHHH
Confidence 9999 889999999999987633221111 1111223456999999996654 567899999999999
Q ss_pred HHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 899 MLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 899 vl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
++|||+||+.||....... ...............+..++.+. ...++.++.+++..||..||++||++
T Consensus 250 ~l~el~~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~li~~cl~~~p~~RP~~ 317 (364)
T 3op5_A 250 CMIQWLTGHLPWEDNLKDP-KYVRDSKIRYRENIASLMDKCFP-----------AANAPGEIAKYMETVKLLDYTEKPLY 317 (364)
T ss_dssp HHHHHHHSCCTTGGGTTCH-HHHHHHHHHHHHCHHHHHHHHSC-----------TTCCCHHHHHHHHHHHTCCTTCCCCH
T ss_pred HHHHHHhCCCCccccccCH-HHHHHHHHHhhhhHHHHHHHhcc-----------cccCHHHHHHHHHHHhcCCCCCCCCH
Confidence 9999999999998533221 11221121222222222221110 01235678899999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q 001908 979 RDVLAKLCAARQTLV 993 (997)
Q Consensus 979 ~evl~~L~~~~~~~~ 993 (997)
.++++.|+++.++..
T Consensus 318 ~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 318 ENLRDILLQGLKAIG 332 (364)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999887653
No 93
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.1e-38 Score=346.22 Aligned_cols=259 Identities=25% Similarity=0.401 Sum_probs=203.5
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||+||+|+++ ++..||+|+++.... ..+.+.+|++++++++||||+++++++ ......
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~ 94 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVC-----TKQRPI 94 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEE-----CSSSSE
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEE-----ecCCCe
Confidence 3568999999999999999999997 778899999975432 236789999999999999999999995 345679
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 95 ~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~ 166 (283)
T 3gen_A 95 FIITEYMANGCLLNYLREMRH-----RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGL 166 (283)
T ss_dssp EEEECCCTTCBHHHHHHCGGG-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTG
T ss_pred EEEEeccCCCcHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEccccc
Confidence 999999999999999987431 488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
++.... ..........+|+.|+|||.+. +..++.++||||+||++|||+| |+.||....
T Consensus 167 ~~~~~~-------~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~- 226 (283)
T 3gen_A 167 SRYVLD-------DEYTSSVGSKFPVRWSPPEVLM------------YSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT- 226 (283)
T ss_dssp GGGBCC-------HHHHSTTSTTSCGGGCCHHHHH------------HCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC-
T ss_pred cccccc-------cccccccCCccCcccCCHHHhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCccccC-
Confidence 986522 1112223345688899997765 3568899999999999999998 999987432
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..+..... ........ +..++..+.+++.+||+.||++|||++|+++.|.++.++
T Consensus 227 ----~~~~~~~~-----~~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 227 ----NSETAEHI-----AQGLRLYR------------PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp ----HHHHHHHH-----HTTCCCCC------------CTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred ----hhHHHHHH-----hcccCCCC------------CCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 11111111 11111000 011235678999999999999999999999999998865
No 94
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=6.2e-38 Score=354.19 Aligned_cols=254 Identities=21% Similarity=0.311 Sum_probs=201.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..++|++.+.||+|+||.||+|+++.+++.||+|++... .....+.+.+|++++++++||||+++++++. ..+
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-----~~~ 101 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EES 101 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCC
Confidence 457899999999999999999999999999999999643 3345577899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl 831 (997)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++ .+||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 172 (362)
T 2bdw_A 102 FHYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKL 172 (362)
T ss_dssp EEEEEECCCCSCBHHHHHTTCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEE
T ss_pred EEEEEEecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 8999999999999999998654 478999999999999999999999 999999999999998654 5999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+..... .......||+.|+|||++. +..++.++||||+||++|||++|+.||.
T Consensus 173 ~DfG~a~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~~ll~g~~Pf~ 231 (362)
T 2bdw_A 173 ADFGLAIEVNDS---------EAWHGFAGTPGYLSPEVLK------------KDPYSKPVDIWACGVILYILLVGYPPFW 231 (362)
T ss_dssp CCCTTCBCCTTC---------CSCCCSCSCTTTCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred eecCcceEecCC---------cccccCCCCccccCHHHHc------------cCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 999999765221 1223457999999997664 4678999999999999999999999987
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... ..+......... .....+. ...++.++.+++.+||..||++||++.|+++.
T Consensus 232 ~~~-----~~~~~~~i~~~~-~~~~~~~-------------~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 232 DED-----QHRLYAQIKAGA-YDYPSPE-------------WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CSS-----HHHHHHHHHHTC-CCCCTTG-------------GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCC-----HHHHHHHHHhCC-CCCCccc-------------ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 431 122111110000 0000000 01224567899999999999999999998753
No 95
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=354.99 Aligned_cols=283 Identities=26% Similarity=0.409 Sum_probs=212.2
Q ss_pred hhcCccCCcccccCcceEEEEEE----CCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.. .+.
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~ 116 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS---AGR 116 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC------
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe---cCC
Confidence 35789999999999999999994 56889999999987666677889999999999999999999998643 224
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 117 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~D 188 (326)
T 2w1i_A 117 RNLKLIMEYLPYGSLRDYLQKHKE-----RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGD 188 (326)
T ss_dssp -CCEEEECCCTTCBHHHHHHHSTT-----SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECC
T ss_pred CceEEEEECCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEec
Confidence 468999999999999999987642 378999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++...... ..........++..|+|||.+. +..++.++|||||||++|||+||..||...
T Consensus 189 fg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~tg~~~~~~~ 251 (326)
T 2w1i_A 189 FGLTKVLPQDK-----EYYKVKEPGESPIFWYAPESLT------------ESKFSVASDVWSFGVVLYELFTYIEKSKSP 251 (326)
T ss_dssp CTTCEECCSSC-----SEEECSSCCSCCGGGCCHHHHH------------HCEEEHHHHHHHHHHHHHHHHHTTCGGGSH
T ss_pred Ccchhhccccc-----cccccccCCCCceeEECchhhc------------CCCCCchhhHHHHHHHHHHHHhcCCCCCCC
Confidence 99998753211 1111122345778899998765 356788999999999999999999997632
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
. .++................+..........+.+..++.++.+++.+||..||++|||+.|+++.|+++.+.+.
T Consensus 252 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~l~ 325 (326)
T 2w1i_A 252 P------AEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQMA 325 (326)
T ss_dssp H------HHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred H------HHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhc
Confidence 1 1111110000000000000000000000111122346778999999999999999999999999999998775
Q ss_pred c
Q 001908 994 G 994 (997)
Q Consensus 994 ~ 994 (997)
|
T Consensus 326 g 326 (326)
T 2w1i_A 326 G 326 (326)
T ss_dssp C
T ss_pred C
Confidence 3
No 96
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=8.7e-38 Score=361.26 Aligned_cols=255 Identities=20% Similarity=0.270 Sum_probs=201.6
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
...++|++.+.||+|+||+||+|..+.+++.||+|++.... ....+.+.+|++++++++||||+++++++ ...
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~-----~~~ 82 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI-----SEE 82 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE-----ECS
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE-----EEC
Confidence 34678999999999999999999999999999999997432 34456789999999999999999999995 456
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC---CCCcEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAH 830 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~---~~~~~k 830 (997)
+..++||||+++|+|.+++.... .+++..+..++.||+.|++|||++ +|+||||||+||+++ .++.+|
T Consensus 83 ~~~~lv~E~~~gg~L~~~i~~~~------~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vk 153 (444)
T 3soa_A 83 GHHYLIFDLVTGGELFEDIVARE------YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVK 153 (444)
T ss_dssp SEEEEEECCCBCCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEE
T ss_pred CEEEEEEEeCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEE
Confidence 68999999999999999998764 488999999999999999999999 999999999999998 568899
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+..... ........||+.|+|||++. +..++.++||||+||++|+|++|..||
T Consensus 154 L~DFG~a~~~~~~--------~~~~~~~~gt~~Y~APE~l~------------~~~~~~~~DIwSlGvilyell~G~~Pf 213 (444)
T 3soa_A 154 LADFGLAIEVEGE--------QQAWFGFAGTPGYLSPEVLR------------KDPYGKPVDLWACGVILYILLVGYPPF 213 (444)
T ss_dssp ECCCSSCBCCCTT--------CCBCCCSCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred EccCceeEEecCC--------CceeecccCCcccCCHHHhc------------CCCCCCccccHHHHHHHHHHHhCCCCC
Confidence 9999999765221 11223467999999997664 467899999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+......... .....+. ...+++++.+++.+||..||++|||+.|+++
T Consensus 214 ~~~~-----~~~~~~~i~~~~-~~~~~~~-------------~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 214 WDED-----QHRLYQQIKAGA-YDFPSPE-------------WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CCSS-----HHHHHHHHHHTC-CCCCTTT-------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCcc-----HHHHHHHHHhCC-CCCCccc-------------cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 6421 222111110000 0000000 0122456789999999999999999999976
No 97
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-38 Score=353.37 Aligned_cols=246 Identities=25% Similarity=0.355 Sum_probs=197.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|.+.+.||+|+||+||+|++..+++.||||++.... ......+.+|+++++.++||||+++++++. .+..
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~-----~~~~ 83 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT-----TPTD 83 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence 57999999999999999999999999999999986322 223457889999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+ +|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 84 ~~lv~E~~-~g~l~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 84 IVMVIEYA-GGELFDYIVEKK------RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp EEEEECCC-CEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred EEEEEECC-CCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 99999999 789999987754 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|..... .......+||+.|+|||++. +..+ ++++||||+||++|||++|+.||....
T Consensus 154 ~s~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~ 212 (336)
T 3h4j_B 154 LSNIMTD---------GNFLKTSCGSPNYAAPEVIN------------GKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF 212 (336)
T ss_dssp CTBTTTT---------SBTTCCCTTSTTTSCGGGSC------------CSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred cceeccC---------CcccccccCCcCcCCHHHHc------------CCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence 9976522 12223457999999997654 3444 689999999999999999999997432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
... .... +.... ...+...++.+.+++.+||..||++|||++|+++
T Consensus 213 ~~~----------~~~~----i~~~~---------~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 213 IPN----------LFKK----VNSCV---------YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp STT----------CBCC----CCSSC---------CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHH----------HHHH----HHcCC---------CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 111 0000 00000 0001123456789999999999999999999975
No 98
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.3e-38 Score=351.44 Aligned_cols=274 Identities=25% Similarity=0.388 Sum_probs=205.4
Q ss_pred hhcCccCCcccccCcceEEEEE----ECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGI----LGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~----~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.+.|++.+.||+|+||.||+|+ ...+++.||||+++.. .....+.+.+|++++++++||||+++++++... +
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---~ 96 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTED---G 96 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---C
Confidence 3568999999999999999999 4568899999999743 333457889999999999999999999997532 2
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....++||||+++|+|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~ 168 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKNKN-----KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIG 168 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred CceEEEEEEeCCCCcHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEEC
Confidence 3568999999999999999966542 388999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+++...... ..........||..|+|||.+. +..++.++||||+||++|||+||..|+..
T Consensus 169 Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~ 231 (302)
T 4e5w_A 169 DFGLTKAIETDK-----EYYTVKDDRDSPVFWYAPECLM------------QSKFYIASDVWSFGVTLHELLTYCDSDSS 231 (302)
T ss_dssp CCTTCEECCTTC-----CEEECCCCTTCCGGGCCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred cccccccccCCC-----cceeccCCCCCCccccCCeeec------------CCCCCcchhHHHHHHHHHHHHHccCCCcc
Confidence 999998753211 1112233456888999997765 35678899999999999999999998652
Q ss_pred CcCCCccHHHHHHhhcc---hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALP---EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
. .........+ .......... ...+...+.+..++.++.+++.+||+.||++|||+.|+++.|+++.
T Consensus 232 ~------~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 232 P------MALFLKMIGPTHGQMTVTRLVNT----LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp H------HHHHHHHHCSCCGGGHHHHHHHH----HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h------hhHHhhccCCcccccCHHHHHHH----HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2 1111111000 0000000000 0000111112234567889999999999999999999999999875
No 99
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6e-38 Score=345.30 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=193.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch--------------------------hhHHHHHHHHHHHh
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--------------------------GALKSFVAECEVLR 731 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~ 731 (997)
.++|++.+.||+|+||.||+|++..+++.||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 3679999999999999999999999999999999864321 12356889999999
Q ss_pred hcCCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 732 NTRHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 732 ~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
+++||||+++++++.. ...+..++||||+++++|.+++... .+++..++.++.|++.||+|||++ +|
T Consensus 92 ~l~h~~iv~~~~~~~~---~~~~~~~lv~e~~~~~~l~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i 158 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDD---PNEDHLYMVFELVNQGPVMEVPTLK-------PLSEDQARFYFQDLIKGIEYLHYQ---KI 158 (298)
T ss_dssp TCCCTTBCCEEEEEEC---SSSSEEEEEEECCTTCBSCCSSCSS-------CCCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hCCCCCCCeEEEEEEc---CCCCEEEEEEecCCCCcHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---Ce
Confidence 9999999999999753 2256899999999999998765432 489999999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+||||||+||+++.++.+||+|||+|+..... ........||+.|+|||++.... ...++.++
T Consensus 159 vH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~~~---------~~~~~~~~ 221 (298)
T 2zv2_A 159 IHRDIKPSNLLVGEDGHIKIADFGVSNEFKGS--------DALLSNTVGTPAFMAPESLSETR---------KIFSGKAL 221 (298)
T ss_dssp ECCCCCGGGEEECTTSCEEECCCTTCEECSSS--------SCEECCCCSCGGGCCGGGCCTTC---------CCEESHHH
T ss_pred eccCCCHHHEEECCCCCEEEecCCCccccccc--------cccccCCcCCccccChhhhccCC---------CCCCCchh
Confidence 99999999999999999999999999865221 11223457999999997764210 01147789
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|||||||++|||++|+.||... .............. .. +. ...++.++.+++.+||..|
T Consensus 222 Di~slG~~l~~l~~g~~pf~~~-----~~~~~~~~~~~~~~-~~--~~-------------~~~~~~~l~~li~~~l~~d 280 (298)
T 2zv2_A 222 DVWAMGVTLYCFVFGQCPFMDE-----RIMCLHSKIKSQAL-EF--PD-------------QPDIAEDLKDLITRMLDKN 280 (298)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCS-----SHHHHHHHHHHCCC-CC--CS-------------SSCCCHHHHHHHHHHTCSC
T ss_pred hhHhHHHHHHHHHHCCCCCCCc-----cHHHHHHHHhcccC-CC--CC-------------ccccCHHHHHHHHHHhhcC
Confidence 9999999999999999998742 12211111100000 00 00 0112456789999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|++|||+.|+++
T Consensus 281 p~~R~s~~e~l~ 292 (298)
T 2zv2_A 281 PESRIVVPEIKL 292 (298)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCCCHHHHhc
Confidence 999999999875
No 100
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=9.8e-39 Score=345.82 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=204.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|+++ ++..||+|+++.... ..+.+.+|++++++++||||+++++++ ......+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~~~~ 79 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVC-----SKEYPIY 79 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSSSEE
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCCceE
Confidence 468999999999999999999887 677899999975432 336789999999999999999999995 3456799
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~ 151 (268)
T 3sxs_A 80 IVTEYISNGCLLNYLRSHG-----KGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMT 151 (268)
T ss_dssp EEEECCTTCBHHHHHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCE
T ss_pred EEEEccCCCcHHHHHHHcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccc
Confidence 9999999999999998753 1388999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+...... ........+|+.|+|||.+. +..++.++||||+|+++|||+| |+.||....
T Consensus 152 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-- 210 (268)
T 3sxs_A 152 RYVLDDQ-------YVSSVGTKFPVKWSAPEVFH------------YFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT-- 210 (268)
T ss_dssp EECCTTC-------EEECCSCCCCGGGCCHHHHH------------HSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC--
T ss_pred eecchhh-------hhcccCCCcCcccCCHHHHh------------ccCCchhhhhHHHHHHHHHHHcCCCCCccccC--
Confidence 8653211 11223345678899997765 3567889999999999999999 999987431
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..+......... ....+ ..++..+.+++..||+.||++|||+.|+++.|+++.+.
T Consensus 211 ---~~~~~~~~~~~~--~~~~~---------------~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 211 ---NSEVVLKVSQGH--RLYRP---------------HLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp ---HHHHHHHHHTTC--CCCCC---------------TTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred ---hHHHHHHHHcCC--CCCCC---------------CcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 111111110000 00001 11234678999999999999999999999999887653
No 101
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-38 Score=348.94 Aligned_cols=264 Identities=25% Similarity=0.432 Sum_probs=212.1
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
+...++|++.+.||+|+||+||+|+++.++..||+|++.... ...+.+.+|++++++++||||+++++++ ...+
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~-----~~~~ 82 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVC-----TREP 82 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEE-----CSSS
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEE-----ccCC
Confidence 345678999999999999999999999889999999997543 3457889999999999999999999995 3456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~~v~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Df 155 (288)
T 3kfa_A 83 PFYIITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADF 155 (288)
T ss_dssp SEEEEEECCTTEEHHHHHHHCCT----TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCC
T ss_pred CEEEEEEcCCCCcHHHHHHhccc----CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccC
Confidence 79999999999999999987542 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.++..... .........+|+.|+|||.+. +..++.++||||+|+++|+|++ |..||...
T Consensus 156 g~~~~~~~~-------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~ll~~g~~p~~~~ 216 (288)
T 3kfa_A 156 GLSRLMTGD-------TYTAHAGAKFPIKWTAPESLA------------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 216 (288)
T ss_dssp CGGGTSCSS-------SSEEETTEEECGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred ccceeccCC-------ccccccCCccccCcCChhhhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999865321 112233456788999997764 4568899999999999999999 99998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
... ...+..... .... .+..++..+.+++.+||..||++|||+.|+++.|+++.++.
T Consensus 217 ~~~--~~~~~~~~~--------~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 217 DLS--QVYELLEKD--------YRME------------RPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp CGG--GHHHHHHTT--------CCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred CHH--HHHHHHhcc--------CCCC------------CCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 211 111111110 0000 01123467889999999999999999999999999877653
No 102
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-37 Score=345.65 Aligned_cols=287 Identities=24% Similarity=0.379 Sum_probs=207.4
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc--CCCCcceEEeeeeccCcC
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT--RHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~l~~~~~~~~~~ 751 (997)
.....++|++.+.||+|+||+||+|++ +++.||||++.... ...+.+|.+++... +||||+++++++.... .
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~ 105 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKW--RGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGT-G 105 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC-G
T ss_pred ccccccceEEEeEeecCCCeEEEEEEE--CCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCC-C
Confidence 344567999999999999999999998 48999999986432 24455666666554 8999999999976431 2
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC-----CCCcEecCCCCCCeeeCCC
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC-----QPPIVHGDLKPSNVLLDHD 826 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~-----~~~ivHrDlk~~NIll~~~ 826 (997)
.....++||||+++|+|.++++... +++..++.++.|++.||+|||+++ .++|+||||||+||+++.+
T Consensus 106 ~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~ 178 (337)
T 3mdy_A 106 SWTQLYLITDYHENGSLYDYLKSTT-------LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178 (337)
T ss_dssp GGCEEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTT
T ss_pred CCCceEEEEeccCCCcHHHHhhccC-------CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCC
Confidence 2257899999999999999997653 889999999999999999999762 3489999999999999999
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
+.+||+|||+|+........ .........||+.|+|||++..... .....++.++|||||||++|||+||
T Consensus 179 ~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~DiwslG~il~el~tg 248 (337)
T 3mdy_A 179 GTCCIADLGLAVKFISDTNE----VDIPPNTRVGTKRYMPPEVLDESLN------RNHFQSYIMADMYSFGLILWEVARR 248 (337)
T ss_dssp SCEEECCCTTCEECC-------------CCSSCSCGGGCCHHHHTTCCC------TTCTHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEeCCCceeecccccc----ccCCCCCCccCcceeChhhcccccC------CccccCccccchHHHHHHHHHHHhc
Confidence 99999999999765322111 1111224579999999987753110 0001112349999999999999999
Q ss_pred ----------CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 907 ----------RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 907 ----------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
+.||..................... ..+.... .....+++.++.+++.+||+.||++||
T Consensus 249 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~~~l~~li~~~l~~dP~~Rp 317 (337)
T 3mdy_A 249 CVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK----LRPSFPN-------RWSSDECLRQMGKLMTECWAHNPASRL 317 (337)
T ss_dssp BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCG-------GGGGSHHHHHHHHHHHHHSCSSGGGSC
T ss_pred cCcccccccccccHhhhcCCCCchhhhHHHHhhhc----cCccccc-------cchhhHHHHHHHHHHHHhhhhChhhCC
Confidence 6666544333333333222111111 1111110 112236788899999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhc
Q 001908 977 EMRDVLAKLCAARQTLVG 994 (997)
Q Consensus 977 s~~evl~~L~~~~~~~~~ 994 (997)
|+.|+++.|+++.++...
T Consensus 318 s~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 318 TALRVKKTLAKMSESQDI 335 (337)
T ss_dssp CHHHHHHHHHHHHHTTTC
T ss_pred CHHHHHHHHHHHHhhccc
Confidence 999999999999887643
No 103
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-38 Score=354.61 Aligned_cols=250 Identities=23% Similarity=0.336 Sum_probs=196.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (997)
..++|++.+.||+|+||+||+|+.+.+++.||||+++.. .....+.+.+|+++++.+ +||||+++++++ ..
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~-----~~ 95 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF-----QT 95 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE-----EC
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE-----Ee
Confidence 346899999999999999999999999999999999743 234456788999999988 799999999984 45
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..|+||||+++|+|.+++.+.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~ 166 (353)
T 3txo_A 96 PDRLFFVMEFVNGGDLMFHIQKSR------RFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLA 166 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEc
Confidence 668999999999999999998764 488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 167 DFG~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 167 DFGMCKEGIC--------NGVTTATFCGTPDYIAPEILQ------------EMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp CCTTCBCSCC-----------------CCGGGCCHHHHH------------HHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred cccceeeccc--------CCccccccCCCcCeEChhhcC------------CCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 9999975311 122334568999999998775 34578899999999999999999999974
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH------HHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM------RDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~------~evl~ 983 (997)
. ...+......... ... +......+.+++.+|+..||++||++ .|+++
T Consensus 227 ~-----~~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 227 E-----NEDDLFEAILNDE------VVY------------PTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp S-----SHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred C-----CHHHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 3 1222211111100 000 01123457789999999999999998 66654
No 104
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=2.4e-38 Score=351.29 Aligned_cols=267 Identities=24% Similarity=0.371 Sum_probs=209.4
Q ss_pred HhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
..++|.+.+.||+|+||.||+|++ +.+++.||||+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---- 96 (314)
T 2ivs_A 21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACS---- 96 (314)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC----
T ss_pred chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEe----
Confidence 357899999999999999999987 345689999999743 3445678899999999999999999999953
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCC------------------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQP------------------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIV 812 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~------------------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~iv 812 (997)
..+..++||||+++|+|.+++....... ....+++..+++++.|++.||+|||++ +|+
T Consensus 97 -~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iv 172 (314)
T 2ivs_A 97 -QDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLV 172 (314)
T ss_dssp -SSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred -cCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCc
Confidence 4557999999999999999998764311 112378999999999999999999999 999
Q ss_pred ecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccch
Q 001908 813 HGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892 (997)
Q Consensus 813 HrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~D 892 (997)
||||||+||+++.++.+||+|||+++...... .........+|+.|+|||.+. +..++.++|
T Consensus 173 H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~D 234 (314)
T 2ivs_A 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEED------SYVKRSQGRIPVKWMAIESLF------------DHIYTTQSD 234 (314)
T ss_dssp CCCCSGGGEEEETTTEEEECCCTTCEECTTTS------CEECSSCCCSCGGGCCHHHHH------------HCEECHHHH
T ss_pred ccccchheEEEcCCCCEEEccccccccccccc------cceeccCCCCcccccChhhhc------------CCCcCchhh
Confidence 99999999999999999999999998653211 111223345788999997765 356889999
Q ss_pred hHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 893 VYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 893 vwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|||+||++|||++ |+.||...... .+.+..... ..+. .+..++.++.+++.+||+.|
T Consensus 235 i~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~--------~~~~------------~~~~~~~~~~~li~~~l~~d 292 (314)
T 2ivs_A 235 VWSFGVLLWEIVTLGGNPYPGIPPE--RLFNLLKTG--------HRME------------RPDNCSEEMYRLMLQCWKQE 292 (314)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTCCGG--GHHHHHHTT--------CCCC------------CCTTCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHhhcC--------CcCC------------CCccCCHHHHHHHHHHccCC
Confidence 9999999999999 99998743221 111111110 0000 01123557889999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q 001908 972 PIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 972 P~~Rps~~evl~~L~~~~~~ 991 (997)
|++||++.|+++.|+++.++
T Consensus 293 p~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 293 PDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GGGSCCHHHHHHHHHHHHHT
T ss_pred hhhCcCHHHHHHHHHHHHhh
Confidence 99999999999999998764
No 105
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.1e-38 Score=349.24 Aligned_cols=276 Identities=24% Similarity=0.403 Sum_probs=202.9
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECC---CCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGE---NGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
.....++|.+.+.||+|+||+||+|+... +++.||+|+++.. .....+.+.+|++++++++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 33455789999999999999999998764 4568999999743 344557889999999999999999999998654
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
+.......++||||+++|+|.+++...........+++..++.++.|++.||.|||++ +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 4333345799999999999999996543222334589999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RR 907 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~ 907 (997)
+||+|||+++....... ........+++.|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 186 ~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~~g~ 247 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDY------YRQGRIAKMPVKWIAIESLA------------DRVYTSKSDVWAFGVTMWEIATRGM 247 (313)
T ss_dssp EEECSCSCC----------------------CCGGGSCHHHHH------------SSCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred EEEeecCcceecccccc------cCcccccCCCccccCchhhc------------CCCccchhhhHHHHHHHHHHHhcCC
Confidence 99999999986532111 11223345788999997664 4678899999999999999999 88
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.||...... ........ ...+. .+..++.++.+++.+||..||++|||+.++++.|++
T Consensus 248 ~p~~~~~~~--~~~~~~~~--------~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 248 TPYPGVQNH--EMYDYLLH--------GHRLK------------QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp CSSTTCCGG--GHHHHHHT--------TCCCC------------CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCccCCHH--HHHHHHHc--------CCCCC------------CCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 898643211 11111110 00000 011234578899999999999999999999999999
Q ss_pred HHHHh
Q 001908 988 ARQTL 992 (997)
Q Consensus 988 ~~~~~ 992 (997)
+.+.+
T Consensus 306 l~~~l 310 (313)
T 3brb_A 306 LLESL 310 (313)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 98765
No 106
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-38 Score=360.36 Aligned_cols=266 Identities=24% Similarity=0.447 Sum_probs=197.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCC---cEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENG---TFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..|++.+.||+|+||+||+|++..++ ..||+|+++.. .....+.+.+|++++++++||||++++++|. ...+
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~----~~~~ 164 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEG 164 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC----CCSS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE----cCCC
Confidence 35677889999999999999875332 46899998643 3455678999999999999999999999873 3345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++..... .+++..++.++.||++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 165 ~~~lv~e~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DF 236 (373)
T 3c1x_A 165 SPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADF 236 (373)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC
T ss_pred CeEEEEECCCCCCHHHHHhhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeec
Confidence 78999999999999999986542 378889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|+|+........ .........+|+.|+|||.+. +..++.++|||||||++|||+| |.+||...
T Consensus 237 G~a~~~~~~~~~----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwSlG~il~ellt~~~~p~~~~ 300 (373)
T 3c1x_A 237 GLARDMYDKEFD----SVHNKTGAKLPVKWMALESLQ------------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 300 (373)
T ss_dssp -------------------------CCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTS
T ss_pred cccccccccccc----cccccCCCCCcccccChHHhc------------CCCCCcHHHHHHHHHHHHHHHhCcCCCCCCC
Confidence 999866332111 111223356788999997765 4678899999999999999999 67777643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
... .......... .+ ..+..++..+.+++.+||+.||++|||+.|+++.|+++...+.
T Consensus 301 ~~~--~~~~~~~~~~--------~~------------~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 301 NTF--DITVYLLQGR--------RL------------LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp CSS--CHHHHHHTTC--------CC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred CHH--HHHHHHHcCC--------CC------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 221 1221111100 00 0112235678899999999999999999999999999987665
Q ss_pred c
Q 001908 994 G 994 (997)
Q Consensus 994 ~ 994 (997)
+
T Consensus 359 ~ 359 (373)
T 3c1x_A 359 G 359 (373)
T ss_dssp S
T ss_pred c
Confidence 4
No 107
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.4e-38 Score=355.29 Aligned_cols=271 Identities=24% Similarity=0.369 Sum_probs=210.4
Q ss_pred hcCccCCcccccCcceEEEEEE----CCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGIL----GENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||.||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~~ 99 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG---PGRQ 99 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC---SSSC
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec---CCCc
Confidence 6899999999999999999994 56889999999987766677889999999999999999999998753 2456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Df 171 (327)
T 3lxl_A 100 SLRLVMEYLPSGCLRDFLQRHRA-----RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADF 171 (327)
T ss_dssp EEEEEEECCTTCBHHHHHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCG
T ss_pred eEEEEEeecCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEccc
Confidence 78999999999999999987431 388999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++...... ..........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 172 g~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 234 (327)
T 3lxl_A 172 GLAKLLPLDK-----DYYVVREPGQSPIFWYAPESLS------------DNIFSRQSDVWSFGVVLYELFTYCDKSCSPS 234 (327)
T ss_dssp GGCEECCTTC-----SEEECSSCCCSCGGGSCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred ccceecccCC-----ccceeeccCCccccccCHHHhc------------cCCCChHHhHHHHHHHHHHHHhCCCCCcccc
Confidence 9998653211 1112223356888999997765 3567889999999999999999999986321
Q ss_pred CCCccHHHHHHhhc-c------hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMAL-P------EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 915 ~~~~~~~~~~~~~~-~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
. +...... . ......+. .+...+.+..++.++.+++.+||+.||++|||+.|+++.|++
T Consensus 235 ~------~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~ 300 (327)
T 3lxl_A 235 A------EFLRMMGCERDVPALSRLLELLE--------EGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDM 300 (327)
T ss_dssp H------HHHHHCC----CCHHHHHHHHHH--------TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred c------hhhhhcccccccccHHHHHHHhh--------cccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1 1111000 0 00000000 001111122345678899999999999999999999999998
Q ss_pred HHHH
Q 001908 988 ARQT 991 (997)
Q Consensus 988 ~~~~ 991 (997)
+...
T Consensus 301 ~~~~ 304 (327)
T 3lxl_A 301 LWSG 304 (327)
T ss_dssp C---
T ss_pred HHhh
Confidence 7653
No 108
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6.5e-38 Score=341.09 Aligned_cols=261 Identities=22% Similarity=0.226 Sum_probs=206.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||+||+|+++.++..||+|++........+.+.+|++++++++||||+++++++. .....
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 81 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFE-----DNTDI 81 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEe-----cCCeE
Confidence 4568999999999999999999999999999999997655556678999999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~D 833 (997)
++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~D 152 (277)
T 3f3z_A 82 YLVMELCTGGELFERVVHKR------VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLID 152 (277)
T ss_dssp EEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeccCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEe
Confidence 99999999999999998754 478999999999999999999999 99999999999999 8889999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+...... .......||+.|+|||++. +.++.++||||+||++|||++|+.||...
T Consensus 153 fg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~-------------~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 210 (277)
T 3f3z_A 153 FGLAARFKPG---------KMMRTKVGTPYYVSPQVLE-------------GLYGPECDEWSAGVMMYVLLCGYPPFSAP 210 (277)
T ss_dssp CTTCEECCTT---------SCBCCCCSCTTTCCHHHHT-------------TCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred cccceeccCc---------cchhccCCCCCccChHHhc-------------ccCCchhhehhHHHHHHHHHHCCCCCCCC
Confidence 9999765221 1223456899999998764 34788999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA--KLCAARQT 991 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L~~~~~~ 991 (997)
.. .+...... ... ... .......+++++.+++.+||+.||++|||+.|+++ .+++....
T Consensus 211 ~~-----~~~~~~~~-----~~~-~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~~ 271 (277)
T 3f3z_A 211 TD-----SEVMLKIR-----EGT-FTF--------PEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSS 271 (277)
T ss_dssp SH-----HHHHHHHH-----HCC-CCC--------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHCC
T ss_pred CH-----HHHHHHHH-----hCC-CCC--------CchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhccccc
Confidence 21 11111100 000 000 00001123567889999999999999999999986 34444443
Q ss_pred h
Q 001908 992 L 992 (997)
Q Consensus 992 ~ 992 (997)
-
T Consensus 272 ~ 272 (277)
T 3f3z_A 272 S 272 (277)
T ss_dssp S
T ss_pred c
Confidence 3
No 109
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=6.7e-38 Score=351.29 Aligned_cols=248 Identities=21% Similarity=0.326 Sum_probs=196.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||.||+|+.+.+++.||+|+++.. .....+.+.+|+++++++ +||||+++++++ ...+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~~~ 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF-----QTES 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE-----EeCC
Confidence 5799999999999999999999999999999999743 334456788999999988 899999999985 4466
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++++||+||
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DF 154 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQR------KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDY 154 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCG
T ss_pred EEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEec
Confidence 8999999999999999998754 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 155 G~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 214 (345)
T 3a8x_A 155 GMCKEGLR--------PGDTTSTFCGTPNYIAPEILR------------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVG 214 (345)
T ss_dssp GGCBCSCC--------TTCCBCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTTT
T ss_pred cccccccC--------CCCcccccCCCccccCccccC------------CCCCChHHhHHHHHHHHHHHHhCCCCcCCcc
Confidence 99975321 112234468999999997664 4678999999999999999999999997432
Q ss_pred CCC----ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 915 QGG----LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 915 ~~~----~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
... ............. ...+ +.....++.+++.+||..||++||++
T Consensus 215 ~~~~~~~~~~~~~~~~i~~~------~~~~------------p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 215 SSDNPDQNTEDYLFQVILEK------QIRI------------PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp C-------CHHHHHHHHHHC------CCCC------------CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred cccccccccHHHHHHHHHcC------CCCC------------CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 111 0111111100000 0000 11224567899999999999999996
No 110
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=9.5e-38 Score=349.23 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=200.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc------
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF------ 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~------ 750 (997)
.++|++.+.||+|+||.||+|+++.+++.||||+++.. .....+.+.+|++++++++||||+++++++.....
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 46899999999999999999999999999999999743 33456789999999999999999999998754321
Q ss_pred ----------------------------------------------CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCC
Q 001908 751 ----------------------------------------------KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDL 784 (997)
Q Consensus 751 ----------------------------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~ 784 (997)
......++||||+++|+|.+++...... ...
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~---~~~ 161 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSL---EDR 161 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSG---GGS
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCc---cch
Confidence 1123489999999999999999876532 235
Q ss_pred CHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCcc----ccccccccccc
Q 001908 785 SLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSM----ETQSSSIGIKG 860 (997)
Q Consensus 785 ~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~----~~~~~~~~~~g 860 (997)
++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+........... ..........|
T Consensus 162 ~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~g 238 (332)
T 3qd2_B 162 EHGVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVG 238 (332)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-
T ss_pred hhHHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCC
Confidence 6778899999999999999999 9999999999999999999999999999876332111100 00122344579
Q ss_pred cccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCccc
Q 001908 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSL 940 (997)
Q Consensus 861 t~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 940 (997)
|+.|+|||.+. +..++.++||||+||++|||++|..|+... .+... ......
T Consensus 239 t~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~~~~~~~~~-------~~~~~-----~~~~~~---- 290 (332)
T 3qd2_B 239 TKLYMSPEQIH------------GNNYSHKVDIFSLGLILFELLYSFSTQMER-------VRIIT-----DVRNLK---- 290 (332)
T ss_dssp CGGGSCHHHHH------------CCCCCTHHHHHHHHHHHHHHHSCCCCHHHH-------HHHHH-----HHHTTC----
T ss_pred CcCccChHHhc------------CCCCcchhhHHHHHHHHHHHHHcCCChhHH-------HHHHH-----HhhccC----
Confidence 99999997664 467899999999999999999987774310 01000 000000
Q ss_pred ccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 941 LLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 941 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.........+++.+++.+||+.||++|||+.|+++
T Consensus 291 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 291 --------FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp --------CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHH
T ss_pred --------CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhh
Confidence 01122344566789999999999999999999986
No 111
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=2.4e-38 Score=345.27 Aligned_cols=261 Identities=21% Similarity=0.322 Sum_probs=197.1
Q ss_pred HhhcCccCCcccccCcceEEEEEECCC---CcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGEN---GTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
..++|++.+.||+|+||.||+|++..+ +..||+|+++.. .....+.+.+|+.++++++||||+++++++.
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 346899999999999999999998643 457999998743 3445678899999999999999999999853
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 158 (281)
T 1mp8_A 87 ENPVWIIMELCTLGELRSFLQVRKY-----SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLG 158 (281)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHTTT-----TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEEC
T ss_pred cCccEEEEecCCCCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEEC
Confidence 3467999999999999999986541 478999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 911 (997)
|||+|+...... ........+|+.|+|||++. +..++.++|||||||++|||++ |..||.
T Consensus 159 Dfg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~ell~~g~~pf~ 219 (281)
T 1mp8_A 159 DFGLSRYMEDST-------YYKASKGKLPIKWMAPESIN------------FRRFTSASDVWMFGVCMWEILMHGVKPFQ 219 (281)
T ss_dssp C--------------------------CCGGGCCHHHHH------------HCCCSHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred ccccccccCccc-------ccccccCCCcccccChhhcc------------cCCCCCccCchHHHHHHHHHHhcCCCCCC
Confidence 999998653211 11122345678999997765 3568899999999999999997 999987
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..... ......... ..+ +.+..++.++.+++.+||+.||++|||+.|+++.|+++.++
T Consensus 220 ~~~~~--~~~~~i~~~--------~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 277 (281)
T 1mp8_A 220 GVKNN--DVIGRIENG--------ERL------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEE 277 (281)
T ss_dssp TCCGG--GHHHHHHTT--------CCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCCHH--HHHHHHHcC--------CCC------------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 43221 111111100 000 01113356788999999999999999999999999998875
Q ss_pred h
Q 001908 992 L 992 (997)
Q Consensus 992 ~ 992 (997)
.
T Consensus 278 ~ 278 (281)
T 1mp8_A 278 E 278 (281)
T ss_dssp H
T ss_pred h
Confidence 4
No 112
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-37 Score=339.74 Aligned_cols=255 Identities=26% Similarity=0.434 Sum_probs=200.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchh-------hHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG-------ALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||+||+|++..+++.||+|++...... ..+.+.+|++++++++||||+++++++..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 94 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN--- 94 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT---
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC---
Confidence 36799999999999999999999999999999998633221 12678999999999999999999998633
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeCCCCc
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~~~~~ 828 (997)
. .++||||+++|+|.+++..... .+++..++.++.|++.|++|||++ + |+||||||+||+++.++.
T Consensus 95 --~--~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~ 162 (287)
T 4f0f_A 95 --P--PRMVMEFVPCGDLYHRLLDKAH-----PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDE 162 (287)
T ss_dssp --T--TEEEEECCTTCBHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCT
T ss_pred --C--CeEEEEecCCCCHHHHHhcccC-----CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCC
Confidence 2 2699999999999999876542 489999999999999999999999 7 999999999999988876
Q ss_pred -----EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHH
Q 001908 829 -----AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEM 903 (997)
Q Consensus 829 -----~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~el 903 (997)
+||+|||+|+... .......||+.|+|||++.. ....++.++||||+||++|||
T Consensus 163 ~~~~~~kl~Dfg~~~~~~-----------~~~~~~~g~~~y~aPE~~~~----------~~~~~~~~~Di~slG~~l~~l 221 (287)
T 4f0f_A 163 NAPVCAKVADFGLSQQSV-----------HSVSGLLGNFQWMAPETIGA----------EEESYTEKADTYSFAMILYTI 221 (287)
T ss_dssp TCSCCEEECCCTTCBCCS-----------SCEECCCCCCTTSCGGGSSC----------SSCEECHHHHHHHHHHHHHHH
T ss_pred CCceeEEeCCCCcccccc-----------ccccccCCCccccCchhhcc----------CCCCcCchhhHHHHHHHHHHH
Confidence 9999999997431 12234578999999976631 234578899999999999999
Q ss_pred HhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 904 FTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 904 ltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
++|+.||................ ....+.. +..+++++.+++.+||+.||++|||+.|+++
T Consensus 222 ~~g~~pf~~~~~~~~~~~~~~~~-------~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 282 (287)
T 4f0f_A 222 LTGEGPFDEYSYGKIKFINMIRE-------EGLRPTI------------PEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 282 (287)
T ss_dssp HHSSCTTTTCCCCHHHHHHHHHH-------SCCCCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HcCCCCCccccccHHHHHHHHhc-------cCCCCCC------------CcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 99999997543221111111100 0011111 1123567889999999999999999999999
Q ss_pred HHHH
Q 001908 984 KLCA 987 (997)
Q Consensus 984 ~L~~ 987 (997)
.|++
T Consensus 283 ~L~~ 286 (287)
T 4f0f_A 283 ELSE 286 (287)
T ss_dssp HHHT
T ss_pred HHHh
Confidence 9975
No 113
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.9e-37 Score=339.88 Aligned_cols=252 Identities=26% Similarity=0.361 Sum_probs=200.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+.|.+.+.||+|+||+||+|.+..++..||+|++... .....+.+.+|++++++++||||+++++++... ..+....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~ 104 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST-VKGKKCI 104 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE-SSSCEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc-cCCCceE
Confidence 4578888999999999999999999999999998643 344567889999999999999999999987543 2345678
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeC-CCCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLD-HDMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~-~~~~~kl~D 833 (997)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ + |+||||||+||+++ .++.+||+|
T Consensus 105 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~D 175 (290)
T 1t4h_A 105 VLVTELMTSGTLKTYLKRFK------VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECC
T ss_pred EEEEEecCCCCHHHHHHHcc------CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEee
Confidence 99999999999999998754 478899999999999999999998 7 99999999999998 889999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||++..... .......||+.|+|||++. +.++.++||||+||++|+|++|+.||...
T Consensus 176 fg~~~~~~~----------~~~~~~~~t~~y~aPE~~~-------------~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 232 (290)
T 1t4h_A 176 LGLATLKRA----------SFAKAVIGTPEFMAPEMYE-------------EKYDESVDVYAFGMCMLEMATSEYPYSEC 232 (290)
T ss_dssp TTGGGGCCT----------TSBEESCSSCCCCCGGGGG-------------TCCCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred CCCcccccc----------cccccccCCcCcCCHHHHh-------------ccCCCcchHHHHHHHHHHHHhCCCCCCCc
Confidence 999975421 1223456899999998663 35888999999999999999999998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ............ ..+.. .....++++.+++.+||..||++|||+.|+++
T Consensus 233 ~----~~~~~~~~~~~~-----~~~~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 233 Q----NAAQIYRRVTSG-----VKPAS-----------FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp S----SHHHHHHHHTTT-----CCCGG-----------GGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred C----cHHHHHHHHhcc-----CCccc-----------cCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 2 122221111110 01100 01112346789999999999999999999985
No 114
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.6e-38 Score=374.19 Aligned_cols=258 Identities=25% Similarity=0.443 Sum_probs=207.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||+||+|+++.++..||||+++.... ..+.+.+|++++++++||||++++++|. ..+..+
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~-----~~~~~~ 292 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT-----REPPFY 292 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----SSSSCE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCCcEE
Confidence 4578899999999999999999998899999999975432 3578999999999999999999999964 345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|
T Consensus 293 lv~E~~~~g~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a 365 (495)
T 1opk_A 293 IITEFMTYGNLLDYLRECNR----QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLS 365 (495)
T ss_dssp EEEECCTTCBHHHHHHHSCT----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCE
T ss_pred EEEEccCCCCHHHHHHhcCc----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccc
Confidence 99999999999999987542 2478999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+...... ........+|..|+|||++. +..++.++|||||||++|||+| |..||......
T Consensus 366 ~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~ 426 (495)
T 1opk_A 366 RLMTGDT-------YTAHAGAKFPIKWTAPESLA------------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 426 (495)
T ss_dssp ECCTTCC-------EECCTTCCCCGGGCCHHHHH------------HCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred eeccCCc-------eeecCCCcCCcceeCHhHHh------------cCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH
Confidence 8652211 11222345678999997765 3568899999999999999999 99998743211
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
.+.+.+... .. ...+..++.++.+++.+||+.||++|||+.++++.|+++.
T Consensus 427 --~~~~~~~~~--------~~------------~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 427 --QVYELLEKD--------YR------------MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp --GHHHHHHTT--------CC------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --HHHHHHHcC--------CC------------CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 111111100 00 1112234667889999999999999999999999998753
No 115
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=5e-38 Score=345.94 Aligned_cols=267 Identities=23% Similarity=0.436 Sum_probs=204.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCC---cEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENG---TFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.+|++.+.||+|+||+||+|++..++ ..||+|+++.. .....+.+.+|++++++++||||++++++|. ..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~ 100 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL----RSEG 100 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC----CSSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE----cCCC
Confidence 56888999999999999999975333 36899998743 3445678899999999999999999999863 3456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 101 ~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Df 172 (298)
T 3f66_A 101 SPLVVLPYMKHGDLRNFIRNETH-----NPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADF 172 (298)
T ss_dssp CCEEEEECCTTCBHHHHHHCTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSC
T ss_pred ceEEEEeCCCCCCHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcc
Confidence 78999999999999999976432 478899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|.|+....... ..........||+.|+|||.+. +..++.++||||+||++|||++ |.+||...
T Consensus 173 g~a~~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~~~~~~~~~ 236 (298)
T 3f66_A 173 GLARDMYDKEY----YSVHNKTGAKLPVKWMALESLQ------------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDV 236 (298)
T ss_dssp GGGCCCSCGGG----CBC-----CCBCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTS
T ss_pred cccccccccch----hccccccCCCCCccccChHHhc------------CCCCChHHHHHHHHHHHHHHHhCCCCCCccC
Confidence 99986532111 1122233456788999997764 4568899999999999999999 55555533
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
... ......... ..+. .+..++.++.+++.+||+.||++|||++|+++.|+++...+.
T Consensus 237 ~~~--~~~~~~~~~--------~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 237 NTF--DITVYLLQG--------RRLL------------QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp CTT--THHHHHHTT--------CCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred CHH--HHHHHHhcC--------CCCC------------CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 211 111111110 0000 011224568899999999999999999999999999998776
Q ss_pred cc
Q 001908 994 GR 995 (997)
Q Consensus 994 ~~ 995 (997)
++
T Consensus 295 ~~ 296 (298)
T 3f66_A 295 GE 296 (298)
T ss_dssp CS
T ss_pred cC
Confidence 54
No 116
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-37 Score=363.93 Aligned_cols=208 Identities=23% Similarity=0.349 Sum_probs=160.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|+++.+++.||||++... .....+.+.+|++++++++||||+++++++...++.....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 36899999999999999999999999999999998642 3345578899999999999999999999986655556678
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+ +|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||
T Consensus 132 ~~lv~e~~-~~~L~~~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRTPV------YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEEECCC-SEEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecc-ccchhhhcccCC------CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 99999998 679999998654 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCc-------------------cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 836 LARFLFARPFDTS-------------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 836 ~a~~~~~~~~~~~-------------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
+|+.......... ..........+||+.|+|||++. .+..++.++|||||
T Consensus 202 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~-----------~~~~~~~~~DiwSl 270 (458)
T 3rp9_A 202 LARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELIL-----------LQENYTEAIDVWSI 270 (458)
T ss_dssp TCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHT-----------TCCCCCTHHHHHHH
T ss_pred cchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhh-----------CCCCCCcHhHHHHH
Confidence 9987632211100 00012234567899999997653 24568999999999
Q ss_pred HHHHHHHHhC
Q 001908 897 GVMLLEMFTR 906 (997)
Q Consensus 897 Gvvl~elltg 906 (997)
||++|||++|
T Consensus 271 G~il~elltg 280 (458)
T 3rp9_A 271 GCIFAELLNM 280 (458)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHHh
Confidence 9999999993
No 117
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.5e-38 Score=345.46 Aligned_cols=265 Identities=28% Similarity=0.439 Sum_probs=195.0
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..++|++.++||+|+||+||+|++.. .||+|+++.. .....+.+.+|++++++++||||+++++++. ..
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~------~~ 92 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST------AP 92 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC------SS
T ss_pred CccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc------CC
Confidence 34689999999999999999998742 5999999743 3445678899999999999999999999742 34
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 93 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Df 164 (289)
T 3og7_A 93 QLAIVTQWCEGSSLYHHLHASE-----TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDF 164 (289)
T ss_dssp SCEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCC
T ss_pred ccEEEEEecCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccc
Confidence 5899999999999999997654 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++...... .........||+.|+|||++.. ..+..++.++||||+||++|||++|+.||....
T Consensus 165 g~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~ 229 (289)
T 3og7_A 165 GLATEKSRWS------GSHQFEQLSGSILWMAPEVIRM---------QDSNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 229 (289)
T ss_dssp C------------------------CCCTTCCHHHHC-------------CCSCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred eecccccccc------ccccccccCCCccccCchhhcc---------cCCCCCCcccchHHHHHHHHHHHHCCCCccccc
Confidence 9997642211 1112234568999999987742 124568889999999999999999999997432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
... .+.+..... ...+.... ....++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 230 ~~~-~~~~~~~~~-------~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 230 NRD-QIIEMVGRG-------SLSPDLSK---------VRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CHH-HHHHHHHHT-------SCCCCTTS---------SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred hHH-HHHHHhccc-------ccCcchhh---------ccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111 111111110 00111000 011235678899999999999999999999999998653
No 118
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=9.2e-38 Score=351.75 Aligned_cols=256 Identities=20% Similarity=0.284 Sum_probs=199.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.+.|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|+++++.++||||+++++++. .
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~ 97 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYS-----S 97 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----E
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEE-----e
Confidence 467999999999999999999999999999999986321 113577899999999999999999999954 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc---E
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---A 829 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~---~ 829 (997)
.+..++||||+++|+|.+++.+.... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.++. +
T Consensus 98 ~~~~~lv~e~~~g~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~v 172 (351)
T 3c0i_A 98 DGMLYMVFEFMDGADLCFEIVKRADA--GFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPV 172 (351)
T ss_dssp TTEEEEEEECCSSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCE
T ss_pred CCEEEEEEeCCCCCCHHHHHHHhccc--CCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcE
Confidence 56899999999999999888754311 12478999999999999999999999 9999999999999987654 9
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+++..... ........||+.|+|||++. +..++.++||||+||++|||++|+.|
T Consensus 173 kl~Dfg~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~~ll~g~~p 232 (351)
T 3c0i_A 173 KLGGFGVAIQLGES--------GLVAGGRVGTPHFMAPEVVK------------REPYGKPVDVWGCGVILFILLSGCLP 232 (351)
T ss_dssp EECCCTTCEECCTT--------SCBCCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEecCcceeEecCC--------CeeecCCcCCcCccCHHHHc------------CCCCCchHhhHHHHHHHHHHHHCCCC
Confidence 99999999865221 11223457999999997664 46688999999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|.... .+.......... ..++ ......+.++.+++.+||..||++|||+.|+++
T Consensus 233 f~~~~------~~~~~~i~~~~~--~~~~------------~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 233 FYGTK------ERLFEGIIKGKY--KMNP------------RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp SCSSH------HHHHHHHHHTCC--CCCH------------HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCcH------HHHHHHHHcCCC--CCCc------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 97421 111111000000 0000 011123456789999999999999999999975
No 119
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.4e-38 Score=343.45 Aligned_cols=272 Identities=22% Similarity=0.313 Sum_probs=198.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.++||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++||||+++++++. ..+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 76 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH-----SDKKL 76 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----ETTEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEE-----eCCEE
Confidence 4789999999999999999999999999999999743 3334577889999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++ ++.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 77 ~lv~e~~~~-~l~~~~~~~~~-----~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~ 147 (292)
T 3o0g_A 77 TLVFEFCDQ-DLKKYFDSCNG-----DLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGL 147 (292)
T ss_dssp EEEEECCSE-EHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCC-CHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeccc
Confidence 999999965 67666665431 488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|..||......
T Consensus 148 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~ 208 (292)
T 3o0g_A 148 ARAFGIP--------VRCYSAEVVTLWYRPPDVLFG-----------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 208 (292)
T ss_dssp CEECCSC--------CSCCCSCCSCGGGCCHHHHTT-----------CSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSH
T ss_pred ceecCCc--------cccccCCccccCCcChHHHcC-----------CCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCH
Confidence 9765211 112234578999999977642 233789999999999999999988886432221
Q ss_pred CccHHHHHHhhc-c--hhhhhh---cCccccccc-ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMAL-P--EKVMET---VDPSLLLAW-SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~-~--~~~~~~---~d~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...+........ + ..+... .+..-.... ..............++.+++.+|++.||++|||++|+++
T Consensus 209 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 209 DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 111111111110 0 000000 000000000 000000111123456789999999999999999999975
No 120
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6e-38 Score=343.45 Aligned_cols=269 Identities=22% Similarity=0.348 Sum_probs=195.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||+||+|++ .+++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 75 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIH-----TKKRL 75 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEE-----CSSCE
T ss_pred ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEc-----cCCeE
Confidence 4788999999999999999999 478999999996432 223467889999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++ +|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 146 (288)
T 1ob3_A 76 VLVFEHLDQ-DLKKLLDVCEG-----GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGL 146 (288)
T ss_dssp EEEEECCSE-EHHHHHHTSTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTH
T ss_pred EEEEEecCC-CHHHHHHhccc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECcc
Confidence 999999965 99999986532 378899999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 147 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~ 207 (288)
T 1ob3_A 147 ARAFGIP--------VRKYTHEIVTLWYRAPDVLMG-----------SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEA 207 (288)
T ss_dssp HHHHCC-----------------CCCTTCCHHHHTT-----------CCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ccccCcc--------ccccccccccccccCchheeC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9875221 112233568999999987642 245789999999999999999999999743211
Q ss_pred CccHHHHHHhhc-c--hhhhh-----hcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMAL-P--EKVME-----TVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~-~--~~~~~-----~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. .+........ + ..+.. ..++.... +............+.++.+++.+||+.||++|||++|+++
T Consensus 208 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 208 D-QLMRIFRILGTPNSKNWPNVTELPKYDPNFTV-YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp H-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCC-CCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHHHHCCCChhhchhhhccccccccccc-ccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 1 1111111100 0 00000 00111000 0000000111123456789999999999999999999875
No 121
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=4.9e-38 Score=348.59 Aligned_cols=272 Identities=22% Similarity=0.345 Sum_probs=211.8
Q ss_pred HhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLMQ-KGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
..++|++.+.||+|+||.||+|++ ..+++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~--- 97 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT--- 97 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe---
Confidence 346899999999999999999985 4567899999997443 34557889999999999 8999999999954
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCC------------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQ------------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
..+..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+|||||
T Consensus 98 --~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlk 172 (313)
T 1t46_A 98 --IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLA 172 (313)
T ss_dssp --SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCS
T ss_pred --cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCc
Confidence 455789999999999999999876421 1122489999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 818 ~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
|+||+++.++.+||+|||+++...... .........||+.|+|||.+. +..++.++||||||
T Consensus 173 p~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG 234 (313)
T 1t46_A 173 ARNILLTHGRITKICDFGLARDIKNDS------NYVVKGNARLPVKWMAPESIF------------NCVYTFESDVWSYG 234 (313)
T ss_dssp GGGEEEETTTEEEECCCGGGSCTTSCT------TSEECSSSEECGGGCCHHHHH------------HCCCCHHHHHHHHH
T ss_pred cceEEEcCCCCEEEccccccccccccc------cceeccCCCCcceeeChHHhc------------CCCCChHHHHHHHH
Confidence 999999999999999999998653221 111223345788999997664 35688999999999
Q ss_pred HHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 898 VMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 898 vvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
|++|||+| |+.||....... ......... ..+.. +..++.++.+++.+||..||++||
T Consensus 235 ~il~ellt~g~~p~~~~~~~~-~~~~~~~~~--------~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rp 293 (313)
T 1t46_A 235 IFLWELFSLGSSPYPGMPVDS-KFYKMIKEG--------FRMLS------------PEHAPAEMYDIMKTCWDADPLKRP 293 (313)
T ss_dssp HHHHHHHTTTCCSSTTCCSSH-HHHHHHHHT--------CCCCC------------CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHhCCCCCCCcccchh-HHHHHhccC--------CCCCC------------cccCCHHHHHHHHHHcCCCchhCc
Confidence 99999999 999987543221 111111110 11000 112345688999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhcc
Q 001908 977 EMRDVLAKLCAARQTLVGR 995 (997)
Q Consensus 977 s~~evl~~L~~~~~~~~~~ 995 (997)
|+.|+++.|+++.++....
T Consensus 294 s~~ell~~L~~~~~~~~~~ 312 (313)
T 1t46_A 294 TFKQIVQLIEKQISESTNH 312 (313)
T ss_dssp CHHHHHHHHHHHHHHTCC-
T ss_pred CHHHHHHHHHHHHHHhhcC
Confidence 9999999999998876543
No 122
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=8.9e-38 Score=338.83 Aligned_cols=253 Identities=26% Similarity=0.405 Sum_probs=189.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||+||+|++ .++.||||+++... ....+.+.+|+++++.++||||+++++++. ..+
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 79 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW--IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCL-----KEP 79 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE--TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEC-----CC-
T ss_pred hheeeeeeeccCCCeEEEEEEE--cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe-----cCC
Confidence 5789999999999999999998 58899999986432 223567899999999999999999999954 455
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC--------C
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH--------D 826 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~--------~ 826 (997)
..++||||+++++|.+++... .+++..++.++.|++.|++|||++...+|+||||||+||+++. +
T Consensus 80 ~~~lv~e~~~~~~L~~~~~~~-------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~ 152 (271)
T 3dtc_A 80 NLCLVMEFARGGPLNRVLSGK-------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSN 152 (271)
T ss_dssp -CEEEEECCTTEEHHHHHTSS-------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSS
T ss_pred ceEEEEEcCCCCCHHHHhhcC-------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccC
Confidence 789999999999999999654 3889999999999999999999992222999999999999986 7
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
+.+||+|||.++..... ......||+.|+|||.+. +..++.++||||+|+++|||++|
T Consensus 153 ~~~kl~Dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~l~~g 210 (271)
T 3dtc_A 153 KILKITDFGLAREWHRT----------TKMSAAGAYAWMAPEVIR------------ASMFSKGSDVWSYGVLLWELLTG 210 (271)
T ss_dssp CCEEECCCCC-----------------------CCGGGSCHHHHH------------HCCCSHHHHHHHHHHHHHHHHHC
T ss_pred cceEEccCCcccccccc----------cccCCCCccceeCHHHhc------------cCCCCchhhHHHHHHHHHHHHhC
Confidence 88999999999765221 122356899999997764 45688999999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
+.||..... .......... ..... .+..++..+.+++.+||+.||++|||+.|+++.|+
T Consensus 211 ~~p~~~~~~-----~~~~~~~~~~----~~~~~------------~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~ 269 (271)
T 3dtc_A 211 EVPFRGIDG-----LAVAYGVAMN----KLALP------------IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLT 269 (271)
T ss_dssp CCTTTTSCH-----HHHHHHHHTS----CCCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCCCH-----HHHHHhhhcC----CCCCC------------CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHh
Confidence 999974311 1111110000 00000 11123457889999999999999999999999997
Q ss_pred HH
Q 001908 987 AA 988 (997)
Q Consensus 987 ~~ 988 (997)
++
T Consensus 270 ~l 271 (271)
T 3dtc_A 270 TI 271 (271)
T ss_dssp C-
T ss_pred cC
Confidence 53
No 123
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=5.2e-38 Score=358.94 Aligned_cols=263 Identities=18% Similarity=0.253 Sum_probs=203.8
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
.++....++|++.++||+|+||+||+|+.+.+++.||+|+++... ....+.+.+|+++++.++||||+++++++
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--- 138 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--- 138 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE---
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE---
Confidence 344455689999999999999999999999999999999996421 22334578999999999999999999985
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
.+.+..|+||||+++|+|.++++... +++..++.++.||+.||+|||++ +|+||||||+||+++.+|.
T Consensus 139 --~~~~~~~lV~E~~~gg~L~~~l~~~~-------~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ 206 (410)
T 3v8s_A 139 --QDDRYLYMVMEYMPGGDLVNLMSNYD-------VPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGH 206 (410)
T ss_dssp --ECSSEEEEEECCCTTEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred --EECCEEEEEEeCCCCCcHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCC
Confidence 45668999999999999999998653 78899999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+..... ........+||+.|+|||++.... ....++.++|||||||++|||++|+.
T Consensus 207 ikL~DFG~a~~~~~~-------~~~~~~~~~gt~~Y~APE~l~~~~--------~~~~~~~~~DiwSlGvilyell~G~~ 271 (410)
T 3v8s_A 207 LKLADFGTCMKMNKE-------GMVRCDTAVGTPDYISPEVLKSQG--------GDGYYGRECDWWSVGVFLYEMLVGDT 271 (410)
T ss_dssp EEECCCTTCEECCTT-------SEEECCSCCSCGGGCCHHHHHTTT--------TTCEEETHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeccceeEeeccC-------CcccccCCcCCccccCHHHhhccC--------CCcCCCCcceEecchHHHHHHHhCCC
Confidence 999999999865221 111223467999999998876311 11237889999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC--CCCHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE--RMEMRDVLA 983 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--Rps~~evl~ 983 (997)
||... ...+.......... ....|.. .....++.+++.+|+..+|++ ||++.|+++
T Consensus 272 Pf~~~-----~~~~~~~~i~~~~~-~~~~p~~-------------~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 272 PFYAD-----SLVGTYSKIMNHKN-SLTFPDD-------------NDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp TTCCS-----SHHHHHHHHHTHHH-HCCCCTT-------------CCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred CCCCC-----ChhhHHHHHHhccc-cccCCCc-------------ccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 99742 12222111111100 0000100 012346779999999999998 999999875
No 124
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-37 Score=353.52 Aligned_cols=253 Identities=18% Similarity=0.245 Sum_probs=201.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|..+.+++.||+|++..........+.+|++++++++||||+++++++ ......+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~-----~~~~~~~ 124 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF-----EDKYEMV 124 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE-----ECSSEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE-----EeCCEEE
Confidence 36799999999999999999999999999999999766555567889999999999999999999995 4456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC--CCcEEEcccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH--DMVAHVSDFG 835 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~--~~~~kl~DFg 835 (997)
+||||+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+||+++. ++.+||+|||
T Consensus 125 lv~E~~~gg~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 125 LILEFLSGGELFDRIAAED-----YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp EEEECCCCCBHHHHTTCTT-----CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 9999999999999997653 1478999999999999999999999 9999999999999974 5789999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.... ........||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 197 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~- 254 (387)
T 1kob_A 197 LATKLNP---------DEIVKVTTATAEFAAPEIVD------------REPVGFYTDMWAIGVLGYVLLSGLSPFAGED- 254 (387)
T ss_dssp TCEECCT---------TSCEEEECSSGGGCCHHHHT------------TCCBCHHHHHHHHHHHHHHHHHSCCSSCCSS-
T ss_pred cceecCC---------CcceeeeccCCCccCchhcc------------CCCCCCcccEeeHhHHHHHHHhCCCCCCCCC-
Confidence 9986522 11223357999999997664 4668899999999999999999999997431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.......... ..++.. ....+.++.+++.+||..||++|||+.|+++
T Consensus 255 ----~~~~~~~i~~~~~--~~~~~~------------~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 255 ----DLETLQNVKRCDW--EFDEDA------------FSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ----HHHHHHHHHHCCC--CCCSST------------TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ----HHHHHHHHHhCCC--CCCccc------------cccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 1111111100000 000000 0122456789999999999999999999986
No 125
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.6e-38 Score=350.41 Aligned_cols=274 Identities=26% Similarity=0.378 Sum_probs=208.4
Q ss_pred cCccCCcccccCcceEEEEEEC----CCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILG----ENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.|++.++||+|+||+||++.++ .+++.||||+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 32 ~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~ 108 (318)
T 3lxp_A 32 YLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED---AGAA 108 (318)
T ss_dssp GEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---TTTT
T ss_pred HHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec---CCCc
Confidence 3489999999999999888653 478899999997543 3456788999999999999999999999754 2356
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... +++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~-------~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Df 178 (318)
T 3lxp_A 109 SLQLVMEYVPLGSLRDYLPRHS-------IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDF 178 (318)
T ss_dssp EEEEEECCCTTCBHHHHGGGSC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCG
T ss_pred eEEEEEecccCCcHHHHHhhCC-------CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCc
Confidence 7899999999999999998754 88999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++...... ..........+|..|+|||++. +..++.++||||+||++|||+||+.||....
T Consensus 179 g~a~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~ll~g~~p~~~~~ 241 (318)
T 3lxp_A 179 GLAKAVPEGH-----EYYRVREDGDSPVFWYAPECLK------------EYKFYYASDVWSFGVTLYELLTHCDSSQSPP 241 (318)
T ss_dssp GGCEECCTTC-----SEEEC---CCCCGGGCCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTTCGGGSHH
T ss_pred cccccccccc-----cccccccCCCCCceeeChHHhc------------CCCCCcHHHHHHHHHHHHHHHhCCCcccccc
Confidence 9998763211 1112233456888999997765 3567889999999999999999999986421
Q ss_pred CCCccHHHHHHhhcc----hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 915 QGGLTLHEFCKMALP----EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~----~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
.. .......... ....+.++. ....+.+..++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 242 ~~---~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 242 TK---FLELIGIAQGQMTVLRLTELLER--------GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HH---HHHHHCSCCHHHHHHHHHHHHHT--------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hh---hhhhhcccccchhHHHHHHHHhc--------ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 11 0000000000 000111100 00111122345678999999999999999999999999999988
Q ss_pred Hhhc
Q 001908 991 TLVG 994 (997)
Q Consensus 991 ~~~~ 994 (997)
++.+
T Consensus 311 ~~~~ 314 (318)
T 3lxp_A 311 KYQG 314 (318)
T ss_dssp HHHC
T ss_pred hhcc
Confidence 7654
No 126
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=2e-38 Score=354.94 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=199.5
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCc
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~ 750 (997)
....++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+..|.++++.+ +||||+++++++
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~----- 87 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF----- 87 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE-----
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE-----
Confidence 345578999999999999999999999999999999997432 33456778899999887 899999999984
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.+.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+|
T Consensus 88 ~~~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vk 158 (345)
T 1xjd_A 88 QTKENLFFVMEYLNGGDLMYHIQSCH------KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIK 158 (345)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEE
T ss_pred EeCCEEEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEE
Confidence 45668999999999999999998754 488999999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||
T Consensus 159 L~DFG~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~Pf 218 (345)
T 1xjd_A 159 IADFGMCKENML--------GDAKTNTFCGTPDYIAPEILL------------GQKYNHSVDWWSFGVLLYEMLIGQSPF 218 (345)
T ss_dssp ECCCTTCBCCCC--------TTCCBCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EeEChhhhhccc--------CCCcccCCCCCcccCChhhhc------------CCCCCChhhhHHHHHHHHHHhcCCCCC
Confidence 999999975421 111234568999999997664 467899999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH-HHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMR-DVL 982 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~-evl 982 (997)
.... ..+........ .+... .....++.+++.+||..||++||++. |++
T Consensus 219 ~~~~-----~~~~~~~i~~~------~~~~p------------~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 219 HGQD-----EEELFHSIRMD------NPFYP------------RWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CCSS-----HHHHHHHHHHC------CCCCC------------TTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCCC-----HHHHHHHHHhC------CCCCC------------cccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 7431 22221111000 01110 11234677999999999999999987 554
No 127
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-37 Score=345.69 Aligned_cols=246 Identities=23% Similarity=0.301 Sum_probs=199.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||+||+|+.+.+++.||+|+++... ....+.+.+|+.+++.++||||+++++++ .+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~-----~~~~ 79 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF-----QDAQ 79 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE-----ECSS
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE-----EeCC
Confidence 367999999999999999999999999999999996432 23456788999999999999999999985 4566
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 80 ~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Df 150 (318)
T 1fot_A 80 QIFMIMDYIEGGELFSLLRKSQ------RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDF 150 (318)
T ss_dssp EEEEEECCCCSCBHHHHHHHTS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEeCCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeec
Confidence 8999999999999999998754 478899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... .....+||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 151 g~a~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 207 (318)
T 1fot_A 151 GFAKYVPD-----------VTYTLCGTPDYIAPEVVS------------TKPYNKSIDWWSFGILIYEMLAGYTPFYDSN 207 (318)
T ss_dssp SSCEECSS-----------CBCCCCSCTTTCCHHHHT------------TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred CcceecCC-----------ccccccCCccccCHhHhc------------CCCCCcccchhhhHHHHHHHHhCCCCCCCCC
Confidence 99976421 123457999999997664 4678899999999999999999999997421
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
..+......... ... +.....++.+++.+|+..||++|| ++.|+++
T Consensus 208 -----~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 208 -----TMKTYEKILNAE------LRF------------PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp -----HHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred -----HHHHHHHHHhCC------CCC------------CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111111111000 000 011234677999999999999999 8888864
No 128
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.6e-37 Score=340.09 Aligned_cols=272 Identities=17% Similarity=0.164 Sum_probs=210.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|++..+++.||||++.... ..+.+.+|+++++++ +|+|++++++++. .....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-----~~~~~ 81 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQ-----EGLHN 81 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEE-----ETTEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecC-----CCcee
Confidence 457999999999999999999998899999999986432 234578899999999 7999999999854 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc-----EEE
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-----AHV 831 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~-----~kl 831 (997)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||
T Consensus 82 ~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl 152 (298)
T 1csn_A 82 VLVIDLL-GPSLEDLLDLCGR-----KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYV 152 (298)
T ss_dssp EEEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEE
T ss_pred EEEEEec-CCCHHHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEE
Confidence 9999999 9999999987542 388999999999999999999999 9999999999999988776 999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+.......... ..........||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 153 ~Dfg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~g~~pf~ 219 (298)
T 1csn_A 153 VDFGMVKFYRDPVTKQH-IPYREKKNLSGTARYMSINTHL------------GREQSRRDDLEALGHVFMYFLRGSLPWQ 219 (298)
T ss_dssp CCCTTCEESBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred EECcccccccccccccc-ccccCccCCCCCcccCCchhhc------------CCCCChHHHHHHHHHHHHHHHcCCCCcc
Confidence 99999987643221111 1112234567999999997654 5678999999999999999999999998
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
...... ..+.......... ....+ .....++.++.+++..||+.||++||+++++++.|+++.++
T Consensus 220 ~~~~~~--~~~~~~~~~~~~~-~~~~~------------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~ 284 (298)
T 1csn_A 220 GLKAAT--NKQKYERIGEKKQ-STPLR------------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLER 284 (298)
T ss_dssp SCCSCC--HHHHHHHHHHHHH-HSCHH------------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHH
T ss_pred hhhccc--cHHHHHHHHhhcc-CccHH------------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHh
Confidence 543221 1111111100000 00000 00112356788999999999999999999999999999876
Q ss_pred hh
Q 001908 992 LV 993 (997)
Q Consensus 992 ~~ 993 (997)
..
T Consensus 285 ~~ 286 (298)
T 1csn_A 285 LN 286 (298)
T ss_dssp TT
T ss_pred cC
Confidence 53
No 129
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.3e-37 Score=351.52 Aligned_cols=254 Identities=22% Similarity=0.254 Sum_probs=190.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|+.+.+++.||||++..... ..+.+.+|+.++++++||||+++++++. ..+..+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~~~ 92 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVIL-----TPTHLA 92 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEe-----eCCEEE
Confidence 4689999999999999999999999999999999974332 2366889999999999999999999954 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc--EEEcccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--AHVSDFG 835 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~--~kl~DFg 835 (997)
+||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|||
T Consensus 93 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 93 IIMEYASGGELYERICNAG------RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp EEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred EEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 9999999999999998754 488999999999999999999999 9999999999999987775 9999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCc-cchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASV-TGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~-~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|+.... ........||+.|+|||++. +..++. ++||||+||++|||++|+.||....
T Consensus 164 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~ 222 (361)
T 3uc3_A 164 YSKSSVL---------HSQPKSTVGTPAYIAPEVLL------------RQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222 (361)
T ss_dssp CC------------------------CTTSCHHHHH------------CSSCCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred ccccccc---------cCCCCCCcCCCCcCChhhhc------------CCCCCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence 9974311 11223457999999997765 344544 4899999999999999999997543
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... .............. .. +.......++.+++.+||..||++|||+.|+++.
T Consensus 223 ~~~-~~~~~~~~~~~~~~------~~----------~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 223 EPR-DYRKTIQRILSVKY------SI----------PDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp -CC-CHHHHHHHHHTTCC------CC----------CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred cHH-HHHHHHHHHhcCCC------CC----------CCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 222 22222211111000 00 0000123567799999999999999999999763
No 130
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.2e-37 Score=344.53 Aligned_cols=276 Identities=25% Similarity=0.346 Sum_probs=200.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-----hhhHHHHHHHHHHHhhcC---CCCcceEEeeeecc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-----KGALKSFVAECEVLRNTR---HRNLIKIITVCSSI 748 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~ 748 (997)
..++|++.++||+|+||+||+|++..+++.||||+++... ......+.+|++++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 4678999999999999999999998899999999986322 112346677888777764 99999999998764
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
........++||||++ |+|.+++...... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPP----GLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCC
Confidence 4333446899999996 6999999876522 388999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+.... ........||+.|+|||++. +..++.++||||+||++|||++|+.
T Consensus 159 ~kl~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~~l~~g~~ 217 (308)
T 3g33_A 159 VKLADFGLARIYSY---------QMALTPVVVTLWYRAPEVLL------------QSTYATPVDMWSVGCIFAEMFRRKP 217 (308)
T ss_dssp EEECSCSCTTTSTT---------CCCSGGGGCCCSSCCHHHHH------------TSCCCSTHHHHHHHHHHHHTTTSSC
T ss_pred EEEeeCccccccCC---------CcccCCccccccccCchHHc------------CCCCCchHHHHHHHHHHHHHHhCCC
Confidence 99999999976521 12224467899999997664 4668999999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhh-cc--hhhhhhcCcccccccccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMA-LP--EKVMETVDPSLLLAWSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~-~~--~~~~~~~d~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
||...... ..+....... .+ ..+..... .....+.... ......+...++.+++.+||+.||++|||+.|++
T Consensus 218 pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 295 (308)
T 3g33_A 218 LFCGNSEA-DQLGKIFDLIGLPPEDDWPRDVS-LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRAL 295 (308)
T ss_dssp SCCCSSHH-HHHHHHHHHHCCCCTTTSCSSCS-SCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCHH-HHHHHHHHHhCCCChhhccchhh-ccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHh
Confidence 99743211 1111111110 00 00000000 0000000000 0111123446788999999999999999999997
Q ss_pred H
Q 001908 983 A 983 (997)
Q Consensus 983 ~ 983 (997)
+
T Consensus 296 ~ 296 (308)
T 3g33_A 296 Q 296 (308)
T ss_dssp T
T ss_pred c
Confidence 5
No 131
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-37 Score=344.56 Aligned_cols=246 Identities=22% Similarity=0.227 Sum_probs=191.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.++||+|+||+||+|++..+++.||||++... ..........|+..+.++ +|+||++++++|. ..+
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~-----~~~ 130 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE-----EGG 130 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETT
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEE-----eCC
Confidence 46899999999999999999999989999999998642 233344556666666655 8999999999964 356
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DF 201 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAWGA-----SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDF 201 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCC
T ss_pred EEEEEEecc-CCCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccc
Confidence 899999999 7799999887642 489999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ........||+.|+|||++. +.++.++|||||||++|||++|..|+...
T Consensus 202 G~a~~~~~---------~~~~~~~~gt~~y~aPE~~~-------------~~~~~~~DiwslG~il~el~~g~~~~~~~- 258 (311)
T 3p1a_A 202 GLLVELGT---------AGAGEVQEGDPRYMAPELLQ-------------GSYGTAADVFSLGLTILEVACNMELPHGG- 258 (311)
T ss_dssp TTCEECC---------------CCCCCGGGCCGGGGG-------------TCCSTHHHHHHHHHHHHHHHHTCCCCSSH-
T ss_pred eeeeeccc---------CCCCcccCCCccccCHhHhc-------------CCCCchhhHHHHHHHHHHHHhCCCCCCCc-
Confidence 99876522 11223356999999997653 35889999999999999999997765421
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... ..+ .....++.++.+++.+||+.||++|||+.|+++
T Consensus 259 ---~~~~~~~~~~--------~~~------------~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 259 ---EGWQQLRQGY--------LPP------------EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHHHTTTC--------CCH------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---cHHHHHhccC--------CCc------------ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 1111110000 000 112233567889999999999999999999985
No 132
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.7e-38 Score=370.53 Aligned_cols=258 Identities=24% Similarity=0.427 Sum_probs=205.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||+||+|+++ ++..||||+++... ...+.+.+|++++++++||||+++++++. .+..
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~------~~~~ 257 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT------KEPI 257 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC------SSSC
T ss_pred chHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe------CCcc
Confidence 3468899999999999999999997 57889999997543 34578999999999999999999999863 3468
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.++++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 258 ~lv~e~~~~g~L~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~ 330 (454)
T 1qcf_A 258 YIITEFMAKGSLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGL 330 (454)
T ss_dssp EEEECCCTTCBHHHHHHSHHH----HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTG
T ss_pred EEEEeecCCCcHHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCC
Confidence 999999999999999986431 1378889999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
|+..... .........+|..|+|||++. +..++.++|||||||++|||+| |+.||....
T Consensus 331 a~~~~~~-------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~- 390 (454)
T 1qcf_A 331 ARVIEDN-------EYTAREGAKFPIKWTAPEAIN------------FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS- 390 (454)
T ss_dssp GGGBCCH-------HHHTTCSSSSCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC-
T ss_pred ceEcCCC-------ceeccCCCcccccccCHHHhc------------cCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC-
Confidence 9865211 111122345678999997765 3568999999999999999999 999987431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
..+..... .... +.+.+..++.++.+++.+||+.||++|||+.++++.|+++..
T Consensus 391 ----~~~~~~~i-----~~~~------------~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~ 444 (454)
T 1qcf_A 391 ----NPEVIRAL-----ERGY------------RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444 (454)
T ss_dssp ----HHHHHHHH-----HHTC------------CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSS
T ss_pred ----HHHHHHHH-----HcCC------------CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHh
Confidence 11211111 0000 011122356778999999999999999999999999987654
No 133
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=351.23 Aligned_cols=267 Identities=24% Similarity=0.367 Sum_probs=209.3
Q ss_pred hhcCccCCcccccCcceEEEEEECC-------CCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
.++|.+.++||+|+||+||+|++.. .+..||||+++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~-- 145 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACT-- 145 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeec--
Confidence 4689999999999999999999742 3457999999743 344557889999999999 8999999999954
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCC----------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQ----------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
..+..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+||||||
T Consensus 146 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp 219 (382)
T 3tt0_A 146 ---QDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219 (382)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCG
T ss_pred ---cCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCc
Confidence 455789999999999999999876421 1123489999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++.+||+|||+|+....... ........+|+.|+|||++. +..++.++|||||||
T Consensus 220 ~NIll~~~~~~kL~DFG~a~~~~~~~~------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwslG~ 281 (382)
T 3tt0_A 220 RNVLVTEDNVMKIADFGLARDIHHIDY------YKKTTNGRLPVKWMAPEALF------------DRIYTHQSDVWSFGV 281 (382)
T ss_dssp GGEEECTTCCEEECSCSCCCCSSCCCT------TCCCTTCCCGGGGSCHHHHH------------SCCCCHHHHHHHHHH
T ss_pred ceEEEcCCCcEEEcccCcccccccccc------cccccCCCCCcceeCHHHhc------------CCCCCchhHHHHHHH
Confidence 999999999999999999986532111 11223346788999997664 567899999999999
Q ss_pred HHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 899 MLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 899 vl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
++|||++ |..||... ...+....... ...+.. +..++.++.+++.+||+.||++|||
T Consensus 282 il~ellt~g~~p~~~~-----~~~~~~~~~~~-----~~~~~~------------~~~~~~~l~~li~~~l~~dP~~Rps 339 (382)
T 3tt0_A 282 LLWEIFTLGGSPYPGV-----PVEELFKLLKE-----GHRMDK------------PSNCTNELYMMMRDCWHAVPSQRPT 339 (382)
T ss_dssp HHHHHHTTSCCSSTTC-----CHHHHHHHHHT-----TCCCCC------------CSSCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHHHHhCCCCCCCCC-----CHHHHHHHHHc-----CCCCCC------------CccCCHHHHHHHHHHcCCChhhCcC
Confidence 9999999 99998633 22222111110 001100 1123457889999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 001908 978 MRDVLAKLCAARQTL 992 (997)
Q Consensus 978 ~~evl~~L~~~~~~~ 992 (997)
++|+++.|+++....
T Consensus 340 ~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 340 FKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987643
No 134
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=342.79 Aligned_cols=257 Identities=25% Similarity=0.404 Sum_probs=197.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
++|++.+.||+|+||+||+|++ .++.||||++... ...+.+.+|++++++++||||+++++++. +..++
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-------~~~~l 76 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW--RAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACL-------NPVCL 76 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCT-------TTTEE
T ss_pred hHeeeeeEeecCCCceEEEEEE--CCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEc-------CCcEE
Confidence 5788999999999999999998 4789999998643 34578899999999999999999999853 24799
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc-EEEcccccc
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-AHVSDFGLA 837 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~-~kl~DFg~a 837 (997)
||||+++|+|.+++..... ...+++..++.++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||++
T Consensus 77 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~ 153 (307)
T 2eva_A 77 VMEYAEGGSLYNVLHGAEP---LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA 153 (307)
T ss_dssp EEECCTTCBHHHHHHCSSS---EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-
T ss_pred EEEcCCCCCHHHHHhccCC---CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccc
Confidence 9999999999999987542 224788899999999999999999932228999999999999998886 799999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+.... ......||+.|+|||++. +..++.++|||||||++|||++|+.||......
T Consensus 154 ~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~- 209 (307)
T 2eva_A 154 CDIQT-----------HMTNNKGSAAWMAPEVFE------------GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP- 209 (307)
T ss_dssp ----------------------CCTTSSCHHHHT------------CCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS-
T ss_pred ccccc-----------ccccCCCCCceEChhhhC------------CCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc-
Confidence 75421 112346899999997654 467899999999999999999999999743221
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
......... ....+.. ...++..+.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus 210 --~~~~~~~~~-----~~~~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 265 (307)
T 2eva_A 210 --AFRIMWAVH-----NGTRPPL------------IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYF 265 (307)
T ss_dssp --HHHHHHHHH-----TTCCCCC------------BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGC
T ss_pred --HHHHHHHHh-----cCCCCCc------------ccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhc
Confidence 111111100 0001111 1123456789999999999999999999999999987654
No 135
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.4e-37 Score=339.96 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=195.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|.+.++||+|+||+||+|+.+.++..||+|++.... ....+.+.+|++++++++||||+++++++. .....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~-----~~~~~ 95 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFE-----DYHNM 95 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhee-----cCCeE
Confidence 467999999999999999999999999999999987443 334578899999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~D 833 (997)
++||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 96 ~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~D 170 (285)
T 3is5_A 96 YIVMETCEGGELLERIVSAQAR--GKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIID 170 (285)
T ss_dssp EEEECCCSCCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHhhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEe
Confidence 9999999999999998654210 12488999999999999999999999 99999999999999 5568899999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... ........||+.|+|||++. +.++.++||||+||++|||++|+.||...
T Consensus 171 fg~a~~~~~---------~~~~~~~~~t~~y~aPE~~~-------------~~~~~~~Di~slG~il~~ll~g~~pf~~~ 228 (285)
T 3is5_A 171 FGLAELFKS---------DEHSTNAAGTALYMAPEVFK-------------RDVTFKCDIWSAGVVMYFLLTGCLPFTGT 228 (285)
T ss_dssp CCCCCC-------------------CTTGGGCCHHHHT-------------TCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eecceecCC---------cccCcCcccccCcCChHHhc-------------cCCCcccCeehHHHHHHHHHhCCCCCCCC
Confidence 999976422 11223456899999998763 35788999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+...... ...+..... ....++++.+++.+||..||++|||+.|+++
T Consensus 229 ~-----~~~~~~~~~------~~~~~~~~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 229 S-----LEEVQQKAT------YKEPNYAVE---------CRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp S-----HHHHHHHHH------HCCCCCCC-----------CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred C-----HHHHHhhhc------cCCcccccc---------cCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 222111110 000110000 0012356779999999999999999999975
No 136
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=357.31 Aligned_cols=292 Identities=21% Similarity=0.295 Sum_probs=216.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|.+.++||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++.. ......
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~---~~~~~~ 84 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE---TTTRHK 84 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC---TTTCCE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc---CCCCee
Confidence 357999999999999999999999899999999997433 3345778899999999999999999998753 234578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee----CCCCcEEEc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMVAHVS 832 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll----~~~~~~kl~ 832 (997)
++||||+++|+|.+++...... ..+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+||+
T Consensus 85 ~lv~e~~~~g~L~~~l~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~ 158 (396)
T 4eut_A 85 VLIMEFCPCGSLYTVLEEPSNA---YGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLT 158 (396)
T ss_dssp EEEECCCTTEEHHHHTTSGGGT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEEC
T ss_pred EEEEecCCCCCHHHHHHhhhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEe
Confidence 9999999999999999875421 2388999999999999999999999 99999999999999 888899999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+.... ........||+.|+|||++..... .......++.++|||||||++|||++|+.||..
T Consensus 159 DFG~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~ 225 (396)
T 4eut_A 159 DFGAARELED---------DEQFVSLYGTEEYLHPDMYERAVL----RKDHQKKYGATVDLWSIGVTFYHAATGSLPFRP 225 (396)
T ss_dssp CGGGCEECCC---------GGGSSCSSSCCTTCCHHHHHHHCC------CHHHHHHHHHHHHHHHHHHHHHHHSSCSEEC
T ss_pred cCCCceEccC---------CCccccccCCccccCHHHhhcccc----ccccccCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 9999986521 112234579999999998753210 000013567899999999999999999999975
Q ss_pred CcCCCccHHHHHHhh--cchhhhhhcCcccc--ccccc--chhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMA--LPEKVMETVDPSLL--LAWSD--GRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~--~~~~~--~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
............... .+......+..... ..|.. .............+.+++..||+.||++||+++|+++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~ 305 (396)
T 4eut_A 226 FEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305 (396)
T ss_dssp TTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred CCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHH
Confidence 443332222221111 11110000000000 00100 0011223566778899999999999999999999999998
Q ss_pred HHHHH
Q 001908 987 AARQT 991 (997)
Q Consensus 987 ~~~~~ 991 (997)
++...
T Consensus 306 ~il~~ 310 (396)
T 4eut_A 306 DILHR 310 (396)
T ss_dssp HHHTC
T ss_pred HHhhc
Confidence 87654
No 137
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=349.87 Aligned_cols=252 Identities=23% Similarity=0.289 Sum_probs=185.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..+.|++.+.||+|+||+||+|+++.+++.||||+++... ..+.+.+|++++++++||||+++++++. ..+..
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~~~~ 123 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFE-----TPTEI 123 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEe-----cCCeE
Confidence 3467999999999999999999999899999999997543 3356789999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~D 833 (997)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 124 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~D 194 (349)
T 2w4o_A 124 SLVLELVTGGELFDRIVEKG------YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIAD 194 (349)
T ss_dssp EEEECCCCSCBHHHHHTTCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEcc
Confidence 99999999999999998654 478999999999999999999999 9999999999999975 89999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 195 fg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~pf~~~ 253 (349)
T 2w4o_A 195 FGLSKIVEH---------QVLMKTVCGTPGYCAPEILR------------GCAYGPEVDMWSVGIITYILLCGFEPFYDE 253 (349)
T ss_dssp CC-------------------------CGGGSCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSCTTCCT
T ss_pred CccccccCc---------ccccccccCCCCccCHHHhc------------CCCCCcccchHHHHHHHHHHHhCCCCCCCC
Confidence 999986522 11223457899999997654 567899999999999999999999998643
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
... ........... .....+ ...+.+.++.+++.+||..||++|||+.|+++
T Consensus 254 ~~~----~~~~~~i~~~~-~~~~~~-------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 254 RGD----QFMFRRILNCE-YYFISP-------------WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp TCH----HHHHHHHHTTC-CCCCTT-------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccc----HHHHHHHHhCC-CccCCc-------------hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 211 11111110000 000000 00123456789999999999999999999975
No 138
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.6e-37 Score=355.39 Aligned_cols=282 Identities=16% Similarity=0.196 Sum_probs=204.5
Q ss_pred hhcCccCCccccc--CcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQG--SFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G--~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.++||+| +||+||+|+++.+++.||||+++.. .....+.+.+|++++++++||||+++++++. ..
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~-----~~ 98 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI-----AD 98 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ET
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE-----EC
Confidence 4689999999999 9999999999999999999999743 2445678889999999999999999999964 35
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~d 171 (389)
T 3gni_B 99 NELWVVTSFMAYGSAKDLICTHFMD----GMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSG 171 (389)
T ss_dssp TEEEEEEECCTTCBHHHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECC
T ss_pred CEEEEEEEccCCCCHHHHHhhhccc----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcc
Confidence 5899999999999999999875322 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+........... ..........||+.|+|||++... ...++.++||||+||++|||++|+.||...
T Consensus 172 fg~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~ 240 (389)
T 3gni_B 172 LRSNLSMISHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQN----------LQGYDAKSDIYSVGITACELANGHVPFKDM 240 (389)
T ss_dssp GGGCEECEETTEECS-CBCCCCTTCTTTGGGSCHHHHSTT----------SSCBCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccceeecccccccc-ccccccccccccccccCHHHHhcc----------CCCCCcHhHHHHHHHHHHHHHHCCCCCCCC
Confidence 999876533211110 111222335789999999876421 146889999999999999999999999754
Q ss_pred cCCCccHHHHHHhhcch----------hhhh-----h----cCccccc-----ccccchhhhhHHHHHHHHHHHHhhcCC
Q 001908 914 FQGGLTLHEFCKMALPE----------KVME-----T----VDPSLLL-----AWSDGRRRAKVEECLVTVIRIGVACSM 969 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~----------~~~~-----~----~d~~~~~-----~~~~~~~~~~~~~~~~~l~~li~~cl~ 969 (997)
.......... ....+. .... . ....... ........+....+.+++.+++.+||+
T Consensus 241 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~ 319 (389)
T 3gni_B 241 PATQMLLEKL-NGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQ 319 (389)
T ss_dssp CSTTHHHHC---------------------------------------------------------CCHHHHHHHHHHTC
T ss_pred CHHHHHHHHh-cCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhh
Confidence 3322111110 000000 0000 0 0000000 000000111223445678999999999
Q ss_pred CCCCCCCCHHHHHH
Q 001908 970 ESPIERMEMRDVLA 983 (997)
Q Consensus 970 ~dP~~Rps~~evl~ 983 (997)
.||++|||+.|+++
T Consensus 320 ~dP~~Rpta~ell~ 333 (389)
T 3gni_B 320 RNPDARPSASTLLN 333 (389)
T ss_dssp SCTTTSCCHHHHTT
T ss_pred cCcccCCCHHHHhc
Confidence 99999999999975
No 139
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=6e-38 Score=352.18 Aligned_cols=245 Identities=22% Similarity=0.285 Sum_probs=199.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|+++.+++.||||+++.. .....+.+.+|++++++++||||+++++++ .+.+.
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~-----~~~~~ 115 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF-----KDNSN 115 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECSSE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE-----EcCCE
Confidence 6899999999999999999999999999999999643 223456788999999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 116 LYMVMEYVAGGEMFSHLRRIG------RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp EEEEEECCTTCBHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEEcCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccc
Confidence 999999999999999998754 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+.... .....+||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 187 ~a~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~Pf~~~-- 241 (350)
T 1rdq_E 187 FAKRVKG-----------RTWTLCGTPEALAPEIIL------------SKGYNKAVDWWALGVLIYEMAAGYPPFFAD-- 241 (350)
T ss_dssp TCEECSS-----------CBCCCEECGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCS--
T ss_pred cceeccC-----------CcccccCCccccCHHHhc------------CCCCCCcCCEecccHhHhHHhhCCCCCCCC--
Confidence 9986521 123457999999997664 467899999999999999999999999742
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
...+......... ... +..+..++.+++.+||..||++||+ ++|+++
T Consensus 242 ---~~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 242 ---QPIQIYEKIVSGK------VRF------------PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---SHHHHHHHHHHCC------CCC------------CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CHHHHHHHHHcCC------CCC------------CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1122111111000 000 0122456789999999999999998 777764
No 140
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-37 Score=374.35 Aligned_cols=174 Identities=21% Similarity=0.249 Sum_probs=127.3
Q ss_pred CCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecc
Q 001908 419 LMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYI 498 (997)
Q Consensus 419 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 498 (997)
+|+.|++++|.++.. |..+ .++|+.|+|++|.+++ +..+..+++| +.|+|++|.+++..|..|+.+++|+.|+|
T Consensus 212 ~L~~L~ls~n~l~~~-~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 285 (597)
T 3oja_B 212 AVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTD--TAWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYI 285 (597)
T ss_dssp TCSEEECCSSCCCEE-ECSC--CSCCCEEECCSSCCCC--CGGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred hhheeeccCCccccc-cccc--CCCCCEEECCCCCCCC--ChhhccCCCC-CEEECCCCccCCCCHHHhcCccCCCEEEC
Confidence 445555555554422 2211 1456666666666654 2455566666 66777777777677778888888889999
Q ss_pred ccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 499 SGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 499 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
++|++++ +|..+..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++. | +..+++|+.|+|++|+|+|.
T Consensus 286 s~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 286 SNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp TTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCCh
Confidence 9998884 6777788899999999999998 6888889999999999999999864 3 67788999999999999987
Q ss_pred CCCCCcCCCCcceeecCCCCcCCCCC
Q 001908 579 VPTKGVFSNKTRVQLTGNGKLCGGSN 604 (997)
Q Consensus 579 ~p~~~~~~~~~~~~~~~N~~~C~~~~ 604 (997)
.+. ..+..+....+.+|+..|+...
T Consensus 361 ~~~-~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 361 SLR-ALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp HHH-HHTTTCCTTTBCCCCCCCCTTC
T ss_pred hHH-HHHHHHhhhccccccccCCcch
Confidence 543 3456666677889999998644
No 141
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-37 Score=348.71 Aligned_cols=249 Identities=25% Similarity=0.341 Sum_probs=197.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+.|+..+.||+|+||+||+|+...+++.||||++... .....+.+.+|++++++++||||+++++++.. .+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 128 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-----EHT 128 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-----CCe
Confidence 5688999999999999999999889999999999643 23345678999999999999999999999643 458
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ |++.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 129 ~~lv~e~~~-g~l~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 129 AWLVMEYCL-GSASDLLEVHK-----KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp EEEEEECCS-EEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred EEEEEecCC-CCHHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 999999996 68888886543 1488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... .....||+.|+|||++... .+..++.++|||||||++|||++|+.||....
T Consensus 200 ~a~~~~~------------~~~~~gt~~y~aPE~~~~~---------~~~~~~~~~DiwslG~il~ell~g~~p~~~~~- 257 (348)
T 1u5q_A 200 SASIMAP------------ANSFVGTPYWMAPEVILAM---------DEGQYDGKVDVWSLGITCIELAERKPPLFNMN- 257 (348)
T ss_dssp TCBSSSS------------BCCCCSCGGGCCHHHHHTT---------SSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-
T ss_pred CceecCC------------CCcccCCcceeCHhhhccc---------cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC-
Confidence 9975411 1235799999999877421 24568899999999999999999999986431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... ... .....+... ...++..+.+++.+||+.||++|||+.|+++
T Consensus 258 ---~~~~~-~~~-----~~~~~~~~~-----------~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 258 ---AMSAL-YHI-----AQNESPALQ-----------SGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp ---HHHHH-HHH-----HHSCCCCCC-----------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---hHHHH-HHH-----HhcCCCCCC-----------CCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence 11111 110 011111110 0112456789999999999999999999975
No 142
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.4e-38 Score=345.91 Aligned_cols=266 Identities=21% Similarity=0.340 Sum_probs=196.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .......+.+|++++++++||||+++++++.... ....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~~ 89 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET-PAGP 89 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-TTEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-CCCc
Confidence 46899999999999999999999889999999999743 2334567899999999999999999999875432 1223
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~lv~e~~~g~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Df 160 (311)
T 3ork_A 90 LPYIVMEYVDGVTLRDIVHTEG------PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDF 160 (311)
T ss_dssp EEEEEEECCCEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCC
T ss_pred ccEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeec
Confidence 4699999999999999998754 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++...... ..........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 161 g~a~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~ 223 (311)
T 3ork_A 161 GIARAIADSG-----NSVTQTAAVIGTAQYLSPEQAR------------GDSVDARSDVYSLGCVLYEVLTGEPPFTGDS 223 (311)
T ss_dssp SCC-----------------------CCTTCCHHHHH------------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cCcccccccc-----cccccccccCcCcccCCHHHhc------------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9998653211 1112223456899999997664 4678999999999999999999999997431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH-HHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL-AKLCAAR 989 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl-~~L~~~~ 989 (997)
..+......... ...+. .....++.++.+++.+||+.||++||++.+++ +.+.++.
T Consensus 224 -----~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 280 (311)
T 3ork_A 224 -----PVSVAYQHVRED---PIPPS-----------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280 (311)
T ss_dssp -----HHHHHHHHHHCC---CCCHH-----------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----hHHHHHHHhcCC---CCCcc-----------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHh
Confidence 111111110000 00000 00112355788999999999999999665554 4555443
No 143
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=5.5e-37 Score=344.73 Aligned_cols=286 Identities=23% Similarity=0.320 Sum_probs=215.4
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhh--cCCCCcceEEeeeecc
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKIITVCSSI 748 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~ 748 (997)
...-....++|++.+.||+|+||.||+|++ +++.||||++... ..+.+.+|+++++. ++||||+++++++...
T Consensus 34 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~ 108 (342)
T 1b6c_B 34 LLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKD 108 (342)
T ss_dssp HHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC
T ss_pred eeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc
Confidence 333455668999999999999999999998 5899999998643 23567889999887 7899999999997542
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcEecCCCCCC
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH--------HHCQPPIVHGDLKPSN 820 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~N 820 (997)
. ......++||||+++|+|.+++.+.. +++..++.++.|++.||+||| +. +|+||||||+|
T Consensus 109 ~-~~~~~~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~N 177 (342)
T 1b6c_B 109 N-GTWTQLWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKN 177 (342)
T ss_dssp C-SSCCCEEEEECCCTTCBHHHHHHHCC-------BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGG
T ss_pred C-CccceeEEEEeecCCCcHHHHHhccC-------ccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHH
Confidence 1 11237899999999999999998653 789999999999999999999 67 99999999999
Q ss_pred eeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHH
Q 001908 821 VLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900 (997)
Q Consensus 821 Ill~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl 900 (997)
|+++.++++||+|||+++....... ..........||+.|+|||++..... .....++.++|||||||++
T Consensus 178 Ill~~~~~~kL~Dfg~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~Di~slG~il 247 (342)
T 1b6c_B 178 ILVKKNGTCCIADLGLAVRHDSATD----TIDIAPNHRVGTKRYMAPEVLDDSIN------MKHFESFKRADIYAMGLVF 247 (342)
T ss_dssp EEECTTSCEEECCCTTCEEEETTTT----EEEECCCSCCCCGGGCCHHHHTSCCC------TTCHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCEEEEECCCceecccccc----ccccccccCCcCcccCCHhhhccccc------ccccccCCcccHHHHHHHH
Confidence 9999999999999999976532211 00112234579999999988753210 0001344789999999999
Q ss_pred HHHHhC----------CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCC
Q 001908 901 LEMFTR----------RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970 (997)
Q Consensus 901 ~elltg----------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 970 (997)
|||+|| ..||............+........ .++..... ....+++..+.+++.+||+.
T Consensus 248 ~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~-------~~~~~~~~~l~~li~~cl~~ 316 (342)
T 1b6c_B 248 WEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQK----LRPNIPNR-------WQSCEALRVMAKIMRECWYA 316 (342)
T ss_dssp HHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC----CCCCCCGG-------GGTSHHHHHHHHHHHHHCCS
T ss_pred HHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHH----hCCCCccc-------ccchhHHHHHHHHHHHHhcc
Confidence 999999 7788755444434444333221111 11111111 11235677899999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhh
Q 001908 971 SPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 971 dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
||++|||+.|+++.|+++.++..
T Consensus 317 dp~~Rps~~~i~~~L~~i~~~~~ 339 (342)
T 1b6c_B 317 NGAARLTALRIKKTLSQLSQQEG 339 (342)
T ss_dssp SGGGSCCHHHHHHHHHHHHHTTC
T ss_pred ChhhCCCHHHHHHHHHHHHHHhc
Confidence 99999999999999999987653
No 144
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-38 Score=352.15 Aligned_cols=272 Identities=20% Similarity=0.317 Sum_probs=206.3
Q ss_pred HHhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeecc
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSI 748 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~ 748 (997)
...++|++.+.||+|+||+||+|++ ..+++.||||+++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-- 119 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT-- 119 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC--
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEe--
Confidence 3457899999999999999999997 345678999999743 333457889999999999 8999999999954
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCC-----------------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQP-----------------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~-----------------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
..+..++||||+++|+|.+++....... ....+++..++.++.|++.||+|||++ +|
T Consensus 120 ---~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 193 (344)
T 1rjb_A 120 ---LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SC 193 (344)
T ss_dssp ---SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred ---eCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 3557999999999999999998764210 012378999999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+||||||+||+++.++.+||+|||+++...... .........||+.|+|||.+. +..++.++
T Consensus 194 vH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~ 255 (344)
T 1rjb_A 194 VHRDLAARNVLVTHGKVVKICDFGLARDIMSDS------NYVVRGNARLPVKWMAPESLF------------EGIYTIKS 255 (344)
T ss_dssp EETTCSGGGEEEETTTEEEECCCGGGSCGGGCT------TSEEETTEEECGGGCCHHHHH------------HCCCCHHH
T ss_pred ccCCCChhhEEEcCCCcEEeCCCccCcccccCc------cceeccCccCccCccCHHHhc------------cCCCChhH
Confidence 999999999999999999999999998653221 111233456788999997764 35688999
Q ss_pred hhHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCC
Q 001908 892 DVYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970 (997)
Q Consensus 892 DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 970 (997)
|||||||++|||+| |..||....... .+....... ..+. .+..++.++.+++.+||..
T Consensus 256 Di~slG~il~el~t~g~~p~~~~~~~~-~~~~~~~~~--------~~~~------------~~~~~~~~l~~li~~~l~~ 314 (344)
T 1rjb_A 256 DVWSYGILLWEIFSLGVNPYPGIPVDA-NFYKLIQNG--------FKMD------------QPFYATEEIYIIMQSCWAF 314 (344)
T ss_dssp HHHHHHHHHHHHTTTSCCSSTTCCCSH-HHHHHHHTT--------CCCC------------CCTTCCHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHHcCCCCCcccCCcHH-HHHHHHhcC--------CCCC------------CCCCCCHHHHHHHHHHcCC
Confidence 99999999999998 999997542211 111111110 0000 0112345788999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhc
Q 001908 971 SPIERMEMRDVLAKLCAARQTLVG 994 (997)
Q Consensus 971 dP~~Rps~~evl~~L~~~~~~~~~ 994 (997)
||++|||+.|+++.|+.+..+...
T Consensus 315 dp~~Rps~~~l~~~l~~~~~~~~~ 338 (344)
T 1rjb_A 315 DSRKRPSFPNLTSFLGCQLADAEE 338 (344)
T ss_dssp SGGGSCCHHHHHHHHHHHC-----
T ss_pred CchhCcCHHHHHHHHHHHHHHHHH
Confidence 999999999999999998765443
No 145
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=345.33 Aligned_cols=271 Identities=21% Similarity=0.292 Sum_probs=197.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.++||+|+||+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-----~~~~~ 77 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFR-----RKRRL 77 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheee-----cCCeE
Confidence 57899999999999999999999899999999986432 334567889999999999999999999964 35589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 148 (311)
T 4agu_A 78 HLVFEYCDHTVLHELDRYQR------GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGF 148 (311)
T ss_dssp EEEEECCSEEHHHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEeCCCchHHHHHhhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCC
Confidence 99999999999999887654 478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 149 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~ 209 (311)
T 4agu_A 149 ARLLTGP--------SDYYDDEVATRWYRSPELLVG-----------DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209 (311)
T ss_dssp CEECC--------------------GGGCCHHHHHT-----------CSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred chhccCc--------ccccCCCcCCccccChHHHhc-----------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9765221 112234578999999987642 256789999999999999999999999743211
Q ss_pred CccHHHHHHh---hcchhhhhhcCcccccc--ccc----chhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKM---ALPEKVMETVDPSLLLA--WSD----GRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~---~~~~~~~~~~d~~~~~~--~~~----~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ........ ..+.............. ..+ ..........+.++.+++.+||+.||++|||++|+++
T Consensus 210 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 210 D-QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp H-HHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 1 11111110 00000000000000000 000 0000011234556889999999999999999999975
No 146
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=9.3e-38 Score=349.26 Aligned_cols=262 Identities=27% Similarity=0.455 Sum_probs=198.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCC----cEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENG----TFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|+..+.||+|+||+||+|+++.++ ..||||+++.. .......+.+|++++++++||||+++++++. ..
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~ 118 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVIS-----KY 118 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SS
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEe-----cC
Confidence 46777899999999999999886443 46999999743 3345567899999999999999999999953 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 119 ~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~D 190 (333)
T 1mqb_A 119 KPMMIITEYMENGALDKFLREKDG-----EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSD 190 (333)
T ss_dssp SSEEEEEECCTTEEHHHHHHHTTT-----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECC
T ss_pred CCcEEEEeCCCCCcHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECC
Confidence 689999999999999999987532 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||.++....... .........+|+.|+|||++. +..++.++|||||||++|||++ |+.||..
T Consensus 191 fg~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~ellt~g~~pf~~ 253 (333)
T 1mqb_A 191 FGLSRVLEDDPE-----ATYTTSGGKIPIRWTAPEAIS------------YRKFTSASDVWSFGIVMWEVMTYGERPYWE 253 (333)
T ss_dssp CCC----------------------CCCGGGSCHHHHH------------SCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCcchhhccccc-----cccccCCCCccccccCchhcc------------cCCCCchhhhHHHHHHHHHHHcCCCCCccc
Confidence 999987632211 111122345688999997664 4678899999999999999999 9999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.. ..+...... ..... +.+..++.++.+++.+||+.||++||++.|+++.|+++..+.
T Consensus 254 ~~-----~~~~~~~~~-----~~~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 311 (333)
T 1mqb_A 254 LS-----NHEVMKAIN-----DGFRL------------PTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAP 311 (333)
T ss_dssp CC-----HHHHHHHHH-----TTCCC------------CCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSG
T ss_pred CC-----HHHHHHHHH-----CCCcC------------CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcc
Confidence 31 111111110 00000 011123557889999999999999999999999999987654
No 147
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=7.1e-38 Score=338.78 Aligned_cols=258 Identities=27% Similarity=0.406 Sum_probs=205.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||.||+|++. +++.||+|++..... ..+.+.+|++++++++||||+++++++. ..+..+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 79 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCL-----EQAPIC 79 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEEC-----SSSSCE
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEc-----cCCCeE
Confidence 367899999999999999999997 678999999975433 2367899999999999999999999954 355789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 80 lv~e~~~~~~L~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~ 151 (267)
T 3t9t_A 80 LVTEFMEHGCLSDYLRTQRG-----LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMT 151 (267)
T ss_dssp EEECCCTTCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGG
T ss_pred EEEeCCCCCcHHHHHhhCcc-----cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccc
Confidence 99999999999999987542 378999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+.... ..........+|..|+|||++. +..++.++||||+|+++|||++ |+.||....
T Consensus 152 ~~~~~-------~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~-- 210 (267)
T 3t9t_A 152 RFVLD-------DQYTSSTGTKFPVKWASPEVFS------------FSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS-- 210 (267)
T ss_dssp GGBCC-------HHHHSTTSTTCCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--
T ss_pred ccccc-------ccccccccccccccccChhhhc------------CCCccchhchhhhHHHHHHHhccCCCCCCCCC--
Confidence 86521 1111223345788999997765 3568899999999999999999 899987421
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..+...... ....+.. +..++..+.+++.+||..||++||+++|+++.|+++.++
T Consensus 211 ---~~~~~~~i~-----~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (267)
T 3t9t_A 211 ---NSEVVEDIS-----TGFRLYK------------PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265 (267)
T ss_dssp ---HHHHHHHHH-----TTCCCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred ---HHHHHHHHh-----cCCcCCC------------CccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 111111110 0000000 011245678999999999999999999999999998763
No 148
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4e-37 Score=351.93 Aligned_cols=212 Identities=24% Similarity=0.370 Sum_probs=165.9
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 752 (997)
...++|++.+.||+|+||+||+|.++.+++.||||++.. ......+.+.+|+.+++++. ||||+++++++.. .+
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~---~~ 82 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA---DN 82 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---TT
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec---CC
Confidence 345789999999999999999999999999999999853 23445567889999999997 9999999999753 23
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
....|+||||++ |+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 83 ~~~~~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~ 151 (388)
T 3oz6_A 83 DRDVYLVFDYME-TDLHAVIRANI-------LEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVA 151 (388)
T ss_dssp SSCEEEEEECCS-EEHHHHHHHTC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEEC
T ss_pred CCEEEEEecccC-cCHHHHHHcCC-------CCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEec
Confidence 457899999996 69999998743 88899999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCc-------------cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHH
Q 001908 833 DFGLARFLFARPFDTS-------------METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM 899 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~-------------~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvv 899 (997)
|||+|+.......... ..........+||+.|+|||++.. ...++.++||||+||+
T Consensus 152 DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DiwSlG~i 220 (388)
T 3oz6_A 152 DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG-----------STKYTKGIDMWSLGCI 220 (388)
T ss_dssp CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT-----------CCCCCTHHHHHHHHHH
T ss_pred CCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC-----------CCCCCChhhHHHHHHH
Confidence 9999986532111000 011122344689999999977642 2568999999999999
Q ss_pred HHHHHhCCCCCCc
Q 001908 900 LLEMFTRRRPTNC 912 (997)
Q Consensus 900 l~elltg~~P~~~ 912 (997)
+|||++|++||..
T Consensus 221 l~ell~g~~pf~~ 233 (388)
T 3oz6_A 221 LGEILCGKPIFPG 233 (388)
T ss_dssp HHHHHHSSCSCCC
T ss_pred HHHHHhCCCCCCC
Confidence 9999999999974
No 149
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.5e-38 Score=351.45 Aligned_cols=275 Identities=21% Similarity=0.324 Sum_probs=212.0
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEECCCCc-----EEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeee
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGT-----FVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVC 745 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~-----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~ 745 (997)
+.+...++|++.+.||+|+||.||+|++..+++ .||+|+++.. .....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 344456789999999999999999999876554 7999999744 334567889999999999 899999999995
Q ss_pred eccCcCCCceEEEEEeeccCCCHHHHhhcCCCC--------CCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 746 SSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQ--------PEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 746 ~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~--------~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
. ..+..++||||+++|+|.+++...... .....+++..++.++.|++.||+|||++ +|+|||||
T Consensus 120 ~-----~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 191 (333)
T 2i1m_A 120 T-----HGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVA 191 (333)
T ss_dssp C-----SSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred e-----cCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcc
Confidence 4 455799999999999999999864210 0012478999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 818 ~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
|+||+++.++.+||+|||+|+...... .........||+.|+|||++. +..++.++||||||
T Consensus 192 p~NIl~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG 253 (333)
T 2i1m_A 192 ARNVLLTNGHVAKIGDFGLARDIMNDS------NYIVKGNARLPVKWMAPESIF------------DCVYTVQSDVWSYG 253 (333)
T ss_dssp GGGCEEEGGGEEEBCCCGGGCCGGGCT------TSEECSSCEECGGGSCHHHHH------------HCCCCHHHHHHHHH
T ss_pred cceEEECCCCeEEECcccccccccccc------ceeecCCCCCCccccCHHHhc------------cCCCChHHHHHHHH
Confidence 999999999999999999998653221 111223345788999997664 35688999999999
Q ss_pred HHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 898 VMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 898 vvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
|++|||+| |..||....... ......... ..+. .+..++..+.+++.+||+.||++||
T Consensus 254 ~il~el~t~g~~p~~~~~~~~-~~~~~~~~~--------~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rp 312 (333)
T 2i1m_A 254 ILLWEIFSLGLNPYPGILVNS-KFYKLVKDG--------YQMA------------QPAFAPKNIYSIMQACWALEPTHRP 312 (333)
T ss_dssp HHHHHHTTTSCCSSTTCCSSH-HHHHHHHHT--------CCCC------------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHcCCCCCCcccchhH-HHHHHHhcC--------CCCC------------CCCCCCHHHHHHHHHHhccChhhCc
Confidence 99999999 999987432221 111111111 0000 0111245678999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhc
Q 001908 977 EMRDVLAKLCAARQTLVG 994 (997)
Q Consensus 977 s~~evl~~L~~~~~~~~~ 994 (997)
|+.|+++.|+++.++..+
T Consensus 313 s~~~l~~~L~~~~~~~~~ 330 (333)
T 2i1m_A 313 TFQQICSFLQEQAQEDRR 330 (333)
T ss_dssp CHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhc
Confidence 999999999998876543
No 150
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=3.4e-37 Score=357.03 Aligned_cols=213 Identities=23% Similarity=0.311 Sum_probs=171.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|+++.+++.||||+++.. .....+.+.+|++++++++||||+++++++...++.....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46899999999999999999999999999999999642 3345578899999999999999999999976544444467
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||++ |+|.+++.... .+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~------~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI------FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 999999995 69999998754 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCcc--------------ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHH
Q 001908 836 LARFLFARPFDTSM--------------ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901 (997)
Q Consensus 836 ~a~~~~~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ 901 (997)
+|+........... .........+||+.|+|||++. ....++.++||||+||++|
T Consensus 175 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~-----------~~~~~~~~~DiwSlG~il~ 243 (432)
T 3n9x_A 175 LARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELIL-----------LQENYTKSIDIWSTGCIFA 243 (432)
T ss_dssp TCEEC-------------------------------CCCCCTTCCHHHHT-----------TCSCCCTHHHHHHHHHHHH
T ss_pred CcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHh-----------cCCCCCcccccchHHHHHH
Confidence 99876332111000 0011235578999999997653 2456899999999999999
Q ss_pred HHHhCCCCCC
Q 001908 902 EMFTRRRPTN 911 (997)
Q Consensus 902 elltg~~P~~ 911 (997)
||++|..||.
T Consensus 244 ell~g~~p~~ 253 (432)
T 3n9x_A 244 ELLNMLQSHI 253 (432)
T ss_dssp HHHTTCTTTC
T ss_pred HHHhcccccc
Confidence 9998666554
No 151
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=7e-37 Score=336.33 Aligned_cols=272 Identities=21% Similarity=0.263 Sum_probs=206.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+.++. ...+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~ 80 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYN 80 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEE----EETTEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeec----CCCCce
Confidence 45789999999999999999999988999999998754322 245788999999999988888777763 345678
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~D 833 (997)
++||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+|
T Consensus 81 ~lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~D 151 (296)
T 4hgt_A 81 VMVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIID 151 (296)
T ss_dssp EEEEECC-CCBHHHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECC
T ss_pred EEEEEcc-CCCHHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEec
Confidence 9999999 9999999986432 388999999999999999999999 99999999999999 7899999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.......... ..........||+.|+|||.+. +..++.++|||||||++|||++|+.||...
T Consensus 152 fg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 218 (296)
T 4hgt_A 152 FGLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHL------------GIEQSRRDDLESLGYVLMYFNLGSLPWQGL 218 (296)
T ss_dssp CTTCEECBCTTTCCB-CCCCCSCCCCSCGGGCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred CccceeccCcccCcc-CCCCcccccCCCccccchHHhc------------CCCCCchhHHHHHHHHHHHHhcCCCCCccc
Confidence 999987633221110 1112233567999999997654 567899999999999999999999999854
Q ss_pred cCCC--ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 914 FQGG--LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 914 ~~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... ..+............ + .....++.++.+++..||+.||++|||++++++.|+++.++
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~-----~------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~ 281 (296)
T 4hgt_A 219 KAATKRQKYERISEKKMSTPI-----E------------VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHR 281 (296)
T ss_dssp CCSSSSSHHHHHHHHHHHSCH-----H------------HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHH
T ss_pred chhhhhhhhhhhhcccccchh-----h------------hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH
Confidence 3221 111111111100000 0 00012346788999999999999999999999999999886
Q ss_pred hh
Q 001908 992 LV 993 (997)
Q Consensus 992 ~~ 993 (997)
..
T Consensus 282 ~~ 283 (296)
T 4hgt_A 282 QG 283 (296)
T ss_dssp HT
T ss_pred hC
Confidence 53
No 152
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.2e-37 Score=335.59 Aligned_cols=258 Identities=24% Similarity=0.355 Sum_probs=202.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|++ .++.||||+++.. .....+.+.+|++++++++||||+++++++... ....
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRW--QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP---PAPH 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT---TSSS
T ss_pred HHHhHHHHHhcCCCcceEEEEEE--CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC---CCCC
Confidence 35799999999999999999999 4889999999743 344557899999999999999999999997532 2367
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeCCCCcEEEcc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~~~~~~kl~D 833 (997)
.++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+|++|
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~ 156 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTN----FVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISM 156 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSS----CCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEG
T ss_pred eEeeecccCCCcHHHHHhhccc----CCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEe
Confidence 8999999999999999987542 2489999999999999999999998 7 99999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||++... ......||+.|+|||.+.... ...++.++|||||||++|||++|+.||...
T Consensus 157 ~~~~~~~-------------~~~~~~~t~~y~aPE~~~~~~---------~~~~~~~~Di~slG~il~el~~g~~p~~~~ 214 (271)
T 3kmu_A 157 ADVKFSF-------------QSPGRMYAPAWVAPEALQKKP---------EDTNRRSADMWSFAVLLWELVTREVPFADL 214 (271)
T ss_dssp GGSCCTT-------------SCTTCBSCGGGSCHHHHHSCG---------GGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred ccceeee-------------cccCccCCccccChhhhccCC---------CCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9887542 112346899999998875311 123345899999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
. ..+..... ......+.. +..++.++.+++.+||+.||++|||+.|+++.|+++.+
T Consensus 215 ~-----~~~~~~~~----~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 215 S-----NMEIGMKV----ALEGLRPTI------------PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp C-----HHHHHHHH----HHSCCCCCC------------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred C-----hHHHHHHH----HhcCCCCCC------------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 11111111 001111111 11234568899999999999999999999999998754
No 153
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=350.58 Aligned_cols=248 Identities=22% Similarity=0.265 Sum_probs=192.7
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEee
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
..+.||+|+||.||+|+...+++.||+|+++.......+.+.+|++++++++||||+++++++. ..+..++||||
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~-----~~~~~~lv~E~ 167 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFE-----SKNDIVLVMEY 167 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSEEEEEEEC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEE-----ECCEEEEEEeC
Confidence 3578999999999999999899999999998766566678999999999999999999999954 45689999999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee--CCCCcEEEcccccchhc
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL--DHDMVAHVSDFGLARFL 840 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll--~~~~~~kl~DFg~a~~~ 840 (997)
+++|+|.+++.... ..+++..++.++.||+.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 168 ~~~~~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~ 239 (373)
T 2x4f_A 168 VDGGELFDRIIDES-----YNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRY 239 (373)
T ss_dssp CTTCEEHHHHHHTG-----GGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEEC
T ss_pred CCCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceec
Confidence 99999999997643 2478999999999999999999999 99999999999999 67789999999999865
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccH
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTL 920 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~ 920 (997)
... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.... .
T Consensus 240 ~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~elltg~~pf~~~~-----~ 293 (373)
T 2x4f_A 240 KPR---------EKLKVNFGTPEFLAPEVVN------------YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN-----D 293 (373)
T ss_dssp CTT---------CBCCCCCSSCTTCCHHHHT------------TCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS-----H
T ss_pred CCc---------cccccccCCCcEeChhhcc------------CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----H
Confidence 221 1122346999999997654 4678899999999999999999999997431 1
Q ss_pred HHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 921 HEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 921 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.+.......... ...++ .....+.++.+++.+||..||++|||+.|+++
T Consensus 294 ~~~~~~i~~~~~-~~~~~-------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 294 AETLNNILACRW-DLEDE-------------EFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHHHHHHTCC-CSCSG-------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHhccC-CCChh-------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 111111110000 00000 01123456789999999999999999999987
No 154
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.4e-37 Score=347.20 Aligned_cols=250 Identities=23% Similarity=0.297 Sum_probs=199.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (997)
..++|++.+.||+|+||+||+|+.+.+++.||||+++.. .....+.+.+|.++++.+ +||+|+++++++ ..
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~-----~~ 92 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF-----QT 92 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE-----EC
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE-----Ec
Confidence 346899999999999999999999988999999999743 233456788999999988 799999999984 45
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+
T Consensus 93 ~~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~ 163 (353)
T 2i0e_A 93 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 163 (353)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEEC
T ss_pred CCEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEE
Confidence 668999999999999999998754 488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+.... ........+||+.|+|||++. +..++.++||||+||++|||++|+.||..
T Consensus 164 DFG~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 164 DFGMCKENIW--------DGVTTKTFCGTPDYIAPEIIA------------YQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp CCTTCBCCCC--------TTCCBCCCCSCGGGCCHHHHT------------TCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eCCccccccc--------CCcccccccCCccccChhhhc------------CCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 9999975321 112234467999999997664 46789999999999999999999999974
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC-----HHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME-----MRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps-----~~evl~ 983 (997)
. ...+......... ... +.....++.+++.+||..||++||+ ++|+++
T Consensus 224 ~-----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 224 E-----DEDELFQSIMEHN------VAY------------PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp S-----SHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C-----CHHHHHHHHHhCC------CCC------------CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 2 1222211111100 000 0112456789999999999999995 466543
No 155
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.6e-38 Score=347.53 Aligned_cols=277 Identities=20% Similarity=0.318 Sum_probs=213.5
Q ss_pred ChHHHHHHhhcCccCCcccccCcceEEEEEE-----CCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEE
Q 001908 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGIL-----GENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKII 742 (997)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~ 742 (997)
.........++|++.+.||+|+||+||+|++ ..+++.||||+++.. .....+.+.+|+++++++ +||||++++
T Consensus 18 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~ 97 (316)
T 2xir_A 18 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 97 (316)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEE
Confidence 3445555678999999999999999999985 356789999999743 334456889999999999 799999999
Q ss_pred eeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCC----------cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcE
Q 001908 743 TVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPE----------VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIV 812 (997)
Q Consensus 743 ~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~----------~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~iv 812 (997)
+++.. .....++||||+++|+|.+++........ ...+++..++.++.|++.||+|||++ +|+
T Consensus 98 ~~~~~----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~ 170 (316)
T 2xir_A 98 GACTK----PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCI 170 (316)
T ss_dssp EEECC----TTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCC
T ss_pred EEEec----CCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Ccc
Confidence 99643 23468999999999999999987652100 11278899999999999999999999 999
Q ss_pred ecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccch
Q 001908 813 HGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892 (997)
Q Consensus 813 HrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~D 892 (997)
||||||+||+++.++.+||+|||+++...... .........||+.|+|||++. +..++.++|
T Consensus 171 H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~D 232 (316)
T 2xir_A 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDP------DYVRKGDARLPLKWMAPETIF------------DRVYTIQSD 232 (316)
T ss_dssp CSCCSGGGEEECGGGCEEECCCGGGSCTTTCT------TSEEETTEEECGGGCCHHHHH------------HCCCCHHHH
T ss_pred cccCccceEEECCCCCEEECCCccccccccCc------cceeccCCCcceeecCchhhc------------cccccchhH
Confidence 99999999999999999999999998653211 112223456789999997764 466889999
Q ss_pred hHHHHHHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 893 VYSLGVMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 893 vwSlGvvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
||||||++|||+| |+.||....... .+....... ..... +..+++++.+++.+||+.|
T Consensus 233 i~slG~il~~l~t~g~~p~~~~~~~~-~~~~~~~~~--------~~~~~------------~~~~~~~l~~li~~~l~~d 291 (316)
T 2xir_A 233 VWSFGVLLWEIFSLGASPYPGVKIDE-EFCRRLKEG--------TRMRA------------PDYTTPEMYQTMLDCWHGE 291 (316)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTCCCSH-HHHHHHHHT--------CCCCC------------CTTCCHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHHHhCCCCCCcccchhH-HHHHHhccC--------ccCCC------------CCCCCHHHHHHHHHHcCCC
Confidence 9999999999998 999987432221 111111100 00000 0112456789999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHh
Q 001908 972 PIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 972 P~~Rps~~evl~~L~~~~~~~ 992 (997)
|++|||+.|+++.|+++.++.
T Consensus 292 p~~Rps~~ell~~L~~~~~~~ 312 (316)
T 2xir_A 292 PSQRPTFSELVEHLGNLLQAN 312 (316)
T ss_dssp GGGSCCHHHHHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHHHhhh
Confidence 999999999999999998764
No 156
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-37 Score=339.92 Aligned_cols=266 Identities=23% Similarity=0.411 Sum_probs=204.4
Q ss_pred cCccCCcccccCcceEEEEEECCCCc---EEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGT---FVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.|...++||+|+||+||+|++..+++ .||+|++... .....+.+.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----~~~~ 97 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLP----PEGL 97 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECC----SSSC
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEec----CCCC
Confidence 45667899999999999999754444 7999999743 33456788999999999999999999999643 2334
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+.+|+|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 98 ~~~v~e~~~~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 98 PHVLLPYMCHGDLLQFIRSPQR-----NPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CEEEECCCTTCBHHHHHHCTTC-----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred cEEEEecccCCCHHHHHhcccc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 5899999999999999987432 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+....... ..........+|+.|+|||.+. +..++.++|||||||++|||++|..|+.....
T Consensus 170 ~~~~~~~~~~----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~ 233 (298)
T 3pls_A 170 LARDILDREY----YSVQQHRHARLPVKWTALESLQ------------TYRFTTKSDVWSFGVLLWELLTRGAPPYRHID 233 (298)
T ss_dssp SSCTTTTGGG----GCSCCSSCTTCGGGGSCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC
T ss_pred CcccccCCcc----cccccCcCCCCCccccChhhhc------------cCCCChhhchhhHHHHHHHHhhCCCCCCccCC
Confidence 9976532111 1112233456889999997654 56789999999999999999996655432211
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLVG 994 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 994 (997)
...+........ .. +.+..++..+.+++.+||+.||++|||++++++.|+++..++.+
T Consensus 234 -~~~~~~~~~~~~--------~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~ 291 (298)
T 3pls_A 234 -PFDLTHFLAQGR--------RL------------PQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLG 291 (298)
T ss_dssp -GGGHHHHHHTTC--------CC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCS
T ss_pred -HHHHHHHhhcCC--------CC------------CCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhc
Confidence 111222111110 00 00112345688999999999999999999999999999887654
No 157
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6e-37 Score=357.18 Aligned_cols=269 Identities=22% Similarity=0.258 Sum_probs=196.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 754 (997)
.++|++.++||+|+||+||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++.... .....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46899999999999999999999999999999999643 3445678899999999999999999999975432 13346
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..|+||||+++ ++.+.+.. .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~--------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DF 208 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 208 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred eEEEEEeCCCC-CHHHHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEE
Confidence 78999999965 57777653 278889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ........||+.|+|||++. +..|+.++||||+||++|||++|+.||....
T Consensus 209 G~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlG~il~ell~g~~pF~g~~ 267 (464)
T 3ttj_A 209 GLARTAGT---------SFMMTPYVVTRYYRAPEVIL------------GMGYKENVDIWSVGCIMGEMVRHKILFPGRD 267 (464)
T ss_dssp CCC--------------CCCC----CCCTTCCHHHHT------------TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred EeeeecCC---------CcccCCCcccccccCHHHHc------------CCCCCHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 99986522 12234467999999997664 5678999999999999999999999997432
Q ss_pred CCCccHHHHHHh--hcc---hhhhhhcCcccc---------------ccccc---chhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 915 QGGLTLHEFCKM--ALP---EKVMETVDPSLL---------------LAWSD---GRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 915 ~~~~~~~~~~~~--~~~---~~~~~~~d~~~~---------------~~~~~---~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
....+... ... ........+... ..+.. ............++.+++.+||..|
T Consensus 268 ----~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~d 343 (464)
T 3ttj_A 268 ----YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343 (464)
T ss_dssp ----HHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred ----HHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCC
Confidence 11111111 000 000000000000 00000 0001112233567889999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|++|||++|+++
T Consensus 344 P~~R~ta~e~L~ 355 (464)
T 3ttj_A 344 PAKRISVDDALQ 355 (464)
T ss_dssp TTTSCCHHHHHT
T ss_pred hhhCCCHHHHhc
Confidence 999999999975
No 158
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=354.60 Aligned_cols=268 Identities=24% Similarity=0.257 Sum_probs=204.0
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeecc
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSI 748 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~ 748 (997)
.+.....++|++.+.||+|+||+||+|+.+.+++.||||+++.. .....+.+.+|++++..++||||+++++++
T Consensus 54 ~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~--- 130 (412)
T 2vd5_A 54 KEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF--- 130 (412)
T ss_dssp HHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE---
T ss_pred hhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE---
Confidence 34445568999999999999999999999999999999999642 223345678999999999999999999984
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
.+.+..|+||||+++|+|.+++.+... .+++..++.++.||+.||+|||++ +|+||||||+|||++.+++
T Consensus 131 --~~~~~~~lVmE~~~gg~L~~~l~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~ 200 (412)
T 2vd5_A 131 --QDENYLYLVMEYYVGGDLLTLLSKFGE-----RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGH 200 (412)
T ss_dssp --ECSSEEEEEECCCCSCBHHHHHHHHSS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSC
T ss_pred --eeCCEEEEEEcCCCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCC
Confidence 456689999999999999999987531 388999999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+...... .......+||+.|+|||++..... ...+..++.++|||||||++|||++|+.
T Consensus 201 vkL~DFGla~~~~~~~-------~~~~~~~~Gt~~Y~APE~l~~~~~-----~~~~~~~~~~~DiwSlGvilyelltG~~ 268 (412)
T 2vd5_A 201 IRLADFGSCLKLRADG-------TVRSLVAVGTPDYLSPEILQAVGG-----GPGTGSYGPECDWWALGVFAYEMFYGQT 268 (412)
T ss_dssp EEECCCTTCEECCTTS-------CEECSSCCSCGGGCCHHHHHHHHT-----CTTCSEECTHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeechhheeccCCC-------ccccceeccccCcCCHHHHhhccc-----CcCCCCCChHHhhhHHhHHHHHHHhCCC
Confidence 9999999998652211 112234579999999998863210 0113468899999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCC---CCHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER---MEMRDVLA 983 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R---ps~~evl~ 983 (997)
||.... ..+.......... ....|.. ....+.++.+++.+||. +|++| |+++|+++
T Consensus 269 Pf~~~~-----~~~~~~~i~~~~~-~~~~p~~------------~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 269 PFYADS-----TAETYGKIVHYKE-HLSLPLV------------DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp TTCCSS-----HHHHHHHHHTHHH-HCCCC----------------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred CCCCCC-----HHHHHHHHHhccc-CcCCCcc------------ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 997431 1121111111000 0000100 11234567899999999 99998 58888864
No 159
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.3e-39 Score=356.12 Aligned_cols=278 Identities=24% Similarity=0.344 Sum_probs=189.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhh--cCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN--TRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|++ +++.||||+++.. ....+.+|.+++.. ++||||+++++++.... .....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~ 75 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDN-GTWTQ 75 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C--TTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEEC-SSSEE
T ss_pred cceeeehhhccCCCCeEEEEEEE--cCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCC-Cccce
Confidence 36899999999999999999987 5889999998643 23567788888877 78999999999975432 12237
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--------hCCCCCcEecCCCCCCeeeCCCC
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH--------HHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH--------~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
.++||||+++|+|.++++... +++..+++++.|++.|++||| +. +|+||||||+||+++.++
T Consensus 76 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~ 145 (303)
T 3gxj_A 76 LWLVSDYHEHGSLFDYLNRYT-------VTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 145 (303)
T ss_dssp EEEEEECCTTCCHHHHHHHCC-------BCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTC
T ss_pred eEEEEeccCCCCHHHHHhccC-------cchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCC
Confidence 899999999999999997653 667788999999999999999 77 999999999999999999
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC-
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR- 906 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg- 906 (997)
.+||+|||+|+....... ..........||+.|+|||++..... .....++.++|||||||++|||+||
T Consensus 146 ~~kl~DFg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~DiwslG~il~el~~g~ 215 (303)
T 3gxj_A 146 TCCIADLGLAVRHDSATD----TIDIAPNHRVGTKRYMAPEVLDDSIN------MKHFESFKRADIYAMGLVFWEIARRC 215 (303)
T ss_dssp CC-BCCCCC-CCEETTTT----EESCC-----CCGGGCCHHHHTTCSC------TTCHHHHHHHHHHC-CCCC-CTGGGB
T ss_pred CEEEeecCcceeccCCCc----ccccccCCCCcCccccCHhhhcCccc------ccccccCcchhHHHHHHHHHHHHhcC
Confidence 999999999976532211 11112234579999999988753211 0011455789999999999999999
Q ss_pred ---------CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCC
Q 001908 907 ---------RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERME 977 (997)
Q Consensus 907 ---------~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps 977 (997)
..||...........+....... ...++.... .....+++..+.+++.+||+.||++|||
T Consensus 216 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~-------~~~~~~~~~~l~~li~~cl~~dP~~Rps 284 (303)
T 3gxj_A 216 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCE----QKLRPNIPN-------RWQSCEALRVMAKIMRECWYANGAARLT 284 (303)
T ss_dssp CBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTT----SCCCCCCCG-------GGGSSHHHHHHHHHHHTTCCSSGGGSCC
T ss_pred CCccccceeeccccccCCCCccHHHHHHHHHH----hhcCCCccc-------cccchhhHHHHHHHHHHHhccCcccCCC
Confidence 55654332211111111111000 011111111 1112356778999999999999999999
Q ss_pred HHHHHHHHHHHHHHh
Q 001908 978 MRDVLAKLCAARQTL 992 (997)
Q Consensus 978 ~~evl~~L~~~~~~~ 992 (997)
+.|+++.|+++.++.
T Consensus 285 ~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 285 ALRIKKTLSQLSQQE 299 (303)
T ss_dssp HHHHHHHHHC-CCC-
T ss_pred HHHHHHHHHHhhhhc
Confidence 999999999887654
No 160
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=2.4e-38 Score=352.93 Aligned_cols=259 Identities=22% Similarity=0.371 Sum_probs=200.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcE----EEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTF----VAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||+||+|++..+++. ||+|++.... ......+.+|+.++++++||||+++++++. .
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------~ 86 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP------G 86 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC------B
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc------C
Confidence 5788999999999999999999877765 7777775322 233456778999999999999999999863 3
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 87 ~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~D 158 (325)
T 3kex_A 87 SSLQLVTQYLPLGSLLDHVRQHRG-----ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVAD 158 (325)
T ss_dssp SSEEEEEECCTTCBSHHHHHSSGG-----GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECS
T ss_pred CccEEEEEeCCCCCHHHHHHHccc-----cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECC
Confidence 468999999999999999987531 377889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+|+...... .........||..|+|||.+. +..++.++|||||||++|||+| |+.||..
T Consensus 159 fg~a~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~el~~~g~~p~~~ 220 (325)
T 3kex_A 159 FGVADLLPPDD------KQLLYSEAKTPIKWMALESIH------------FGKYTHQSDVWSYGVTVWELMTFGAEPYAG 220 (325)
T ss_dssp CSGGGGSCCCT------TCCC-----CCTTTSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CCcccccCccc------ccccccCCCCcccccChHHhc------------cCCCChhhHhHHhHHHHHHHHhCCCCCccc
Confidence 99998763321 111223456788999997765 4668999999999999999999 9999975
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
.... .+.+...... ... .+..++.++.+++.+||..||++||+++|+++.|+++...
T Consensus 221 ~~~~--~~~~~~~~~~--------~~~------------~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 221 LRLA--EVPDLLEKGE--------RLA------------QPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp SCTT--HHHHHHHTTC--------BCC------------CCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred cCHH--HHHHHHHcCC--------CCC------------CCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 3211 1222111110 000 0011233567899999999999999999999999987653
No 161
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.5e-37 Score=340.44 Aligned_cols=254 Identities=21% Similarity=0.370 Sum_probs=200.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCC-------cEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENG-------TFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||+||+|+++.++ ..||+|++........+.+.+|++++++++||||+++++++.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---- 82 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCV---- 82 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEEC----
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEE----
Confidence 367899999999999999999998666 479999998666666788999999999999999999999954
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc--
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV-- 828 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~-- 828 (997)
..+..++||||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.
T Consensus 83 -~~~~~~lv~e~~~~~~L~~~l~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 153 (289)
T 4fvq_A 83 -CGDENILVQEFVKFGSLDTYLKKNKN-----CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRK 153 (289)
T ss_dssp -CTTCCEEEEECCTTCBHHHHHHHTGG-----GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGG
T ss_pred -eCCCCEEEEECCCCCCHHHHHHhCCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCccc
Confidence 35578999999999999999987541 378899999999999999999999 9999999999999998887
Q ss_pred ------EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 829 ------AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 829 ------~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+||+|||.+.... ......||+.|+|||++.. ...++.++|||||||++||
T Consensus 154 ~~~~~~~kl~Dfg~~~~~~------------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~e 210 (289)
T 4fvq_A 154 TGNPPFIKLSDPGISITVL------------PKDILQERIPWVPPECIEN-----------PKNLNLATDKWSFGTTLWE 210 (289)
T ss_dssp GTBCCEEEECCCCSCTTTS------------CHHHHHHTTTTSCHHHHHC-----------GGGCCHHHHHHHHHHHHHH
T ss_pred ccccceeeeccCccccccc------------CccccCCcCcccCHHHhCC-----------CCCCCchhHHHHHHHHHHH
Confidence 9999999986541 1123458899999987752 1457889999999999999
Q ss_pred HHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 903 MFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 903 lltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
|++|..|+..... .......... .+.... ..+.++.+++.+||+.||++|||+.|++
T Consensus 211 l~~g~~~~~~~~~----~~~~~~~~~~-------~~~~~~------------~~~~~l~~li~~~l~~dp~~Rps~~~ll 267 (289)
T 4fvq_A 211 ICSGGDKPLSALD----SQRKLQFYED-------RHQLPA------------PKAAELANLINNCMDYEPDHRPSFRAII 267 (289)
T ss_dssp HHTTTCCTTTTSC----HHHHHHHHHT-------TCCCCC------------CSSCTTHHHHHHHSCSSGGGSCCHHHHH
T ss_pred HHcCCCCCccccc----hHHHHHHhhc-------cCCCCC------------CCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence 9996555432211 1111110000 000000 0123467899999999999999999999
Q ss_pred HHHHHHHH
Q 001908 983 AKLCAARQ 990 (997)
Q Consensus 983 ~~L~~~~~ 990 (997)
+.|+++..
T Consensus 268 ~~l~~l~~ 275 (289)
T 4fvq_A 268 RDLNSLFT 275 (289)
T ss_dssp HHHHTCC-
T ss_pred HHHHHhcC
Confidence 99987643
No 162
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1e-36 Score=335.08 Aligned_cols=271 Identities=21% Similarity=0.262 Sum_probs=209.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|++..+++.||||++..... .+.+.+|+++++.++|++++..+.++. ...+..+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~----~~~~~~~ 81 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCG----AEGDYNV 81 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEE----EETTEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCcccccc----CCCCceE
Confidence 4689999999999999999999988999999999864332 246889999999999988777777653 3356789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDF 834 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DF 834 (997)
+||||+ +++|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||++ +.++.+||+||
T Consensus 82 lv~e~~-~~~L~~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Df 152 (296)
T 3uzp_A 82 MVMELL-GPSLEDLFNFCSR-----KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDF 152 (296)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEEec-CCCHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeC
Confidence 999999 9999999985432 488999999999999999999999 99999999999999 48899999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++.......... ..........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 153 g~~~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 219 (296)
T 3uzp_A 153 GLAKKYRDARTHQH-IPYRENKNLTGTARYASINTHL------------GIEQSRRDDLESLGYVLMYFNLGSLPWQGLK 219 (296)
T ss_dssp TTCEECBCTTTCCB-CCCCCSCCCCSCTTTCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CCcccccccccccc-cccccccccccccccCChhhhc------------CCCCCcchhhHHHHHHHHHHHhCCCCCCCcC
Confidence 99987643221110 1111234567999999996654 5678999999999999999999999998543
Q ss_pred CCC--ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 915 QGG--LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 915 ~~~--~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
... ..+............ +. ....++.++.+++.+||+.||++|||+.++++.|+++.++.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~-----~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~ 282 (296)
T 3uzp_A 220 AATKRQKYERISEKKMSTPI-----EV------------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 282 (296)
T ss_dssp CSSSSSHHHHHHHHHHHSCH-----HH------------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHT
T ss_pred chhhhhhhhhhcccccCCch-----HH------------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhc
Confidence 221 111111111100000 00 01123567889999999999999999999999999998775
Q ss_pred h
Q 001908 993 V 993 (997)
Q Consensus 993 ~ 993 (997)
.
T Consensus 283 ~ 283 (296)
T 3uzp_A 283 G 283 (296)
T ss_dssp T
T ss_pred C
Confidence 4
No 163
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=347.44 Aligned_cols=274 Identities=20% Similarity=0.213 Sum_probs=194.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccC---cCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSID---FKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~---~~~~ 753 (997)
..+|++.++||+|+||.||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++.... ....
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 458999999999999999999999899999999997666666778899999999996 999999999974321 1345
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC--cEecCCCCCCeeeCCCCcEEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP--IVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~--ivHrDlk~~NIll~~~~~~kl 831 (997)
...++||||++ |+|.+++...... ..+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl 179 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESR---GPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKL 179 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTT---CSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEB
T ss_pred ceEEEEEEecC-CCHHHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEE
Confidence 66899999995 7999998763211 1489999999999999999999998 7 999999999999999999999
Q ss_pred cccccchhcccCCCCCcc----ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 832 SDFGLARFLFARPFDTSM----ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~----~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
+|||+++........... ..........||+.|+|||++.. ..+..++.++|||||||++|||++|+
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~~~Dv~slG~il~el~~g~ 250 (337)
T 3ll6_A 180 CDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDL---------YSNFPIGEKQDIWALGCILYLLCFRQ 250 (337)
T ss_dssp CCCTTCBCCSSCC-------------------------------C---------CTTSCSSHHHHHHHHHHHHHHHHHSS
T ss_pred ecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhc---------cccCCCChHHhHHHHHHHHHHHHhCC
Confidence 999999876332111000 00111224568999999987631 13466889999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCA 987 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~ 987 (997)
.||...... ........ ... ...++..+.+++.+||+.||++|||+.|+++.|++
T Consensus 251 ~p~~~~~~~-----~~~~~~~~-----~~~---------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 305 (337)
T 3ll6_A 251 HPFEDGAKL-----RIVNGKYS-----IPP---------------HDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQE 305 (337)
T ss_dssp CCC-----------------CC-----CCT---------------TCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHH
T ss_pred CCCcchhHH-----HhhcCccc-----CCc---------------ccccchHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 998642111 11000000 000 00112346789999999999999999999999999
Q ss_pred HHHHh
Q 001908 988 ARQTL 992 (997)
Q Consensus 988 ~~~~~ 992 (997)
+..+.
T Consensus 306 ~~~~~ 310 (337)
T 3ll6_A 306 IAAAR 310 (337)
T ss_dssp HHHHT
T ss_pred HHhcc
Confidence 87653
No 164
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=2.4e-37 Score=356.56 Aligned_cols=257 Identities=23% Similarity=0.279 Sum_probs=193.1
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
...++|.+.+.||+|+||+||+|.++.+++.||||++.... ......+.+|++++++++||||+++++++.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 45678999999999999999999999999999999986432 112235789999999999999999999853
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
.+..++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 211 -----~~~~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~ 276 (419)
T 3i6u_A 211 -----AEDYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 276 (419)
T ss_dssp -----SSEEEEEEECCTTCBGGGGTSSSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSS
T ss_pred -----cCceEEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCC
Confidence 235799999999999999887654 488999999999999999999999 999999999999997544
Q ss_pred ---cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 828 ---VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 828 ---~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.+||+|||+|+.... ........||+.|+|||++... ....++.++|||||||++|||+
T Consensus 277 ~~~~~kl~DFG~a~~~~~---------~~~~~~~~gt~~y~aPE~~~~~---------~~~~~~~~~DiwslG~il~~ll 338 (419)
T 3i6u_A 277 EDCLIKITDFGHSKILGE---------TSLMRTLCGTPTYLAPEVLVSV---------GTAGYNRAVDCWSLGVILFICL 338 (419)
T ss_dssp SSCCEEECCSSTTTSCC--------------------CTTCCTTTTC-------------CTTHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEeecccceecCC---------CccccccCCCCCccCceeeecC---------CCCCCCchhhhHhHHHHHHHHH
Confidence 599999999986521 1122346799999999876321 1356788999999999999999
Q ss_pred hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+|+.||....... .+.+......... . .......+.++.+++.+||..||++|||+.|+++
T Consensus 339 tg~~pf~~~~~~~-~~~~~i~~~~~~~-----~------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 339 SGYPPFSEHRTQV-SLKDQITSGKYNF-----I------------PEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HSSCSSCCCSSSC-CHHHHHHTTCCCC-----C------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HCCCCCCCCcchH-HHHHHHhcCCCCC-----C------------chhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 9999997543222 2222111110000 0 0111123456789999999999999999999976
No 165
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=7.5e-38 Score=343.25 Aligned_cols=263 Identities=25% Similarity=0.328 Sum_probs=204.4
Q ss_pred hhcCccCC-cccccCcceEEEEEE--CCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 678 TNEFSSSN-MIGQGSFGSVYKGIL--GENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 678 ~~~~~~~~-~lg~G~~g~V~~~~~--~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
.++|++.+ .||+|+||+||+|.+ ..+++.||||+++... ....+.+.+|++++++++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~------ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE------ 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEE------
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEC------
Confidence 35788877 999999999999954 5567899999997432 334578899999999999999999999862
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~ 159 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKIS 159 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEEC
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCc------CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEc
Confidence 346899999999999999998754 478999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 911 (997)
|||+++...... ..........+|+.|+|||.+. +..++.++|||||||++|||++ |+.||.
T Consensus 160 Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~g~~p~~ 222 (291)
T 1xbb_A 160 DFGLSKALRADE-----NYYKAQTHGKWPVKWYAPECIN------------YYKFSSKSDVWSFGVLMWEAFSYGQKPYR 222 (291)
T ss_dssp CCTTCEECCTTC-----SEEEC----CCCGGGCCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTTCCSST
T ss_pred cCCcceeeccCC-----CcccccccCCCCceeeChHHhc------------cCCCChhhhHHHHHHHHHHHHhcCCCCCC
Confidence 999998653211 1111222345678999998765 3557889999999999999999 999987
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
... ..+...... ....+. .+..++..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 223 ~~~-----~~~~~~~~~-----~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 280 (291)
T 1xbb_A 223 GMK-----GSEVTAMLE-----KGERMG------------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYD 280 (291)
T ss_dssp TCC-----HHHHHHHHH-----TTCCCC------------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHH
T ss_pred CCC-----HHHHHHHHH-----cCCCCC------------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 432 111111110 000010 0112356788999999999999999999999999998876
Q ss_pred hhc
Q 001908 992 LVG 994 (997)
Q Consensus 992 ~~~ 994 (997)
..+
T Consensus 281 ~~~ 283 (291)
T 1xbb_A 281 VVN 283 (291)
T ss_dssp HHH
T ss_pred Hhh
Confidence 544
No 166
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.3e-37 Score=339.59 Aligned_cols=260 Identities=19% Similarity=0.351 Sum_probs=202.9
Q ss_pred HhhcCccCCcccccCcceEEEEEECC---CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGE---NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~ 752 (997)
..++|.+.+.||+|+||+||+|++.. ++..||+|+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 34689999999999999999998753 3346999999754 34456788999999999999999999998532
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
+..++||||+++++|.+++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+
T Consensus 85 -~~~~~v~e~~~~~~L~~~l~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~ 155 (281)
T 3cc6_A 85 -EPTWIIMELYPYGELGHYLERNKN-----SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLG 155 (281)
T ss_dssp -SSCEEEEECCTTCBHHHHHHHHTT-----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEEC
T ss_pred -CCCEEEEecCCCCCHHHHHHhccc-----cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeC
Confidence 346899999999999999987542 378999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCC
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTN 911 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~ 911 (997)
|||.++...... ........+|+.|+|||++. +..++.++|||||||++|||+| |+.||.
T Consensus 156 Dfg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~llt~g~~p~~ 216 (281)
T 3cc6_A 156 DFGLSRYIEDED-------YYKASVTRLPIKWMSPESIN------------FRRFTTASDVWMFAVCMWEILSFGKQPFF 216 (281)
T ss_dssp CCCGGGCC----------------CCCCCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred ccCCCccccccc-------ccccccCCCCcceeCchhhc------------cCCCCchhccHHHHHHHHHHHhCCCCCcc
Confidence 999998653211 11223345788999997764 4568899999999999999998 999987
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..... .......... ... .+..+++.+.+++.+||..||++||++.|+++.|+++.+.
T Consensus 217 ~~~~~--~~~~~~~~~~--------~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 274 (281)
T 3cc6_A 217 WLENK--DVIGVLEKGD--------RLP------------KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQM 274 (281)
T ss_dssp TSCGG--GHHHHHHHTC--------CCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred cCChH--HHHHHHhcCC--------CCC------------CCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHh
Confidence 43221 1111111100 000 0112345688999999999999999999999999998764
No 167
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=7e-38 Score=349.21 Aligned_cols=260 Identities=23% Similarity=0.391 Sum_probs=199.0
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcE----EEEEEecc-cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTF----VAVKILNL-MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~----vAvK~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
++|++.+.||+|+||+||+|++..+++. ||+|.+.. ......+.+.+|++++++++||||+++++++..
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 88 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT------ 88 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES------
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec------
Confidence 5799999999999999999999877765 46676643 233456788999999999999999999999753
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++|+||+++|+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 89 ~~~~~v~~~~~~g~L~~~l~~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~D 160 (327)
T 3lzb_A 89 STVQLITQLMPFGCLLDYVREHKD-----NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITD 160 (327)
T ss_dssp SSEEEEECCCSSCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECC
T ss_pred CCceEEEEecCCCcHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEcc
Confidence 247899999999999999987542 388999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCc
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNC 912 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~ 912 (997)
||+|+...... .........+|+.|+|||.+. +..++.++|||||||++|||++ |+.||..
T Consensus 161 fG~a~~~~~~~------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell~~g~~p~~~ 222 (327)
T 3lzb_A 161 FGLAKLLGAEE------KEYHAEGGKVPIKWMALESIL------------HRIYTHQSDVWSYGVTVWELMTFGSKPYDG 222 (327)
T ss_dssp TTC----------------------CCCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred CcceeEccCcc------ccccccCCCccccccCHHHHc------------CCCCChHHHHHHHHHHHHHHHHCCCCCCCC
Confidence 99998753211 111222345788999997665 4678999999999999999999 9999975
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
.... .+........ .. +.+..++.++.+++.+||..||++||++.|+++.|+++....
T Consensus 223 ~~~~--~~~~~~~~~~--------~~------------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 223 IPAS--EISSILEKGE--------RL------------PQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp CCGG--GHHHHHHTTC--------CC------------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred CCHH--HHHHHHHcCC--------CC------------CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 3221 1222111110 00 011123456889999999999999999999999999987543
No 168
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-37 Score=339.68 Aligned_cols=263 Identities=23% Similarity=0.345 Sum_probs=206.0
Q ss_pred hcCccCC-cccccCcceEEEEEEC--CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSN-MIGQGSFGSVYKGILG--ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~-~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|.+.+ .||+|+||.||+|+++ .++..||||+++.. .....+.+.+|++++++++||||+++++++. .+
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~ 82 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------AE 82 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE------SS
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec------CC
Confidence 4566665 9999999999999864 46788999999753 3445678899999999999999999999863 23
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... ..+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 83 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Df 154 (287)
T 1u59_A 83 ALMLVMEMAGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDF 154 (287)
T ss_dssp SEEEEEECCTTEEHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCC
T ss_pred CcEEEEEeCCCCCHHHHHHhCC-----ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcc
Confidence 5899999999999999997543 1488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCM 913 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~ 913 (997)
|+++...... ..........+|+.|+|||++. +..++.++|||||||++|||+| |+.||...
T Consensus 155 g~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~ellt~g~~p~~~~ 217 (287)
T 1u59_A 155 GLSKALGADD-----SYYTARSAGKWPLKWYAPECIN------------FRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 217 (287)
T ss_dssp TTCEECTTCS-----CEECCCCSSCCCGGGCCHHHHH------------HCEECHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred cceeeeccCc-----ceeeccccccccccccCHHHhc------------cCCCCchhhHHHHHHHHHHHHcCCCCCcccC
Confidence 9998663211 1111223345789999998764 3567889999999999999999 99998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
.. ..+....... ..+. .+..++.++.+++.+||..||++||++.|+++.|+++..+..
T Consensus 218 ~~--~~~~~~i~~~--------~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 275 (287)
T 1u59_A 218 KG--PEVMAFIEQG--------KRME------------CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLA 275 (287)
T ss_dssp CT--HHHHHHHHTT--------CCCC------------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred CH--HHHHHHHhcC--------CcCC------------CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 21 1111111100 0000 111335678899999999999999999999999999987664
Q ss_pred c
Q 001908 994 G 994 (997)
Q Consensus 994 ~ 994 (997)
+
T Consensus 276 ~ 276 (287)
T 1u59_A 276 S 276 (287)
T ss_dssp T
T ss_pred C
Confidence 3
No 169
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.7e-37 Score=346.68 Aligned_cols=272 Identities=22% Similarity=0.342 Sum_probs=192.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..++|++.++||+|+||+||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 106 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIH-----HNH 106 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEE-----ETT
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEe-----cCC
Confidence 4468999999999999999999999999999999997433 223456789999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee-----CCCCcE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL-----DHDMVA 829 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll-----~~~~~~ 829 (997)
..++||||++ |+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+
T Consensus 107 ~~~lv~e~~~-~~L~~~~~~~~------~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~ 176 (329)
T 3gbz_A 107 RLHLIFEYAE-NDLKKYMDKNP------DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVL 176 (329)
T ss_dssp EEEEEEECCS-EEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEE
T ss_pred EEEEEEecCC-CCHHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceE
Confidence 8999999997 59999998765 478999999999999999999999 99999999999999 455669
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.|
T Consensus 177 kl~Dfg~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~p 237 (329)
T 3gbz_A 177 KIGDFGLARAFGIP--------IRQFTHEIITLWYRPPEILLG-----------SRHYSTSVDIWSIACIWAEMLMKTPL 237 (329)
T ss_dssp EECCTTHHHHHC-------------------CCTTCCHHHHTT-----------CCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EECcCCCccccCCc--------ccccCCCcCCccccCHHHhcC-----------CCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 99999999876221 112234568999999977642 23478999999999999999999999
Q ss_pred CCcCcCCCccHHHHHHh-hcch-hhh-hhc-Cccccccc----ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 910 TNCMFQGGLTLHEFCKM-ALPE-KVM-ETV-DPSLLLAW----SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~-~~~~-~~~-~~~-d~~~~~~~----~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|....... .+...... ..+. ... ... .+.....+ ..............++.+++.+||+.||++|||+.|+
T Consensus 238 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 316 (329)
T 3gbz_A 238 FPGDSEID-QLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNA 316 (329)
T ss_dssp SCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred cCCCCHHH-HHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHH
Confidence 97432111 11111111 0110 000 000 00000000 0000011111234678899999999999999999999
Q ss_pred HH
Q 001908 982 LA 983 (997)
Q Consensus 982 l~ 983 (997)
++
T Consensus 317 l~ 318 (329)
T 3gbz_A 317 LE 318 (329)
T ss_dssp HT
T ss_pred hC
Confidence 75
No 170
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.5e-37 Score=347.88 Aligned_cols=268 Identities=23% Similarity=0.376 Sum_probs=207.4
Q ss_pred HhhcCccCCcccccCcceEEEEEEC-------CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeec
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILG-------ENGTFVAVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSS 747 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~-------~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~ 747 (997)
..++|++.+.||+|+||+||+|++. .++..||||+++.. .....+.+.+|+++++++ +||||+++++++.
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~- 111 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACT- 111 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEc-
Confidence 3578999999999999999999975 35678999999743 344567889999999999 8999999999954
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCC----------CcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQP----------EVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLK 817 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk 817 (997)
..+..++||||+++|+|.+++....... ....+++..++.++.||+.||+|||++ +|+|||||
T Consensus 112 ----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlk 184 (334)
T 2pvf_A 112 ----QDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLA 184 (334)
T ss_dssp ----SSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCS
T ss_pred ----cCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCc
Confidence 4557899999999999999998764211 112478999999999999999999999 99999999
Q ss_pred CCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHH
Q 001908 818 PSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLG 897 (997)
Q Consensus 818 ~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlG 897 (997)
|+||+++.++.+||+|||+++...... .........+|+.|+|||++. +..++.++||||||
T Consensus 185 p~NIll~~~~~~kL~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG 246 (334)
T 2pvf_A 185 ARNVLVTENNVMKIADFGLARDINNID------YYKKTTNGRLPVKWMAPEALF------------DRVYTHQSDVWSFG 246 (334)
T ss_dssp GGGEEECTTCCEEECCCTTCEECTTTS------SEECCSCCCCCGGGCCHHHHH------------HCEECHHHHHHHHH
T ss_pred cceEEEcCCCCEEEccccccccccccc------cccccCCCCcccceeChHHhc------------CCCcChHHHHHHHH
Confidence 999999999999999999998653211 111222345788999997764 35678999999999
Q ss_pred HHHHHHHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 898 VMLLEMFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 898 vvl~ellt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
|++|||++ |+.||... ...+..... .....+. .+..++.++.+++.+||..||++||
T Consensus 247 ~il~ellt~g~~p~~~~-----~~~~~~~~~-----~~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rp 304 (334)
T 2pvf_A 247 VLMWEIFTLGGSPYPGI-----PVEELFKLL-----KEGHRMD------------KPANCTNELYMMMRDCWHAVPSQRP 304 (334)
T ss_dssp HHHHHHHTTSCCSSTTC-----CHHHHHHHH-----HHTCCCC------------CCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHhCCCCCcCcC-----CHHHHHHHH-----hcCCCCC------------CCccCCHHHHHHHHHHccCChhhCc
Confidence 99999999 99998643 122221111 0000000 0112345788999999999999999
Q ss_pred CHHHHHHHHHHHHHHh
Q 001908 977 EMRDVLAKLCAARQTL 992 (997)
Q Consensus 977 s~~evl~~L~~~~~~~ 992 (997)
|+.|+++.|+++....
T Consensus 305 s~~ell~~L~~l~~~~ 320 (334)
T 2pvf_A 305 TFKQLVEDLDRILTLT 320 (334)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcc
Confidence 9999999999987643
No 171
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.2e-37 Score=339.21 Aligned_cols=266 Identities=23% Similarity=0.347 Sum_probs=198.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|....+++.||||+++. ........+.+|++++++++||||+++++++.. .+
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-----~~ 105 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-----DN 105 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TT
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----CC
Confidence 3579999999999999999999988999999999974 234456788999999999999999999999654 45
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++...... ...+++..++.++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Df 180 (310)
T 2wqm_A 106 ELNIVLELADAGDLSRMIKHFKKQ--KRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDL 180 (310)
T ss_dssp EEEEEEECCCSCBHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC
T ss_pred cEEEEEecCCCCCHHHHHHHhccc--ccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEec
Confidence 899999999999999999753211 12478999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++..... ........|++.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 181 g~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 240 (310)
T 2wqm_A 181 GLGRFFSSK--------TTAAHSLVGTPYYMSPERIH------------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDK 240 (310)
T ss_dssp --------------------------CCSSCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTC---
T ss_pred cceeeecCC--------CccccccCCCeeEeChHHhC------------CCCCCchhhHHHHHHHHHHHHhCCCCCcccc
Confidence 999765221 11123356899999997654 4678899999999999999999999987432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
. ...+...... ....+... ...++.++.+++.+||..||++|||+.++++.|+++....
T Consensus 241 ~---~~~~~~~~~~-----~~~~~~~~-----------~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~ 299 (310)
T 2wqm_A 241 M---NLYSLCKKIE-----QCDYPPLP-----------SDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACT 299 (310)
T ss_dssp C---CHHHHHHHHH-----TTCSCCCC-----------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred h---hHHHHHHHhh-----cccCCCCc-----------ccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhh
Confidence 1 1222111110 00000000 0123456889999999999999999999999999998754
No 172
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.1e-36 Score=348.66 Aligned_cols=349 Identities=16% Similarity=0.198 Sum_probs=218.7
Q ss_pred CCCCCCCCCCCe-eeeeeecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCc-cCCCCCCCeEEEc
Q 001908 52 TNSWNNSINLCQ-WAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPK-EIGFLFRLETLML 129 (997)
Q Consensus 52 ~~sW~~~~~~c~-w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~L 129 (997)
+++|....+||. |.+..|.....++ ............-..+++|++|++++|.++ .+|. .++.+++|++|+|
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----CCEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEES-EECTHHHHHCCCCSEEEC
T ss_pred cCCCCCccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchh-hCChhHhcccccCcEEEC
Confidence 678998888885 5555553222121 222222222223345688888888888887 4554 4677888888888
Q ss_pred cCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcchhhhhhccCcccccc
Q 001908 130 ANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQFSGT 209 (997)
Q Consensus 130 s~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ 209 (997)
++|.+++..|..++.+++| ++|+|++|.+++ .
T Consensus 77 ~~n~i~~~~~~~~~~l~~L-------------------------~~L~L~~n~l~~-----------------------~ 108 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTI-------------------------QKLYMGFNAIRY-----------------------L 108 (390)
T ss_dssp TTSCCCEECTTTTTTCTTC-------------------------CEEECCSSCCCC-----------------------C
T ss_pred CCCcccccChhhccCCCCc-------------------------CEEECCCCCCCc-----------------------C
Confidence 8888875545566555544 455665555543 3
Q ss_pred CCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccc
Q 001908 210 VPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGR 289 (997)
Q Consensus 210 ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 289 (997)
.|..+.++++|++|+|++|+++ .+|..++..+++|++|++++|.+++..|..|..+++|++|+|++|++++.. ++.
T Consensus 109 ~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~ 184 (390)
T 3o6n_A 109 PPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSL 184 (390)
T ss_dssp CTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGG
T ss_pred CHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---ccc
Confidence 3455667778888888888887 677777667888888888888888777777888888888888888887652 455
Q ss_pred cCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCC
Q 001908 290 LKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNL 369 (997)
Q Consensus 290 l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l 369 (997)
+++|+.|++++|.++.+ ....+|++|++++|.+. .. |.. ..
T Consensus 185 l~~L~~L~l~~n~l~~~-----------~~~~~L~~L~l~~n~l~-------------------------~~-~~~--~~ 225 (390)
T 3o6n_A 185 IPSLFHANVSYNLLSTL-----------AIPIAVEELDASHNSIN-------------------------VV-RGP--VN 225 (390)
T ss_dssp CTTCSEEECCSSCCSEE-----------ECCSSCSEEECCSSCCC-------------------------EE-ECC--CC
T ss_pred ccccceeeccccccccc-----------CCCCcceEEECCCCeee-------------------------ec-ccc--cc
Confidence 66667777776666532 12234555555554443 22 211 12
Q ss_pred CCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEec
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNL 449 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (997)
++|+.|++++|++++. ..+..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 5677777777777753 456677777777777777776667777777777777777777764 4555566666666666
Q ss_pred CCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccc
Q 001908 450 SDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529 (997)
Q Consensus 450 ~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (997)
++|++. .+ |..+..+++|+.|++++|++++ +| +..+++|+.|++++|+++.
T Consensus 303 ~~n~l~-~~-------------------------~~~~~~l~~L~~L~L~~N~i~~-~~--~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 303 SHNHLL-HV-------------------------ERNQPQFDRLENLYLDHNSIVT-LK--LSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CSSCCC-CC-------------------------GGGHHHHTTCSEEECCSSCCCC-CC--CCTTCCCSEEECCSSCEEH
T ss_pred CCCcce-ec-------------------------CccccccCcCCEEECCCCccce-eC--chhhccCCEEEcCCCCccc
Confidence 666654 33 3344455566666666666653 22 5566677777777777764
No 173
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.8e-37 Score=345.42 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=180.6
Q ss_pred hcCcc---CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSS---SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~---~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++ .+.||+|+||+||+|+++.+++.||||++... ....+.+|+++++.+. ||||+++++++ .+..
T Consensus 8 ~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~-----~~~~ 79 (325)
T 3kn6_A 8 QHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVF-----HDQL 79 (325)
T ss_dssp HHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEE-----ECSS
T ss_pred hccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEE-----EcCC
Confidence 34544 37899999999999999999999999998643 3356788999999997 99999999995 4456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC---cEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---VAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---~~kl 831 (997)
..++||||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++ .+||
T Consensus 80 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl 150 (325)
T 3kn6_A 80 HTFLVMELLNGGELFERIKKKK------HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKI 150 (325)
T ss_dssp EEEEEECCCCSCBHHHHHHHCS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEE
T ss_pred EEEEEEEccCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEE
Confidence 8999999999999999998764 488999999999999999999999 999999999999998766 8999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+.... .........||+.|+|||++. +..++.++||||+||++|||++|+.||.
T Consensus 151 ~Dfg~a~~~~~--------~~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwslG~il~~ll~g~~pf~ 210 (325)
T 3kn6_A 151 IDFGFARLKPP--------DNQPLKTPCFTLHYAAPELLN------------QNGYDESCDLWSLGVILYTMLSGQVPFQ 210 (325)
T ss_dssp CCCTTCEECCC------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC
T ss_pred eccccceecCC--------CCCcccccCCCcCccCHHHhc------------CCCCCCccchHHHHHHHHHHHhCCCCCC
Confidence 99999975422 112223456899999996653 5678999999999999999999999997
Q ss_pred cCcCC--CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 912 CMFQG--GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 912 ~~~~~--~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
..... .....+........ .. . ...........++.+++.+||..||++|||++|++
T Consensus 211 ~~~~~~~~~~~~~~~~~i~~~--------~~----~--~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell 269 (325)
T 3kn6_A 211 SHDRSLTCTSAVEIMKKIKKG--------DF----S--FEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269 (325)
T ss_dssp -------CCCHHHHHHHHTTT--------CC----C--CCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred CCccccccccHHHHHHHHHcC--------CC----C--CCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence 54321 11112221111100 00 0 00011223456788999999999999999999886
No 174
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6.4e-37 Score=350.59 Aligned_cols=255 Identities=20% Similarity=0.303 Sum_probs=191.0
Q ss_pred hcCccC-CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhh-cCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSS-NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRN-TRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|.+. +.||+|+||+||+|+++.+++.||||+++.. ..+.+|++++.+ .+||||+++++++... +.+....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~-~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeec-ccCCcEE
Confidence 456665 6899999999999999999999999998632 456788888754 5899999999987532 2345679
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~D 833 (997)
|+||||+++|+|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~D 207 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD----QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 207 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-------CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECC
T ss_pred EEEEEeCCCCcHHHHHHHhCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEe
Confidence 999999999999999987542 2489999999999999999999999 9999999999999998 78999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... .......+||+.|+|||++ .+..++.++|||||||++|||++|+.||...
T Consensus 208 FG~a~~~~~---------~~~~~~~~gt~~y~aPE~~------------~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 266 (400)
T 1nxk_A 208 FGFAKETTS---------HNSLTTPCYTPYYVAPEVL------------GPEKYDKSCDMWSLGVIMYILLCGYPPFYSN 266 (400)
T ss_dssp CTTCEECC--------------------CTTCCGGGS------------CCCCSSSHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred cccccccCC---------CCccccCCCCCCccCHhhc------------CCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence 999986421 1122346789999999655 3577899999999999999999999999754
Q ss_pred cCCCc--cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGL--TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..... .......... .....+ ....+..++.+++.+||..||++|||+.|+++.
T Consensus 267 ~~~~~~~~~~~~i~~~~----~~~~~~-------------~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 267 HGLAISPGMKTRIRMGQ----YEFPNP-------------EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp TTCSSCCSHHHHHHHTC----CCCCTT-------------TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ccccccHHHHHHHHcCc----ccCCCc-------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 32211 1111111000 000000 001234567899999999999999999999863
No 175
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.5e-37 Score=349.24 Aligned_cols=278 Identities=21% Similarity=0.263 Sum_probs=206.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|++++++++||||+++++++...........
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 46899999999999999999999999999999999743 33445788999999999999999999999876554555679
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ |+|.+++.... +++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 106 ~iv~e~~~-~~L~~~l~~~~-------~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 174 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQH-------LSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGL 174 (364)
T ss_dssp EEEEECCS-EEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEcccC-cCHHHHHHhCC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcc
Confidence 99999996 59999998653 88999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+...... ..........||+.|+|||++.. +..++.++||||+||++|||++|+.||......
T Consensus 175 a~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~ 238 (364)
T 3qyz_A 175 ARVADPDH-----DHTGFLTEYVATRWYRAPEIMLN-----------SKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYL 238 (364)
T ss_dssp CEECCGGG-----CBCCTTCCCCSCGGGCCHHHHHT-----------BCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGG
T ss_pred eEecCCCC-----CccccccccccccCCCCCHHhcC-----------CCCCCcchhHHHHHHHHHHHHHCCCCCCCCChH
Confidence 98653211 11112234579999999987642 345789999999999999999999999754221
Q ss_pred CccHHHHHHhhc--chhhhhh-cCccc---ccccccch---hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMAL--PEKVMET-VDPSL---LLAWSDGR---RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~--~~~~~~~-~d~~~---~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. .+........ ....... .+... ........ ..........++.+++.+||..||++|||+.|+++
T Consensus 239 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 239 D-QLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp G-HHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1 1111111110 0000000 00000 00000000 00011123456889999999999999999999975
No 176
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=8.8e-37 Score=333.43 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=200.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||.||+|.++.+++.||+|++... .....+.+.+|++++++++||||+++++++. ..+.
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 79 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQ-----EESF 79 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEE-----cCCE
Confidence 46899999999999999999999999999999999643 3345577889999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc---EEEc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---AHVS 832 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~ 832 (997)
.++||||+++++|.+++.... .+++..+..++.|++.|++|||++ +|+||||||+||+++.++. +||+
T Consensus 80 ~~~v~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~ 150 (284)
T 3kk8_A 80 HYLVFDLVTGGELFEDIVARE------FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLA 150 (284)
T ss_dssp EEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEEC
T ss_pred EEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEe
Confidence 899999999999999988764 488999999999999999999999 9999999999999987665 9999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+..... ........||+.|+|||++. +..++.++||||+|+++|+|++|+.||..
T Consensus 151 Dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~l~~g~~pf~~ 209 (284)
T 3kk8_A 151 DFGLAIEVND---------SEAWHGFAGTPGYLSPEVLK------------KDPYSKPVDIWACGVILYILLVGYPPFWD 209 (284)
T ss_dssp CCTTCEECCS---------SCBCCCSCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred eceeeEEccc---------CccccCCCCCcCCcCchhhc------------CCCCCcccchHHHHHHHHHHHHCCCCCCC
Confidence 9999976522 11223357899999997654 46688999999999999999999999864
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+........ ......+. ...+++++.+++.+||+.||++|||+.|+++
T Consensus 210 ~~-----~~~~~~~~~~~-~~~~~~~~-------------~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 210 ED-----QHRLYAQIKAG-AYDYPSPE-------------WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp SS-----HHHHHHHHHHT-CCCCCTTT-------------TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred Cc-----hhHHHHHHHhc-cccCCchh-------------hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 21 11111111000 00000000 0122456789999999999999999999976
No 177
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.7e-37 Score=339.64 Aligned_cols=258 Identities=21% Similarity=0.315 Sum_probs=199.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.+.|++.+.||+|+||+||+|++..+++.||+|++........+.+.+|++++++++||||+++++++. ..+..+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~~ 92 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY-----HDGKLW 92 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CC-CEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeee-----eCCeEE
Confidence 467999999999999999999999899999999998666666788999999999999999999999964 345899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++..... .+++..++.++.|++.||.|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 93 lv~e~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 164 (302)
T 2j7t_A 93 IMIEFCPGGAVDAIMLELDR-----GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVS 164 (302)
T ss_dssp EEEECCTTEEHHHHHHHHTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHH
T ss_pred EEEEeCCCCcHHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCC
Confidence 99999999999999876431 388999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
..... .........||+.|+|||.+.. +...+..++.++|||||||++|||++|+.||....
T Consensus 165 ~~~~~--------~~~~~~~~~~~~~y~aPE~~~~-------~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--- 226 (302)
T 2j7t_A 165 AKNLK--------TLQKRDSFIGTPYWMAPEVVMC-------ETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--- 226 (302)
T ss_dssp HHHHH--------HHHC-----CCGGGCCHHHHHH-------HHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSC---
T ss_pred ccccc--------cccccccccCChhhcCCeeecc-------ccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCC---
Confidence 65311 1112233568999999988753 22235678899999999999999999999987432
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+..... .....+.. ..+..++..+.+++.+||+.||++|||+.|+++
T Consensus 227 --~~~~~~~~-----~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 227 --PMRVLLKI-----AKSDPPTL----------LTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --HHHHHHHH-----HHSCCCCC----------SSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --HHHHHHHH-----hccCCccc----------CCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 11111110 00000100 001123456789999999999999999999975
No 178
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.6e-37 Score=339.39 Aligned_cols=252 Identities=21% Similarity=0.257 Sum_probs=201.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||.||+|++..+++.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 85 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYE----- 85 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEe-----
Confidence 4679999999999999999999999999999999974322 13577899999999999999999999954
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC----
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---- 827 (997)
.....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 86 ~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~ 156 (321)
T 2a2a_A 86 NRTDVVLILELVSGGELFDFLAQKE------SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIP 156 (321)
T ss_dssp CSSEEEEEECCCCSCBHHHHHHTCS------CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSC
T ss_pred cCCEEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcC
Confidence 4568999999999999999998653 478899999999999999999999 999999999999999888
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||+++..... .......||+.|+|||++. +..++.++|||||||++|||++|+
T Consensus 157 ~~kl~Dfg~~~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~ 215 (321)
T 2a2a_A 157 HIKLIDFGLAHEIEDG---------VEFKNIFGTPEFVAPEIVN------------YEPLGLEADMWSIGVITYILLSGA 215 (321)
T ss_dssp CEEECCCTTCEECCTT---------CCCCCCCSCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSC
T ss_pred CEEEccCccceecCcc---------ccccccCCCCCccCccccc------------CCCCCCccccHHHHHHHHHHHHCC
Confidence 8999999999765221 1123456899999997654 467889999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.||.... ..+......... ...++ ......+..+.+++.+||..||++|||+.|+++
T Consensus 216 ~pf~~~~-----~~~~~~~i~~~~--~~~~~------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 216 SPFLGDT-----KQETLANITSVS--YDFDE------------EFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp CSSCCSS-----HHHHHHHHHTTC--CCCCH------------HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CCCCCCC-----HHHHHHHHHhcc--cccCh------------hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 9986431 111111110000 00000 111123456789999999999999999999976
No 179
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3e-37 Score=348.95 Aligned_cols=251 Identities=27% Similarity=0.334 Sum_probs=190.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHH-HhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEV-LRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||+||+|+.+.+++.||||+++... ......+.+|..+ ++.++||||+++++++ ...
T Consensus 37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~-----~~~ 111 (373)
T 2r5t_A 37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF-----QTA 111 (373)
T ss_dssp GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE-----ECS
T ss_pred hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE-----EeC
Confidence 367999999999999999999999999999999996432 2334566777776 5778999999999984 456
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..|+||||+++|+|.+++.+.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.+|++||+|
T Consensus 112 ~~~~lv~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~D 182 (373)
T 2r5t_A 112 DKLYFVLDYINGGELFYHLQRER------CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTD 182 (373)
T ss_dssp SEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECC
T ss_pred CEEEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEee
Confidence 68999999999999999998754 478889999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+..... .......+||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 183 FG~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~G~~Pf~~~ 242 (373)
T 2r5t_A 183 FGLCKENIEH--------NSTTSTFCGTPEYLAPEVLH------------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSR 242 (373)
T ss_dssp CCBCGGGBCC--------CCCCCSBSCCCCCCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred CccccccccC--------CCccccccCCccccCHHHhC------------CCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence 9999864221 12234468999999997664 467899999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKL 985 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L 985 (997)
...+......... .... ......+.+++.+||..||++||++.+.++.+
T Consensus 243 -----~~~~~~~~i~~~~------~~~~------------~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 243 -----NTAEMYDNILNKP------LQLK------------PNITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp -----BHHHHHHHHHHSC------CCCC------------SSSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred -----CHHHHHHHHHhcc------cCCC------------CCCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 1222211111100 0000 01234677999999999999999986544433
No 180
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2e-37 Score=337.68 Aligned_cols=249 Identities=25% Similarity=0.378 Sum_probs=198.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
+.++|++.+.||+|+||+||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++. ..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 81 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH-----DA 81 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CS
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe-----cC
Confidence 3468999999999999999999999999999999986332 223567889999999999999999999954 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|
T Consensus 82 ~~~~lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~D 152 (279)
T 3fdn_A 82 TRVYLILEYAPLGTVYRELQKLS------KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIAD 152 (279)
T ss_dssp SEEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECS
T ss_pred CEEEEEEecCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEe
Confidence 68999999999999999998754 478999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||++..... .......||+.|+|||.+. +..++.++||||+|+++|||++|+.||...
T Consensus 153 fg~~~~~~~----------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 153 FGWSVHAPS----------SRRTDLCGTLDYLPPEMIE------------GRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp CCEESCC------------------CCCCTTCCHHHHT------------TCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ccccccCCc----------ccccccCCCCCccCHhHhc------------cCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 999865321 1223457899999997654 466788999999999999999999998732
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+...... . ..... +...+..+.+++.+||+.||++|||+.|+++.
T Consensus 211 -----~~~~~~~~~~-----~-~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 211 -----TYQETYKRIS-----R-VEFTF------------PDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -----SHHHHHHHHH-----H-TCCCC------------CTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -----cHHHHHHHHH-----h-CCCCC------------CCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 1111111110 0 00000 01124567799999999999999999999864
No 181
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.3e-38 Score=365.87 Aligned_cols=259 Identities=28% Similarity=0.423 Sum_probs=200.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.++||+|+||+||+|+++ .+..||||+++.... ..+.+.+|++++++++||||+++++++.. +..
T Consensus 182 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------~~~ 253 (452)
T 1fmk_A 182 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 253 (452)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred ChhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC------Cce
Confidence 3467889999999999999999997 457799999975432 34678999999999999999999998642 468
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.+++....+ ..+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 254 ~iv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~ 326 (452)
T 1fmk_A 254 YIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL 326 (452)
T ss_dssp EEEECCCTTCBHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCT
T ss_pred EEEehhhcCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCcc
Confidence 999999999999999985421 1478999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
|+...... ........+|..|+|||++. +..++.++|||||||++|||+| |+.||....
T Consensus 327 a~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~- 386 (452)
T 1fmk_A 327 ARLIEDNE-------YTARQGAKFPIKWTAPEAAL------------YGRFTIKSDVWSFGILLTELTTKGRVPYPGMV- 386 (452)
T ss_dssp TC---------------------CCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-
T ss_pred ceecCCCc-------eecccCCcccccccCHhHHh------------cCCCCccccHHhHHHHHHHHHhCCCCCCCCCC-
Confidence 98653211 11122345788999997665 4578999999999999999999 999987431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
..+...... .. .+.+.+..++..+.+++.+||+.||++|||+.++++.|+++..+
T Consensus 387 ----~~~~~~~i~-----~~------------~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~ 441 (452)
T 1fmk_A 387 ----NREVLDQVE-----RG------------YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 441 (452)
T ss_dssp ----HHHHHHHHH-----TT------------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred ----HHHHHHHHH-----cC------------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhcc
Confidence 111111110 00 00111224566788999999999999999999999999887543
No 182
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=373.22 Aligned_cols=256 Identities=23% Similarity=0.352 Sum_probs=199.3
Q ss_pred cccccCcceEEEEEEC--CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEEee
Q 001908 686 MIGQGSFGSVYKGILG--ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
+||+|+||+||+|.++ .++..||||+++.. .....+.+.+|++++++++||||++++++|.. +..++||||
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------~~~~lv~E~ 416 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------EALMLVMEM 416 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------SSEEEEEEC
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------CCeEEEEEe
Confidence 7999999999999875 35667999999754 33456789999999999999999999999742 358999999
Q ss_pred ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhccc
Q 001908 763 MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFA 842 (997)
Q Consensus 763 ~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~ 842 (997)
+++|+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 417 ~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~ 488 (613)
T 2ozo_A 417 AGGGPLHKFLVGKR-----EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGA 488 (613)
T ss_dssp CTTCBHHHHHTTCT-----TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-
T ss_pred CCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccC
Confidence 99999999997653 2488999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCccHH
Q 001908 843 RPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLTLH 921 (997)
Q Consensus 843 ~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~~~ 921 (997)
... .........+|+.|+|||++. +..++.++|||||||++|||+| |+.||..... ..+.
T Consensus 489 ~~~-----~~~~~~~~~~~~~y~APE~~~------------~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~ 549 (613)
T 2ozo_A 489 DDS-----YYTARSAGKWPLKWYAPECIN------------FRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG--PEVM 549 (613)
T ss_dssp ------------------CCTTSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCS--HHHH
T ss_pred CCc-----eeeeccCCCCccceeCHhhhc------------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHH
Confidence 111 111122334678999997764 4678999999999999999998 9999974321 1111
Q ss_pred HHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhhc
Q 001908 922 EFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLVG 994 (997)
Q Consensus 922 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~~ 994 (997)
+.+... .+...+..++.++.++|.+||..||++||++.++++.|+++..+...
T Consensus 550 ~~i~~~--------------------~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 550 AFIEQG--------------------KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp HHHHTT--------------------CCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred HHHHcC--------------------CCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 111100 00111224567889999999999999999999999999998876643
No 183
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=360.31 Aligned_cols=345 Identities=21% Similarity=0.200 Sum_probs=259.0
Q ss_pred hccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccC
Q 001908 200 HVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYF 279 (997)
Q Consensus 200 ~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 279 (997)
+.++++++ .+|..+. ++++.|+|++|++++ ++...+..+++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 17 ~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 17 LCHRKRFV-AVPEGIP--TETRLLDLGKNRIKT-LNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp ECCSCCCS-SCCSCCC--TTCSEEECCSSCCCE-ECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred EeCCCCcC-cCCCCCC--CCCcEEECCCCccce-ECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 33344443 4555553 467788888888874 4444445788888888888888888888888888888888888888
Q ss_pred CCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccc
Q 001908 280 TGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQIS 359 (997)
Q Consensus 280 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~ 359 (997)
++.++..|.++++|++|+|++|++..+.+ ..+.++++|++|++++|.+++
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~------~~~~~l~~L~~L~l~~n~l~~------------------------ 142 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLD------YMFQDLYNLKSLEVGDNDLVY------------------------ 142 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECT------TTTTTCTTCCEEEECCTTCCE------------------------
T ss_pred CccCcccccCCCCCCEEECCCCccccCCh------hHccccccCCEEECCCCccce------------------------
Confidence 88888888888888999998888876533 245667777777777776653
Q ss_pred cccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCC
Q 001908 360 GTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLG 439 (997)
Q Consensus 360 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 439 (997)
..|..|.++++|+.|+|++|++++..+..|.++++|+.|+|++|.+++..+..|..+++|+.|++++|.+.+.+|..+.
T Consensus 143 -~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~ 221 (477)
T 2id5_A 143 -ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL 221 (477)
T ss_dssp -ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTT
T ss_pred -eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccc
Confidence 3455666677778888888877766666677778888888888888777677777888888888888777777777666
Q ss_pred CCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccE
Q 001908 440 NCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEI 519 (997)
Q Consensus 440 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 519 (997)
...+|++|+|++|++++..+..+..+++| +.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|+.
T Consensus 222 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 300 (477)
T 2id5_A 222 YGLNLTSLSITHCNLTAVPYLAVRHLVYL-RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRV 300 (477)
T ss_dssp TTCCCSEEEEESSCCCSCCHHHHTTCTTC-CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCE
T ss_pred cCccccEEECcCCcccccCHHHhcCcccc-CeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCE
Confidence 66678888888888774433566677777 78888888888777778888899999999999999888889999999999
Q ss_pred EEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCC
Q 001908 520 FHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 520 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
|+|++|+|++..+..|..+++|+.|+|++|.+.+..+.. .-...+..+++.+|...+..|.
T Consensus 301 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~~-~~~~~~~~~~~~~~~~~C~~p~ 361 (477)
T 2id5_A 301 LNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRLL-WVFRRRWRLNFNRQQPTCATPE 361 (477)
T ss_dssp EECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGGH-HHHTTTTSSCCTTCCCBEEESG
T ss_pred EECCCCcCceeCHhHcCCCcccCEEEccCCCccCccchH-hHHhhhhccccCccCceeCCch
Confidence 999999999777778888999999999999987643321 1123344456667766665554
No 184
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=344.34 Aligned_cols=245 Identities=23% Similarity=0.356 Sum_probs=199.0
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
...++|++.+.||+|+||+||+|+++.+++.||||+++... ....+.+.+|++++++++||||+++++++
T Consensus 21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~-- 98 (335)
T 3dls_A 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIF-- 98 (335)
T ss_dssp HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEE--
T ss_pred ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE--
Confidence 34578999999999999999999999999999999997432 11334667899999999999999999995
Q ss_pred cCcCCCceEEEEEeeccCC-CHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC
Q 001908 748 IDFKGADFKALVYEYMQNG-SLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 826 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~ 826 (997)
...+..++||||+.+| +|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 99 ---~~~~~~~lv~e~~~~g~~l~~~~~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 166 (335)
T 3dls_A 99 ---ENQGFFQLVMEKHGSGLDLFAFIDRHP------RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAED 166 (335)
T ss_dssp ---ECSSEEEEEEECCTTSCBHHHHHHTCC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred ---eeCCEEEEEEEeCCCCccHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCC
Confidence 4466899999999777 9999998764 488999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC-CccchhHHHHHHHHHHHh
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA-SVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~-~~~~DvwSlGvvl~ellt 905 (997)
+.+||+|||+++..... .......||+.|+|||++. +..+ +.++|||||||++|||++
T Consensus 167 ~~~kL~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwslG~il~el~~ 225 (335)
T 3dls_A 167 FTIKLIDFGSAAYLERG---------KLFYTFCGTIEYCAPEVLM------------GNPYRGPELEMWSLGVTLYTLVF 225 (335)
T ss_dssp SCEEECCCTTCEECCTT---------CCBCEECSCGGGCCHHHHT------------TCCBCSHHHHHHHHHHHHHHHHH
T ss_pred CcEEEeecccceECCCC---------CceeccCCCccccChhhhc------------CCCCCCCcccchhHHHHHHHHHh
Confidence 99999999999865221 1223457999999997764 3444 789999999999999999
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
|+.||...... ......+ +..++.++.+++.+||..||++|||+.|+++.
T Consensus 226 g~~pf~~~~~~---------------~~~~~~~--------------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 226 EENPFCELEET---------------VEAAIHP--------------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SSCSCSSGGGG---------------TTTCCCC--------------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CCCchhhHHHH---------------HhhccCC--------------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 99999742110 0000000 00124567899999999999999999999874
No 185
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-36 Score=343.42 Aligned_cols=265 Identities=23% Similarity=0.354 Sum_probs=205.9
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhc-CCCCcceE
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNT-RHRNLIKI 741 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l-~h~niv~l 741 (997)
+.......++|++.+.||+|+||.||+|+++.+|+.||||+++... ....+.+.+|+++++++ +||||+++
T Consensus 86 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 165 (365)
T 2y7j_A 86 WAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITL 165 (365)
T ss_dssp HHHHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCE
T ss_pred chhhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEE
Confidence 3444556678999999999999999999998899999999986432 12245778999999999 79999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCe
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 821 (997)
++++. .....++||||+++++|.+++.... .+++..+..++.||+.||.|||+. +|+||||||+||
T Consensus 166 ~~~~~-----~~~~~~lv~e~~~g~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NI 231 (365)
T 2y7j_A 166 IDSYE-----SSSFMFLVFDLMRKGELFDYLTEKV------ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENI 231 (365)
T ss_dssp EEEEE-----BSSEEEEEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred EEEEe-----eCCEEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHE
Confidence 99854 3568999999999999999998654 488999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHH
Q 001908 822 LLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901 (997)
Q Consensus 822 ll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ 901 (997)
+++.++.+||+|||++...... .......||+.|+|||++..... .....++.++|||||||++|
T Consensus 232 l~~~~~~ikl~DfG~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~------~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 232 LLDDNMQIRLSDFGFSCHLEPG---------EKLRELCGTPGYLAPEILKCSMD------ETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp EECTTCCEEECCCTTCEECCTT---------CCBCCCCSCGGGCCHHHHHHTTC------TTSCCBCTTHHHHHHHHHHH
T ss_pred EECCCCCEEEEecCcccccCCC---------cccccCCCCCCccChhhcccccc------ccCcCCCchhhHHhHHHHHH
Confidence 9999999999999999765221 12234679999999998764211 11345888999999999999
Q ss_pred HHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 902 EMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 902 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
||++|+.||.... ........... .... ..+....++..+.+++.+||..||++|||+.|+
T Consensus 297 ell~g~~pf~~~~-----~~~~~~~i~~~----~~~~----------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~el 357 (365)
T 2y7j_A 297 TLLAGSPPFWHRR-----QILMLRMIMEG----QYQF----------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA 357 (365)
T ss_dssp HHHHSSCSSCCSS-----HHHHHHHHHHT----CCCC----------CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred HHHHCCCCCCCCC-----HHHHHHHHHhC----CCCC----------CCcccccCCHHHHHHHHHHcCCChhHCcCHHHH
Confidence 9999999986421 11111110000 0000 001111234568899999999999999999999
Q ss_pred HH
Q 001908 982 LA 983 (997)
Q Consensus 982 l~ 983 (997)
++
T Consensus 358 l~ 359 (365)
T 2y7j_A 358 LQ 359 (365)
T ss_dssp HH
T ss_pred hc
Confidence 86
No 186
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=1.8e-37 Score=337.18 Aligned_cols=246 Identities=28% Similarity=0.392 Sum_probs=178.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++. ..+.
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIK-----SKDE 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSSC
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEe-----cCCe
Confidence 5799999999999999999999989999999999643 2333567889999999999999999999954 4558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+ ++++.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~------~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRD------KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred EEEEehhc-CCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 99999999 778988887654 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
.++..... .......||+.|+|||++. +.. .+.++||||+||++|||++|+.||...
T Consensus 158 ~~~~~~~~---------~~~~~~~~t~~y~aPE~~~------------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~- 215 (275)
T 2eue_A 158 LSNIMTDG---------NFLKTSCGSPNYAAPEVIS------------GKLYAGPEVDVWSCGVILYVMLCRRLPFDDE- 215 (275)
T ss_dssp CC------------------------CTTCCHHHHC------------C-----THHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred cceeccCc---------ccccCCCCCcCcCCceeee------------CCCCCCcccchHHHHHHHHHHHhCCCCCCCC-
Confidence 99765221 1223356899999997764 233 368999999999999999999998742
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
............ . ... +..+...+.+++.+||+.||++|||+.|+++
T Consensus 216 ----~~~~~~~~~~~~-----~-~~~------------~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 216 ----SIPVLFKNISNG-----V-YTL------------PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ----SHHHHHHHHHHT-----C-CCC------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ----CHHHHHHHHHhC-----C-CCC------------CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 122211111000 0 000 0112456789999999999999999999975
No 187
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8.9e-37 Score=359.53 Aligned_cols=253 Identities=24% Similarity=0.289 Sum_probs=199.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..++|++.++||+|+||+||+|+++.+++.||||++... .......+.+|++++++++||||+++++++. ...
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~ 94 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DSS 94 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----CSS
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEE-----cCC
Confidence 456899999999999999999999999999999998632 2334578899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC---CCCcEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD---HDMVAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~---~~~~~kl 831 (997)
..++||||+++|+|.+++.... .+++..++.++.||+.||.|||++ +|+||||||+||+++ .++.+||
T Consensus 95 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 165 (486)
T 3mwu_A 95 SFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKI 165 (486)
T ss_dssp EEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEE
T ss_pred EEEEEEEcCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEE
Confidence 8999999999999999998754 488999999999999999999999 999999999999995 5568999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+.... ........||+.|+|||++. +.++.++||||+||++|+|++|+.||.
T Consensus 166 ~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~-------------~~~~~~~DiwslG~il~~ll~g~~pf~ 223 (486)
T 3mwu_A 166 IDFGLSTCFQQ---------NTKMKDRIGTAYYIAPEVLR-------------GTYDEKCDVWSAGVILYILLSGTPPFY 223 (486)
T ss_dssp CSCSCTTTBCC---------C----CCTTGGGGCCGGGGG-------------SCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EECCcCeECCC---------CCccCCCcCCCCCCCHHHhC-------------CCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 99999976522 11223457999999998764 348899999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... ..+.......... .... +.......++.+++.+||..||++|||+.|+++.
T Consensus 224 ~~~-----~~~~~~~i~~~~~-~~~~-------------~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 224 GKN-----EYDILKRVETGKY-AFDL-------------PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSS-----HHHHHHHHHHTCC-CSCS-------------GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCC-----HHHHHHHHHhCCC-CCCC-------------cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 431 1111111100000 0000 0111234567899999999999999999999863
No 188
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=5.1e-38 Score=349.95 Aligned_cols=271 Identities=23% Similarity=0.382 Sum_probs=209.3
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEEC-----CCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeee
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILG-----ENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCS 746 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~-----~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~ 746 (997)
++....++|++.+.||+|+||.||+|+++ .+++.||||++... .......+.+|++++++++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 44456688999999999999999999876 35788999999743 3344567899999999999999999999953
Q ss_pred ccCcCCCceEEEEEeeccCCCHHHHhhcCCC----CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCee
Q 001908 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNG----QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVL 822 (997)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~----~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIl 822 (997)
..+..++||||+++|+|.+++..... ......+++..+++++.|++.||+|||++ +|+||||||+||+
T Consensus 99 -----~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIl 170 (322)
T 1p4o_A 99 -----QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCM 170 (322)
T ss_dssp -----SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEE
T ss_pred -----cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEE
Confidence 45578999999999999999986321 01112468899999999999999999999 9999999999999
Q ss_pred eCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 823 LDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 823 l~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
++.++.+||+|||+++...... .........+|+.|+|||++. +..++.++||||+||++||
T Consensus 171 i~~~~~~kl~Dfg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~e 232 (322)
T 1p4o_A 171 VAEDFTVKIGDFGMTRDIYETD------YYRKGGKGLLPVRWMSPESLK------------DGVFTTYSDVWSFGVVLWE 232 (322)
T ss_dssp ECTTCCEEECCTTCCCGGGGGG------CEEGGGSSEECGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHH
T ss_pred EcCCCeEEECcCcccccccccc------ccccccCCCCCCCccChhhhc------------cCCCCchhhHHHHHHHHHH
Confidence 9999999999999997652211 111223345788999997765 4568899999999999999
Q ss_pred HHh-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 903 MFT-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 903 llt-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
|++ |+.||.... ..+.......... +. .+..++..+.+++.+||..||++|||+.|+
T Consensus 233 l~~~g~~p~~~~~-----~~~~~~~~~~~~~-----~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~e~ 290 (322)
T 1p4o_A 233 IATLAEQPYQGLS-----NEQVLRFVMEGGL-----LD------------KPDNCPDMLFELMRMCWQYNPKMRPSFLEI 290 (322)
T ss_dssp HHHTSCCTTTTSC-----HHHHHHHHHTTCC-----CC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHH
T ss_pred HHhcCCCccccCC-----HHHHHHHHHcCCc-----CC------------CCCCCCHHHHHHHHHHcCCCcccCcCHHHH
Confidence 999 889986431 1221111110000 00 011235568899999999999999999999
Q ss_pred HHHHHHHHHH
Q 001908 982 LAKLCAARQT 991 (997)
Q Consensus 982 l~~L~~~~~~ 991 (997)
++.|+++...
T Consensus 291 l~~L~~~~~~ 300 (322)
T 1p4o_A 291 ISSIKEEMEP 300 (322)
T ss_dssp HHHHGGGSCT
T ss_pred HHHHHHhhcc
Confidence 9999876543
No 189
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.7e-37 Score=332.83 Aligned_cols=255 Identities=21% Similarity=0.294 Sum_probs=201.8
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..++|++.+.||+|+||.||+|+++.+++.||||+++.. .....+.+.+|+++++.++||||+++++++. ..+.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 79 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRR-----EGNI 79 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEE-----cCCE
Confidence 346899999999999999999999989999999999643 2344578899999999999999999999964 3558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 80 QYLFLEYCSGGELFDRIEPDI------GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp EEEEEECCTTEEGGGGSBTTT------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEEEEecCCCcHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 899999999999999987643 478999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
.+....... .........||+.|+|||.+. +.. ++.++|||||||++|||++|+.||....
T Consensus 151 ~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 151 LATVFRYNN------RERLLNKMCGTLPYVAPELLK------------RREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp TCEECEETT------EECCBCCCCSCGGGCCGGGGT------------CSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred CccccCCCc------chhcccCCccccCccChHHHh------------cCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 997652211 111223457899999997664 333 3678999999999999999999998543
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........+..... ... .....+..+.+++.+||..||++|||+.|+++
T Consensus 213 ~~~~~~~~~~~~~~------~~~--------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 213 DSCQEYSDWKEKKT------YLN--------------PWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTSHHHHHHHTTCT------TST--------------TGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hHHHHHHHhhhccc------ccC--------------chhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 33222222211000 000 00122456779999999999999999999875
No 190
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=7.4e-37 Score=355.62 Aligned_cols=247 Identities=27% Similarity=0.379 Sum_probs=199.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|.+.+.||+|+||.||+|++..+|+.||||+++... ......+.+|+++++.++||||+++++++. ..+.
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~-----~~~~ 90 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS-----TPSD 90 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE-----ECCE
Confidence 57899999999999999999999999999999996432 233567899999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++|+|.+++.+.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG 161 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKNG------RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 161 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSSS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred EEEEEeCCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEecc
Confidence 999999999999999998654 488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
+|+.... .......+||+.|+|||++. +.. .+.++||||+||++|||++|+.||....
T Consensus 162 ~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~ 220 (476)
T 2y94_A 162 LSNMMSD---------GEFLRTSCGSPNYAAPEVIS------------GRLYAGPEVDIWSSGVILYALLCGTLPFDDDH 220 (476)
T ss_dssp SCEECCT---------TCCBCCCCSCSTTCCHHHHT------------TCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred chhhccc---------cccccccCCCcCeEChhhcc------------CCCCCCCcceehhhHHHHHHHhhCCCCCCCCC
Confidence 9986522 11223457999999997765 333 3689999999999999999999997431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.......... .. +.....++.+++.+||..||++|||+.|+++
T Consensus 221 -----~~~~~~~i~~~~~---~~---------------p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 221 -----VPTLFKKICDGIF---YT---------------PQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -----SHHHHHHHHTTCC---CC---------------CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----HHHHHHHHhcCCc---CC---------------CccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 1111111100000 00 0112346789999999999999999999986
No 191
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.3e-37 Score=345.27 Aligned_cols=270 Identities=21% Similarity=0.257 Sum_probs=201.5
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-----chhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-----QKGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
++....++|++.+.||+|+||+||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~- 98 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYE- 98 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEE-
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhc-
Confidence 4566778999999999999999999999999999999998633 2345678899999999999999999999954
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCC----------------------------------CcCCCCHHHHHHHH
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQP----------------------------------EVCDLSLIQRLNIA 793 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~----------------------------------~~~~~~~~~~~~i~ 793 (997)
..+..++||||+++|+|.+++....... ....+++..++.++
T Consensus 99 ----~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 174 (345)
T 3hko_A 99 ----DEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM 174 (345)
T ss_dssp ----CSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH
T ss_pred ----cCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH
Confidence 4568999999999999999996321100 00113567788999
Q ss_pred HHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC--cEEEcccccchhcccCCCCCccccccccccccccccccCCcchh
Q 001908 794 IDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM--VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIA 871 (997)
Q Consensus 794 ~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~--~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~ 871 (997)
.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+|+....... ..........||+.|+|||++.
T Consensus 175 ~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~ 247 (345)
T 3hko_A 175 RQIFSALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNN----GEYYGMTTKAGTPYFVAPEVLN 247 (345)
T ss_dssp HHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTC----C--------CCCGGGCCHHHHT
T ss_pred HHHHHHHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCc----cccccccccCCCccccCchhhc
Confidence 9999999999999 999999999999998777 899999999986532111 1111233457999999998764
Q ss_pred cccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhh
Q 001908 872 KMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRA 951 (997)
Q Consensus 872 ~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~ 951 (997)
. ....++.++|||||||++|||++|+.||.... ..+.......... ....+
T Consensus 248 ~----------~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-----~~~~~~~~~~~~~-~~~~~------------- 298 (345)
T 3hko_A 248 T----------TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVN-----DADTISQVLNKKL-CFENP------------- 298 (345)
T ss_dssp C----------SSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSS-----HHHHHHHHHHCCC-CTTSG-------------
T ss_pred c----------CCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----hHHHHHHHHhccc-ccCCc-------------
Confidence 2 12568889999999999999999999997432 1111111110000 00000
Q ss_pred hHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 952 KVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 952 ~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........+.+++.+||..||++||++.|+++
T Consensus 299 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 299 NYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 01123456789999999999999999999986
No 192
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=5.6e-37 Score=340.75 Aligned_cols=279 Identities=18% Similarity=0.211 Sum_probs=209.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||.||+|+...+++.||||++........+.+.+|+++++.++||||+++++++... .......+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE-RGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE-ETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec-cCCCceeE
Confidence 46899999999999999999999889999999999766666678899999999999999999999997532 12345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++...... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.+
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~ 181 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDK--GNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSM 181 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSC
T ss_pred EEEEeCCCCcHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcc
Confidence 999999999999999874211 12488999999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCc-cccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 838 RFLFARPFDTS-METQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
........... ...........||+.|+|||.+... ....++.++|||||||++|||++|+.||......
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~ 252 (317)
T 2buj_A 182 NQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQ---------SHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK 252 (317)
T ss_dssp EESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCC---------SEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT
T ss_pred hhcccccccccccccccccccccCCcccCCHhHhccC---------CCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc
Confidence 75421100000 0000111234579999999876421 1123688999999999999999999998643222
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
........... .. .+....++.++.+++.+||+.||++|||+.|+++.|+++.+.
T Consensus 253 ~~~~~~~~~~~--------~~------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~ 307 (317)
T 2buj_A 253 GDSVALAVQNQ--------LS------------IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPP 307 (317)
T ss_dssp TSCHHHHHHCC----------------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCC
T ss_pred cchhhHHhhcc--------CC------------CCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCC
Confidence 22222111100 00 000012245688999999999999999999999999987653
No 193
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=347.65 Aligned_cols=276 Identities=18% Similarity=0.231 Sum_probs=201.5
Q ss_pred hhcCccCCcccccCcceEEEEEECC---CCcEEEEEEecccchh-----------hHHHHHHHHHHHhhcCCCCcceEEe
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE---NGTFVAVKILNLMQKG-----------ALKSFVAECEVLRNTRHRNLIKIIT 743 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~l~~ 743 (997)
.++|++.+.||+|+||+||+|++.. ++..||+|++...... ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999986 7889999998743221 1234667888999999999999999
Q ss_pred eeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
++... +.+....++||||+ +++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 116 ~~~~~-~~~~~~~~lv~e~~-~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 184 (345)
T 2v62_A 116 SGLTE-FKGRSYRFMVMERL-GIDLQKISGQNG------TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLL 184 (345)
T ss_dssp EEEEE-SSSCEEEEEEEECE-EEEHHHHCBGGG------BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred ccccc-cCCCcEEEEEEecc-CCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEE
Confidence 97653 24467899999999 999999998754 488999999999999999999999 99999999999999
Q ss_pred CCCC--cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHH
Q 001908 824 DHDM--VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLL 901 (997)
Q Consensus 824 ~~~~--~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ 901 (997)
+.++ .+||+|||+|+......... ...........||+.|+|||++. +..++.++|||||||++|
T Consensus 185 ~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~ 251 (345)
T 2v62_A 185 GYKNPDQVYLADYGLSYRYCPNGNHK-QYQENPRKGHNGTIEFTSLDAHK------------GVALSRRSDVEILGYCML 251 (345)
T ss_dssp ESSSTTSEEECCCTTCEESSGGGCCC-CCCCCGGGCSCSCTTTCCHHHHH------------TCCCCHHHHHHHHHHHHH
T ss_pred ccCCCCcEEEEeCCCceecccccccc-cchhccccccCCCccccCHHHhc------------CCCCCchhhHHHHHHHHH
Confidence 9887 99999999998763221110 01112224467999999997664 457899999999999999
Q ss_pred HHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 902 EMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 902 elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
||++|+.||............... .......+....... ...++.++.+++..||..||++||++.++
T Consensus 252 ell~g~~pf~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~l 319 (345)
T 2v62_A 252 RWLCGKLPWEQNLKDPVAVQTAKT-----NLLDELPQSVLKWAP-------SGSSCCEIAQFLVCAHSLAYDEKPNYQAL 319 (345)
T ss_dssp HHHHSSCTTGGGTTCHHHHHHHHH-----HHHHTTTHHHHHHSC-------TTSCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHhCCCCccccccccHHHHHHHH-----hhcccccHHHHhhcc-------ccccHHHHHHHHHHHhhcCcccCCCHHHH
Confidence 999999999643222111111111 111111111000000 00235578899999999999999999999
Q ss_pred HHHHHHHH
Q 001908 982 LAKLCAAR 989 (997)
Q Consensus 982 l~~L~~~~ 989 (997)
++.|++..
T Consensus 320 ~~~L~~~~ 327 (345)
T 2v62_A 320 KKILNPHG 327 (345)
T ss_dssp HHHHCTTC
T ss_pred HHHHhccC
Confidence 99998654
No 194
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.1e-36 Score=344.74 Aligned_cols=209 Identities=26% Similarity=0.353 Sum_probs=177.0
Q ss_pred CccChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-----CCCcceE
Q 001908 667 PMVSYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-----HRNLIKI 741 (997)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~l 741 (997)
..+++.+.....++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+..|+++++.++ ||||+++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3345555556678999999999999999999999989999999999743 334466788999999986 9999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCe
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 821 (997)
++++.. .+..++||||+ +++|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+||
T Consensus 102 ~~~~~~-----~~~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NI 168 (360)
T 3llt_A 102 HGKFMY-----YDHMCLIFEPL-GPSLYEIITRNNYN----GFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENI 168 (360)
T ss_dssp EEEEEE-----TTEEEEEECCC-CCBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGE
T ss_pred cceeeE-----CCeeEEEEcCC-CCCHHHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccE
Confidence 999653 45899999999 99999999876522 488999999999999999999999 999999999999
Q ss_pred eeCC-------------------------CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhccccc
Q 001908 822 LLDH-------------------------DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNL 876 (997)
Q Consensus 822 ll~~-------------------------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~ 876 (997)
+++. ++.+||+|||+|+.... ......||+.|+|||++.
T Consensus 169 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~----- 232 (360)
T 3llt_A 169 LLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSD-----------YHGSIINTRQYRAPEVIL----- 232 (360)
T ss_dssp EESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTS-----------CCCSCCSCGGGCCHHHHT-----
T ss_pred EEccccccccccchhcccccccccccccCCCCEEEEeccCceecCC-----------CCcCccCcccccCcHHHc-----
Confidence 9975 88999999999975311 122457899999997654
Q ss_pred CccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 877 PCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 877 ~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+..++.++||||+||++|||++|+.||..
T Consensus 233 -------~~~~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 233 -------NLGWDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp -------TCCCCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred -------CCCCCCccchHHHHHHHHHHHHCCCCCCC
Confidence 56789999999999999999999999974
No 195
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.8e-37 Score=337.86 Aligned_cols=254 Identities=28% Similarity=0.382 Sum_probs=196.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.+.||+|+||+||+|++ +++.||||+++... ..+.+.+|++++++++||||+++++++. ...+..+
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~----~~~~~~~ 91 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIV----EEKGGLY 91 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEEC----CC--CCE
T ss_pred hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEE----cCCCceE
Confidence 46899999999999999999998 58899999997433 4467899999999999999999999863 2345789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++|+|.+++..... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||++
T Consensus 92 lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~ 164 (278)
T 1byg_A 92 IVTEYMAKGSLVDYLRSRGR----SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLT 164 (278)
T ss_dssp EEECCCTTEEHHHHHHHHHH----HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC-
T ss_pred EEEecCCCCCHHHHHHhccc----ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccc
Confidence 99999999999999986531 1267889999999999999999999 9999999999999999999999999998
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQG 916 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~ 916 (997)
+.... ......+++.|+|||.+. +..++.++||||||+++|||+| |+.||......
T Consensus 165 ~~~~~-----------~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~ 221 (278)
T 1byg_A 165 KEASS-----------TQDTGKLPVKWTAPEALR------------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK 221 (278)
T ss_dssp ----------------------CCTTTSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG
T ss_pred ccccc-----------cccCCCccccccCHHHhC------------CCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 75421 112235788999997765 3568899999999999999998 99998743211
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~ 991 (997)
....... ....+. .+..++..+.+++.+||+.||++||++.|+++.|+++...
T Consensus 222 --~~~~~~~--------~~~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~ 274 (278)
T 1byg_A 222 --DVVPRVE--------KGYKMD------------APDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTH 274 (278)
T ss_dssp --GHHHHHT--------TTCCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --HHHHHHh--------cCCCCC------------CcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhh
Confidence 1111100 000000 1112356788999999999999999999999999998764
No 196
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=8.2e-37 Score=339.23 Aligned_cols=278 Identities=21% Similarity=0.267 Sum_probs=197.8
Q ss_pred hcCccC-CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSS-NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
+.|++. +.||+|+||+||+|++..+++.||||+++.......+.+.+|++++.++ +||||+++++++. ..+..
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~-----~~~~~ 86 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFE-----EEDRF 86 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEe-----eCCEE
Confidence 467774 7899999999999999989999999999766555567889999999985 7999999999954 35689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc---EEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---AHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~D 833 (997)
++||||+++|+|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++. +||+|
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~D 157 (316)
T 2ac3_A 87 YLVFEKMRGGSILSHIHKRR------HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICD 157 (316)
T ss_dssp EEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECC
T ss_pred EEEEEcCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEE
Confidence 99999999999999998754 478999999999999999999999 9999999999999998876 99999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+++......... ...........||+.|+|||++..... ....++.++||||+||++|||++|+.||...
T Consensus 158 fg~~~~~~~~~~~~-~~~~~~~~~~~gt~~y~aPE~~~~~~~-------~~~~~~~~~DiwslG~il~~l~~g~~pf~~~ 229 (316)
T 2ac3_A 158 FDLGSGIKLNGDCS-PISTPELLTPCGSAEYMAPEVVEAFSE-------EASIYDKRCDLWSLGVILYILLSGYPPFVGR 229 (316)
T ss_dssp TTCCC--------------------CCSGGGCCHHHHHHTSH-------HHHHHTTTHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred ccCccccccCCccc-cccccccccccCCcCccChHHhhcccc-------cccCCCcccccHhHHHHHHHHHHCCCCCccc
Confidence 99997653211100 001112234569999999998753110 0134788999999999999999999999854
Q ss_pred cCCCccHHHHHH-hhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCK-MALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
............ ........+.+..... .+. .......+.++.+++.+||..||++|||+.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~----~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 230 CGSDCGWDRGEACPACQNMLFESIQEGKY-EFP----DKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp CCSCSCC----CCHHHHHHHHHHHHHCCC-CCC----HHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred ccccccccccccchhHHHHHHHHHhccCc-ccC----chhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 332211000000 0000000000000000 000 0011123457889999999999999999999986
No 197
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=2.7e-37 Score=344.83 Aligned_cols=266 Identities=24% Similarity=0.390 Sum_probs=202.2
Q ss_pred hhcCccCCcccccCcceEEEEE-----ECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGI-----LGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||.||+|+ ...+++.||||++... .......+.+|+.++++++||||+++++++.
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----- 103 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL----- 103 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEc-----
Confidence 4689999999999999999999 4457789999999643 3445678899999999999999999999954
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCC-cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CC
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPE-VCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DM 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~ 827 (997)
.....++||||+++|+|.+++........ ...+++..++.++.|++.||.|||++ +|+||||||+||+++. +.
T Consensus 104 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~ 180 (327)
T 2yfx_A 104 QSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGR 180 (327)
T ss_dssp SSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTC
T ss_pred CCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcc
Confidence 45578999999999999999997653221 23488999999999999999999999 9999999999999994 44
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-C
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-R 906 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g 906 (997)
.+||+|||+++....... ........||+.|+|||.+. +..++.++|||||||++|||+| |
T Consensus 181 ~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~ellt~g 242 (327)
T 2yfx_A 181 VAKIGDFGMARDIYRASY------YRKGGCAMLPVKWMPPEAFM------------EGIFTSKTDTWSFGVLLWEIFSLG 242 (327)
T ss_dssp CEEECCCHHHHHHHC------------CCGGGSCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTS
T ss_pred eEEECccccccccccccc------cccCCCcCCCcceeCHhHhc------------CCCCCchhhHHHHHHHHHHHHcCC
Confidence 699999999986532211 11223356789999997764 3568899999999999999998 9
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
+.||.... ..+........ ..+. .+..++..+.+++.+||+.||++||++.|+++.|+
T Consensus 243 ~~p~~~~~-----~~~~~~~~~~~-----~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 243 YMPYPSKS-----NQEVLEFVTSG-----GRMD------------PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp CCSSTTCC-----HHHHHHHHHTT-----CCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCCcC-----HHHHHHHHhcC-----CCCC------------CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 99986431 11111111000 0000 01123457889999999999999999999999999
Q ss_pred HHHHH
Q 001908 987 AARQT 991 (997)
Q Consensus 987 ~~~~~ 991 (997)
.+.++
T Consensus 301 ~~~~~ 305 (327)
T 2yfx_A 301 YCTQD 305 (327)
T ss_dssp HHHHC
T ss_pred HHhcC
Confidence 88764
No 198
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-36 Score=339.49 Aligned_cols=249 Identities=21% Similarity=0.281 Sum_probs=189.0
Q ss_pred hhcCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccc----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQ----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||.||+|+.. .+++.||+|+++... ......+.+|++++++++||||+++++++
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~----- 90 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF----- 90 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE-----
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE-----
Confidence 468999999999999999999984 588999999997432 23345678899999999999999999985
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
...+..++||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+|
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~k 161 (327)
T 3a62_A 91 QTGGKLYLILEYLSGGELFMQLEREG------IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVK 161 (327)
T ss_dssp ECSSCEEEEEECCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEE
T ss_pred EcCCEEEEEEeCCCCCcHHHHHHhCC------CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEE
Confidence 34568999999999999999998754 478889999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+++..... ........||+.|+|||++. +..++.++|||||||++|||++|+.||
T Consensus 162 l~Dfg~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~pf 221 (327)
T 3a62_A 162 LTDFGLCKESIHD--------GTVTHTFCGTIEYMAPEILM------------RSGHNRAVDWWSLGALMYDMLTGAPPF 221 (327)
T ss_dssp ECCCSCC------------------CTTSSCCTTSCHHHHT------------TSCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred EEeCCcccccccC--------CccccccCCCcCccCHhhCc------------CCCCCCcccchhHHHHHHHHHHCCCCC
Confidence 9999999754211 11223457999999997654 466889999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
.... ..+......... ... +.....++.+++.+||..||++|| ++.|+++
T Consensus 222 ~~~~-----~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 222 TGEN-----RKKTIDKILKCK------LNL------------PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp CCSS-----HHHHHHHHHHTC------CCC------------CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCC-----HHHHHHHHHhCC------CCC------------CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 7431 111111111000 000 011245678999999999999999 6777754
No 199
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=2.7e-37 Score=373.12 Aligned_cols=254 Identities=25% Similarity=0.325 Sum_probs=198.3
Q ss_pred CcccccCcceEEEEEE--CCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEEE
Q 001908 685 NMIGQGSFGSVYKGIL--GENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~--~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
++||+|+||+||+|.+ +.+++.||||+++... ....+.+.+|++++++++||||++++++|.. +..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~------~~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------ESWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES------SSEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCEEEEE
Confidence 4799999999999965 4567899999997432 3346789999999999999999999998742 3578999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+..
T Consensus 449 E~~~~g~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~ 519 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNR------HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519 (635)
T ss_dssp ECCTTEEHHHHHHHCT------TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHT
T ss_pred EccCCCCHHHHHhhCC------CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCcccc
Confidence 9999999999998654 488999999999999999999999 9999999999999999999999999999876
Q ss_pred ccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcCCCcc
Q 001908 841 FARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQGGLT 919 (997)
Q Consensus 841 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~~~~~ 919 (997)
..... .........+|+.|+|||++. +..++.++|||||||++|||++ |+.||....
T Consensus 520 ~~~~~-----~~~~~~~~~~t~~y~APE~~~------------~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~----- 577 (635)
T 4fl3_A 520 RADEN-----YYKAQTHGKWPVKWYAPECIN------------YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK----- 577 (635)
T ss_dssp TC------------------CGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCC-----
T ss_pred ccCcc-----ccccccCCCCceeeeChhhhc------------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC-----
Confidence 32211 111223345788999997764 4678999999999999999998 999997432
Q ss_pred HHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 920 LHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 920 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
..+....... ... ...+..++.++.+++..||+.||++||++.++++.|+++..++
T Consensus 578 ~~~~~~~i~~-----~~~------------~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~l 633 (635)
T 4fl3_A 578 GSEVTAMLEK-----GER------------MGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV 633 (635)
T ss_dssp HHHHHHHHHT-----TCC------------CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHc-----CCC------------CCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence 1111111100 000 0111234667889999999999999999999999999988765
No 200
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=8.6e-37 Score=359.40 Aligned_cols=254 Identities=24% Similarity=0.344 Sum_probs=202.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|+.+.+|+.||||++... .......+.+|++++++++||||+++++++ .+.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~ 257 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY-----ETKD 257 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSS
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE-----eeCC
Confidence 46799999999999999999999999999999999643 223456788999999999999999999984 4566
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..|+||||+++|+|.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+||
T Consensus 258 ~l~lVmEy~~gg~L~~~l~~~~~----~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DF 330 (576)
T 2acx_A 258 ALCLVLTLMNGGDLKFHIYHMGQ----AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDL 330 (576)
T ss_dssp EEEEEECCCCSCBHHHHHHSSSS----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEec
Confidence 89999999999999999987542 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... .......+||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 331 Gla~~~~~---------~~~~~~~~GT~~Y~APEvl~------------~~~~~~~~DiwSLGvilyeLltG~~PF~~~~ 389 (576)
T 2acx_A 331 GLAVHVPE---------GQTIKGRVGTVGYMAPEVVK------------NERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389 (576)
T ss_dssp TTCEECCT---------TCCEECCCSCGGGCCHHHHT------------TCEESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred ccceeccc---------CccccccCCCccccCHHHHc------------CCCCCccchHHHHHHHHHHHHhCCCCCcccc
Confidence 99986522 11223457999999997664 4668999999999999999999999998543
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
... ...+...... . ...... .....++.+++.+||..||++|| +++|+++
T Consensus 390 ~~~-~~~~i~~~i~-----~-~~~~~p------------~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 390 KKI-KREEVERLVK-----E-VPEEYS------------ERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp SCC-CHHHHHHHHH-----H-CCCCCC------------TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cch-hHHHHHHHhh-----c-ccccCC------------ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 221 1122111110 0 000100 11235678999999999999999 7788864
No 201
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.7e-37 Score=345.73 Aligned_cols=271 Identities=19% Similarity=0.282 Sum_probs=193.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchh-hHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKG-ALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.++||+|+||+||+|++..+++.||||+++..... ....+.+|++++++++||||+++++++. ..+..+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~~ 76 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIH-----TEKSLT 76 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEE-----CSSCEE
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEe-----eCCEEE
Confidence 4789999999999999999999989999999999643322 2224567999999999999999999954 456899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||++ |+|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|
T Consensus 77 lv~e~~~-~~l~~~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a 147 (324)
T 3mtl_A 77 LVFEYLD-KDLKQYLDDCGN-----IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLA 147 (324)
T ss_dssp EEEECCS-EEHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEE
T ss_pred EEecccc-cCHHHHHHhcCC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCccc
Confidence 9999996 599999987542 478899999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
+..... ........||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 148 ~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~- 207 (324)
T 3mtl_A 148 RAKSIP--------TKTYDNEVVTLWYRPPDILLG-----------STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE- 207 (324)
T ss_dssp ECC--------------------CGGGCCHHHHTT-----------CCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-
T ss_pred ccccCC--------ccccccccCcccccChhhhcC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-
Confidence 754211 112233568999999987642 245789999999999999999999999743211
Q ss_pred ccHHHHHHhh---cchhhhhhcCcc-cc----cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 918 LTLHEFCKMA---LPEKVMETVDPS-LL----LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 918 ~~~~~~~~~~---~~~~~~~~~d~~-~~----~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.......... ....+....... .. .................++.+++.+||+.||++|||+.|+++
T Consensus 208 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 208 EQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1111111110 000010000000 00 000000011111233456789999999999999999999975
No 202
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.5e-37 Score=335.70 Aligned_cols=261 Identities=24% Similarity=0.403 Sum_probs=205.5
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... ..+.+.+|++++++++||||+++++++. .+..
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~------~~~~ 82 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT------QEPI 82 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC------SSSC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc------CCCc
Confidence 3468999999999999999999986 677899999975432 3467899999999999999999999853 2358
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.... ...+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 83 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~ 155 (279)
T 1qpc_A 83 YIITEYMENGSLVDFLKTPS----GIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGL 155 (279)
T ss_dssp EEEEECCTTCBHHHHTTSHH----HHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCCCCHHHHHhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcc
Confidence 99999999999999997642 12488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
++...... ........++..|+|||.+. +..++.++|||||||++|||++ |+.||....
T Consensus 156 ~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~el~~~g~~p~~~~~- 215 (279)
T 1qpc_A 156 ARLIEDNE-------YTAREGAKFPIKWTAPEAIN------------YGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT- 215 (279)
T ss_dssp CEECSSSC-------EECCTTCCCCTTTSCHHHHH------------HCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC-
T ss_pred cccccCcc-------cccccCCCCccCccChhhhc------------cCCCCchhhhHHHHHHHHHHHhCCCCCCcccC-
Confidence 98653211 11222345688999997765 3567889999999999999999 899986431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~~ 993 (997)
..+..... .....+. .+..++.++.+++.+||..||++|||+.++++.|+++..+..
T Consensus 216 ----~~~~~~~~-----~~~~~~~------------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 272 (279)
T 1qpc_A 216 ----NPEVIQNL-----ERGYRMV------------RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTATE 272 (279)
T ss_dssp ----HHHHHHHH-----HTTCCCC------------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ----HHHHHHHH-----hcccCCC------------CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhcc
Confidence 11111111 0000000 011234578899999999999999999999999999887654
No 203
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=5.6e-37 Score=334.93 Aligned_cols=259 Identities=21% Similarity=0.364 Sum_probs=204.6
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-----
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF----- 750 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~----- 750 (997)
...++|++.+.||+|+||.||+|++..+++.||+|+++... +.+.+|++++++++||||+++++++...++
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 83 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC----
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccc
Confidence 34578999999999999999999999899999999997543 346689999999999999999998754221
Q ss_pred ------CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 751 ------KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 751 ------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
......++||||+++|+|.+++..... ..+++..++.++.|++.|+.|||++ +|+||||||+||+++
T Consensus 84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~ 156 (284)
T 2a19_B 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG----EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLV 156 (284)
T ss_dssp -----CCEEEEEEEEECCCCSCBHHHHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEE
T ss_pred cccccccCcceEEEEEeccCCCCHHHHHhhccC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEc
Confidence 124568999999999999999986531 2488999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.++.+||+|||.++..... .......||+.|+|||.+. +..++.++|||||||++|||+
T Consensus 157 ~~~~~kl~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~ 215 (284)
T 2a19_B 157 DTKQVKIGDFGLVTSLKND---------GKRTRSKGTLRYMSPEQIS------------SQDYGKEVDLYALGLILAELL 215 (284)
T ss_dssp ETTEEEECCCTTCEESSCC---------SCCCCCCSCCTTSCHHHHH------------CSCCCTHHHHHHHHHHHHHHH
T ss_pred CCCCEEECcchhheecccc---------ccccccCCcccccChhhhc------------cCCCcchhhhHHHHHHHHHHH
Confidence 9999999999999765321 1123346899999997664 456889999999999999999
Q ss_pred hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 905 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
+|..|+... ....... . +.... ..++..+.+++.+||..||++|||+.|+++.
T Consensus 216 ~~~~~~~~~-------~~~~~~~-----~---~~~~~------------~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~ 268 (284)
T 2a19_B 216 HVCDTAFET-------SKFFTDL-----R---DGIIS------------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRT 268 (284)
T ss_dssp SCCSSHHHH-------HHHHHHH-----H---TTCCC------------TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hcCCcchhH-------HHHHHHh-----h---ccccc------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999886421 1111000 0 00000 0123457789999999999999999999999
Q ss_pred HHHHHHHhh
Q 001908 985 LCAARQTLV 993 (997)
Q Consensus 985 L~~~~~~~~ 993 (997)
|..+.+...
T Consensus 269 l~~~~~~~~ 277 (284)
T 2a19_B 269 LTVWKKSPE 277 (284)
T ss_dssp HHHHTC---
T ss_pred HHHHhhCCC
Confidence 998876543
No 204
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-37 Score=339.27 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=203.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||.||+|+...+++.||+|++... .....+.+.+|++++++++||||+++++++.. .....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~~ 81 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID---RTNTT 81 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE---GGGTE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec---CCCce
Confidence 46899999999999999999999999999999999743 34456788999999999999999999998643 23567
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCC-----cEecCCCCCCeeeCCCCcEE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPP-----IVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~-----ivHrDlk~~NIll~~~~~~k 830 (997)
.++||||+++++|.+++..... ....+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+|
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~k 156 (279)
T 2w5a_A 82 LYIVMEYCEGGDLASVITKGTK--ERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVK 156 (279)
T ss_dssp EEEEEECCTTEEHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEE
T ss_pred EEEEEeCCCCCCHHHHHHhhcc--cCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEE
Confidence 9999999999999999986431 112488999999999999999999998 7 99999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||.++..... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||
T Consensus 157 l~dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~ 216 (279)
T 2w5a_A 157 LGDFGLARILNHD--------TSFAKTFVGTPYYMSPEQMN------------RMSYNEKSDIWSLGCLLYELCALMPPF 216 (279)
T ss_dssp ECCCCHHHHC-----------CHHHHHHHSCCTTCCHHHHH------------CC-CCHHHHHHHHHHHHHHHHHSSCSS
T ss_pred EecCchheeeccc--------cccccccCCCccccChHHhc------------cCCCCchhhHHHHHHHHHHHHHCCCCC
Confidence 9999999875221 11123356899999997764 456889999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLC 986 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~ 986 (997)
.... ..+..... .....+.. +..++.++.+++.+||+.||++||++.|+++.+.
T Consensus 217 ~~~~-----~~~~~~~i-----~~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 217 TAFS-----QKELAGKI-----REGKFRRI------------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp CCSS-----HHHHHHHH-----HHTCCCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred cccC-----HHHHHHHH-----hhcccccC------------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 7431 11111111 00000011 1123457889999999999999999999997653
No 205
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3e-37 Score=345.56 Aligned_cols=253 Identities=25% Similarity=0.300 Sum_probs=196.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCce
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~ 755 (997)
..++|++.+.||+|+||.||+|+++.+++.||||+++.... ...+|++++.++ +||||+++++++ .+.+.
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~-----~~~~~ 90 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVY-----DDGKY 90 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEE-----ECSSE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEE-----EcCCE
Confidence 45789999999999999999999999999999999975432 235688888888 799999999995 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC----CcEEE
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----MVAHV 831 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~----~~~kl 831 (997)
.|+||||+++|+|.+++.... .+++..+..++.||+.||+|||++ +|+||||||+||++.++ +.+||
T Consensus 91 ~~lv~E~~~gg~L~~~i~~~~------~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl 161 (342)
T 2qr7_A 91 VYVVTELMKGGELLDKILRQK------FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRI 161 (342)
T ss_dssp EEEEECCCCSCBHHHHHHTCT------TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEE
T ss_pred EEEEEeCCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEE
Confidence 999999999999999998754 488999999999999999999999 99999999999998543 35999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+|+..... .......+||+.|+|||++.. ..++.++||||+||++|||++|+.||.
T Consensus 162 ~Dfg~a~~~~~~--------~~~~~~~~gt~~y~aPE~~~~------------~~~~~~~DiwslG~il~ell~g~~Pf~ 221 (342)
T 2qr7_A 162 CDFGFAKQLRAE--------NGLLMTPCYTANFVAPEVLER------------QGYDAACDIWSLGVLLYTMLTGYTPFA 221 (342)
T ss_dssp CCCTTCEECBCT--------TCCBCCSSCCSSCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred EECCCcccCcCC--------CCceeccCCCccccCHHHhcC------------CCCCCccCeeeHhHHHHHHhcCCCCCC
Confidence 999999865221 112234578999999987753 457889999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ....+.......... .... . .......++.+++.+||..||++||++.|+++
T Consensus 222 ~~~~--~~~~~~~~~i~~~~~-~~~~-~------------~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 222 NGPD--DTPEEILARIGSGKF-SLSG-G------------YWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp SSTT--SCHHHHHHHHHHCCC-CCCS-T------------TTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCc--CCHHHHHHHHccCCc-ccCc-c------------ccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 4321 122222221111000 0000 0 00112456789999999999999999999875
No 206
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.9e-37 Score=337.28 Aligned_cols=262 Identities=20% Similarity=0.238 Sum_probs=197.4
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ....+.+.+|++++++++||||+++++++.. .
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~-----~ 106 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI-----D 106 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE-----T
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee-----C
Confidence 3478999999999999999999999899999999997432 3335788999999999999999999999643 5
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
+..++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 107 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~D 177 (309)
T 2h34_A 107 GQLYVDMRLINGVDLAAMLRRQG------PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVD 177 (309)
T ss_dssp TEEEEEEECCCCEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECS
T ss_pred CeEEEEEEecCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEec
Confidence 58999999999999999998754 488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||++....... ........||+.|+|||.+. +..++.++||||||+++|||++|+.||...
T Consensus 178 fg~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 178 FGIASATTDEK-------LTQLGNTVGTLYYMAPERFS------------ESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp CCC-----------------------CCGGGCCGGGTC------------C----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred CccCccccccc-------cccccccCCCcCccCHHHHc------------CCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 99997652211 11223456899999996553 567888999999999999999999998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-EMRDVLAKLCAARQT 991 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~ 991 (997)
. .... ....... ...+. .....++.++.+++.+||..||++|| +++++++.|++....
T Consensus 239 ~-----~~~~-~~~~~~~---~~~~~-----------~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~ 297 (309)
T 2h34_A 239 Q-----LSVM-GAHINQA---IPRPS-----------TVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALAT 297 (309)
T ss_dssp H-----HHHH-HHHHHSC---CCCGG-----------GTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC-
T ss_pred h-----HHHH-HHHhccC---CCCcc-----------ccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHh
Confidence 1 1111 1100000 00000 00112345678999999999999999 999999999876543
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-36 Score=339.89 Aligned_cols=267 Identities=22% Similarity=0.294 Sum_probs=200.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||+||+|++..+++.||||+++... .+.+.+|++++++++ ||||+++++++... .....+
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~ 109 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDP---VSRTPA 109 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECT---TTCCEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccC---CCCceE
Confidence 67999999999999999999999899999999987433 367889999999997 99999999997532 255789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC-cEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-VAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-~~kl~DFg~ 836 (997)
+||||+++++|.+++.. ++...++.++.|++.||+|||++ +|+||||||+||+++.++ .+||+|||+
T Consensus 110 lv~e~~~~~~l~~~~~~---------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~ 177 (330)
T 3nsz_A 110 LVFEHVNNTDFKQLYQT---------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGL 177 (330)
T ss_dssp EEEECCCCCCHHHHGGG---------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEeccCchhHHHHHHh---------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCC
Confidence 99999999999999853 67889999999999999999999 999999999999999777 899999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... .......||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 178 a~~~~~~---------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~ 237 (330)
T 3nsz_A 178 AEFYHPG---------QEYNVRVASRYFKGPELLVD-----------YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN 237 (330)
T ss_dssp CEECCTT---------CCCCSCCSCGGGCCHHHHTT-----------CCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH
T ss_pred ceEcCCC---------CccccccccccccChhhhcC-----------CCcCCchhhHHHHHHHHHHHHhCCCCcccCCch
Confidence 9765221 12233578999999976642 256889999999999999999999999643222
Q ss_pred CccHHHHHHhhcchhhhhhc-------Ccc--------cccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETV-------DPS--------LLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDV 981 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~-------d~~--------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ev 981 (997)
...+.............+.+ ++. ....+..............++.+++.+||+.||++|||++|+
T Consensus 238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~ 317 (330)
T 3nsz_A 238 YDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREA 317 (330)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 11122211111111111110 000 000010000011112245678899999999999999999999
Q ss_pred HH
Q 001908 982 LA 983 (997)
Q Consensus 982 l~ 983 (997)
++
T Consensus 318 l~ 319 (330)
T 3nsz_A 318 ME 319 (330)
T ss_dssp HT
T ss_pred hc
Confidence 86
No 208
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.2e-37 Score=362.84 Aligned_cols=249 Identities=25% Similarity=0.351 Sum_probs=191.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|+.+.+++.||||+++.. .......+.+|+++++.++||||+++++++.. .+
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~-----~~ 221 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-----HD 221 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE-----TT
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee-----CC
Confidence 46799999999999999999999999999999999742 33345677889999999999999999999643 45
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
..++||||+++|+|.+++.... .+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 222 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~D 292 (446)
T 4ejn_A 222 RLCFVMEYANGGELFFHLSRER------VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITD 292 (446)
T ss_dssp EEEEEECCCSSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECC
T ss_pred EEEEEEeeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEcc
Confidence 8999999999999999998754 48899999999999999999998 7 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+.... ........+||+.|+|||++. +..++.++|||||||++|||++|+.||...
T Consensus 293 FG~a~~~~~--------~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 352 (446)
T 4ejn_A 293 FGLCKEGIK--------DGATMKTFCGTPEYLAPEVLE------------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 352 (446)
T ss_dssp CCCCCTTCC-------------CCSSSCGGGCCHHHHH------------TSCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred CCCceeccC--------CCcccccccCCccccCHhhcC------------CCCCCCccchhhhHHHHHHHhhCCCCCCCC
Confidence 999975321 112233467999999997664 567899999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~ 983 (997)
...+......... ... +...++++.+++.+||..||++|| +++|+++
T Consensus 353 -----~~~~~~~~i~~~~------~~~------------p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 353 -----DHEKLFELILMEE------IRF------------PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp -----SHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred -----CHHHHHHHHHhCC------CCC------------CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 1222211111000 000 011245678999999999999999 9999875
No 209
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.1e-37 Score=347.07 Aligned_cols=275 Identities=21% Similarity=0.303 Sum_probs=194.4
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch-----hhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-----GALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
....++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++||||+++++++
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---- 81 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF---- 81 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE----
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE----
Confidence 3445789999999999999999999998999999999964321 1234678999999999999999999995
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
...+..++||||+++ +|.+++..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+
T Consensus 82 -~~~~~~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~ 151 (346)
T 1ua2_A 82 -GHKSNISLVFDFMET-DLEVIIKDNSL-----VLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVL 151 (346)
T ss_dssp -CCTTCCEEEEECCSE-EHHHHHTTCCS-----SCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCE
T ss_pred -eeCCceEEEEEcCCC-CHHHHHHhcCc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCE
Confidence 445689999999975 89999876542 367788999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+..... ........||+.|+|||++.. ...++.++|||||||++|||++|.+|
T Consensus 152 kl~Dfg~a~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~~ 212 (346)
T 1ua2_A 152 KLADFGLAKSFGSP--------NRAYTHQVVTRWYRAPELLFG-----------ARMYGVGVDMWAVGCILAELLLRVPF 212 (346)
T ss_dssp EECCCGGGSTTTSC--------CCCCCCSCCCCTTCCHHHHTT-----------CSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred EEEecccceeccCC--------cccCCcccccccccCchHhhC-----------CCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 99999999865221 112234578999999987642 23478899999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhh-cc--hhhhhhcC-cccc--cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMA-LP--EKVMETVD-PSLL--LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~-~~--~~~~~~~d-~~~~--~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|...... ..+....... .+ ..+..... +... ..............+..++.+++.+||..||++|||+.|+++
T Consensus 213 ~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 213 LPGDSDL-DQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SCCSSHH-HHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCCCCHH-HHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 8643211 1111111110 00 00000000 0000 000000000011233467889999999999999999999976
No 210
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-36 Score=358.56 Aligned_cols=251 Identities=22% Similarity=0.292 Sum_probs=195.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+.|++.++||+|+||+||+|+++.++..||+|++.... ......+.+|+++++.++||||+++++++. ....
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-----~~~~ 110 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFE-----DKRN 110 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEE-----eCCE
Confidence 467999999999999999999999999999999997432 334577899999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC---CcEEEc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAHVS 832 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~---~~~kl~ 832 (997)
.++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.. +.+||+
T Consensus 111 ~~lv~e~~~~g~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~ 181 (494)
T 3lij_A 111 YYLVMECYKGGELFDEIIHRM------KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIV 181 (494)
T ss_dssp EEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEEC
T ss_pred EEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEE
Confidence 999999999999999988754 488999999999999999999999 99999999999999764 559999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+.... ........||+.|+|||++. +.++.++||||+||++|+|++|+.||..
T Consensus 182 DfG~a~~~~~---------~~~~~~~~gt~~y~aPE~l~-------------~~~~~~~DiwslG~il~~ll~g~~pf~~ 239 (494)
T 3lij_A 182 DFGLSAVFEN---------QKKMKERLGTAYYIAPEVLR-------------KKYDEKCDVWSIGVILFILLAGYPPFGG 239 (494)
T ss_dssp CCTTCEECBT---------TBCBCCCCSCTTTCCHHHHT-------------TCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ECCCCeECCC---------CccccccCCCcCeeCHHHHc-------------ccCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 9999976522 11223457999999998763 3588999999999999999999999974
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+......... .....+. ....+..+.+++.+||..||++|||+.|+++
T Consensus 240 ~~-----~~~~~~~i~~~~-~~~~~~~-------------~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 240 QT-----DQEILRKVEKGK-YTFDSPE-------------WKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp SS-----HHHHHHHHHHTC-CCCCSGG-------------GTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CC-----HHHHHHHHHhCC-CCCCchh-------------cccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 32 122211110000 0000011 0122456789999999999999999999975
No 211
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.3e-36 Score=342.78 Aligned_cols=281 Identities=22% Similarity=0.327 Sum_probs=201.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc---CC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---KG 752 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---~~ 752 (997)
.++|++.++||+|+||+||+|+++.+++.||||++.... ......+.+|++++++++||||+++++++..... ..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 368999999999999999999999899999999986332 2334677899999999999999999999865321 11
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..++||||+++ ++.+.+..... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~ 166 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLA 166 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHCTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred CceEEEEEeccCC-CHHHHHhhccC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEc
Confidence 4578999999964 88888876532 488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+........ .........||+.|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 167 Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~pf~~ 231 (351)
T 3mi9_A 167 DFGLARAFSLAKNS----QPNRYTNRVVTLWYRPPELLLG-----------ERDYGPPIDLWGAGCIMAEMWTRSPIMQG 231 (351)
T ss_dssp CCTTCEECCCCSSS----SCCCCCSSCSCGGGCCHHHHTT-----------CCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cchhcccccccccc----cccccCCcccccCccCchhhcC-----------CCCCCcHhHHHHHHHHHHHHHhCCCCCCC
Confidence 99999875322111 1122334578999999987642 24578999999999999999999999874
Q ss_pred CcCCCccHHHHHHhh--cchhhhhhcC-ccccccc--ccchhhhh-----HHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 913 MFQGGLTLHEFCKMA--LPEKVMETVD-PSLLLAW--SDGRRRAK-----VEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~--~~~~~~~~~d-~~~~~~~--~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
..... ......... .+.......+ ....... ........ .....+.+.+++.+||..||++|||++|++
T Consensus 232 ~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l 310 (351)
T 3mi9_A 232 NTEQH-QLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDAL 310 (351)
T ss_dssp SSHHH-HHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred CChHH-HHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHh
Confidence 32110 111111110 0111100000 0000000 00000000 111235688999999999999999999997
Q ss_pred H
Q 001908 983 A 983 (997)
Q Consensus 983 ~ 983 (997)
+
T Consensus 311 ~ 311 (351)
T 3mi9_A 311 N 311 (351)
T ss_dssp T
T ss_pred C
Confidence 6
No 212
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=6.4e-37 Score=333.43 Aligned_cols=250 Identities=24% Similarity=0.383 Sum_probs=182.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|+...+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 84 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFE-----DSN 84 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEE-----CSS
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEc-----cCC
Confidence 467999999999999999999998899999999996432 223467899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 85 ~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~df 156 (278)
T 3cok_A 85 YVYLVLEMCHNGEMNRYLKNRV-----KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADF 156 (278)
T ss_dssp EEEEEEECCTTEEHHHHHHTCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCcHHHHHhhcc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEee
Confidence 8999999999999999998653 2488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.+...... ........||+.|+|||.+. +..++.++||||+||++|||++|+.||....
T Consensus 157 g~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 216 (278)
T 3cok_A 157 GLATQLKMP--------HEKHYTLCGTPNYISPEIAT------------RSAHGLESDVWSLGCMFYTLLIGRPPFDTDT 216 (278)
T ss_dssp TTCEECC------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred cceeeccCC--------CCcceeccCCCCcCCcchhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence 999765211 11223356899999996654 4567889999999999999999999997432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
... ..... .... +. .+...+.++.+++.+||+.||++|||+.|+++
T Consensus 217 ~~~-----~~~~~--------~~~~----~~------~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 217 VKN-----TLNKV--------VLAD----YE------MPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp CC----------C--------CSSC----CC------CCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHH-----HHHHH--------hhcc----cC------CccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 211 00000 0000 00 00112456789999999999999999999975
No 213
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=8e-37 Score=360.03 Aligned_cols=252 Identities=25% Similarity=0.326 Sum_probs=201.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.+.||+|+||+||+|+.+.+++.||||++... .....+.+.+|++++++++||||+++++++ ...
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-----~~~ 98 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF-----EDK 98 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE-----ECS
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE-----EeC
Confidence 346899999999999999999999999999999998632 233467889999999999999999999995 445
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAH 830 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~k 830 (997)
...++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.+|
T Consensus 99 ~~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 169 (484)
T 3nyv_A 99 GYFYLVGEVYTGGELFDEIISRK------RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIR 169 (484)
T ss_dssp SEEEEEECCCCSCBHHHHHHTCS------CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEE
T ss_pred CEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEE
Confidence 68999999999999999998754 488999999999999999999999 99999999999999 5678999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+.... ........||+.|+|||++. +.++.++||||+||++|+|++|++||
T Consensus 170 l~Dfg~a~~~~~---------~~~~~~~~gt~~y~aPE~~~-------------~~~~~~~DiwslG~il~~ll~g~~pf 227 (484)
T 3nyv_A 170 IIDFGLSTHFEA---------SKKMKDKIGTAYYIAPEVLH-------------GTYDEKCDVWSTGVILYILLSGCPPF 227 (484)
T ss_dssp ECCTTHHHHBCC---------CCSHHHHTTGGGTCCHHHHH-------------TCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EEeeeeeEEccc---------ccccccCCCCccccCceeec-------------CCCCCcceeHHHHHHHHHHHHCCCCC
Confidence 999999987622 11233457999999998764 35888999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+.......... .... +.....++.+.+++.+||..||++|||+.|+++
T Consensus 228 ~~~~-----~~~~~~~i~~~~~-~~~~-------------~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 228 NGAN-----EYDILKKVEKGKY-TFEL-------------PQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CCSS-----HHHHHHHHHHCCC-CCCS-------------GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCC-----HHHHHHHHHcCCC-CCCC-------------cccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 7431 1111111100000 0000 011123456789999999999999999999975
No 214
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=4.8e-37 Score=336.15 Aligned_cols=249 Identities=16% Similarity=0.243 Sum_probs=195.7
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~ 753 (997)
..++|++.+.||+|+||+||+|++..+++.||+|+++.. .......+.+|+..+.++ +||||+++++++.. .
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~-----~ 83 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE-----D 83 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE-----T
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec-----C
Confidence 457899999999999999999999989999999999743 334457788999999999 99999999999643 5
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-------
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD------- 826 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~------- 826 (997)
+..++||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 84 ~~~~lv~e~~~~~~L~~~l~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~ 158 (289)
T 1x8b_A 84 DHMLIQNEYCNGGSLADAISENYRI--MSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAAS 158 (289)
T ss_dssp TEEEEEEECCTTCBHHHHHHHHHHH--TCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------
T ss_pred CeEEEEEEecCCCcHHHHHHhhccc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccc
Confidence 5899999999999999999874210 12478999999999999999999999 99999999999999844
Q ss_pred ------------CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhH
Q 001908 827 ------------MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVY 894 (997)
Q Consensus 827 ------------~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~Dvw 894 (997)
..+||+|||.+..... .....||+.|+|||++.. ...++.++|||
T Consensus 159 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------~~~~~gt~~y~aPE~~~~-----------~~~~~~~~Di~ 215 (289)
T 1x8b_A 159 EEGDEDDWASNKVMFKIGDLGHVTRISS------------PQVEEGDSRFLANEVLQE-----------NYTHLPKADIF 215 (289)
T ss_dssp -----------CCCEEECCCTTCEETTC------------SCCCCCCGGGCCHHHHTT-----------CCTTHHHHHHH
T ss_pred cccccccccCCceEEEEcccccccccCC------------ccccCCCccccChhHhcC-----------CCCCCchhhHH
Confidence 4899999999976521 112358999999987652 23566899999
Q ss_pred HHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCC
Q 001908 895 SLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIE 974 (997)
Q Consensus 895 SlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~ 974 (997)
||||++|||++|.+|+... ........ ...+.. +..++.++.+++.+||+.||++
T Consensus 216 slG~il~~l~~~~~~~~~~----~~~~~~~~---------~~~~~~------------~~~~~~~~~~li~~~l~~dp~~ 270 (289)
T 1x8b_A 216 ALALTVVCAAGAEPLPRNG----DQWHEIRQ---------GRLPRI------------PQVLSQEFTELLKVMIHPDPER 270 (289)
T ss_dssp HHHHHHHHHTTCCCCCSSS----HHHHHHHT---------TCCCCC------------SSCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHHHHhcCCCCCcch----hHHHHHHc---------CCCCCC------------CcccCHHHHHHHHHHhCCCccc
Confidence 9999999999998876421 11111110 000111 0112456789999999999999
Q ss_pred CCCHHHHHH
Q 001908 975 RMEMRDVLA 983 (997)
Q Consensus 975 Rps~~evl~ 983 (997)
|||+.|+++
T Consensus 271 Rps~~~ll~ 279 (289)
T 1x8b_A 271 RPSAMALVK 279 (289)
T ss_dssp SCCHHHHHT
T ss_pred CCCHHHHhh
Confidence 999999975
No 215
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=1e-36 Score=339.33 Aligned_cols=257 Identities=23% Similarity=0.279 Sum_probs=197.8
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCCcceEEeeeec
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTRHRNLIKIITVCSS 747 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~ 747 (997)
...++|.+.+.||+|+||.||+|++..+++.||||++.... ......+.+|++++++++||||+++++++..
T Consensus 7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 86 (322)
T 2ycf_A 7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA 86 (322)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEES
T ss_pred hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcC
Confidence 34578999999999999999999999999999999986422 1223457899999999999999999998642
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM 827 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~ 827 (997)
. ..++||||+++++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++
T Consensus 87 -----~-~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~ 151 (322)
T 2ycf_A 87 -----E-DYYIVLELMEGGELFDKVVGNK------RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQE 151 (322)
T ss_dssp -----S-SEEEEEECCTTEETHHHHSTTC------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSS
T ss_pred -----C-ceEEEEecCCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCC
Confidence 2 3799999999999999997654 488999999999999999999999 999999999999998766
Q ss_pred c---EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 828 V---AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 828 ~---~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
. +||+|||+++.... ........||+.|+|||++.. .....++.++|||||||++|||+
T Consensus 152 ~~~~~kl~Dfg~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~~~~Di~slG~il~~l~ 213 (322)
T 2ycf_A 152 EDCLIKITDFGHSKILGE---------TSLMRTLCGTPTYLAPEVLVS---------VGTAGYNRAVDCWSLGVILFICL 213 (322)
T ss_dssp SSCCEEECCCTTCEECCC---------CHHHHHHHSCCTTCCHHHHHH---------TTTTTCTTHHHHHHHHHHHHHHH
T ss_pred CCCeEEEccCccceeccc---------ccccccccCCcCccCchhhcc---------CCCCCCCchhhHHHHHHHHHHHH
Confidence 4 99999999976521 112234568999999987642 12356889999999999999999
Q ss_pred hCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 TRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+|+.||....... .+.......... ..+ .....++..+.+++.+||..||++||++.|+++
T Consensus 214 ~g~~pf~~~~~~~-~~~~~~~~~~~~-----~~~------------~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 214 SGYPPFSEHRTQV-SLKDQITSGKYN-----FIP------------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HSSCSSCSTTCSS-CHHHHHHHTCCC-----CCH------------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hCCCCCcccchHH-HHHHHHHhCccc-----cCc------------hhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 9999997543222 122211111000 000 011123457789999999999999999999974
No 216
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.6e-37 Score=345.00 Aligned_cols=263 Identities=27% Similarity=0.407 Sum_probs=203.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEE--EEEEeccc-chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFV--AVKILNLM-QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~v--AvK~~~~~-~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
++|++.+.||+|+||.||+|+++.++..+ |+|+++.. .....+.+.+|+++++++ +||||+++++++. ..+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-----~~~ 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACE-----HRG 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEE-----ETT
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeee-----eCC
Confidence 57999999999999999999998888765 99988642 333456789999999999 8999999999964 355
Q ss_pred eEEEEEeeccCCCHHHHhhcCCC----------CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNG----------QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD 824 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~----------~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~ 824 (997)
..++||||+++|+|.+++..... ......+++..++.++.|++.||+|||++ +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 89999999999999999987531 01122588999999999999999999999 999999999999999
Q ss_pred CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 825 HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 825 ~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
.++.+||+|||+++... .........+++.|+|||++. +..++.++|||||||++|||+
T Consensus 177 ~~~~~kL~Dfg~~~~~~---------~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~ell 235 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQE---------VYVKKTMGRLPVRWMAIESLN------------YSVYTTNSDVWSYGVLLWEIV 235 (327)
T ss_dssp GGGCEEECCTTCEESSC---------EECCC----CCTTTCCHHHHH------------HCEECHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEcccCcCcccc---------ccccccCCCCCccccChhhhc------------cccCCchhcchHHHHHHHHHH
Confidence 99999999999997431 111223345788999998764 356788999999999999999
Q ss_pred h-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 T-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
| |+.||... ...+...... ...... .+..++.++.+++.+||..||++|||+.|+++
T Consensus 236 t~g~~pf~~~-----~~~~~~~~~~-----~~~~~~------------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 293 (327)
T 1fvr_A 236 SLGGTPYCGM-----TCAELYEKLP-----QGYRLE------------KPLNCDDEVYDLMRQCWREKPYERPSFAQILV 293 (327)
T ss_dssp TTSCCTTTTC-----CHHHHHHHGG-----GTCCCC------------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cCCCCCCCCC-----cHHHHHHHhh-----cCCCCC------------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 8 99998743 1222211111 000000 01123456889999999999999999999999
Q ss_pred HHHHHHHHh
Q 001908 984 KLCAARQTL 992 (997)
Q Consensus 984 ~L~~~~~~~ 992 (997)
.|.++.++.
T Consensus 294 ~L~~~~~~~ 302 (327)
T 1fvr_A 294 SLNRMLEER 302 (327)
T ss_dssp HHHHHHHSS
T ss_pred HHHHHHHhh
Confidence 999988754
No 217
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=5.2e-37 Score=336.31 Aligned_cols=259 Identities=20% Similarity=0.272 Sum_probs=186.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|++..+++.||+|+++... ....+.+.++...++.++||||+++++++. ..+.
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~-----~~~~ 80 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REGD 80 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE-----CSSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeee-----ccCC
Confidence 468999999999999999999999899999999997432 223334455555678889999999999964 4557
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||++ |+|.+++...... ...+++..++.++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||
T Consensus 81 ~~lv~e~~~-~~l~~~l~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 81 VWICMELMD-TSLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred EEEEEehhc-cchHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 999999996 5888887652111 124899999999999999999999853 89999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
.|+..... .......||+.|+|||.+.. ...+..++.++||||+||++|||++|+.||.....
T Consensus 156 ~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~--------~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 218 (290)
T 3fme_A 156 ISGYLVDD---------VAKDIDAGCKPYMAPERINP--------ELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 218 (290)
T ss_dssp -----------------------CCCCCCSCHHHHSC--------CTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSC
T ss_pred Cccccccc---------ccccccCCCccccChhhcCh--------hhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCc
Confidence 99765221 12223468999999988642 12346688999999999999999999999974321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... ....+... ...++.++.+++.+||+.||++|||+.|+++
T Consensus 219 ---~~~~~~~~~------~~~~~~~~-----------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 219 ---PFQQLKQVV------EEPSPQLP-----------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp ---HHHHHHHHH------HSCCCCCC-----------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---hHHHHHHHh------ccCCCCcc-----------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111111110 00011100 0122456789999999999999999999987
No 218
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=3.4e-36 Score=328.64 Aligned_cols=259 Identities=21% Similarity=0.282 Sum_probs=201.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||.||+|+...+++.||+|+++.... ...+.+.+|++++++++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----- 78 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFE----- 78 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEE-----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheec-----
Confidence 4679999999999999999999998999999999864321 13578899999999999999999999954
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC----
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM---- 827 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~---- 827 (997)
.....++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++
T Consensus 79 ~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~ 149 (283)
T 3bhy_A 79 NKTDVVLILELVSGGELFDFLAEKE------SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNP 149 (283)
T ss_dssp CSSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSC
T ss_pred CCCeEEEEEeecCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCC
Confidence 4568999999999999999998654 488999999999999999999999 999999999999999887
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||.++..... .......||+.|+|||.+. +..++.++||||||+++|||++|+
T Consensus 150 ~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~ 208 (283)
T 3bhy_A 150 RIKLIDFGIAHKIEAG---------NEFKNIFGTPEFVAPEIVN------------YEPLGLEADMWSIGVITYILLSGA 208 (283)
T ss_dssp CEEECCCTTCEECC-----------------CCCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred ceEEEecccceeccCC---------CcccccCCCcCccCcceec------------CCCCCcchhhhhHHHHHHHHHHCC
Confidence 8999999999765221 1123356899999997654 467889999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH--HH
Q 001908 908 RPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA--KL 985 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~--~L 985 (997)
.||.... ..+....... ..... ........+..+.+++.+||..||++|||+.|+++ .+
T Consensus 209 ~p~~~~~-----~~~~~~~~~~------~~~~~--------~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~ 269 (283)
T 3bhy_A 209 SPFLGET-----KQETLTNISA------VNYDF--------DEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269 (283)
T ss_dssp CTTCCSS-----HHHHHHHHHT------TCCCC--------CHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHH
T ss_pred CCCCCcc-----hHHHHHHhHh------cccCC--------cchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHH
Confidence 9987431 1111111000 00000 00111223456789999999999999999999987 45
Q ss_pred HHHHH
Q 001908 986 CAARQ 990 (997)
Q Consensus 986 ~~~~~ 990 (997)
++++.
T Consensus 270 ~~~~~ 274 (283)
T 3bhy_A 270 KAIRR 274 (283)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55544
No 219
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.5e-36 Score=333.38 Aligned_cols=252 Identities=21% Similarity=0.271 Sum_probs=198.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|.+.+.||+|+||+||+|+...+++.||+|+++.......+.+.+|++++++++||||+++++++. ..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~~ 81 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE-----STTHY 81 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEE-----CSSEE
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcc-----cCCEE
Confidence 3468999999999999999999999899999999998655445567889999999999999999999954 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~D 833 (997)
++||||+++++|.+++.... .+++..++.++.|++.|++|||+. +|+||||||+||++ +.++.+||+|
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~D 152 (304)
T 2jam_A 82 YLVMQLVSGGELFDRILERG------VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITD 152 (304)
T ss_dssp EEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCS
T ss_pred EEEEEcCCCccHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEcc
Confidence 99999999999999997654 478899999999999999999999 99999999999999 7889999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.++.... .......||+.|+|||++ .+..++.++||||+||++|||++|+.||...
T Consensus 153 fg~~~~~~~----------~~~~~~~~~~~y~aPE~~------------~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 210 (304)
T 2jam_A 153 FGLSKMEQN----------GIMSTACGTPGYVAPEVL------------AQKPYSKAVDCWSIGVITYILLCGYPPFYEE 210 (304)
T ss_dssp CSTTCCCCC----------BTTHHHHSCCCBCCTTTB------------SSCSCCHHHHHHHHHHHHHHHHHSSCTTTTS
T ss_pred CCcceecCC----------CccccccCCCCccChHHh------------ccCCCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 999864311 122335689999999655 3567899999999999999999999998743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+........ ...... +.....+..+.+++.+||..||++|||+.|+++
T Consensus 211 ~-----~~~~~~~i~~~-~~~~~~-------------~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 211 T-----ESKLFEKIKEG-YYEFES-------------PFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp C-----HHHHHHHHHHC-CCCCCT-------------TTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred C-----HHHHHHHHHcC-CCCCCc-------------cccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 11111111000 000000 001123456789999999999999999999976
No 220
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-37 Score=343.93 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=193.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCC--CCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRH--RNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~ 753 (997)
.+.|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++| +||+++++++. ..
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-----~~ 81 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TD 81 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CS
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe-----eC
Confidence 467999999999999999999986 7899999998643 34455788999999999976 99999999954 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++|||+ .+++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||+++ ++.+||+|
T Consensus 82 ~~~~lv~e~-~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~D 150 (343)
T 3dbq_A 82 QYIYMVMEC-GNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLID 150 (343)
T ss_dssp SEEEEEECC-CSEEHHHHHHHSC------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECC
T ss_pred CEEEEEEeC-CCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEee
Confidence 689999995 5889999998764 478999999999999999999999 999999999999996 68899999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|+...... .........||+.|+|||++........ +......++.++|||||||++|||++|+.||...
T Consensus 151 FG~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 223 (343)
T 3dbq_A 151 FGIANQMQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQI 223 (343)
T ss_dssp CSSSCCC------------------CCCCSSCCHHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred cccccccCccc------ccccCCCCcCCcCcCCHHHHhhcccccc-ccccccCCCchhhHHHHHHHHHHHHhCCCcchhh
Confidence 99998652211 1112234579999999998864211000 0112356889999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
... ..... ..+++.....+.. ....++.+++..||..||++|||+.|+++.
T Consensus 224 ~~~---~~~~~---------~~~~~~~~~~~~~--------~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 224 INQ---ISKLH---------AIIDPNHEIEFPD--------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp CSH---HHHHH---------HHHCTTSCCCCCC--------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhH---HHHHH---------HHhcCCcccCCcc--------cCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 211 11111 1111111111110 113467799999999999999999999764
No 221
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.4e-36 Score=357.00 Aligned_cols=251 Identities=24% Similarity=0.348 Sum_probs=198.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|...+.||+|+||+||+|+.+.+|+.||+|++.... ....+.+.+|++++++++||||+++++++ .....
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~-----~~~~~ 259 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF-----ETKTD 259 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE-----ECSSE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE-----eeCCE
Confidence 67889999999999999999999999999999996432 23456788999999999999999999984 45668
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++|+|.+++...... ...+++..++.++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~--~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDED--NPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTT--SCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEEeccCCCHHHHHHHhhcc--cccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 99999999999999999865421 22488999999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+|+...... ......+||+.|+|||++. +..++.++||||+||++|||++|+.||.....
T Consensus 335 la~~~~~~~--------~~~~~~~GT~~Y~APE~l~------------~~~~~~~~DiwSlGvilyelltG~~PF~~~~~ 394 (543)
T 3c4z_A 335 LAVELKAGQ--------TKTKGYAGTPGFMAPELLL------------GEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394 (543)
T ss_dssp TCEECCTTC--------CCBCCCCSCTTTSCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTC
T ss_pred eeeeccCCC--------cccccccCCccccChhhhc------------CCCCChHHhcCcchHHHHHHHhCCCCCCCCcc
Confidence 998652211 1123357999999997664 56789999999999999999999999975422
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
. ....+......... ... +...+..+.+++.+||..||++||++
T Consensus 395 ~-~~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 395 K-VENKELKQRVLEQA------VTY------------PDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp C-CCHHHHHHHHHHCC------CCC------------CTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred c-hhHHHHHHHHhhcc------cCC------------CcccCHHHHHHHHHhccCCHhHCCCC
Confidence 1 12222221111000 000 01224567899999999999999975
No 222
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.3e-36 Score=341.26 Aligned_cols=283 Identities=23% Similarity=0.305 Sum_probs=204.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
.++|++.+.||+|+||+||+|++..+++.||||++... .......+.+|++++++++||||+++++++....+......
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 46899999999999999999999989999999999743 33445678899999999999999999999766555556789
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ |+|.+++.... +++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+
T Consensus 90 ~lv~e~~~-~~L~~~~~~~~-------~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 158 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQM-------LSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGL 158 (353)
T ss_dssp EEEECCCS-EEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTT
T ss_pred EEEEeccC-ccHHHHHhhcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccc
Confidence 99999996 69999998743 88999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCcc--ccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 837 ARFLFARPFDTSM--ETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 837 a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+........... ..........||+.|+|||++.. +..++.++|||||||++|||++|+.||....
T Consensus 159 a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 227 (353)
T 2b9h_A 159 ARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT-----------SAKYSRAMDVWSCGCILAELFLRRPIFPGRD 227 (353)
T ss_dssp CEECC----------------CCCCCCGGGCCHHHHHS-----------CCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ccccccccccccCccccccchhhccccccccCCeeecc-----------CCCccchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 9876332111110 01112234578999999987642 3568899999999999999999999997432
Q ss_pred CCCccHHHHHHhh-cc--hhhhhhc-Ccccc------cccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA-LP--EKVMETV-DPSLL------LAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~-~~--~~~~~~~-d~~~~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
... .+....... .+ ....... .+... ..+...........++.++.+++.+||..||++|||+.|+++
T Consensus 228 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 228 YRH-QLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp HHH-HHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cHH-HHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 110 001110000 00 0000000 00000 000000001111234567889999999999999999999976
No 223
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.9e-36 Score=345.16 Aligned_cols=335 Identities=20% Similarity=0.228 Sum_probs=265.4
Q ss_pred CCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCe
Q 001908 216 NMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWS 295 (997)
Q Consensus 216 ~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 295 (997)
.+++++.|++++|.++ .+|..++..+++|++|++++|.+++..|..|..+++|++|+|++|++++.++..|+++++|++
T Consensus 43 ~l~~l~~l~l~~~~l~-~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp GGCCCSEEEEESCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCCceEEEecCCchh-hCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 4678888899888887 788888778889999999999988877788889999999999999998888888888888888
Q ss_pred eEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEE
Q 001908 296 LDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLL 375 (997)
Q Consensus 296 L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 375 (997)
|+|++|+++.++.. .+.++++|++|++++|+++ +..|..|.++++|++|
T Consensus 122 L~L~~n~l~~l~~~------~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L 170 (390)
T 3o6n_A 122 LVLERNDLSSLPRG------IFHNTPKLTTLSMSNNNLE-------------------------RIEDDTFQATTSLQNL 170 (390)
T ss_dssp EECCSSCCCCCCTT------TTTTCTTCCEEECCSSCCC-------------------------BCCTTTTSSCTTCCEE
T ss_pred EECCCCccCcCCHH------HhcCCCCCcEEECCCCccC-------------------------ccChhhccCCCCCCEE
Confidence 88888888765442 2345666666666665554 3455567777888888
Q ss_pred eccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCccc
Q 001908 376 GIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 376 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 455 (997)
++++|++++. .+..+++|+.|++++|.+++ +...++|+.|++++|+++.. |..+ .++|+.|++++|+++
T Consensus 171 ~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~ 239 (390)
T 3o6n_A 171 QLSSNRLTHV---DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLT 239 (390)
T ss_dssp ECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCC
T ss_pred ECCCCcCCcc---ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-cccc--cccccEEECCCCCCc
Confidence 8888888754 35667888888888888874 23446788888888888854 4332 478899999999887
Q ss_pred CCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhc
Q 001908 456 GAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSL 535 (997)
Q Consensus 456 ~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (997)
+. ..+..++++ +.|++++|.+++..|..|..+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+
T Consensus 240 ~~--~~l~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~ 314 (390)
T 3o6n_A 240 DT--AWLLNYPGL-VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQ 314 (390)
T ss_dssp CC--GGGGGCTTC-SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGH
T ss_pred cc--HHHcCCCCc-cEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccc
Confidence 53 567778887 88999999998888889999999999999999998 46777788999999999999998 677788
Q ss_pred cccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 536 RSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
..+++|+.|+|++|++++. | +..+++|+.|++++|++++.... ..+..+....+.+++..|.+
T Consensus 315 ~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 315 PQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp HHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCT
T ss_pred cccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceecc
Confidence 8999999999999999854 3 77889999999999999875432 34555666677888888864
No 224
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=2.8e-36 Score=356.80 Aligned_cols=252 Identities=22% Similarity=0.275 Sum_probs=198.3
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch-------------hhHHHHHHHHHHHhhcCCCCcceEEe
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-------------GALKSFVAECEVLRNTRHRNLIKIIT 743 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~l~~ 743 (997)
..++|++.++||+|+||+||+|+.+.+++.||+|++..... ...+.+.+|++++++++||||+++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 35789999999999999999999999999999999864321 23467899999999999999999999
Q ss_pred eeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee
Q 001908 744 VCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL 823 (997)
Q Consensus 744 ~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll 823 (997)
++. .....++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 114 ~~~-----~~~~~~lv~e~~~gg~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~ 179 (504)
T 3q5i_A 114 VFE-----DKKYFYLVTEFYEGGELFEQIINRH------KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILL 179 (504)
T ss_dssp EEE-----CSSEEEEEEECCTTCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEE
T ss_pred EEE-----cCCEEEEEEecCCCCcHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEE
Confidence 954 4668999999999999999998754 488999999999999999999999 99999999999999
Q ss_pred CCCC---cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHH
Q 001908 824 DHDM---VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900 (997)
Q Consensus 824 ~~~~---~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl 900 (997)
+.++ .+||+|||+|+..... .......||+.|+|||++. +.++.++||||+||++
T Consensus 180 ~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~-------------~~~~~~~DiwslG~il 237 (504)
T 3q5i_A 180 ENKNSLLNIKIVDFGLSSFFSKD---------YKLRDRLGTAYYIAPEVLK-------------KKYNEKCDVWSCGVIM 237 (504)
T ss_dssp SSTTCCSSEEECCCTTCEECCTT---------SCBCCCCSCTTTCCHHHHT-------------TCBCTHHHHHHHHHHH
T ss_pred ecCCCCccEEEEECCCCEEcCCC---------CccccccCCcCCCCHHHhc-------------cCCCchHHHHHHHHHH
Confidence 9876 6999999999865221 1223457999999998764 3588999999999999
Q ss_pred HHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH
Q 001908 901 LEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRD 980 (997)
Q Consensus 901 ~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e 980 (997)
|+|++|+.||.... ..+......... ... ..+.....+.++.+++.+||..||++|||+.|
T Consensus 238 ~~ll~g~~pf~~~~-----~~~~~~~i~~~~----~~~----------~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e 298 (504)
T 3q5i_A 238 YILLCGYPPFGGQN-----DQDIIKKVEKGK----YYF----------DFNDWKNISDEAKELIKLMLTYDYNKRCTAEE 298 (504)
T ss_dssp HHHHHSSCSSCCSS-----HHHHHHHHHHCC----CCC----------CHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred HHHHhCCCCCCCCC-----HHHHHHHHHcCC----CCC----------CccccCCCCHHHHHHHHHHcCCChhHCCCHHH
Confidence 99999999997431 122211110000 000 00111123456789999999999999999999
Q ss_pred HHH
Q 001908 981 VLA 983 (997)
Q Consensus 981 vl~ 983 (997)
+++
T Consensus 299 ~l~ 301 (504)
T 3q5i_A 299 ALN 301 (504)
T ss_dssp HHT
T ss_pred Hhc
Confidence 975
No 225
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-36 Score=344.10 Aligned_cols=199 Identities=26% Similarity=0.417 Sum_probs=172.3
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
++|++.+.||+|+||+||+|++..+++.||+|+++.. .....+.+.+|++++++++||||+++++++.. .+..+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-----~~~~~ 107 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-----DGEIS 107 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE-----TTEEE
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE-----CCEEE
Confidence 5799999999999999999999999999999999754 34456788999999999999999999999643 55899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++.... .+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||++
T Consensus 108 lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~ 179 (360)
T 3eqc_A 108 ICMEHMDGGSLDQVLKKAG------RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVS 179 (360)
T ss_dssp EEECCCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCC
T ss_pred EEEECCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCC
Confidence 9999999999999998764 4788999999999999999999842 7999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
+.... .......||+.|+|||++. +..++.++|||||||++|||++|+.||..
T Consensus 180 ~~~~~----------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~ 232 (360)
T 3eqc_A 180 GQLID----------SMANSFVGTRSYMSPERLQ------------GTHYSVQSDIWSMGLSLVEMAVGRYPIPP 232 (360)
T ss_dssp HHHHH----------HC----CCCCTTCCHHHHT------------TCCCSHHHHHHHHHHHHHHHHHTSCCSSC
T ss_pred ccccc----------ccccCCCCCCCeECHHHHc------------CCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 76522 1223357899999997654 56789999999999999999999999974
No 226
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.7e-37 Score=342.74 Aligned_cols=259 Identities=20% Similarity=0.306 Sum_probs=196.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHH-HhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEV-LRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~-l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|++.+.||+|+||+||+|++..+++.||||+++.. .......+..|+.+ ++.++||||+++++++. ..+.
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~-----~~~~ 124 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALF-----REGD 124 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEE-----CSSC
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEE-----eCCc
Confidence 45788899999999999999999889999999999743 23334555666665 77789999999999964 3457
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++ +|.+++...... ...+++..++.++.||+.||+|||++. +|+||||||+||+++.++.+||+|||
T Consensus 125 ~~lv~e~~~~-~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 125 VWICMELMDT-SLDKFYKQVIDK--GQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT--SCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred EEEEHHHhhC-cHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 9999999975 999988752110 124889999999999999999999742 89999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++.... ........||+.|+|||++... ..+..++.++|||||||++|||+||+.||.....
T Consensus 200 ~~~~~~~---------~~~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~ 262 (340)
T 3an0_A 200 ISGYLVD---------SVAKTIDAGCKPYMAPERINPE--------LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT 262 (340)
T ss_dssp HHHHHSC---------HHHHHHSSCCCCCCCHHHHSCC--------TTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC
T ss_pred Cceeccc---------ccccccCCCCccccCccccccc--------cccCCCCchhhHHHHHHHHHHHHHCCCCCccccc
Confidence 9987521 1122335799999999887421 2245688999999999999999999999974321
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......... ....+... ...++.++.+++.+||..||++|||+.|+++
T Consensus 263 ---~~~~~~~~~------~~~~~~~~-----------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 263 ---PFQQLKQVV------EEPSPQLP-----------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ---HHHHHHHHH------HSCCCCCC-----------GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ---hHHHHHHHh------cCCCCCCC-----------cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 111111110 00111110 0123456889999999999999999999976
No 227
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.3e-37 Score=345.49 Aligned_cols=274 Identities=16% Similarity=0.136 Sum_probs=204.5
Q ss_pred hhcCccCCcccccCcceEEEEEECC--------CCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcce---------
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE--------NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIK--------- 740 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~--------- 740 (997)
.++|++.+.||+|+||+||+|++.. .++.||||++... +.+.+|++++++++||||++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 3689999999999999999999986 3789999998643 35788999999999999988
Q ss_pred ------EEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEec
Q 001908 741 ------IITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHG 814 (997)
Q Consensus 741 ------l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 814 (997)
+++++. ......++||||+ +++|.+++.... ...+++..++.++.||+.||+|||++ +|+||
T Consensus 116 ~~~i~~~~~~~~----~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~ 183 (352)
T 2jii_A 116 LLAIPTCMGFGV----HQDKYRFLVLPSL-GRSLQSALDVSP----KHVLSERSVLQVACRLLDALEFLHEN---EYVHG 183 (352)
T ss_dssp TCSCCCCCEEEE----ETTTEEEEEEECC-CEEHHHHHHHSG----GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCS
T ss_pred ccCccchhhccc----cCCcEEEEEecCC-CcCHHHHHHhCC----cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCC
Confidence 444432 2356899999999 999999998752 12489999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCC--cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccch
Q 001908 815 DLKPSNVLLDHDM--VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGD 892 (997)
Q Consensus 815 Dlk~~NIll~~~~--~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~D 892 (997)
||||+||+++.++ .+||+|||+|+.......... ..........||+.|+|||++. +..++.++|
T Consensus 184 Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~D 250 (352)
T 2jii_A 184 NVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVA-YVEGSRSPHEGDLEFISMDLHK------------GCGPSRRSD 250 (352)
T ss_dssp CCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCC-CCTTSSCTTCSCTTTCCHHHHT------------TCCCCHHHH
T ss_pred CCCHHHEEEcCCCCceEEEecCcceeeccCCCcccc-ccccccccccCCccccCHHHHc------------cCCCCchhh
Confidence 9999999999998 999999999987633211110 1111223457999999997654 467899999
Q ss_pred hHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCC
Q 001908 893 VYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESP 972 (997)
Q Consensus 893 vwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP 972 (997)
||||||++|||++|+.||.........+....... ........++... ....+.++.+++.+||..||
T Consensus 251 i~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-----------~~~~~~~l~~li~~~l~~dp 318 (352)
T 2jii_A 251 LQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKF-VDKPGPFVGPCGH-----------WIRPSETLQKYLKVVMALTY 318 (352)
T ss_dssp HHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHH-HHSCCCEECTTSC-----------EECCCHHHHHHHHHHHTCCT
T ss_pred HHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhc-cCChhhhhhhccc-----------cCCCcHHHHHHHHHHHhCCh
Confidence 99999999999999999985432221121111100 0000000000000 00124568899999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhh
Q 001908 973 IERMEMRDVLAKLCAARQTLV 993 (997)
Q Consensus 973 ~~Rps~~evl~~L~~~~~~~~ 993 (997)
++||+++++++.|+++.++..
T Consensus 319 ~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 319 EEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TCCCCHHHHHHHHHHHHHHTT
T ss_pred hhCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999987653
No 228
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=5.7e-37 Score=341.39 Aligned_cols=270 Identities=19% Similarity=0.239 Sum_probs=209.4
Q ss_pred CCCHHHHHHHHHHHHhc-CCCCCCCCCC----CCCCCCCeeeeeeecC--------CCCcEEEEeccCCCCCCccccccc
Q 001908 29 HTNETDRLALLAIKSQL-HDPLGVTNSW----NNSINLCQWAGVTCGH--------RHQRVTELDLRHQNIGGSLSPYVG 95 (997)
Q Consensus 29 ~~~~~~~~aLl~~k~~~-~~~~~~~~sW----~~~~~~c~w~gv~C~~--------~~~~v~~L~L~~~~l~g~~~~~l~ 95 (997)
.+..+|++||++||+++ .||.+.+++| ....++|.|.||+|+. ...+|+.|+|++|++. .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 34578999999999997 6888888999 4567899999999952 4578999999999997 8999999
Q ss_pred CccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccc-------
Q 001908 96 NLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGY------- 168 (997)
Q Consensus 96 ~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~------- 168 (997)
++++|++|+|++|+++ .+|..++.+++|++|+|++|.++ .+|..++++++|++|++++|++.+.+|..++.
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 99999999999999999999999 99999999999999999999999999988753
Q ss_pred -cccccceeecccccccCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCcc
Q 001908 169 -SWLKLEHISLARNHLTGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQ 246 (997)
Q Consensus 169 -~l~~L~~L~L~~N~l~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~ 246 (997)
.+++|++|+|++|+++ .+|..++.++ +.+|++++|++++ +|+.++++++|++|+|++|.+.+.+|..++ .+++|+
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~-~l~~L~ 256 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFG-GRAPLK 256 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTT-CCCCCC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhc-CCCCCC
Confidence 4677888888888777 6666666653 4456666666663 555566666666666666666666665544 566666
Q ss_pred EEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCC
Q 001908 247 VFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLG 304 (997)
Q Consensus 247 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 304 (997)
+|+|++|.+.+.+|..+.++++|++|+|++|++.+.+|..|+.+++|+.+++..|.+.
T Consensus 257 ~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 257 RLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp EEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred EEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666666666666666666666666666666666666666655544
No 229
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=7.4e-37 Score=337.42 Aligned_cols=249 Identities=25% Similarity=0.356 Sum_probs=200.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
+.|+..+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~~ 96 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK-----DTKLW 96 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-----TTEEE
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec-----CCeEE
Confidence 56899999999999999999999899999999997432 3456788999999999999999999999643 45899
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLA 837 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a 837 (997)
+||||+++++|.+++... .+++..++.++.|++.||.|||+. +|+||||||+||+++.++.+||+|||.+
T Consensus 97 lv~e~~~~~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~ 166 (303)
T 3a7i_A 97 IIMEYLGGGSALDLLEPG-------PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVA 166 (303)
T ss_dssp EEEECCTTEEHHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred EEEEeCCCCcHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccc
Confidence 999999999999999754 388999999999999999999999 9999999999999999999999999999
Q ss_pred hhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCC
Q 001908 838 RFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGG 917 (997)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~ 917 (997)
...... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 167 ~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--- 223 (303)
T 3a7i_A 167 GQLTDT--------QIKRNTFVGTPFWMAPEVIK------------QSAYDSKADIWSLGITAIELARGEPPHSELH--- 223 (303)
T ss_dssp EECBTT--------BCCBCCCCSCGGGCCHHHHT------------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC---
T ss_pred eecCcc--------ccccCccCCCcCccCHHHHh------------cCCCCchhhhHHHHHHHHHHccCCCCCCCcC---
Confidence 765221 11223457899999997664 4668889999999999999999999987431
Q ss_pred ccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 918 LTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..+..... .....+... ..++..+.+++.+||+.||++|||+.|+++.
T Consensus 224 --~~~~~~~~-----~~~~~~~~~------------~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 224 --PMKVLFLI-----PKNNPPTLE------------GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp --HHHHHHHH-----HHSCCCCCC------------SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred --HHHHHHHh-----hcCCCCCCc------------cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 11111100 000111111 1124567899999999999999999999874
No 230
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1e-36 Score=340.69 Aligned_cols=271 Identities=23% Similarity=0.317 Sum_probs=197.6
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+..
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~~~ 99 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCK-----KKKRW 99 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-----ETTEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEee-----cCCEE
Confidence 57999999999999999999999899999999986432 334566789999999999999999999964 35589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.++..... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 100 ~lv~e~~~~~~l~~~~~~~~------~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 170 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFPN------GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGF 170 (331)
T ss_dssp EEEEECCSEEHHHHHHHSTT------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTT
T ss_pred EEEEecCCcchHHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCC
Confidence 99999999999988876544 488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++..... ........||+.|+|||.+.. ...++.++||||+||++|||++|+.||......
T Consensus 171 ~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~ 231 (331)
T 4aaa_A 171 ARTLAAP--------GEVYDDEVATRWYRAPELLVG-----------DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231 (331)
T ss_dssp C--------------------CCCCCTTCCHHHHTT-----------CTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred ceeecCC--------ccccCCCcCCccccCcccccC-----------CCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 9765221 112234568999999987642 236788999999999999999999998743211
Q ss_pred CccHHHHHHhh--cchhhhhhc--Ccccc----ccc-ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA--LPEKVMETV--DPSLL----LAW-SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~--~~~~~~~~~--d~~~~----~~~-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ......... ......... ++... ... ...........++..+.+++.+||..||++|||+.|+++
T Consensus 232 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 232 D-QLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp H-HHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred H-HHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 1 111111100 000000000 00000 000 000001111234567899999999999999999999875
No 231
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-36 Score=339.51 Aligned_cols=272 Identities=22% Similarity=0.279 Sum_probs=195.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 754 (997)
.++|+..+.||+|+||.||+|++..+|+.||||++.. ......+.+.+|++++++++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 3578999999999999999999999999999999853 23344577899999999999999999999975432 11224
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..|+||||+ +++|.+++.... +++..+..++.||++||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~~~-------l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Df 172 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKHEK-------LGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDF 172 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHHCC-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecC-CCCHHHHHhcCC-------CCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEee
Confidence 579999999 889999998743 78899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ......||+.|+|||++.. ...++.++||||+||++|||++|+.||....
T Consensus 173 g~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 230 (367)
T 1cm8_A 173 GLARQADS-----------EMTGYVVTRWYRAPEVILN-----------WMRYTQTVDIWSVGCIMAEMITGKTLFKGSD 230 (367)
T ss_dssp TTCEECCS-----------SCCSSCSCGGGCCTHHHHT-----------TTCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccccc-----------ccCcCcCCCCcCCHHHHhC-----------CCCCChhhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99986421 1234578999999987652 2568899999999999999999999997432
Q ss_pred CCCccHHHHHHhh--cchhhhhhcCccccc-------ccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA--LPEKVMETVDPSLLL-------AWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~~~~~~~~d~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+....... .+......+...... ...............+.+.+++.+|+..||++|||+.|+++
T Consensus 231 ~~-~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 231 HL-DQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HH-HHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HH-HHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11 0111111100 011111111000000 00000000011123456789999999999999999999976
No 232
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=3.8e-36 Score=330.85 Aligned_cols=259 Identities=24% Similarity=0.335 Sum_probs=202.9
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---------hhhHHHHHHHHHHHhhcC-CCCcceEEeeee
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---------KGALKSFVAECEVLRNTR-HRNLIKIITVCS 746 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~ 746 (997)
..++|++.+.||+|+||.||+|+++.+++.||||+++... ....+.+.+|+++++++. ||||+++++++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~- 93 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY- 93 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE-
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee-
Confidence 3468999999999999999999999999999999996432 223467789999999995 99999999995
Q ss_pred ccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC
Q 001908 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD 826 (997)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~ 826 (997)
......++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.+
T Consensus 94 ----~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~ 160 (298)
T 1phk_A 94 ----ETNTFFFLVFDLMKKGELFDYLTEKV------TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDD 160 (298)
T ss_dssp ----ECSSEEEEEEECCTTCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTT
T ss_pred ----ccCCeEEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCC
Confidence 34568999999999999999998754 488999999999999999999999 99999999999999999
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
+.+||+|||.+...... .......||+.|+|||++..... .....++.++||||||+++|||++|
T Consensus 161 ~~~kl~dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~------~~~~~~~~~~Di~slG~~l~~l~~g 225 (298)
T 1phk_A 161 MNIKLTDFGFSCQLDPG---------EKLREVCGTPSYLAPEIIECSMN------DNHPGYGKEVDMWSTGVIMYTLLAG 225 (298)
T ss_dssp CCEEECCCTTCEECCTT---------CCBCCCCSCGGGCCHHHHHHHHC------TTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred CcEEEecccchhhcCCC---------cccccccCCccccCHHHhccccc------cccccCCcccccHhHHHHHHHHHHC
Confidence 99999999999765221 12234568999999998753211 1235678899999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 907 RRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+.||.... ..+.......... ....+ ....++..+.+++.+||+.||++|||+.|+++
T Consensus 226 ~~p~~~~~-----~~~~~~~~~~~~~-~~~~~-------------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 226 SPPFWHRK-----QMLMLRMIMSGNY-QFGSP-------------EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp SCSSCCSS-----HHHHHHHHHHTCC-CCCTT-------------TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCCCcCcc-----HHHHHHHHhcCCc-ccCcc-------------cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 99986431 1111111100000 00000 01123457889999999999999999999975
No 233
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-36 Score=339.17 Aligned_cols=269 Identities=22% Similarity=0.309 Sum_probs=199.7
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
..++....++|++.+.||+|+||.||+|++..+++.||||++..... ..+.+.+|+++++++ +||||+++++++....
T Consensus 16 ~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 94 (326)
T 2x7f_A 16 LSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94 (326)
T ss_dssp CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC
T ss_pred chhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeecc
Confidence 33444566789999999999999999999998999999999974432 346788999999999 7999999999976532
Q ss_pred cC-CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 750 FK-GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 750 ~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
.. ..+..++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+. +|+||||||+||+++.++.
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~ 167 (326)
T 2x7f_A 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKG----NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAE 167 (326)
T ss_dssp --CCCCEEEEEEECCTTEEHHHHHHHSGG----GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCC
T ss_pred CccccceEEEEEEcCCCCcHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCC
Confidence 11 14678999999999999999987531 2488899999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||++...... ........||+.|+|||++... ...+..++.++|||||||++|||++|+.
T Consensus 168 ~kl~Dfg~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~~~Di~slG~il~~l~~g~~ 232 (326)
T 2x7f_A 168 VKLVDFGVSAQLDRT--------VGRRNTFIGTPYWMAPEVIACD-------ENPDATYDFKSDLWSLGITAIEMAEGAP 232 (326)
T ss_dssp EEECCCTTTC---------------------CCGGGCCHHHHC---------------CCTTHHHHHHHHHHHHHHHSSC
T ss_pred EEEeeCcCceecCcC--------ccccccccCCccccChhhhccc-------cccCcCCCccchHHHHHHHHHHHHhCCC
Confidence 999999998765211 1122345689999999887531 1124568899999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
||.... ........ .....+... ...++..+.+++.+||..||++||++.|+++
T Consensus 233 p~~~~~-----~~~~~~~~-----~~~~~~~~~-----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 233 PLCDMH-----PMRALFLI-----PRNPAPRLK-----------SKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp TTTTSC-----HHHHHHHH-----HHSCCCCCS-----------CSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCCc-----HHHHHHHh-----hcCccccCC-----------ccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 986431 11111100 011111110 0112456789999999999999999999976
No 234
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.4e-37 Score=335.05 Aligned_cols=250 Identities=19% Similarity=0.289 Sum_probs=201.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++. ..+
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-----~~~ 88 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DND 88 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeec-----cCC
Confidence 46799999999999999999999999999999998643 3345678899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 159 (294)
T 2rku_A 89 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 159 (294)
T ss_dssp EEEEEEECCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCC
T ss_pred EEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEec
Confidence 8999999999999999988754 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|.++..... ........||+.|+|||.+. +..++.++||||+|+++|||++|+.||....
T Consensus 160 g~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 219 (294)
T 2rku_A 160 GLATKVEYD--------GERKKVLCGTPNYIAPEVLS------------KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219 (294)
T ss_dssp TTCEECCST--------TCCBCCCCSCCSSCCHHHHT------------TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cCceecccC--------ccccccccCCCCcCCcchhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 999765211 11223356899999997654 4567889999999999999999999987431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
..+........ .... +......+.+++.+||+.||++|||+.|+++.
T Consensus 220 -----~~~~~~~~~~~------~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 220 -----LKETYLRIKKN------EYSI------------PKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -----HHHHHHHHHTT------CCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -----HHHHHHHHhhc------cCCC------------ccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111111000 0000 01123467789999999999999999999863
No 235
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.9e-37 Score=368.41 Aligned_cols=258 Identities=28% Similarity=0.425 Sum_probs=204.2
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.++||+|+||+||+|+++ .+..||||+++.... ..+.+.+|++++++++|+||+++++++.. +..
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~ 336 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE------EPI 336 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS------SSC
T ss_pred chhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee------ccc
Confidence 3467889999999999999999997 457799999975432 34678999999999999999999998642 468
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++|+|.++++...+ ..+++.+++.++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+
T Consensus 337 ~lv~e~~~~gsL~~~l~~~~~----~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~ 409 (535)
T 2h8h_A 337 YIVTEYMSKGSLLDFLKGETG----KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGL 409 (535)
T ss_dssp EEEECCCTTEEHHHHHSHHHH----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTS
T ss_pred eEeeehhcCCcHHHHHhhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEccccc
Confidence 999999999999999986421 1378999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCCCcCcC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPTNCMFQ 915 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~~~~~~ 915 (997)
++.... ..........++..|+|||++. +..++.++|||||||++|||+| |+.||....
T Consensus 410 a~~~~~-------~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~- 469 (535)
T 2h8h_A 410 ARLIED-------NEYTARQGAKFPIKWTAPEAAL------------YGRFTIKSDVWSFGILLTELTTKGRVPYPGMV- 469 (535)
T ss_dssp TTTCCC-------HHHHTTCSTTSCGGGSCHHHHH------------HCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC-
T ss_pred ceecCC-------CceecccCCcCcccccCHHHhc------------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC-
Confidence 986521 1111122345678999997664 4568999999999999999999 999987431
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
..+...... ... +.+.+..++..+.++|.+||+.||++|||+.++++.|+++..
T Consensus 470 ----~~~~~~~i~-----~~~------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 470 ----NREVLDQVE-----RGY------------RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523 (535)
T ss_dssp ----HHHHHHHHH-----TTC------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSC
T ss_pred ----HHHHHHHHH-----cCC------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhh
Confidence 112111110 000 011122346678899999999999999999999999987654
No 236
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=7e-37 Score=338.64 Aligned_cols=254 Identities=29% Similarity=0.477 Sum_probs=232.8
Q ss_pred ccccccccCccccc--ccCCCCCCCCCCCEEeccC-CCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeE
Q 001908 347 TMTDIYMGVNQISG--TIPSGIGNLVNLNLLGIEF-NQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDL 423 (997)
Q Consensus 347 ~L~~L~l~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 423 (997)
.++.|++++|.+++ .+|..|+++++|++|+|++ |++++.+|..|+++++|++|+|++|++++.+|..|.++++|++|
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L 130 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTL 130 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEE
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEE
Confidence 45566666666666 6777888889999999994 99999999999999999999999999998999999999999999
Q ss_pred EeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccc-ccccccccCCCcccCCCccccccccccceecccccc
Q 001908 424 FLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTIT-TLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQ 502 (997)
Q Consensus 424 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 502 (997)
+|++|++++.+|..|..+++|++|+|++|++++.+|..+..+. .+ +.|++++|++++.+|..+..++ |+.|++++|+
T Consensus 131 ~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L-~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~ 208 (313)
T 1ogq_A 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLF-TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNM 208 (313)
T ss_dssp ECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTC-CEEECCSSEEEEECCGGGGGCC-CSEEECCSSE
T ss_pred eCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcC-cEEECcCCeeeccCChHHhCCc-ccEEECcCCc
Confidence 9999999999999999999999999999999999999999988 55 9999999999999999999987 9999999999
Q ss_pred ccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 503 FSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 503 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
+++.+|..|..+++|+.|+|++|++++.+|. +..+++|++|+|++|++++.+|..+..+++|++|+|++|+++|.+|..
T Consensus 209 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~ 287 (313)
T 1ogq_A 209 LEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG 287 (313)
T ss_dssp EEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS
T ss_pred ccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCC
Confidence 9999999999999999999999999977775 889999999999999999999999999999999999999999999999
Q ss_pred CcCCCCcceeecCCCCcCCCC
Q 001908 583 GVFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 583 ~~~~~~~~~~~~~N~~~C~~~ 603 (997)
+.+++++.+++.+||++||.+
T Consensus 288 ~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 288 GNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp TTGGGSCGGGTCSSSEEESTT
T ss_pred ccccccChHHhcCCCCccCCC
Confidence 889999999999999999853
No 237
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.3e-36 Score=332.13 Aligned_cols=247 Identities=22% Similarity=0.336 Sum_probs=199.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|++.+.||+|+||.||+|+...+++.||+|++.... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 87 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH-----DRK 87 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE-----cCC
Confidence 368999999999999999999999899999999986432 223467899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++|+|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Df 158 (284)
T 2vgo_A 88 RIYLMLEFAPRGELYKELQKHG------RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADF 158 (284)
T ss_dssp EEEEEECCCTTEEHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCC
T ss_pred EEEEEEEeCCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecc
Confidence 8999999999999999998754 478999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|++..... .......|++.|+|||.+. +..++.++||||||+++|||++|+.||....
T Consensus 159 g~~~~~~~----------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 216 (284)
T 2vgo_A 159 GWSVHAPS----------LRRRTMCGTLDYLPPEMIE------------GKTHDEKVDLWCAGVLCYEFLVGMPPFDSPS 216 (284)
T ss_dssp TTCEECSS----------SCBCCCCSCGGGCCHHHHT------------TCCBCTTHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cccccCcc----------cccccccCCCCcCCHHHhc------------cCCCCcccchhhHHHHHHHHHHCCCCCCCCC
Confidence 99865421 1123357899999997654 4668899999999999999999999987431
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+....... .+... +...+..+.+++.+||+.||++||++.|+++
T Consensus 217 -----~~~~~~~~~~------~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 217 -----HTETHRRIVN------VDLKF------------PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -----HHHHHHHHHT------TCCCC------------CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -----HhHHHHHHhc------cccCC------------CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1111111100 01110 0112356789999999999999999999986
No 238
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=2.5e-36 Score=336.86 Aligned_cols=266 Identities=19% Similarity=0.229 Sum_probs=203.5
Q ss_pred CCccChHHHHHHhhcCccC-CcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhc-CCCCcceE
Q 001908 666 FPMVSYSELSEATNEFSSS-NMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNT-RHRNLIKI 741 (997)
Q Consensus 666 ~~~~~~~~~~~~~~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~l 741 (997)
.+...+...+...+.|.+. +.||+|+||+||+|+...+++.||+|+++... ......+.+|+.+++++ +||||+++
T Consensus 15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~ 94 (327)
T 3lm5_A 15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINL 94 (327)
T ss_dssp -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCE
T ss_pred chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEE
Confidence 3444555566777888887 89999999999999999999999999997432 23457889999999999 57999999
Q ss_pred EeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCe
Q 001908 742 ITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNV 821 (997)
Q Consensus 742 ~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NI 821 (997)
++++ ...+..++||||+++|+|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||
T Consensus 95 ~~~~-----~~~~~~~lv~e~~~~~~L~~~~~~~~~----~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NI 162 (327)
T 3lm5_A 95 HEVY-----ENTSEIILILEYAAGGEIFSLCLPELA----EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNI 162 (327)
T ss_dssp EEEE-----ECSSEEEEEEECCTTEEGGGGGSSCC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGE
T ss_pred EEEE-----EeCCeEEEEEEecCCCcHHHHHHHhcc----cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHE
Confidence 9995 445689999999999999999865432 2488999999999999999999999 999999999999
Q ss_pred eeCC---CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 822 LLDH---DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 822 ll~~---~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+++. ++.+||+|||+++..... .......||+.|+|||++. +..++.++||||+||
T Consensus 163 l~~~~~~~~~~kL~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~ 221 (327)
T 3lm5_A 163 LLSSIYPLGDIKIVDFGMSRKIGHA---------CELREIMGTPEYLAPEILN------------YDPITTATDMWNIGI 221 (327)
T ss_dssp EESCBTTBCCEEECCGGGCEEC------------------CCCGGGCCHHHHT------------TCCCCTHHHHHHHHH
T ss_pred EEecCCCCCcEEEeeCccccccCCc---------cccccccCCcCccCCeeec------------CCCCCchhhHHHHHH
Confidence 9998 789999999999865221 1123357999999997654 567889999999999
Q ss_pred HHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 899 MLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 899 vl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
++|||++|+.||.... ..+...... .. .... .......++..+.+++.+||..||++|||+
T Consensus 222 il~~ll~g~~pf~~~~-----~~~~~~~i~-----~~-~~~~--------~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 282 (327)
T 3lm5_A 222 IAYMLLTHTSPFVGED-----NQETYLNIS-----QV-NVDY--------SEETFSSVSQLATDFIQSLLVKNPEKRPTA 282 (327)
T ss_dssp HHHHHHHSSCSSCCSS-----HHHHHHHHH-----HT-CCCC--------CTTTTTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred HHHHHHhCCCCCCCCC-----chHHHHHHH-----hc-cccc--------CchhhcccCHHHHHHHHHHcCCChhhCcCH
Confidence 9999999999997431 111111100 00 0000 000011234567899999999999999999
Q ss_pred HHHHH
Q 001908 979 RDVLA 983 (997)
Q Consensus 979 ~evl~ 983 (997)
.|+++
T Consensus 283 ~~ll~ 287 (327)
T 3lm5_A 283 EICLS 287 (327)
T ss_dssp HHHTT
T ss_pred HHHhC
Confidence 99975
No 239
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.6e-36 Score=346.24 Aligned_cols=262 Identities=25% Similarity=0.379 Sum_probs=193.5
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcC--CCCcceEEeeeeccCcCCCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTR--HRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~ 754 (997)
+.|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++ ||||+++++++. ..+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~-----~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-----TDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSS
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEe-----cCC
Confidence 46999999999999999999987 4899999998643 3445678899999999996 599999999854 345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||| +.+++|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++ ++.+||+||
T Consensus 130 ~~~lv~E-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DF 198 (390)
T 2zmd_A 130 YIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDF 198 (390)
T ss_dssp EEEEEEE-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCC
T ss_pred EEEEEEe-cCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEec
Confidence 7999999 55889999998764 478889999999999999999999 999999999999995 689999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+...... .........||+.|+|||++........ .......++.++|||||||++|||++|+.||....
T Consensus 199 G~a~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~ 271 (390)
T 2zmd_A 199 GIANQMQPDT------TSVVKDSQVGAVNYMPPEAIKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII 271 (390)
T ss_dssp SSSCCC---------------CCSCCCGGGCCHHHHHCC-------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CccccccCCC------ccccCCCCCcCCCccChHHhhhcccccc-ccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence 9998652211 1112234579999999998864211000 00112468899999999999999999999997432
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
.. .... ....++.....+.. ....++.+++.+||..||++|||+.|+++.
T Consensus 272 ~~---~~~~---------~~~~~~~~~~~~~~--------~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 272 NQ---ISKL---------HAIIDPNHEIEFPD--------IPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp CH---HHHH---------HHHHCTTSCCCCCC--------CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HH---HHHH---------HHHhCccccCCCCc--------cchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11 1111 11111111111110 113467899999999999999999999753
No 240
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=7e-36 Score=348.10 Aligned_cols=272 Identities=22% Similarity=0.267 Sum_probs=205.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
.++|++.++||+|+||.||+|++..+++.||||++...... ..+.+|+++++.++|++.+..+.++. ...+..+
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~----~~~~~~~ 79 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFG----VEGDYNV 79 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEE----EETTEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEE----eeCCEEE
Confidence 46899999999999999999999889999999998643322 35788999999998755444444432 2356789
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee---CCCCcEEEccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL---DHDMVAHVSDF 834 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll---~~~~~~kl~DF 834 (997)
+||||+ +++|.+++..... .+++..++.++.||+.||+|||++ +|+||||||+|||+ +.++.+||+||
T Consensus 80 lvme~~-g~sL~~ll~~~~~-----~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DF 150 (483)
T 3sv0_A 80 LVMDLL-GPSLEDLFNFCSR-----KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDF 150 (483)
T ss_dssp EEEECC-CCBHHHHHHHTTT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCC
T ss_pred EEEECC-CCCHHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeC
Confidence 999999 9999999986432 489999999999999999999999 99999999999999 68899999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.......... ..........||+.|+|||.+. +..++.++|||||||++|||++|+.||....
T Consensus 151 Gla~~~~~~~~~~~-~~~~~~~~~~gt~~Y~aPE~~~------------~~~~s~~sDvwSlGvil~elltG~~Pf~~~~ 217 (483)
T 3sv0_A 151 GLAKKYRDTSTHQH-IPYRENKNLTGTARYASVNTHL------------GIEQSRRDDLESLGYVLMYFLRGSLPWQGLK 217 (483)
T ss_dssp TTCEECBCTTTCCB-CCCCCCCCCCSCTTTCCHHHHT------------TCCCCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred CcceeccCCccccc-cccccccccCCCccccCHHHhc------------CCCCChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 99987643221110 1112233567999999996554 5678999999999999999999999998543
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
... ..+.............+ ......++.++.+++..||..+|++||++.++++.|+++....
T Consensus 218 ~~~--~~~~~~~i~~~~~~~~~-------------~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 218 AGT--KKQKYEKISEKKVATSI-------------EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp CSS--HHHHHHHHHHHHHHSCH-------------HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred chh--HHHHHHHHhhccccccH-------------HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 221 11111111111110000 0111234567899999999999999999999999999987654
No 241
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.2e-36 Score=332.12 Aligned_cols=278 Identities=18% Similarity=0.266 Sum_probs=197.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC--------
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-------- 749 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-------- 749 (997)
.++|++.+.||+|+||.||+|++..+++.||+|++........+.+.+|++++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 357899999999999999999999899999999998766667788999999999999999999999874321
Q ss_pred -cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-CCC
Q 001908 750 -FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDM 827 (997)
Q Consensus 750 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~~~ 827 (997)
.......++||||++ |+|.+++... .+++..++.++.|++.||+|||++ +|+||||||+||+++ +++
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~ 158 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-------PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDL 158 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-------CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTT
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-------CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCC
Confidence 234567899999997 6999999753 378899999999999999999999 999999999999997 567
Q ss_pred cEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCC
Q 001908 828 VAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRR 907 (997)
Q Consensus 828 ~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~ 907 (997)
.+||+|||.++...... ..........+|..|+|||.+.. ...++.++|||||||++|||++|+
T Consensus 159 ~~kl~Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~el~~g~ 222 (320)
T 2i6l_A 159 VLKIGDFGLARIMDPHY-----SHKGHLSEGLVTKWYRSPRLLLS-----------PNNYTKAIDMWAAGCIFAEMLTGK 222 (320)
T ss_dssp EEEECCCTTCBCC-------------CCCGGGSCCTTCCHHHHHC-----------TTCCCHHHHHHHHHHHHHHHHHSS
T ss_pred eEEEccCccccccCCCc-----ccccccccccccccccCcHHhcC-----------cccCCchhhhHhHHHHHHHHHhCC
Confidence 99999999998652211 11112234567999999986642 256889999999999999999999
Q ss_pred CCCCcCcCCCccHHHHHHhhc--ch----hhhhhcCcccccccc--cchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHH
Q 001908 908 RPTNCMFQGGLTLHEFCKMAL--PE----KVMETVDPSLLLAWS--DGRRRAKVEECLVTVIRIGVACSMESPIERMEMR 979 (997)
Q Consensus 908 ~P~~~~~~~~~~~~~~~~~~~--~~----~~~~~~d~~~~~~~~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ 979 (997)
.||...... ........... .. ............... ..........++.++.+++.+||+.||++|||++
T Consensus 223 ~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (320)
T 2i6l_A 223 TLFAGAHEL-EQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAE 301 (320)
T ss_dssp CSSCCSSHH-HHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred CCCCCCCHH-HHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHH
Confidence 999743211 01111111100 00 000000000000000 0000011123456788999999999999999999
Q ss_pred HHHH
Q 001908 980 DVLA 983 (997)
Q Consensus 980 evl~ 983 (997)
|+++
T Consensus 302 ell~ 305 (320)
T 2i6l_A 302 EALS 305 (320)
T ss_dssp HHHT
T ss_pred HHhC
Confidence 9976
No 242
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=330.85 Aligned_cols=255 Identities=24% Similarity=0.335 Sum_probs=196.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceEEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
+|.....||+|+||.||+|++..+++.||||++........+.+.+|+.+++.++||||+++++++.. .+..++|
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-----~~~~~lv 97 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-----NGFIKIF 97 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEEEEE
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe-----CCcEEEE
Confidence 44555699999999999999998999999999986666666789999999999999999999999643 4589999
Q ss_pred EeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-CCcEEEcccccch
Q 001908 760 YEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-DMVAHVSDFGLAR 838 (997)
Q Consensus 760 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-~~~~kl~DFg~a~ 838 (997)
|||+++++|.+++..... ...+++..+..++.|++.||+|||++ +|+||||||+||+++. ++.+||+|||.++
T Consensus 98 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~ 171 (295)
T 2clq_A 98 MEQVPGGSLSALLRSKWG---PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK 171 (295)
T ss_dssp EECCSEEEHHHHHHHTTC---CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCE
T ss_pred EEeCCCCCHHHHHHhhcc---CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeeccccc
Confidence 999999999999987532 12467889999999999999999999 9999999999999987 8999999999997
Q ss_pred hcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCc
Q 001908 839 FLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGL 918 (997)
Q Consensus 839 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~ 918 (997)
..... ........||+.|+|||++... ...++.++|||||||++|||++|+.||......
T Consensus 172 ~~~~~--------~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-- 231 (295)
T 2clq_A 172 RLAGI--------NPCTETFTGTLQYMAPEIIDKG----------PRGYGKAADIWSLGCTIIEMATGKPPFYELGEP-- 231 (295)
T ss_dssp ESCC-------------CCCCCCGGGCCHHHHHHG----------GGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSH--
T ss_pred ccCCC--------CCcccccCCCccccChhhhcCC----------CCCCCcHHHHHHHHHHHHHHHHCCCCccCCCch--
Confidence 65221 1112345689999999887531 123788999999999999999999998743211
Q ss_pred cHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 919 TLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 919 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
....... ......+.. +..++.++.+++.+||+.||++||++.|+++
T Consensus 232 -~~~~~~~-----~~~~~~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 232 -QAAMFKV-----GMFKVHPEI------------PESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp -HHHHHHH-----HHHCCCCCC------------CTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred -hHHHHhh-----ccccccccc------------cccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1111000 000111111 1123456789999999999999999999975
No 243
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=9.1e-37 Score=336.61 Aligned_cols=272 Identities=19% Similarity=0.279 Sum_probs=182.7
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
...++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~ 86 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFV-----VKD 86 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEE-----SSS
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEe-----ecC
Confidence 34578999999999999999999998899999999986432 334567889999999999999999999964 345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCC--CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNG--QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~--~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
..++||||+++++|.+++..... ......+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+
T Consensus 87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~ 163 (303)
T 2vwi_A 87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIA 163 (303)
T ss_dssp CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEEC
T ss_pred CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEE
Confidence 79999999999999999975210 11122488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.+........ ...........||+.|+|||++.. ...++.++|||||||++|||++|+.||..
T Consensus 164 dfg~~~~~~~~~~---~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~~l~~g~~pf~~ 229 (303)
T 2vwi_A 164 DFGVSAFLATGGD---ITRNKVRKTFVGTPCWMAPEVMEQ-----------VRGYDFKADIWSFGITAIELATGAAPYHK 229 (303)
T ss_dssp CCHHHHHCC------------------CCCTTCCHHHHHH-----------HHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred eccchheeccCCC---ccchhhhcccCCCccccCHHHhcc-----------ccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 9999987632111 011112234578999999987753 13478899999999999999999999975
Q ss_pred CcCCCccHHHHHHhhcchhhh-hhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 913 MFQGGLTLHEFCKMALPEKVM-ETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... .........+.... ...++.. ...++.++.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 230 YPPMK--VLMLTLQNDPPSLETGVQDKEM------------LKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp SCGGG--HHHHHHTSSCCCTTC-----CC------------CCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cchhh--HHHHHhccCCCccccccccchh------------hhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 42211 11100000000000 0001111 0122456789999999999999999999986
No 244
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.1e-36 Score=340.99 Aligned_cols=249 Identities=19% Similarity=0.289 Sum_probs=201.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
.++|.+.+.||+|+||.||+|++..+++.||+|++... .....+.+.+|++++++++|+||+++++++. ..+
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-----~~~ 114 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFE-----DND 114 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSS
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----cCC
Confidence 36799999999999999999999999999999998643 3345678899999999999999999999954 456
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||+++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 115 ~~~lv~e~~~~~~L~~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 185 (335)
T 2owb_A 115 FVFVVLELCRRRSLLELHKRRK------ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDF 185 (335)
T ss_dssp EEEEEECCCTTCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCC
T ss_pred eEEEEEecCCCCCHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeec
Confidence 8999999999999999988754 488999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++..... ........||+.|+|||++. +..++.++|||||||++|||++|+.||....
T Consensus 186 g~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 245 (335)
T 2owb_A 186 GLATKVEYD--------GERKKVLCGTPNYIAPEVLS------------KKGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245 (335)
T ss_dssp TTCEECCST--------TCCBCCCCSCCSSCCHHHHH------------TSCBCTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred cCceecccC--------cccccccCCCccccCHHHhc------------cCCCCchhhHHHHHHHHHHHHHCcCCCCCCC
Confidence 999865221 11223457899999997764 4567889999999999999999999987421
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+........ .... +..+...+.+++.+||+.||++|||+.|+++
T Consensus 246 -----~~~~~~~~~~~------~~~~------------~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 246 -----LKETYLRIKKN------EYSI------------PKHINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp -----HHHHHHHHHHT------CCCC------------CTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred -----HHHHHHHHhcC------CCCC------------CccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11111111000 0000 0112346778999999999999999999986
No 245
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1e-35 Score=337.79 Aligned_cols=269 Identities=20% Similarity=0.227 Sum_probs=193.7
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 754 (997)
.++|++.+.||+|+||.||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++.... .....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 35799999999999999999999989999999999642 3445577889999999999999999999975432 22334
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||++ |+|.+++.. .+++..+..++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 104 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 171 (371)
T 2xrw_A 104 DVYIVMELMD-ANLCQVIQM--------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDF 171 (371)
T ss_dssp EEEEEEECCS-EEHHHHHHS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCC
T ss_pred ceEEEEEcCC-CCHHHHHhh--------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEe
Confidence 7899999996 588888863 278889999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ........||+.|+|||++. +..++.++||||+||++|||++|+.||....
T Consensus 172 g~a~~~~~---------~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 230 (371)
T 2xrw_A 172 GLARTAGT---------SFMMTPYVVTRYYRAPEVIL------------GMGYKENVDIWSVGCIMGEMIKGGVLFPGTD 230 (371)
T ss_dssp CC-------------------------CTTCCHHHHT------------TCCCCTTHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccccc---------ccccCCceecCCccCHHHhc------------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99976521 11223457899999997664 4668899999999999999999999997432
Q ss_pred CCCccHHHHHHhh--cc---hhhhhhcCccc----------cc-----ccc---cchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 915 QGGLTLHEFCKMA--LP---EKVMETVDPSL----------LL-----AWS---DGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~---~~~~~~~d~~~----------~~-----~~~---~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
....+.... .. ........+.. .. .+. .............++.+++.+||..|
T Consensus 231 ----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d 306 (371)
T 2xrw_A 231 ----HIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 306 (371)
T ss_dssp ----HHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSS
T ss_pred ----HHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCC
Confidence 111111110 00 00000000000 00 000 00001122344677899999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|++|||++|+++
T Consensus 307 P~~R~t~~e~l~ 318 (371)
T 2xrw_A 307 ASKRISVDEALQ 318 (371)
T ss_dssp GGGSCCHHHHHH
T ss_pred hhhCCCHHHHhC
Confidence 999999999976
No 246
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.2e-36 Score=328.86 Aligned_cols=248 Identities=27% Similarity=0.386 Sum_probs=191.4
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++. ..+.
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~~~ 85 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIS-----TPTD 85 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CSSE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEe-----cCCe
Confidence 57999999999999999999999899999999996432 234567899999999999999999999954 4568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||+|||
T Consensus 86 ~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 156 (276)
T 2h6d_A 86 FFMVMEYVSGGELFDYICKHG------RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 156 (276)
T ss_dssp EEEEEECCCSCBHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCC
T ss_pred EEEEEeccCCCcHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecc
Confidence 999999999999999998754 478899999999999999999999 99999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCC-CCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSE-ASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~-~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
.+...... .......||+.|+|||.+. +.. .+.++||||+|+++|||++|+.||...
T Consensus 157 ~~~~~~~~---------~~~~~~~~~~~y~aPE~~~------------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~- 214 (276)
T 2h6d_A 157 LSNMMSDG---------EFLRTSCGSPNYAAPEVIS------------GRLYAGPEVDIWSCGVILYALLCGTLPFDDE- 214 (276)
T ss_dssp GGGCCCC----------------------CCTGGGT------------TSCCCHHHHHHHHHHHHHHHHHHSSCSSCCS-
T ss_pred cccccCCC---------cceecccCCccccCHHHHc------------CCCCCCccchHHHHHHHHHHHHhCCCCCCCC-
Confidence 99765221 1123356899999997664 233 367999999999999999999998642
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+...... ... ... +..++..+.+++.+||+.||++|||+.|+++.
T Consensus 215 ----~~~~~~~~~~-----~~~-~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 215 ----HVPTLFKKIR-----GGV-FYI------------PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----SHHHHHHHHH-----HCC-CCC------------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----cHHHHHHHhh-----cCc-ccC------------chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 1111111110 000 000 01123567899999999999999999999873
No 247
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=5.5e-36 Score=339.35 Aligned_cols=282 Identities=21% Similarity=0.226 Sum_probs=201.8
Q ss_pred ChHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc-----------hhhHHHHHHHHHHHhhcCCCCc
Q 001908 670 SYSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ-----------KGALKSFVAECEVLRNTRHRNL 738 (997)
Q Consensus 670 ~~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~-----------~~~~~~~~~E~~~l~~l~h~ni 738 (997)
...++....++|++.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|++++++++||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 34567788899999999999999999999987 59999999985321 1223788999999999999999
Q ss_pred ceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCC
Q 001908 739 IKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKP 818 (997)
Q Consensus 739 v~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~ 818 (997)
+++++++...+.......++||||++ |+|.+++.... ..+++..++.++.||+.||+|||++ +|+||||||
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp 162 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR-----IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHP 162 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT-----SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc-----cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCCh
Confidence 99999986544344567899999996 69999888653 2488999999999999999999999 999999999
Q ss_pred CCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 819 SNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 819 ~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
+||+++.++.+||+|||+|+.... ........||+.|+|||++.. ...++.++||||+||
T Consensus 163 ~NIl~~~~~~~kl~Dfg~~~~~~~---------~~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~ 222 (362)
T 3pg1_A 163 GNILLADNNDITICDFNLAREDTA---------DANKTHYVTHRWYRAPELVMQ-----------FKGFTKLVDMWSAGC 222 (362)
T ss_dssp GGEEECTTCCEEECCTTC------------------------CGGGCCHHHHTT-----------CTTCCTHHHHHHHHH
T ss_pred HHEEEcCCCCEEEEecCccccccc---------ccccceecccceecCcHHhcC-----------CCCCCcHhHHHhHHH
Confidence 999999999999999999975421 122234578999999976642 256889999999999
Q ss_pred HHHHHHhCCCCCCcCcCCCccHHHHHHhhc-c----------hhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhc
Q 001908 899 MLLEMFTRRRPTNCMFQGGLTLHEFCKMAL-P----------EKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVAC 967 (997)
Q Consensus 899 vl~elltg~~P~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 967 (997)
++|||++|+.||...... ........... + ............ ...............+.+.+++.+|
T Consensus 223 il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~ 300 (362)
T 3pg1_A 223 VMAEMFNRKALFRGSTFY-NQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLS-NVPARAWTAVVPTADPVALDLIAKM 300 (362)
T ss_dssp HHHHHHHSSCSCCCSSHH-HHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCC-CCCCCCHHHHSTTSCHHHHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCHH-HHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcc-cCChhhHHhhCCCCCHHHHHHHHHH
Confidence 999999999999743211 01111111100 0 000011111100 0001111111223356788999999
Q ss_pred CCCCCCCCCCHHHHHH
Q 001908 968 SMESPIERMEMRDVLA 983 (997)
Q Consensus 968 l~~dP~~Rps~~evl~ 983 (997)
|+.||++|||+.|+++
T Consensus 301 L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 301 LEFNPQRRISTEQALR 316 (362)
T ss_dssp TCSSGGGSCCHHHHHT
T ss_pred hcCChhhCCCHHHHHc
Confidence 9999999999999975
No 248
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=9.7e-38 Score=355.45 Aligned_cols=270 Identities=15% Similarity=0.165 Sum_probs=191.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc---cchhhHHHHHHHHH---HHhhcCCCCcceEEe-------e
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL---MQKGALKSFVAECE---VLRNTRHRNLIKIIT-------V 744 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~---~~~~~~~~~~~E~~---~l~~l~h~niv~l~~-------~ 744 (997)
.++|++.+.||+|+||+||+|++..+++.||||++.. ......+.+.+|++ ++++++||||+++++ +
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 4678899999999999999999988999999999973 33445678899995 455568999999984 3
Q ss_pred eeccC-------cCCCc-----eEEEEEeeccCCCHHHHhhcCCCCCC-cCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 745 CSSID-------FKGAD-----FKALVYEYMQNGSLEEWLHQSNGQPE-VCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 745 ~~~~~-------~~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~-~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
+.... +.+.+ ..++||||+ +|+|.+++.......+ ...+++..++.++.||+.||+|||++ +|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ce
Confidence 32210 00111 378999999 6899999987532111 11244678889999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+||||||+|||++.++.+||+|||+|+... .......| +.|+|||++........ .......++.++
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~g-~~y~aPE~~~~~~~~~~-~~~~~~~~~~~~ 294 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----------ARVVSSVS-RGFEPPELEARRATISY-HRDRRTLMTFSF 294 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----------CEEECCCC-TTCCCHHHHHHHTSTHH-HHCCEEECCHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----------CcccCCCC-cCccChhhhcccccccc-cccccccCChhh
Confidence 999999999999999999999999997531 12234567 99999988764200000 000012688999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|||||||++|||++|+.||....... ........ . ..++.++.+++.+||..|
T Consensus 295 DvwSlG~il~elltg~~Pf~~~~~~~----------~~~~~~~~--------~---------~~~~~~~~~li~~~L~~d 347 (377)
T 3byv_A 295 DAWALGLVIYWIWCADLPITKDAALG----------GSEWIFRS--------C---------KNIPQPVRALLEGFLRYP 347 (377)
T ss_dssp HHHHHHHHHHHHHHSSCCC------C----------CSGGGGSS--------C---------CCCCHHHHHHHHHHTCSS
T ss_pred hHHHHHHHHHHHHHCCCCCccccccc----------chhhhhhh--------c---------cCCCHHHHHHHHHHcCCC
Confidence 99999999999999999986432110 00000000 0 122456789999999999
Q ss_pred CCCCCCHHHHHH--HHHHHHHH
Q 001908 972 PIERMEMRDVLA--KLCAARQT 991 (997)
Q Consensus 972 P~~Rps~~evl~--~L~~~~~~ 991 (997)
|++|||+.|+++ .+.++.+.
T Consensus 348 p~~Rpt~~e~l~hp~f~~~~~~ 369 (377)
T 3byv_A 348 KEDRLLPLQAMETPEYEQLRTE 369 (377)
T ss_dssp GGGCCCHHHHHTSHHHHHHHHH
T ss_pred chhCCCHHHHhhChHHHHHHHH
Confidence 999999999986 45555443
No 249
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.3e-36 Score=344.82 Aligned_cols=278 Identities=19% Similarity=0.241 Sum_probs=196.5
Q ss_pred HHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc----
Q 001908 675 SEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF---- 750 (997)
Q Consensus 675 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~---- 750 (997)
+...++|++.+.||+|+||+||+|++..+++.||||++..... ...+|+++++.++||||+++++++.....
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~ 78 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPK 78 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccc
Confidence 3456789999999999999999999999999999999864322 22469999999999999999999754321
Q ss_pred -----------------------------CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHH
Q 001908 751 -----------------------------KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE 801 (997)
Q Consensus 751 -----------------------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~ 801 (997)
....+.++||||++ |+|.+.+...... ...+++..++.++.||++||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~--~~~l~~~~~~~i~~qi~~aL~ 155 (383)
T 3eb0_A 79 PPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS--GRSIPMNLISIYIYQLFRAVG 155 (383)
T ss_dssp -------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT--TCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHH
Confidence 23456889999997 5888777642110 124889999999999999999
Q ss_pred HHhhCCCCCcEecCCCCCCeeeC-CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccc
Q 001908 802 YLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLE 880 (997)
Q Consensus 802 yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e 880 (997)
|||++ +|+||||||+||+++ .++.+||+|||+|+..... .......||+.|+|||++..
T Consensus 156 ~LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~~~~t~~y~aPE~~~~-------- 215 (383)
T 3eb0_A 156 FIHSL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPS---------EPSVAYICSRFYRAPELMLG-------- 215 (383)
T ss_dssp HHHTT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTT---------SCCCCCCCCSSCCCHHHHTT--------
T ss_pred HHHHC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCC---------CCCcCcccCCCccCHHHhcC--------
Confidence 99999 999999999999997 6899999999999865221 12234578999999976642
Q ss_pred cCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhh-cc-hhhhhhcCcccccc----c-ccchhhhhH
Q 001908 881 YGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMA-LP-EKVMETVDPSLLLA----W-SDGRRRAKV 953 (997)
Q Consensus 881 ~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~----~-~~~~~~~~~ 953 (997)
...++.++||||+||++|||++|+.||...... ..+....... .+ .......++..... . ........+
T Consensus 216 ---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (383)
T 3eb0_A 216 ---ATEYTPSIDLWSIGCVFGELILGKPLFSGETSI-DQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291 (383)
T ss_dssp ---CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSC
T ss_pred ---CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCC
Confidence 234889999999999999999999999743211 1111111111 00 01111111111000 0 000011112
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 954 EECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 954 ~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..++.++.+++.+||..||++|||+.|+++
T Consensus 292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp TTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 234567889999999999999999999974
No 250
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=339.62 Aligned_cols=260 Identities=15% Similarity=0.105 Sum_probs=199.7
Q ss_pred HHhhcCccCCcccccCcceEEEEE-----ECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC---CCCcceEEeeeec
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGI-----LGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR---HRNLIKIITVCSS 747 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~-----~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~ 747 (997)
...++|.+.+.||+|+||+||+|. ...+++.||||+++... ...+.+|++++++++ |+||+++++++.
T Consensus 62 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~- 137 (365)
T 3e7e_A 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHL- 137 (365)
T ss_dssp CSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEE-
T ss_pred ECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeee-
Confidence 345789999999999999999994 56688999999997543 346677888887776 999999999964
Q ss_pred cCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC--
Q 001908 748 IDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-- 825 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-- 825 (997)
..+..++||||+++|+|.+++....... ...+++..++.++.||+.||+|||++ +|+||||||+|||++.
T Consensus 138 ----~~~~~~lv~e~~~~g~L~~~l~~~~~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~ 209 (365)
T 3e7e_A 138 ----FQNGSVLVGELYSYGTLLNAINLYKNTP-EKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGF 209 (365)
T ss_dssp ----CSSCEEEEECCCCSCBHHHHHHHHHTST-TCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGG
T ss_pred ----cCCCcEEEEeccCCCcHHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccc
Confidence 3457899999999999999998643211 12489999999999999999999999 9999999999999998
Q ss_pred ---------CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHH
Q 001908 826 ---------DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSL 896 (997)
Q Consensus 826 ---------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSl 896 (997)
++.+||+|||+|+..... ..........||+.|+|||++. +..++.++|||||
T Consensus 210 ~~~~~~~~~~~~~kl~DFG~a~~~~~~------~~~~~~~~~~gt~~y~aPE~~~------------~~~~~~~~Diwsl 271 (365)
T 3e7e_A 210 LEQDDEDDLSAGLALIDLGQSIDMKLF------PKGTIFTAKCETSGFQCVEMLS------------NKPWNYQIDYFGV 271 (365)
T ss_dssp TCC------CTTEEECCCTTCEEGGGS------CTTEEECCSSCTTSCCCHHHHT------------TCCBSTHHHHHHH
T ss_pred cCccccccccCCEEEeeCchhhhhhcc------CCCceeeeecCCCCCCChHHhc------------CCCCCccccHHHH
Confidence 899999999999754211 1122334567999999996654 5678999999999
Q ss_pred HHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCC-
Q 001908 897 GVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIER- 975 (997)
Q Consensus 897 Gvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R- 975 (997)
||++|||+||+.||.....+.. ..+...... + ....+.+++..|++.+|.+|
T Consensus 272 G~il~elltg~~pf~~~~~~~~----------------~~~~~~~~~-------~----~~~~~~~~~~~~l~~~p~~r~ 324 (365)
T 3e7e_A 272 AATVYCMLFGTYMKVKNEGGEC----------------KPEGLFRRL-------P----HLDMWNEFFHVMLNIPDCHHL 324 (365)
T ss_dssp HHHHHHHHHSSCCCEEEETTEE----------------EECSCCTTC-------S----SHHHHHHHHHHHHCCCCTTCC
T ss_pred HHHHHHHHhCCCccccCCCCce----------------eechhcccc-------C----cHHHHHHHHHHHcCCCCCCcc
Confidence 9999999999999864322110 000000000 1 13345678889999999998
Q ss_pred CCHHHHHHHHHHHHHHh
Q 001908 976 MEMRDVLAKLCAARQTL 992 (997)
Q Consensus 976 ps~~evl~~L~~~~~~~ 992 (997)
|+++++.+.|++..+..
T Consensus 325 ~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 325 PSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp CCHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 57888888888876653
No 251
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.2e-36 Score=364.37 Aligned_cols=245 Identities=23% Similarity=0.301 Sum_probs=198.6
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc---chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCC
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM---QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~ 752 (997)
..++|++.+.||+|+||.||+|+++.+++.||||+++.. .....+.+..|.+++..+ +|++|++++++ +.+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~-----~~~ 413 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSC-----FQT 413 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEE-----CBC
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE-----EEe
Confidence 346899999999999999999999999999999999742 234456788899999987 79999999998 566
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEc
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVS 832 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~ 832 (997)
.+..|+||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++++||+
T Consensus 414 ~~~~~lV~E~~~gg~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~ 484 (674)
T 3pfq_A 414 MDRLYFVMEYVNGGDLMYHIQQVG------RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIA 484 (674)
T ss_dssp SSEEEEEEECCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEEC
T ss_pred CCEEEEEEeCcCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEe
Confidence 778999999999999999998764 488999999999999999999999 99999999999999999999999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||+|+..... .......+||+.|+|||++. +..|+.++|||||||++|||++|+.||..
T Consensus 485 DFGla~~~~~~--------~~~~~~~~GT~~Y~APE~l~------------~~~~~~~~DvwSlGvilyelltG~~Pf~~ 544 (674)
T 3pfq_A 485 DFGMCKENIWD--------GVTTKTFCGTPDYIAPEIIA------------YQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544 (674)
T ss_dssp CCTTCEECCCT--------TCCBCCCCSCSSSCCHHHHT------------CCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ecceeeccccC--------CcccccccCCCcccCHhhhc------------CCCCCccceEechHHHHHHHHcCCCCCCC
Confidence 99999853211 12234568999999997654 56789999999999999999999999974
Q ss_pred CcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 913 MFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
. ...+......... ..+ +.....++.+++.+||..||++||++
T Consensus 545 ~-----~~~~~~~~i~~~~------~~~------------p~~~s~~~~~li~~lL~~dP~~R~~~ 587 (674)
T 3pfq_A 545 E-----DEDELFQSIMEHN------VAY------------PKSMSKEAVAICKGLMTKHPGKRLGC 587 (674)
T ss_dssp S-----SHHHHHHHHHSSC------CCC------------CTTSCHHHHHHHHHHSCSSSTTCTTC
T ss_pred C-----CHHHHHHHHHhCC------CCC------------CccCCHHHHHHHHHHccCCHHHCCCC
Confidence 3 1222222111110 000 01224567899999999999999997
No 252
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.3e-36 Score=331.30 Aligned_cols=262 Identities=26% Similarity=0.349 Sum_probs=194.0
Q ss_pred hhcCccCCcccccCcceEEEEEECC-CCc--EEEEEEeccc---chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGE-NGT--FVAVKILNLM---QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~--~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
.++|++.+.||+|+||+||+|++.. +++ .||||+++.. .....+.+.+|++++++++||||+++++++..
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 92 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc----
Confidence 3679999999999999999998642 333 6899998643 33456788999999999999999999998643
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
+..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.+||
T Consensus 93 --~~~~~v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl 162 (291)
T 1u46_A 93 --PPMKMVTELAPLGSLLDRLRKHQ-----GHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKI 162 (291)
T ss_dssp --SSCEEEEECCTTCBHHHHHHHHG-----GGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEE
T ss_pred --CCceeeEecccCCCHHHHHHhcc-----CCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEE
Confidence 23789999999999999998753 1378999999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+++...... ..........+|..|+|||.+. +..++.++|||||||++|||++ |+.||
T Consensus 163 ~Dfg~~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~~g~~p~ 225 (291)
T 1u46_A 163 GDFGLMRALPQND-----DHYVMQEHRKVPFAWCAPESLK------------TRTFSHASDTWMFGVTLWEMFTYGQEPW 225 (291)
T ss_dssp CCCTTCEECCC-C-----CEEEC-----CCGGGCCHHHHH------------HCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ccccccccccccc-----cchhhhccCCCCceeeCchhhc------------CCCCCchhhHHHHHHHHHHHHhCCCCCc
Confidence 9999998653211 1111223356788999998765 3557889999999999999999 99998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
.... ..+......... ... +.+..++.++.+++.+||..||++|||+.++++.|+++.+
T Consensus 226 ~~~~-----~~~~~~~~~~~~----~~~------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 284 (291)
T 1u46_A 226 IGLN-----GSQILHKIDKEG----ERL------------PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284 (291)
T ss_dssp TTCC-----HHHHHHHHHTSC----CCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred ccCC-----HHHHHHHHHccC----CCC------------CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCc
Confidence 7431 122111110000 000 0111235678899999999999999999999999998765
Q ss_pred H
Q 001908 991 T 991 (997)
Q Consensus 991 ~ 991 (997)
.
T Consensus 285 ~ 285 (291)
T 1u46_A 285 T 285 (291)
T ss_dssp -
T ss_pred c
Confidence 4
No 253
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-36 Score=341.48 Aligned_cols=257 Identities=21% Similarity=0.315 Sum_probs=198.5
Q ss_pred hhcCccCCcccccCcceEEEEEEC---CCCcEEEEEEecccc----hhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILG---ENGTFVAVKILNLMQ----KGALKSFVAECEVLRNT-RHRNLIKIITVCSSID 749 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~ 749 (997)
.++|++.+.||+|+||+||+|+.. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~--- 129 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ--- 129 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEE---
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEe---
Confidence 367999999999999999999984 588999999986422 23345677899999999 6999999999854
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
.....++||||+++|+|.+++.... .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+
T Consensus 130 --~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~ 198 (355)
T 1vzo_A 130 --TETKLHLILDYINGGELFTHLSQRE------RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198 (355)
T ss_dssp --ETTEEEEEECCCCSCBHHHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCE
T ss_pred --eCceEEEEeecCCCCCHHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcE
Confidence 3558999999999999999998754 478999999999999999999999 99999999999999999999
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+.... ..........||+.|+|||++... ...++.++|||||||++|||++|+.|
T Consensus 199 kl~DfG~a~~~~~-------~~~~~~~~~~gt~~y~aPE~~~~~----------~~~~~~~~DvwslG~il~ell~g~~p 261 (355)
T 1vzo_A 199 VLTDFGLSKEFVA-------DETERAYDFCGTIEYMAPDIVRGG----------DSGHDKAVDWWSLGVLMYELLTGASP 261 (355)
T ss_dssp EESCSSEEEECCG-------GGGGGGCGGGSCCTTCCHHHHTTC----------C---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred EEeeCCCCeeccc-------CCCCcccCcccCcCccChhhhcCC----------CCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 9999999976521 111223346799999999876521 13468899999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-----CHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-----EMRDVLAK 984 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-----s~~evl~~ 984 (997)
|....... ...+....... ..+.. +.++...+.+++.+||..||++|| +++|+++.
T Consensus 262 f~~~~~~~-~~~~~~~~~~~------~~~~~------------~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 262 FTVDGEKN-SQAEISRRILK------SEPPY------------PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp TSCTTSCC-CHHHHHHHHHH------CCCCC------------CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CccCCccc-hHHHHHHHHhc------cCCCC------------CcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 97443221 22222111110 00110 112245677999999999999999 99998764
No 254
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=329.61 Aligned_cols=252 Identities=25% Similarity=0.364 Sum_probs=194.9
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..++|++.+.||+|+||.||+|++..+++.||+|++.... ..+.+.+|++++++++||||+++++++.. ....
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 99 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFK-----NTDL 99 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEe-----CCEE
Confidence 4568999999999999999999999899999999997533 34678899999999999999999999643 4578
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||+++++|.+++.... ..+++..++.++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.
T Consensus 100 ~lv~e~~~~~~L~~~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~ 171 (314)
T 3com_A 100 WIVMEYCGAGSVSDIIRLRN-----KTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGV 171 (314)
T ss_dssp EEEEECCTTEEHHHHHHHHT-----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTT
T ss_pred EEEeecCCCCCHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeeccc
Confidence 99999999999999997433 1488999999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
+...... ........||+.|+|||.+. +..++.++|||||||++|||++|+.||.....
T Consensus 172 ~~~~~~~--------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~- 230 (314)
T 3com_A 172 AGQLTDT--------MAKRNTVIGTPFWMAPEVIQ------------EIGYNCVADIWSLGITAIEMAEGKPPYADIHP- 230 (314)
T ss_dssp CEECBTT--------BSCBCCCCSCGGGCCHHHHS------------SSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-
T ss_pred chhhhhh--------ccccCccCCCCCccChhhcC------------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 9765221 11223456899999997654 45688999999999999999999999874311
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ... .....+.. ..+..++..+.+++.+||..||++|||+.|+++
T Consensus 231 ---~~~~-~~~-----~~~~~~~~----------~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 231 ---MRAI-FMI-----PTNPPPTF----------RKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---HHHH-HHH-----HHSCCCCC----------SSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---HHHH-HHH-----hcCCCccc----------CCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1111 100 00001110 001123456789999999999999999999975
No 255
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=3.2e-36 Score=340.61 Aligned_cols=272 Identities=21% Similarity=0.256 Sum_probs=184.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~ 754 (997)
.++|++.+.||+|+||.||+|.+..+|+.||||++.. ......+.+.+|++++++++||||+++++++.... .....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 3689999999999999999999999999999999864 23345578889999999999999999999975421 12235
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++|+||+ +++|.+++... .+++..++.++.||++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~~-------~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DF 176 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKCQ-------KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDF 176 (367)
T ss_dssp CCEEEEECC-CEECC-----C-------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-
T ss_pred eEEEEeccc-CCCHHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeec
Confidence 689999999 78999988763 388999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ......||+.|+|||++.. ...++.++||||+||++|||++|+.||....
T Consensus 177 G~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~ell~g~~pf~~~~ 234 (367)
T 2fst_X 177 GLARHTAD-----------EMTGYVATRWYRAPEIMLN-----------WMHYNQTVDIWSVGCIMAELLTGRTLFPGTD 234 (367)
T ss_dssp -------------------------CCCTTCCHHHHTT-----------CCSCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred cccccccc-----------cCCCcCcCcCccChHHHcC-----------CcCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99976421 1234578999999987642 2568899999999999999999999997432
Q ss_pred CCCccHHHHHHhh-cc-hhhhhhcCcccc----ccc---ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA-LP-EKVMETVDPSLL----LAW---SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~-~~-~~~~~~~d~~~~----~~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+....... .+ ......+..... ... .............+.+.+++.+||..||++|||+.|+++
T Consensus 235 ~~-~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 235 HI-DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp HH-HHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HH-HHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 11 0111111110 00 011110100000 000 000000001123456789999999999999999999975
No 256
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=1.2e-36 Score=345.87 Aligned_cols=262 Identities=10% Similarity=0.007 Sum_probs=180.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhc--CCCCcceEEe-------ee
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNT--RHRNLIKIIT-------VC 745 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l--~h~niv~l~~-------~~ 745 (997)
..+|++.+.||+|+||+||+|++..+++.||||++.... ....+.+.+|+++++.+ +||||++++. ++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 346889999999999999999999899999999997533 33456778886655555 6999888553 22
Q ss_pred eccCc------------CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHH------HHHHHHHHHHHHHHhhCC
Q 001908 746 SSIDF------------KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQR------LNIAIDMASAIEYLHHHC 807 (997)
Q Consensus 746 ~~~~~------------~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~------~~i~~~i~~~L~yLH~~~ 807 (997)
..... ......++||||++ |+|.+++..... .+.+..+ ..++.||+.||+|||++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~-----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~- 213 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF-----VYVFRGDEGILALHILTAQLIRLAANLQSK- 213 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc-----ccchhhhhhhhhHHHHHHHHHHHHHHHHHC-
Confidence 11100 00145899999998 899999987531 1233445 67889999999999999
Q ss_pred CCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCC
Q 001908 808 QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEA 887 (997)
Q Consensus 808 ~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~ 887 (997)
+|+||||||+|||++.++.+||+|||+|+... .......+|+.|+|||++.. ....+
T Consensus 214 --~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~~t~~y~aPE~~~~----------~~~~~ 270 (371)
T 3q60_A 214 --GLVHGHFTPDNLFIMPDGRLMLGDVSALWKVG-----------TRGPASSVPVTYAPREFLNA----------STATF 270 (371)
T ss_dssp --TEEETTCSGGGEEECTTSCEEECCGGGEEETT-----------CEEEGGGSCGGGCCHHHHTC----------SEEEC
T ss_pred --CCccCcCCHHHEEECCCCCEEEEecceeeecC-----------CCccCccCCcCCcChhhccC----------CCCCc
Confidence 99999999999999999999999999998541 11113457799999977642 01468
Q ss_pred CccchhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhc
Q 001908 888 SVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVAC 967 (997)
Q Consensus 888 ~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~c 967 (997)
+.++|||||||++|||+||+.||......... .+ ............ ...+....++..+.+++.+|
T Consensus 271 ~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~--~~----~~~~~~~~~~~~--------~~~~~~~~~~~~~~~li~~~ 336 (371)
T 3q60_A 271 THALNAWQLGLSIYRVWCLFLPFGLVTPGIKG--SW----KRPSLRVPGTDS--------LAFGSCTPLPDFVKTLIGRF 336 (371)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT--CC----CBCCTTSCCCCS--------CCCTTSSCCCHHHHHHHHHH
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCcCccccc--ch----hhhhhhhccccc--------cchhhccCCCHHHHHHHHHH
Confidence 89999999999999999999999854221100 00 000000000000 00011113356788999999
Q ss_pred CCCCCCCCCCHHHHHH
Q 001908 968 SMESPIERMEMRDVLA 983 (997)
Q Consensus 968 l~~dP~~Rps~~evl~ 983 (997)
|+.||++|||+.|+++
T Consensus 337 L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 337 LNFDRRRRLLPLEAME 352 (371)
T ss_dssp TCSSTTTCCCHHHHTT
T ss_pred cCCChhhCCCHHHHhc
Confidence 9999999999999974
No 257
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=5.4e-36 Score=346.21 Aligned_cols=199 Identities=25% Similarity=0.331 Sum_probs=168.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc------CCCCcceEEeeeeccCcC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT------RHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~l~~~~~~~~~~ 751 (997)
..+|++.+.||+|+||+||+|++..+++.||||+++.. ....+.+.+|+++++.+ +|+||+++++++..
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~---- 170 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTF---- 170 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEE----
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeeccc----
Confidence 35799999999999999999999989999999999753 23346677888888877 57799999998543
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc--E
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV--A 829 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~--~ 829 (997)
....++||||++ ++|.+++...... .+++..++.++.||+.||+|||++ +|+||||||+|||++.++. +
T Consensus 171 -~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~v 241 (429)
T 3kvw_A 171 -RNHICMTFELLS-MNLYELIKKNKFQ----GFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGI 241 (429)
T ss_dssp -TTEEEEEECCCC-CBHHHHHHHTTTC----CCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCE
T ss_pred -CCeEEEEEeccC-CCHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcce
Confidence 468999999995 6999999876522 488999999999999999999999 9999999999999999987 9
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+|+.... ......||+.|+|||++. +..++.++|||||||++|||+||++|
T Consensus 242 kL~DFG~a~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~DiwSlG~il~elltG~~p 298 (429)
T 3kvw_A 242 KVIDFGSSCYEHQ-----------RVYTYIQSRFYRAPEVIL------------GARYGMPIDMWSLGCILAELLTGYPL 298 (429)
T ss_dssp EECCCTTCEETTC-----------CCCSSCSCGGGCCHHHHH------------TBCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred EEeecccceecCC-----------cccccCCCCCccChHHHh------------CCCCCchHHHHhHHHHHHHHHhCCCC
Confidence 9999999975411 122357899999997664 45689999999999999999999999
Q ss_pred CCcC
Q 001908 910 TNCM 913 (997)
Q Consensus 910 ~~~~ 913 (997)
|...
T Consensus 299 f~~~ 302 (429)
T 3kvw_A 299 LPGE 302 (429)
T ss_dssp SCCS
T ss_pred CCCC
Confidence 9743
No 258
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=6.3e-36 Score=343.95 Aligned_cols=210 Identities=21% Similarity=0.321 Sum_probs=155.8
Q ss_pred hcCcc-CCcccccCcceEEEEEEC--CCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSS-SNMIGQGSFGSVYKGILG--ENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~-~~~lg~G~~g~V~~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
+.|.+ .++||+|+||+||+|+++ .+++.||||++.... ....+.+|++++++++||||+++++++.. .....
T Consensus 20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~---~~~~~ 94 (405)
T 3rgf_A 20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLS---HADRK 94 (405)
T ss_dssp HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEE---TTTTE
T ss_pred hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEec---CCCCe
Confidence 45665 558999999999999976 468899999997432 23567899999999999999999999753 34568
Q ss_pred EEEEEeeccCCCHHHHhhcCCC---CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee----CCCCc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNG---QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL----DHDMV 828 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~---~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll----~~~~~ 828 (997)
.++||||++ |+|.+++..... ......+++..++.++.||+.||+|||++ +|+||||||+||++ +.++.
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~ 170 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGR 170 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTC
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCc
Confidence 999999995 588888764321 11122488999999999999999999999 99999999999999 77899
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+...... ..........||+.|+|||++.. ...++.++||||+||++|||++|+.
T Consensus 171 ~kl~Dfg~a~~~~~~~-----~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~DiwSlG~il~ell~g~~ 234 (405)
T 3rgf_A 171 VKIADMGFARLFNSPL-----KPLADLDPVVVTFWYRAPELLLG-----------ARHYTKAIDIWAIGCIFAELLTSEP 234 (405)
T ss_dssp EEECCTTCCC---------------------CCCTTCCHHHHTT-----------CCSCCHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEECCCceecCCCC-----cccccCCCceecCcccCchhhcC-----------CCcccchhhhHHHHHHHHHHHhCCC
Confidence 9999999998652211 11122334679999999977642 2458899999999999999999999
Q ss_pred CCCcC
Q 001908 909 PTNCM 913 (997)
Q Consensus 909 P~~~~ 913 (997)
||...
T Consensus 235 pf~~~ 239 (405)
T 3rgf_A 235 IFHCR 239 (405)
T ss_dssp TTCCC
T ss_pred CCCCc
Confidence 99754
No 259
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=1.2e-35 Score=324.85 Aligned_cols=253 Identities=23% Similarity=0.286 Sum_probs=199.5
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
...++|++.+.||+|+||+||+|+...+++.||+|++... .....+.+.+|++++++++||||+++++++. ..
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-----~~ 93 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILE-----DS 93 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEE-----CS
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEe-----CC
Confidence 3457899999999999999999999989999999998643 2334578899999999999999999999954 45
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC---CcEE
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD---MVAH 830 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~---~~~k 830 (997)
...++||||+++++|.+++.... .+++..++.++.|++.|++|||++ +|+||||||+||+++.+ +.+|
T Consensus 94 ~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~k 164 (287)
T 2wei_A 94 SSFYIVGELYTGGELFDEIIKRK------RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIK 164 (287)
T ss_dssp SEEEEEECCCCSCBHHHHHHHHS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CeEEEEEEccCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEE
Confidence 68999999999999999987654 478999999999999999999999 99999999999999764 4799
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+++..... .......||+.|+|||.+. +.++.++||||||+++|+|++|+.||
T Consensus 165 L~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~-------------~~~~~~~Di~slG~~l~~l~~g~~p~ 222 (287)
T 2wei_A 165 IIDFGLSTCFQQN---------TKMKDRIGTAYYIAPEVLR-------------GTYDEKCDVWSAGVILYILLSGTPPF 222 (287)
T ss_dssp ECSTTGGGTBCCC---------SSCSCHHHHHTTCCHHHHT-------------TCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred EeccCcceeecCC---------CccccccCcccccChHHhc-------------CCCCCchhhHhHHHHHHHHHhCCCCC
Confidence 9999999865221 1122345899999998764 34788999999999999999999998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... ..+......... .... .+....++.++.+++.+||..||++|||+.|+++
T Consensus 223 ~~~~-----~~~~~~~~~~~~----~~~~----------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 223 YGKN-----EYDILKRVETGK----YAFD----------LPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CCSS-----HHHHHHHHHHCC----CCCC----------SGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCC-----HHHHHHHHHcCC----CCCC----------chhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 7431 111111110000 0000 0001123456789999999999999999999987
No 260
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.9e-36 Score=328.51 Aligned_cols=271 Identities=24% Similarity=0.350 Sum_probs=197.9
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||+||+|+.+.+++.||||+++... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-----~~~~ 77 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-----ENKL 77 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE-----TTEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEec-----CCce
Confidence 57899999999999999999999899999999986432 2234678899999999999999999999643 4589
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
++||||++ ++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|||.
T Consensus 78 ~lv~e~~~-~~L~~~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~ 149 (299)
T 2r3i_A 78 YLVFEFLH-QDLKKFMDASAL----TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGL 149 (299)
T ss_dssp EEEEECCS-EEHHHHHHHTTT----TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTH
T ss_pred EEEEEccc-CCHHHHHHhhhc----cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchh
Confidence 99999996 699999987642 2478899999999999999999999 999999999999999999999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++...... .......||+.|+|||.+.. ...++.++|||||||++|||+||+.||......
T Consensus 150 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~ 210 (299)
T 2r3i_A 150 ARAFGVPV--------RTYTHEVVTLWYRAPEILLG-----------AKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEI 210 (299)
T ss_dssp HHHHCCCS--------BCTTSCBCCCTTCCHHHHTT-----------CSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred hhhccCCc--------cccCcccccccccCcHHhhc-----------cccCChHHHHHHHHHHHHHHHhCCCCCCCccHH
Confidence 98752211 11223468999999987642 123788999999999999999999999743211
Q ss_pred CccHHHHHHhh-cch-hhhh------hcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA-LPE-KVME------TVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~-~~~-~~~~------~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ......... .+. .... ..++.... +............+.++.+++.+|+..||++|||+.|+++
T Consensus 211 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 211 D-QLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPK-WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp H-HHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCC-CCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred H-HHHHHHHHhCCCchhhhhHhhcCcccchhhhc-ccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1 111111110 000 0000 00000000 0000000111123457789999999999999999999986
No 261
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=6.2e-36 Score=342.07 Aligned_cols=273 Identities=22% Similarity=0.283 Sum_probs=191.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~~~~ 757 (997)
.+|++.+.||+|+||+||+|++..+++ ||+|++..... ...+|+++++.++||||+++++++..... .+....+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 478999999999999999999985554 88887753322 12369999999999999999999755332 3344588
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-CCCcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-HDMVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~~~~~kl~DFg~ 836 (997)
+||||++++ +.+.+...... ...+++..++.++.||++||+|||++ +|+||||||+||+++ .++.+||+|||+
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~ 188 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKL--KQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGS 188 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEeeccCcc-HHHHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCC
Confidence 999999764 44443321100 11488999999999999999999999 999999999999999 899999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... .......||+.|+|||++.. ...++.++||||+||++|||++|+.||......
T Consensus 189 a~~~~~~---------~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~ 248 (394)
T 4e7w_A 189 AKILIAG---------EPNVSYICSRYYRAPELIFG-----------ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGI 248 (394)
T ss_dssp CEECCTT---------CCCCSSCSCGGGCCHHHHTT-----------CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred cccccCC---------CCCcccccCcCccCHHHHcC-----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9865221 12234578999999976642 235889999999999999999999999743211
Q ss_pred CccHHHHHHhh-cc-hhhhhhcCcccccc-cccchh----hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMA-LP-EKVMETVDPSLLLA-WSDGRR----RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~-~~-~~~~~~~d~~~~~~-~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.+..... .+ .......++..... +..... .......++++.+++.+||..||++|||+.|+++
T Consensus 249 -~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 249 -DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp -HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 1111111111 00 11111111111100 000000 0011124567889999999999999999999975
No 262
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.8e-35 Score=339.50 Aligned_cols=274 Identities=19% Similarity=0.254 Sum_probs=201.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC--------CCCcceEEeeeeccC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR--------HRNLIKIITVCSSID 749 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~l~~~~~~~~ 749 (997)
.++|++.++||+|+||+||+|++..+++.||||+++.. ....+.+.+|++++++++ |+||+++++++....
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 36799999999999999999999989999999999743 334567889999999985 788999999865321
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCC--
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDM-- 827 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~-- 827 (997)
......++||||+ ++++.+++..... ..+++..++.++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 -~~~~~~~lv~e~~-~~~l~~~~~~~~~----~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~ 186 (397)
T 1wak_A 115 -VNGTHICMVFEVL-GHHLLKWIIKSNY----QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQY 186 (397)
T ss_dssp -TTEEEEEEEECCC-CCBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHH
T ss_pred -CCCceEEEEEecc-CccHHHHHHhccc----CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchh
Confidence 2456899999999 6677777765432 24889999999999999999999964 799999999999999876
Q ss_pred -----------------------------------------------cEEEcccccchhcccCCCCCccccccccccccc
Q 001908 828 -----------------------------------------------VAHVSDFGLARFLFARPFDTSMETQSSSIGIKG 860 (997)
Q Consensus 828 -----------------------------------------------~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~g 860 (997)
.+||+|||.|+.... ......|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~-----------~~~~~~g 255 (397)
T 1wak_A 187 IRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHK-----------HFTEDIQ 255 (397)
T ss_dssp HHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTB-----------CSCSCCS
T ss_pred hhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccc-----------cCccCCC
Confidence 899999999976521 1223478
Q ss_pred cccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCCCcc--HHHH---HHhh--cchhhh
Q 001908 861 TVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQGGLT--LHEF---CKMA--LPEKVM 933 (997)
Q Consensus 861 t~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~~~~--~~~~---~~~~--~~~~~~ 933 (997)
|+.|+|||++. +..++.++|||||||++|||+||+.||......... .... .... .+....
T Consensus 256 t~~y~aPE~~~------------~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 323 (397)
T 1wak_A 256 TRQYRSLEVLI------------GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLI 323 (397)
T ss_dssp CGGGCCHHHHH------------TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHH
T ss_pred CCcccCChhhc------------CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHh
Confidence 99999997664 466899999999999999999999999854332211 1111 1100 011110
Q ss_pred h-------hcCccc-ccccccc----------hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 934 E-------TVDPSL-LLAWSDG----------RRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 934 ~-------~~d~~~-~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ...... ....... .....+.+....+.+++.+||+.||++|||+.|+++
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 324 VAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp HHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred hcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0 000000 0000000 000113456678999999999999999999999985
No 263
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.9e-36 Score=328.14 Aligned_cols=266 Identities=21% Similarity=0.296 Sum_probs=193.4
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-------
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID------- 749 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~------- 749 (997)
..++|++.+.||+|+||.||+|+...+++.||||++... ....+.+.+|++++++++||||+++++++....
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356899999999999999999999989999999999643 344578899999999999999999999875421
Q ss_pred -cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 750 -FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 750 -~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
.......++||||+++|+|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++.++.
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~ 154 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN-----LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRN 154 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC-----GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc-----cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCC
Confidence 123567899999999999999998653 1367889999999999999999999 9999999999999999999
Q ss_pred EEEcccccchhcccCCCCC------ccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHH
Q 001908 829 AHVSDFGLARFLFARPFDT------SMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLE 902 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~------~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~e 902 (997)
+||+|||.++......... ............||+.|+|||++.. .+.++.++||||+||++||
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~~ 223 (303)
T 1zy4_A 155 VKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----------TGHYNEKIDMYSLGIIFFE 223 (303)
T ss_dssp EEECCCCCCSCTTC-------------------------CTTSCHHHHTS-----------CSCCCTHHHHHHHHHHHHH
T ss_pred EEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC-----------CCCCcchhhHHHHHHHHHH
Confidence 9999999997653211000 0001122334578999999987642 2357899999999999999
Q ss_pred HHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 903 MFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 903 lltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
|++ ||.... ...+..... .. ........ ....++..+.+++.+||+.||++|||+.|++
T Consensus 224 l~~---p~~~~~----~~~~~~~~~-----~~-~~~~~~~~--------~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll 282 (303)
T 1zy4_A 224 MIY---PFSTGM----ERVNILKKL-----RS-VSIEFPPD--------FDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282 (303)
T ss_dssp HHS---CCSSHH----HHHHHHHHH-----HS-TTCCCCTT--------CCTTTSHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHh---ccCCch----hHHHHHHhc-----cc-cccccCcc--------ccccchHHHHHHHHHHHhcCcccCcCHHHHh
Confidence 998 544211 111111110 00 00000000 0112345678999999999999999999997
Q ss_pred H
Q 001908 983 A 983 (997)
Q Consensus 983 ~ 983 (997)
+
T Consensus 283 ~ 283 (303)
T 1zy4_A 283 N 283 (303)
T ss_dssp H
T ss_pred C
Confidence 6
No 264
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.6e-35 Score=323.36 Aligned_cols=257 Identities=22% Similarity=0.331 Sum_probs=198.3
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc----hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCC
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ----KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGA 753 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~ 753 (997)
.++|++.+.||+|+||.||+|.+..+++.||+|+++... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---~~~ 80 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN---EEK 80 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC---C--
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc---CCC
Confidence 468999999999999999999999899999999997432 2345788999999999999999999998642 335
Q ss_pred ceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcc
Q 001908 754 DFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSD 833 (997)
Q Consensus 754 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~D 833 (997)
...++||||++++ +.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||+|
T Consensus 81 ~~~~lv~e~~~~~-l~~~~~~~~~----~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~d 152 (305)
T 2wtk_C 81 QKMYMVMEYCVCG-MQEMLDSVPE----KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISA 152 (305)
T ss_dssp -CEEEEEECCSEE-HHHHHHHSTT----CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECC
T ss_pred CeEEEEehhccCC-HHHHHHhCcc----cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeec
Confidence 6789999999776 8888776542 2488999999999999999999999 999999999999999999999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||.+....... .........||+.|+|||++... ...++.++||||+||++|||++|+.||...
T Consensus 153 fg~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 216 (305)
T 2wtk_C 153 LGVAEALHPFA------ADDTCRTSQGSPAFQPPEIANGL----------DTFSGFKVDIWSAGVTLYNITTGLYPFEGD 216 (305)
T ss_dssp CTTCEECCTTC------SSCEECCCCSCGGGCCHHHHTCC----------SCEESHHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccCccc------cccccccCCCCCCCcChhhccCc----------ccCCcchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 99998653211 11122345689999999876521 123477999999999999999999998742
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
...+........ .... +..++..+.+++.+||..||++|||+.|+++.
T Consensus 217 -----~~~~~~~~i~~~------~~~~------------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 217 -----NIYKLFENIGKG------SYAI------------PGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -----SHHHHHHHHHHC------CCCC------------CSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -----hHHHHHHHHhcC------CCCC------------CCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 122221111000 0000 11234567899999999999999999999863
No 265
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-35 Score=334.56 Aligned_cols=284 Identities=20% Similarity=0.235 Sum_probs=191.6
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF- 750 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~- 750 (997)
.......++|++.+.||+|+||+||+|+++.+++.||||++.... .......+|++.++.++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 455667789999999999999999999999899999999986432 223456778888899999999999999865322
Q ss_pred -CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh--hCCCCCcEecCCCCCCeeeCC-C
Q 001908 751 -KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH--HHCQPPIVHGDLKPSNVLLDH-D 826 (997)
Q Consensus 751 -~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH--~~~~~~ivHrDlk~~NIll~~-~ 826 (997)
......++||||+++ ++.+.+..... ....+++..+..++.|++.|+.||| +. +|+||||||+||+++. +
T Consensus 95 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~ 168 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPD-TLHRCCRNYYR--RQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEAD 168 (360)
T ss_dssp CTTCEEEEEEEECCSC-BHHHHHHHHHT--TTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTT
T ss_pred cccceeEEEEeecccc-cHHHHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCC
Confidence 223347899999975 66555443111 1124788899999999999999999 77 9999999999999997 8
Q ss_pred CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhC
Q 001908 827 MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTR 906 (997)
Q Consensus 827 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg 906 (997)
+.+||+|||+|+..... .......||+.|+|||++.. ...++.++|||||||++|||++|
T Consensus 169 ~~~kl~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~ell~g 228 (360)
T 3e3p_A 169 GTLKLCDFGSAKKLSPS---------EPNVAYICSRYYRAPELIFG-----------NQHYTTAVDIWSVGCIFAEMMLG 228 (360)
T ss_dssp TEEEECCCTTCBCCCTT---------SCCCSTTSCGGGCCHHHHTT-----------CSSCCTHHHHHHHHHHHHHHHHS
T ss_pred CcEEEeeCCCceecCCC---------CCcccccCCcceeCHHHHcC-----------CCCCCcHHHHHHHHHHHHHHHhC
Confidence 99999999999865221 12234568999999976642 23478999999999999999999
Q ss_pred CCCCCcCcCCCccHHHHHHhh--cchhhhhhcCccccc-ccccchhhh-------hHHHHHHHHHHHHhhcCCCCCCCCC
Q 001908 907 RRPTNCMFQGGLTLHEFCKMA--LPEKVMETVDPSLLL-AWSDGRRRA-------KVEECLVTVIRIGVACSMESPIERM 976 (997)
Q Consensus 907 ~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~~~-~~~~~~~~~-------~~~~~~~~l~~li~~cl~~dP~~Rp 976 (997)
+.||...... ..+....... .+.......++.... ........+ ....+..++.+++.+||+.||++||
T Consensus 229 ~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 307 (360)
T 3e3p_A 229 EPIFRGDNSA-GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERM 307 (360)
T ss_dssp SCSSCCSSHH-HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSC
T ss_pred CCCcCCCChH-HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccC
Confidence 9999743211 1112221111 111111111111100 000000000 0112356788999999999999999
Q ss_pred CHHHHHH
Q 001908 977 EMRDVLA 983 (997)
Q Consensus 977 s~~evl~ 983 (997)
|+.|+++
T Consensus 308 t~~e~l~ 314 (360)
T 3e3p_A 308 KPYEALC 314 (360)
T ss_dssp CHHHHTT
T ss_pred CHHHHhc
Confidence 9999975
No 266
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.5e-36 Score=345.35 Aligned_cols=274 Identities=22% Similarity=0.297 Sum_probs=194.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCceEE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGADFKA 757 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~~~ 757 (997)
.+|+..+.||+|+||+||+|++..+++.||||++..... ...+|++++++++||||+++++++.... ..+..+.+
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 468899999999999999999998999999999864322 2346999999999999999999875432 12334577
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-CcEEEccccc
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD-MVAHVSDFGL 836 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~-~~~kl~DFg~ 836 (997)
+||||+++ ++.+.+..... ....+++..++.++.||++||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 130 lv~e~~~~-~l~~~~~~~~~--~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~ 203 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSR--AKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGS 203 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHH--TTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTT
T ss_pred eehhcccc-cHHHHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchh
Confidence 99999965 77766653211 012488999999999999999999999 99999999999999965 6789999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
|+..... .......||+.|+|||++.. ...++.++|||||||++|||++|+.||......
T Consensus 204 a~~~~~~---------~~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~ 263 (420)
T 1j1b_A 204 AKQLVRG---------EPNVSYICSRYYRAPELIFG-----------ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV 263 (420)
T ss_dssp CEECCTT---------CCCCSCCSCTTSCCHHHHTT-----------CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred hhhcccC---------CCceeeeeCCCcCCHHHHcC-----------CCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence 9865221 12234578999999976642 236889999999999999999999999743211
Q ss_pred CccHHHHHHhhc-c-hhhhhhcCccccc-ccccch----hhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 917 GLTLHEFCKMAL-P-EKVMETVDPSLLL-AWSDGR----RRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 917 ~~~~~~~~~~~~-~-~~~~~~~d~~~~~-~~~~~~----~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..+.+...... + .......++.... .+.... ........+.++.+++.+||..||++|||+.|+++
T Consensus 264 -~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 264 -DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp -HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 11122211110 0 0111111111100 000000 00001123467889999999999999999999975
No 267
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=5.3e-36 Score=363.16 Aligned_cols=262 Identities=21% Similarity=0.321 Sum_probs=204.1
Q ss_pred HHhhcCccCCcccccCcceEEEEEECC---CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcC
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGE---NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFK 751 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~ 751 (997)
...++|++.+.||+|+||+||+|++.. .+..||+|+++.. .....+.+.+|+.++++++||||+++++++.
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~----- 461 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT----- 461 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-----
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-----
Confidence 345789999999999999999999864 3467999998743 3444578899999999999999999999863
Q ss_pred CCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEE
Q 001908 752 GADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHV 831 (997)
Q Consensus 752 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl 831 (997)
.+..++||||+++|+|.+++.... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+||
T Consensus 462 -~~~~~lv~E~~~~g~L~~~l~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL 532 (656)
T 2j0j_A 462 -ENPVWIIMELCTLGELRSFLQVRK-----FSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKL 532 (656)
T ss_dssp -SSSCEEEEECCTTCBHHHHHHHTT-----TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEE
T ss_pred -cCceEEEEEcCCCCcHHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEE
Confidence 235899999999999999998653 1478999999999999999999999 9999999999999999999999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+|+...... ........+|+.|+|||++. +..++.++|||||||++|||++ |..||
T Consensus 533 ~DFG~a~~~~~~~-------~~~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwSlG~il~ellt~g~~Pf 593 (656)
T 2j0j_A 533 GDFGLSRYMEDST-------YYKASKGKLPIKWMAPESIN------------FRRFTSASDVWMFGVCMWEILMHGVKPF 593 (656)
T ss_dssp CCCCCCCSCCC-----------------CCGGGCCHHHHH------------HCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred EecCCCeecCCCc-------ceeccCCCCCcceeCHHHhc------------CCCCCchhhHHHHHHHHHHHHHcCCCCC
Confidence 9999998652211 11122345788999997764 4568899999999999999997 99998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQ 990 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~ 990 (997)
.... ..+..... .....+ +.+..++..+.+++.+||..||++|||+.|+++.|+++.+
T Consensus 594 ~~~~-----~~~~~~~i-----~~~~~~------------~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~ 651 (656)
T 2j0j_A 594 QGVK-----NNDVIGRI-----ENGERL------------PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651 (656)
T ss_dssp TTCC-----HHHHHHHH-----HHTCCC------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCC-----HHHHHHHH-----HcCCCC------------CCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 7431 11111111 000000 0112345678899999999999999999999999999876
Q ss_pred Hh
Q 001908 991 TL 992 (997)
Q Consensus 991 ~~ 992 (997)
+.
T Consensus 652 ~~ 653 (656)
T 2j0j_A 652 EE 653 (656)
T ss_dssp HH
T ss_pred Hh
Confidence 53
No 268
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.8e-35 Score=330.01 Aligned_cols=277 Identities=25% Similarity=0.366 Sum_probs=200.8
Q ss_pred HhhcCccCCcccccCcceEEEEEEC-CCCcEEEEEEecccc--hhhHHHHHHHHHHHhhc---CCCCcceEEeeeeccCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILG-ENGTFVAVKILNLMQ--KGALKSFVAECEVLRNT---RHRNLIKIITVCSSIDF 750 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~h~niv~l~~~~~~~~~ 750 (997)
+.++|++.+.||+|+||.||+|++. .+++.||+|+++... ......+.+|+++++.+ +||||+++++++.....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 4578999999999999999999995 678999999986432 22234566788877766 89999999999764333
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
......++||||++ |+|.+++...... .+++..++.++.|++.||+|||++ +|+||||||+||+++.++.+|
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~k 160 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPEP----GVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIK 160 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCTT----CSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEE
T ss_pred CCCceEEEEEecCC-CCHHHHHHhcccC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEE
Confidence 35668999999997 6999999876422 378999999999999999999999 999999999999999999999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||.++.... ........||+.|+|||++. +..++.++|||||||++|||++|+.||
T Consensus 161 l~Dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf 219 (326)
T 1blx_A 161 LADFGLARIYSF---------QMALTSVVVTLWYRAPEVLL------------QSSYATPVDLWSVGCIFAEMFRRKPLF 219 (326)
T ss_dssp ECSCCSCCCCCG---------GGGGCCCCCCCTTCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred EecCcccccccC---------CCCccccccccceeCHHHHh------------cCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 999999975421 11233457899999997654 466889999999999999999999999
Q ss_pred CcCcCCCccHHHHHHhh-cc--hhhhhhcC-cccccc-cccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMA-LP--EKVMETVD-PSLLLA-WSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~-~~--~~~~~~~d-~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
...... ..+....... .+ ..+..... +..... ............++..+.+++.+||..||++|||+.|+++
T Consensus 220 ~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 220 RGSSDV-DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp CCSSHH-HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCHH-HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 743211 1111111110 00 00000000 000000 0000000111234567789999999999999999999984
No 269
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.8e-35 Score=352.37 Aligned_cols=312 Identities=20% Similarity=0.164 Sum_probs=253.6
Q ss_pred CCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCee
Q 001908 217 MSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSL 296 (997)
Q Consensus 217 l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 296 (997)
+++++.|++++|.++ .+|..++..+++|++|+|++|.+++..|..|+++++|++|+|++|.+++.+|..|+++++|++|
T Consensus 50 l~~l~~l~l~~~~l~-~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 50 LNNQKIVTFKNSTMR-KLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GCCCSEEEESSCEES-EECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCCCC-CcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 456677777777776 6777777778888888888888887777788888888888888888888777777766666666
Q ss_pred EccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEe
Q 001908 297 DLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLG 376 (997)
Q Consensus 297 ~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~ 376 (997)
+|++|.|+.+ .+..|+++++|++|+
T Consensus 129 ~L~~n~l~~l-------------------------------------------------------~~~~~~~l~~L~~L~ 153 (597)
T 3oja_B 129 VLERNDLSSL-------------------------------------------------------PRGIFHNTPKLTTLS 153 (597)
T ss_dssp ECCSSCCCCC-------------------------------------------------------CTTTTTTCTTCCEEE
T ss_pred EeeCCCCCCC-------------------------------------------------------CHHHhccCCCCCEEE
Confidence 6666655432 223356667777777
Q ss_pred ccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC
Q 001908 377 IEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 377 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 456 (997)
|++|.+++..|..|+++++|++|+|++|.+++.. ++.+++|+.|++++|.+++. ...++|+.|++++|.+.
T Consensus 154 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l-----~~~~~L~~L~ls~n~l~- 224 (597)
T 3oja_B 154 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL-----AIPIAVEELDASHNSIN- 224 (597)
T ss_dssp CCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCSEE-----ECCTTCSEEECCSSCCC-
T ss_pred eeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccccc-----cCCchhheeeccCCccc-
Confidence 7777777777777888888888888888887542 55678889999999988752 34568999999999997
Q ss_pred CcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhcc
Q 001908 457 AVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLR 536 (997)
Q Consensus 457 ~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 536 (997)
.+|..+. .++ +.|+|++|.+++ +..+..+++|+.|+|++|.+++.+|..|.++++|+.|+|++|++++ +|..+.
T Consensus 225 ~~~~~~~--~~L-~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~ 298 (597)
T 3oja_B 225 VVRGPVN--VEL-TILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQ 298 (597)
T ss_dssp EEECSCC--SCC-CEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSS
T ss_pred ccccccC--CCC-CEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccc
Confidence 4444332 455 899999999996 4779999999999999999999999999999999999999999995 677888
Q ss_pred ccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 537 SLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
.+++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++.. ...++++..+++.+|||.|.+
T Consensus 299 ~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 299 PIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp CCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred cCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 8999999999999999 68888999999999999999999764 345789999999999999964
No 270
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.6e-35 Score=333.70 Aligned_cols=266 Identities=21% Similarity=0.342 Sum_probs=197.6
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhh-----------------HHHHHHHHHHHhhcCCCCcce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGA-----------------LKSFVAECEVLRNTRHRNLIK 740 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~h~niv~ 740 (997)
.++|++.+.||+|+||.||+|++ +++.||||++....... .+.+.+|++++++++||||++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 35899999999999999999999 89999999996332111 178899999999999999999
Q ss_pred EEeeeeccCcCCCceEEEEEeeccCCCHHHH------hhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEe
Q 001908 741 IITVCSSIDFKGADFKALVYEYMQNGSLEEW------LHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVH 813 (997)
Q Consensus 741 l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivH 813 (997)
+++++. ..+..++||||+++|+|.++ +.... ...+++..++.++.|++.|++|||+ . +|+|
T Consensus 108 ~~~~~~-----~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H 175 (348)
T 2pml_X 108 CEGIIT-----NYDEVYIIYEYMENDSILKFDEYFFVLDKNY----TCFIPIQVIKCIIKSVLNSFSYIHNEK---NICH 175 (348)
T ss_dssp CSEEEE-----SSSEEEEEEECCTTCBSSEESSSEESSCSSS----CCCCCHHHHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred EEEEEe-----eCCeEEEEEeccCCCcHHHHHHHhhhhhhcc----ccCCCHHHHHHHHHHHHHHHHHHhccC---CEee
Confidence 999964 35689999999999999998 54421 2358999999999999999999999 8 9999
Q ss_pred cCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCC-CCCc-cc
Q 001908 814 GDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGS-EASV-TG 891 (997)
Q Consensus 814 rDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~-~~~~-~~ 891 (997)
|||||+||+++.++.+||+|||.+...... ......||+.|+|||++. +. .++. ++
T Consensus 176 ~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~------------~~~~~~~~~~ 233 (348)
T 2pml_X 176 RDVKPSNILMDKNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFS------------NESSYNGAKV 233 (348)
T ss_dssp CCCCGGGEEECTTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGS------------SCCCEEHHHH
T ss_pred cCCChHhEEEcCCCcEEEeccccccccccc----------cccCCCCCcCccCchhhc------------CCCCCCcchh
Confidence 999999999999999999999999765221 233457899999997664 23 4555 99
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcC-cccccccccchhhhhHHHHHHHHHHHHhhcCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVD-PSLLLAWSDGRRRAKVEECLVTVIRIGVACSME 970 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 970 (997)
|||||||++|||++|+.||...... .+..............+ ..................++.++.+++.+||..
T Consensus 234 Di~slG~il~~l~~g~~pf~~~~~~----~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~ 309 (348)
T 2pml_X 234 DIWSLGICLYVMFYNVVPFSLKISL----VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRK 309 (348)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSCS----HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCS
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCcH----HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccC
Confidence 9999999999999999999754221 11111111110000000 000000000000111123456788999999999
Q ss_pred CCCCCCCHHHHHH
Q 001908 971 SPIERMEMRDVLA 983 (997)
Q Consensus 971 dP~~Rps~~evl~ 983 (997)
||++|||+.|+++
T Consensus 310 dP~~Rps~~e~l~ 322 (348)
T 2pml_X 310 NPAERITSEDALK 322 (348)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhhCCCHHHHhc
Confidence 9999999999975
No 271
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=7.5e-35 Score=330.73 Aligned_cols=271 Identities=22% Similarity=0.243 Sum_probs=196.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 754 (997)
.++|.+.+.||+|+||+||+|++..+++.||||++... .....+.+.+|+++++.++||||+++++++...+. ....
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 46789999999999999999999999999999999743 33445788999999999999999999999754321 1112
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||++ ++|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 121 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Df 188 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMGM--------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 188 (371)
T ss_dssp CCEEEEECCC-EEHHHHTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECST
T ss_pred eEEEEEcccc-ccHHHHhhc--------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEec
Confidence 3499999996 689888743 378999999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+|+.... ......||+.|+|||++.. ...++.++||||+||++|||++|+.||....
T Consensus 189 g~a~~~~~-----------~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~ 246 (371)
T 4exu_A 189 GLARHADA-----------EMTGYVVTRWYRAPEVILS-----------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 246 (371)
T ss_dssp TCC-------------------CTTCCCTTSCHHHHSC-----------CSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred Cccccccc-----------CcCCcccCccccCHHHhcC-----------CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99975421 1234578999999976642 2568899999999999999999999997432
Q ss_pred CCCccHHHHHHhh--cchhhhhhcCccccc----cc---ccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA--LPEKVMETVDPSLLL----AW---SDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~~~~~~~~d~~~~~----~~---~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+....... .+............. .. ...........+..++.+++.+||..||++|||+.|+++
T Consensus 247 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 247 YL-DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HH-HHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hH-HHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 11 0111111100 011111111100000 00 000000111223567889999999999999999999975
No 272
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.7e-36 Score=334.42 Aligned_cols=277 Identities=21% Similarity=0.273 Sum_probs=200.6
Q ss_pred HHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC
Q 001908 672 SELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID 749 (997)
Q Consensus 672 ~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~ 749 (997)
.+.....++|++.+.||+|+||+||+|+++. .||+|+++.. .....+.+.+|++++++++||||+++++++.
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~--- 99 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACM--- 99 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEE---
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEe---
Confidence 3334445789999999999999999999853 3999998643 2233456778999999999999999999964
Q ss_pred cCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcE
Q 001908 750 FKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVA 829 (997)
Q Consensus 750 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~ 829 (997)
..+..++||||+++++|.+++.... ..+++..++.++.|++.|++|||++ +|+||||||+||+++ ++.+
T Consensus 100 --~~~~~~iv~e~~~~~~L~~~l~~~~-----~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~ 168 (319)
T 2y4i_B 100 --SPPHLAIITSLCKGRTLYSVVRDAK-----IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKV 168 (319)
T ss_dssp --CSSCEEEECBCCCSEEHHHHTTSSC-----CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CC
T ss_pred --cCCceEEEeecccCCcHHHHHHhcC-----CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCE
Confidence 3457999999999999999998653 2478889999999999999999999 999999999999998 7899
Q ss_pred EEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 830 HVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 830 kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
||+|||+++....... ...........||+.|+|||++...... .......++.++|||||||++|||++|+.|
T Consensus 169 ~l~Dfg~~~~~~~~~~---~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~~~~~~~~~~Di~slG~il~el~~g~~p 242 (319)
T 2y4i_B 169 VITDFGLFSISGVLQA---GRREDKLRIQNGWLCHLAPEIIRQLSPD---TEEDKLPFSKHSDVFALGTIWYELHAREWP 242 (319)
T ss_dssp EECCCSCCC-------------CCSCBCCSGGGGTSCHHHHSCBSCC-----CCCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred EEeecCCccccccccc---cccccccccCCCcccccChHHhhhcccc---ccccccCCCchhhHHHHHHHHHHHHhCCCC
Confidence 9999999876422111 1112223345689999999988642110 111234578999999999999999999999
Q ss_pred CCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHH
Q 001908 910 TNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAAR 989 (997)
Q Consensus 910 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~ 989 (997)
|.... ..+..... .....+.... ..++.++.+++.+||..||++|||+.++++.|+++.
T Consensus 243 ~~~~~-----~~~~~~~~-----~~~~~~~~~~-----------~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~ 301 (319)
T 2y4i_B 243 FKTQP-----AEAIIWQM-----GTGMKPNLSQ-----------IGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLP 301 (319)
T ss_dssp SSSCC-----HHHHHHHH-----HTTCCCCCCC-----------SSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC-
T ss_pred CCCCC-----HHHHHHHh-----ccCCCCCCCc-----------CCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 87431 12211111 1111111110 012345779999999999999999999999999877
Q ss_pred HHh
Q 001908 990 QTL 992 (997)
Q Consensus 990 ~~~ 992 (997)
...
T Consensus 302 ~~~ 304 (319)
T 2y4i_B 302 KRN 304 (319)
T ss_dssp ---
T ss_pred Hhh
Confidence 543
No 273
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5.3e-35 Score=333.48 Aligned_cols=202 Identities=26% Similarity=0.330 Sum_probs=167.1
Q ss_pred HhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CC-----CcceEEeeeeccCc
Q 001908 677 ATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HR-----NLIKIITVCSSIDF 750 (997)
Q Consensus 677 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~l~~~~~~~~~ 750 (997)
..++|++.+.||+|+||+||+|++..+++.||||+++.. ......+.+|+++++.++ |+ +|+++++++.
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---- 126 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFM---- 126 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEE----
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeec----
Confidence 457899999999999999999999999999999999743 233466788999988885 55 4899998854
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC--CCCc
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD--HDMV 828 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~--~~~~ 828 (997)
..+..++||||++ |+|.+++..... ..+++..++.++.|++.||.|||+. ..+|+||||||+||+++ .++.
T Consensus 127 -~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~ 199 (382)
T 2vx3_A 127 -FRNHLCLVFEMLS-YNLYDLLRNTNF----RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSA 199 (382)
T ss_dssp -ETTEEEEEEECCC-CBHHHHHHHTTT----SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCC
T ss_pred -cCCceEEEEecCC-CCHHHHHhhcCc----CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCc
Confidence 3468999999995 599999987642 2488999999999999999999952 12899999999999995 4788
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+|+.... ......||+.|+|||++. +..++.++|||||||++|||+||+.
T Consensus 200 ~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~------------~~~~~~~~DiwSlG~il~elltg~~ 256 (382)
T 2vx3_A 200 IKIVDFGSSCQLGQ-----------RIYQYIQSRFYRSPEVLL------------GMPYDLAIDMWSLGCILVEMHTGEP 256 (382)
T ss_dssp EEECCCTTCEETTC-----------CCCSSCSCGGGCCHHHHT------------TCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeccCceeccc-----------ccccccCCccccChHHHc------------CCCCCcHHHHHHHHHHHHHHHhCCC
Confidence 99999999976521 122357899999997654 5678999999999999999999999
Q ss_pred CCCcC
Q 001908 909 PTNCM 913 (997)
Q Consensus 909 P~~~~ 913 (997)
||...
T Consensus 257 pf~~~ 261 (382)
T 2vx3_A 257 LFSGA 261 (382)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 99743
No 274
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.2e-35 Score=327.08 Aligned_cols=249 Identities=21% Similarity=0.309 Sum_probs=189.0
Q ss_pred hHHHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------hhHHHHHHHHHHHhhc----CCCCcce
Q 001908 671 YSELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------GALKSFVAECEVLRNT----RHRNLIK 740 (997)
Q Consensus 671 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l----~h~niv~ 740 (997)
..+.....++|++.+.||+|+||.||+|++..+++.||||+++.... .....+.+|+++++++ +|+||++
T Consensus 23 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~ 102 (312)
T 2iwi_A 23 GKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIR 102 (312)
T ss_dssp ----------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCC
T ss_pred ccchhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeee
Confidence 34455667899999999999999999999998999999999964322 1223456799999998 8999999
Q ss_pred EEeeeeccCcCCCceEEEEEee-ccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCC
Q 001908 741 IITVCSSIDFKGADFKALVYEY-MQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPS 819 (997)
Q Consensus 741 l~~~~~~~~~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~ 819 (997)
+++++ ...+..++|||| +++++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+
T Consensus 103 ~~~~~-----~~~~~~~~v~e~~~~~~~L~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~ 168 (312)
T 2iwi_A 103 LLDWF-----ETQEGFMLVLERPLPAQDLFDYITEKG------PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDE 168 (312)
T ss_dssp EEEEC----------CEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGG
T ss_pred EEEEE-----ecCCeEEEEEEecCCCCCHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChh
Confidence 99984 445678999999 78999999998754 488999999999999999999999 9999999999
Q ss_pred CeeeC-CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHH
Q 001908 820 NVLLD-HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGV 898 (997)
Q Consensus 820 NIll~-~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGv 898 (997)
||+++ .++.+||+|||+++..... ......||..|+|||.+.. ....+.++||||+||
T Consensus 169 Nil~~~~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~-----------~~~~~~~~Di~slG~ 227 (312)
T 2iwi_A 169 NILIDLRRGCAKLIDFGSGALLHDE----------PYTDFDGTRVYSPPEWISR-----------HQYHALPATVWSLGI 227 (312)
T ss_dssp GEEEETTTTEEEECCCSSCEECCSS----------CBCCCCSCTTTSCHHHHHH-----------SCBCHHHHHHHHHHH
T ss_pred hEEEeCCCCeEEEEEcchhhhcccC----------cccccCCcccccCceeeec-----------CCCCCccchHHHHHH
Confidence 99999 8999999999999865221 1233568999999987753 122345899999999
Q ss_pred HHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCH
Q 001908 899 MLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEM 978 (997)
Q Consensus 899 vl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~ 978 (997)
++|||++|+.||... .+..... ... +..+..++.+++.+||+.||++|||+
T Consensus 228 il~~l~~g~~pf~~~-------~~~~~~~----------~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~ 278 (312)
T 2iwi_A 228 LLYDMVCGDIPFERD-------QEILEAE----------LHF------------PAHVSPDCCALIRRCLAPKPSSRPSL 278 (312)
T ss_dssp HHHHHHHSSCSCCSH-------HHHHHTC----------CCC------------CTTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHHHHHHCCCCCCCh-------HHHhhhc----------cCC------------cccCCHHHHHHHHHHccCChhhCcCH
Confidence 999999999998632 1111000 000 01124567899999999999999999
Q ss_pred HHHHH
Q 001908 979 RDVLA 983 (997)
Q Consensus 979 ~evl~ 983 (997)
.|+++
T Consensus 279 ~e~l~ 283 (312)
T 2iwi_A 279 EEILL 283 (312)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99986
No 275
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=4.6e-35 Score=327.72 Aligned_cols=257 Identities=21% Similarity=0.294 Sum_probs=174.4
Q ss_pred HhhcCccCC-cccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCc
Q 001908 677 ATNEFSSSN-MIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 677 ~~~~~~~~~-~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~ 754 (997)
..++|.+.+ .||+|+||+||+|+++.+++.||||++.... ...+|+. .++.++||||+++++++... ..+..
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~ 99 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGPHIVCILDVYENM-HHGKR 99 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH-----HHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH-----HHHHHHHHHHHhcCCCChHHHHHHHhhc-cCCCc
Confidence 346788855 6999999999999999999999999986432 1223333 35667999999999997542 12345
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEE
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHV 831 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl 831 (997)
..++||||+++|+|.+++..... ..+++.+++.++.|++.||+|||++ +|+||||||+||+++. ++.+||
T Consensus 100 ~~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl 172 (336)
T 3fhr_A 100 CLLIIMECMEGGELFSRIQERGD----QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKL 172 (336)
T ss_dssp EEEEEEECCTTEEHHHHHHTC-C----CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEE
T ss_pred eEEEEEeccCCCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEE
Confidence 68999999999999999987642 2489999999999999999999999 9999999999999986 456999
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTN 911 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~ 911 (997)
+|||+++.... .......||+.|+|||++. +..++.++|||||||++|||++|+.||.
T Consensus 173 ~Dfg~~~~~~~----------~~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il~~l~~g~~pf~ 230 (336)
T 3fhr_A 173 TDFGFAKETTQ----------NALQTPCYTPYYVAPEVLG------------PEKYDKSCDMWSLGVIMYILLCGFPPFY 230 (336)
T ss_dssp CCCTTCEEC--------------------------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-
T ss_pred eccccceeccc----------cccccCCCCcCccChhhhC------------CCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence 99999975421 1223456899999996653 4668889999999999999999999997
Q ss_pred cCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 912 CMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 912 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
........ ... ............. +....++.++.+++.+||..||++|||+.|+++
T Consensus 231 ~~~~~~~~-~~~-~~~~~~~~~~~~~-------------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 231 SNTGQAIS-PGM-KRRIRLGQYGFPN-------------PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp ----------------------CCCT-------------TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred Cccchhhh-hhH-HHhhhccccccCc-------------hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 44221100 000 0000000000000 001123456789999999999999999999987
No 276
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.8e-34 Score=320.70 Aligned_cols=318 Identities=21% Similarity=0.290 Sum_probs=225.9
Q ss_pred ccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCC
Q 001908 201 VGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFT 280 (997)
Q Consensus 201 l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 280 (997)
+..+.+.+. ..+..+++|++|++++|.++ .+|. +..+++|++|++++|++++..+ +..+++|++|+|++|+++
T Consensus 29 ~~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~~--~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~ 101 (347)
T 4fmz_A 29 LQKASVTDV--VTQEELESITKLVVAGEKVA-SIQG--IEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKIT 101 (347)
T ss_dssp HTCSCTTSE--ECHHHHTTCSEEECCSSCCC-CCTT--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred ccccccCCc--ccchhcccccEEEEeCCccc-cchh--hhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCccc
Confidence 344444432 23456778888888888887 5654 3467788888888887775433 777778888888888777
Q ss_pred CcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCccccc
Q 001908 281 GKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISG 360 (997)
Q Consensus 281 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~ 360 (997)
+. ..|..+++|++|++++|+++.++ .+..+++|++|++++|.....+
T Consensus 102 ~~--~~~~~l~~L~~L~l~~n~i~~~~--------~~~~l~~L~~L~l~~n~~~~~~----------------------- 148 (347)
T 4fmz_A 102 DI--SALQNLTNLRELYLNEDNISDIS--------PLANLTKMYSLNLGANHNLSDL----------------------- 148 (347)
T ss_dssp CC--GGGTTCTTCSEEECTTSCCCCCG--------GGTTCTTCCEEECTTCTTCCCC-----------------------
T ss_pred Cc--hHHcCCCcCCEEECcCCcccCch--------hhccCCceeEEECCCCCCcccc-----------------------
Confidence 64 24777777777777777776532 1556666777776666443222
Q ss_pred ccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCC
Q 001908 361 TIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGN 440 (997)
Q Consensus 361 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 440 (997)
..+..+++|++|++++|.+++..+ +..+++|++|++++|.+++. +. +..+++|+.|++++|.+++..+ +..
T Consensus 149 ---~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~ 219 (347)
T 4fmz_A 149 ---SPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITDITP--VAN 219 (347)
T ss_dssp ---GGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCCCGG--GGG
T ss_pred ---cchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCCCch--hhc
Confidence 225666777777777777775443 66777777777777777743 33 6777777777777777775433 677
Q ss_pred CCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEE
Q 001908 441 CKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIF 520 (997)
Q Consensus 441 l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 520 (997)
+++|++|++++|++++. |. +..++++ +.|++++|.+++. ..+..+++|+.|++++|++++. ..+..+++|+.|
T Consensus 220 ~~~L~~L~l~~n~l~~~-~~-~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L 292 (347)
T 4fmz_A 220 MTRLNSLKIGNNKITDL-SP-LANLSQL-TWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSL 292 (347)
T ss_dssp CTTCCEEECCSSCCCCC-GG-GTTCTTC-CEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEE
T ss_pred CCcCCEEEccCCccCCC-cc-hhcCCCC-CEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEE
Confidence 77777777777777643 33 6666666 7777777777743 3577888888999999988853 357888899999
Q ss_pred EccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCc
Q 001908 521 HMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 521 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 576 (997)
++++|++++..|..+..+++|+.|+|++|++++..| +..+++|++|++++|+++
T Consensus 293 ~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 293 FLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp ECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred ECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999988888888889999999999999887666 788889999999999875
No 277
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=5.5e-35 Score=327.72 Aligned_cols=268 Identities=20% Similarity=0.307 Sum_probs=198.6
Q ss_pred hhcCccCCcccccCcceEEEEEE-CCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC------cceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGIL-GENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN------LIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++.. ....+.+.+|+++++.++|++ ++++++++.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~---- 87 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE---- 87 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE----
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc----
Confidence 35899999999999999999998 567899999999743 334567889999999887654 899999854
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-----
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH----- 825 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~----- 825 (997)
..+..++||||+ +++|.+++..... ..+++..++.++.|++.||+|||++ +|+||||||+||+++.
T Consensus 88 -~~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~ 158 (339)
T 1z57_A 88 -HHGHICIVFELL-GLSTYDFIKENGF----LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTE 158 (339)
T ss_dssp -ETTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEE
T ss_pred -cCCcEEEEEcCC-CCCHHHHHHhcCC----CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEecccccc
Confidence 455899999999 8899999987642 2478999999999999999999999 9999999999999987
Q ss_pred --------------CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 826 --------------DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 826 --------------~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
++.+||+|||.|+.... ......||+.|+|||++. +..++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~ 215 (339)
T 1z57_A 159 AYNPKIKRDERTLINPDIKVVDFGSATYDDE-----------HHSTLVSTRHYRAPEVIL------------ALGWSQPC 215 (339)
T ss_dssp EEC----CEEEEESCCCEEECCCSSCEETTS-----------CCCSSCSCGGGCCHHHHT------------TSCCCTHH
T ss_pred ccCCccccccccccCCCceEeeCcccccCcc-----------ccccccCCccccChHHhh------------CCCCCcch
Confidence 67899999999975311 122357899999997654 46789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHh--hcchhhhhhcCcccc-----cccccch---------------h
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM--ALPEKVMETVDPSLL-----LAWSDGR---------------R 949 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~-----~~~~~~~---------------~ 949 (997)
|||||||++|||++|+.||....... ........ ..+............ ..+.... .
T Consensus 216 Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (339)
T 1z57_A 216 DVWSIGCILIEYYLGFTVFPTHDSKE-HLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294 (339)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSCHHH-HHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGG
T ss_pred hhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhh
Confidence 99999999999999999997432111 11111110 111111111100000 0000000 0
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 950 RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
......++.++.+++.+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 328 (339)
T 1z57_A 295 MLSQDVEHERLFDLIQKMLEYDPAKRITLREALK 328 (339)
T ss_dssp CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred cccchhhHHHHHHHHHHHhCcCcccccCHHHHhc
Confidence 0112245678899999999999999999999975
No 278
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.3e-35 Score=326.74 Aligned_cols=244 Identities=20% Similarity=0.281 Sum_probs=195.1
Q ss_pred HHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------hhHHHHHHHHHHHhhcC--CCCcceEEeeeec
Q 001908 676 EATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------GALKSFVAECEVLRNTR--HRNLIKIITVCSS 747 (997)
Q Consensus 676 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~ 747 (997)
...++|++.+.||+|+||.||+|++..+++.||||+++.... ...+.+.+|++++++++ |+||+++++++.
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~- 118 (320)
T 3a99_A 40 PLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE- 118 (320)
T ss_dssp CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE-
T ss_pred CccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe-
Confidence 345689999999999999999999998999999999964321 12245678999999996 599999999954
Q ss_pred cCcCCCceEEEEEeeccC-CCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC-C
Q 001908 748 IDFKGADFKALVYEYMQN-GSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-H 825 (997)
Q Consensus 748 ~~~~~~~~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-~ 825 (997)
..+..++|||++.+ ++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++ +
T Consensus 119 ----~~~~~~lv~e~~~~~~~L~~~l~~~~------~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~ 185 (320)
T 3a99_A 119 ----RPDSFVLILERPEPVQDLFDFITERG------ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLN 185 (320)
T ss_dssp ----CSSEEEEEEECCSSEEEHHHHHHHHC------SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETT
T ss_pred ----cCCcEEEEEEcCCCCccHHHHHhccC------CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCC
Confidence 45689999999976 89999998754 478899999999999999999999 999999999999999 7
Q ss_pred CCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh
Q 001908 826 DMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT 905 (997)
Q Consensus 826 ~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt 905 (997)
++.+||+|||+++..... ......||+.|+|||++.. ...++.++|||||||++|||++
T Consensus 186 ~~~~kL~Dfg~~~~~~~~----------~~~~~~gt~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~el~~ 244 (320)
T 3a99_A 186 RGELKLIDFGSGALLKDT----------VYTDFDGTRVYSPPEWIRY-----------HRYHGRSAAVWSLGILLYDMVC 244 (320)
T ss_dssp TTEEEECCCTTCEECCSS----------CBCCCCSCGGGSCHHHHHH-----------SCBCHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEeeCccccccccc----------cccCCCCCccCCChHHhcc-----------CCCCCccchHHhHHHHHHHHHH
Confidence 899999999999865221 1223568999999987753 1234678999999999999999
Q ss_pred CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 906 RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 906 g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
|+.||... .+..... ... . ..++.++.+++.+||..||++|||+.|+++
T Consensus 245 g~~pf~~~-------~~~~~~~----------~~~----~--------~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 245 GDIPFEHD-------EEIIRGQ----------VFF----R--------QRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp SSCSCCSH-------HHHHHCC----------CCC----S--------SCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCCCh-------hhhhccc----------ccc----c--------ccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 99998632 1110000 000 0 012456789999999999999999999976
No 279
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1.7e-35 Score=328.11 Aligned_cols=268 Identities=25% Similarity=0.373 Sum_probs=195.1
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcC--CCCcceEEeeeecc
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTR--HRNLIKIITVCSSI 748 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~ 748 (997)
.+....++|++.+.||+|+||.||+|++. +++.||||++... .....+.+.+|++++++++ |+||+++++++.
T Consensus 22 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~-- 98 (313)
T 3cek_A 22 SMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI-- 98 (313)
T ss_dssp EEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEE--
T ss_pred eeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEee--
Confidence 33445678999999999999999999986 6889999999643 3445678899999999996 599999999954
Q ss_pred CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc
Q 001908 749 DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV 828 (997)
Q Consensus 749 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~ 828 (997)
..+..++||| +.+++|.+++.... .+++..++.++.|++.||+|||++ +|+||||||+||+++ ++.
T Consensus 99 ---~~~~~~lv~e-~~~~~L~~~l~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~-~~~ 164 (313)
T 3cek_A 99 ---TDQYIYMVME-CGNIDLNSWLKKKK------SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGM 164 (313)
T ss_dssp ---CSSEEEEEEC-CCSEEHHHHHHHCS------SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTE
T ss_pred ---cCCEEEEEEe-cCCCcHHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEE-CCe
Confidence 3558999999 55889999998754 478899999999999999999999 999999999999996 489
Q ss_pred EEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCC
Q 001908 829 AHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRR 908 (997)
Q Consensus 829 ~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~ 908 (997)
+||+|||+++...... .........||+.|+|||.+........ +......++.++|||||||++|||++|+.
T Consensus 165 ~kL~Dfg~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~~~~~~~~~~~~Di~slG~il~el~~g~~ 237 (313)
T 3cek_A 165 LKLIDFGIANQMQPDT------TSVVKDSQVGTVNYMPPEAIKDMSSSRE-NGKSKSKISPKSDVWSLGCILYYMTYGKT 237 (313)
T ss_dssp EEECCCSSSCC--------------------CCGGGCCHHHHTTCC-----------CCCHHHHHHHHHHHHHHHHHSSC
T ss_pred EEEeeccccccccCcc------ccccccCCCCCCCcCCHHHHhhcccccc-cccccccCCchHHHHHHHHHHHHHHhCCC
Confidence 9999999997652211 1112234568999999998764211000 01112468889999999999999999999
Q ss_pred CCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHH
Q 001908 909 PTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAK 984 (997)
Q Consensus 909 P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~ 984 (997)
||...... ..... ...++.....+. ..++.++.+++.+||..||++||++.|+++.
T Consensus 238 pf~~~~~~---~~~~~---------~~~~~~~~~~~~--------~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 238 PFQQIINQ---ISKLH---------AIIDPNHEIEFP--------DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTTTCCSH---HHHHH---------HHHCTTSCCCCC--------CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred chhhHHHH---HHHHH---------HHHhcccccCCc--------ccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 99743211 11111 111111111110 0113467899999999999999999999863
No 280
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=9.6e-35 Score=322.81 Aligned_cols=257 Identities=20% Similarity=0.259 Sum_probs=177.8
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch--hhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--GALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|+..+.||+|+||.||+|+++.+++.||||++..... ...+.+.++..+++.++||||+++++++. ..+.
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~-----~~~~ 98 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFI-----TNTD 98 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE-----CSSE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEe-----cCCc
Confidence 3678899999999999999999998999999999974322 22334445555678889999999999964 3558
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
.++||||+ ++.+..+..... ..+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.+||+||
T Consensus 99 ~~lv~e~~-~~~~~~l~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~df 169 (318)
T 2dyl_A 99 VFIAMELM-GTCAEKLKKRMQ-----GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDF 169 (318)
T ss_dssp EEEEECCC-SEEHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEecc-CCcHHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEEC
Confidence 99999999 556666555432 147899999999999999999998 5 8999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++..... .......||+.|+|||.+... ...+..++.++|||||||++|||++|+.||....
T Consensus 170 g~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~ 233 (318)
T 2dyl_A 170 GISGRLVDD---------KAKDRSAGCAAYMAPERIDPP-------DPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233 (318)
T ss_dssp TTC-----------------------CCTTCCHHHHC---------------CCTHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred CCchhccCC---------ccccccCCCccccChhhcccc-------cccccCCccccchhhHHHHHHHHHhCCCCCCCCC
Confidence 999765221 122335689999999887531 1124568899999999999999999999997422
Q ss_pred CCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. ..+....... ...+.... ...++.++.+++.+||..||++||++.|+++
T Consensus 234 ~----~~~~~~~~~~-----~~~~~~~~----------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 234 T----DFEVLTKVLQ-----EEPPLLPG----------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp S----HHHHHHHHHH-----SCCCCCCS----------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c----cHHHHHHHhc-----cCCCCCCc----------cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1 1111111110 00111100 0012456789999999999999999999976
No 281
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=7.2e-35 Score=331.62 Aligned_cols=274 Identities=18% Similarity=0.262 Sum_probs=198.5
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-----------CCCcceEEeeee
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-----------HRNLIKIITVCS 746 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~l~~~~~ 746 (997)
.++|++.+.||+|+||+||+|++..+++.||||++... ....+.+.+|++++++++ |+||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 35799999999999999999999989999999999743 234467788999998876 899999999875
Q ss_pred ccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeC--
Q 001908 747 SIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLD-- 824 (997)
Q Consensus 747 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~-- 824 (997)
... ......++||||+ +++|.+++...... .+++..++.++.||+.||+|||+++ +|+||||||+||+++
T Consensus 97 ~~~-~~~~~~~lv~e~~-~~~L~~~~~~~~~~----~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~ 168 (373)
T 1q8y_A 97 HKG-PNGVHVVMVFEVL-GENLLALIKKYEHR----GIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIV 168 (373)
T ss_dssp EEE-TTEEEEEEEECCC-CEEHHHHHHHTTTS----CCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEE
T ss_pred ccC-CCCceEEEEEecC-CCCHHHHHHHhhcc----CCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEecc
Confidence 421 2234789999999 88999999875422 3889999999999999999999953 899999999999994
Q ss_pred ----CCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHH
Q 001908 825 ----HDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVML 900 (997)
Q Consensus 825 ----~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl 900 (997)
..+.+||+|||+|+.... ......||+.|+|||++. +..++.++|||||||++
T Consensus 169 ~~~~~~~~~kl~Dfg~a~~~~~-----------~~~~~~~t~~y~aPE~~~------------~~~~~~~~Di~slG~il 225 (373)
T 1q8y_A 169 DSPENLIQIKIADLGNACWYDE-----------HYTNSIQTREYRSPEVLL------------GAPWGCGADIWSTACLI 225 (373)
T ss_dssp ETTTTEEEEEECCCTTCEETTB-----------CCCSCCSCGGGCCHHHHH------------TCCCCTHHHHHHHHHHH
T ss_pred CCCcCcceEEEcccccccccCC-----------CCCCCCCCccccCcHHHh------------CCCCCchHhHHHHHHHH
Confidence 445899999999976521 122346899999997664 46689999999999999
Q ss_pred HHHHhCCCCCCcCcCCCc--c---HHHHHHhh--cchhhhh-------hcCc-cccccccc----------chhhhhHHH
Q 001908 901 LEMFTRRRPTNCMFQGGL--T---LHEFCKMA--LPEKVME-------TVDP-SLLLAWSD----------GRRRAKVEE 955 (997)
Q Consensus 901 ~elltg~~P~~~~~~~~~--~---~~~~~~~~--~~~~~~~-------~~d~-~~~~~~~~----------~~~~~~~~~ 955 (997)
|||+||+.||........ . +.+..... .+..... ..+. ........ ......+..
T Consensus 226 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (373)
T 1q8y_A 226 FELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKD 305 (373)
T ss_dssp HHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHH
T ss_pred HHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcc
Confidence 999999999985432110 1 11111100 0111000 0000 00000000 000112345
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 956 CLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 956 ~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
+..++.+++.+||..||++|||+.|+++
T Consensus 306 ~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 306 EAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 6788999999999999999999999976
No 282
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=5.1e-35 Score=326.45 Aligned_cols=263 Identities=21% Similarity=0.280 Sum_probs=176.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHH-HHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECE-VLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~-~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
.++|+..+.||+|+||.||+|..+.+++.||||+++.. .......+.+|+. +++.++||||+++++++. ..+.
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~-----~~~~ 95 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF-----REGD 95 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE-----CSSE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE-----eCCc
Confidence 36788999999999999999999989999999999743 2333455666666 677789999999999964 3568
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.++||||+++ +|.+++...... ....+++..+..++.|++.|+.|||+.. +|+||||||+||+++.++.+||+|||
T Consensus 96 ~~lv~e~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 96 CWICMELMST-SFDKFYKYVYSV-LDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp EEEEECCCSE-EHHHHHHHHHHT-TCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eEEEEeecCC-ChHHHHHHHHhh-hcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCC
Confidence 9999999975 888887641100 0124889999999999999999999853 79999999999999999999999999
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
+++..... .......||+.|+|||++... ..+..++.++|||||||++|||++|+.||.....
T Consensus 172 ~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~--------~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~ 234 (327)
T 3aln_A 172 ISGQLVDS---------IAKTRDAGCRPYMAPERIDPS--------ASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS 234 (327)
T ss_dssp SSCC-----------------------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC--
T ss_pred Cceecccc---------cccccCCCCccccCceeeccc--------cCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcch
Confidence 99765221 112234689999999877421 1245688999999999999999999999974311
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
. .+....... ...+.+... ....++.++.+++.+||..||++|||+.|+++
T Consensus 235 ~----~~~~~~~~~-----~~~~~~~~~--------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 235 V----FDQLTQVVK-----GDPPQLSNS--------EEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp ---------CCCCC-----SCCCCCCCC--------SSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred H----HHHHHHHhc-----CCCCCCCCc--------ccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1 010000000 000111000 00123457889999999999999999999976
No 283
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.4e-33 Score=317.59 Aligned_cols=304 Identities=25% Similarity=0.398 Sum_probs=232.7
Q ss_pred cc-hhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcE
Q 001908 193 NL-SIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEI 271 (997)
Q Consensus 193 ~l-~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 271 (997)
.+ ++++|++++|.+.. +| .+..+++|++|+|++|+++ .+|. +..+++|++|++++|.+++ +| .|.++++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~-~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~ 114 (347)
T 4fmz_A 42 ELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT-DISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRE 114 (347)
T ss_dssp HHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC-CCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSE
T ss_pred hcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc-cchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCE
Confidence 44 35679999999984 55 4899999999999999998 5666 5689999999999999996 34 6999999999
Q ss_pred EeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccc
Q 001908 272 IDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDI 351 (997)
Q Consensus 272 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L 351 (997)
|+|++|++++..+ +..+++|++|++++|..... +..+..+++|++|++++|.+.+..+
T Consensus 115 L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~-------~~~~~~l~~L~~L~l~~~~~~~~~~------------- 172 (347)
T 4fmz_A 115 LYLNEDNISDISP--LANLTKMYSLNLGANHNLSD-------LSPLSNMTGLNYLTVTESKVKDVTP------------- 172 (347)
T ss_dssp EECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCC-------CGGGTTCTTCCEEECCSSCCCCCGG-------------
T ss_pred EECcCCcccCchh--hccCCceeEEECCCCCCccc-------ccchhhCCCCcEEEecCCCcCCchh-------------
Confidence 9999999998765 89999999999999965432 2347889999999999998874332
Q ss_pred cccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCC
Q 001908 352 YMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQ 431 (997)
Q Consensus 352 ~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 431 (997)
+..+++|+.|++++|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|+++
T Consensus 173 --------------~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~ 234 (347)
T 4fmz_A 173 --------------IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKIT 234 (347)
T ss_dssp --------------GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCC
T ss_pred --------------hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccC
Confidence 3445566666666666664333 6666667777777776664433 666677777777777776
Q ss_pred CCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccc
Q 001908 432 GNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTL 511 (997)
Q Consensus 432 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 511 (997)
+..+ +..+++|++|++++|.+++ + ..+..++++ +.|++++|++++. ..+..+++|+.|++++|++++..|..+
T Consensus 235 ~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L-~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l 307 (347)
T 4fmz_A 235 DLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKL-KMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVI 307 (347)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTC-CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHH
T ss_pred CCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCc-CEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHh
Confidence 4333 6667777777777777663 2 345566666 7777777777743 357788899999999999998888889
Q ss_pred cCCcCccEEEccCccccccCChhccccCcCCeeeCcccccc
Q 001908 512 TGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
.++++|+.|++++|++++..| +..+++|+.||+++|.|+
T Consensus 308 ~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 308 GGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp HTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred hccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 999999999999999997666 888999999999999886
No 284
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=324.32 Aligned_cols=271 Identities=22% Similarity=0.242 Sum_probs=195.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc--chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc-CCCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM--QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF-KGAD 754 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~-~~~~ 754 (997)
.++|.+.+.||+|+||.||+|+++.+|+.||||++... .....+.+.+|+.++++++||||+++++++..... ....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 35789999999999999999999999999999999643 33445778999999999999999999999754221 1112
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..++||||++ ++|.+++.. .+++..++.++.||+.||+|||++ +|+||||||+||+++.++.+||+||
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~--------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Df 170 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGL--------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDF 170 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTS--------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECST
T ss_pred eEEEEecccc-CCHHHHhcC--------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeec
Confidence 4699999996 588877643 378899999999999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCc
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMF 914 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~ 914 (997)
|+++.... ......||+.|+|||++.. ...++.++||||+||++|||++|+.||....
T Consensus 171 g~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----------~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 228 (353)
T 3coi_A 171 GLARHADA-----------EMTGYVVTRWYRAPEVILS-----------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKD 228 (353)
T ss_dssp TCTTC-------------------CCSBCCSCHHHHSC-----------CSCCCTTHHHHHHHHHHHHHHHSSCSSBSSC
T ss_pred ccccCCCC-----------CccccccCcCcCCHHHHhC-----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence 99975411 1223578999999976642 2567889999999999999999999997432
Q ss_pred CCCccHHHHHHhh--cchhhhhhcCcccc----cccccc---hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 915 QGGLTLHEFCKMA--LPEKVMETVDPSLL----LAWSDG---RRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 915 ~~~~~~~~~~~~~--~~~~~~~~~d~~~~----~~~~~~---~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.. ..+....... .+......+..... ...... ........+..++.+++.+|+..||++|||+.|+++
T Consensus 229 ~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 229 YL-DQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HH-HHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HH-HHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 11 0111111100 00111111110000 000000 000011133567889999999999999999999975
No 285
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=7.1e-34 Score=320.97 Aligned_cols=268 Identities=21% Similarity=0.315 Sum_probs=195.9
Q ss_pred hhcCccCCcccccCcceEEEEEECCCC-cEEEEEEecccchhhHHHHHHHHHHHhhcCCCC------cceEEeeeeccCc
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENG-TFVAVKILNLMQKGALKSFVAECEVLRNTRHRN------LIKIITVCSSIDF 750 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~l~~~~~~~~~ 750 (997)
.++|++.+.||+|+||+||+|++..++ +.||+|+++.. ....+.+.+|++++++++|++ ++.+++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~---- 92 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFN---- 92 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEE----
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeee----
Confidence 468999999999999999999997666 78999999743 334567888999999987665 888888743
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeee-------
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLL------- 823 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll------- 823 (997)
..+..++||||+ ++++.+++..... ..+++..++.++.||+.||+|||++ +|+||||||+||++
T Consensus 93 -~~~~~~lv~e~~-~~~l~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~ 163 (355)
T 2eu9_A 93 -FHGHMCIAFELL-GKNTFEFLKENNF----QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFET 163 (355)
T ss_dssp -ETTEEEEEEECC-CCBHHHHHHHTTT----CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEE
T ss_pred -eCCeEEEEEecc-CCChHHHHHhccC----CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccc
Confidence 455899999999 6788888876542 2488999999999999999999999 99999999999999
Q ss_pred ------------CCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 824 ------------DHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 824 ------------~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+.++.+||+|||+|+.... ......||+.|+|||++. +..++.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~-----------~~~~~~gt~~y~aPE~~~------------~~~~~~~~ 220 (355)
T 2eu9_A 164 LYNEHKSCEEKSVKNTSIRVADFGSATFDHE-----------HHTTIVATRHYRPPEVIL------------ELGWAQPC 220 (355)
T ss_dssp EECCC-CCCEEEESCCCEEECCCTTCEETTS-----------CCCSSCSCGGGCCHHHHT------------TCCCCTHH
T ss_pred cccccccccccccCCCcEEEeecCccccccc-----------cccCCcCCCcccCCeeee------------cCCCCCcc
Confidence 5688999999999975311 123357899999997664 46789999
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHh--hcchhhhhhcCcccc-----cccccch---------------h
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKM--ALPEKVMETVDPSLL-----LAWSDGR---------------R 949 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~~-----~~~~~~~---------------~ 949 (997)
|||||||++|||++|+.||....... .+...... ..+............ ..+.... .
T Consensus 221 Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 2eu9_A 221 DVWSIGCILFEYYRGFTLFQTHENRE-HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSY 299 (355)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGG
T ss_pred chHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccccc
Confidence 99999999999999999997432111 11111111 111111111100000 0000000 0
Q ss_pred hhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 950 RAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 950 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.........++.+++.+||..||++|||+.|+++
T Consensus 300 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 300 MLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0011233567889999999999999999999974
No 286
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.6e-34 Score=315.28 Aligned_cols=234 Identities=14% Similarity=0.090 Sum_probs=183.8
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 755 (997)
++|++.+.||+|+||.||+|++..+++.||||+++... ....+.+.+|++++++++||||+++++++. ..+.
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~-----~~~~ 105 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVH-----TRAG 105 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEE-----ETTE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEE-----ECCc
Confidence 57999999999999999999999889999999997432 344578899999999999999999999954 3468
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
.|+||||+++++|.++++.. ....++.+++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 106 ~~lv~e~~~g~~L~~~l~~~--------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~ 174 (286)
T 3uqc_A 106 GLVVAEWIRGGSLQEVADTS--------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA 174 (286)
T ss_dssp EEEEEECCCEEEHHHHHTTC--------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC
T ss_pred EEEEEEecCCCCHHHHHhcC--------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc
Confidence 99999999999999999542 24457889999999999999999 99999999999999999999998543
Q ss_pred cchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcC
Q 001908 836 LARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQ 915 (997)
Q Consensus 836 ~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~ 915 (997)
|++| ++.++|||||||++|||+||+.||.....
T Consensus 175 ----------------------------~~~~-------------------~~~~~Di~slG~il~elltg~~Pf~~~~~ 207 (286)
T 3uqc_A 175 ----------------------------TMPD-------------------ANPQDDIRGIGASLYALLVNRWPLPEAGV 207 (286)
T ss_dssp ----------------------------CCTT-------------------CCHHHHHHHHHHHHHHHHHSEECSCCCSB
T ss_pred ----------------------------ccCC-------------------CCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence 3334 67899999999999999999999985422
Q ss_pred CCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHh
Q 001908 916 GGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLAKLCAARQTL 992 (997)
Q Consensus 916 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~~L~~~~~~~ 992 (997)
...... . ......... ........++.++.+++.+||+.||++| |+.|+++.|+++....
T Consensus 208 ~~~~~~-----~-~~~~~~~~~----------~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 208 RSGLAP-----A-ERDTAGQPI----------EPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp CCCSEE-----C-CBCTTSCBC----------CHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred chhhHH-----H-HHHhccCCC----------ChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 110000 0 000000000 0001112345678899999999999999 9999999999977543
No 287
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=6.4e-35 Score=346.40 Aligned_cols=281 Identities=22% Similarity=0.274 Sum_probs=201.1
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccC-cCCCce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSID-FKGADF 755 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~-~~~~~~ 755 (997)
.++|++.++||+|+||+||+|.+..+++.||||+++.. .....+.+.+|++++++++||||+++++++.... +...+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 46899999999999999999999989999999998743 4445678899999999999999999999865422 223667
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCc---EEEc
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMV---AHVS 832 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~---~kl~ 832 (997)
.++||||+++|+|.+++...... ..+++..++.++.|++.|++|||+. +|+||||||+||+++.++. +||+
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~---~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~ 166 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKII 166 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCT---TCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEEC
T ss_pred EEEEEEeCCCCCHHHHHHhcccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEc
Confidence 89999999999999999875421 2477788999999999999999999 9999999999999997764 9999
Q ss_pred ccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCc
Q 001908 833 DFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNC 912 (997)
Q Consensus 833 DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~ 912 (997)
|||.++..... .......||+.|+|||.+ .+..++.++||||+||++|||++|+.||..
T Consensus 167 DFG~a~~~~~~---------~~~~~~~gt~~Y~APE~l------------~~~~~s~ksDIwSLGviLyeLltG~~Pf~~ 225 (676)
T 3qa8_A 167 DLGYAKELDQG---------ELCTEFVGTLQYLAPELL------------EQKKYTVTVDYWSFGTLAFECITGFRPFLP 225 (676)
T ss_dssp SCCCCCBTTSC---------CCCCCCCSCCTTCSSCSS------------CCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ccccccccccc---------cccccccCCcccCChHHh------------ccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 99999865221 122345789999999654 457789999999999999999999999974
Q ss_pred CcCCCccHHHHHHhhcchhhh-hhcCcccccc--cccc--hhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHH-----HH
Q 001908 913 MFQGGLTLHEFCKMALPEKVM-ETVDPSLLLA--WSDG--RRRAKVEECLVTVIRIGVACSMESPIERMEMRD-----VL 982 (997)
Q Consensus 913 ~~~~~~~~~~~~~~~~~~~~~-~~~d~~~~~~--~~~~--~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e-----vl 982 (997)
.. ....|.......... .......... +... .........+..+.+++..||..||++|||+.| ..
T Consensus 226 ~~----~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F 301 (676)
T 3qa8_A 226 NW----QPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCF 301 (676)
T ss_dssp SC----HHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTH
T ss_pred cc----chhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHH
Confidence 21 111111100000000 0000000000 0000 000112234677889999999999999999988 44
Q ss_pred HHHHHHH
Q 001908 983 AKLCAAR 989 (997)
Q Consensus 983 ~~L~~~~ 989 (997)
+.+.++.
T Consensus 302 ~~l~~iL 308 (676)
T 3qa8_A 302 QALDSIL 308 (676)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555544
No 288
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.8e-33 Score=312.87 Aligned_cols=289 Identities=20% Similarity=0.212 Sum_probs=180.5
Q ss_pred CccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeE
Q 001908 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLD 297 (997)
Q Consensus 218 ~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 297 (997)
.+++.+++++|.++ .+|..++ ++|++|++++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 108 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS---PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLY 108 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEE
T ss_pred ccCCEEECCCCCcc-ccCCCCC---CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEE
Confidence 36888888888887 7887664 6788888888888877778888888888888888888888787788777777777
Q ss_pred ccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEec
Q 001908 298 LGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGI 377 (997)
Q Consensus 298 Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 377 (997)
|++|+++.++... . ++| ++|++++|++++..+..|.++++|+.|++
T Consensus 109 L~~n~l~~l~~~~-------~--~~L-------------------------~~L~l~~n~i~~~~~~~~~~l~~L~~L~l 154 (332)
T 2ft3_A 109 ISKNHLVEIPPNL-------P--SSL-------------------------VELRIHDNRIRKVPKGVFSGLRNMNCIEM 154 (332)
T ss_dssp CCSSCCCSCCSSC-------C--TTC-------------------------CEEECCSSCCCCCCSGGGSSCSSCCEEEC
T ss_pred CCCCcCCccCccc-------c--ccC-------------------------CEEECCCCccCccCHhHhCCCccCCEEEC
Confidence 7777776543320 0 233 33344444444333445666677777777
Q ss_pred cCCCCC--CCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCccc
Q 001908 378 EFNQLT--GNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 378 ~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 455 (997)
++|.++ +..|..|..+ +|++|++++|++++ +|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+++
T Consensus 155 ~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~ 230 (332)
T 2ft3_A 155 GGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIR 230 (332)
T ss_dssp CSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCC
T ss_pred CCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCC
Confidence 777775 3556666666 67777777777663 444433 45666666666666555555555555555555555554
Q ss_pred CCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhc
Q 001908 456 GAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSL 535 (997)
Q Consensus 456 ~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 535 (997)
+ ..|..|..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+..|
T Consensus 231 ~-------------------------~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~ 284 (332)
T 2ft3_A 231 M-------------------------IENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDF 284 (332)
T ss_dssp C-------------------------CCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSS
T ss_pred c-------------------------CChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHc
Confidence 4 33344445555555555555555 455555555555555555555554444444
Q ss_pred cc------cCcCCeeeCcccccc--ccCchhccCCCCCCEEeCCCCc
Q 001908 536 RS------LKSIKELDLSCNNLS--GQIPEFLENLSFLEYLNLSYNH 574 (997)
Q Consensus 536 ~~------l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~ls~N~ 574 (997)
.. ...|+.|++++|.+. +..|..|..+++|+.+++++|+
T Consensus 285 ~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 285 CPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred cccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 33 245666666666665 4556666666677777766663
No 289
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=4.2e-34 Score=331.13 Aligned_cols=264 Identities=19% Similarity=0.233 Sum_probs=183.2
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceEEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~~l 758 (997)
.|...+.||+|+||+||.+... +|+.||||++.... .+.+.+|+++++++ +||||+++++++ ...+..++
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~-~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~-----~~~~~~~l 86 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSF-QGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSE-----TTDRFLYI 86 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEES-SSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEE-----ECSSEEEE
T ss_pred eeeccCeEeeCCCeEEEEEEEE-CCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEE-----ecCCeEEE
Confidence 4556788999999999876543 79999999986432 35678899999886 899999999984 44568999
Q ss_pred EEeeccCCCHHHHhhcCCCCCCcC-CCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCC-----------
Q 001908 759 VYEYMQNGSLEEWLHQSNGQPEVC-DLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHD----------- 826 (997)
Q Consensus 759 v~e~~~~gsL~~~l~~~~~~~~~~-~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~----------- 826 (997)
||||++ |+|.+++.......... ..++..++.++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 87 v~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~ 162 (434)
T 2rio_A 87 ALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGA 162 (434)
T ss_dssp EECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred EEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCC
Confidence 999995 69999998765322111 113335678999999999999999 99999999999999754
Q ss_pred --CcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHH
Q 001908 827 --MVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMF 904 (997)
Q Consensus 827 --~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ell 904 (997)
+.+||+|||+|+....... ..........||+.|+|||++.... .......++.++|||||||++|||+
T Consensus 163 ~~~~~kL~DFG~a~~~~~~~~----~~~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~~~DiwSlG~il~ell 233 (434)
T 2rio_A 163 ENLRILISDFGLCKKLDSGQS----SFRTNLNNPSGTSGWRAPELLEESN-----NLQTKRRLTRSIDIFSMGCVFYYIL 233 (434)
T ss_dssp CSCEEEECCCTTCEECCC------------------CCTTSCHHHHSCCC-----TTSCCCCCCTHHHHHHHHHHHHHHH
T ss_pred CceEEEEcccccceecCCCCc----cceeeecCCCCCCCccCHHHhcccc-----ccccccCcchhhhhHhHHHHHHHHH
Confidence 4899999999987632111 0011123457999999998875321 1112366899999999999999999
Q ss_pred h-CCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 905 T-RRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 905 t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
| |+.||...... ........ .+.... .......++.++.+++.+||+.||++|||+.|+++
T Consensus 234 t~g~~Pf~~~~~~---~~~i~~~~--------~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 234 SKGKHPFGDKYSR---ESNIIRGI--------FSLDEM-------KCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp TTSCCTTCSTTTH---HHHHHHTC--------CCCCCC-------TTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hCCCCCCCCchhh---HHHHhcCC--------CCcccc-------cccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 9 99998643211 11111100 000000 00111245667889999999999999999999975
No 290
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2e-33 Score=309.25 Aligned_cols=235 Identities=20% Similarity=0.321 Sum_probs=180.6
Q ss_pred hcCccC-CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHH-hhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSS-NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVL-RNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~-~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|.+. +.||+|+||.||+|.+..+++.||+|+++.. ..+.+|++++ +..+||||+++++++... +.+....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~-~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENL-YAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEE-ETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhh-cCCCceE
Confidence 456666 7799999999999999989999999998642 4567888888 556899999999987542 2335678
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC---CCcEEEcc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH---DMVAHVSD 833 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~---~~~~kl~D 833 (997)
++||||+++|+|.+++...... .+++..++.++.|++.||+|||++ +|+||||||+||+++. ++.+||+|
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~D 163 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGDQ----AFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTD 163 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECC
T ss_pred EEEEeecCCCcHHHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEec
Confidence 9999999999999999876422 488999999999999999999999 9999999999999998 78999999
Q ss_pred cccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcC
Q 001908 834 FGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCM 913 (997)
Q Consensus 834 Fg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~ 913 (997)
||+|... .+..++.++||||+||++|||++|+.||...
T Consensus 164 fg~a~~~------------------------------------------~~~~~~~~~DiwslG~il~el~tg~~pf~~~ 201 (299)
T 3m2w_A 164 FGFAKET------------------------------------------TGEKYDKSCDMWSLGVIMYILLCGYPPFYSN 201 (299)
T ss_dssp CTTCEEC------------------------------------------TTCGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred ccccccc------------------------------------------ccccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence 9988643 0134678999999999999999999999743
Q ss_pred cCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 914 FQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 914 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
.... . . ......+.. ... ....+....++.++.+++.+||..||++|||+.|+++
T Consensus 202 ~~~~-----~-~----~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 202 HGLA-----I-S----PGMKTRIRM---GQY--EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp ----------------CCSCCSSCT---TCC--SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cchh-----h-h----HHHHHHHhh---ccc--cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 2110 0 0 000000000 000 0001111234567889999999999999999999986
No 291
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.1e-33 Score=346.61 Aligned_cols=247 Identities=23% Similarity=0.337 Sum_probs=194.7
Q ss_pred hcCccCCcccccCcceEEEEEECC-CCcEEEEEEeccc-chhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCcCCCceE
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGE-NGTFVAVKILNLM-QKGALKSFVAECEVLRNTRHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
++|++.+.||+|+||+||+|++.. +++.||||++... .......+.+|++++++++||||+++++++...+..+....
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 689999999999999999999975 7899999998643 34455678999999999999999999999876443223337
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccccc
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGL 836 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~ 836 (997)
|+||||+++++|.+++.. .+++.+++.++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+
T Consensus 160 ~lv~E~~~g~~L~~~~~~--------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~ 227 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ--------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGA 227 (681)
T ss_dssp EEEEECCCCEECC----C--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTT
T ss_pred EEEEEeCCCCcHHHHHhC--------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEeccc
Confidence 999999999999987754 388999999999999999999999 99999999999999885 999999999
Q ss_pred chhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCCCcCcCC
Q 001908 837 ARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPTNCMFQG 916 (997)
Q Consensus 837 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~~~~~~~ 916 (997)
++.... .....||+.|+|||++.. .++.++|||||||++|||++|.+||......
T Consensus 228 a~~~~~------------~~~~~gt~~y~aPE~~~~-------------~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~ 282 (681)
T 2pzi_A 228 VSRINS------------FGYLYGTPGFQAPEIVRT-------------GPTVATDIYTVGRTLAALTLDLPTRNGRYVD 282 (681)
T ss_dssp CEETTC------------CSCCCCCTTTSCTTHHHH-------------CSCHHHHHHHHHHHHHHHHSCCCEETTEECS
T ss_pred chhccc------------CCccCCCccccCHHHHcC-------------CCCCceehhhhHHHHHHHHhCCCCCcccccc
Confidence 976521 134579999999987752 2478999999999999999999887632111
Q ss_pred CccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCC-CHHHHHHHHHHHHHH
Q 001908 917 GLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERM-EMRDVLAKLCAARQT 991 (997)
Q Consensus 917 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp-s~~evl~~L~~~~~~ 991 (997)
.. + . ..........+.+++.+||..||++|| +++++.+.+.++..+
T Consensus 283 ~~----------~-------~------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 329 (681)
T 2pzi_A 283 GL----------P-------E------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLRE 329 (681)
T ss_dssp SC----------C-------T------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHHH
T ss_pred cc----------c-------c------------cccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHHH
Confidence 00 0 0 001112345678999999999999999 567777777766543
No 292
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.2e-32 Score=307.65 Aligned_cols=292 Identities=17% Similarity=0.197 Sum_probs=168.7
Q ss_pred CccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeE
Q 001908 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLD 297 (997)
Q Consensus 218 ~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 297 (997)
.+++.++++++.++ .+|..+. ++|++|++++|++++..+..|+++++|++|+|++|++++..|..|+.+++|++|+
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP---PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLY 106 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC---TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CCCeEEEecCCCcc-ccCccCC---CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEE
Confidence 36778888888877 6776654 5678888888888877777788888888888888888877777777777777777
Q ss_pred ccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEec
Q 001908 298 LGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGI 377 (997)
Q Consensus 298 Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 377 (997)
|++|+++.++... .++ |+.|++++|++++..+..|.++++|++|++
T Consensus 107 Ls~n~l~~l~~~~---------~~~-------------------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 152 (330)
T 1xku_A 107 LSKNQLKELPEKM---------PKT-------------------------LQELRVHENEITKVRKSVFNGLNQMIVVEL 152 (330)
T ss_dssp CCSSCCSBCCSSC---------CTT-------------------------CCEEECCSSCCCBBCHHHHTTCTTCCEEEC
T ss_pred CCCCcCCccChhh---------ccc-------------------------ccEEECCCCcccccCHhHhcCCccccEEEC
Confidence 7666665432210 022 222333333333233333444455555555
Q ss_pred cCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCC
Q 001908 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGA 457 (997)
Q Consensus 378 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 457 (997)
++|+++. .+..+..+.++++|+.|++++|+++. +|..+. ++|++|++++|++++.
T Consensus 153 ~~n~l~~----------------------~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~ 207 (330)
T 1xku_A 153 GTNPLKS----------------------SGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKV 207 (330)
T ss_dssp CSSCCCG----------------------GGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEE
T ss_pred CCCcCCc----------------------cCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCcc
Confidence 5555532 11334444444455555555555442 333322 4455555555555544
Q ss_pred cccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccc
Q 001908 458 VPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRS 537 (997)
Q Consensus 458 ~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 537 (997)
.|..+..++++ +.|+|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|..
T Consensus 208 ~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~ 285 (330)
T 1xku_A 208 DAASLKGLNNL-AKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCP 285 (330)
T ss_dssp CTGGGTTCTTC-CEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSC
T ss_pred CHHHhcCCCCC-CEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCC
Confidence 44444444444 55555555555444455566666666666666666 56666666666666666666666555555533
Q ss_pred ------cCcCCeeeCccccccc--cCchhccCCCCCCEEeCCCCc
Q 001908 538 ------LKSIKELDLSCNNLSG--QIPEFLENLSFLEYLNLSYNH 574 (997)
Q Consensus 538 ------l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~ls~N~ 574 (997)
.+.|+.|++++|.+.. ..|..|..+..++.++|++|+
T Consensus 286 ~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 286 PGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp SSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred cccccccccccceEeecCcccccccCccccccccceeEEEecccC
Confidence 2566777777777652 455667777777777777764
No 293
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.5e-33 Score=325.39 Aligned_cols=254 Identities=22% Similarity=0.317 Sum_probs=180.4
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCceE
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGADFK 756 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~~~ 756 (997)
..+|...+.||+|+||+||.... .+++.||||++..... ..+.+|+++++++ +||||+++++++. +....
T Consensus 23 ~~~y~~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~-----~~~~~ 93 (432)
T 3p23_A 23 KISFCPKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEK-----DRQFQ 93 (432)
T ss_dssp TEEEEEEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEE-----ETTEE
T ss_pred cEEEecCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEe-----cCCEE
Confidence 35688899999999999664333 3789999999864322 2356799999999 7999999999854 45689
Q ss_pred EEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCC-----CCcEEE
Q 001908 757 ALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDH-----DMVAHV 831 (997)
Q Consensus 757 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~-----~~~~kl 831 (997)
++||||++ |+|.+++...... .....++.++.||+.||+|||++ +|+||||||+||+++. ...+||
T Consensus 94 ~lv~E~~~-g~L~~~l~~~~~~-----~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL 164 (432)
T 3p23_A 94 YIAIELCA-ATLQEYVEQKDFA-----HLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMI 164 (432)
T ss_dssp EEEEECCS-EEHHHHHHSSSCC-----CCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEE
T ss_pred EEEEECCC-CCHHHHHHhcCCC-----ccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEE
Confidence 99999995 6999999876522 33335678999999999999999 9999999999999953 236889
Q ss_pred cccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHh-CCCCC
Q 001908 832 SDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFT-RRRPT 910 (997)
Q Consensus 832 ~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~ellt-g~~P~ 910 (997)
+|||+|+...... ..........||+.|+|||++... .+..++.++||||+||++|||+| |..||
T Consensus 165 ~DFG~a~~~~~~~-----~~~~~~~~~~gt~~y~APE~l~~~---------~~~~~t~~~DiwSlG~il~ellt~g~~pf 230 (432)
T 3p23_A 165 SDFGLCKKLAVGR-----HSFSRRSGVPGTEGWIAPEMLSED---------CKENPTYTVDIFSAGCVFYYVISEGSHPF 230 (432)
T ss_dssp CCTTEEECC-----------------CCSCTTSCCGGGTSCC------------CCCTHHHHHHHHHHHHHHHTTSCBTT
T ss_pred ecccceeeccCCC-----cceeeccccCCCcCccChhhhhcc---------cccCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 9999998663211 111223346799999999877521 13557789999999999999999 89998
Q ss_pred CcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHH
Q 001908 911 NCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVLA 983 (997)
Q Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl~ 983 (997)
..... ..... ...........+ .......+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~---~~~~~---~~~~~~~~~~~~--------------~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 231 GKSLQ---RQANI---LLGACSLDCLHP--------------EKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp BSTTT---HHHHH---HTTCCCCTTSCT--------------TCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred chhhH---HHHHH---HhccCCccccCc--------------cccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 53211 01110 000000000000 1123445678999999999999999999983
No 294
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=3.7e-32 Score=303.85 Aligned_cols=276 Identities=19% Similarity=0.191 Sum_probs=189.4
Q ss_pred CccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeE
Q 001908 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLD 297 (997)
Q Consensus 218 ~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 297 (997)
++|++|+|++|.++ .+|...+..+++|++|++++|++++..|..|+++++|++|+|++|+++..++..+ ++|++|+
T Consensus 54 ~~l~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~---~~L~~L~ 129 (332)
T 2ft3_A 54 PDTTLLDLQNNDIS-ELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVEIPPNLP---SSLVELR 129 (332)
T ss_dssp TTCCEEECCSSCCC-EECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCSCCSSCC---TTCCEEE
T ss_pred CCCeEEECCCCcCC-ccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCccCcccc---ccCCEEE
Confidence 45666666666666 3433334466677777777777776667777777777777777777775444333 6777777
Q ss_pred ccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEec
Q 001908 298 LGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGI 377 (997)
Q Consensus 298 Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 377 (997)
+++|+++.++. ..+.++++|++|++++|.++. .+..|..|..+ +|++|++
T Consensus 130 l~~n~i~~~~~------~~~~~l~~L~~L~l~~n~l~~-----------------------~~~~~~~~~~l-~L~~L~l 179 (332)
T 2ft3_A 130 IHDNRIRKVPK------GVFSGLRNMNCIEMGGNPLEN-----------------------SGFEPGAFDGL-KLNYLRI 179 (332)
T ss_dssp CCSSCCCCCCS------GGGSSCSSCCEEECCSCCCBG-----------------------GGSCTTSSCSC-CCSCCBC
T ss_pred CCCCccCccCH------hHhCCCccCCEEECCCCcccc-----------------------CCCCcccccCC-ccCEEEC
Confidence 77777765443 235566677777776666541 12456667777 8999999
Q ss_pred cCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCC
Q 001908 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGA 457 (997)
Q Consensus 378 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 457 (997)
++|++++ +|..+. ++|++|+|++|++++..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|+++ .
T Consensus 180 ~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 255 (332)
T 2ft3_A 180 SEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-R 255 (332)
T ss_dssp CSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-B
T ss_pred cCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-e
Confidence 9999996 666554 79999999999999888899999999999999999999888889999999999999999987 6
Q ss_pred cccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcccc--ccCChhc
Q 001908 458 VPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFR--GSIPLSL 535 (997)
Q Consensus 458 ~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~ 535 (997)
+|..+..++++ +.|++++|++++..+..|..... -.....|+.|++++|.+. +..|..|
T Consensus 256 lp~~l~~l~~L-~~L~l~~N~l~~~~~~~~~~~~~------------------~~~~~~l~~L~l~~N~~~~~~~~~~~~ 316 (332)
T 2ft3_A 256 VPAGLPDLKLL-QVVYLHTNNITKVGVNDFCPVGF------------------GVKRAYYNGISLFNNPVPYWEVQPATF 316 (332)
T ss_dssp CCTTGGGCTTC-CEEECCSSCCCBCCTTSSSCSSC------------------CSSSCCBSEEECCSSSSCGGGSCGGGG
T ss_pred cChhhhcCccC-CEEECCCCCCCccChhHcccccc------------------ccccccccceEeecCcccccccCcccc
Confidence 66666666655 56666666666444444432200 000244556666666555 4455666
Q ss_pred cccCcCCeeeCcccc
Q 001908 536 RSLKSIKELDLSCNN 550 (997)
Q Consensus 536 ~~l~~L~~L~Ls~N~ 550 (997)
..+++|+.|+|++|+
T Consensus 317 ~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 317 RCVTDRLAIQFGNYK 331 (332)
T ss_dssp TTBCCSTTEEC----
T ss_pred cccchhhhhhccccc
Confidence 666666666666663
No 295
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=3.4e-33 Score=321.30 Aligned_cols=261 Identities=16% Similarity=0.141 Sum_probs=182.2
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc---hhhHHHHHHHHHHHhhcCC-CCcceEE---------ee
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ---KGALKSFVAECEVLRNTRH-RNLIKII---------TV 744 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~h-~niv~l~---------~~ 744 (997)
.+.|...+.||+|+||+||+|++..+|+.||||+++... ....+.+.+|+.+++.++| +|..... ..
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 156 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEE
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhh
Confidence 346778899999999999999999999999999997332 2235788999999999977 3221111 11
Q ss_pred eec------------cCcCCCceEEEEEeeccCCCHHHHhhcCCC-CCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCc
Q 001908 745 CSS------------IDFKGADFKALVYEYMQNGSLEEWLHQSNG-QPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPI 811 (997)
Q Consensus 745 ~~~------------~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~i 811 (997)
+.. .........+++|+++ +++|.+++..... ......+++..++.++.|+++||+|||++ +|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i 232 (413)
T 3dzo_A 157 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GL 232 (413)
T ss_dssp EECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TE
T ss_pred cccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cc
Confidence 000 0000022456777766 7899999852210 00112467889999999999999999999 99
Q ss_pred EecCCCCCCeeeCCCCcEEEcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccc
Q 001908 812 VHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTG 891 (997)
Q Consensus 812 vHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~ 891 (997)
+||||||+|||++.++.+||+|||+|+.... ......| +.|+|||++....... ....+..++.++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~--~~~~~~~~~~~~ 298 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------SAVSPIG-RGFAPPETTAERMLPF--GQHHPTLMTFAF 298 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTE-----------EECCCCC-TTTCCHHHHHHHTSTT--GGGCCEEECHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCC-----------ccccCCC-CceeCchhhhcccccc--ccccCcCCCchh
Confidence 9999999999999999999999999875411 1234567 9999999885211000 000345678899
Q ss_pred hhHHHHHHHHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhhhhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCC
Q 001908 892 DVYSLGVMLLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVMETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMES 971 (997)
Q Consensus 892 DvwSlGvvl~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 971 (997)
|||||||++|||+||+.||....... ..+..+. .. ..++.++.+++.+||+.|
T Consensus 299 DvwSlGvil~elltg~~Pf~~~~~~~-----------------~~~~~~~-~~---------~~~~~~~~~li~~~l~~d 351 (413)
T 3dzo_A 299 DTWTLGLAIYWIWCADLPNTDDAALG-----------------GSEWIFR-SC---------KNIPQPVRALLEGFLRYP 351 (413)
T ss_dssp HHHHHHHHHHHHHHSSCCCCTTGGGS-----------------CSGGGGS-SC---------CCCCHHHHHHHHHHTCSS
T ss_pred hHHHHHHHHHHHHHCCCCCCCcchhh-----------------hHHHHHh-hc---------ccCCHHHHHHHHHHccCC
Confidence 99999999999999999997432110 0000000 00 012456889999999999
Q ss_pred CCCCCCHHHHHH
Q 001908 972 PIERMEMRDVLA 983 (997)
Q Consensus 972 P~~Rps~~evl~ 983 (997)
|++||++.|+++
T Consensus 352 P~~Rpt~~~~l~ 363 (413)
T 3dzo_A 352 KEDRLLPLQAME 363 (413)
T ss_dssp GGGSCCHHHHTT
T ss_pred hhhCcCHHHHHh
Confidence 999999888754
No 296
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=8e-36 Score=349.76 Aligned_cols=377 Identities=16% Similarity=0.126 Sum_probs=264.6
Q ss_pred CccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcC----CCCCCCCCCCCCcEEeccCccCCCcccccc-cccC-
Q 001908 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSG----SIPESFSNASNIEIIDLPINYFTGKVSIIF-GRLK- 291 (997)
Q Consensus 218 ~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~-~~l~- 291 (997)
++|++|+|++|+++..-...++..+++|++|+|++|.+++ .++..+..+++|++|||++|++++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 4567777777777633333345567777777777777764 345667777778888888777766444333 3455
Q ss_pred ---ccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCccccccc----ccccccccccCcccccc---
Q 001908 292 ---NLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANL----STTMTDIYMGVNQISGT--- 361 (997)
Q Consensus 292 ---~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l----~~~L~~L~l~~N~l~~~--- 361 (997)
+|++|+|++|+++..+.. .++..+..+++|++|++++|.+++..+..+... ..+|+.|++++|++++.
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~--~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 160 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCG--VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE 160 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHH--HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH
T ss_pred CCCceeEEEccCCCCCHHHHH--HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH
Confidence 578888888777642211 245567777788888888887765544444331 23578888888887753
Q ss_pred -cCCCCCCCCCCCEEeccCCCCCCCCCCCccc-----ccccceecccccccccc----chhhhcCCCCCCeEEeecCcCC
Q 001908 362 -IPSGIGNLVNLNLLGIEFNQLTGNIPREIGQ-----LRNLQAIGLSSNFLQGN----IPSSLGNLTLMTDLFLSSNHLQ 431 (997)
Q Consensus 362 -~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 431 (997)
++..+..+++|++|++++|.++...+..+.. .++|++|+|++|.+++. ++..+..+++|+.|+|++|+++
T Consensus 161 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 161 PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 3555666788888888888887554444432 45888888888888864 5777788888888888888876
Q ss_pred CCC-----CCCCCCCCCCcEEecCCCcccCC----cccccccccccccccccCCCcccCCCccccccc-----cccceec
Q 001908 432 GNI-----PPSLGNCKNLVSLNLSDNKLIGA----VPQQILTITTLSRFLDLGNNHLNGSLPLEVGNL-----KNLVALY 497 (997)
Q Consensus 432 ~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~ 497 (997)
+.. +..+..+++|++|++++|.+++. ++..+..++++ +.|++++|.+++..+..+... ++|+.|+
T Consensus 241 ~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~ 319 (461)
T 1z7x_W 241 DVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESL-KELSLAGNELGDEGARLLCETLLEPGCQLESLW 319 (461)
T ss_dssp HHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTC-CEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEE
T ss_pred hHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCc-ceEECCCCCCchHHHHHHHHHhccCCccceeeE
Confidence 432 33344678888888888888753 56667677777 888888888875544444432 6889999
Q ss_pred ccccccccc----ccccccCCcCccEEEccCccccccCChhccc-----cCcCCeeeCccccccc----cCchhccCCCC
Q 001908 498 ISGNQFSGE----IPVTLTGCTGLEIFHMQGNSFRGSIPLSLRS-----LKSIKELDLSCNNLSG----QIPEFLENLSF 564 (997)
Q Consensus 498 Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~ 564 (997)
+++|.+++. ++..+..+++|+.|+|++|++++..+..+.. .++|+.|+|++|++++ .+|..+..+++
T Consensus 320 L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~ 399 (461)
T 1z7x_W 320 VKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHS 399 (461)
T ss_dssp CTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCC
T ss_pred cCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCC
Confidence 999998865 5667778889999999999888766665554 6789999999999886 77888888899
Q ss_pred CCEEeCCCCcCccc--------CCCCCcCCCCcceeecCCCCc
Q 001908 565 LEYLNLSYNHFDGE--------VPTKGVFSNKTRVQLTGNGKL 599 (997)
Q Consensus 565 L~~L~ls~N~l~~~--------~p~~~~~~~~~~~~~~~N~~~ 599 (997)
|++|+|++|++++. +|. ...+++.+.+.++.+-
T Consensus 400 L~~L~l~~N~i~~~~~~~l~~~l~~--~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 400 LRELDLSNNCLGDAGILQLVESVRQ--PGCLLEQLVLYDIYWS 440 (461)
T ss_dssp CCEEECCSSSCCHHHHHHHHHHHTS--TTCCCCEEECTTCCCC
T ss_pred ccEEECCCCCCCHHHHHHHHHHhcc--CCcchhheeecccccC
Confidence 99999999988754 332 1345666666666543
No 297
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=1.1e-35 Score=348.63 Aligned_cols=347 Identities=17% Similarity=0.163 Sum_probs=243.2
Q ss_pred CCCcccCCCccceeeccCCCCCCCCCccccccCC----CccEEEecCCcCcC----CCCCCCCCCCCCcEEeccCccCCC
Q 001908 210 VPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLP----NLQVFAIGDNYFSG----SIPESFSNASNIEIIDLPINYFTG 281 (997)
Q Consensus 210 ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~----~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~ 281 (997)
+|..+..+++|++|+|++|.+++..+..++..++ +|++|+|++|+++. .+|..+..+++|++|+|++|++++
T Consensus 48 l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 127 (461)
T 1z7x_W 48 ISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGD 127 (461)
T ss_dssp HHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHH
T ss_pred HHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCch
Confidence 4556667778888888888877544545555555 68888898888884 568888899999999999999876
Q ss_pred ccccccc-----ccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCc
Q 001908 282 KVSIIFG-----RLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVN 356 (997)
Q Consensus 282 ~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N 356 (997)
..+..+. ..++|++|+|++|+++..... .++..+..+++|++|++++|.+++..+..+.....
T Consensus 128 ~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~--~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~---------- 195 (461)
T 1z7x_W 128 AGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCE--PLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLK---------- 195 (461)
T ss_dssp HHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHH--HHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHH----------
T ss_pred HHHHHHHHHHhcCCCcceEEECCCCCCCHHHHH--HHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHh----------
Confidence 5544433 255788888888887653221 23456677788888888888876443333322100
Q ss_pred ccccccCCCCCCCCCCCEEeccCCCCCCC----CCCCcccccccceeccccccccccc-----hhhhcCCCCCCeEEeec
Q 001908 357 QISGTIPSGIGNLVNLNLLGIEFNQLTGN----IPREIGQLRNLQAIGLSSNFLQGNI-----PSSLGNLTLMTDLFLSS 427 (997)
Q Consensus 357 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~Ls~ 427 (997)
...++|++|++++|++++. ++..+..+++|++|+|++|++++.. +..+..+++|++|+|++
T Consensus 196 ----------~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 196 ----------DSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp ----------HSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred ----------cCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 1234677777777777653 4556666777777777777776532 22333577888888888
Q ss_pred CcCCCC----CCCCCCCCCCCcEEecCCCcccCCcccccccc-----cccccccccCCCcccCC----Cccccccccccc
Q 001908 428 NHLQGN----IPPSLGNCKNLVSLNLSDNKLIGAVPQQILTI-----TTLSRFLDLGNNHLNGS----LPLEVGNLKNLV 494 (997)
Q Consensus 428 N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~ll~~L~Ls~N~l~~~----~p~~~~~l~~L~ 494 (997)
|++++. ++..+..+++|++|+|++|.+.+..+..+... +++ +.|++++|.+++. ++..+..+++|+
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L-~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 344 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL-ESLWVKSCSFTAACCSHFSSVLAQNRFLL 344 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC-CEEECTTSCCBGGGHHHHHHHHHHCSSCC
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc-eeeEcCCCCCchHHHHHHHHHHhhCCCcc
Confidence 877743 45666667788888888887765444444332 355 7888888888765 466677788999
Q ss_pred eeccccccccccccccccC-----CcCccEEEccCccccc----cCChhccccCcCCeeeCccccccccCchhcc-----
Q 001908 495 ALYISGNQFSGEIPVTLTG-----CTGLEIFHMQGNSFRG----SIPLSLRSLKSIKELDLSCNNLSGQIPEFLE----- 560 (997)
Q Consensus 495 ~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----- 560 (997)
+|++++|++++..+..+.. .++|+.|+|++|++++ .+|..+..+++|++|||++|++++.-...+.
T Consensus 345 ~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~ 424 (461)
T 1z7x_W 345 ELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQ 424 (461)
T ss_dssp EEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTS
T ss_pred EEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhcc
Confidence 9999999998766655543 6799999999999986 7888888999999999999999864222222
Q ss_pred CCCCCCEEeCCCCcCcccC
Q 001908 561 NLSFLEYLNLSYNHFDGEV 579 (997)
Q Consensus 561 ~l~~L~~L~ls~N~l~~~~ 579 (997)
....|+.|++.+|.+....
T Consensus 425 ~~~~L~~L~~~~~~~~~~~ 443 (461)
T 1z7x_W 425 PGCLLEQLVLYDIYWSEEM 443 (461)
T ss_dssp TTCCCCEEECTTCCCCHHH
T ss_pred CCcchhheeecccccCHHH
Confidence 2446888888888776543
No 298
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=4.1e-31 Score=295.12 Aligned_cols=267 Identities=22% Similarity=0.248 Sum_probs=210.5
Q ss_pred CCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceec
Q 001908 321 SKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIG 400 (997)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 400 (997)
++|++|+|++|++++..+..+.++ ++|++|++++|++++..|..|+++++|++|++++|+++ .+|..+. ++|++|+
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~ 127 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNL-KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELR 127 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTC-TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEE
T ss_pred CCCeEEECCCCcCCEeChhhhccC-CCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEE
Confidence 355666666666665555555555 56777777777777777888888999999999999998 4565554 7899999
Q ss_pred cccccccccchhhhcCCCCCCeEEeecCcCCC--CCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCc
Q 001908 401 LSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG--NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNH 478 (997)
Q Consensus 401 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~ 478 (997)
+++|++++..+..|.++++|+.|++++|+++. ..+..|.++++|++|++++|+++ .+|..+. +++ +.|++++|+
T Consensus 128 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L-~~L~l~~n~ 203 (330)
T 1xku_A 128 VHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSL-TELHLDGNK 203 (330)
T ss_dssp CCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTC-SEEECTTSC
T ss_pred CCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccC-CEEECCCCc
Confidence 99999998888889999999999999999963 67888999999999999999987 5676554 556 889999999
Q ss_pred ccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchh
Q 001908 479 LNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEF 558 (997)
Q Consensus 479 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 558 (997)
+++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|+|++..+..
T Consensus 204 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 204 ITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp CCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhh
Confidence 98888888999999999999999998877778888999999999999998 78888888999999999999998777777
Q ss_pred ccCC------CCCCEEeCCCCcCcc--cCCC-CCcCCCCcceeecCC
Q 001908 559 LENL------SFLEYLNLSYNHFDG--EVPT-KGVFSNKTRVQLTGN 596 (997)
Q Consensus 559 ~~~l------~~L~~L~ls~N~l~~--~~p~-~~~~~~~~~~~~~~N 596 (997)
|... +.|+.|++++|++.. ..|. ...+..++.+++.+|
T Consensus 283 f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 283 FCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp SSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred cCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 7543 678888888888863 2221 233456677777766
No 299
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.97 E-value=1.4e-32 Score=307.75 Aligned_cols=247 Identities=19% Similarity=0.209 Sum_probs=184.0
Q ss_pred hhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcC---------CCCcce
Q 001908 678 TNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTR---------HRNLIK 740 (997)
Q Consensus 678 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h~niv~ 740 (997)
.++|++.+.||+|+||+||+|++ +++.||||+++... ....+.+.+|+++++.++ ||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 46799999999999999999998 68999999997432 223477889999998885 777777
Q ss_pred EEeeeecc-------------------------CcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHH
Q 001908 741 IITVCSSI-------------------------DFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAID 795 (997)
Q Consensus 741 l~~~~~~~-------------------------~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~ 795 (997)
+.+++... ++...+..++||||+++|++.+.+.+. .+++..++.++.|
T Consensus 97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-------~~~~~~~~~i~~q 169 (336)
T 2vuw_A 97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-------LSSLATAKSILHQ 169 (336)
T ss_dssp EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-------CCCHHHHHHHHHH
T ss_pred hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-------CCCHHHHHHHHHH
Confidence 77764211 012367899999999999777766542 3789999999999
Q ss_pred HHHHHHHHh-hCCCCCcEecCCCCCCeeeCCCC--------------------cEEEcccccchhcccCCCCCccccccc
Q 001908 796 MASAIEYLH-HHCQPPIVHGDLKPSNVLLDHDM--------------------VAHVSDFGLARFLFARPFDTSMETQSS 854 (997)
Q Consensus 796 i~~~L~yLH-~~~~~~ivHrDlk~~NIll~~~~--------------------~~kl~DFg~a~~~~~~~~~~~~~~~~~ 854 (997)
|+.||+||| ++ +|+||||||+|||++.++ .+||+|||+|+....
T Consensus 170 i~~aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------------ 234 (336)
T 2vuw_A 170 LTASLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------------ 234 (336)
T ss_dssp HHHHHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------------
T ss_pred HHHHHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------------
Confidence 999999999 88 999999999999999887 999999999986521
Q ss_pred cccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHH-HHHHHhCCCCCCcCcCCCccHHHHHHhhcchhhh
Q 001908 855 SIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVM-LLEMFTRRRPTNCMFQGGLTLHEFCKMALPEKVM 933 (997)
Q Consensus 855 ~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvv-l~elltg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 933 (997)
....||+.|+|||++. +.. +.++||||+|++ .+++++|..||... .|... ..+...
T Consensus 235 -~~~~gt~~y~aPE~~~------------g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~--------~~~~~-~~~~~~ 291 (336)
T 2vuw_A 235 -GIVVFCDVSMDEDLFT------------GDG-DYQFDIYRLMKKENNNRWGEYHPYSNV--------LWLHY-LTDKML 291 (336)
T ss_dssp -TEEECCCCTTCSGGGC------------CCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH--------HHHHH-HHHHHH
T ss_pred -CcEEEeecccChhhhc------------CCC-ccceehhhhhCCCCcccccccCCCcch--------hhhhH-HHHhhh
Confidence 1347999999997764 233 789999998777 78899999997421 01000 001111
Q ss_pred hhcCcccccccccchhhhhHHHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 001908 934 ETVDPSLLLAWSDGRRRAKVEECLVTVIRIGVACSMESPIERMEMRDVL 982 (997)
Q Consensus 934 ~~~d~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~evl 982 (997)
.... +.............+++.+++.+||+.| |++|++
T Consensus 292 ~~~~------~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 292 KQMT------FKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HTCC------CSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred hhhc------cCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 0000 0111112334567788999999999976 888887
No 300
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.9e-33 Score=340.51 Aligned_cols=477 Identities=16% Similarity=0.134 Sum_probs=261.6
Q ss_pred CHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCeeeeeeecCCCCcEEEEeccCCCCCCcccccccCcccccccccccccc
Q 001908 31 NETDRLALLAIKSQLHDPLGVTNSWNNSINLCQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNF 110 (997)
Q Consensus 31 ~~~~~~aLl~~k~~~~~~~~~~~sW~~~~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l 110 (997)
.++| .|..+-+.+.++.. ...+ +.-|++|.++.+... + .+.+. +.....++..+..+++|++|+|+++..
T Consensus 16 LPde--il~~I~~~L~~~~d-~~~~--s~vck~W~~~~~~~~--~--~l~~~-~~~~~~~~~~~~~~~~L~~L~L~~~~~ 85 (592)
T 3ogk_B 16 TVDD--VIEQVMTYITDPKD-RDSA--SLVCRRWFKIDSETR--E--HVTMA-LCYTATPDRLSRRFPNLRSLKLKGKPR 85 (592)
T ss_dssp CGGG--THHHHHTTCCCHHH-HHHH--TTSCHHHHHHHHHHC--C--EEEES-CGGGSCHHHHHHHCTTCSEEEEECSCG
T ss_pred CCHH--HHHHHHHhcCCHHH-HHHH--HHHhHHHHHhhhccc--c--EEEEe-eccccChHHHHHhCCCCeEEEecCCcc
Confidence 3444 45566655522211 1111 223558999965432 2 22232 223334455677889999999988532
Q ss_pred ---CCCCCccCC------------CCCCCeEEEccCCCccccCCccccCC--Ccccchhcccccccc-cccccccccccc
Q 001908 111 ---HGEIPKEIG------------FLFRLETLMLANNSFSGKIPTNLSSC--SNLLSFVAYRNNLVG-EIPEDIGYSWLK 172 (997)
Q Consensus 111 ---~g~~p~~~~------------~l~~L~~L~Ls~N~l~g~iP~~l~~l--~~L~~l~l~~n~~~g-~ip~~~~~~l~~ 172 (997)
.|.+|..++ .+++|++|+|++|.+++..+..++.+ .+|++|++.+|.... .--..+...+++
T Consensus 86 ~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~ 165 (592)
T 3ogk_B 86 AAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRK 165 (592)
T ss_dssp GGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTT
T ss_pred hhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCC
Confidence 256676655 68899999999999988777777764 448888888776211 111112235678
Q ss_pred cceeecccccccCc----CcCccCcc-hhhhhhccCcccc----ccCCCcccCCCccceeeccCCCCCCCCCccccccCC
Q 001908 173 LEHISLARNHLTGM----LPASIGNL-SIIYLHVGENQFS----GTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLP 243 (997)
Q Consensus 173 L~~L~L~~N~l~g~----~p~~~~~l-~~~~L~l~~N~l~----g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~ 243 (997)
|++|+|++|.+++. ++..+..+ ++.+|++++|.++ +.++..+.++++|++|+|++|.+.+ +|.. +..++
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~-~~~~~ 243 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGF-FKAAA 243 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHH-HHHCT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHH-Hhhhh
Confidence 88888888887654 22222222 2445666666665 3344445556666666666666653 4433 33566
Q ss_pred CccEEEecCCcCc---CCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccC
Q 001908 244 NLQVFAIGDNYFS---GSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNC 320 (997)
Q Consensus 244 ~L~~L~L~~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l 320 (997)
+|+.|+++++... +..+..+..+++|+.|+++++. .+.++..+..+++|++|+|++|.++.. .+...+..+
T Consensus 244 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~L~Ls~~~l~~~-----~~~~~~~~~ 317 (592)
T 3ogk_B 244 NLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMG-PNEMPILFPFAAQIRKLDLLYALLETE-----DHCTLIQKC 317 (592)
T ss_dssp TCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCC-TTTGGGGGGGGGGCCEEEETTCCCCHH-----HHHHHHTTC
T ss_pred HHHhhcccccccccchHHHHHHhhccccccccCccccc-hhHHHHHHhhcCCCcEEecCCCcCCHH-----HHHHHHHhC
Confidence 6666666543222 2334455566666666666542 234455555666666666666654321 122234555
Q ss_pred CCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEecc-----------CCCCCCCC-CC
Q 001908 321 SKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIE-----------FNQLTGNI-PR 388 (997)
Q Consensus 321 ~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~~-p~ 388 (997)
++|++|+++ |.+.. +.++..+..+++|++|+++ .|.+++.. +.
T Consensus 318 ~~L~~L~L~-~~~~~------------------------~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~ 372 (592)
T 3ogk_B 318 PNLEVLETR-NVIGD------------------------RGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIA 372 (592)
T ss_dssp TTCCEEEEE-GGGHH------------------------HHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHH
T ss_pred cCCCEEecc-CccCH------------------------HHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHH
Confidence 666666555 22221 0111122334556666666 24444321 11
Q ss_pred CcccccccceeccccccccccchhhhcC-CCCCCeEEee----cCcCCCC-----CCCCCCCCCCCcEEecCCCcccCCc
Q 001908 389 EIGQLRNLQAIGLSSNFLQGNIPSSLGN-LTLMTDLFLS----SNHLQGN-----IPPSLGNCKNLVSLNLSDNKLIGAV 458 (997)
Q Consensus 389 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~L~~N~l~~~~ 458 (997)
.+..+++|++|+++.|++++..+..+.. +++|+.|+|+ .|++++. ++..+.++++|++|++++|.
T Consensus 373 l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~----- 447 (592)
T 3ogk_B 373 LAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQ----- 447 (592)
T ss_dssp HHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCG-----
T ss_pred HHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCC-----
Confidence 2334566666666666666655555554 6666666665 4555532 11223445555555554322
Q ss_pred ccccccccccccccccCCCcccCCCccccc-cccccceeccccccccc-cccccccCCcCccEEEccCcccccc-CChhc
Q 001908 459 PQQILTITTLSRFLDLGNNHLNGSLPLEVG-NLKNLVALYISGNQFSG-EIPVTLTGCTGLEIFHMQGNSFRGS-IPLSL 535 (997)
Q Consensus 459 p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~ 535 (997)
|.+++..+..+. .+++|+.|++++|++++ .++..+.++++|+.|+|++|++++. ++..+
T Consensus 448 ------------------~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~ 509 (592)
T 3ogk_B 448 ------------------GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAV 509 (592)
T ss_dssp ------------------GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHH
T ss_pred ------------------CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHH
Confidence 112222222222 25667777777777765 3344556677777777777777644 33344
Q ss_pred cccCcCCeeeCccccccccCchhc-cCCCCCCEEeCCCC
Q 001908 536 RSLKSIKELDLSCNNLSGQIPEFL-ENLSFLEYLNLSYN 573 (997)
Q Consensus 536 ~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~ls~N 573 (997)
..+++|+.|+|++|+++..--..+ ..++.+....+..+
T Consensus 510 ~~l~~L~~L~ls~n~it~~~~~~l~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 510 TKLPSLRYLWVQGYRASMTGQDLMQMARPYWNIELIPSR 548 (592)
T ss_dssp HHCSSCCEEEEESCBCCTTCTTGGGGCCTTEEEEEECCC
T ss_pred HhcCccCeeECcCCcCCHHHHHHHHHhCCCcEEEEecCc
Confidence 567777777777777765433333 34565555555443
No 301
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=6.4e-30 Score=305.79 Aligned_cols=86 Identities=15% Similarity=0.266 Sum_probs=57.0
Q ss_pred CCCCCCCCCCCCCCCCeeeeeeec------CCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCC
Q 001908 47 DPLGVTNSWNNSINLCQWAGVTCG------HRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGF 120 (997)
Q Consensus 47 ~~~~~~~sW~~~~~~c~w~gv~C~------~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~ 120 (997)
|.....++|....+||.|+|..|. -....++.|++++|+++ .+|..+. ++|++|+|++|+++ .+|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---c
Confidence 334556788878899999775431 11234777888887776 6666665 67777777777777 5665 4
Q ss_pred CCCCeEEEccCCCccccCCc
Q 001908 121 LFRLETLMLANNSFSGKIPT 140 (997)
Q Consensus 121 l~~L~~L~Ls~N~l~g~iP~ 140 (997)
+++|++|+|++|.++ .||.
T Consensus 80 l~~L~~L~Ls~N~l~-~lp~ 98 (622)
T 3g06_A 80 PPELRTLEVSGNQLT-SLPV 98 (622)
T ss_dssp CTTCCEEEECSCCCS-CCCC
T ss_pred CCCCCEEEcCCCcCC-cCCC
Confidence 677777777777776 4554
No 302
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=2.2e-30 Score=285.99 Aligned_cols=272 Identities=19% Similarity=0.248 Sum_probs=217.5
Q ss_pred EEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC--CCCCcccccccceeccc
Q 001908 325 VLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN--IPREIGQLRNLQAIGLS 402 (997)
Q Consensus 325 ~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~Ls 402 (997)
.++.+++.++ .+|..+. ++++.|++++|+++...+..|.++++|++|+|++|+++.. .|..+.++++|++|+|+
T Consensus 11 ~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 11 EIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred EEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 4455555554 3343322 4566777777777755455678888999999999988733 36677778899999999
Q ss_pred cccccccchhhhcCCCCCCeEEeecCcCCCCCC-CCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccC
Q 001908 403 SNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIP-PSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNG 481 (997)
Q Consensus 403 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~ 481 (997)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|++|++++|.+.+..|..+..++++ +.|++++|.+++
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~ 164 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQE 164 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTC-CEEECTTCEEGG
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCC-CEEECCCCcccc
Confidence 99988 577778889999999999999986555 578889999999999999988888888888888 889999999886
Q ss_pred -CCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhcc
Q 001908 482 -SLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLE 560 (997)
Q Consensus 482 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (997)
.+|..+..+++|++|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|||++|++++..|..+.
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 244 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQ 244 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHH
Confidence 5788899999999999999999988888999999999999999999987788899999999999999999999999999
Q ss_pred CCC-CCCEEeCCCCcCcccCCCC---CcCCCCcceeecCCCCcCCC
Q 001908 561 NLS-FLEYLNLSYNHFDGEVPTK---GVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 561 ~l~-~L~~L~ls~N~l~~~~p~~---~~~~~~~~~~~~~N~~~C~~ 602 (997)
.++ +|++|+|++|++++..+.. ..+.....+....+...|..
T Consensus 245 ~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~ 290 (306)
T 2z66_A 245 HFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECAT 290 (306)
T ss_dssp CCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEE
T ss_pred hhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCC
Confidence 884 8999999999999876532 12233344455566677754
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=6.3e-30 Score=282.31 Aligned_cols=280 Identities=19% Similarity=0.183 Sum_probs=132.9
Q ss_pred ceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcc--cccccccCccCeeEc
Q 001908 221 ENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKV--SIIFGRLKNLWSLDL 298 (997)
Q Consensus 221 ~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--~~~~~~l~~L~~L~L 298 (997)
+.++++++.++ .+|..++ ++|++|+|++|+++...+..|.++++|++|+|++|+++... +..+..+
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~-------- 77 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGT-------- 77 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSC--------
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccc--------
Confidence 45667777766 5665443 45666666666666433334556666666666666555321 2333333
Q ss_pred cCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccC-CCCCCCCCCCEEec
Q 001908 299 GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP-SGIGNLVNLNLLGI 377 (997)
Q Consensus 299 s~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~L~L 377 (997)
++|++|++++|.+. .+|..+..+ ++|+.|++++|++++..+ ..+.++++|++|++
T Consensus 78 ----------------------~~L~~L~Ls~n~i~-~l~~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l 133 (306)
T 2z66_A 78 ----------------------TSLKYLDLSFNGVI-TMSSNFLGL-EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDI 133 (306)
T ss_dssp ----------------------SCCCEEECCSCSEE-EEEEEEETC-TTCCEEECTTSEEESSTTTTTTTTCTTCCEEEC
T ss_pred ----------------------cccCEEECCCCccc-cChhhcCCC-CCCCEEECCCCcccccccchhhhhccCCCEEEC
Confidence 44444444444433 122222222 223333333333332222 34444555555555
Q ss_pred cCCCCCCCCCCCcccccccceeccccccccc-cchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC
Q 001908 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQG-NIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 378 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 456 (997)
++|++++..|..|.++++|++|+|++|.+++ .+|..+..+++|+.|+|++|++++..|..|..+++|++|+|++|+++
T Consensus 134 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~- 212 (306)
T 2z66_A 134 SHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF- 212 (306)
T ss_dssp TTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC-
Confidence 5555555445555555555555555555543 34444444444555555554444444444444444444444444443
Q ss_pred CcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCc-CccEEEccCccccccCC--h
Q 001908 457 AVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCT-GLEIFHMQGNSFRGSIP--L 533 (997)
Q Consensus 457 ~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~ 533 (997)
+..+..+..+++|+.|+|++|++++..|..+..++ +|+.|+|++|++++..+ .
T Consensus 213 ------------------------~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~ 268 (306)
T 2z66_A 213 ------------------------SLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQS 268 (306)
T ss_dssp ------------------------BCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHH
T ss_pred ------------------------ccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHH
Confidence 22333344455555555555555555555555552 55555555555554321 1
Q ss_pred hccccCcCCeeeCccccccccCchhccC
Q 001908 534 SLRSLKSIKELDLSCNNLSGQIPEFLEN 561 (997)
Q Consensus 534 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 561 (997)
....+...+.+.+..+.+....|..+.+
T Consensus 269 ~~~~l~~~~~~~~~~~~~~C~~p~~~~g 296 (306)
T 2z66_A 269 FLQWIKDQRQLLVEVERMECATPSDKQG 296 (306)
T ss_dssp HHHHHHHTGGGBSCGGGCBEEESGGGTT
T ss_pred HHHHHHhhhhhhccccccccCCchhhCC
Confidence 1122333444445555555555555443
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=4e-30 Score=289.90 Aligned_cols=233 Identities=17% Similarity=0.182 Sum_probs=139.6
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccch-hhhcCCCCCCeEEe
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIP-SSLGNLTLMTDLFL 425 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L 425 (997)
+|+.|++++|++++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|++++..+ ..+.++++|++|++
T Consensus 77 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 77 NLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRV 156 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEE
T ss_pred CCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEEC
Confidence 34444444444444444555555666666666666664444445566666666666666653222 25556666666666
Q ss_pred ecC-cCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccc
Q 001908 426 SSN-HLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFS 504 (997)
Q Consensus 426 s~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 504 (997)
++| .+++..+..|.++++|++|++++|++++..|..+..++++ +.|++++|+++...+..+..+++|+.|++++|+++
T Consensus 157 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L-~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~ 235 (353)
T 2z80_A 157 GNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNV-SHLILHMKQHILLLEIFVDVTSSVECLELRDTDLD 235 (353)
T ss_dssp EESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEE-EEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCT
T ss_pred CCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccC-CeecCCCCccccchhhhhhhcccccEEECCCCccc
Confidence 666 3554445556666666666666666665555566666655 56666666665322223344666777777777776
Q ss_pred cccccccc---CCcCccEEEccCccccc----cCChhccccCcCCeeeCccccccccCchh-ccCCCCCCEEeCCCCcCc
Q 001908 505 GEIPVTLT---GCTGLEIFHMQGNSFRG----SIPLSLRSLKSIKELDLSCNNLSGQIPEF-LENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 505 ~~~p~~~~---~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~ 576 (997)
+..+..+. ....++.++|++|.+++ .+|..+..+++|+.|||++|+|+ .+|.. |..+++|++|+|++|+++
T Consensus 236 ~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~ 314 (353)
T 2z80_A 236 TFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWD 314 (353)
T ss_dssp TCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCcc
Confidence 54444332 34566677777777665 36677777888888888888887 44444 577888888888888888
Q ss_pred ccCCC
Q 001908 577 GEVPT 581 (997)
Q Consensus 577 ~~~p~ 581 (997)
+.+|.
T Consensus 315 ~~~~~ 319 (353)
T 2z80_A 315 CSCPR 319 (353)
T ss_dssp CCHHH
T ss_pred CcCCC
Confidence 77763
No 305
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.96 E-value=1.1e-31 Score=315.16 Aligned_cols=241 Identities=17% Similarity=0.177 Sum_probs=174.3
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEee
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (997)
+|+.|+|++|.|++..|..|+++++|++|+|++|.+++..| |..+++|++|+|++|.|++..+ .++|+.|+|+
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L~L~ 107 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETLHAA 107 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEEECC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEEECc
Confidence 45555556666665566677777788888888888876655 7778888888888888875332 2778888888
Q ss_pred cCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccc-cccccceeccccccccc
Q 001908 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVG-NLKNLVALYISGNQFSG 505 (997)
Q Consensus 427 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~ 505 (997)
+|+|++..+.. +++|+.|+|++|.+++..|..+..+++| +.|+|++|.+++..|..+. .+++|+.|+|++|.+++
T Consensus 108 ~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~ 183 (487)
T 3oja_A 108 NNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRV-QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYD 183 (487)
T ss_dssp SSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSE-EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCE
T ss_pred CCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCC-CEEECCCCCCCCcChHHHhhhCCcccEEecCCCcccc
Confidence 88888665543 4678888888888887777777777777 7888888888877777775 67888888888888885
Q ss_pred cccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCc-ccCCCC-C
Q 001908 506 EIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD-GEVPTK-G 583 (997)
Q Consensus 506 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-~~~p~~-~ 583 (997)
..+ +..+++|+.|+|++|+|++ +|..+..+++|+.|||++|+|++ +|..+..+++|+.|++++|+++ +.+|.. .
T Consensus 184 ~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~ 259 (487)
T 3oja_A 184 VKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFS 259 (487)
T ss_dssp EEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHT
T ss_pred ccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHH
Confidence 522 3357888888888888885 44458888888888888888885 6777888888888888888887 333321 2
Q ss_pred cCCCCcceeec-------CCCCcCCC
Q 001908 584 VFSNKTRVQLT-------GNGKLCGG 602 (997)
Q Consensus 584 ~~~~~~~~~~~-------~N~~~C~~ 602 (997)
.++.+..+.+. +|++.|.+
T Consensus 260 ~l~~L~~l~~~~~~~~~~~~~~~c~~ 285 (487)
T 3oja_A 260 KNQRVQTVAKQTVKKLTGQNEEECTV 285 (487)
T ss_dssp TCHHHHHHHHHHHHHHTSSSSCCCSS
T ss_pred hCCCCcEEeccccccccCCCcccccC
Confidence 33344444444 66666654
No 306
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=286.37 Aligned_cols=279 Identities=17% Similarity=0.188 Sum_probs=235.0
Q ss_pred cCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccce
Q 001908 319 NCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQA 398 (997)
Q Consensus 319 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 398 (997)
.|+.....++++|.++ .+|..+. ++++.|++++|+|++..+..|.++++|++|++++|++++..|..|.++++|++
T Consensus 29 ~C~~~~~c~~~~~~l~-~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (353)
T 2z80_A 29 SCDRNGICKGSSGSLN-SIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEH 104 (353)
T ss_dssp EECTTSEEECCSTTCS-SCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCCeEeeCCCCCcc-ccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCE
Confidence 3444555677777777 4555443 46888889999998777779999999999999999999988999999999999
Q ss_pred eccccccccccchhhhcCCCCCCeEEeecCcCCCCCC-CCCCCCCCCcEEecCCCc-ccCCcccccccccccccccccCC
Q 001908 399 IGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIP-PSLGNCKNLVSLNLSDNK-LIGAVPQQILTITTLSRFLDLGN 476 (997)
Q Consensus 399 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~ll~~L~Ls~ 476 (997)
|+|++|++++..+..|.++++|++|+|++|++++..+ ..|.++++|++|++++|. +.+..|..+..++++ +.|++++
T Consensus 105 L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L-~~L~l~~ 183 (353)
T 2z80_A 105 LDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFL-EELEIDA 183 (353)
T ss_dssp EECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE-EEEEEEE
T ss_pred EECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCC-CEEECCC
Confidence 9999999997766779999999999999999996444 489999999999999994 665556788889998 9999999
Q ss_pred CcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhcc---ccCcCCeeeCccccccc
Q 001908 477 NHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLR---SLKSIKELDLSCNNLSG 553 (997)
Q Consensus 477 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~ 553 (997)
|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|++++..+..+. ....++.++|++|.+++
T Consensus 184 n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~ 263 (353)
T 2z80_A 184 SDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITD 263 (353)
T ss_dssp TTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCH
T ss_pred CCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccC
Confidence 999999999999999999999999999744444456689999999999999977665543 35678888888888876
Q ss_pred ----cCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCCC
Q 001908 554 ----QIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 554 ----~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~ 602 (997)
.+|..+..+++|++|+|++|+++..++.. ..+++++.+++.+||+.|.+
T Consensus 264 ~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~ 317 (353)
T 2z80_A 264 ESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 317 (353)
T ss_dssp HHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcC
Confidence 57889999999999999999999544443 57889999999999999975
No 307
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.5e-29 Score=278.53 Aligned_cols=211 Identities=21% Similarity=0.310 Sum_probs=175.1
Q ss_pred ccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCC
Q 001908 361 TIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGN 440 (997)
Q Consensus 361 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 440 (997)
.+|..++++++|++|+|++|+++ .+|..|+++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 95 ~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~ 172 (328)
T 4fcg_A 95 QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAS 172 (328)
T ss_dssp SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEE
T ss_pred hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhh
Confidence 44555666677777777777777 67777777777777777777777 66777777777888888877777777776654
Q ss_pred ---------CCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccc
Q 001908 441 ---------CKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTL 511 (997)
Q Consensus 441 ---------l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 511 (997)
+++|++|+|++|+++ .+|..+..+++| +.|+|++|++++ +|..++.+++|++|+|++|++.+.+|..|
T Consensus 173 ~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L-~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~ 249 (328)
T 4fcg_A 173 TDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL-KSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIF 249 (328)
T ss_dssp EC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC-CEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCT
T ss_pred ccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC-CEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHh
Confidence 888888888888887 778888888887 888888888884 56678889999999999999999999999
Q ss_pred cCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCc
Q 001908 512 TGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 576 (997)
.++++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+.+|..+.++++|+.+++..|.+.
T Consensus 250 ~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 250 GGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred cCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 99999999999999999899999999999999999999999999999999999999999887765
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.7e-29 Score=287.66 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=197.0
Q ss_pred CCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecc
Q 001908 322 KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGL 401 (997)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 401 (997)
..+.++.+++.++ .+|..+. +.++.|+|++|+|++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L 119 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLEL 119 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEEC
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEEC
Confidence 4667888888888 5666554 56788888888888888888888888888888888888777788888888888888
Q ss_pred ccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc-ccccccccccccccCCCccc
Q 001908 402 SSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLN 480 (997)
Q Consensus 402 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~ 480 (997)
++|+|++..+..|..+++|+.|+|++|+|++..+..|.++++|++|+|++|+..+.++. .+..+++| ++|+|++|+++
T Consensus 120 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~ 198 (440)
T 3zyj_A 120 FDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNL-RYLNLAMCNLR 198 (440)
T ss_dssp CSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSC-CEEECTTSCCS
T ss_pred CCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhccccc-CeecCCCCcCc
Confidence 88888876666788888888888888888877777888888888888888554445544 56667776 77888888877
Q ss_pred CCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhcc
Q 001908 481 GSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLE 560 (997)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (997)
.+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..|.
T Consensus 199 -~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 276 (440)
T 3zyj_A 199 -EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFT 276 (440)
T ss_dssp -SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTS
T ss_pred -ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhc
Confidence 445 367777788888888888777777777788888888888888777777777778888888888888776667777
Q ss_pred CCCCCCEEeCCCCcCcccCC
Q 001908 561 NLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 561 ~l~~L~~L~ls~N~l~~~~p 580 (997)
.+++|+.|+|++|+|.+...
T Consensus 277 ~l~~L~~L~L~~Np~~CdC~ 296 (440)
T 3zyj_A 277 PLHHLERIHLHHNPWNCNCD 296 (440)
T ss_dssp SCTTCCEEECCSSCEECSST
T ss_pred cccCCCEEEcCCCCccCCCC
Confidence 77777777777777776554
No 309
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1.2e-30 Score=288.68 Aligned_cols=245 Identities=20% Similarity=0.226 Sum_probs=194.8
Q ss_pred CCcEEEeecCccCCCCcccccccccccccccccCccc-ccccCCCCC-------CCCCCCEEeccCCCCCCCCCCCc--c
Q 001908 322 KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQI-SGTIPSGIG-------NLVNLNLLGIEFNQLTGNIPREI--G 391 (997)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~~--~ 391 (997)
+|++|++++|.+ .+|..+.. .++.|++++|++ .+.+|..+. ++++|++|+|++|++++.+|..+ .
T Consensus 44 ~L~~l~l~~n~l--~~p~~~~~---~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~ 118 (312)
T 1wwl_A 44 SLEYLLKRVDTE--ADLGQFTD---IIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEA 118 (312)
T ss_dssp ECTTHHHHCCTT--CCCHHHHH---HHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSC
T ss_pred CceeEeeccccc--ccHHHHHH---HHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHh
Confidence 333444444444 34444332 266677777777 345555554 68899999999999998888876 8
Q ss_pred cccccceeccccccccccchhhhcCC-----CCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCC--ccccc--
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNL-----TLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGA--VPQQI-- 462 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~-- 462 (997)
.+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..|..|+++++|++|+|++|++.+. +|..+
T Consensus 119 ~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 197 (312)
T 1wwl_A 119 TGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCP 197 (312)
T ss_dssp CSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCT
T ss_pred cCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHh
Confidence 899999999999999976 8878777 8999999999999988889999999999999999998765 34444
Q ss_pred ccccccccccccCCCcccCC--Cc-cccccccccceecccccccccccc-ccccCCcCccEEEccCccccccCChhcccc
Q 001908 463 LTITTLSRFLDLGNNHLNGS--LP-LEVGNLKNLVALYISGNQFSGEIP-VTLTGCTGLEIFHMQGNSFRGSIPLSLRSL 538 (997)
Q Consensus 463 ~~l~~ll~~L~Ls~N~l~~~--~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 538 (997)
..++++ +.|+|++|++++. ++ ..+.++++|++|+|++|++++.+| ..+..+++|++|+|++|+|+ .+|..+.
T Consensus 198 ~~l~~L-~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-- 273 (312)
T 1wwl_A 198 LKFPTL-QVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-- 273 (312)
T ss_dssp TSCTTC-CEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--
T ss_pred ccCCCC-CEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--
Confidence 677887 8999999999832 22 344678899999999999998775 46677899999999999998 7887776
Q ss_pred CcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 539 KSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 539 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
++|+.|||++|+|++. |. +..+++|++|+|++|++++.
T Consensus 274 ~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 274 AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTCC
T ss_pred CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCCC
Confidence 8999999999999976 66 88999999999999999863
No 310
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.1e-28 Score=287.99 Aligned_cols=253 Identities=20% Similarity=0.300 Sum_probs=218.3
Q ss_pred CCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecc
Q 001908 322 KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGL 401 (997)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 401 (997)
....++.+++.++ .+|..+. +.++.|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 55 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 55 QFSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 4578899999988 5666543 57899999999999998999999999999999999999888899999999999999
Q ss_pred ccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc-ccccccccccccccCCCccc
Q 001908 402 SSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLN 480 (997)
Q Consensus 402 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~ 480 (997)
++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|++++|+..+.+|. .+..+++| ++|+|++|+++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L-~~L~L~~n~l~ 209 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNL-KYLNLGMCNIK 209 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTC-CEEECTTSCCS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCC-CEEECCCCccc
Confidence 99999987777899999999999999999977777899999999999999554445654 56777787 88999999998
Q ss_pred CCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhcc
Q 001908 481 GSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLE 560 (997)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 560 (997)
+ +| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|..+++|+.|||++|+|++..+..|.
T Consensus 210 ~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 287 (452)
T 3zyi_A 210 D-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFT 287 (452)
T ss_dssp S-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSST
T ss_pred c-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhc
Confidence 5 44 478888999999999999888888899999999999999999888888888899999999999999877777888
Q ss_pred CCCCCCEEeCCCCcCcccCCC
Q 001908 561 NLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 561 ~l~~L~~L~ls~N~l~~~~p~ 581 (997)
.+++|+.|+|++|++.+....
T Consensus 288 ~l~~L~~L~L~~Np~~CdC~~ 308 (452)
T 3zyi_A 288 PLRYLVELHLHHNPWNCDCDI 308 (452)
T ss_dssp TCTTCCEEECCSSCEECSTTT
T ss_pred cccCCCEEEccCCCcCCCCCc
Confidence 888999999999988877653
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1.2e-28 Score=287.43 Aligned_cols=247 Identities=19% Similarity=0.175 Sum_probs=158.5
Q ss_pred cCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCC
Q 001908 293 LWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNL 372 (997)
Q Consensus 293 L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L 372 (997)
...++.+++.++.++.. -.++|++|+|++|++++..|..|.++ ++|+.|+|++|+|++..|..|.++++|
T Consensus 56 ~~~v~c~~~~l~~iP~~---------~~~~l~~L~L~~n~i~~~~~~~~~~l-~~L~~L~Ls~n~i~~~~~~~~~~l~~L 125 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQG---------IPSNTRYLNLMENNIQMIQADTFRHL-HHLEVLQLGRNSIRQIEVGAFNGLASL 125 (452)
T ss_dssp SCEEECCSSCCSSCCSC---------CCTTCSEEECCSSCCCEECTTTTTTC-TTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred CcEEEECCCCcCccCCC---------CCCCccEEECcCCcCceECHHHcCCC-CCCCEEECCCCccCCcChhhccCcccC
Confidence 45566666666655432 11466666666666666666666665 566666666666666666666666666
Q ss_pred CEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeec-CcCCCCCCCCCCCCCCCcEEecCC
Q 001908 373 NLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSS-NHLQGNIPPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 373 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~ 451 (997)
++|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|+.|+|++ |.+....+..|.++++|++|+|++
T Consensus 126 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 205 (452)
T 3zyi_A 126 NTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGM 205 (452)
T ss_dssp CEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCC
Confidence 7777766666665555666666666677766666655555666666666666666 344433334566666666677766
Q ss_pred CcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccC
Q 001908 452 NKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI 531 (997)
Q Consensus 452 N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (997)
|++++ +| .+..+++| +.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|++|+|++..
T Consensus 206 n~l~~-~~-~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 282 (452)
T 3zyi_A 206 CNIKD-MP-NLTPLVGL-EELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLP 282 (452)
T ss_dssp SCCSS-CC-CCTTCTTC-CEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred Ccccc-cc-cccccccc-cEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccC
Confidence 66653 33 35555665 66666666666666666666666666677666666666666666666666777666666555
Q ss_pred ChhccccCcCCeeeCcccccc
Q 001908 532 PLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
+..|..+++|+.|+|++|.+.
T Consensus 283 ~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 283 HDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp TTSSTTCTTCCEEECCSSCEE
T ss_pred hHHhccccCCCEEEccCCCcC
Confidence 556666666666666666664
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=286.25 Aligned_cols=248 Identities=23% Similarity=0.237 Sum_probs=144.9
Q ss_pred ccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecC
Q 001908 349 TDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN 428 (997)
Q Consensus 349 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 428 (997)
..++..++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 46 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n 122 (440)
T 3zyj_A 46 SKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDN 122 (440)
T ss_dssp CEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCC
Confidence 34455555555 4444443 45666666666666555566666666666666666666555556666666666666666
Q ss_pred cCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCC-cccCCCccccccccccceeccccccccccc
Q 001908 429 HLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNN-HLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 429 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
+|++..+..|..+++|++|+|++|++.+..+..+..+++| +.|+|++| .+....+..|.++++|++|+|++|+++ .+
T Consensus 123 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~ 200 (440)
T 3zyj_A 123 RLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSL-RRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EI 200 (440)
T ss_dssp CCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTC-CEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SC
T ss_pred cCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCccc-CEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cc
Confidence 6665445556666666666666666654444455555555 56666653 333233335566666666666666665 34
Q ss_pred cccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCC
Q 001908 508 PVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFS 586 (997)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~ 586 (997)
| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|++++.++.. ..+.
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 4 3555666666666666666555666666666666666666666655666666666666666666666544432 3445
Q ss_pred CCcceeecCCCCcCCC
Q 001908 587 NKTRVQLTGNGKLCGG 602 (997)
Q Consensus 587 ~~~~~~~~~N~~~C~~ 602 (997)
+++.+++.+|||.|+|
T Consensus 280 ~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 280 HLERIHLHHNPWNCNC 295 (440)
T ss_dssp TCCEEECCSSCEECSS
T ss_pred CCCEEEcCCCCccCCC
Confidence 5566666666666654
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.96 E-value=1e-29 Score=281.14 Aligned_cols=253 Identities=18% Similarity=0.199 Sum_probs=166.0
Q ss_pred cccccceeecccccccCcCcCccCcchhhhhhccCccc-cccCCCccc-------CCCccceeeccCCCCCCCCCcccc-
Q 001908 169 SWLKLEHISLARNHLTGMLPASIGNLSIIYLHVGENQF-SGTVPPSLY-------NMSSLENILLDVNGFTGNLPLDIG- 239 (997)
Q Consensus 169 ~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~~N~l-~g~ip~~l~-------~l~~L~~L~L~~N~l~g~lp~~~~- 239 (997)
...+|++|++++|.+ .+|..+... +.+|++++|++ .+.+|..+. ++++|++|+|++|+++|.+|..++
T Consensus 41 ~~~~L~~l~l~~n~l--~~p~~~~~~-L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~ 117 (312)
T 1wwl_A 41 GGRSLEYLLKRVDTE--ADLGQFTDI-IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLE 117 (312)
T ss_dssp EEEECTTHHHHCCTT--CCCHHHHHH-HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSS
T ss_pred cCCCceeEeeccccc--ccHHHHHHH-HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHH
Confidence 344556666666666 555544433 45566666666 345666555 677888888888888877887764
Q ss_pred ccCCCccEEEecCCcCcCCCCCCCCCC-----CCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchh
Q 001908 240 VTLPNLQVFAIGDNYFSGSIPESFSNA-----SNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFV 314 (997)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 314 (997)
..+++|++|+|++|++++. |..++.+ ++|++|+|++|++++..+..|+.+++|++|+|++|++.+. ..++
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~----~~~~ 192 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGE----RGLI 192 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHH----HHHH
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcc----hHHH
Confidence 5778888888888888876 7777766 7888888888888887777888888888888888876431 0122
Q ss_pred hhh--ccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC-CCcc
Q 001908 315 TIL--TNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP-REIG 391 (997)
Q Consensus 315 ~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~ 391 (997)
..+ ..+++|++|+|++|++++. +. .....+.++++|++|+|++|++++.+| ..+.
T Consensus 193 ~~~~~~~l~~L~~L~L~~N~l~~~-~~---------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 193 SALCPLKFPTLQVLALRNAGMETP-SG---------------------VCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp HHSCTTSCTTCCEEECTTSCCCCH-HH---------------------HHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred HHHHhccCCCCCEEECCCCcCcch-HH---------------------HHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 333 6677777777777777631 10 001122345566666666666666554 3455
Q ss_pred cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC
Q 001908 392 QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 456 (997)
.+++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 251 ~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 251 WPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 5666777777777776 5666555 6677777777777754 44 6677777777777777653
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=4.3e-29 Score=272.54 Aligned_cols=232 Identities=23% Similarity=0.268 Sum_probs=151.0
Q ss_pred CCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCc-CCCCCCCCCCCCCCCcEEe
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNH-LQGNIPPSLGNCKNLVSLN 448 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~ 448 (997)
++|++|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+ ++...|..|..+++|++|+
T Consensus 32 ~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~ 111 (285)
T 1ozn_A 32 AASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLH 111 (285)
T ss_dssp TTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEE
T ss_pred CCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEE
Confidence 345555555555554444455555555555555555554445555555555555555554 4444455555555555555
Q ss_pred cCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcccc
Q 001908 449 LSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFR 528 (997)
Q Consensus 449 L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (997)
+++|++++..|..+..++++ ++|++++|++++..+..|+.+++|+.|+|++|++++..+..|.++++|+.|++++|+++
T Consensus 112 l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 112 LDRCGLQELGPGLFRGLAAL-QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp CTTSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred CCCCcCCEECHhHhhCCcCC-CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 55555554445555555555 55666666666555556777778888888888887666666888888888888888888
Q ss_pred ccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 529 GSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
+..|..|..+++|+.|+|++|++++..+..+..+++|++|+|++|++++..+..+.+..+.......|...|..
T Consensus 191 ~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~ 264 (285)
T 1ozn_A 191 HVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSL 264 (285)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEE
T ss_pred ccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCC
Confidence 77788888888888888888888876667788888888888888888877665433334445555666666753
No 315
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.1e-31 Score=325.06 Aligned_cols=425 Identities=12% Similarity=0.075 Sum_probs=261.3
Q ss_pred cCCCCCccCCCCCCCeEEEccCCCc---cccCCccccCCCcccchhcccccccccccccccccccccceeecccccccCc
Q 001908 110 FHGEIPKEIGFLFRLETLMLANNSF---SGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGM 186 (997)
Q Consensus 110 l~g~~p~~~~~l~~L~~L~Ls~N~l---~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~ 186 (997)
+...++..+..+++|++|+|+++.. .|.+|..++.... .....+...+++|++|+|++|.+++.
T Consensus 61 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~-------------~~l~~l~~~~~~L~~L~L~~~~i~~~ 127 (592)
T 3ogk_B 61 YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVT-------------PWVTEISNNLRQLKSVHFRRMIVSDL 127 (592)
T ss_dssp GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCH-------------HHHHHHHHHCTTCCEEEEESCBCCHH
T ss_pred cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccch-------------HHHHHHHhhCCCCCeEEeeccEecHH
Confidence 3334444556788999999988542 2566665542110 00011122345666666666666554
Q ss_pred CcCccCcc--h-hhhhhccCcc-cc-ccCCCcccCCCccceeeccCCCCCCCCCc---cccccCCCccEEEecCCcCc--
Q 001908 187 LPASIGNL--S-IIYLHVGENQ-FS-GTVPPSLYNMSSLENILLDVNGFTGNLPL---DIGVTLPNLQVFAIGDNYFS-- 256 (997)
Q Consensus 187 ~p~~~~~l--~-~~~L~l~~N~-l~-g~ip~~l~~l~~L~~L~L~~N~l~g~lp~---~~~~~l~~L~~L~L~~N~l~-- 256 (997)
.+..++.. + +++|++++|. ++ ..++....++++|++|+|++|.+++.-+. .+...+++|+.|++++|.++
T Consensus 128 ~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~ 207 (592)
T 3ogk_B 128 DLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKI 207 (592)
T ss_dssp HHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSC
T ss_pred HHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCcc
Confidence 44444432 2 3344454443 11 01222234566677777777766543111 12235666666666666665
Q ss_pred --CCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccC
Q 001908 257 --GSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLG 334 (997)
Q Consensus 257 --~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 334 (997)
+.++..+.++++|++|+|++|.+.+ ++..+..+++|++|+++......... .....+..+++|+.|+++++.
T Consensus 208 ~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~---~~~~~l~~~~~L~~L~l~~~~-- 281 (592)
T 3ogk_B 208 SPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMP---EKYMNLVFPRKLCRLGLSYMG-- 281 (592)
T ss_dssp CHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCT---TSSSCCCCCTTCCEEEETTCC--
T ss_pred CHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchH---HHHHHhhccccccccCccccc--
Confidence 2334444566666666666666665 34556666666666665422211000 112234445555555554432
Q ss_pred CCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC-CCcccccccceeccccccccccchhh
Q 001908 335 GVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP-REIGQLRNLQAIGLSSNFLQGNIPSS 413 (997)
Q Consensus 335 ~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~ 413 (997)
.+.+|..+..+++|++|+|++|.+++... ..+.++++|++|+|+++...+.++..
T Consensus 282 ------------------------~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~ 337 (592)
T 3ogk_B 282 ------------------------PNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVL 337 (592)
T ss_dssp ------------------------TTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHH
T ss_pred ------------------------hhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHH
Confidence 12445556667778888888877664433 33567788888888844333344555
Q ss_pred hcCCCCCCeEEee-----------cCcCCCC-CCCCCCCCCCCcEEecCCCcccCCccccccc-ccccccccccC----C
Q 001908 414 LGNLTLMTDLFLS-----------SNHLQGN-IPPSLGNCKNLVSLNLSDNKLIGAVPQQILT-ITTLSRFLDLG----N 476 (997)
Q Consensus 414 ~~~l~~L~~L~Ls-----------~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~ll~~L~Ls----~ 476 (997)
+..+++|++|+|+ .|.+++. ++..+..+++|++|+++.|++++..+..+.. ++++ +.|+++ .
T Consensus 338 ~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L-~~L~l~~~~~~ 416 (592)
T 3ogk_B 338 AQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNL-CDFRLVLLDRE 416 (592)
T ss_dssp HHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSC-CEEEEEECSCC
T ss_pred HHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCC-cEEEEeecCCC
Confidence 5677888888888 3555532 1222345778888888888887766666665 6666 778885 6
Q ss_pred CcccCC-----Cccccccccccceeccccc--cccccccccccC-CcCccEEEccCccccc-cCChhccccCcCCeeeCc
Q 001908 477 NHLNGS-----LPLEVGNLKNLVALYISGN--QFSGEIPVTLTG-CTGLEIFHMQGNSFRG-SIPLSLRSLKSIKELDLS 547 (997)
Q Consensus 477 N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls 547 (997)
|++++. ++..+.++++|+.|+++++ .+++..+..+.. +++|+.|++++|++++ .++..+..+++|+.|+|+
T Consensus 417 n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~ 496 (592)
T 3ogk_B 417 ERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMR 496 (592)
T ss_dssp SCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEE
T ss_pred ccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeecc
Confidence 777753 3444777999999999853 477766666654 8999999999999986 345666889999999999
Q ss_pred ccccccc-CchhccCCCCCCEEeCCCCcCccc
Q 001908 548 CNNLSGQ-IPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 548 ~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
+|.+++. ++..+..+++|++|+|++|+++..
T Consensus 497 ~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 497 GCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp SCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred CCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 9998765 445557899999999999999865
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=9.1e-28 Score=287.17 Aligned_cols=268 Identities=25% Similarity=0.282 Sum_probs=148.6
Q ss_pred ccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEc
Q 001908 219 SLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDL 298 (997)
Q Consensus 219 ~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 298 (997)
+++.|++++|.++ .+|..++ ++|++|+|++|+|+ .+|. .+++|++|+|++|+|++.++ .+++|++|+|
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~L 108 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTSLPV----LPPGLLELSI 108 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSCCCC----CCTTCCEEEE
T ss_pred CCcEEEecCCCcC-ccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCcCCC----CCCCCCEEEC
Confidence 3566677777666 6666554 56666666666666 3444 45666666666666664333 4455556666
Q ss_pred cCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEecc
Q 001908 299 GINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIE 378 (997)
Q Consensus 299 s~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~ 378 (997)
++|+|+.++. .+++|+.|++++|++++ +|.. +++|++|+|+
T Consensus 109 s~N~l~~l~~----------~l~~L~~L~L~~N~l~~--------------------------lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 109 FSNPLTHLPA----------LPSGLCKLWIFGNQLTS--------------------------LPVL---PPGLQELSVS 149 (622)
T ss_dssp CSCCCCCCCC----------CCTTCCEEECCSSCCSC--------------------------CCCC---CTTCCEEECC
T ss_pred cCCcCCCCCC----------CCCCcCEEECCCCCCCc--------------------------CCCC---CCCCCEEECc
Confidence 5555554322 23444455554444442 2221 2556666666
Q ss_pred CCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCc
Q 001908 379 FNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAV 458 (997)
Q Consensus 379 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 458 (997)
+|++++ +|. .+++|+.|++++|+|++ +| ..+++|+.|+|++|+|++ +|.. +++|+.|++++|.++ .+
T Consensus 150 ~N~l~~-l~~---~~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~-~l 216 (622)
T 3g06_A 150 DNQLAS-LPA---LPSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SL 216 (622)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-SC
T ss_pred CCcCCC-cCC---ccCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCCc---cchhhEEECcCCccc-cc
Confidence 666653 232 23456666666666663 44 345666666666666663 3432 255666666666665 34
Q ss_pred ccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhcccc
Q 001908 459 PQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSL 538 (997)
Q Consensus 459 p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 538 (997)
|.. ++++ +.|+|++|+|++ +| ..+++|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+.++
T Consensus 217 ~~~---~~~L-~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l 283 (622)
T 3g06_A 217 PAL---PSGL-KELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHL 283 (622)
T ss_dssp CCC---CTTC-CEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGS
T ss_pred CCC---CCCC-CEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhc
Confidence 432 1333 555555555553 33 23455666666666665 3444 4455666666666666 555566666
Q ss_pred CcCCeeeCccccccccCchhccCCC
Q 001908 539 KSIKELDLSCNNLSGQIPEFLENLS 563 (997)
Q Consensus 539 ~~L~~L~Ls~N~l~~~~p~~~~~l~ 563 (997)
++|+.|+|++|++++.+|..+..++
T Consensus 284 ~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 284 SSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp CTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred cccCEEEecCCCCCCcCHHHHHhcc
Confidence 6666666666666666665555443
No 317
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.4e-28 Score=266.67 Aligned_cols=234 Identities=20% Similarity=0.187 Sum_probs=151.4
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccccc-ccccchhhhcCCCCCCeEEe
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNF-LQGNIPSSLGNLTLMTDLFL 425 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L 425 (997)
+++.|++++|.+++..+..|.++++|++|++++|++++..|..|.++++|++|+|++|. ++...|..|..+++|++|+|
T Consensus 33 ~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l 112 (285)
T 1ozn_A 33 ASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHL 112 (285)
T ss_dssp TCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEEC
T ss_pred CceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEEC
Confidence 34445555555554445556666666666666666666556666666666666666665 55444666666666666666
Q ss_pred ecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccc
Q 001908 426 SSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSG 505 (997)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 505 (997)
++|++++..|..|.++++|++|++++|++++..+..+..++++ +.|+|++|++++..+..|..+++|+.|++++|++++
T Consensus 113 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 191 (285)
T 1ozn_A 113 DRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNL-THLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191 (285)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCE
T ss_pred CCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCc-cEEECCCCcccccCHHHhcCccccCEEECCCCcccc
Confidence 6666666556666666666666666666664444455566666 666666666665555567777777777777777777
Q ss_pred cccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 506 EIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 506 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
..|..|.++++|+.|++++|++++..+..+..+++|+.|+|++|.+....+.. .-+..++.+..+.|.+.+..|..
T Consensus 192 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~-~~~~~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR-PLWAWLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-HHHHHHHHCCSEECCCBEEESGG
T ss_pred cCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-HHHHHHHhcccccCccccCCchH
Confidence 77777777777777888777777666666777777888888888776544321 11123445556777777777753
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=1e-29 Score=281.75 Aligned_cols=266 Identities=17% Similarity=0.143 Sum_probs=165.8
Q ss_pred eeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCc
Q 001908 222 NILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGIN 301 (997)
Q Consensus 222 ~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 301 (997)
.++++.+.+. ..+..++..+++|++|+|++|++++..|..|.++++|++|+|++|++++.++ |..+++|++|+|++|
T Consensus 14 i~~ls~~~l~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDSSLK-QALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTTTHH-HHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred Eeeccccchh-hhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 3344444443 3334444455566666666666666656666666777777777776665544 666666666666666
Q ss_pred cCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCC
Q 001908 302 NLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQ 381 (997)
Q Consensus 302 ~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 381 (997)
+++.+ ...++|++|++++|++++. .+.. +++|++|++++|+
T Consensus 91 ~l~~l-----------~~~~~L~~L~l~~n~l~~~-------------------------~~~~---~~~L~~L~l~~N~ 131 (317)
T 3o53_A 91 YVQEL-----------LVGPSIETLHAANNNISRV-------------------------SCSR---GQGKKNIYLANNK 131 (317)
T ss_dssp EEEEE-----------EECTTCCEEECCSSCCSEE-------------------------EECC---CSSCEEEECCSSC
T ss_pred ccccc-----------cCCCCcCEEECCCCccCCc-------------------------Cccc---cCCCCEEECCCCC
Confidence 65432 1235555555555555532 2222 3456666666666
Q ss_pred CCCCCCCCcccccccceeccccccccccchhhhc-CCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc
Q 001908 382 LTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLG-NLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ 460 (997)
Q Consensus 382 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 460 (997)
+++..|..|+.+++|++|+|++|++++..|..+. .+++|++|+|++|++++. |. ...+++|++|+|++|+++ .+|.
T Consensus 132 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~-~l~~ 208 (317)
T 3o53_A 132 ITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLA-FMGP 208 (317)
T ss_dssp CCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCC-EECG
T ss_pred CCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEECCCCcCC-cchh
Confidence 6666666666667777777777777665555553 567777777777777643 22 223667777777777776 3444
Q ss_pred ccccccccccccccCCCcccCCCccccccccccceecccccccc-ccccccccCCcCccEEEcc-CccccccCChh
Q 001908 461 QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFS-GEIPVTLTGCTGLEIFHMQ-GNSFRGSIPLS 534 (997)
Q Consensus 461 ~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~ 534 (997)
.+..++++ +.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|..+..+++|+.|+++ .+.++|..|..
T Consensus 209 ~~~~l~~L-~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~ 282 (317)
T 3o53_A 209 EFQSAAGV-TWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEE 282 (317)
T ss_dssp GGGGGTTC-SEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCC
T ss_pred hhcccCcc-cEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhc
Confidence 56666666 77777777777 45666777777777777777777 6677777777777777777 34566555543
No 319
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.4e-29 Score=278.85 Aligned_cols=271 Identities=20% Similarity=0.174 Sum_probs=217.3
Q ss_pred CccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCC
Q 001908 244 NLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKL 323 (997)
Q Consensus 244 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L 323 (997)
.++..+++++.+...++..+..+++|++|||++|++++..+..|+.+++|++|+|++|+++... .+..+++|
T Consensus 11 ~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~--------~~~~l~~L 82 (317)
T 3o53_A 11 RYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETL--------DLESLSTL 82 (317)
T ss_dssp EEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEE--------EETTCTTC
T ss_pred ceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcch--------hhhhcCCC
Confidence 3556677777776555566667777888888888888777777777777777777777775421 14556666
Q ss_pred cEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccc
Q 001908 324 KVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSS 403 (997)
Q Consensus 324 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 403 (997)
++|++++|+++ +.. ..++|++|++++|++++..+.. +++|++|+|++
T Consensus 83 ~~L~Ls~n~l~-------------------------~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~ 129 (317)
T 3o53_A 83 RTLDLNNNYVQ-------------------------ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLAN 129 (317)
T ss_dssp CEEECCSSEEE-------------------------EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCS
T ss_pred CEEECcCCccc-------------------------ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCC
Confidence 66666666554 222 2278999999999999776654 57899999999
Q ss_pred ccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCC-CCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCC
Q 001908 404 NFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLG-NCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGS 482 (997)
Q Consensus 404 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~ 482 (997)
|++++..|..+..+++|+.|+|++|++++..+..+. .+++|++|+|++|++++. |... .++++ +.|+|++|++++
T Consensus 130 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~-~l~~L-~~L~Ls~N~l~~- 205 (317)
T 3o53_A 130 NKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQV-VFAKL-KTLDLSSNKLAF- 205 (317)
T ss_dssp SCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCC-CCTTC-CEEECCSSCCCE-
T ss_pred CCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cccc-ccccC-CEEECCCCcCCc-
Confidence 999988888999999999999999999987777764 789999999999999844 4333 47777 999999999995
Q ss_pred CccccccccccceeccccccccccccccccCCcCccEEEccCcccc-ccCChhccccCcCCeeeCc-cccccccCchhcc
Q 001908 483 LPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFR-GSIPLSLRSLKSIKELDLS-CNNLSGQIPEFLE 560 (997)
Q Consensus 483 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls-~N~l~~~~p~~~~ 560 (997)
+|..+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+++ +.+|..+..+++|+.|+++ .+.++|..|....
T Consensus 206 l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~~~~~ 284 (317)
T 3o53_A 206 MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECT 284 (317)
T ss_dssp ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSSCCCS
T ss_pred chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCchhccC
Confidence 5556999999999999999999 68889999999999999999999 8889999999999999999 5567777665443
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=8.9e-31 Score=317.25 Aligned_cols=463 Identities=13% Similarity=0.107 Sum_probs=250.5
Q ss_pred CCeeeeeeecCCCCcEEEEeccCCCCCCccc-ccccCccccccccccccccCC---CCCcc------------CCCCCCC
Q 001908 61 LCQWAGVTCGHRHQRVTELDLRHQNIGGSLS-PYVGNLSFLRYINLATNNFHG---EIPKE------------IGFLFRL 124 (997)
Q Consensus 61 ~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~-~~l~~l~~L~~L~Ls~N~l~g---~~p~~------------~~~l~~L 124 (997)
|++|.++... ....++++... +..| ..+..+++|++|+|+++.... ..|.. ...+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 5589988322 23455665432 2333 346678899999999876432 22222 2357899
Q ss_pred eEEEccCCCccccCCcccc-CCCcccchhccccc-ccccccccccccccccceeecccccccCcCcCccCcchhhhhhcc
Q 001908 125 ETLMLANNSFSGKIPTNLS-SCSNLLSFVAYRNN-LVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNLSIIYLHVG 202 (997)
Q Consensus 125 ~~L~Ls~N~l~g~iP~~l~-~l~~L~~l~l~~n~-~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l~~~~L~l~ 202 (997)
++|+|++|.+++..+..+. ++++|++|++.+|. +...-...+...+++|++|+|++|.+++..+..+.
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~---------- 177 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLS---------- 177 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGG----------
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHH----------
Confidence 9999999999988777776 68899999988884 33322233444578888888888888765443322
Q ss_pred CccccccCCCcccCCCccceeeccCCCCCCCCCcc----ccccCCCccEEEecCC-cCcCCCCCCCCCCCCCcEEeccCc
Q 001908 203 ENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLD----IGVTLPNLQVFAIGDN-YFSGSIPESFSNASNIEIIDLPIN 277 (997)
Q Consensus 203 ~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~----~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N 277 (997)
.....+++|++|+|++|. +.++.. +...+++|++|++++| .+++ +|..+..+++|+.|+++.+
T Consensus 178 ---------~~~~~~~~L~~L~l~~~~--~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 178 ---------HFPDTYTSLVSLNISCLA--SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp ---------GSCTTCCCCCEEECTTCC--SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBC
T ss_pred ---------HHhhcCCcCcEEEecccC--CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccc
Confidence 222355667777777765 233322 2223567777777766 3333 5666666667777764333
Q ss_pred -------cCCCcccccccccCccCee-EccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccc
Q 001908 278 -------YFTGKVSIIFGRLKNLWSL-DLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMT 349 (997)
Q Consensus 278 -------~l~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~ 349 (997)
.+.+.. ..+.++++|+.| .+..... ..++..+..+++|++|++++|.+++.....+....++|+
T Consensus 246 ~~~~~~~~~~~l~-~~l~~~~~L~~Ls~~~~~~~-------~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~ 317 (594)
T 2p1m_B 246 TAEVRPDVYSGLS-VALSGCKELRCLSGFWDAVP-------AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQ 317 (594)
T ss_dssp CCCCCHHHHHHHH-HHHHTCTTCCEEECCBTCCG-------GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCC
T ss_pred cCccchhhHHHHH-HHHhcCCCcccccCCcccch-------hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcC
Confidence 333322 245556666665 2222111 112233334556666666665544222111111113333
Q ss_pred cccccCcccccc-cCCCCCCCCCCCEEecc---------CCCCCCCCCCCcc-cccccceeccccccccccchhhhc-CC
Q 001908 350 DIYMGVNQISGT-IPSGIGNLVNLNLLGIE---------FNQLTGNIPREIG-QLRNLQAIGLSSNFLQGNIPSSLG-NL 417 (997)
Q Consensus 350 ~L~l~~N~l~~~-~p~~~~~l~~L~~L~L~---------~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l 417 (997)
.|++++| ++.. ++.....+++|+.|+++ .|.+++.....+. ++++|++|+++.|.+++..+..+. .+
T Consensus 318 ~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~ 396 (594)
T 2p1m_B 318 RLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNR 396 (594)
T ss_dssp EEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHC
T ss_pred EEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhC
Confidence 3333333 2111 11111224445555442 2233221111111 244444444444444443333332 24
Q ss_pred CCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccC-----CcccccccccccccccccCCCcccCCCcccccc-cc
Q 001908 418 TLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIG-----AVPQQILTITTLSRFLDLGNNHLNGSLPLEVGN-LK 491 (997)
Q Consensus 418 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~-l~ 491 (997)
++|+.|+|+.|...+ -|.+++ .++..+..++++ +.|+|++ .+++..+..+.. ++
T Consensus 397 ~~L~~L~L~~~~~~~------------------~~~l~~~~~~~~~~~l~~~~~~L-~~L~L~~-~l~~~~~~~l~~~~~ 456 (594)
T 2p1m_B 397 PNMTRFRLCIIEPKA------------------PDYLTLEPLDIGFGAIVEHCKDL-RRLSLSG-LLTDKVFEYIGTYAK 456 (594)
T ss_dssp TTCCEEEEEESSTTC------------------CCTTTCCCTHHHHHHHHHHCTTC-CEEECCS-SCCHHHHHHHHHHCT
T ss_pred CCcceeEeecccCCC------------------cccccCCchhhHHHHHHhhCCCc-cEEeecC-cccHHHHHHHHHhch
Confidence 444444444110000 023321 111123344455 5666655 444444444444 67
Q ss_pred ccceeccccccccccccccc-cCCcCccEEEccCccccccCCh-hccccCcCCeeeCccccccccCchhc-cCCCCCCEE
Q 001908 492 NLVALYISGNQFSGEIPVTL-TGCTGLEIFHMQGNSFRGSIPL-SLRSLKSIKELDLSCNNLSGQIPEFL-ENLSFLEYL 568 (997)
Q Consensus 492 ~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L 568 (997)
+|+.|+|++|.+++..+..+ .++++|+.|+|++|.+++.... ....+++|+.|++++|+++......+ ..++.|+..
T Consensus 457 ~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~~lp~l~i~ 536 (594)
T 2p1m_B 457 KMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSVSFGACKLLGQKMPKLNVE 536 (594)
T ss_dssp TCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCBHHHHHHHHHHCTTEEEE
T ss_pred hccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCCHHHHHHHHHhCCCCEEE
Confidence 88888888888876666555 6688899999999988655444 34458899999999998864444444 567788777
Q ss_pred eCCCCcCcccCC
Q 001908 569 NLSYNHFDGEVP 580 (997)
Q Consensus 569 ~ls~N~l~~~~p 580 (997)
.+..+.-....|
T Consensus 537 ~~~~~~~~~~~~ 548 (594)
T 2p1m_B 537 VIDERGAPDSRP 548 (594)
T ss_dssp EECSSSCGGGSC
T ss_pred EecCCCcccccc
Confidence 777665544333
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.5e-28 Score=286.71 Aligned_cols=186 Identities=16% Similarity=0.043 Sum_probs=130.3
Q ss_pred cccccCcceEEEEEECCCCcEEEEEEeccc----------chhhHHHHHHHHHHHhhc-CCCCcceEEeeeeccCcCCCc
Q 001908 686 MIGQGSFGSVYKGILGENGTFVAVKILNLM----------QKGALKSFVAECEVLRNT-RHRNLIKIITVCSSIDFKGAD 754 (997)
Q Consensus 686 ~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~l-~h~niv~l~~~~~~~~~~~~~ 754 (997)
..+.|+.|.+..++..-.|+.||+|++... .+...+++.+|+++|+++ .|+||++++++ ++++.
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~-----~ed~~ 315 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAH-----GENAQ 315 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEE-----EECSS
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEE-----EEECC
Confidence 456677776666666557889999999632 123346799999999999 79999999999 56677
Q ss_pred eEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEccc
Q 001908 755 FKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDF 834 (997)
Q Consensus 755 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DF 834 (997)
..||||||++|++|.+++.+.. +++.. +|+.||+.||+|+|++ |||||||||+|||++.+|++||+||
T Consensus 316 ~~yLVMEyv~G~~L~d~i~~~~------~l~~~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DF 383 (569)
T 4azs_A 316 SGWLVMEKLPGRLLSDMLAAGE------EIDRE---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDF 383 (569)
T ss_dssp EEEEEEECCCSEEHHHHHHTTC------CCCHH---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCC
T ss_pred EEEEEEecCCCCcHHHHHHhCC------CCCHH---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeec
Confidence 9999999999999999998765 34443 5889999999999999 9999999999999999999999999
Q ss_pred ccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 835 GLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 835 g~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
|+|+..... .......+||+.|||||++. +.+..++|+||+|++++++.++..|
T Consensus 384 GlAr~~~~~--------~~~~~t~vGTp~YmAPE~l~-------------g~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 384 GSIVTTPQD--------CSWPTNLVQSFFVFVNELFA-------------ENKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp TTEESCC-----------CCSHHHHHHHHHHHHHHC------------------------------CCCCTTHHH
T ss_pred ccCeeCCCC--------CccccCceechhhccHHHhC-------------CCCCCcccccccccchhhhccccch
Confidence 999865221 12234468999999998764 3456789999999998888766544
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=6.1e-27 Score=274.69 Aligned_cols=227 Identities=21% Similarity=0.184 Sum_probs=199.8
Q ss_pred CCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCC
Q 001908 363 PSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCK 442 (997)
Q Consensus 363 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 442 (997)
......+++|+.|+|++|++++..|..|+++++|++|+|++|.+++.+| +..+++|++|+|++|.|++..+ .+
T Consensus 27 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~ 99 (487)
T 3oja_A 27 ASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GP 99 (487)
T ss_dssp HTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CT
T ss_pred HHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CC
Confidence 3334456699999999999999889999999999999999999998766 9999999999999999996433 38
Q ss_pred CCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccccccccc-CCcCccEEE
Q 001908 443 NLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT-GCTGLEIFH 521 (997)
Q Consensus 443 ~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~ 521 (997)
+|++|++++|.+++..+.. ++++ +.|+|++|.+++..|..|+++++|+.|+|++|.+++.+|..+. .+++|+.|+
T Consensus 100 ~L~~L~L~~N~l~~~~~~~---l~~L-~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~ 175 (487)
T 3oja_A 100 SIETLHAANNNISRVSCSR---GQGK-KNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLN 175 (487)
T ss_dssp TCCEEECCSSCCCCEEECC---CSSC-EEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEE
T ss_pred CcCEEECcCCcCCCCCccc---cCCC-CEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEe
Confidence 9999999999999766543 4566 8999999999999999999999999999999999998998887 799999999
Q ss_pred ccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCC
Q 001908 522 MQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCG 601 (997)
Q Consensus 522 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~ 601 (997)
|++|.|++..+ +..+++|+.|+|++|+|++. |..+..+++|+.|+|++|.+++.++....++++..+++.+|++.|+
T Consensus 176 Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 176 LQYNFIYDVKG--QVVFAKLKTLDLSSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CTTSCCCEEEC--CCCCTTCCEEECCSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cCCCccccccc--cccCCCCCEEECCCCCCCCC-CHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 99999997633 34699999999999999975 4459999999999999999998666667778999999999999997
Q ss_pred CC
Q 001908 602 GS 603 (997)
Q Consensus 602 ~~ 603 (997)
+.
T Consensus 253 ~~ 254 (487)
T 3oja_A 253 TL 254 (487)
T ss_dssp HH
T ss_pred ch
Confidence 53
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.6e-26 Score=247.11 Aligned_cols=215 Identities=19% Similarity=0.283 Sum_probs=135.6
Q ss_pred CCCCeeeeeeecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCCeEEEccCCCccccC
Q 001908 59 INLCQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKI 138 (997)
Q Consensus 59 ~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 138 (997)
.++|.|.|+.|.- ...++.+++++++++ .+|..+. +.|++|+|++|++++..|..|+.+++|++|+|++|.++ .+
T Consensus 2 ~~~C~~~~~~C~c-~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~i 76 (270)
T 2o6q_A 2 EALCKKDGGVCSC-NNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ-TL 76 (270)
T ss_dssp CCCBGGGTCSBEE-ETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS-CC
T ss_pred CccCCCCCCCCEe-CCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC-ee
Confidence 4799999999863 345678999999997 4776665 68999999999999766678999999999999999998 45
Q ss_pred Ccc-ccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcc-hhhhhhccCccccccCCCcccC
Q 001908 139 PTN-LSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGENQFSGTVPPSLYN 216 (997)
Q Consensus 139 P~~-l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~~~L~l~~N~l~g~ip~~l~~ 216 (997)
|.. +.++++|+ +|+|++|++++..+..++.+ ++.+|++++|++++..|..|.+
T Consensus 77 ~~~~~~~l~~L~-------------------------~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 131 (270)
T 2o6q_A 77 PAGIFKELKNLE-------------------------TLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDS 131 (270)
T ss_dssp CTTTTSSCTTCC-------------------------EEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTT
T ss_pred ChhhhcCCCCCC-------------------------EEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCc
Confidence 543 35555555 55555555543333333322 1223333333333333444555
Q ss_pred CCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCee
Q 001908 217 MSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSL 296 (997)
Q Consensus 217 l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 296 (997)
+++|++|+|++|+++ .+|...+..+++|++|+|++|++++..+..|..+++|++|+|++|++++.++..|..+++|+.|
T Consensus 132 l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 210 (270)
T 2o6q_A 132 LTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKML 210 (270)
T ss_dssp CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEE
T ss_pred CcCCCEEECCCCcCC-ccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEE
Confidence 566666666666665 4554444455666666666666665555556666666666666666665555555555555555
Q ss_pred EccCccCC
Q 001908 297 DLGINNLG 304 (997)
Q Consensus 297 ~Ls~N~l~ 304 (997)
+|++|.+.
T Consensus 211 ~l~~N~~~ 218 (270)
T 2o6q_A 211 QLQENPWD 218 (270)
T ss_dssp ECCSSCBC
T ss_pred EecCCCee
Confidence 55555554
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.1e-26 Score=247.67 Aligned_cols=210 Identities=22% Similarity=0.221 Sum_probs=135.1
Q ss_pred CCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecC
Q 001908 371 NLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLS 450 (997)
Q Consensus 371 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (997)
+|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555555555554444455555555555555555554444455555555555555555554444555555555555555
Q ss_pred CCcccCCcccccccccccccccccCCCcccCC-CccccccccccceeccccccccccccccccCCcCcc----EEEccCc
Q 001908 451 DNKLIGAVPQQILTITTLSRFLDLGNNHLNGS-LPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLE----IFHMQGN 525 (997)
Q Consensus 451 ~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N 525 (997)
+|++.+..+..+..++++ +.|++++|++++. +|..|.++++|+.|++++|++++..+..+..+.+|+ .|++++|
T Consensus 109 ~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n 187 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTL-KELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (276)
T ss_dssp TSCCCCSTTCCCTTCTTC-CEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSS
T ss_pred CCCccccCchhcccCCCC-CEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCC
Confidence 555554444345555555 5555555555542 466777777788888888887766666776666666 7888888
Q ss_pred cccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 526 SFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
++++..+..+. ..+|+.|+|++|++++..+..+..+++|+.|+|++|++++.+|..
T Consensus 188 ~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 188 PMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp CCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred cccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCch
Confidence 88865554444 447899999999998776777888999999999999999888754
No 325
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=2.9e-25 Score=240.90 Aligned_cols=209 Identities=17% Similarity=0.199 Sum_probs=181.6
Q ss_pred cccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEe
Q 001908 346 TTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFL 425 (997)
Q Consensus 346 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 425 (997)
++++.|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 28 ~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 107 (276)
T 2z62_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (276)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEEC
Confidence 46777888888888777778889999999999999999888888999999999999999999887888999999999999
Q ss_pred ecCcCCCCCCCCCCCCCCCcEEecCCCcccCC-cccccccccccccccccCCCcccCCCccccccccccc----eecccc
Q 001908 426 SSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGA-VPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLV----ALYISG 500 (997)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~ 500 (997)
++|++++..+..+.++++|++|++++|++++. +|..+..++++ +.|+|++|++++..+..+..+++|+ .|++++
T Consensus 108 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNL-EHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTC-CEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCC-CEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 99999987777899999999999999999863 68889999888 8999999999988888888888887 899999
Q ss_pred ccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCc
Q 001908 501 NQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIP 556 (997)
Q Consensus 501 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 556 (997)
|++++..+..+. ..+|+.|+|++|++++..+..|..+++|+.|+|++|++++..|
T Consensus 187 n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CcccccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 999965555554 4589999999999997777778999999999999999997544
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=1.3e-24 Score=234.80 Aligned_cols=205 Identities=24% Similarity=0.249 Sum_probs=126.4
Q ss_pred CCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC
Q 001908 372 LNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 372 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (997)
.+.+++++|+++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|+++...+..|.++++|++|+|++
T Consensus 18 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~ 94 (270)
T 2o6q_A 18 KNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTD 94 (270)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCS
T ss_pred CCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCC
Confidence 445555555555 2443332 3455555555555544444555555566666666655544444455555666666666
Q ss_pred CcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccC
Q 001908 452 NKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI 531 (997)
Q Consensus 452 N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (997)
|++++..+..+..+++| ++|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|++|++++..
T Consensus 95 n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 95 NKLQALPIGVFDQLVNL-AELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SCCCCCCTTTTTTCSSC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CcCCcCCHhHcccccCC-CEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 55553333334444444 55555555555555556667777777777777777555555777777777777777777666
Q ss_pred ChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 532 PLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
+..|..+++|+.|+|++|++++..+..+..+++|+.|+|++|++++..+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 6667777777777777777776656667777777777777777766554
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=4.1e-25 Score=240.96 Aligned_cols=204 Identities=25% Similarity=0.259 Sum_probs=135.3
Q ss_pred CCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCc
Q 001908 366 IGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLV 445 (997)
Q Consensus 366 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 445 (997)
+.++++++.+++++|+++ .+|..+. +++++|+|++|++++..|..|.++++|+.|+|++|+|++..+ . ..+++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~-~-~~l~~L~ 80 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV-D-GTLPVLG 80 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC-C-SCCTTCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC-C-CCCCcCC
Confidence 567888999999999998 4565553 678899999999988888889999999999999999885433 2 6788888
Q ss_pred EEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCc
Q 001908 446 SLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGN 525 (997)
Q Consensus 446 ~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (997)
+|+|++|+++ .+|..+..++++ ++|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|+|++|
T Consensus 81 ~L~Ls~N~l~-~l~~~~~~l~~L-~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 81 TLDLSHNQLQ-SLPLLGQTLPAL-TVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp EEECCSSCCS-SCCCCTTTCTTC-CEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred EEECCCCcCC-cCchhhccCCCC-CEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 8888888876 566655555555 56666666666555555556666666666666665444445555555555555555
Q ss_pred cccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcc
Q 001908 526 SFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 577 (997)
+|++..+..|..+++|+.|+|++|+|+ .+|..+..+.+|+.|+|++|++.+
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 555444444555555555555555555 445444444555555555555443
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=1.5e-24 Score=236.50 Aligned_cols=206 Identities=26% Similarity=0.234 Sum_probs=157.8
Q ss_pred cccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccc
Q 001908 390 IGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLS 469 (997)
Q Consensus 390 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll 469 (997)
+.++++|+++++++|.++ .+|..+. ++++.|+|++|++++..|..|.++++|++|+|++|.+++ +|.. ..++++
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~-~~l~~L- 79 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK-LQVD-GTLPVL- 79 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE-EECC-SCCTTC-
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc-ccCC-CCCCcC-
Confidence 566777888888888887 5665554 678888888888887777778888888888888888874 3333 566666
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.|+|++|+++ .+|..+..+++|++|+|++|++++..|..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 80 ~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 158 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANN 158 (290)
T ss_dssp CEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCC
Confidence 78888888887 67777788888888888888888666677888888888888888888766777778888888888888
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
+|++..+..|..+++|++|+|++|+++..++.......++.+.+.+|||.|.|
T Consensus 159 ~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 159 NLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSG
T ss_pred cCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcC
Confidence 88866666677788888888888888855444455566778888888888865
No 329
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=2.4e-28 Score=295.94 Aligned_cols=214 Identities=13% Similarity=0.077 Sum_probs=155.0
Q ss_pred ccCCCCCCCCCCCEEeccCCCCCCCCCC-Ccccccccceecccccccccc-chhhhcCCCCCCeEEeec---------Cc
Q 001908 361 TIPSGIGNLVNLNLLGIEFNQLTGNIPR-EIGQLRNLQAIGLSSNFLQGN-IPSSLGNLTLMTDLFLSS---------NH 429 (997)
Q Consensus 361 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~---------N~ 429 (997)
.++..+..+++|+.|+|++|.+++.... .+..+++|++|++++| ++.. ++.....+++|+.|+|++ |.
T Consensus 280 ~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~ 358 (594)
T 2p1m_B 280 YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVA 358 (594)
T ss_dssp GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSC
T ss_pred hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCC
Confidence 3444445678899999998887643322 2557888999999988 4422 333344588899999844 44
Q ss_pred CCCCCCCCCC-CCCCCcEEecCCCcccCCcccccc-cccccccccccC--C----CcccCC-----Ccccccccccccee
Q 001908 430 LQGNIPPSLG-NCKNLVSLNLSDNKLIGAVPQQIL-TITTLSRFLDLG--N----NHLNGS-----LPLEVGNLKNLVAL 496 (997)
Q Consensus 430 l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~-~l~~ll~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L 496 (997)
+++.....+. ++++|++|+++.|.+++..+..+. .++++ +.|+++ + |.+++. ++..+..+++|+.|
T Consensus 359 l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L-~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L 437 (594)
T 2p1m_B 359 LTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNM-TRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRL 437 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTC-CEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEE
T ss_pred CCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCc-ceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEE
Confidence 4432222222 378899998888888766666555 46677 888988 4 566632 12236778999999
Q ss_pred ccccccccccccccccC-CcCccEEEccCccccccCChhc-cccCcCCeeeCccccccccCch-hccCCCCCCEEeCCCC
Q 001908 497 YISGNQFSGEIPVTLTG-CTGLEIFHMQGNSFRGSIPLSL-RSLKSIKELDLSCNNLSGQIPE-FLENLSFLEYLNLSYN 573 (997)
Q Consensus 497 ~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ls~N 573 (997)
+|++ .+++..+..+.. +++|+.|+|++|.+++..+..+ ..+++|+.|+|++|.+++..+. ....+++|++|++++|
T Consensus 438 ~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 438 SLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp ECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred eecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 9988 777776667766 8999999999999987666666 6799999999999999765544 4456899999999999
Q ss_pred cCcc
Q 001908 574 HFDG 577 (997)
Q Consensus 574 ~l~~ 577 (997)
+++.
T Consensus 517 ~~~~ 520 (594)
T 2p1m_B 517 SVSF 520 (594)
T ss_dssp CCBH
T ss_pred CCCH
Confidence 9853
No 330
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.5e-24 Score=234.56 Aligned_cols=91 Identities=31% Similarity=0.260 Sum_probs=39.6
Q ss_pred CCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCC
Q 001908 365 GIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNL 444 (997)
Q Consensus 365 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 444 (997)
.|.++++|++|+|++|++++..+..|+++++|++|+|++|++++..+..+..+++|+.|+|++|++++..+..|.++++|
T Consensus 104 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 183 (272)
T 3rfs_A 104 VFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQL 183 (272)
T ss_dssp TTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccC
Confidence 33444444444444444444433344444444444444444443333334444444444444444444333334444444
Q ss_pred cEEecCCCccc
Q 001908 445 VSLNLSDNKLI 455 (997)
Q Consensus 445 ~~L~L~~N~l~ 455 (997)
++|++++|+++
T Consensus 184 ~~L~L~~N~l~ 194 (272)
T 3rfs_A 184 KDLRLYQNQLK 194 (272)
T ss_dssp CEEECCSSCCS
T ss_pred CEEECCCCcCC
Confidence 44444444444
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.9e-25 Score=236.78 Aligned_cols=222 Identities=22% Similarity=0.223 Sum_probs=189.6
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEee
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (997)
.+..+.+..+.+... ..+..+++|+.|++++|.++. + ..+..+++|++|+|++|++++ + ..+..+++|++|+|+
T Consensus 20 ~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~ 93 (272)
T 3rfs_A 20 ETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILT 93 (272)
T ss_dssp HHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECT
T ss_pred HHHHHHhcCcccccc--cccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECC
Confidence 355566666666543 335678889999999999874 3 358889999999999999986 3 478899999999999
Q ss_pred cCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccc
Q 001908 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE 506 (997)
Q Consensus 427 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 506 (997)
+|++++..+..|.++++|++|+|++|++++..|..+..++++ ++|++++|++++..+..|+.+++|+.|++++|++++.
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNL-TYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTC-CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCC-CEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 999998888888999999999999999987777778888888 8999999999987777889999999999999999987
Q ss_pred ccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 507 IPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
.+..|..+++|+.|++++|++++..|..+..+++|+.|+|++|.+.+. ++.|+.|+++.|.++|.+|..
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCT
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCc
Confidence 777889999999999999999988888899999999999999998865 457889999999999999865
No 332
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=5.8e-24 Score=234.78 Aligned_cols=202 Identities=20% Similarity=0.190 Sum_probs=165.1
Q ss_pred CCCCCEEeccCCCCCCCCCCCc--ccccccceeccccccccccch----hhhcCCCCCCeEEeecCcCCCCCCCCCCCCC
Q 001908 369 LVNLNLLGIEFNQLTGNIPREI--GQLRNLQAIGLSSNFLQGNIP----SSLGNLTLMTDLFLSSNHLQGNIPPSLGNCK 442 (997)
Q Consensus 369 l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 442 (997)
+++|++|++++|++++..|..+ ..+++|++|+|++|++++..| ..+..+++|++|+|++|++++..|..|.+++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~ 169 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFP 169 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCT
T ss_pred cCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCC
Confidence 3568889999999988888887 888999999999999987544 4556789999999999999988889999999
Q ss_pred CCcEEecCCCcccCC--cc--cccccccccccccccCCCcccCCCcc----ccccccccceeccccccccccccccccCC
Q 001908 443 NLVSLNLSDNKLIGA--VP--QQILTITTLSRFLDLGNNHLNGSLPL----EVGNLKNLVALYISGNQFSGEIPVTLTGC 514 (997)
Q Consensus 443 ~L~~L~L~~N~l~~~--~p--~~~~~l~~ll~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 514 (997)
+|++|+|++|++.+. ++ ..+..++++ ++|+|++|+++ .+|. .++.+++|++|||++|++++..|..+..+
T Consensus 170 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 170 ALTSLDLSDNPGLGERGLMAALCPHKFPAI-QNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TCCEEECCSCTTCHHHHHHTTSCTTSSCCC-CSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCEEECCCCCCccchhhhHHHhhhcCCCC-CEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999998653 22 223567777 88999999987 3333 25678899999999999998878877776
Q ss_pred ---cCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcc
Q 001908 515 ---TGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 515 ---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 577 (997)
++|++|+|++|+|+ .+|..+. ++|+.|||++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 69999999999998 6777764 7999999999999864 43 6788899999999999874
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=8.9e-26 Score=255.05 Aligned_cols=233 Identities=18% Similarity=0.202 Sum_probs=131.6
Q ss_pred hhccCccccccCCCcccCCCccceeeccCCCCCCCCCc----cccccCC-CccEEEecCCcCcCCCCCCCCCC-----CC
Q 001908 199 LHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPL----DIGVTLP-NLQVFAIGDNYFSGSIPESFSNA-----SN 268 (997)
Q Consensus 199 L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 268 (997)
+.++.|+++|.+|..+...++|++|+|++|.+++ ++. ..+..++ +|++|+|++|++++..+..|..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~-~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYS-ISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGG-SCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCCh-HHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 4577788887777777776777777777777763 333 3333555 67777777777766666555554 66
Q ss_pred CcEEeccCccCCCccccccccc-----CccCeeEccCccCCCCCCCCcchhhhhcc-CCCCcEEEeecCccCCCCccccc
Q 001908 269 IEIIDLPINYFTGKVSIIFGRL-----KNLWSLDLGINNLGSGGANDLDFVTILTN-CSKLKVLAFEENRLGGVLPHSIA 342 (997)
Q Consensus 269 L~~L~Ls~N~l~~~~~~~~~~l-----~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~-l~~L~~L~L~~N~l~~~~p~~~~ 342 (997)
|++|+|++|++++..+..+... ++|++|+|++|+++..+.. .+...+.. .++|++|+|++|++++..+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l- 158 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSS--EFKQAFSNLPASITSLNLRGNDLGIKSSDEL- 158 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHH--HHHHHHTTSCTTCCEEECTTSCGGGSCHHHH-
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHH--HHHHHHHhCCCceeEEEccCCcCCHHHHHHH-
Confidence 6666666666666555543332 5555555555555443221 11122223 2355555555555443222211
Q ss_pred ccccccccccccCcccccccCCCCCCCC-CCCEEeccCCCCCCCCCCCcccc-----cccceecccccccccc----chh
Q 001908 343 NLSTTMTDIYMGVNQISGTIPSGIGNLV-NLNLLGIEFNQLTGNIPREIGQL-----RNLQAIGLSSNFLQGN----IPS 412 (997)
Q Consensus 343 ~l~~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~ 412 (997)
+..+..++ +|++|+|++|++++..+..+... ++|++|+|++|.|++. ++.
T Consensus 159 --------------------~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~ 218 (362)
T 3goz_A 159 --------------------IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAY 218 (362)
T ss_dssp --------------------HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred --------------------HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHH
Confidence 12222333 67777777777765555444332 4677777777776642 444
Q ss_pred hhcC-CCCCCeEEeecCcCCCCCC----CCCCCCCCCcEEecCCCccc
Q 001908 413 SLGN-LTLMTDLFLSSNHLQGNIP----PSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 413 ~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~ 455 (997)
.+.. .++|+.|+|++|++++..+ ..+..+++|++|+|++|.+.
T Consensus 219 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~ 266 (362)
T 3goz_A 219 IFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVK 266 (362)
T ss_dssp HHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHT
T ss_pred HHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCcc
Confidence 4544 3467777777777665433 23455566666666666654
No 334
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.1e-25 Score=256.93 Aligned_cols=193 Identities=17% Similarity=0.204 Sum_probs=122.5
Q ss_pred CCCCCCCEEeccCCCCCC----CCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCC-
Q 001908 367 GNLVNLNLLGIEFNQLTG----NIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNC- 441 (997)
Q Consensus 367 ~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l- 441 (997)
..+++|++|+|++|++++ .+|..+..+++|++|+|++|.+++..+..+... +..+
T Consensus 91 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~--------------------l~~l~ 150 (386)
T 2ca6_A 91 LKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARA--------------------LQELA 150 (386)
T ss_dssp TTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHH--------------------HHHHH
T ss_pred hhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHH--------------------HHHHh
Confidence 445555555555555554 244445555555555555555543322222221 1111
Q ss_pred --------CCCcEEecCCCccc-CCcc---cccccccccccccccCCCccc--C---CCccccccccccceecccccccc
Q 001908 442 --------KNLVSLNLSDNKLI-GAVP---QQILTITTLSRFLDLGNNHLN--G---SLPLEVGNLKNLVALYISGNQFS 504 (997)
Q Consensus 442 --------~~L~~L~L~~N~l~-~~~p---~~~~~l~~ll~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~ 504 (997)
++|++|+|++|+++ +.+| ..+..++++ +.|+|++|+++ | ..|..+..+++|+.|+|++|.++
T Consensus 151 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L-~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 151 VNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL-HTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp HHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTC-CEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred hhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCc-CEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 45555555555554 2233 233344444 55555555554 1 23446777888888888888886
Q ss_pred ----ccccccccCCcCccEEEccCcccccc----CChhccc--cCcCCeeeCccccccc----cCchhc-cCCCCCCEEe
Q 001908 505 ----GEIPVTLTGCTGLEIFHMQGNSFRGS----IPLSLRS--LKSIKELDLSCNNLSG----QIPEFL-ENLSFLEYLN 569 (997)
Q Consensus 505 ----~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~--l~~L~~L~Ls~N~l~~----~~p~~~-~~l~~L~~L~ 569 (997)
+.+|..+..+++|+.|+|++|++++. +|..+.. +++|+.|+|++|++++ .+|..+ .++++|++|+
T Consensus 230 ~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~ 309 (386)
T 2ca6_A 230 HLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 309 (386)
T ss_dssp HHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEE
T ss_pred cHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEE
Confidence 56788888888899999999988865 5666633 8889999999999987 477777 6689999999
Q ss_pred CCCCcCcccCC
Q 001908 570 LSYNHFDGEVP 580 (997)
Q Consensus 570 ls~N~l~~~~p 580 (997)
|++|++++..+
T Consensus 310 l~~N~l~~~~~ 320 (386)
T 2ca6_A 310 LNGNRFSEEDD 320 (386)
T ss_dssp CTTSBSCTTSH
T ss_pred ccCCcCCcchh
Confidence 99999986654
No 335
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=1.3e-23 Score=222.74 Aligned_cols=196 Identities=18% Similarity=0.157 Sum_probs=103.4
Q ss_pred CCCEEeccCCCCCCCCCCCcccccccceecccccc-ccccchhhhcCCCCCCeEEeec-CcCCCCCCCCCCCCCCCcEEe
Q 001908 371 NLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNF-LQGNIPSSLGNLTLMTDLFLSS-NHLQGNIPPSLGNCKNLVSLN 448 (997)
Q Consensus 371 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~ 448 (997)
+|++|++++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 45555555555554444455555555555555554 4433334455555555555555 555544444555555555555
Q ss_pred cCCCcccCCccccccccccccc---ccccCCC-cccCCCccccccccccc-eeccccccccccccccccCCcCccEEEcc
Q 001908 449 LSDNKLIGAVPQQILTITTLSR---FLDLGNN-HLNGSLPLEVGNLKNLV-ALYISGNQFSGEIPVTLTGCTGLEIFHMQ 523 (997)
Q Consensus 449 L~~N~l~~~~p~~~~~l~~ll~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 523 (997)
+++|++++ +|. +..+.++ + .|++++| ++++..+..|.++++|+ .|++++|+++ .+|......++|+.|+|+
T Consensus 112 l~~n~l~~-lp~-~~~l~~L-~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYST-DIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBC-CSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred CCCCCCcc-ccc-ccccccc-ccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 55555542 333 3333333 2 4444444 44444444556666666 6666666666 344332222566666666
Q ss_pred Ccc-ccccCChhcccc-CcCCeeeCccccccccCchhccCCCCCCEEeCCCC
Q 001908 524 GNS-FRGSIPLSLRSL-KSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYN 573 (997)
Q Consensus 524 ~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 573 (997)
+|+ +++..+..|..+ ++|+.|||++|+|++ +|.. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 663 665555566666 666666666666663 3332 4556666666554
No 336
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=2.4e-25 Score=249.10 Aligned_cols=271 Identities=15% Similarity=0.172 Sum_probs=191.6
Q ss_pred CCCCeeeeeeecCCCCcEEEEeccCCCCCCcccccccCc--cccccccccccccCCCCCccCCCCCCCeEEEccCCCccc
Q 001908 59 INLCQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNL--SFLRYINLATNNFHGEIPKEIGFLFRLETLMLANNSFSG 136 (997)
Q Consensus 59 ~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 136 (997)
.-|.+|.++.|+. ..++.+|++++.+. +..++.+ +++++|++++|.+.+..|. +..+++|++|+|++|.+++
T Consensus 34 ~vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~ 107 (336)
T 2ast_B 34 GVCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEV 107 (336)
T ss_dssp SSCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECH
T ss_pred HHHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCH
Confidence 3466899999864 35789999999886 5667777 8999999999999977665 6689999999999999987
Q ss_pred c-CCccccCCCcccchhcccccccccccccccccccccceeecccc-cccCcCcCccCcchhhhhhccCccccccCCCcc
Q 001908 137 K-IPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARN-HLTGMLPASIGNLSIIYLHVGENQFSGTVPPSL 214 (997)
Q Consensus 137 ~-iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N-~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l 214 (997)
. +|..+.++++|++|++++|++.+.+|..+.. +++|++|+|++| .+++. .+|..+
T Consensus 108 ~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~----------------------~l~~~~ 164 (336)
T 2ast_B 108 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEF----------------------ALQTLL 164 (336)
T ss_dssp HHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHH----------------------HHHHHH
T ss_pred HHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHH----------------------HHHHHH
Confidence 6 8888888888888888888777777766653 677777777777 45431 134445
Q ss_pred cCCCccceeeccCC-CCCCC-CCccccccCC-CccEEEecCC--cCc-CCCCCCCCCCCCCcEEeccCcc-CCCcccccc
Q 001908 215 YNMSSLENILLDVN-GFTGN-LPLDIGVTLP-NLQVFAIGDN--YFS-GSIPESFSNASNIEIIDLPINY-FTGKVSIIF 287 (997)
Q Consensus 215 ~~l~~L~~L~L~~N-~l~g~-lp~~~~~~l~-~L~~L~L~~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~~~~~ 287 (997)
.++++|++|+|++| .+++. +|..+ ..++ +|++|++++| .++ +.+|..+.++++|++|+|++|. +++..+..+
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~-~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l 243 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAV-AHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEF 243 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHH-HHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGG
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHH-HhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHH
Confidence 56677777777777 77643 34333 3677 7777777777 454 4566667777888888888887 676667777
Q ss_pred cccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCC
Q 001908 288 GRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIG 367 (997)
Q Consensus 288 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~ 367 (997)
..+++|++|++++|. .+.. .....+.++++|++|++++| ++ ...+..+...+..|++++|++++..|..++
T Consensus 244 ~~l~~L~~L~l~~~~--~~~~---~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 244 FQLNYLQHLSLSRCY--DIIP---ETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGCTTCCEEECTTCT--TCCG---GGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred hCCCCCCEeeCCCCC--CCCH---HHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 788888888888875 1111 11235667888888888877 32 223333333455666666666666665554
Q ss_pred C
Q 001908 368 N 368 (997)
Q Consensus 368 ~ 368 (997)
+
T Consensus 315 ~ 315 (336)
T 2ast_B 315 N 315 (336)
T ss_dssp S
T ss_pred c
Confidence 3
No 337
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.6e-25 Score=249.25 Aligned_cols=252 Identities=17% Similarity=0.171 Sum_probs=168.0
Q ss_pred EeecCccCCCCcccccccccccccccccCcccccccC----CCCCCCC-CCCEEeccCCCCCCCCCCCcccc-----ccc
Q 001908 327 AFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIP----SGIGNLV-NLNLLGIEFNQLTGNIPREIGQL-----RNL 396 (997)
Q Consensus 327 ~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L 396 (997)
++++|.++|.+|..+... .+|+.|++++|.|++..+ ..|.+++ +|++|+|++|++++..+..|..+ ++|
T Consensus 4 ~ls~n~~~~~~~~~~~~~-~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIP-HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp ECCCCTTCCHHHHHHTSC-TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred ccccccchHHHHHHHhCC-CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 344444444444333222 335555555555544444 4555666 78888888888877767666665 778
Q ss_pred ceeccccccccccchhhhc----CC-CCCCeEEeecCcCCCCCCCCC----CC-CCCCcEEecCCCcccCCccc----cc
Q 001908 397 QAIGLSSNFLQGNIPSSLG----NL-TLMTDLFLSSNHLQGNIPPSL----GN-CKNLVSLNLSDNKLIGAVPQ----QI 462 (997)
Q Consensus 397 ~~L~Ls~N~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p~----~~ 462 (997)
++|+|++|++++..+..+. .+ ++|+.|+|++|++++..+..+ .. .++|++|+|++|++++..+. .+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l 162 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQIL 162 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHH
T ss_pred cEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHH
Confidence 8888888888776666443 33 788888888888876555433 33 35788888888888754333 33
Q ss_pred cccc-ccccccccCCCcccCCCccccccc-----cccceecccccccccc----ccccccC-CcCccEEEccCccccccC
Q 001908 463 LTIT-TLSRFLDLGNNHLNGSLPLEVGNL-----KNLVALYISGNQFSGE----IPVTLTG-CTGLEIFHMQGNSFRGSI 531 (997)
Q Consensus 463 ~~l~-~ll~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 531 (997)
...+ ++ +.|+|++|++++..+..+... ++|+.|||++|++++. ++..+.. .++|+.|+|++|++++..
T Consensus 163 ~~~~~~L-~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 163 AAIPANV-NSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HTSCTTC-CEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred hcCCccc-cEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 4444 55 788888888887766555433 5888999999988753 4555655 358999999999888655
Q ss_pred C----hhccccCcCCeeeCccccccccC-------chhccCCCCCCEEeCCCCcCcccCC
Q 001908 532 P----LSLRSLKSIKELDLSCNNLSGQI-------PEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 532 p----~~~~~l~~L~~L~Ls~N~l~~~~-------p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
+ ..+..+++|+.|+|++|++.+.. +..+..+++|+.||+++|++....+
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~ 301 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHS 301 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGC
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcch
Confidence 4 33466788999999999855433 3356778888999999999876533
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.7e-25 Score=255.27 Aligned_cols=257 Identities=18% Similarity=0.223 Sum_probs=158.9
Q ss_pred CCCCCCCCCCCCcEEeccCccCCCcccc----cccccCccCeeEccCccCCCCCCC----CcchhhhhccCCCCcEEEee
Q 001908 258 SIPESFSNASNIEIIDLPINYFTGKVSI----IFGRLKNLWSLDLGINNLGSGGAN----DLDFVTILTNCSKLKVLAFE 329 (997)
Q Consensus 258 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~l~~L~~L~Ls~N~l~~~~~~----~~~~~~~l~~l~~L~~L~L~ 329 (997)
.++..+..+++|++|+|++|++++..+. .|..+++|++|+|++|.+..+... ...+...+..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 3444455555566666666655544322 244455555555555443322110 00111223455666666666
Q ss_pred cCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccc----c---------ccc
Q 001908 330 ENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQ----L---------RNL 396 (997)
Q Consensus 330 ~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~----l---------~~L 396 (997)
+|++++.-. ..+|..+.++++|++|+|++|++++..+..+.. + ++|
T Consensus 103 ~n~l~~~~~---------------------~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L 161 (386)
T 2ca6_A 103 DNAFGPTAQ---------------------EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPL 161 (386)
T ss_dssp SCCCCTTTH---------------------HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred CCcCCHHHH---------------------HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCC
Confidence 555542100 046778889999999999999997554444443 3 778
Q ss_pred ceecccccccc-ccch---hhhcCCCCCCeEEeecCcCC--C---CCCCCCCCCCCCcEEecCCCcccCCcccccccccc
Q 001908 397 QAIGLSSNFLQ-GNIP---SSLGNLTLMTDLFLSSNHLQ--G---NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITT 467 (997)
Q Consensus 397 ~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 467 (997)
++|+|++|+++ +.+| ..+..+++|+.|+|++|+++ | ..|..+..+++|++|+|++|.++...
T Consensus 162 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g--------- 232 (386)
T 2ca6_A 162 RSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLG--------- 232 (386)
T ss_dssp CEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHH---------
T ss_pred cEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHH---------
Confidence 88888888886 3444 45667777888888887776 2 34446666777777777777664100
Q ss_pred cccccccCCCcccCCCccccccccccceecccccccccc----cccccc--CCcCccEEEccCccccc----cCChhc-c
Q 001908 468 LSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE----IPVTLT--GCTGLEIFHMQGNSFRG----SIPLSL-R 536 (997)
Q Consensus 468 ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~--~l~~L~~L~Ls~N~l~~----~~p~~~-~ 536 (997)
.+.+|..+..+++|+.|+|++|++++. +|..+. .+++|+.|+|++|++++ .+|..+ .
T Consensus 233 ------------~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~ 300 (386)
T 2ca6_A 233 ------------SSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDE 300 (386)
T ss_dssp ------------HHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHh
Confidence 023455566667777777777777755 455663 37888888888888886 477766 5
Q ss_pred ccCcCCeeeCccccccccCc
Q 001908 537 SLKSIKELDLSCNNLSGQIP 556 (997)
Q Consensus 537 ~l~~L~~L~Ls~N~l~~~~p 556 (997)
++++|+.|+|++|++++..|
T Consensus 301 ~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 301 KMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp HCTTCCEEECTTSBSCTTSH
T ss_pred cCCCceEEEccCCcCCcchh
Confidence 67888888888888887664
No 339
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=2.5e-24 Score=254.14 Aligned_cols=207 Identities=25% Similarity=0.306 Sum_probs=143.9
Q ss_pred CCCCCCCCCCCC-----eeeee-eecCCCCcEEEEeccCCCCCCcccccccCccccccccccccccCCCCCccCCCCCCC
Q 001908 51 VTNSWNNSINLC-----QWAGV-TCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYINLATNNFHGEIPKEIGFLFRL 124 (997)
Q Consensus 51 ~~~sW~~~~~~c-----~w~gv-~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 124 (997)
.+.+|..+.++| .|.|+ .|.. .+++.|+|++|++++ +|+.++ ++|++|+|++|+++ .+| +.+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCC
Confidence 356676666778 79999 7863 479999999999987 888774 89999999999999 788 568999
Q ss_pred eEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccccCcCcCccCcc-hhhhhhccC
Q 001908 125 ETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHLTGMLPASIGNL-SIIYLHVGE 203 (997)
Q Consensus 125 ~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l~g~~p~~~~~l-~~~~L~l~~ 203 (997)
++|+|++|.|++ ||. +++ +|++|++++|++.+ +|. .+++|++|+|++|.|++ +|. .+ ++.+|+|++
T Consensus 103 ~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~ 169 (571)
T 3cvr_A 103 EYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRN 169 (571)
T ss_dssp CEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCS
T ss_pred CEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCC
Confidence 999999999996 888 766 88888888888876 776 35678888888888775 554 22 344566666
Q ss_pred ccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCc-------cEEEecCCcCcCCCCCCCCCCCCCcEEeccC
Q 001908 204 NQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNL-------QVFAIGDNYFSGSIPESFSNASNIEIIDLPI 276 (997)
Q Consensus 204 N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L-------~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 276 (997)
|++++ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|++|+|++
T Consensus 170 N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~ 239 (571)
T 3cvr_A 170 NQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILED 239 (571)
T ss_dssp SCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC-----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCS
T ss_pred CCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeC
Confidence 66664 555 44 56666666666665 5555 321 34 55555555555 3555555555555555555
Q ss_pred ccCCCcccccccc
Q 001908 277 NYFTGKVSIIFGR 289 (997)
Q Consensus 277 N~l~~~~~~~~~~ 289 (997)
|.|++.+|..|..
T Consensus 240 N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 240 NPLSSRIRESLSQ 252 (571)
T ss_dssp SSCCHHHHHHHHH
T ss_pred CcCCCcCHHHHHH
Confidence 5555555544443
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=1.4e-22 Score=216.36 Aligned_cols=182 Identities=23% Similarity=0.231 Sum_probs=118.8
Q ss_pred CCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecC
Q 001908 371 NLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLS 450 (997)
Q Consensus 371 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (997)
+.+.+++++|.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 3455666666665 3444333 355555555555555555555555555555555555555555555555555555555
Q ss_pred CCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcccccc
Q 001908 451 DNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS 530 (997)
Q Consensus 451 ~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (997)
+|++ ++..+..|..+++|++|+|++|++++..+..|.++++|+.|+|++|+|++.
T Consensus 92 ~n~l-------------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 92 NNQL-------------------------ASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp TSCC-------------------------CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcc-------------------------cccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 5554 444445566677777777777777765556677777777888888877766
Q ss_pred CChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 531 IPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
.+..|..+++|+.|+|++|+|++..+..+..+++|++|+|++|++++...
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~ 196 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRC 196 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTST
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCcc
Confidence 66677778888888888888887777777788888888888888877643
No 341
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=5.9e-24 Score=251.32 Aligned_cols=196 Identities=16% Similarity=0.149 Sum_probs=141.2
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccc--------hhhHHHHHHHHHHHhhcCCCCcceEEeeeeccCc
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQ--------KGALKSFVAECEVLRNTRHRNLIKIITVCSSIDF 750 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~ 750 (997)
..+...+.||+|+||+||+|+. .++.+|+|+..... ....+.+.+|++++++++||||+++..++..
T Consensus 336 ~~~~~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~--- 410 (540)
T 3en9_A 336 KRKIPEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD--- 410 (540)
T ss_dssp ------------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE---
T ss_pred ccCCCCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe---
Confidence 3345567999999999999965 67889999864221 1124568999999999999999954444332
Q ss_pred CCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEE
Q 001908 751 KGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAH 830 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~k 830 (997)
.+..++||||+++++|.+++.. +..++.|+++||+|||++ +|+||||||+||+++. ++|
T Consensus 411 --~~~~~lVmE~~~ggsL~~~l~~--------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~k 469 (540)
T 3en9_A 411 --LDNKRIMMSYINGKLAKDVIED--------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLY 469 (540)
T ss_dssp --TTTTEEEEECCCSEEHHHHSTT--------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEE
T ss_pred --CCccEEEEECCCCCCHHHHHHH--------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEE
Confidence 3356999999999999999975 347899999999999999 9999999999999998 999
Q ss_pred EcccccchhcccCCCCCccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCCC
Q 001908 831 VSDFGLARFLFARPFDTSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRPT 910 (997)
Q Consensus 831 l~DFg~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P~ 910 (997)
|+|||+|+........ ............||+.|||||++.... ..|+..+|+|+..+-..+-+.++.+|
T Consensus 470 L~DFGla~~~~~~~~~-~~~~~~~~~~~~GT~~y~APEv~~~~~----------~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 470 IIDFGLGKISNLDEDK-AVDLIVFKKAVLSTHHEKFDEIWERFL----------EGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp ECCCTTCEECCCHHHH-HHHHHHHHHHHHHHCGGGHHHHHHHHH----------HHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred EEECccCEECCCcccc-ccchhhhhhhhcCCCCcCCHHHHHHHH----------HHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 9999999875211000 000000123567999999999887421 34777889999999999888887776
Q ss_pred C
Q 001908 911 N 911 (997)
Q Consensus 911 ~ 911 (997)
.
T Consensus 539 ~ 539 (540)
T 3en9_A 539 V 539 (540)
T ss_dssp C
T ss_pred C
Confidence 4
No 342
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=1.6e-23 Score=231.33 Aligned_cols=199 Identities=16% Similarity=0.172 Sum_probs=146.1
Q ss_pred cccccccCcccccccCCCC--CCCCCCCEEeccCCCCCCCCC----CCcccccccceeccccccccccchhhhcCCCCCC
Q 001908 348 MTDIYMGVNQISGTIPSGI--GNLVNLNLLGIEFNQLTGNIP----REIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMT 421 (997)
Q Consensus 348 L~~L~l~~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 421 (997)
|++|++++|.+++..|..+ .++++|++|+|++|++++..+ ..+..+++|++|+|++|++++..|..|..+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 4455555555555555555 667777777777777776554 2345677788888888888777777777888888
Q ss_pred eEEeecCcCCCC--C--CCCCCCCCCCcEEecCCCcccCCcccc----cccccccccccccCCCcccCCCccccccc---
Q 001908 422 DLFLSSNHLQGN--I--PPSLGNCKNLVSLNLSDNKLIGAVPQQ----ILTITTLSRFLDLGNNHLNGSLPLEVGNL--- 490 (997)
Q Consensus 422 ~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l--- 490 (997)
+|+|++|++.+. + +..+..+++|++|+|++|+++ .+|.. +..++++ ++|+|++|++++..|..+..+
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L-~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAGVQP-HSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCC-SSEECTTSCCCCCCCSCCSSCCCC
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCC-CEEECCCCCCCccchhhHHhccCc
Confidence 888888877642 1 233467788888888888886 33332 3456777 888888888887778777766
Q ss_pred cccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccc
Q 001908 491 KNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSG 553 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (997)
++|++|+|++|+|+ .+|..+. ++|+.|+|++|+|++. |. +..+++|+.|+|++|+|+.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 68999999999998 7787775 7999999999999964 43 6788999999999999873
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=6.4e-23 Score=217.31 Aligned_cols=196 Identities=18% Similarity=0.204 Sum_probs=161.9
Q ss_pred cccccccccCcccccccCCCCCCCCCCCEEeccCCC-CCCCCCCCcccccccceecccc-ccccccchhhhcCCCCCCeE
Q 001908 346 TTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQ-LTGNIPREIGQLRNLQAIGLSS-NFLQGNIPSSLGNLTLMTDL 423 (997)
Q Consensus 346 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L 423 (997)
..++.|++++|+|++..+..|.++++|++|++++|+ +++..+..|.++++|++|+|++ |++++..+..|.++++|+.|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 467778888888887777788889999999999997 8877777888999999999998 89987667788899999999
Q ss_pred EeecCcCCCCCCCCCCCCCCCc---EEecCCC-cccCCccccccccccccc-ccccCCCcccCCCcc-ccccccccceec
Q 001908 424 FLSSNHLQGNIPPSLGNCKNLV---SLNLSDN-KLIGAVPQQILTITTLSR-FLDLGNNHLNGSLPL-EVGNLKNLVALY 497 (997)
Q Consensus 424 ~Ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~ll~-~L~Ls~N~l~~~~p~-~~~~l~~L~~L~ 497 (997)
++++|++++ +|. |..+++|+ +|++++| ++++..+..+..++++ + .|++++|+++ .+|. .|.. ++|+.|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L-~~~L~l~~n~l~-~i~~~~~~~-~~L~~L~ 185 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE-TLTLKLYNNGFT-SVQGYAFNG-TKLDAVY 185 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS-EEEEECCSCCCC-EECTTTTTT-CEEEEEE
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcc-eeEEEcCCCCCc-ccCHhhcCC-CCCCEEE
Confidence 999999986 666 88888888 9999999 8875555667788888 8 8999999998 4444 4444 8999999
Q ss_pred ccccc-ccccccccccCC-cCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 498 ISGNQ-FSGEIPVTLTGC-TGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 498 Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+++|+ +++..+..|.++ ++|+.|++++|++++ +|.. .+++|+.|+++++
T Consensus 186 L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 186 LNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK--GLEHLKELIARNT 236 (239)
T ss_dssp CTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT--TCTTCSEEECTTC
T ss_pred cCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh--HhccCceeeccCc
Confidence 99995 987667789999 999999999999984 4544 6778999999876
No 344
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=1e-22 Score=224.29 Aligned_cols=212 Identities=26% Similarity=0.350 Sum_probs=172.1
Q ss_pred cccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeec
Q 001908 348 MTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSS 427 (997)
Q Consensus 348 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 427 (997)
+..+.++.+.++..+ .+..+++|+.|++++|+++. +| .+..+++|++|+|++|++++..+ +..+++|++|+|++
T Consensus 21 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 21 AIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSG 94 (308)
T ss_dssp HHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCS
T ss_pred HHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccC
Confidence 344556666665433 24567889999999999885 44 68888999999999999985444 88999999999999
Q ss_pred CcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccc
Q 001908 428 NHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 428 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
|++++ ++ .+..+++|++|++++|++++ +|. +..++++ +.|++++|++++..+ +..+++|+.|++++|++++.
T Consensus 95 n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L-~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~- 166 (308)
T 1h6u_A 95 NPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNL-QVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDL- 166 (308)
T ss_dssp CCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTC-CEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-
T ss_pred CcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCC-CEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCC-
Confidence 99985 33 68889999999999999875 443 7788888 889999999986544 88899999999999999854
Q ss_pred cccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 508 PVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
+. +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..| +..+++|+.|++++|++++.
T Consensus 167 ~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 167 TP-LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp GG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEECC
T ss_pred hh-hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeecC
Confidence 43 8899999999999999986544 8899999999999999986553 88999999999999999863
No 345
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=6.2e-22 Score=211.35 Aligned_cols=181 Identities=19% Similarity=0.194 Sum_probs=139.4
Q ss_pred cccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEe
Q 001908 346 TTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFL 425 (997)
Q Consensus 346 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 425 (997)
...+.++++++.++ .+|..+. ++|+.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35678999999998 6777665 68999999999999999999999999999999999999988889999999999999
Q ss_pred ecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccc
Q 001908 426 SSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSG 505 (997)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 505 (997)
++|++++..+..|..+++|++|+|++|++++..+.. |..+++|++|+|++|++++
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-------------------------~~~l~~L~~L~Ls~N~l~~ 145 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGV-------------------------FDRLTKLKELRLNTNQLQS 145 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT-------------------------TTTCTTCCEEECCSSCCCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhH-------------------------hccCCcccEEECcCCcCCc
Confidence 999999888888999999999999999887433333 3444555555555555554
Q ss_pred cccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccccccc
Q 001908 506 EIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQ 554 (997)
Q Consensus 506 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (997)
..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|++++.
T Consensus 146 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 146 IPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 4444555556666666666666655555566666666666666666544
No 346
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=3.2e-22 Score=224.68 Aligned_cols=241 Identities=18% Similarity=0.198 Sum_probs=149.0
Q ss_pred cEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCC-CCcccccccce-ecc
Q 001908 324 KVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIP-REIGQLRNLQA-IGL 401 (997)
Q Consensus 324 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L 401 (997)
++++.++|+++ .+|..+ ++++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+| ..|.++++|++ +.+
T Consensus 12 ~~v~C~~~~Lt-~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL---PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp TEEEEESTTCC-SCCTTC---CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred CEEEecCCCCC-ccCcCc---CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 34555666665 345433 2456777777777775555678888888888888888876555 46788887764 566
Q ss_pred ccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC-CcccCCcccccccccccccccccCCCccc
Q 001908 402 SSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD-NKLIGAVPQQILTITTLSRFLDLGNNHLN 480 (997)
Q Consensus 402 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~ 480 (997)
+.|+|++..|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+..+..+...++.|+|++|+|+
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~ 167 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ 167 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc
Confidence 77888877778888888888888888888877666777777788888855 45543323344444443366666666666
Q ss_pred CCCccccccccccceecccc-ccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhc
Q 001908 481 GSLPLEVGNLKNLVALYISG-NQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFL 559 (997)
Q Consensus 481 ~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 559 (997)
. +|.......+|+.|++++ |.++...+..|.++++|++|+|++|+|+...+..|.++++|+.+++ +++. .+| .+
T Consensus 168 ~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~--~~l~-~lP-~l 242 (350)
T 4ay9_X 168 E-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLK-KLP-TL 242 (350)
T ss_dssp E-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTTCCEEECTTC--TTCC-CCC-CT
T ss_pred C-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhccchHhhhccC--CCcC-cCC-Cc
Confidence 3 333333445666666653 4454222335566666666666666666433333443333333322 2233 344 25
Q ss_pred cCCCCCCEEeCCCC
Q 001908 560 ENLSFLEYLNLSYN 573 (997)
Q Consensus 560 ~~l~~L~~L~ls~N 573 (997)
.++++|+.++++++
T Consensus 243 ~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 243 EKLVALMEASLTYP 256 (350)
T ss_dssp TTCCSCCEEECSCH
T ss_pred hhCcChhhCcCCCC
Confidence 55666666666544
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=7.7e-24 Score=236.80 Aligned_cols=251 Identities=18% Similarity=0.188 Sum_probs=169.4
Q ss_pred CcEEEeecCccCCCCccccccc-ccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC-CCCCcccccccceec
Q 001908 323 LKVLAFEENRLGGVLPHSIANL-STTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN-IPREIGQLRNLQAIG 400 (997)
Q Consensus 323 L~~L~L~~N~l~~~~p~~~~~l-~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ 400 (997)
++.+++++|.+. |..+..+ .+.++.|++++|.+++..+. +..+++|++|++++|++++. +|..+..+++|++|+
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~ 124 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLS 124 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEE
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEe
Confidence 555555555554 2222222 13455566666666655444 44677788888888877755 666777778888888
Q ss_pred cccccccccchhhhcCCCCCCeEEeecC-cCCCC-CCCCCCCCCCCcEEecCCC-cccCC-ccccccccc-ccccccccC
Q 001908 401 LSSNFLQGNIPSSLGNLTLMTDLFLSSN-HLQGN-IPPSLGNCKNLVSLNLSDN-KLIGA-VPQQILTIT-TLSRFLDLG 475 (997)
Q Consensus 401 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~ll~~L~Ls 475 (997)
|++|.+++..|..++.+++|++|+|++| .+++. ++..+.++++|++|++++| .+++. ++..+..++ ++ +.|+++
T Consensus 125 L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L-~~L~l~ 203 (336)
T 2ast_B 125 LEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETI-TQLNLS 203 (336)
T ss_dssp CTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTC-CEEECC
T ss_pred CcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCC-CEEEeC
Confidence 8888877777777777888888888887 56642 5555677778888888888 77643 566666777 66 778888
Q ss_pred CC--ccc-CCCccccccccccceecccccc-ccccccccccCCcCccEEEccCcc-ccccCChhccccCcCCeeeCcccc
Q 001908 476 NN--HLN-GSLPLEVGNLKNLVALYISGNQ-FSGEIPVTLTGCTGLEIFHMQGNS-FRGSIPLSLRSLKSIKELDLSCNN 550 (997)
Q Consensus 476 ~N--~l~-~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (997)
+| .++ +.+|..+..+++|+.|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++|
T Consensus 204 ~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~- 282 (336)
T 2ast_B 204 GYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI- 282 (336)
T ss_dssp SCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-
T ss_pred CCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-
Confidence 87 444 3556667778888888888888 676777788888888888888885 32222225777888888888888
Q ss_pred ccccCchhccCC-CCCCEEeCCCCcCcccCCCC
Q 001908 551 LSGQIPEFLENL-SFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 551 l~~~~p~~~~~l-~~L~~L~ls~N~l~~~~p~~ 582 (997)
++. ..+..+ ..|+.|++++|++++..|..
T Consensus 283 i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~ 312 (336)
T 2ast_B 283 VPD---GTLQLLKEALPHLQINCSHFTTIARPT 312 (336)
T ss_dssp SCT---TCHHHHHHHSTTSEESCCCSCCTTCSS
T ss_pred cCH---HHHHHHHhhCcceEEecccCccccCCc
Confidence 432 233333 23666678888888877754
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=6.8e-22 Score=222.04 Aligned_cols=238 Identities=15% Similarity=0.093 Sum_probs=127.4
Q ss_pred hhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCC-CCCCCCCCCcE-EeccC
Q 001908 199 LHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIP-ESFSNASNIEI-IDLPI 276 (997)
Q Consensus 199 L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~Ls~ 276 (997)
++.++|+++ .||..+. +++++|+|++|+|+ .||...|.++++|++|+|++|++.+.+| .+|.++++++. ++++.
T Consensus 14 v~C~~~~Lt-~iP~~l~--~~l~~L~Ls~N~i~-~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 14 FLCQESKVT-EIPSDLP--RNAIELRFVLTKLR-VIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEESTTCC-SCCTTCC--TTCSEEEEESCCCS-EECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEecCCCCC-ccCcCcC--CCCCEEEccCCcCC-CcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 344444444 4555442 45666667666666 5666666666667777777776655554 34666666553 55556
Q ss_pred ccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeec-CccCCCCcccccccccccccccccC
Q 001908 277 NYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEE-NRLGGVLPHSIANLSTTMTDIYMGV 355 (997)
Q Consensus 277 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~~L~~L~l~~ 355 (997)
|+++.+.+..|..+++|++|++++|+++.++.. .+....++..|++.+ |++....+..|..+...++.|++++
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~------~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV------HKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC------TTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred CcccccCchhhhhccccccccccccccccCCch------hhcccchhhhhhhccccccccccccchhhcchhhhhhcccc
Confidence 667666666666666777777766666654432 122344555666644 3444433444444444455556666
Q ss_pred cccccccCCCCCCCCCCCEEeccC-CCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCC
Q 001908 356 NQISGTIPSGIGNLVNLNLLGIEF-NQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNI 434 (997)
Q Consensus 356 N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 434 (997)
|+|+. +|.......+|+.|++++ |.++.+.++.|.++++|++|+|++|+|+...+.. +.+|+.|.+.++.--..+
T Consensus 164 N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~---~~~L~~L~~l~~~~l~~l 239 (350)
T 4ay9_X 164 NGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG---LENLKKLRARSTYNLKKL 239 (350)
T ss_dssp SCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS---CTTCCEEECTTCTTCCCC
T ss_pred ccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh---hccchHhhhccCCCcCcC
Confidence 66653 333333344566666553 4444333344566666666666666665322222 334444443333222244
Q ss_pred CCCCCCCCCCcEEecCC
Q 001908 435 PPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 435 p~~~~~l~~L~~L~L~~ 451 (997)
| .+.++++|+.+++++
T Consensus 240 P-~l~~l~~L~~l~l~~ 255 (350)
T 4ay9_X 240 P-TLEKLVALMEASLTY 255 (350)
T ss_dssp C-CTTTCCSCCEEECSC
T ss_pred C-CchhCcChhhCcCCC
Confidence 4 255556666666544
No 349
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.5e-21 Score=214.93 Aligned_cols=174 Identities=26% Similarity=0.423 Sum_probs=137.8
Q ss_pred CCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCC
Q 001908 365 GIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNL 444 (997)
Q Consensus 365 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 444 (997)
.+..+++|++|+|++|++++..+ +.++++|++|+|++|++++ +| .+..+++|+.|+|++|++++ ++. +..+++|
T Consensus 58 ~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L 131 (308)
T 1h6u_A 58 GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNL 131 (308)
T ss_dssp TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTC
T ss_pred hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCC
Confidence 45667788888888888876544 7788888888888888875 33 57888888888888888875 333 7888888
Q ss_pred cEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccC
Q 001908 445 VSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQG 524 (997)
Q Consensus 445 ~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (997)
++|++++|++++..+ +..++++ +.|++++|++++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++
T Consensus 132 ~~L~l~~n~l~~~~~--l~~l~~L-~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~ 204 (308)
T 1h6u_A 132 QVLYLDLNQITNISP--LAGLTNL-QYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKN 204 (308)
T ss_dssp CEEECCSSCCCCCGG--GGGCTTC-CEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTT
T ss_pred CEEECCCCccCcCcc--ccCCCCc-cEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccC
Confidence 888888888874433 6777777 888888888885433 8888999999999999985443 88899999999999
Q ss_pred ccccccCChhccccCcCCeeeCccccccc
Q 001908 525 NSFRGSIPLSLRSLKSIKELDLSCNNLSG 553 (997)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 553 (997)
|++++..| +..+++|+.|+|++|++++
T Consensus 205 N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 205 NQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CccCcccc--ccCCCCCCEEEccCCeeec
Confidence 99986553 8899999999999999985
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=1.5e-21 Score=230.57 Aligned_cols=188 Identities=24% Similarity=0.335 Sum_probs=96.7
Q ss_pred CCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecc
Q 001908 322 KLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGL 401 (997)
Q Consensus 322 ~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 401 (997)
+|+.|+|++|++++ +|..+. ++|+.|++++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~---~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP---PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC---TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhHc---CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEEC
Confidence 67777777777765 444332 34555555555554 333 223444445555544443 333 332 4444444
Q ss_pred ccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccC
Q 001908 402 SSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNG 481 (997)
Q Consensus 402 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~ 481 (997)
++|+|++ +|. .+++|+.|+|++|+|++ +|. .+++| +.|+|++|+|++
T Consensus 128 s~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L-------------------------~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 128 DNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSL-------------------------EVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTC-------------------------CEEECCSSCCSC
T ss_pred CCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCc-------------------------CEEECCCCCCCC
Confidence 4444443 333 33444444444444443 332 23344 444444444443
Q ss_pred CCccccccccccceeccccccccccccccccCCcCc-------cEEEccCccccccCChhccccCcCCeeeCcccccccc
Q 001908 482 SLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGL-------EIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQ 554 (997)
Q Consensus 482 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (997)
+|. |. ++|+.|+|++|+|+ .+|. |.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++.
T Consensus 175 -lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~ 245 (571)
T 3cvr_A 175 -LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSSR 245 (571)
T ss_dssp -CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCHH
T ss_pred -cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCCc
Confidence 333 33 55555666666555 4444 433 44 66677777666 4666666677777777777777766
Q ss_pred CchhccCCC
Q 001908 555 IPEFLENLS 563 (997)
Q Consensus 555 ~p~~~~~l~ 563 (997)
+|..+..++
T Consensus 246 ~p~~l~~l~ 254 (571)
T 3cvr_A 246 IRESLSQQT 254 (571)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHhh
Confidence 666665543
No 351
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.85 E-value=1.4e-23 Score=249.45 Aligned_cols=222 Identities=18% Similarity=0.119 Sum_probs=135.5
Q ss_pred eeeeeeecCCCCcEEEEeccCCCCC-------------------------Cccccc---ccCccccccccccccccCCCC
Q 001908 63 QWAGVTCGHRHQRVTELDLRHQNIG-------------------------GSLSPY---VGNLSFLRYINLATNNFHGEI 114 (997)
Q Consensus 63 ~w~gv~C~~~~~~v~~L~L~~~~l~-------------------------g~~~~~---l~~l~~L~~L~Ls~N~l~g~~ 114 (997)
+|+++.|+....+|-.+++..-.+. |..+.. +..+++|+.|+|++|+++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 5888888777778888887654331 111111 256778888888888887 78
Q ss_pred CccCCCCCCCeEEEccCCC-------------ccccCCccccCCCcccchh-cccccccccccccccccccccceeeccc
Q 001908 115 PKEIGFLFRLETLMLANNS-------------FSGKIPTNLSSCSNLLSFV-AYRNNLVGEIPEDIGYSWLKLEHISLAR 180 (997)
Q Consensus 115 p~~~~~l~~L~~L~Ls~N~-------------l~g~iP~~l~~l~~L~~l~-l~~n~~~g~ip~~~~~~l~~L~~L~L~~ 180 (997)
|+++++|++|++|++++|. +.|.+|..++++++|+.|+ +..|.+ .+|..+.+++
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~------------~~L~~l~l~~ 432 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL------------DDLRSKFLLE 432 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc------------chhhhhhhhc
Confidence 8888888888888887765 4455555566666666555 333322 2344555555
Q ss_pred ccccCcCcCccCcchhhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCC
Q 001908 181 NHLTGMLPASIGNLSIIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIP 260 (997)
Q Consensus 181 N~l~g~~p~~~~~l~~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p 260 (997)
|.+++..+. .+.+|+|++|++++ +|. ++++++|+.|+|++|+|+ .+|..++ .+++|+.|+|++|+|++ +|
T Consensus 433 n~i~~l~~~-----~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 433 NSVLKMEYA-----DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA-ALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHHT-----TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG-GCTTCCEEECCSSCCCC-CG
T ss_pred ccccccCcc-----CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh-cCCCCCEEECCCCCCCC-Cc
Confidence 555532221 23446666666664 554 666666666666666666 5665444 56666666666666664 44
Q ss_pred CCCCCCCCCcEEeccCccCCCcc-cccccccCccCeeEccCccCCCCCC
Q 001908 261 ESFSNASNIEIIDLPINYFTGKV-SIIFGRLKNLWSLDLGINNLGSGGA 308 (997)
Q Consensus 261 ~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~~ 308 (997)
.|+++++|++|+|++|+|++.. |..|+.+++|++|+|++|++++.++
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 5666666666666666666655 5666666666666666666655433
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=8.1e-21 Score=196.46 Aligned_cols=161 Identities=23% Similarity=0.198 Sum_probs=74.6
Q ss_pred CCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecC
Q 001908 371 NLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLS 450 (997)
Q Consensus 371 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 450 (997)
+|++|++++|++++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|.++++|++|+|+
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 44555555555554444444445555555555555544333344445555555555555544434444444444444444
Q ss_pred CCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcccccc
Q 001908 451 DNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS 530 (997)
Q Consensus 451 ~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 530 (997)
+|++++ ..+..|..+++|+.|++++|++++..+..|..+++|+.|++++|.+.+
T Consensus 109 ~N~l~~-------------------------~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~- 162 (208)
T 2o6s_A 109 TNQLQS-------------------------LPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC- 162 (208)
T ss_dssp SSCCCC-------------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-
T ss_pred CCcCcc-------------------------cCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-
Confidence 444442 222223344444444444444443333334444444444444444432
Q ss_pred CChhccccCcCCeeeCccccccccCchhccCCC
Q 001908 531 IPLSLRSLKSIKELDLSCNNLSGQIPEFLENLS 563 (997)
Q Consensus 531 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 563 (997)
.+++|+.|+++.|+++|.+|..++.++
T Consensus 163 ------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 163 ------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp ------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred ------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 223445555555555555555544443
No 353
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=1.5e-20 Score=194.32 Aligned_cols=163 Identities=21% Similarity=0.184 Sum_probs=111.6
Q ss_pred cccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEe
Q 001908 346 TTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFL 425 (997)
Q Consensus 346 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 425 (997)
++++.|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|++++..+..|.++++|++|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 34566666666666555666777778888888888887666666777788888888888887666666777888888888
Q ss_pred ecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccc
Q 001908 426 SSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSG 505 (997)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 505 (997)
++|+|++..+..|.++++|++|+|++|++++..+..+..++++ +.|++++|.+.+. +++|+.|+++.|+++|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL-QYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 179 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSCCBCCC-------TTTTHHHHHHHHHCTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCc-cEEEecCCCeecC-------CCCHHHHHHHHHhCCc
Confidence 8888876666667777788888887777775444445555555 6666666655532 3456666666666666
Q ss_pred cccccccCCcC
Q 001908 506 EIPVTLTGCTG 516 (997)
Q Consensus 506 ~~p~~~~~l~~ 516 (997)
.+|.+++.++.
T Consensus 180 ~ip~~~~~l~~ 190 (208)
T 2o6s_A 180 VVRNSAGSVAP 190 (208)
T ss_dssp TBBCTTSSBCT
T ss_pred eeeccCccccC
Confidence 66666555443
No 354
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.83 E-value=5e-21 Score=207.23 Aligned_cols=140 Identities=19% Similarity=0.209 Sum_probs=112.0
Q ss_pred HHHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccch------------------hhHHHHHHHHHHHhhcC
Q 001908 673 ELSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK------------------GALKSFVAECEVLRNTR 734 (997)
Q Consensus 673 ~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~ 734 (997)
.+......|.+.+.||+|+||.||+|++ .+|+.||||+++.... .....+.+|++++++++
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~ 162 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ 162 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc
Confidence 3344445677779999999999999999 6899999999963221 13467899999999998
Q ss_pred CCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEec
Q 001908 735 HRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHG 814 (997)
Q Consensus 735 h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHr 814 (997)
| +++.+++. .+..++||||+++|+|.+ +... ....++.|++.|+.|||+. +|+||
T Consensus 163 ~---~~v~~~~~------~~~~~lvmE~~~g~~L~~-l~~~------------~~~~i~~qi~~~l~~lH~~---giiHr 217 (282)
T 1zar_A 163 G---LAVPKVYA------WEGNAVLMELIDAKELYR-VRVE------------NPDEVLDMILEEVAKFYHR---GIVHG 217 (282)
T ss_dssp T---SSSCCEEE------EETTEEEEECCCCEEGGG-CCCS------------CHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred C---CCcCeEEe------ccceEEEEEecCCCcHHH-cchh------------hHHHHHHHHHHHHHHHHHC---CCEeC
Confidence 4 55555432 135699999999999988 4221 2346999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEcccccchh
Q 001908 815 DLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 815 Dlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
||||+||+++ ++.+||+|||+|+.
T Consensus 218 Dlkp~NILl~-~~~vkl~DFG~a~~ 241 (282)
T 1zar_A 218 DLSQYNVLVS-EEGIWIIDFPQSVE 241 (282)
T ss_dssp CCSTTSEEEE-TTEEEECCCTTCEE
T ss_pred CCCHHHEEEE-CCcEEEEECCCCeE
Confidence 9999999999 99999999999863
No 355
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=8.3e-22 Score=241.54 Aligned_cols=232 Identities=17% Similarity=0.152 Sum_probs=127.2
Q ss_pred CHHHHHHHHHHHHhcCC-CCCCCCCCC-CCCCCCeeeeeeecCCCCcEEEEeccCCCCCCcccccccCccccccc-----
Q 001908 31 NETDRLALLAIKSQLHD-PLGVTNSWN-NSINLCQWAGVTCGHRHQRVTELDLRHQNIGGSLSPYVGNLSFLRYI----- 103 (997)
Q Consensus 31 ~~~~~~aLl~~k~~~~~-~~~~~~sW~-~~~~~c~w~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~l~~L~~L----- 103 (997)
...++++|+++..++.. ....-.+|. .++..+.|.+++++. .+++.|+|.+|++.+ ++..+.....|+.+
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~ 206 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDE-ANQALLQHKKLSQYSIDED 206 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCc-chhhHhhcCccCcccccCc
Confidence 45688999999988532 223344674 445678999999864 689999999999876 34433333223332
Q ss_pred cccccccCCCCCccCCCCCCCeEEEccCCCccccCCccccCCCcccchhcccccccccccccccccccccceeecccccc
Q 001908 104 NLATNNFHGEIPKEIGFLFRLETLMLANNSFSGKIPTNLSSCSNLLSFVAYRNNLVGEIPEDIGYSWLKLEHISLARNHL 183 (997)
Q Consensus 104 ~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~iP~~l~~l~~L~~l~l~~n~~~g~ip~~~~~~l~~L~~L~L~~N~l 183 (997)
+++.|.+. ..|..+..+++|++|+|++|.+. .||..++++++|++|++++|++. .||..++ .+++|++|+|++|.|
T Consensus 207 ~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~Ls~N~l 282 (727)
T 4b8c_D 207 DDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIK-NLSNLRVLDLSHNRL 282 (727)
T ss_dssp ----------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG-GGTTCCEEECTTSCC
T ss_pred ccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhh-CCCCCCEEeCcCCcC
Confidence 23334444 55788999999999999999998 89999999999999999999988 8898774 688999999999999
Q ss_pred cCcCcCccCcch-hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCC
Q 001908 184 TGMLPASIGNLS-IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPES 262 (997)
Q Consensus 184 ~g~~p~~~~~l~-~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~ 262 (997)
+ .+|..|+++. +.+|+|++|+++ .+|..|+++++|+.|+|++|.|+|.+|..++.....+..++|++|.++|.+|..
T Consensus 283 ~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~ 360 (727)
T 4b8c_D 283 T-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE 360 (727)
T ss_dssp S-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_pred C-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc
Confidence 8 7788888874 567888888886 778888888888888888888887777666532223344678888888887764
Q ss_pred CCCCCCCcEEeccCc
Q 001908 263 FSNASNIEIIDLPIN 277 (997)
Q Consensus 263 ~~~l~~L~~L~Ls~N 277 (997)
|+.|++++|
T Consensus 361 ------l~~l~l~~n 369 (727)
T 4b8c_D 361 ------RRFIEINTD 369 (727)
T ss_dssp ---------------
T ss_pred ------cceeEeecc
Confidence 455666666
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=1.7e-20 Score=195.55 Aligned_cols=158 Identities=19% Similarity=0.232 Sum_probs=121.0
Q ss_pred CeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc-ccccccccccccccCCCcccCCCccccccccccceeccc
Q 001908 421 TDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYIS 499 (997)
Q Consensus 421 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 499 (997)
+.+++++|.++ .+|..+. ..+++|+|++|++++..|. .+..++++ +.|+|++|+|++..+..|.++++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L-~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQL-RKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTC-CEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCC-CEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 35566666665 3444432 3345666666666644332 34556665 666777777776666678888889999999
Q ss_pred cccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccC
Q 001908 500 GNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEV 579 (997)
Q Consensus 500 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 579 (997)
+|++++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++.+
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 99998877778889999999999999999888889999999999999999999888899999999999999999999877
Q ss_pred CCC
Q 001908 580 PTK 582 (997)
Q Consensus 580 p~~ 582 (997)
+..
T Consensus 170 ~l~ 172 (220)
T 2v70_A 170 YLA 172 (220)
T ss_dssp GGH
T ss_pred chH
Confidence 643
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=7.3e-20 Score=199.57 Aligned_cols=189 Identities=24% Similarity=0.331 Sum_probs=111.6
Q ss_pred cccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeec
Q 001908 348 MTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSS 427 (997)
Q Consensus 348 L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 427 (997)
+..+.++.+.+++.. .+..+++|+.|++++|.++.. + .+..+++|++|+|++|++++..+ +.++++|+.|+|++
T Consensus 26 ~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~ 99 (291)
T 1h6t_A 26 TIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDE 99 (291)
T ss_dssp HHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCC
Confidence 344455555555332 234567777777777777743 3 36777777777777777775433 77777777777777
Q ss_pred CcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccc
Q 001908 428 NHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 428 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
|++++ +| .+..+++|++|++++|++++ + ..+ ..+++|+.|++++|++++.
T Consensus 100 n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l-------------------------~~l~~L~~L~l~~n~l~~~- 149 (291)
T 1h6t_A 100 NKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGL-------------------------VHLPQLESLYLGNNKITDI- 149 (291)
T ss_dssp SCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGG-------------------------GGCTTCCEEECCSSCCCCC-
T ss_pred CcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhh-------------------------cCCCCCCEEEccCCcCCcc-
Confidence 77764 33 36677777777777777653 2 223 3444555555555555432
Q ss_pred cccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcc
Q 001908 508 PVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 577 (997)
..+..+++|+.|++++|++++..| +..+++|+.|+|++|+|++ +| .+..+++|+.|++++|+++.
T Consensus 150 -~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 150 -TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred -hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 345555555555555555554333 5555555555555555553 22 25555666666666665554
No 358
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=4.6e-20 Score=192.29 Aligned_cols=137 Identities=20% Similarity=0.267 Sum_probs=92.1
Q ss_pred CCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEc
Q 001908 443 NLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHM 522 (997)
Q Consensus 443 ~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 522 (997)
+|++|+|++|++++..+..+..++++ +.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|+.|+|
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L-~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L 111 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKL-RRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLL 111 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTC-CEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCC-CEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEEC
Confidence 44444444444443333334444444 44444444444455666777777777777777777555555677788888888
Q ss_pred cCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 523 QGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 523 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
++|+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|.+...
T Consensus 112 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 169 (220)
T 2v9t_B 112 NANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCH 169 (220)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred CCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCc
Confidence 8888887777778888888888888888887777778888888888888888876554
No 359
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.9e-19 Score=215.04 Aligned_cols=188 Identities=22% Similarity=0.276 Sum_probs=97.3
Q ss_pred hhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccC
Q 001908 197 IYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPI 276 (997)
Q Consensus 197 ~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 276 (997)
..+.++.+.+...++ +..+++|+.|+|++|.+. .+|. +..+++|+.|+|++|+|++..| +..+++|+.|+|++
T Consensus 24 ~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~-~l~~--l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~ 96 (605)
T 1m9s_A 24 IKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIK-SVQG--IQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDE 96 (605)
T ss_dssp HHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCC-CCTT--GGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCS
T ss_pred HHHhccCCCcccccc--hhcCCCCCEEECcCCCCC-CChH--HccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcC
Confidence 345666666654333 456677777777777776 4442 2356666666666666665444 56666666666666
Q ss_pred ccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCc
Q 001908 277 NYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVN 356 (997)
Q Consensus 277 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N 356 (997)
|+|++.. .|..+++|+.|+|++|+|+.+ +.+..+++|+.|+|++|++++
T Consensus 97 N~l~~l~--~l~~l~~L~~L~Ls~N~l~~l--------~~l~~l~~L~~L~Ls~N~l~~--------------------- 145 (605)
T 1m9s_A 97 NKIKDLS--SLKDLKKLKSLSLEHNGISDI--------NGLVHLPQLESLYLGNNKITD--------------------- 145 (605)
T ss_dssp SCCCCCT--TSTTCTTCCEEECTTSCCCCC--------GGGGGCTTCSEEECCSSCCCC---------------------
T ss_pred CCCCCCh--hhccCCCCCEEEecCCCCCCC--------ccccCCCccCEEECCCCccCC---------------------
Confidence 6665432 345555555555555554432 123344444444444443332
Q ss_pred ccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCC
Q 001908 357 QISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG 432 (997)
Q Consensus 357 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 432 (997)
. ..+..+++|+.|+|++|+|++..| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++.+
T Consensus 146 ----l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 146 ----I--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp ----C--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEEC
T ss_pred ----c--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcC
Confidence 1 123344555555555555554433 44555555555555555532 2 34555555555555555543
No 360
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.80 E-value=1.3e-19 Score=197.50 Aligned_cols=172 Identities=28% Similarity=0.343 Sum_probs=125.8
Q ss_pred ccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccccccc
Q 001908 391 GQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSR 470 (997)
Q Consensus 391 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~ 470 (997)
..+++|++|++++|.++. ++ .+..+++|+.|+|++|++++..+ +.++++|++|++++|
T Consensus 43 ~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n------------------ 100 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN------------------ 100 (291)
T ss_dssp HHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS------------------
T ss_pred hhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC------------------
Confidence 345555555555555552 22 24455555555555555553322 445555555555554
Q ss_pred ccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccc
Q 001908 471 FLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNN 550 (997)
Q Consensus 471 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 550 (997)
++++ +| .+..+++|+.|++++|++++ + ..+..+++|+.|++++|++++. ..+..+++|+.|+|++|+
T Consensus 101 -------~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~ 167 (291)
T 1h6t_A 101 -------KVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQ 167 (291)
T ss_dssp -------CCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSC
T ss_pred -------cCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCc
Confidence 4442 22 37778899999999999985 3 4788999999999999999965 689999999999999999
Q ss_pred ccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcC
Q 001908 551 LSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLC 600 (997)
Q Consensus 551 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C 600 (997)
+++..| +..+++|++|++++|.+++. |....++++..+++.+|+..+
T Consensus 168 l~~~~~--l~~l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 168 ISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEEEC
T ss_pred cccchh--hcCCCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcccC
Confidence 997655 99999999999999999974 556678899999999998755
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=7.3e-20 Score=206.32 Aligned_cols=178 Identities=24% Similarity=0.203 Sum_probs=104.4
Q ss_pred CEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhc-CCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC
Q 001908 373 NLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLG-NLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 373 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (997)
+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777877777 3555443 3467777777777766666666 777777777777777766666677777777777777
Q ss_pred CcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccC
Q 001908 452 NKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI 531 (997)
Q Consensus 452 N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (997)
|++++..+ ..|.++++|+.|+|++|+|++..|..|.++++|+.|+|++|+|++..
T Consensus 98 N~l~~~~~-------------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 98 NHLHTLDE-------------------------FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp SCCCEECT-------------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred CcCCcCCH-------------------------HHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 76653333 33444455555555555555444555555555555555555555322
Q ss_pred Chhc---cccCcCCeeeCccccccccCchhccCCCC--CCEEeCCCCcCccc
Q 001908 532 PLSL---RSLKSIKELDLSCNNLSGQIPEFLENLSF--LEYLNLSYNHFDGE 578 (997)
Q Consensus 532 p~~~---~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~ls~N~l~~~ 578 (997)
+..| ..+++|+.|||++|+|++..+..+..++. |+.|+|++|+|.+.
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 2223 34555666666666665444445555554 25555555555543
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=2.2e-19 Score=214.49 Aligned_cols=191 Identities=24% Similarity=0.328 Sum_probs=140.7
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEee
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (997)
.+..+.++.+.+....+ +..+++|+.|++++|.++.. | .+..+++|+.|+|++|+|++..| +..+++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 35556667777665443 46778888899999988743 3 58888899999999999986554 8888999999999
Q ss_pred cCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccc
Q 001908 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE 506 (997)
Q Consensus 427 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 506 (997)
+|+|++ +| .+..+++|+.|+|++|++.+ + ..+..+++| +.|+|++|++++. ..++.+++|+.|+|++|+|++.
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L-~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQL-ESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTC-SEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCcc-CEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 999885 33 68888889999999888874 3 346666666 7777777777754 4567777777777777777755
Q ss_pred ccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccccccc
Q 001908 507 IPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQ 554 (997)
Q Consensus 507 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 554 (997)
.| +..+++|+.|+|++|+|++. | .+..+++|+.|+|++|++++.
T Consensus 169 ~~--l~~l~~L~~L~Ls~N~i~~l-~-~l~~l~~L~~L~L~~N~l~~~ 212 (605)
T 1m9s_A 169 VP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLNK 212 (605)
T ss_dssp GG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEECCSEEEECC
T ss_pred hh--hccCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEccCCcCcCC
Confidence 55 77777777777777777743 3 567777777777777777654
No 363
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=4.6e-19 Score=184.71 Aligned_cols=154 Identities=19% Similarity=0.220 Sum_probs=138.6
Q ss_pred cEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccC
Q 001908 445 VSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQG 524 (997)
Q Consensus 445 ~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 524 (997)
+.+++++|.++ .+|..+. ..+ +.|+|++|+|++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l-~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETI-TEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTC-CEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC--cCC-CEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 57788888877 6776554 445 8999999999988888999999999999999999988899999999999999999
Q ss_pred ccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCCC-CCcCCCCcceeecCCCCcCCC
Q 001908 525 NSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT-KGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 525 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~N~~~C~~ 602 (997)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|++++..+. ...+.++..+++.+|||.|.|
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 999976677789999999999999999999999999999999999999999988775 356788999999999999975
No 364
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=9.5e-19 Score=183.57 Aligned_cols=156 Identities=22% Similarity=0.215 Sum_probs=111.0
Q ss_pred cceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccC
Q 001908 396 LQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLG 475 (997)
Q Consensus 396 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls 475 (997)
-+.++.+++.++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l--------------------- 76 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQL--------------------- 76 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC---------------------
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCC---------------------
Confidence 445666666665 4554333 5566666666666655555555555555555555555
Q ss_pred CCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccC
Q 001908 476 NNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQI 555 (997)
Q Consensus 476 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 555 (997)
++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++..
T Consensus 77 ----~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~ 151 (229)
T 3e6j_A 77 ----GALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIP 151 (229)
T ss_dssp ----CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCC
T ss_pred ----CCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccC
Confidence 3333445667777888888888888666666788888888888888888 77888888888888888888888776
Q ss_pred chhccCCCCCCEEeCCCCcCcccCC
Q 001908 556 PEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 556 p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
+..|..+++|+.|+|++|++++.++
T Consensus 152 ~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 152 HGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHHhCCCCCCEEEeeCCCccCCcc
Confidence 7778888888888888888887765
No 365
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.2e-21 Score=232.64 Aligned_cols=192 Identities=20% Similarity=0.218 Sum_probs=135.0
Q ss_pred CCCCCCCEEeccCCCCCCCCCCCcccccccceecccccc-------------ccccchhhhcCCCCCCeEE-eecCcCCC
Q 001908 367 GNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNF-------------LQGNIPSSLGNLTLMTDLF-LSSNHLQG 432 (997)
Q Consensus 367 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-------------l~~~~p~~~~~l~~L~~L~-Ls~N~l~~ 432 (997)
..+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~- 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD- 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-
Confidence 55677778888888876 677778888888888877665 4566677777777777777 5666442
Q ss_pred CCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccccccccc
Q 001908 433 NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLT 512 (997)
Q Consensus 433 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 512 (997)
+|+.+.+++|.+.+ +|. ..+ +.|+|++|+|++ +|. |+.+++|+.|+|++|+|+ .+|..|+
T Consensus 424 ----------~L~~l~l~~n~i~~-l~~-----~~L-~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 424 ----------DLRSKFLLENSVLK-MEY-----ADV-RVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----------HHHHHHHHHHHHHH-HHH-----TTC-SEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----------hhhhhhhhcccccc-cCc-----cCc-eEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 34555555555542 221 123 667777777774 555 777777777777777777 6777777
Q ss_pred CCcCccEEEccCccccccCChhccccCcCCeeeCccccccccC-chhccCCCCCCEEeCCCCcCcccCCCC
Q 001908 513 GCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQI-PEFLENLSFLEYLNLSYNHFDGEVPTK 582 (997)
Q Consensus 513 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~~~~p~~ 582 (997)
++++|+.|+|++|+|++ +| .++.+++|+.|+|++|+|++.+ |..+..+++|+.|+|++|++++.+|..
T Consensus 484 ~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 484 ALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred cCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 77777777777777775 56 6777777777777777777665 777777777777777777777776644
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.2e-19 Score=200.04 Aligned_cols=179 Identities=20% Similarity=0.169 Sum_probs=130.6
Q ss_pred ccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcc-cccccceeccccccccccchhhhcCCCCCCeEEeec
Q 001908 349 TDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIG-QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSS 427 (997)
Q Consensus 349 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 427 (997)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..|. ++++|++|+|++|+|++..|..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57889999998 5777665 4689999999999998888888 999999999999999988888999999999999999
Q ss_pred CcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccc
Q 001908 428 NHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEI 507 (997)
Q Consensus 428 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 507 (997)
|+|++..+..|.++++|++|+|++|++++..|..+..+++| +.|+|++|+|++..+..|..
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L-~~L~L~~N~l~~l~~~~~~~------------------ 158 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQL-QKLYLSQNQISRFPVELIKD------------------ 158 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCCSCCGGGTC-------------------
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccC-CEEECCCCcCCeeCHHHhcC------------------
Confidence 99998888889999999999999999875545445444444 44444444444322222200
Q ss_pred cccccCCcCccEEEccCccccccCChhccccCc--CCeeeCcccccc
Q 001908 508 PVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKS--IKELDLSCNNLS 552 (997)
Q Consensus 508 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 552 (997)
+..+++|+.|+|++|+|++..+..+..++. |+.|+|++|.+.
T Consensus 159 ---~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 159 ---GNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp ------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred ---cccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 034555666666666665444445555554 366666666665
No 367
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.3e-19 Score=222.06 Aligned_cols=200 Identities=20% Similarity=0.237 Sum_probs=101.6
Q ss_pred ccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCC
Q 001908 353 MGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQG 432 (997)
Q Consensus 353 l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 432 (997)
+..|.+. ..|..|..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|++|+|+
T Consensus 208 ~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~- 283 (727)
T 4b8c_D 208 DIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT- 283 (727)
T ss_dssp ---------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-
T ss_pred cccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-
Confidence 3344444 55667777777888888888877 56666667777888888888777 67777777777777777777777
Q ss_pred CCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccc-cceeccccccccccccccc
Q 001908 433 NIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKN-LVALYISGNQFSGEIPVTL 511 (997)
Q Consensus 433 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~ 511 (997)
.+|..|+++++|++|+|++|.|+ .+|..+..+++| +.|+|++|.|++.+|..+..+.. +..|+|++|.++|.+|..
T Consensus 284 ~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L-~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~- 360 (727)
T 4b8c_D 284 SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNL-QFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE- 360 (727)
T ss_dssp SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTC-CCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-
T ss_pred ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCc-cEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc-
Confidence 66777777777777777777775 666666666666 66777777776666666554322 233666777776666643
Q ss_pred cCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 512 TGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
|..|++++|... -. ..+.|.+..+..+..+..+....+++|-+.+...
T Consensus 361 -----l~~l~l~~n~~~---~~-------------~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~ 408 (727)
T 4b8c_D 361 -----RRFIEINTDGEP---QR-------------EYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYA 408 (727)
T ss_dssp --------------------------------------------------------------CCCGGGC
T ss_pred -----cceeEeeccccc---cc-------------ccCCccccccchhhcccccceeeeeccccccccC
Confidence 344455555100 00 1113333444455566666677777777765443
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.76 E-value=2.6e-18 Score=178.98 Aligned_cols=110 Identities=20% Similarity=0.186 Sum_probs=63.8
Q ss_pred ccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEee
Q 001908 347 TMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLS 426 (997)
Q Consensus 347 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 426 (997)
+|+.|++++|+|++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|+|++..|..|..+++|+.|+|+
T Consensus 58 ~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 137 (220)
T 2v70_A 58 QLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLY 137 (220)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECT
T ss_pred CCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECC
Confidence 44444444444444444555555666666666666665555555666666666666666665555556666666666666
Q ss_pred cCcCCCCCCCCCCCCCCCcEEecCCCcccC
Q 001908 427 SNHLQGNIPPSLGNCKNLVSLNLSDNKLIG 456 (997)
Q Consensus 427 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 456 (997)
+|+|++..|..|..+++|++|+|++|.+.+
T Consensus 138 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c 167 (220)
T 2v70_A 138 DNQITTVAPGAFDTLHSLSTLNLLANPFNC 167 (220)
T ss_dssp TSCCCCBCTTTTTTCTTCCEEECCSCCEEC
T ss_pred CCcCCEECHHHhcCCCCCCEEEecCcCCcC
Confidence 666665555566666666666666665553
No 369
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=5.8e-18 Score=177.60 Aligned_cols=135 Identities=25% Similarity=0.226 Sum_probs=78.2
Q ss_pred CCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEec
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNL 449 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 449 (997)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 55666666666666555556666666666666666665444445556666666666666666555555555666666666
Q ss_pred CCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccc
Q 001908 450 SDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRG 529 (997)
Q Consensus 450 ~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 529 (997)
++|+++ .+ |..+..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.+
T Consensus 120 s~N~l~-~l-------------------------p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 120 CCNKLT-EL-------------------------PRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CSSCCC-SC-------------------------CTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred cCCccc-cc-------------------------CcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 665554 33 4444455555556666666554444455556666666666666654
Q ss_pred c
Q 001908 530 S 530 (997)
Q Consensus 530 ~ 530 (997)
.
T Consensus 174 ~ 174 (229)
T 3e6j_A 174 E 174 (229)
T ss_dssp T
T ss_pred C
Confidence 3
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1e-18 Score=177.95 Aligned_cols=133 Identities=26% Similarity=0.323 Sum_probs=77.8
Q ss_pred cccccCCCcccCCCcc-ccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcc
Q 001908 470 RFLDLGNNHLNGSLPL-EVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSC 548 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 548 (997)
+.|++++|++++..+. .|+.+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 32 ~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (192)
T 1w8a_A 32 TELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYD 111 (192)
T ss_dssp SEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCS
T ss_pred CEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 4444444444433332 355666666666666666666666666666666666666666666666666666666666666
Q ss_pred ccccccCchhccCCCCCCEEeCCCCcCcccCCCCCcCCCCcceeecCCCCcCCC
Q 001908 549 NNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKGVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 549 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~ 602 (997)
|+|++.+|..+..+++|++|+|++|+|+|.++..+....+....+.++...|+.
T Consensus 112 N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~ 165 (192)
T 1w8a_A 112 NQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGA 165 (192)
T ss_dssp SCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCS
T ss_pred CcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCC
Confidence 666666666666666666667777766666553322112222334445555553
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.6e-18 Score=185.82 Aligned_cols=170 Identities=21% Similarity=0.290 Sum_probs=101.5
Q ss_pred CCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEe
Q 001908 369 LVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLN 448 (997)
Q Consensus 369 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 448 (997)
+.++..+++++|.+++.. .+..+++|++|++++|.++ .+| .+..+++|+.|+|++|+|++..+ +.++++|++|+
T Consensus 18 l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 444555555555555322 3455555555555555555 233 45555555555555555553322 55555555555
Q ss_pred cCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCcccc
Q 001908 449 LSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFR 528 (997)
Q Consensus 449 L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 528 (997)
|++|+++ + +|.. .. ++|+.|+|++|++++ ++ .+..+++|+.|+|++|+++
T Consensus 92 L~~N~l~-------------------------~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~ 141 (263)
T 1xeu_A 92 VNRNRLK-------------------------N-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLK 141 (263)
T ss_dssp CCSSCCS-------------------------C-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCC
T ss_pred CCCCccC-------------------------C-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCC
Confidence 5555544 2 2211 11 567777777777764 33 4777777777777777777
Q ss_pred ccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCccc
Q 001908 529 GSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 529 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~ 578 (997)
+. | .+..+++|+.|+|++|++++. ..+..+++|+.|++++|++++.
T Consensus 142 ~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 142 SI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp BC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 43 3 577777777777777777755 5677777788888888877765
No 372
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=3.4e-18 Score=174.94 Aligned_cols=82 Identities=18% Similarity=0.239 Sum_probs=34.3
Q ss_pred ccccceeccccccccccccccccCCcCccEEEccCcc-ccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEE
Q 001908 490 LKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNS-FRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYL 568 (997)
Q Consensus 490 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 568 (997)
+++|++|++++|++++..|..+..+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|++|
T Consensus 111 l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L 186 (197)
T 4ezg_A 111 LTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQL 186 (197)
T ss_dssp CTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEE
T ss_pred CCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEE
Confidence 3334444444444443333444444444444444443 22 233 34444444444444444443 22 34444445555
Q ss_pred eCCCCcC
Q 001908 569 NLSYNHF 575 (997)
Q Consensus 569 ~ls~N~l 575 (997)
++++|++
T Consensus 187 ~l~~N~i 193 (197)
T 4ezg_A 187 YAFSQTI 193 (197)
T ss_dssp EECBC--
T ss_pred EeeCccc
Confidence 5555544
No 373
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.74 E-value=1.9e-18 Score=185.22 Aligned_cols=167 Identities=20% Similarity=0.302 Sum_probs=114.5
Q ss_pred cccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEe
Q 001908 346 TTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFL 425 (997)
Q Consensus 346 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 425 (997)
..+..+++++|.+++.. .+..+++|++|++++|+++. +| .+..+++|++|+|++|+|++..| +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45777888888887543 67889999999999999984 55 78899999999999999996544 999999999999
Q ss_pred ecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccc
Q 001908 426 SSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSG 505 (997)
Q Consensus 426 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 505 (997)
++|++++ +|.... ++|++|+|++|++++ +| .+..++++ +.|+|++|++++. | .+..+++|+.|+|++|++++
T Consensus 93 ~~N~l~~-l~~~~~--~~L~~L~L~~N~l~~-~~-~l~~l~~L-~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~ 164 (263)
T 1xeu_A 93 NRNRLKN-LNGIPS--ACLSRLFLDNNELRD-TD-SLIHLKNL-EILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITN 164 (263)
T ss_dssp CSSCCSC-CTTCCC--SSCCEEECCSSCCSB-SG-GGTTCTTC-CEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCB
T ss_pred CCCccCC-cCcccc--CcccEEEccCCccCC-Ch-hhcCcccc-cEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcc
Confidence 9999996 444332 888888888888863 22 34444444 5555555555532 2 34445555555555555543
Q ss_pred cccccccCCcCccEEEccCcccc
Q 001908 506 EIPVTLTGCTGLEIFHMQGNSFR 528 (997)
Q Consensus 506 ~~p~~~~~l~~L~~L~Ls~N~l~ 528 (997)
. ..+..+++|+.|++++|+++
T Consensus 165 ~--~~l~~l~~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 165 T--GGLTRLKKVNWIDLTGQKCV 185 (263)
T ss_dssp C--TTSTTCCCCCEEEEEEEEEE
T ss_pred h--HHhccCCCCCEEeCCCCccc
Confidence 3 33444444444444444444
No 374
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=5.9e-18 Score=173.17 Aligned_cols=156 Identities=15% Similarity=0.238 Sum_probs=134.8
Q ss_pred CcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccccc
Q 001908 389 EIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTL 468 (997)
Q Consensus 389 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~l 468 (997)
..+.+++|++|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..++++
T Consensus 39 ~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L 114 (197)
T 4ezg_A 39 TEAQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSL 114 (197)
T ss_dssp BHHHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTC
T ss_pred ChhhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCC
Confidence 3467889999999999998 566 6899999999999999776 34578899999999999999998888899999998
Q ss_pred ccccccCCCcccCCCccccccccccceecccccc-ccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCc
Q 001908 469 SRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQ-FSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLS 547 (997)
Q Consensus 469 l~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (997)
++|++++|++++..|..++.+++|++|++++|+ ++ .+| .+..+++|+.|++++|++++ ++ .+..+++|+.|+++
T Consensus 115 -~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~ 189 (197)
T 4ezg_A 115 -TLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAF 189 (197)
T ss_dssp -CEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEEC
T ss_pred -CEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEee
Confidence 999999999998888999999999999999998 55 666 78999999999999999985 44 78899999999999
Q ss_pred cccccc
Q 001908 548 CNNLSG 553 (997)
Q Consensus 548 ~N~l~~ 553 (997)
+|++.+
T Consensus 190 ~N~i~~ 195 (197)
T 4ezg_A 190 SQTIGG 195 (197)
T ss_dssp BC----
T ss_pred CcccCC
Confidence 999864
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=9.3e-18 Score=170.82 Aligned_cols=175 Identities=19% Similarity=0.230 Sum_probs=111.1
Q ss_pred CeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccc-ccccccccccccccCCCcccCCCccccccccccceeccc
Q 001908 421 TDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQ-QILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYIS 499 (997)
Q Consensus 421 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 499 (997)
+.+++++|+++ .+|..+.. +|++|++++|++++..+. .+..++++ ++|+|++|+|++..|..|.++++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHL-VKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTC-CEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCC-CEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 45555555554 34444332 566666666666543333 25555555 666666666666667777777777777888
Q ss_pred cccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchh-ccCCCCCCEEeCCCCcCccc
Q 001908 500 GNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEF-LENLSFLEYLNLSYNHFDGE 578 (997)
Q Consensus 500 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~ls~N~l~~~ 578 (997)
+|+|++..|..|.++++|++|+|++|+|++.+|..|..+++|+.|+|++|.+++..+.. +. ..++...+..+...+.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~--~~l~~~~~~~~~~~C~ 164 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFA--EWLRKKSLNGGAARCG 164 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHH--HHHHHHCCSGGGCBBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHH--HHHHHcCCCCCCCCCC
Confidence 88777777777777788888888888888777777888888888888888887665421 11 1122234455555555
Q ss_pred CCCCCcCCCCcceeecCCCCcCCCC
Q 001908 579 VPTKGVFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 579 ~p~~~~~~~~~~~~~~~N~~~C~~~ 603 (997)
.|.. +.......+..+...|.+.
T Consensus 165 ~P~~--l~~~~l~~l~~~~~~C~~~ 187 (192)
T 1w8a_A 165 APSK--VRDVQIKDLPHSEFKCSSE 187 (192)
T ss_dssp SSTT--TTTSBGGGSCTTTCCCCCC
T ss_pred CChH--HcCCChhhCcHhhcCcCCC
Confidence 5543 5555666677777778644
No 376
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=6.6e-18 Score=180.51 Aligned_cols=138 Identities=20% Similarity=0.168 Sum_probs=107.6
Q ss_pred cCccCCcccccCcceEEEEEECCCCcE--EEEEEecccch------------------------hhHHHHHHHHHHHhhc
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTF--VAVKILNLMQK------------------------GALKSFVAECEVLRNT 733 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~--vAvK~~~~~~~------------------------~~~~~~~~E~~~l~~l 733 (997)
-|.+.+.||+|+||.||+|.+..+|+. ||||+++.... .....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999668888 99999753211 1123678999999999
Q ss_pred CCCCc--ceEEeeeeccCcCCCceEEEEEeeccC-C----CHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHh-h
Q 001908 734 RHRNL--IKIITVCSSIDFKGADFKALVYEYMQN-G----SLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLH-H 805 (997)
Q Consensus 734 ~h~ni--v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH-~ 805 (997)
+|+++ +..+++ ...++||||+.+ | +|.++.... ++..+..++.|++.|+.||| +
T Consensus 128 ~~~~i~~p~~~~~---------~~~~lVmE~~g~~g~~~~~L~~~~~~~---------~~~~~~~i~~qi~~~l~~lH~~ 189 (258)
T 1zth_A 128 KEAGVSVPQPYTY---------MKNVLLMEFIGEDELPAPTLVELGREL---------KELDVEGIFNDVVENVKRLYQE 189 (258)
T ss_dssp HHTTCCCCCEEEE---------ETTEEEEECCEETTEECCBHHHHGGGG---------GGSCHHHHHHHHHHHHHHHHHT
T ss_pred HhCCCCCCeEEEc---------CCCEEEEEecCCCCCccccHHHHhhcc---------ChHHHHHHHHHHHHHHHHHHHH
Confidence 88764 344432 246899999942 4 787765431 12356788999999999999 8
Q ss_pred CCCCCcEecCCCCCCeeeCCCCcEEEcccccchhc
Q 001908 806 HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFL 840 (997)
Q Consensus 806 ~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~ 840 (997)
. +|+||||||+|||++. .++|+|||+|...
T Consensus 190 ~---givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 190 A---ELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp S---CEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred C---CEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 8 9999999999999988 9999999999653
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.71 E-value=1.2e-17 Score=185.66 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=150.5
Q ss_pred ccccceeeccccccc--CcCcCccCcch---hhhhhccCccccccCCCcccCCCccceeeccCCCCCCCCCccccccCCC
Q 001908 170 WLKLEHISLARNHLT--GMLPASIGNLS---IIYLHVGENQFSGTVPPSLYNMSSLENILLDVNGFTGNLPLDIGVTLPN 244 (997)
Q Consensus 170 l~~L~~L~L~~N~l~--g~~p~~~~~l~---~~~L~l~~N~l~g~ip~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~ 244 (997)
+++|++|||++|++. ...+..+.... .....+..+.|.+.+|..+.+|++|+.|+|.. +++ .|+...|.++++
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~ 125 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDN 125 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTT
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-ccc-chhHHHhhcCcc
Confidence 456788888888887 22222222200 01112333334444444444488888888887 776 677777777888
Q ss_pred ccEEEecCCcCcCCCCCCCCCCCCCcEEeccCc----cCCCcccccccccCccC-eeEccCccCCCCCCCCcchhhhhcc
Q 001908 245 LQVFAIGDNYFSGSIPESFSNASNIEIIDLPIN----YFTGKVSIIFGRLKNLW-SLDLGINNLGSGGANDLDFVTILTN 319 (997)
Q Consensus 245 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N----~l~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~~~~~~~~~~l~~ 319 (997)
|+.+++++|.++...+.+|.++.++..+.+..+ .........|.++.+|+ .+++.... .++. .....-..
T Consensus 126 L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~--~l~~---~~~~~~~~ 200 (329)
T 3sb4_A 126 LKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMG--KLED---EIMKAGLQ 200 (329)
T ss_dssp CCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTC--CHHH---HHHHTTCC
T ss_pred cceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCC--cHHH---HHhhcccC
Confidence 888888888777666777777777777766653 22333344555555555 34333211 0000 00000112
Q ss_pred CCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccc-e
Q 001908 320 CSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQ-A 398 (997)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~ 398 (997)
..+++.+.+.++-.. .....+....++|+.+++++|+++.+.+.+|.++++|+.++|.+| ++.+.+.+|.++++|+ .
T Consensus 201 ~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~ 278 (329)
T 3sb4_A 201 PRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGT 278 (329)
T ss_dssp GGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEE
T ss_pred ccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEE
Confidence 344555555544211 111111111245666666666666555566666666666666666 5555556666666666 6
Q ss_pred eccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEe
Q 001908 399 IGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLN 448 (997)
Q Consensus 399 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 448 (997)
+++.+ .++...+.+|.++++|+.|++++|+++...+.+|.++++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66666 55545556666666666666666666655555666666666665
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.67 E-value=4e-17 Score=181.41 Aligned_cols=194 Identities=10% Similarity=0.069 Sum_probs=95.5
Q ss_pred CCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecC----cCCCCCCCCCCCCCCC
Q 001908 369 LVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN----HLQGNIPPSLGNCKNL 444 (997)
Q Consensus 369 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N----~l~~~~p~~~~~l~~L 444 (997)
+++|+.|+|.+ +++.+.+.+|.++++|+.|++++|.++...+..|.++.++..+.+..+ .........|.++.+|
T Consensus 100 ~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L 178 (329)
T 3sb4_A 100 KQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPL 178 (329)
T ss_dssp CTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCC
T ss_pred cCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhcccccccccccccccc
Confidence 66666666666 666555556666666666666666666555555665555544444432 1222333445555555
Q ss_pred c-EEecCCCcccCCcccccc----------------------------cccccccccccCCCcccCCCccccccccccce
Q 001908 445 V-SLNLSDNKLIGAVPQQIL----------------------------TITTLSRFLDLGNNHLNGSLPLEVGNLKNLVA 495 (997)
Q Consensus 445 ~-~L~L~~N~l~~~~p~~~~----------------------------~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~ 495 (997)
+ .+.+.... .++..+. .+.++ +.++|++|+++...+..|.++++|+.
T Consensus 179 ~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L-~~l~L~~n~i~~I~~~aF~~~~~L~~ 254 (329)
T 3sb4_A 179 ETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNL-VSLDISKTNATTIPDFTFAQKKYLLK 254 (329)
T ss_dssp EEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTC-CEEECTTBCCCEECTTTTTTCTTCCE
T ss_pred ceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCC-eEEECCCCCcceecHhhhhCCCCCCE
Confidence 5 34333221 1222111 12333 44555555555444444555555555
Q ss_pred eccccccccccccccccCCcCcc-EEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEe
Q 001908 496 LYISGNQFSGEIPVTLTGCTGLE-IFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLN 569 (997)
Q Consensus 496 L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 569 (997)
|+|++| ++...+.+|.+|.+|+ .+++.+ +++...+.+|.++++|+.|++++|+++...+.+|.++++|+.++
T Consensus 255 l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 255 IKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 555554 4433344455555555 555554 44433344555555555555555555544444555555555443
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=5.3e-17 Score=165.16 Aligned_cols=130 Identities=25% Similarity=0.283 Sum_probs=93.2
Q ss_pred EEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCc
Q 001908 446 SLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGN 525 (997)
Q Consensus 446 ~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 525 (997)
.+++++|.++ .+|..+. .++ +.|+|++|+|+ .+|..|.++++|+.|+|++|+|++..+..|.++++|+.|+|++|
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l-~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDV-TELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTC-CEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEEcCCCCCC-cCCCCCC--CCC-CEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 4444444444 3443322 223 55566666665 55667777778888888888888777777888888888888888
Q ss_pred cccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 526 SFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 526 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|.+...
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 8887777788888888888888888886666678888888888888888877554
No 380
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=5.3e-16 Score=157.74 Aligned_cols=130 Identities=22% Similarity=0.325 Sum_probs=118.2
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.+++++|.++ .+|..+. ++|++|+|++|+++ .+|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56899999999 6776653 68999999999998 88899999999999999999999888889999999999999999
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCCC-CCcCCCCcceeecCCCCcCCCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT-KGVFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~N~~~C~~~ 603 (997)
+|++..|..|..+++|++|+|++|++++..+. ...++++..+++.+|||.|+|.
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~ 143 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCN 143 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCc
Confidence 99998889999999999999999999977664 3567889999999999999763
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=4.5e-16 Score=154.65 Aligned_cols=133 Identities=22% Similarity=0.247 Sum_probs=84.7
Q ss_pred CCCCeEEeecCcCC-CCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCcccccccccccee
Q 001908 418 TLMTDLFLSSNHLQ-GNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVAL 496 (997)
Q Consensus 418 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L 496 (997)
++|+.|+|++|+++ +.+|..+..+++|++|++++|.++ +. ..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~-------------------------~~--~~~~~l~~L~~L 76 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI-------------------------SV--SNLPKLPKLKKL 76 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC-------------------------CC--SSCCCCSSCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC-------------------------Ch--hhhccCCCCCEE
Confidence 55666666666665 455555555555555555555554 22 345556667777
Q ss_pred ccccccccccccccccCCcCccEEEccCccccccC-ChhccccCcCCeeeCccccccccCc---hhccCCCCCCEEeCCC
Q 001908 497 YISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI-PLSLRSLKSIKELDLSCNNLSGQIP---EFLENLSFLEYLNLSY 572 (997)
Q Consensus 497 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls~ 572 (997)
++++|++++.+|..+..+++|+.|+|++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++
T Consensus 77 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 77 ELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp EEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 77777776556666666777777777777776432 2566777777777777777775444 4677777777777777
Q ss_pred CcCcc
Q 001908 573 NHFDG 577 (997)
Q Consensus 573 N~l~~ 577 (997)
|.+..
T Consensus 157 n~~~~ 161 (168)
T 2ell_A 157 REDQE 161 (168)
T ss_dssp TTSCB
T ss_pred CChhh
Confidence 77663
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=5.2e-16 Score=154.22 Aligned_cols=132 Identities=24% Similarity=0.183 Sum_probs=76.1
Q ss_pred CCCCEEeccCCCCC-CCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEe
Q 001908 370 VNLNLLGIEFNQLT-GNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLN 448 (997)
Q Consensus 370 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 448 (997)
++|+.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++++.+|..+.++++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 56777777777776 56666677777777777777777654 5666677777777777777665666665666666666
Q ss_pred cCCCcccCCc-ccccccccccccccccCCCcccCCCc---cccccccccceecccccccc
Q 001908 449 LSDNKLIGAV-PQQILTITTLSRFLDLGNNHLNGSLP---LEVGNLKNLVALYISGNQFS 504 (997)
Q Consensus 449 L~~N~l~~~~-p~~~~~l~~ll~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~ 504 (997)
|++|++++.. +..+..++++ +.|++++|.+++..+ ..+..+++|++|++++|.+.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L-~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECL-KSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCC-CEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred ccCCccCcchhHHHHhcCCCC-CEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 6666665321 1333333333 344444444442222 23444444444444444443
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=1.1e-15 Score=153.20 Aligned_cols=112 Identities=24% Similarity=0.253 Sum_probs=86.9
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.|++++|++++..+..|..+++|++|++++|++++..+..|.++++|+.|+|++|++++..+..|..+++|+.|+|++|
T Consensus 31 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 110 (177)
T 2o6r_A 31 TRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN 110 (177)
T ss_dssp SEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCC
Confidence 55556666665555556677788888888888888666666788888888888888888777777888888888888888
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
++++..+..+..+++|++|+|++|++++.+|.
T Consensus 111 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 111 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred cceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 88876666678888888888888888887763
No 384
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=5.5e-16 Score=150.65 Aligned_cols=128 Identities=22% Similarity=0.304 Sum_probs=79.0
Q ss_pred CCCCCeEEeecCcCC-CCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccce
Q 001908 417 LTLMTDLFLSSNHLQ-GNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVA 495 (997)
Q Consensus 417 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~ 495 (997)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. . .++.+++|++
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~-------------------------~~~~l~~L~~ 68 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--A-------------------------NLPKLNKLKK 68 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--T-------------------------TCCCCTTCCE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--h-------------------------hhhcCCCCCE
Confidence 356777777777776 66777777777777777777776533 3 3444555555
Q ss_pred eccccccccccccccccCCcCccEEEccCcccccc-CChhccccCcCCeeeCccccccccCc---hhccCCCCCCEEeCC
Q 001908 496 LYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGS-IPLSLRSLKSIKELDLSCNNLSGQIP---EFLENLSFLEYLNLS 571 (997)
Q Consensus 496 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~ls 571 (997)
|++++|++++.+|..+..+++|+.|++++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|++||++
T Consensus 69 L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 69 LELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp EECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred EECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 66666666554555555556666666666666542 23556666666666666666665444 356666666666665
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=7.8e-16 Score=149.60 Aligned_cols=129 Identities=18% Similarity=0.162 Sum_probs=95.3
Q ss_pred cccccceecccccccc-ccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccccccc
Q 001908 392 QLRNLQAIGLSSNFLQ-GNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSR 470 (997)
Q Consensus 392 ~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~ 470 (997)
..++|++|++++|.++ +.+|..+..+++|+.|++++|++++. ..+.++++|++|++++|++++.+|..+.
T Consensus 15 ~~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~------- 85 (149)
T 2je0_A 15 TPSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAE------- 85 (149)
T ss_dssp CGGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHH-------
T ss_pred CCccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhh-------
Confidence 3478999999999999 78999999999999999999999975 7889999999999999988755554444
Q ss_pred ccccCCCcccCCCccccccccccceecccccccccc-ccccccCCcCccEEEccCccccccCC---hhccccCcCCeeeC
Q 001908 471 FLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE-IPVTLTGCTGLEIFHMQGNSFRGSIP---LSLRSLKSIKELDL 546 (997)
Q Consensus 471 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~L 546 (997)
.+++|++|++++|++++. .|..+..+++|+.|++++|++++..+ ..+..+++|+.||+
T Consensus 86 ------------------~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l 147 (149)
T 2je0_A 86 ------------------KCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDG 147 (149)
T ss_dssp ------------------HCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETT
T ss_pred ------------------hCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccC
Confidence 344555555555555532 23556666666666666666665444 45666777777776
Q ss_pred c
Q 001908 547 S 547 (997)
Q Consensus 547 s 547 (997)
+
T Consensus 148 ~ 148 (149)
T 2je0_A 148 Y 148 (149)
T ss_dssp B
T ss_pred C
Confidence 5
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=8.7e-15 Score=146.70 Aligned_cols=132 Identities=20% Similarity=0.224 Sum_probs=97.3
Q ss_pred cEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceecccc
Q 001908 324 KVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSS 403 (997)
Q Consensus 324 ~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~ 403 (997)
+.+++++|+++. +|..+. ++++.|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++
T Consensus 10 ~~l~~~~~~l~~-~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 10 TEIRCNSKGLTS-VPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TEEECCSSCCSS-CCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CEEEecCCCCcc-CCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 445555555552 333222 4566667777777766666778888888888888888877777778888888888888
Q ss_pred ccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcc
Q 001908 404 NFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVP 459 (997)
Q Consensus 404 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 459 (997)
|+|++..+..+..+++|++|+|++|++++..+..|..+++|++|+|++|.+.+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 88887766777888888888888888887666667788888888888888876544
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=2.9e-14 Score=161.88 Aligned_cols=223 Identities=13% Similarity=0.107 Sum_probs=127.8
Q ss_pred cccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCc
Q 001908 213 SLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKN 292 (997)
Q Consensus 213 ~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 292 (997)
.|.++ +|+.+.|..| ++ .|+...|.+ .+|+.+.+.+ .++..-+.+|.++++|+.++|++|+++.+....|. ..+
T Consensus 131 aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~ 204 (401)
T 4fdw_A 131 AFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAG 204 (401)
T ss_dssp TTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCC
T ss_pred hcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecc
Confidence 34443 5777776655 44 566666655 3577777764 55555556677777777777777777766666666 467
Q ss_pred cCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCC
Q 001908 293 LWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNL 372 (997)
Q Consensus 293 L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L 372 (997)
|+.+.|.. +++.++.. .|.++++|+.+++..| ++.....+|.+ ..|+.+.+ .|.++.+...+|.++++|
T Consensus 205 L~~l~lp~-~l~~I~~~------aF~~~~~L~~l~l~~~-l~~I~~~aF~~--~~L~~i~l-p~~i~~I~~~aF~~c~~L 273 (401)
T 4fdw_A 205 IEEVLLPV-TLKEIGSQ------AFLKTSQLKTIEIPEN-VSTIGQEAFRE--SGITTVKL-PNGVTNIASRAFYYCPEL 273 (401)
T ss_dssp CSEEECCT-TCCEECTT------TTTTCTTCCCEECCTT-CCEECTTTTTT--CCCSEEEE-ETTCCEECTTTTTTCTTC
T ss_pred cCEEEeCC-chheehhh------HhhCCCCCCEEecCCC-ccCcccccccc--CCccEEEe-CCCccEEChhHhhCCCCC
Confidence 77777763 35555443 3456667777776654 34333334443 34555555 334444445566666666
Q ss_pred CEEeccCCCCC-----CCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEE
Q 001908 373 NLLGIEFNQLT-----GNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSL 447 (997)
Q Consensus 373 ~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 447 (997)
+.+++.+|.+. .+.+..|.++++|+.++|. |.++.....+|.++++|+.++|.+| ++...+.+|.++ +|+.+
T Consensus 274 ~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 274 AEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp CEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred CEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 66666655543 2334555566666666665 3354444455555566666666333 444444555555 56666
Q ss_pred ecCCCccc
Q 001908 448 NLSDNKLI 455 (997)
Q Consensus 448 ~L~~N~l~ 455 (997)
++++|.+.
T Consensus 351 ~l~~n~~~ 358 (401)
T 4fdw_A 351 KVEGTTPP 358 (401)
T ss_dssp EECCSSCC
T ss_pred EEcCCCCc
Confidence 66555544
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=8.4e-17 Score=164.69 Aligned_cols=131 Identities=27% Similarity=0.323 Sum_probs=64.7
Q ss_pred ccccceeccccccccccchh------hhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccc
Q 001908 393 LRNLQAIGLSSNFLQGNIPS------SLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTIT 466 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 466 (997)
...++.++++.|.++|.+|. .+..+++|+.|+|++|++++ +| .+.++++|++|++++|+++ .+|..+..++
T Consensus 17 ~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~ 93 (198)
T 1ds9_A 17 RKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVAD 93 (198)
T ss_dssp TTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHH
T ss_pred cccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCC
Confidence 34455555555555554443 66666666666666666664 44 5566666666666666655 3444333333
Q ss_pred ccccccccCCCcccCCCccccccccccceecccccccccccc-ccccCCcCccEEEccCccccc
Q 001908 467 TLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIP-VTLTGCTGLEIFHMQGNSFRG 529 (997)
Q Consensus 467 ~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~ 529 (997)
++ +.|+|++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|++++
T Consensus 94 ~L-~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~ 154 (198)
T 1ds9_A 94 TL-EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYN 154 (198)
T ss_dssp HC-SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHH
T ss_pred cC-CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccc
Confidence 33 444444444442 22 34444444444444444442111 234444444444444444443
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.55 E-value=3.5e-15 Score=165.08 Aligned_cols=136 Identities=15% Similarity=0.188 Sum_probs=99.9
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccch--------------hhH--------HHHHHHHHHHhhcCCCC
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK--------------GAL--------KSFVAECEVLRNTRHRN 737 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~--------------~~~--------~~~~~E~~~l~~l~h~n 737 (997)
-|++.++||+|++|.||+|... +|+.||||+++.... ... ....+|...|.++.+.+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3889999999999999999986 799999998752110 001 11245666777775444
Q ss_pred cc--eEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecC
Q 001908 738 LI--KIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGD 815 (997)
Q Consensus 738 iv--~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrD 815 (997)
+. ..+++ ...++||||++|++|.++... .....++.|++.+|.|||+. ||||||
T Consensus 175 v~vp~p~~~---------~~~~LVME~i~G~~L~~l~~~------------~~~~~l~~qll~~l~~lH~~---gIVHrD 230 (397)
T 4gyi_A 175 FPVPEPIAQ---------SRHTIVMSLVDALPMRQVSSV------------PDPASLYADLIALILRLAKH---GLIHGD 230 (397)
T ss_dssp CSCCCEEEE---------ETTEEEEECCSCEEGGGCCCC------------SCHHHHHHHHHHHHHHHHHT---TEECSC
T ss_pred CCCCeeeec---------cCceEEEEecCCccHhhhccc------------HHHHHHHHHHHHHHHHHHHC---CCcCCC
Confidence 32 22222 124799999999888654321 12346789999999999998 999999
Q ss_pred CCCCCeeeCCCC----------cEEEcccccchhc
Q 001908 816 LKPSNVLLDHDM----------VAHVSDFGLARFL 840 (997)
Q Consensus 816 lk~~NIll~~~~----------~~kl~DFg~a~~~ 840 (997)
|||.|||+++++ .+.|+||+.+...
T Consensus 231 LKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 231 FNEFNILIREEKDAEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp CSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEET
T ss_pred CCHHHEEEeCCCCcccccccccceEEEEeCCcccC
Confidence 999999999877 4899999987643
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=4.7e-14 Score=160.09 Aligned_cols=265 Identities=12% Similarity=0.140 Sum_probs=148.8
Q ss_pred CccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeE
Q 001908 218 SSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLD 297 (997)
Q Consensus 218 ~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 297 (997)
..++.+.+.+ .++ .|+...|.+ .+|+.+.+.+| ++..-..+|.++ +|+.+++.. .++.+.+.+|.++++|+.++
T Consensus 113 ~~l~~i~ip~-~i~-~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~ 186 (401)
T 4fdw_A 113 KGYNEIILPN-SVK-SIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKAD 186 (401)
T ss_dssp SSCSEEECCT-TCC-EECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEE
T ss_pred CCccEEEECC-ccC-EehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeee
Confidence 3444444432 233 445554544 24555555544 443444445553 455555553 44444455555555555555
Q ss_pred ccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEec
Q 001908 298 LGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGI 377 (997)
Q Consensus 298 Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L 377 (997)
|+.|+++.++.. .|. . ..|+.+.+.. .++.+...+|.++++|+.+++
T Consensus 187 l~~n~l~~I~~~------------------------------aF~-~-~~L~~l~lp~-~l~~I~~~aF~~~~~L~~l~l 233 (401)
T 4fdw_A 187 LSKTKITKLPAS------------------------------TFV-Y-AGIEEVLLPV-TLKEIGSQAFLKTSQLKTIEI 233 (401)
T ss_dssp CTTSCCSEECTT------------------------------TTT-T-CCCSEEECCT-TCCEECTTTTTTCTTCCCEEC
T ss_pred cCCCcceEechh------------------------------hEe-e-cccCEEEeCC-chheehhhHhhCCCCCCEEec
Confidence 555555444332 222 1 2344444432 244455567777777777777
Q ss_pred cCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCC-----CCCCCCCCCCCCCcEEecCCC
Q 001908 378 EFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQ-----GNIPPSLGNCKNLVSLNLSDN 452 (997)
Q Consensus 378 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~L~~N 452 (997)
..| ++.+-..+|.+ .+|+.+.| .|.++...+.+|.++++|+.+++.+|.+. ...+.+|.++++|+.++|.+
T Consensus 234 ~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~- 309 (401)
T 4fdw_A 234 PEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE- 309 (401)
T ss_dssp CTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-
T ss_pred CCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-
Confidence 754 55455566666 66777777 34455455667777777777777776664 34455666666666666653
Q ss_pred cccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCC
Q 001908 453 KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIP 532 (997)
Q Consensus 453 ~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 532 (997)
.++ .....+|.++++|+.++|..| ++..-+.+|.++ +|+.+++++|.+....+
T Consensus 310 ~i~-------------------------~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~ 362 (401)
T 4fdw_A 310 SIR-------------------------ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFE 362 (401)
T ss_dssp TCC-------------------------EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCC
T ss_pred ceE-------------------------EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccccc
Confidence 233 233445666666666666444 554445567777 77777777776665555
Q ss_pred hhccccC-cCCeeeCcccccc
Q 001908 533 LSLRSLK-SIKELDLSCNNLS 552 (997)
Q Consensus 533 ~~~~~l~-~L~~L~Ls~N~l~ 552 (997)
..|.+++ .++.|++..|.+.
T Consensus 363 ~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 363 KVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp SSCCCSCTTCCEEEECGGGHH
T ss_pred ccccCCCCCccEEEeCHHHHH
Confidence 6666663 5667777666543
No 391
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=5.8e-17 Score=165.87 Aligned_cols=155 Identities=24% Similarity=0.284 Sum_probs=120.3
Q ss_pred hcCCCCCCeEEeecCcCCCCCCC------CCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCcccc
Q 001908 414 LGNLTLMTDLFLSSNHLQGNIPP------SLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEV 487 (997)
Q Consensus 414 ~~~l~~L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~ 487 (997)
+.....++.++++.|.++|.+|. .|..+++|++|+|++|++++ +| .+..++++ ++|++++|+++ .+|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L-~~L~l~~n~l~-~l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENL-RILSLGRNLIK-KIENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTC-CEEEEEEEEEC-SCSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCC-CEEECCCCCcc-cccchh
Confidence 56667888889999999888877 78888888888888888875 66 77777777 88888888887 667777
Q ss_pred ccccccceeccccccccccccccccCCcCccEEEccCccccccCC-hhccccCcCCeeeCccccccccCchh--------
Q 001908 488 GNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIP-LSLRSLKSIKELDLSCNNLSGQIPEF-------- 558 (997)
Q Consensus 488 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~-------- 558 (997)
..+++|+.|++++|++++ +| .+..+++|+.|++++|++++..+ ..+..+++|+.|++++|.+++.+|..
T Consensus 90 ~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~ 167 (198)
T 1ds9_A 90 AVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRI 167 (198)
T ss_dssp HHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHH
T ss_pred hcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHH
Confidence 777888888888888874 45 57778888888888888874332 46778888888888888887766543
Q ss_pred --ccCCCCCCEEeCCCCcCc
Q 001908 559 --LENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 559 --~~~l~~L~~L~ls~N~l~ 576 (997)
+..+++|+.|| +|+++
T Consensus 168 ~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 168 EVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp HHHHHCSSCSEEC--CGGGT
T ss_pred HHHHhCCCcEEEC--CcccC
Confidence 67778888776 66665
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.9e-15 Score=146.46 Aligned_cols=132 Identities=18% Similarity=0.177 Sum_probs=80.2
Q ss_pred hcCCCCCCeEEeecCcCCCCCCCCCCCC-CCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccc
Q 001908 414 LGNLTLMTDLFLSSNHLQGNIPPSLGNC-KNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKN 492 (997)
Q Consensus 414 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~ 492 (997)
+.++++|+.|++++|+++. +|. +..+ ++|++|++++|.++ +. ..|..+++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~-------------------------~~--~~l~~l~~ 65 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIR-------------------------KL--DGFPLLRR 65 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCC-------------------------EE--CCCCCCSS
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCC-------------------------cc--cccccCCC
Confidence 4555666666666666663 333 2232 25555555555554 22 34555666
Q ss_pred cceeccccccccccccccccCCcCccEEEccCccccccCCh--hccccCcCCeeeCccccccccCchh----ccCCCCCC
Q 001908 493 LVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPL--SLRSLKSIKELDLSCNNLSGQIPEF----LENLSFLE 566 (997)
Q Consensus 493 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~ 566 (997)
|++|+|++|++++..|..|..+++|+.|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..+++|+
T Consensus 66 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~ 143 (176)
T 1a9n_A 66 LKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVR 143 (176)
T ss_dssp CCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCS
T ss_pred CCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccc
Confidence 667777777766444444566677777777777775 4454 6667777777777777776 34443 66777777
Q ss_pred EEeCCCCcCc
Q 001908 567 YLNLSYNHFD 576 (997)
Q Consensus 567 ~L~ls~N~l~ 576 (997)
.||+++|...
T Consensus 144 ~Ld~~~n~~~ 153 (176)
T 1a9n_A 144 VLDFQKVKLK 153 (176)
T ss_dssp EETTEECCHH
T ss_pred eeCCCcCCHH
Confidence 7777777664
No 393
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.5e-14 Score=144.88 Aligned_cols=135 Identities=14% Similarity=0.157 Sum_probs=96.0
Q ss_pred CCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccc
Q 001908 388 REIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITT 467 (997)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 467 (997)
..+.++.+|++|+|++|+++. +|......++|+.|+|++|+|++. ..|..+++|++|+|++|++++ +|.
T Consensus 13 ~~~~~~~~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~-~~~------- 81 (176)
T 1a9n_A 13 AQYTNAVRDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICR-IGE------- 81 (176)
T ss_dssp CEEECTTSCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCE-ECS-------
T ss_pred HhcCCcCCceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccc-cCc-------
Confidence 356778999999999999994 565333344999999999999964 678889999999999988873 332
Q ss_pred cccccccCCCcccCCCccccccccccceeccccccccccccc--cccCCcCccEEEccCccccccCCh----hccccCcC
Q 001908 468 LSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPV--TLTGCTGLEIFHMQGNSFRGSIPL----SLRSLKSI 541 (997)
Q Consensus 468 ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L 541 (997)
..|..+++|++|++++|+++ .+|. .+..+++|+.|++++|.++ .+|. .+..+++|
T Consensus 82 -----------------~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L 142 (176)
T 1a9n_A 82 -----------------GLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV 142 (176)
T ss_dssp -----------------CHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC
T ss_pred -----------------chhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc
Confidence 22344555666666666664 4444 5666666777777777766 3444 37777777
Q ss_pred CeeeCcccccc
Q 001908 542 KELDLSCNNLS 552 (997)
Q Consensus 542 ~~L~Ls~N~l~ 552 (997)
+.||+++|.+.
T Consensus 143 ~~Ld~~~n~~~ 153 (176)
T 1a9n_A 143 RVLDFQKVKLK 153 (176)
T ss_dssp SEETTEECCHH
T ss_pred ceeCCCcCCHH
Confidence 77777777765
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.49 E-value=4.2e-14 Score=140.52 Aligned_cols=109 Identities=21% Similarity=0.234 Sum_probs=90.4
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 56777777777 4665553 78888899999998877888888999999999999998777777888999999999999
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVPT 581 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 581 (997)
+|++..+..|..+++|++|+|++|+|++.++.
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99877777788999999999999999887763
No 395
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=3.9e-13 Score=153.13 Aligned_cols=312 Identities=12% Similarity=0.060 Sum_probs=156.5
Q ss_pred CcccCCCccceeeccCCCCCCCCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccC
Q 001908 212 PSLYNMSSLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLK 291 (997)
Q Consensus 212 ~~l~~l~~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 291 (997)
..|.++++|+.+.|.. .++ .|+...|.++++|+.+++.++ ++..-..+|.++.+|+.+.+..+ +......+|.+..
T Consensus 65 ~AF~~c~~L~~i~lp~-~i~-~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 65 AAFQGCRKVTEIKIPS-TVR-EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGCD 140 (394)
T ss_dssp TTTTTCTTEEEEECCT-TCC-EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTCC
T ss_pred HHhhCCCCceEEEeCC-Ccc-CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeeccc
Confidence 3466677777777753 354 566666666666666666544 44333455666666666655533 3334444555443
Q ss_pred ccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCC
Q 001908 292 NLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVN 371 (997)
Q Consensus 292 ~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~ 371 (997)
.+...... .+..++. ..|.++++|+.+.+.++. .......|.++.+
T Consensus 141 ~~~~~~~~--~~~~i~~------~aF~~c~~L~~i~l~~~~--------------------------~~I~~~~F~~c~~ 186 (394)
T 4fs7_A 141 FKEITIPE--GVTVIGD------EAFATCESLEYVSLPDSM--------------------------ETLHNGLFSGCGK 186 (394)
T ss_dssp CSEEECCT--TCCEECT------TTTTTCTTCCEEECCTTC--------------------------CEECTTTTTTCTT
T ss_pred ccccccCc--cccccch------hhhcccCCCcEEecCCcc--------------------------ceeccccccCCCC
Confidence 32222211 1111111 234556666666554332 1123344555555
Q ss_pred CCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCC
Q 001908 372 LNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSD 451 (997)
Q Consensus 372 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 451 (997)
|+.+.+..| ++.+....|.++..|+.+.+.++... +........+|+.+.+..+ ++......|.++.+|+.+.+..
T Consensus 187 L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 187 LKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQN 262 (394)
T ss_dssp CCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECC
T ss_pred ceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCC-ceecccccccccccceeEEcCC
Confidence 555555544 33334445555555555555544332 2233333455555555433 2223344555555666665555
Q ss_pred CcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccC
Q 001908 452 NKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSI 531 (997)
Q Consensus 452 N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 531 (997)
+... .....+.....+ +.+....+.+ ....|..+.+|+.+.+..+ ++..-..+|.+|.+|+.++|.++ ++..-
T Consensus 263 ~~~~-i~~~~F~~~~~l-~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~ 335 (394)
T 4fs7_A 263 NKLR-IGGSLFYNCSGL-KKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIG 335 (394)
T ss_dssp TTCE-ECSCTTTTCTTC-CEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEEC
T ss_pred Ccce-eecccccccccc-ceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEh
Confidence 5332 222333333333 4344433322 1234555566666666544 44334455666666666666533 44344
Q ss_pred ChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCC
Q 001908 532 PLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYN 573 (997)
Q Consensus 532 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N 573 (997)
..+|.++.+|+.+++..| ++..-..+|.++++|+.+++..|
T Consensus 336 ~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 336 KRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp TTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred HHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 556666666666666555 55444556666666666666543
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.47 E-value=8.8e-14 Score=138.65 Aligned_cols=108 Identities=21% Similarity=0.268 Sum_probs=86.7
Q ss_pred cccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccc
Q 001908 470 RFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCN 549 (997)
Q Consensus 470 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 549 (997)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45777777776 5666554 77888888888888777888888888888888888888766666788888888888888
Q ss_pred cccccCchhccCCCCCCEEeCCCCcCcccCC
Q 001908 550 NLSGQIPEFLENLSFLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 550 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p 580 (997)
+|++..+..|..+++|++|+|++|+|++.++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 8887666668888888888888888887655
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.45 E-value=1.2e-12 Score=148.96 Aligned_cols=314 Identities=14% Similarity=0.070 Sum_probs=212.5
Q ss_pred CCCccccccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcc
Q 001908 233 NLPLDIGVTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLD 312 (997)
Q Consensus 233 ~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 312 (997)
.|+...|.++.+|+.+.+.++ ++..-..+|.++++|+.++|.++ ++.+....|.++.+|+.+.+..+ +..++.
T Consensus 61 sIg~~AF~~c~~L~~i~lp~~-i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~---- 133 (394)
T 4fs7_A 61 SIGYAAFQGCRKVTEIKIPST-VREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGV---- 133 (394)
T ss_dssp EECTTTTTTCTTEEEEECCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECT----
T ss_pred EhHHHHhhCCCCceEEEeCCC-ccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecc----
Confidence 355555556667777777533 55444556777777777777544 55555556666666666555432 222222
Q ss_pred hhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCccc
Q 001908 313 FVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQ 392 (997)
Q Consensus 313 ~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 392 (997)
.+|.+. ..+.... .+.+......+|.++++|+.+.+..+- .......|.+
T Consensus 134 --------------------------~aF~~~-~~~~~~~--~~~~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~ 183 (394)
T 4fs7_A 134 --------------------------EAFKGC-DFKEITI--PEGVTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSG 183 (394)
T ss_dssp --------------------------TTTTTC-CCSEEEC--CTTCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTT
T ss_pred --------------------------eeeecc-ccccccc--CccccccchhhhcccCCCcEEecCCcc-ceeccccccC
Confidence 222221 1111111 112222445689999999999998664 4466778999
Q ss_pred ccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCccccccccccccccc
Q 001908 393 LRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFL 472 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L 472 (997)
+.+|+.+++..| ++......|.+...|+.+.+..+... +...+....+|+.+.+..+. +..-...+.....+ +.+
T Consensus 184 c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~--i~~~~~~~~~l~~i~ip~~~-~~i~~~~f~~~~~l-~~~ 258 (394)
T 4fs7_A 184 CGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYY--LGDFALSKTGVKNIIIPDSF-TELGKSVFYGCTDL-ESI 258 (394)
T ss_dssp CTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCE--ECTTTTTTCCCCEEEECTTC-CEECSSTTTTCSSC-CEE
T ss_pred CCCceEEEcCCC-ceEeCchhhccccccceeecCCCceE--eehhhcccCCCceEEECCCc-eecccccccccccc-eeE
Confidence 999999999887 55466778999999999998887654 44555667889999987653 32333455566666 778
Q ss_pred ccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcccccc
Q 001908 473 DLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 473 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
.+..+..+ .....|.....++.+....+.+ ....|.++.+|+.+.+.++ ++..-..+|.++.+|+.++|.++ ++
T Consensus 259 ~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~ 332 (394)
T 4fs7_A 259 SIQNNKLR-IGGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE 332 (394)
T ss_dssp EECCTTCE-ECSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC
T ss_pred EcCCCcce-eeccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc
Confidence 88877655 6677888999999988877654 3457889999999999866 66556778999999999999755 77
Q ss_pred ccCchhccCCCCCCEEeCCCCcCcccCCCC--CcCCCCcceeecCC
Q 001908 553 GQIPEFLENLSFLEYLNLSYNHFDGEVPTK--GVFSNKTRVQLTGN 596 (997)
Q Consensus 553 ~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~--~~~~~~~~~~~~~N 596 (997)
..-..+|.++++|+.+++..| ++ .|+.. ....+++.+.+..+
T Consensus 333 ~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 333 EIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp EECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEEGG
T ss_pred EEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEECCC
Confidence 566789999999999999877 55 33332 22345667766544
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.42 E-value=5.7e-13 Score=132.26 Aligned_cols=106 Identities=25% Similarity=0.278 Sum_probs=82.1
Q ss_pred ccccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecC
Q 001908 349 TDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSN 428 (997)
Q Consensus 349 ~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 428 (997)
+.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 34455555554 3454443 67888888888888888888888888888888888888777777888888888888888
Q ss_pred cCCCCCCCCCCCCCCCcEEecCCCcccCC
Q 001908 429 HLQGNIPPSLGNCKNLVSLNLSDNKLIGA 457 (997)
Q Consensus 429 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 457 (997)
+|++..+..|.++++|++|+|++|.+...
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 88877777788888888898888888743
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.40 E-value=6.7e-13 Score=132.24 Aligned_cols=103 Identities=27% Similarity=0.291 Sum_probs=79.2
Q ss_pred cccccCcccccccCCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhhhcCCCCCCeEEeecCc
Q 001908 350 DIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNH 429 (997)
Q Consensus 350 ~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 429 (997)
.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 16 ~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~ 92 (174)
T 2r9u_A 16 LVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92 (174)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCc
Confidence 3444455543 4455443 678888888888888778888888888888888888887666667888888888888888
Q ss_pred CCCCCCCCCCCCCCCcEEecCCCccc
Q 001908 430 LQGNIPPSLGNCKNLVSLNLSDNKLI 455 (997)
Q Consensus 430 l~~~~p~~~~~l~~L~~L~L~~N~l~ 455 (997)
|++..+..|..+++|++|+|++|.+.
T Consensus 93 l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 93 LKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred cceeCHHHhccccCCCEEEeCCCCcc
Confidence 88766666888888888888888887
No 400
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.31 E-value=1.4e-12 Score=145.79 Aligned_cols=131 Identities=21% Similarity=0.207 Sum_probs=100.9
Q ss_pred ccccCCC-cccCCCccccccccccceecccc-ccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCcc
Q 001908 471 FLDLGNN-HLNGSLPLEVGNLKNLVALYISG-NQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSC 548 (997)
Q Consensus 471 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 548 (997)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++.+|..|.+|++|+.|||++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 787 4777 88888999999996 999877778899999999999999999988888899999999999999
Q ss_pred ccccccCchhccCCCCCCEEeCCCCcCcccCCCCC--cCCCCcceeecCCCCcCCCCC
Q 001908 549 NNLSGQIPEFLENLSFLEYLNLSYNHFDGEVPTKG--VFSNKTRVQLTGNGKLCGGSN 604 (997)
Q Consensus 549 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~--~~~~~~~~~~~~N~~~C~~~~ 604 (997)
|+|++..+..|..++ |+.|+|++|+|.+.....+ .+.......+..+...|..++
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~~~~~~l~~~~~~C~~~~ 146 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEEEGLGGVPEQKLQCHGQG 146 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHHTTCSSCGGGCCCCSSSS
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHHhCcccccccCCCCCCCh
Confidence 999977667777666 9999999999987654221 011112233455667786544
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.26 E-value=6.5e-14 Score=157.37 Aligned_cols=86 Identities=17% Similarity=0.307 Sum_probs=41.0
Q ss_pred cccceecccccccccc----ccccccCCcCccEEEccCcccccc----CChhccccCcCCeeeCcccccccc----Cchh
Q 001908 491 KNLVALYISGNQFSGE----IPVTLTGCTGLEIFHMQGNSFRGS----IPLSLRSLKSIKELDLSCNNLSGQ----IPEF 558 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~ 558 (997)
++|+.|+|++|.|+.. ++..+..+++|++|+|++|+|+.. ++..+...++|+.|||++|+|+.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 3455555555555421 222334445555555555555432 233444455555555555555432 2233
Q ss_pred ccCCCCCCEEeCCCCcCc
Q 001908 559 LENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 559 ~~~l~~L~~L~ls~N~l~ 576 (997)
+...++|++|||++|+++
T Consensus 235 L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 235 AREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHCSSCCEEECTTSSCC
T ss_pred HHhCCCCCEEeccCCCCC
Confidence 334455555566555554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.24 E-value=1.3e-11 Score=137.97 Aligned_cols=108 Identities=19% Similarity=0.213 Sum_probs=96.5
Q ss_pred ceeccccc-cccccccccccCCcCccEEEccC-ccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCC
Q 001908 494 VALYISGN-QFSGEIPVTLTGCTGLEIFHMQG-NSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLS 571 (997)
Q Consensus 494 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls 571 (997)
..++++++ +|+ .+|. +..+++|+.|+|++ |+|++..|..|..+++|+.|+|++|+|++.+|..|.++++|++|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35789998 898 6888 99999999999996 99998888999999999999999999999999999999999999999
Q ss_pred CCcCcccCCCCCcCCCCcceeecCCCCcCCCC
Q 001908 572 YNHFDGEVPTKGVFSNKTRVQLTGNGKLCGGS 603 (997)
Q Consensus 572 ~N~l~~~~p~~~~~~~~~~~~~~~N~~~C~~~ 603 (997)
+|+|++.++.......+..+.+.+|++.|.|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 120 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCCGG
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCCCc
Confidence 99999877765333348999999999999763
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=2.9e-13 Score=152.05 Aligned_cols=168 Identities=18% Similarity=0.164 Sum_probs=114.6
Q ss_pred ccccceeccccccccccchhhhcCC-----CCCCeEEeecCcCCCCCCCCC-CCCCCCcEEecCCCcccCCccccccc--
Q 001908 393 LRNLQAIGLSSNFLQGNIPSSLGNL-----TLMTDLFLSSNHLQGNIPPSL-GNCKNLVSLNLSDNKLIGAVPQQILT-- 464 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~-- 464 (997)
+++|++|+|++|.|+......+... ++|+.|+|++|.|+......+ ..+++|++|+|++|.++......+..
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 4578888888888876544444332 688888888888864322222 23567888888888886444444332
Q ss_pred ---ccccccccccCCCcccCC----Cccccccccccceecccccccccc----ccccccCCcCccEEEccCcccccc---
Q 001908 465 ---ITTLSRFLDLGNNHLNGS----LPLEVGNLKNLVALYISGNQFSGE----IPVTLTGCTGLEIFHMQGNSFRGS--- 530 (997)
Q Consensus 465 ---l~~ll~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~--- 530 (997)
..++ +.|+|++|.|+.. ++..+...++|++|+|++|.|++. ++..+...++|+.|+|++|.|+..
T Consensus 151 ~~~~~~L-~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~ 229 (372)
T 3un9_A 151 LHDQCQI-TTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAAL 229 (372)
T ss_dssp HSTTCCC-CEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHH
T ss_pred HhcCCcc-ceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHH
Confidence 3445 8888888888642 344456678888888888888743 355667777888888888888753
Q ss_pred -CChhccccCcCCeeeCccccccccCchhccC
Q 001908 531 -IPLSLRSLKSIKELDLSCNNLSGQIPEFLEN 561 (997)
Q Consensus 531 -~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 561 (997)
++..+...++|++|||++|.|+..-...+..
T Consensus 230 ~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 230 ALARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 3344556688888888888887655555544
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.20 E-value=2.6e-10 Score=129.66 Aligned_cols=201 Identities=11% Similarity=0.107 Sum_probs=103.5
Q ss_pred CCCCCCCCCCCEEeccCCCCCCCCCCCcccccccceeccccccccccchhh--------------hcCCCCCCeEEeecC
Q 001908 363 PSGIGNLVNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNFLQGNIPSS--------------LGNLTLMTDLFLSSN 428 (997)
Q Consensus 363 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--------------~~~l~~L~~L~Ls~N 428 (997)
..+|.+ .+|+.+.+..+-. ......|.++.+|+......+.... +... +.....+..+.+. +
T Consensus 176 ~~aF~~-~~l~~i~ip~~~~-~i~~~af~~c~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~ 251 (394)
T 4gt6_A 176 ERAFTG-TALTQIHIPAKVT-RIGTNAFSECFALSTITSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-N 251 (394)
T ss_dssp TTTTTT-CCCSEEEECTTCC-EECTTTTTTCTTCCEEEECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-T
T ss_pred cccccc-cceeEEEECCccc-ccccchhhhccccceeccccccccc-ccceeecccccccccccccccccccceEEcC-C
Confidence 344443 4577776654433 2445566677777666655444331 1111 1112223333332 2
Q ss_pred cCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccccc
Q 001908 429 HLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIP 508 (997)
Q Consensus 429 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 508 (997)
.++..-..+|.++.+|+.+.+.++... .-...|.++..| +.+.+. +.++......|.++.+|+.++|..+ ++..-.
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L-~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~ 327 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPAL-QDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILD 327 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTC-CEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECT
T ss_pred cceEcccceeeecccccEEecccccce-ecCccccccccc-ccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehH
Confidence 233234456777777777777655432 333444555555 556664 3344344556667777777777654 443445
Q ss_pred ccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcC
Q 001908 509 VTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHF 575 (997)
Q Consensus 509 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l 575 (997)
.+|.+|.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... ..+....+|+.+.+..|.+
T Consensus 328 ~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 328 DAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC----------
T ss_pred hHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 56777777777777544 553445667777777777777665431 3455566666666655544
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.18 E-value=4.6e-10 Score=127.59 Aligned_cols=310 Identities=12% Similarity=0.155 Sum_probs=184.6
Q ss_pred ccceeeccCCCCCCCCCccccccCCCccEEEecCCc---CcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCe
Q 001908 219 SLENILLDVNGFTGNLPLDIGVTLPNLQVFAIGDNY---FSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWS 295 (997)
Q Consensus 219 ~L~~L~L~~N~l~g~lp~~~~~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 295 (997)
.|+.+.+-.+ ++ .|+...|.++++|+.+.+++|. ++..-..+|.++.+|+.+.+..+ ++.+....|..+.+|+.
T Consensus 65 ~L~sI~iP~s-vt-~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 65 VLTSVQIPDT-VT-EIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp CCCEEEECTT-CC-EECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred cCEEEEECCC-ee-EEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 3555555432 43 5555566666666666666553 44333455666666766666543 44455566666777777
Q ss_pred eEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEE
Q 001908 296 LDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLL 375 (997)
Q Consensus 296 L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L 375 (997)
+.+..+ +..++.. .+..+.+|+.+.+..+ ++..-..+|.. ..|+.+.+..+- ......+|.++.+|+..
T Consensus 142 i~lp~~-~~~I~~~------~F~~c~~L~~i~~~~~-~~~I~~~aF~~--~~l~~i~ip~~~-~~i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 142 VTIPEG-VTSVADG------MFSYCYSLHTVTLPDS-VTAIEERAFTG--TALTQIHIPAKV-TRIGTNAFSECFALSTI 210 (394)
T ss_dssp EECCTT-CCEECTT------TTTTCTTCCEEECCTT-CCEECTTTTTT--CCCSEEEECTTC-CEECTTTTTTCTTCCEE
T ss_pred ccccce-eeeeccc------ceecccccccccccce-eeEeccccccc--cceeEEEECCcc-cccccchhhhcccccee
Confidence 766532 3333222 3456667777766544 33233333332 345555555433 22556677778888877
Q ss_pred eccCCCCCCCCCCCcc--------------cccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCC
Q 001908 376 GIEFNQLTGNIPREIG--------------QLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNC 441 (997)
Q Consensus 376 ~L~~N~l~~~~p~~~~--------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 441 (997)
....+.... +...+. ....+..+.+. +.++..-..+|.++++|+.+.+.++..+ ....+|.++
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c 287 (394)
T 4gt6_A 211 TSDSESYPA-IDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNC 287 (394)
T ss_dssp EECCSSSCB-SSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTC
T ss_pred ccccccccc-ccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcccccc
Confidence 766655542 221111 11223333332 2334344567888889999988776554 666788889
Q ss_pred CCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEE
Q 001908 442 KNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFH 521 (997)
Q Consensus 442 ~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 521 (997)
++|+.+.+.. .++..-...|.++.+| +.+++..+ ++.....+|.++.+|+.+.+..+ ++..-..+|.+|++|+.++
T Consensus 288 ~~L~~i~l~~-~i~~I~~~aF~~c~~L-~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~ 363 (394)
T 4gt6_A 288 PALQDIEFSS-RITELPESVFAGCISL-KSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIE 363 (394)
T ss_dssp TTCCEEECCT-TCCEECTTTTTTCTTC-CEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEE
T ss_pred cccccccCCC-cccccCceeecCCCCc-CEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEE
Confidence 9999999864 4552333456667777 88888765 55456778999999999999765 6645567899999999999
Q ss_pred ccCccccccCChhccccCcCCeeeCcccccc
Q 001908 522 MQGNSFRGSIPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 522 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
+.+|.... ..+.....|+.+.+..|.+.
T Consensus 364 ~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 364 YSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp ESSCHHHH---HTCBCCCCC-----------
T ss_pred ECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 99987642 46777888999988877653
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.14 E-value=1.2e-10 Score=124.49 Aligned_cols=147 Identities=17% Similarity=0.142 Sum_probs=112.0
Q ss_pred HHHHhhcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCC
Q 001908 674 LSEATNEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKG 752 (997)
Q Consensus 674 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~ 752 (997)
+......|++....+.|+.+.||++.. .++.+++|+...........+.+|+++++.+. +..+.++++++. .
T Consensus 9 l~~~l~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~-----~ 81 (263)
T 3tm0_A 9 LKKLIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFER-----H 81 (263)
T ss_dssp HHHHHTTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEE-----E
T ss_pred HHHHhccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEe-----c
Confidence 334456788888899999999999976 46889999986432222346888999999884 677888888854 3
Q ss_pred CceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC-------------------------
Q 001908 753 ADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------------------------- 807 (997)
Q Consensus 753 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------------------------- 807 (997)
.+..++||||++|.++.+.+... .....++.++++++..||+..
T Consensus 82 ~~~~~lv~e~i~G~~l~~~~~~~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (263)
T 3tm0_A 82 DGWSNLLMSEADGVLCSEEYEDE-----------QSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDL 150 (263)
T ss_dssp TTEEEEEEECCSSEEHHHHCCTT-----------TCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTC
T ss_pred CCceEEEEEecCCeehhhccCCc-----------ccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccc
Confidence 45789999999999998763211 123467889999999999810
Q ss_pred -------------------------------CCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 808 -------------------------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 808 -------------------------------~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
.+.++|+|+++.||+++.+..+.|+||+.+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 151 ADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp SCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred cccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1359999999999999876667899999774
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.91 E-value=1.3e-09 Score=116.22 Aligned_cols=136 Identities=18% Similarity=0.112 Sum_probs=96.0
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC--cceEEeeeeccCcCCCceEE
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN--LIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~ 757 (997)
.+.+....+.|..+.||++... +|+.+++|+.... ....+.+|+++++.+.+.+ +.+++++.. ..+..+
T Consensus 21 ~~~~~~~~~gg~~~~v~~~~~~-~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~-----~~~~~~ 91 (264)
T 1nd4_A 21 GYDWAQQTIGCSDAAVFRLSAQ-GRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVT-----EAGRDW 91 (264)
T ss_dssp TCEEEECSCTTSSCEEEEEECT-TSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEE-----CSSCEE
T ss_pred CCceEecccCCCCceEEEEecC-CCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEecc-----CCCCCE
Confidence 3444333345666999999764 6778999997643 2245678999999886544 456777632 345689
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------------------------------ 807 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------------------------------ 807 (997)
+||||++|.++. ... .+ ...++.++++.+..||+..
T Consensus 92 ~v~e~i~G~~l~--~~~---------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (264)
T 1nd4_A 92 LLLGEVPGQDLL--SSH---------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDD 157 (264)
T ss_dssp EEEECCSSEETT--TSC---------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTS
T ss_pred EEEEecCCcccC--cCc---------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchh
Confidence 999999998884 211 11 2256777888888888642
Q ss_pred -------------------------CCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 808 -------------------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 808 -------------------------~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
.+.++|+|++|.||+++.++.++|+|||.|.
T Consensus 158 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 158 LDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp CCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1139999999999999887777899999874
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=1e-09 Score=122.03 Aligned_cols=159 Identities=18% Similarity=0.183 Sum_probs=77.4
Q ss_pred chhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccc--cccccccccccCC--CcccCC---
Q 001908 410 IPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQIL--TITTLSRFLDLGN--NHLNGS--- 482 (997)
Q Consensus 410 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~ll~~L~Ls~--N~l~~~--- 482 (997)
++..+..+++|+.|+|++|.-. .++. +. +++|+.|+|..|.+.......+. .+++| +.|+|+. |...+.
T Consensus 164 L~~ll~~~P~L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L-~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 164 LSPVLDAMPLLNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNL-EKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp CHHHHHTCTTCCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTC-CEEEEECBCGGGTCCSCG
T ss_pred HHHHHhcCCCCcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCC-cEEEEeccccccccchhH
Confidence 4556667778888888777311 2333 32 67778888777766433222222 34454 5555532 111111
Q ss_pred --Ccccc--ccccccceecccccccccccccccc---CCcCccEEEccCcccccc----CChhccccCcCCeeeCccccc
Q 001908 483 --LPLEV--GNLKNLVALYISGNQFSGEIPVTLT---GCTGLEIFHMQGNSFRGS----IPLSLRSLKSIKELDLSCNNL 551 (997)
Q Consensus 483 --~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l 551 (997)
+...+ ..+++|+.|+|++|.+.+..+..+. .+++|+.|+|+.|.+++. ++..+..+++|+.|+|++|.|
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 00111 1345666666666665543332222 345566666666665542 222334455566666666655
Q ss_pred cccCchhccC-CCCCCEEeCCCCc
Q 001908 552 SGQIPEFLEN-LSFLEYLNLSYNH 574 (997)
Q Consensus 552 ~~~~p~~~~~-l~~L~~L~ls~N~ 574 (997)
+...-..+.. + ...+++++|+
T Consensus 320 ~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHC--CSEEECCSBC
T ss_pred CHHHHHHHHHHc--CCEEEecCCc
Confidence 5332222322 1 2345555554
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.85 E-value=7.6e-08 Score=108.62 Aligned_cols=84 Identities=14% Similarity=0.136 Sum_probs=37.9
Q ss_pred ccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCccccccccCchhccCCCCC
Q 001908 486 EVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFL 565 (997)
Q Consensus 486 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 565 (997)
.|.++.+|+.+.+..+ ++......|.+|.+|+.+.+.++.++...+.+|.++.+|+.++|..+ ++..-..+|.++++|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 3444444444444332 32222334455555555555554444333444555555555555432 332333445555555
Q ss_pred CEEeCC
Q 001908 566 EYLNLS 571 (997)
Q Consensus 566 ~~L~ls 571 (997)
+.+.+.
T Consensus 336 ~~i~ip 341 (379)
T 4h09_A 336 STISYP 341 (379)
T ss_dssp CCCCCC
T ss_pred CEEEEC
Confidence 555443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.76 E-value=1.3e-07 Score=106.66 Aligned_cols=302 Identities=11% Similarity=0.054 Sum_probs=198.7
Q ss_pred ccCCCccEEEecCCcCcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccCccCCCCCCCCcchhhhhcc
Q 001908 240 VTLPNLQVFAIGDNYFSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGINNLGSGGANDLDFVTILTN 319 (997)
Q Consensus 240 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~ 319 (997)
..-.+|+.+.+.. .++..-..+|.++++|+.++|..+ ++.+...+|.+. +|+.+.+.. +++.++... +..
T Consensus 43 ~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~a------F~~ 112 (379)
T 4h09_A 43 KDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYV------FQG 112 (379)
T ss_dssp GGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTT------TTT
T ss_pred ccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccce------ecc
Confidence 3456788888864 466555678999999999999754 777778888887 688888764 466555442 233
Q ss_pred CCCCcEEEeecCccCCCCcccccccccccccccccCcccccccCCCCCCCCCCCEEeccCCCCCCC------------CC
Q 001908 320 CSKLKVLAFEENRLGGVLPHSIANLSTTMTDIYMGVNQISGTIPSGIGNLVNLNLLGIEFNQLTGN------------IP 387 (997)
Q Consensus 320 l~~L~~L~L~~N~l~~~~p~~~~~l~~~L~~L~l~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~------------~p 387 (997)
.+|+.+.+..+- .......|.+. .++.+.+.. .++......|.+..+++...+..+..... ..
T Consensus 113 -~~L~~i~lp~~~-~~i~~~~F~~~--~l~~~~~~~-~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (379)
T 4h09_A 113 -TDLDDFEFPGAT-TEIGNYIFYNS--SVKRIVIPK-SVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTIL 187 (379)
T ss_dssp -CCCSEEECCTTC-CEECTTTTTTC--CCCEEEECT-TCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEE
T ss_pred -CCcccccCCCcc-ccccccccccc--eeeeeeccc-eeeccccchhcccccccccccccccceeecccceeccccccee
Confidence 479999887653 32333333332 344444332 34445566788888888887776544311 11
Q ss_pred CCcccccccceeccccccccccchhhhcCCCCCCeEEeecCcCCCCCCCCCCCCCCCcEEecCCCcccCCcccccccccc
Q 001908 388 REIGQLRNLQAIGLSSNFLQGNIPSSLGNLTLMTDLFLSSNHLQGNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITT 467 (997)
Q Consensus 388 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 467 (997)
..+.....+..+.+..+.-. .....+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...+.....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~ 264 (379)
T 4h09_A 188 ESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTA 264 (379)
T ss_dssp EECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTT
T ss_pred ccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeeh
Confidence 22333344444444433222 44556777788888888665 44456677888888999988776 44233445555666
Q ss_pred cccccccCCCcccCCCccccccccccceeccccccccccccccccCCcCccEEEccCccccccCChhccccCcCCeeeCc
Q 001908 468 LSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLKSIKELDLS 547 (997)
Q Consensus 468 ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 547 (997)
+ +.+.+..+ ++......|.++++|+.+++.++.++..-..+|.+|.+|+.+.|..+ ++..-..+|.++.+|+.+.+.
T Consensus 265 l-~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip 341 (379)
T 4h09_A 265 L-KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYP 341 (379)
T ss_dssp C-CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred h-cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEEC
Confidence 6 77777654 44355567888889999999888887556678889999999999755 664556788888999988886
Q ss_pred cccccccCchhccCCC
Q 001908 548 CNNLSGQIPEFLENLS 563 (997)
Q Consensus 548 ~N~l~~~~p~~~~~l~ 563 (997)
.+ ++..-..+|.+.+
T Consensus 342 ~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 342 KS-ITLIESGAFEGSS 356 (379)
T ss_dssp TT-CCEECTTTTTTSS
T ss_pred Cc-cCEEchhHhhCCC
Confidence 55 5544455666543
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.74 E-value=2.3e-09 Score=119.27 Aligned_cols=160 Identities=14% Similarity=0.263 Sum_probs=108.7
Q ss_pred hcCCCCCCeEEeecCcCC---------CCCCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCCc
Q 001908 414 LGNLTLMTDLFLSSNHLQ---------GNIPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSLP 484 (997)
Q Consensus 414 ~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p 484 (997)
...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-. .++. + .+++| +.|+|..|.++....
T Consensus 135 ~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L-~~L~L~~~~l~~~~l 210 (362)
T 2ra8_A 135 KEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNL-KSLEIISGGLPDSVV 210 (362)
T ss_dssp HHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTC-SEEEEECSBCCHHHH
T ss_pred hhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCC-cEEEEecCCCChHHH
Confidence 444556666666544321 123345567899999999988411 3343 3 36777 899999988764433
Q ss_pred cccc--cccccceecccc--cccccc-----ccccc--cCCcCccEEEccCccccccCChhcc---ccCcCCeeeCcccc
Q 001908 485 LEVG--NLKNLVALYISG--NQFSGE-----IPVTL--TGCTGLEIFHMQGNSFRGSIPLSLR---SLKSIKELDLSCNN 550 (997)
Q Consensus 485 ~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~--~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~Ls~N~ 550 (997)
..+. .+++|+.|+|+. |...|. +...+ ..+++|+.|+|++|.+.+..+..+. .+++|++|||+.|.
T Consensus 211 ~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~ 290 (362)
T 2ra8_A 211 EDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGV 290 (362)
T ss_dssp HHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSC
T ss_pred HHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCC
Confidence 3444 689999999863 332221 11223 2478999999999999865554444 58899999999999
Q ss_pred cccc----CchhccCCCCCCEEeCCCCcCcc
Q 001908 551 LSGQ----IPEFLENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 551 l~~~----~p~~~~~l~~L~~L~ls~N~l~~ 577 (997)
|++. ++..+..+++|+.|+|++|.++.
T Consensus 291 L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 291 LTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 9864 34445677999999999998874
No 412
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.74 E-value=1.8e-08 Score=112.82 Aligned_cols=145 Identities=17% Similarity=0.207 Sum_probs=105.0
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEec--ccc-hhhHHHHHHHHHHHhhcC--CCCcceEEeeeeccCcCCCceEE
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILN--LMQ-KGALKSFVAECEVLRNTR--HRNLIKIITVCSSIDFKGADFKA 757 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~l~~~~~~~~~~~~~~~~ 757 (997)
..+.++.|.++.||+.... +..+++|+.. ... ......+.+|+++++.+. +..++++++++.... ..+..+
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~--~~g~~~ 117 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES--VIGRAF 117 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT--TTSSCE
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC--ccCCeE
Confidence 3567899999999999874 4678899875 322 112356788999999986 456888888865421 224578
Q ss_pred EEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------
Q 001908 758 LVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------------------------------ 807 (997)
Q Consensus 758 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------------------------------ 807 (997)
+||||++|..+.+.. ...++..++..++.+++++|..||+..
T Consensus 118 ~vme~v~G~~l~~~~--------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (359)
T 3dxp_A 118 YIMEFVSGRVLWDQS--------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLS 189 (359)
T ss_dssp EEEECCCCBCCCCTT--------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCeecCCCc--------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhc
Confidence 999999987764311 113567788889999999999999731
Q ss_pred -------------------------CCCcEecCCCCCCeeeCCCCc--EEEcccccchh
Q 001908 808 -------------------------QPPIVHGDLKPSNVLLDHDMV--AHVSDFGLARF 839 (997)
Q Consensus 808 -------------------------~~~ivHrDlk~~NIll~~~~~--~kl~DFg~a~~ 839 (997)
.+.++|+|+++.||+++.++. +.|+||+.+..
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 190 ETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp CCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred CCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999997753 68999998864
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.68 E-value=1.3e-08 Score=111.09 Aligned_cols=139 Identities=17% Similarity=0.229 Sum_probs=97.3
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCC--cceEEeeeeccCcCCCceEEEEE
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRN--LIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
.+.++.|....||+.. ..+++|+.... .....+.+|+++++.+. +.. +.+++.+... .......|+||
T Consensus 25 i~~~~~G~~n~v~~v~-----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~--~~~~~~~~~vm 95 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN-----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMP--SETYQMSFAGF 95 (304)
T ss_dssp CCEEEECSSEEEEEST-----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCC--CSSCSCSCEEE
T ss_pred eEecCCCCcceEEEEC-----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCC--CCCCCcceEEE
Confidence 4568999999999863 45889986532 33467889999998883 332 4445444211 11112357899
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhC----------------------------------
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH---------------------------------- 806 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~---------------------------------- 806 (997)
|+++|.++.+.... .++..++..++.++++.+..||+.
T Consensus 96 ~~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (304)
T 3sg8_A 96 TKIKGVPLTPLLLN--------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKG 167 (304)
T ss_dssp ECCCCEECCHHHHH--------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCH
T ss_pred cccCCeECCccccc--------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCc
Confidence 99999888654322 255667777888888888888851
Q ss_pred ---------------------CCCCcEecCCCCCCeeeCC--CCcEEEcccccchh
Q 001908 807 ---------------------CQPPIVHGDLKPSNVLLDH--DMVAHVSDFGLARF 839 (997)
Q Consensus 807 ---------------------~~~~ivHrDlk~~NIll~~--~~~~kl~DFg~a~~ 839 (997)
..+.++|+|++|.||+++. +..+.++||+.+..
T Consensus 168 ~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 168 PQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred ccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 1236899999999999998 56789999998864
No 414
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=4.8e-08 Score=102.90 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=28.1
Q ss_pred CcCccEEEccCccccc--cCChhccccCcCCeeeCccccccccCchhccCCC--CCCEEeCCCCcCcccCC
Q 001908 514 CTGLEIFHMQGNSFRG--SIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLS--FLEYLNLSYNHFDGEVP 580 (997)
Q Consensus 514 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~ls~N~l~~~~p 580 (997)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|++++.+|
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 3444444444444443 2233444444444444444444432 1222222 44555555555544433
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.39 E-value=7.1e-08 Score=101.58 Aligned_cols=96 Identities=23% Similarity=0.375 Sum_probs=75.5
Q ss_pred cccCCCccc---CCCccccccccccceeccccccccc--cccccccCCcCccEEEccCccccccCChhccccC--cCCee
Q 001908 472 LDLGNNHLN---GSLPLEVGNLKNLVALYISGNQFSG--EIPVTLTGCTGLEIFHMQGNSFRGSIPLSLRSLK--SIKEL 544 (997)
Q Consensus 472 L~Ls~N~l~---~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L 544 (997)
++++.|+.. +.++....++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..++ +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 778888543 2222233568899999999999997 5567788999999999999999965 3455555 99999
Q ss_pred eCccccccccCch-------hccCCCCCCEEe
Q 001908 545 DLSCNNLSGQIPE-------FLENLSFLEYLN 569 (997)
Q Consensus 545 ~Ls~N~l~~~~p~-------~~~~l~~L~~L~ 569 (997)
+|++|.+++.+|. .+..+++|+.||
T Consensus 226 ~L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 226 WLDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp ECTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred EccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999999987763 477889998886
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.29 E-value=3.1e-06 Score=92.81 Aligned_cols=136 Identities=18% Similarity=0.195 Sum_probs=98.8
Q ss_pred cCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC----CCcceEEeeeeccCcCCCce
Q 001908 680 EFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH----RNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 680 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~l~~~~~~~~~~~~~~ 755 (997)
.+...+.++.|..+.||+. ++.+++|+.... .....+.+|.++++.+.+ ..+.+++++ +.
T Consensus 38 ~i~~v~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~---------~~ 101 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ---------SD 101 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE---------CS
T ss_pred ceEEEEeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec---------CC
Confidence 5556778999999999998 556889987432 223568899999988865 224455543 24
Q ss_pred EEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCC---------------------------
Q 001908 756 KALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQ--------------------------- 808 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~--------------------------- 808 (997)
.++||||++|.++.+.... .++..++..++.++++.+..||+...
T Consensus 102 ~~lvme~i~G~~l~~~~~~--------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (320)
T 3r70_A 102 RFNIMKYIKGERITYEQYH--------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLIS 173 (320)
T ss_dssp SCEEEECCCCBCCCHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHH
T ss_pred cEEEEeecCCccccccccc--------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHH
Confidence 5899999999888643321 24555667777788888877774321
Q ss_pred ---------------------------------CCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 809 ---------------------------------PPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 809 ---------------------------------~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+.++|+|++|.||+++.++.+.|+||+.+..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 174 ILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999877789999998854
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.25 E-value=1.2e-07 Score=94.93 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=69.1
Q ss_pred CCCCCCCCcEEecCCC-cccCCcccccccccccccccccCCCcccCCCccccccccccceecccccccccc----ccccc
Q 001908 437 SLGNCKNLVSLNLSDN-KLIGAVPQQILTITTLSRFLDLGNNHLNGSLPLEVGNLKNLVALYISGNQFSGE----IPVTL 511 (997)
Q Consensus 437 ~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~ 511 (997)
.+...++|++|+|++| .+...-... +...+...++|++|+|++|++... +...+
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~---------------------l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L 89 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKA---------------------CAEALKTNTYVKKFSIVGTRSNDPVAFALAEML 89 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHH---------------------HHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHH---------------------HHHHHHhCCCcCEEECcCCCCChHHHHHHHHHH
Confidence 3455667777777777 664221111 112233345566666666666532 23344
Q ss_pred cCCcCccEEEccCcccccc----CChhccccCcCCeeeC--cccccccc----CchhccCCCCCCEEeCCCCcCc
Q 001908 512 TGCTGLEIFHMQGNSFRGS----IPLSLRSLKSIKELDL--SCNNLSGQ----IPEFLENLSFLEYLNLSYNHFD 576 (997)
Q Consensus 512 ~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~ 576 (997)
...+.|++|+|++|.|+.. +...+...+.|++|+| ++|.|... +...+...+.|++|+|++|.+.
T Consensus 90 ~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 90 KVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4456677777777777643 3445566667777777 66777643 2344555577777777777764
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.21 E-value=2.1e-07 Score=93.28 Aligned_cols=123 Identities=12% Similarity=0.122 Sum_probs=81.9
Q ss_pred cchhhhcCCCCCCeEEeecC-cCCCC----CCCCCCCCCCCcEEecCCCcccCCcccccccccccccccccCCCcccCCC
Q 001908 409 NIPSSLGNLTLMTDLFLSSN-HLQGN----IPPSLGNCKNLVSLNLSDNKLIGAVPQQILTITTLSRFLDLGNNHLNGSL 483 (997)
Q Consensus 409 ~~p~~~~~l~~L~~L~Ls~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ll~~L~Ls~N~l~~~~ 483 (997)
.+...+...++|++|+|++| .|... +...+...++|++|+|++|.+...-...+
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l--------------------- 85 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFAL--------------------- 85 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHH---------------------
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHH---------------------
Confidence 45567788999999999999 88732 34456677889999999998863221111
Q ss_pred ccccccccccceecccccccccc----ccccccCCcCccEEEc--cCcccccc----CChhccccCcCCeeeCcccccc
Q 001908 484 PLEVGNLKNLVALYISGNQFSGE----IPVTLTGCTGLEIFHM--QGNSFRGS----IPLSLRSLKSIKELDLSCNNLS 552 (997)
Q Consensus 484 p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L--s~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 552 (997)
...+...++|++|+|++|.|+.. +...+...+.|++|+| ++|.|+.. +...+...++|+.|+|++|.+.
T Consensus 86 ~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 86 AEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 12223335566777777776643 3455666677777777 67777643 2344555578888888888775
No 419
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.16 E-value=7.9e-06 Score=87.19 Aligned_cols=135 Identities=18% Similarity=0.109 Sum_probs=96.8
Q ss_pred cccccCcc-eEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCceEEEEEeec
Q 001908 686 MIGQGSFG-SVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADFKALVYEYM 763 (997)
Q Consensus 686 ~lg~G~~g-~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~~~lv~e~~ 763 (997)
.+..|..+ .||+......+..++||+-... ....+.+|...|+.+. +-.+.++++++.. .+..++|||++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~-----~~~~~lvme~l 102 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRT-----PDDAWLLTTAI 102 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-----TTEEEEEEECC
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEE-----CCeEEEEEEee
Confidence 44556655 6999888777788999986532 3456788999998884 4447778877543 35789999999
Q ss_pred cCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCC------------------------------------
Q 001908 764 QNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHC------------------------------------ 807 (997)
Q Consensus 764 ~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~------------------------------------ 807 (997)
+|.++.+...... .....++.+++..+..||..-
T Consensus 103 ~G~~~~~~~~~~~----------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (272)
T 4gkh_A 103 PGKTAFQVLEEYP----------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERN 172 (272)
T ss_dssp CSEEHHHHHHHCG----------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGT
T ss_pred CCccccccccCCH----------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhcccccc
Confidence 9988877654321 123345666666677776421
Q ss_pred -------------------CCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 808 -------------------QPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 808 -------------------~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
.+.++|+|+.+.||+++.++.+-|+||+.+.
T Consensus 173 ~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 173 GWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp TCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred chHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1148999999999999988777899999874
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.08 E-value=1.8e-05 Score=86.10 Aligned_cols=137 Identities=18% Similarity=0.180 Sum_probs=91.6
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCC---CcceEEeeeeccCcCCCceEEEEE
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHR---NLIKIITVCSSIDFKGADFKALVY 760 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~lv~ 760 (997)
.+.++.|....||+. ++.+++|+.. .......+.+|+++++.+.+. .+.+.+.++. ...+..++||
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~----~~~g~~~~v~ 92 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGK----RSDGNPFVGY 92 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEE----CTTSCEEEEE
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecc----cCCCceEEEE
Confidence 456788888899987 4568889853 233456788999999999642 3566666643 1234578999
Q ss_pred eeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhC----------------------------------
Q 001908 761 EYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHH---------------------------------- 806 (997)
Q Consensus 761 e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~---------------------------------- 806 (997)
||++|.++.+.... .++..+...++.++++.+..||+.
T Consensus 93 e~i~G~~l~~~~~~--------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l 164 (306)
T 3tdw_A 93 RKVQGQILGEDGMA--------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLL 164 (306)
T ss_dssp ECCCSEECHHHHHT--------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGS
T ss_pred eccCCeECchhhhh--------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhccccc
Confidence 99999888763211 123334444444444444444432
Q ss_pred -----------------------CCCCcEecCCCCCCeeeCC---CCc-EEEcccccchh
Q 001908 807 -----------------------CQPPIVHGDLKPSNVLLDH---DMV-AHVSDFGLARF 839 (997)
Q Consensus 807 -----------------------~~~~ivHrDlk~~NIll~~---~~~-~kl~DFg~a~~ 839 (997)
..+.++|+|+++.||+++. ++. +.|+||+.+..
T Consensus 165 ~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 165 DESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred chhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 2235799999999999987 455 58999998753
No 421
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.05 E-value=1.9e-05 Score=84.82 Aligned_cols=145 Identities=20% Similarity=0.125 Sum_probs=92.9
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCC---CcceEEeeeeccCcCCCceEEE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHR---NLIKIITVCSSIDFKGADFKAL 758 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~l~~~~~~~~~~~~~~~~l 758 (997)
...+.++.|.++.||+++.. +|+.++||+...........+.+|++.++.+.+. .+++++++. ..++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~-dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~---------~~~l 87 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------DRTL 87 (288)
T ss_dssp EEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------TTEE
T ss_pred cceeeeCCcchhheEEEEeC-CCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec---------CcEE
Confidence 34567999999999999875 7889999997543332345788999999999765 577887752 3589
Q ss_pred EEeeccCCCHH-----------HHhhcCCCC----CC--------c---CCCCHHHHH---HH-----------------
Q 001908 759 VYEYMQNGSLE-----------EWLHQSNGQ----PE--------V---CDLSLIQRL---NI----------------- 792 (997)
Q Consensus 759 v~e~~~~gsL~-----------~~l~~~~~~----~~--------~---~~~~~~~~~---~i----------------- 792 (997)
||||++++++. ..+|..... +. + -.-+|.... ++
T Consensus 88 vme~l~g~~~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~ 167 (288)
T 3d1u_A 88 AMEWVDERPPTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGD 167 (288)
T ss_dssp EEECCCCCCCCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHH
T ss_pred EEEecccCCCChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 99999988642 123332210 00 0 001333221 00
Q ss_pred HHHHHHHHHHHh----hCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 793 AIDMASAIEYLH----HHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 793 ~~~i~~~L~yLH----~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
...+-+.++.+. ....+.++|+|+.+.||+++. +.+.++|| .+.
T Consensus 168 ~~~~~~l~~~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 168 VRLVEKVLDALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp HHHHHHHHHTHHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHHHHHHHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 111122223332 223568999999999999988 45889999 553
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.90 E-value=3.3e-05 Score=85.93 Aligned_cols=147 Identities=14% Similarity=0.165 Sum_probs=89.4
Q ss_pred ccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC--cceEEeeeeccCcCCCceEEEE
Q 001908 682 SSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN--LIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 682 ~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~l~~~~~~~~~~~~~~~~lv 759 (997)
...+.++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++.. ..+..++|
T Consensus 44 ~~i~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~----~~g~~~lv 112 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF----SESLTYCI 112 (362)
T ss_dssp EEEEEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES----SSSCEEEE
T ss_pred ceEEECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC----CCCCeEEE
Confidence 3456788999999999886 5788999987532 25788999999886433 5566665432 12568999
Q ss_pred EeeccCCCHHH------------------HhhcCCCCC----------Cc-CCCCHHHH---------------------
Q 001908 760 YEYMQNGSLEE------------------WLHQSNGQP----------EV-CDLSLIQR--------------------- 789 (997)
Q Consensus 760 ~e~~~~gsL~~------------------~l~~~~~~~----------~~-~~~~~~~~--------------------- 789 (997)
|||++|.++.+ .++...... .. ..-.|...
T Consensus 113 ~e~l~G~~l~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~ 192 (362)
T 3ovc_A 113 SRRAQGVTLQDLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVS 192 (362)
T ss_dssp EECCCSEETTTSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTH
T ss_pred EEecCCCCcccCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 99998765531 112211000 00 00011111
Q ss_pred HHHHHHHHHHHHHHhhCC-CCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 790 LNIAIDMASAIEYLHHHC-QPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 790 ~~i~~~i~~~L~yLH~~~-~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
......+...++++.... .+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 193 ~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 193 ASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred ccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 011111222223332210 14689999999999998887889999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.75 E-value=3.4e-05 Score=85.87 Aligned_cols=84 Identities=7% Similarity=-0.027 Sum_probs=54.7
Q ss_pred CCcc-cccCcceEEEEEEC--C----CCcEEEEEEecccc---hhhHHHHHHHHHHHhhcC-C--CCcceEEeeeeccCc
Q 001908 684 SNMI-GQGSFGSVYKGILG--E----NGTFVAVKILNLMQ---KGALKSFVAECEVLRNTR-H--RNLIKIITVCSSIDF 750 (997)
Q Consensus 684 ~~~l-g~G~~g~V~~~~~~--~----~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~l~~~~~~~~~ 750 (997)
.+.| +.|....+|+.... . +++.+++|+..... ......+.+|+.+++.+. + -.+.++++++....
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~- 103 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGD- 103 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSST-
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCC-
Confidence 3567 88888999988753 0 16678999875432 101245678888888874 3 35777887754321
Q ss_pred CCCceEEEEEeeccCCCHH
Q 001908 751 KGADFKALVYEYMQNGSLE 769 (997)
Q Consensus 751 ~~~~~~~lv~e~~~~gsL~ 769 (997)
..+..++||||++|.++.
T Consensus 104 -~~g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 104 -VLGTPFFLMDYVEGVVPP 121 (357)
T ss_dssp -TTSSCEEEEECCCCBCCC
T ss_pred -ccCCceEEEEecCCCChh
Confidence 113568999999886654
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.67 E-value=4.5e-05 Score=86.30 Aligned_cols=76 Identities=14% Similarity=0.110 Sum_probs=49.1
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccch-------hhHHHHHHHHHHHhhcCC--C-CcceEEeeeeccCcCCC
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQK-------GALKSFVAECEVLRNTRH--R-NLIKIITVCSSIDFKGA 753 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~-niv~l~~~~~~~~~~~~ 753 (997)
.+.+|.|..+.||+++...+++.|+||....... ...+.+..|.++++.+.. + .+.+++.+. .
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d-------~ 107 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD-------T 107 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE-------T
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc-------C
Confidence 4678999999999997755678899998653211 123456789999888742 3 344566542 2
Q ss_pred ceEEEEEeeccCC
Q 001908 754 DFKALVYEYMQNG 766 (997)
Q Consensus 754 ~~~~lv~e~~~~g 766 (997)
+..++||||+++.
T Consensus 108 ~~~~lvmE~l~g~ 120 (397)
T 2olc_A 108 EMAVTVMEDLSHL 120 (397)
T ss_dssp TTTEEEECCCTTS
T ss_pred CccEEEEEeCCCc
Confidence 2458999999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.49 E-value=4e-05 Score=74.67 Aligned_cols=84 Identities=18% Similarity=0.103 Sum_probs=59.3
Q ss_pred cccceeccccccccccccccccCCcCccEEEccCcc-ccccCChhcccc----CcCCeeeCccc-cccccCchhccCCCC
Q 001908 491 KNLVALYISGNQFSGEIPVTLTGCTGLEIFHMQGNS-FRGSIPLSLRSL----KSIKELDLSCN-NLSGQIPEFLENLSF 564 (997)
Q Consensus 491 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N-~l~~~~p~~~~~l~~ 564 (997)
.+|+.||+|++.++..--..+.++++|+.|+|++|. ++..--..++.+ ++|+.|+|+++ +|+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467888888888776555667788888888888884 664433445553 36888888887 476544456777888
Q ss_pred CCEEeCCCCc
Q 001908 565 LEYLNLSYNH 574 (997)
Q Consensus 565 L~~L~ls~N~ 574 (997)
|++|+|++++
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888765
No 426
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.42 E-value=0.00083 Score=73.96 Aligned_cols=148 Identities=18% Similarity=0.146 Sum_probs=80.0
Q ss_pred CcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC--CCcceEEeeeeccC-cCCCceEEEEEe
Q 001908 685 NMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH--RNLIKIITVCSSID-FKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~-~~~~~~~~lv~e 761 (997)
+.|+.|..+.||+.... +..+++|+.... . ..+..|+++++.+.. -.+.+++....... ....+..++|||
T Consensus 38 ~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTD--SGAVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEET--TEEEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeC--CCCEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 34566778999999874 345999998752 1 233445666655531 13344443110000 012456789999
Q ss_pred eccCCCHH--------------HHhhcCC-CC--CCc-----CCCCHHHH------------------------------
Q 001908 762 YMQNGSLE--------------EWLHQSN-GQ--PEV-----CDLSLIQR------------------------------ 789 (997)
Q Consensus 762 ~~~~gsL~--------------~~l~~~~-~~--~~~-----~~~~~~~~------------------------------ 789 (997)
|++|.++. ..++... .. +.. ..-.|...
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99886532 1122211 00 100 01123211
Q ss_pred -HHHHHHHHHHHHHHhh----------CCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 790 -LNIAIDMASAIEYLHH----------HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 790 -~~i~~~i~~~L~yLH~----------~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
..+..++..++++|++ ...+.++|+|+++.||+++.++.+.|+||+.+.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111224445667763 013489999999999999888899999999774
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.18 E-value=6.8e-05 Score=73.05 Aligned_cols=84 Identities=17% Similarity=0.114 Sum_probs=52.9
Q ss_pred CCCCEEeccCCCCCCCCCCCcccccccceecccccc-ccccchhhhcCC----CCCCeEEeecCc-CCCCCCCCCCCCCC
Q 001908 370 VNLNLLGIEFNQLTGNIPREIGQLRNLQAIGLSSNF-LQGNIPSSLGNL----TLMTDLFLSSNH-LQGNIPPSLGNCKN 443 (997)
Q Consensus 370 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 443 (997)
.+|+.||++++.|+..--..+.++++|++|+|+++. |+..--..+..+ ++|++|+|+++. |+..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 457777777777665444556667777777777764 654444445554 357777777764 65433344566777
Q ss_pred CcEEecCCCc
Q 001908 444 LVSLNLSDNK 453 (997)
Q Consensus 444 L~~L~L~~N~ 453 (997)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 428
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.04 E-value=0.0018 Score=69.40 Aligned_cols=79 Identities=19% Similarity=0.104 Sum_probs=57.1
Q ss_pred hcCccCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC---CCcceEEeeeeccCcCCCce
Q 001908 679 NEFSSSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH---RNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 679 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h---~niv~l~~~~~~~~~~~~~~ 755 (997)
.+....+.+|.|..+.||+.+.. +|+.|+||+...........+.+|++.|+.+.. -.+.+++++. .
T Consensus 15 ~~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~---------~ 84 (288)
T 3f7w_A 15 REVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD---------D 84 (288)
T ss_dssp CCEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE---------T
T ss_pred CCeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc---------C
Confidence 34556778999999999999986 788999998764433333467889999988842 2355666542 2
Q ss_pred EEEEEeeccCCC
Q 001908 756 KALVYEYMQNGS 767 (997)
Q Consensus 756 ~~lv~e~~~~gs 767 (997)
.++||||++++.
T Consensus 85 ~~lv~e~l~~~~ 96 (288)
T 3f7w_A 85 RTLAMEWVDERP 96 (288)
T ss_dssp TEEEEECCCCCC
T ss_pred ceEEEEeecccC
Confidence 378999998764
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.00079 Score=62.45 Aligned_cols=58 Identities=24% Similarity=0.339 Sum_probs=37.4
Q ss_pred cEEEccCcccc-ccCChhccccCcCCeeeCccccccccCchhccCCCCCCEEeCCCCcCcc
Q 001908 518 EIFHMQGNSFR-GSIPLSLRSLKSIKELDLSCNNLSGQIPEFLENLSFLEYLNLSYNHFDG 577 (997)
Q Consensus 518 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~ 577 (997)
..++.+++.++ ..+|..+. ++|+.|||++|+|+...+..|..+++|+.|+|++|+|..
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeec
Confidence 36777777776 34554433 357777788887776666667777777766666555543
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.92 E-value=0.0013 Score=74.72 Aligned_cols=30 Identities=27% Similarity=0.560 Sum_probs=26.8
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 809 PPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 809 ~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+.++|+|+++.||+++.++ ++++||+.+..
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 3899999999999998776 99999998864
No 431
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.91 E-value=0.0041 Score=67.09 Aligned_cols=142 Identities=20% Similarity=0.169 Sum_probs=91.1
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcC---CCCcceEEeeeeccCcCCCceEEEE
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTR---HRNLIKIITVCSSIDFKGADFKALV 759 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~l~~~~~~~~~~~~~~~~lv 759 (997)
..+.|+.|....+|+... ++..++||+.... ....+.+|.+.|+.+. ...++++++++.. .+..++|
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~-----~g~~~lv 109 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNS-----QGHSFLL 109 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEEC-----SSEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeec-----CCceEEE
Confidence 346789999999999876 5678899987533 2466788999998884 3568888877532 3578999
Q ss_pred EeeccCCCHH-----------HHhhcCCCCCC----------------cCCCCHHHHH---HHHH---------------
Q 001908 760 YEYMQNGSLE-----------EWLHQSNGQPE----------------VCDLSLIQRL---NIAI--------------- 794 (997)
Q Consensus 760 ~e~~~~gsL~-----------~~l~~~~~~~~----------------~~~~~~~~~~---~i~~--------------- 794 (997)
|||+++..+. -.++.....+. .-.-+|.... ++..
T Consensus 110 me~l~G~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~ 189 (312)
T 3jr1_A 110 LEALNKSKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNI 189 (312)
T ss_dssp EECCCCCCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCH
T ss_pred EEeccCCCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 9999987541 13343321000 0012454321 1111
Q ss_pred -HHHHH-HHHHhh-CCCCCcEecCCCCCCeeeCCCCcEEEcccc
Q 001908 795 -DMASA-IEYLHH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFG 835 (997)
Q Consensus 795 -~i~~~-L~yLH~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFg 835 (997)
+++.. ...|.. ...|.++|+|+.+.|++++.++ +.|.||+
T Consensus 190 ~~l~~~l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 190 DLIVQIVADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHHHHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHHHHHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 11111 223432 2356899999999999999887 8899974
No 432
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.85 E-value=0.0013 Score=60.88 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=32.6
Q ss_pred eeeCcccccc-ccCchhccCCCCCCEEeCCCCcCcccCCCC-CcCCCCcceeecCCCCcCCC
Q 001908 543 ELDLSCNNLS-GQIPEFLENLSFLEYLNLSYNHFDGEVPTK-GVFSNKTRVQLTGNGKLCGG 602 (997)
Q Consensus 543 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~N~~~C~~ 602 (997)
.+|.+++.|+ ..+|..+. ++|++|+|++|+|+...+.. ..+..++.+.+.+|||.|++
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC 71 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDC 71 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSG
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccC
Confidence 5666666664 24454332 34666666666666544432 33455666666666666655
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.64 E-value=0.011 Score=64.23 Aligned_cols=167 Identities=14% Similarity=0.108 Sum_probs=89.0
Q ss_pred ccChHHHHHHhhcCcc-----CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC--cce
Q 001908 668 MVSYSELSEATNEFSS-----SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN--LIK 740 (997)
Q Consensus 668 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 740 (997)
..+..++......|.. .+.|+.|....+|+.... ++ .+++|+..... ....+..|+++++.+.... +.+
T Consensus 6 ~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~ 81 (322)
T 2ppq_A 6 DITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPL 81 (322)
T ss_dssp CCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEES-SC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCC
T ss_pred cCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCc
Confidence 3455566666666654 235667888899999874 33 68899886521 1234556888877774222 333
Q ss_pred EEeeeeccC-cCCCceEEEEEeeccCCCHH--------------HHhhcCC-CCCCc--CCC---CHHHHHH--------
Q 001908 741 IITVCSSID-FKGADFKALVYEYMQNGSLE--------------EWLHQSN-GQPEV--CDL---SLIQRLN-------- 791 (997)
Q Consensus 741 l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~--------------~~l~~~~-~~~~~--~~~---~~~~~~~-------- 791 (997)
++....... ....+..+++++|++|..+. -.++... ..... ... .|.....
T Consensus 82 ~~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 161 (322)
T 2ppq_A 82 PLPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADE 161 (322)
T ss_dssp BCCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGG
T ss_pred ccCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHh
Confidence 332210000 00124578999999876431 1122211 10000 001 1222100
Q ss_pred ----HHHHHHHHHHHHhhC----CCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 792 ----IAIDMASAIEYLHHH----CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 792 ----i~~~i~~~L~yLH~~----~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
+...+...++++++. ..++++|+|+.+.||+++.++.+.++||+.+.
T Consensus 162 ~~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 162 VEKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp TSTTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred hhhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 011244455666532 12379999999999999887667899999774
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.63 E-value=0.0037 Score=67.35 Aligned_cols=141 Identities=14% Similarity=0.099 Sum_probs=76.2
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCc-ceEEeeeeccCcCCCceEEEEEe
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL-IKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e 761 (997)
-.+.|+.|....+|+. +.+++|+....... .....+|+.+++.+....+ .++++++ .+..++++|
T Consensus 22 ~i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~-------~~~~~~v~e 87 (301)
T 3dxq_A 22 GPLERLGGLTNLVFRA------GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVD-------PATGVMVTR 87 (301)
T ss_dssp SCEEEESCSSEEEEEE------TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC-------TTTCCEEEE
T ss_pred ceeEcCCcccccccee------eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEE-------CCCCEEEEe
Confidence 3678899999999998 45889987643221 1223568888877742222 4566542 223478999
Q ss_pred ec-cCCCHHH------------------HhhcCCCCCCcCCCCHHH-HHHHHH--------------HHHHHH----HHH
Q 001908 762 YM-QNGSLEE------------------WLHQSNGQPEVCDLSLIQ-RLNIAI--------------DMASAI----EYL 803 (997)
Q Consensus 762 ~~-~~gsL~~------------------~l~~~~~~~~~~~~~~~~-~~~i~~--------------~i~~~L----~yL 803 (997)
|+ ++.++.. .+|....... ...+... ...+.. .+.+.+ +.+
T Consensus 88 ~i~~g~~l~~~~~~~~~~~~~~~~~~La~lH~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 166 (301)
T 3dxq_A 88 YIAGAQTMSPEKFKTRPGSPARAGEAFRKLHGSGAVFP-FRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSAL 166 (301)
T ss_dssp CCTTCEECCHHHHHHSTTHHHHHHHHHHHHHTSCCCCS-SBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHH
T ss_pred ecCCCccCCHhhHhhhHHHHHHHHHHHHHHhCCCCCCC-CCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHH
Confidence 99 6544421 1122111000 0011111 111110 011111 112
Q ss_pred hh-CCCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 804 HH-HCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 804 H~-~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
.. ...+.++|+|+.+.||+ ..++.+.++||..|..
T Consensus 167 ~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 167 AAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp HSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HhcCCCceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 11 12236899999999999 5677889999998753
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.55 E-value=0.00025 Score=70.41 Aligned_cols=42 Identities=21% Similarity=0.369 Sum_probs=18.8
Q ss_pred CccCeeEccCccCCCCCCCCcchhhhhccCCCCcEEEeecCccC
Q 001908 291 KNLWSLDLGINNLGSGGANDLDFVTILTNCSKLKVLAFEENRLG 334 (997)
Q Consensus 291 ~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~ 334 (997)
+.|+.|+|++|.|...++. .+.+.+..-+.|++|+|++|+|.
T Consensus 70 ~~L~~L~L~~n~igd~ga~--alA~aL~~N~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 70 KHIEKFSLANTAISDSEAR--GLIELIETSPSLRVLNVESNFLT 111 (197)
T ss_dssp SCCCEEECTTSCCBHHHHT--THHHHHHHCSSCCEEECCSSBCC
T ss_pred CCcCEEEccCCCCChHHHH--HHHHHHhcCCccCeEecCCCcCC
Confidence 3444444444444432222 22334444455555555555554
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.52 E-value=0.00022 Score=70.85 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=33.5
Q ss_pred ccccceecccccccccc----chhhhcCCCCCCeEEeecCcC---CC----CCCCCCCCCCCCcEEecCCCcc
Q 001908 393 LRNLQAIGLSSNFLQGN----IPSSLGNLTLMTDLFLSSNHL---QG----NIPPSLGNCKNLVSLNLSDNKL 454 (997)
Q Consensus 393 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l---~~----~~p~~~~~l~~L~~L~L~~N~l 454 (997)
-+.|++|+|++|+|... +-+.+..-+.|+.|+|++|.. .. .+...+..-+.|+.|+++.|.+
T Consensus 97 N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 97 SPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp CSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred CCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 34556666666665532 233444555677777765432 21 1223344556777777777654
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.40 E-value=0.026 Score=61.46 Aligned_cols=166 Identities=14% Similarity=0.100 Sum_probs=88.2
Q ss_pred ccChHHHHHHhhcCcc-----CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC--cce
Q 001908 668 MVSYSELSEATNEFSS-----SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN--LIK 740 (997)
Q Consensus 668 ~~~~~~~~~~~~~~~~-----~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~ 740 (997)
..+...+....+.|.. ...++ |....||+.... +|+.+++|+..... .....+..|.++++.+.... +++
T Consensus 10 ~l~~~~i~~~l~~~g~~~~~~~~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~ 86 (328)
T 1zyl_A 10 TLHPDTIMDALFEHGIRVDSGLTPLN-SYENRVYQFQDE-DRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAA 86 (328)
T ss_dssp CCCHHHHHHHHHHTTCCCCSCCEEEC-CSSSEEEEECCT-TCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCC
T ss_pred CCCHHHHHHHHHHcCCCCCceEEeec-CcccceEEEEcC-CCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecc
Confidence 3444555555555533 23466 788899988764 56679999986321 12345667888888774222 344
Q ss_pred EEeeeeccC-cCCCceEEEEEeeccCCCHH-----H---------HhhcCC---CCCCcCCCCHHHH----HH-------
Q 001908 741 IITVCSSID-FKGADFKALVYEYMQNGSLE-----E---------WLHQSN---GQPEVCDLSLIQR----LN------- 791 (997)
Q Consensus 741 l~~~~~~~~-~~~~~~~~lv~e~~~~gsL~-----~---------~l~~~~---~~~~~~~~~~~~~----~~------- 791 (997)
++.. .... ....+..++||||++|.++. . .++... ........++... ..
T Consensus 87 ~~~~-~g~~~~~~~g~~~~l~~~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 165 (328)
T 1zyl_A 87 PVAF-NGQTLLNHQGFYFAVFPSVGGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATL 165 (328)
T ss_dssp CCCB-TTBSCEEETTEEEEEEECCCCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSS
T ss_pred eeec-CCcEEEEECCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCc
Confidence 4432 1100 01134668899999875421 1 122110 0000111222111 00
Q ss_pred --------HHHHHHHHHHHHhhC----CCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 792 --------IAIDMASAIEYLHHH----CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 792 --------i~~~i~~~L~yLH~~----~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
+...+...++.+.+. ..+.++|+|+++.||+++ + .+.++||+.+..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 166 IPSGLKAAFLKATDELIAAVTAHWREDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCTTTHHHHHHHHHHHHHHHHHHCCSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 011111223333221 233689999999999998 4 899999987753
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.39 E-value=0.0083 Score=66.57 Aligned_cols=144 Identities=13% Similarity=0.144 Sum_probs=83.1
Q ss_pred CCcccccCcceEEEEEECC-------CCcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCce
Q 001908 684 SNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+.+..|....+|++.... +++.|++|+..... .....+.+|.++++.+. +.-..++++++ .+
T Consensus 55 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~-----~~--- 125 (379)
T 3feg_A 55 VYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVF-----PE--- 125 (379)
T ss_dssp CEEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEE-----TT---
T ss_pred EEEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEc-----CC---
Confidence 3567778889999998742 35789999864321 22355678999998874 33345666653 11
Q ss_pred EEEEEeeccCCCHHH-----------------HhhcCCCCCCcCCCC--HHHHHHHHHHHHH------------------
Q 001908 756 KALVYEYMQNGSLEE-----------------WLHQSNGQPEVCDLS--LIQRLNIAIDMAS------------------ 798 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~-----------------~l~~~~~~~~~~~~~--~~~~~~i~~~i~~------------------ 798 (997)
.+||||++|.++.. .++.... +-..... +.++.++..++..
T Consensus 126 -g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~-~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~ 203 (379)
T 3feg_A 126 -GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEM-PFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLK 203 (379)
T ss_dssp -EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCC-SSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHH
T ss_pred -ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCC-CCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHH
Confidence 28999998765421 1222111 0011122 3444445444322
Q ss_pred -HHHHHh----hC-CCCCcEecCCCCCCeeeCCC----CcEEEcccccch
Q 001908 799 -AIEYLH----HH-CQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLAR 838 (997)
Q Consensus 799 -~L~yLH----~~-~~~~ivHrDlk~~NIll~~~----~~~kl~DFg~a~ 838 (997)
.+++|. .. ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 204 ~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 204 DEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 233332 21 12379999999999999876 789999999875
No 439
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.32 E-value=0.008 Score=68.59 Aligned_cols=75 Identities=13% Similarity=0.054 Sum_probs=47.6
Q ss_pred CCcccccCcceEEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCCc-ceEEeeeeccCcCCCceEEEEEee
Q 001908 684 SNMIGQGSFGSVYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRNL-IKIITVCSSIDFKGADFKALVYEY 762 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~l~~~~~~~~~~~~~~~~lv~e~ 762 (997)
.+.|+.|-...+|++.....++.+++|+........ ....+|..+++.+...++ .++++++ . . .+||||
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~-----~-~---G~v~e~ 182 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF-----T-N---GRIEEF 182 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE-----T-T---EEEEEC
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe-----C-C---eEEEEe
Confidence 457888888999999885435789999875322211 122578899988864444 5666653 1 1 259999
Q ss_pred ccCCCH
Q 001908 763 MQNGSL 768 (997)
Q Consensus 763 ~~~gsL 768 (997)
++|.++
T Consensus 183 I~G~~l 188 (458)
T 2qg7_A 183 MDGYAL 188 (458)
T ss_dssp CCSEEC
T ss_pred eCCccC
Confidence 987543
No 440
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.21 E-value=0.024 Score=61.85 Aligned_cols=144 Identities=13% Similarity=0.069 Sum_probs=73.2
Q ss_pred CcccccCcce-EEEEEECCCCcEEEEEEecccchhhHHHHHHHHHHHhhcCC--CCcceEEeeeeccCcCCCceEEEEEe
Q 001908 685 NMIGQGSFGS-VYKGILGENGTFVAVKILNLMQKGALKSFVAECEVLRNTRH--RNLIKIITVCSSIDFKGADFKALVYE 761 (997)
Q Consensus 685 ~~lg~G~~g~-V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~l~~~~~~~~~~~~~~~~lv~e 761 (997)
+.++.|+... +|+.... +++.+++|....... ..+..|+++++.+.. -.+.+++.+.. .. .+++||
T Consensus 24 ~~l~gg~s~~~~~r~~~~-~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~-----~~--g~ll~e 92 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSP-TGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEH-----AR--GLLLIE 92 (333)
T ss_dssp CC--------CCEEEECT-TCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEET-----TT--TEEEEC
T ss_pred eECCCCCCCceEEEEEcC-CCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecC-----CC--CEEEEe
Confidence 4566665554 6677542 366777886543221 223456777776632 23556666521 12 268999
Q ss_pred eccCCCHHHHhhcCCC--------------------CCCcCCCCHHHHH-------H-------------HHHHHHHHHH
Q 001908 762 YMQNGSLEEWLHQSNG--------------------QPEVCDLSLIQRL-------N-------------IAIDMASAIE 801 (997)
Q Consensus 762 ~~~~gsL~~~l~~~~~--------------------~~~~~~~~~~~~~-------~-------------i~~~i~~~L~ 801 (997)
++.+.++.+++..... ......++..... . ....+...++
T Consensus 93 ~l~~~~l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~ 172 (333)
T 3csv_A 93 DLGDALFTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFA 172 (333)
T ss_dssp CCCSCBHHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHH
T ss_pred eCCCcchHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 9977777655432110 0000112211100 0 0011222233
Q ss_pred HHhh---CCCCCcEecCCCCCCeeeCCC----CcEEEcccccchh
Q 001908 802 YLHH---HCQPPIVHGDLKPSNVLLDHD----MVAHVSDFGLARF 839 (997)
Q Consensus 802 yLH~---~~~~~ivHrDlk~~NIll~~~----~~~kl~DFg~a~~ 839 (997)
.+.+ ...+.++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 173 ~l~~~~~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 173 QILSAQLEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp HHHHHHCCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred HHHHhcccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3311 123479999999999999875 7899999998854
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.78 E-value=0.038 Score=62.57 Aligned_cols=73 Identities=18% Similarity=0.185 Sum_probs=48.6
Q ss_pred CCcccccCcceEEEEEECC-------CCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC-cceEEeeeeccCcCCCce
Q 001908 684 SNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN-LIKIITVCSSIDFKGADF 755 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~~ 755 (997)
.+.|+.|....||++.... .++.+++|+..... ....+.+|..+++.+...+ ..++++.+ .+
T Consensus 78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~-----~~--- 147 (429)
T 1nw1_A 78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIF-----SG--- 147 (429)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEE-----TT---
T ss_pred EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEe-----CC---
Confidence 4567888889999998752 25789999984311 1144557999988885333 35666652 11
Q ss_pred EEEEEeeccCCC
Q 001908 756 KALVYEYMQNGS 767 (997)
Q Consensus 756 ~~lv~e~~~~gs 767 (997)
.+|+||++|.+
T Consensus 148 -g~v~e~l~G~~ 158 (429)
T 1nw1_A 148 -GRLEEYIPSRP 158 (429)
T ss_dssp -EEEECCCCEEE
T ss_pred -CEEEEEeCCcc
Confidence 38999998643
No 442
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.68 E-value=0.014 Score=64.75 Aligned_cols=74 Identities=16% Similarity=0.163 Sum_probs=44.3
Q ss_pred CCcccccCcceEEEEEECC--------CCcEEEEEEecccchhhHHHHHHHHHHHhhcCCCC-cceEEeeeeccCcCCCc
Q 001908 684 SNMIGQGSFGSVYKGILGE--------NGTFVAVKILNLMQKGALKSFVAECEVLRNTRHRN-LIKIITVCSSIDFKGAD 754 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~l~~~~~~~~~~~~~ 754 (997)
.+.++.|....+|+..... .++.+++|+....... ......|.++++.+...+ +.++++.. .
T Consensus 38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~-----~--- 108 (369)
T 3c5i_A 38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF-----N--- 108 (369)
T ss_dssp EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE-----T---
T ss_pred EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec-----C---
Confidence 3567788889999998753 1268899987543221 122457888888875333 44666542 1
Q ss_pred eEEEEEeeccCCC
Q 001908 755 FKALVYEYMQNGS 767 (997)
Q Consensus 755 ~~~lv~e~~~~gs 767 (997)
.++||||++|.+
T Consensus 109 -~~~v~e~i~G~~ 120 (369)
T 3c5i_A 109 -GGRIEEWLYGDP 120 (369)
T ss_dssp -TEEEEECCCSEE
T ss_pred -CcEEEEEecCCc
Confidence 268999998754
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.06 E-value=0.033 Score=61.02 Aligned_cols=31 Identities=19% Similarity=0.341 Sum_probs=27.7
Q ss_pred CCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 809 PPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 809 ~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888999999987753
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.92 E-value=0.076 Score=52.86 Aligned_cols=102 Identities=18% Similarity=0.118 Sum_probs=65.8
Q ss_pred CHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccchhcccCCCC
Q 001908 767 SLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARFLFARPFD 846 (997)
Q Consensus 767 sL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~~~~~~~~ 846 (997)
+|.+.+...+ .++++.++|.++.|.+++|.-+-.+.. . ..+=+.|..|++..+|.|...+ +.+.
T Consensus 34 SL~eIL~~~~-----~PlsEEqaWALc~Qc~~~L~~~~~~~~-~-~~~i~~~~~i~l~~dG~V~f~~-~~s~-------- 97 (229)
T 2yle_A 34 SLEEILRLYN-----QPINEEQAWAVCYQCCGSLRAAARRRQ-P-RHRVRSAAQIRVWRDGAVTLAP-AADD-------- 97 (229)
T ss_dssp EHHHHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHHTTC-C-CCCCCSGGGEEEETTSCEEECC-C-----------
T ss_pred cHHHHHHHcC-----CCcCHHHHHHHHHHHHHHHHhhhhccc-C-CceecCCcceEEecCCceeccc-cccc--------
Confidence 7999999876 269999999999999999877622111 1 1223446889999999998774 2110
Q ss_pred CccccccccccccccccccCCcchhcccccCccccCCCCCCCccchhHHHHHHHHHHHhCCCC
Q 001908 847 TSMETQSSSIGIKGTVGYVPPGNIAKMLNLPCLEYGMGSEASVTGDVYSLGVMLLEMFTRRRP 909 (997)
Q Consensus 847 ~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~e~~~~~~~~~~~DvwSlGvvl~elltg~~P 909 (997)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ------------~~~~~~~~pe~~~-------------~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGY-------------SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ---------------------CCSS-------------SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ------------ccccCCCChhhcc-------------ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123456775431 3456788899999999999874444
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.68 E-value=0.34 Score=53.77 Aligned_cols=145 Identities=12% Similarity=0.122 Sum_probs=82.4
Q ss_pred CCcccccCcceEEEEEECC-------CCcEEEEEEecccchh-----------h-------HHHHHHHHHHHhhcC-CCC
Q 001908 684 SNMIGQGSFGSVYKGILGE-------NGTFVAVKILNLMQKG-----------A-------LKSFVAECEVLRNTR-HRN 737 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~-------~~~~vAvK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~n 737 (997)
.+.|..|-...+|++.... .++.|.+++.-...+. . .+....|.++++.+. +.-
T Consensus 57 v~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi 136 (401)
T 3f2s_A 57 ISVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSL 136 (401)
T ss_dssp EEEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTS
T ss_pred EEEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCC
Confidence 3456678888999988752 1467888887432211 0 112235888888874 444
Q ss_pred cceEEeeeeccCcCCCceEEEEEeeccCCCHHH-----------------HhhcCCCCCCcCCCC--HHHHHHHHHHHH-
Q 001908 738 LIKIITVCSSIDFKGADFKALVYEYMQNGSLEE-----------------WLHQSNGQPEVCDLS--LIQRLNIAIDMA- 797 (997)
Q Consensus 738 iv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~-----------------~l~~~~~~~~~~~~~--~~~~~~i~~~i~- 797 (997)
..++++++ .+ .+|+||++|.+|.. .++.... +-..... +..+.++..++.
T Consensus 137 ~Pkl~~~~-----~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~-~~~~~~~~l~~~i~~~~~~l~~ 206 (401)
T 3f2s_A 137 GPKLYGIF-----PQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKM-PFNKEPKWLFGTMEKYLKEVLR 206 (401)
T ss_dssp SCCEEEEE-----TT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCC-SSCCSCCHHHHHHHHHHHHHHH
T ss_pred CCeEEEEe-----CC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCC-CCCCCcchHHHHHHHHHHHHHh
Confidence 56677652 21 28999998654321 1222110 1011122 223333333221
Q ss_pred ---------------------HHH----HHHhhC-CCCCcEecCCCCCCeeeCCC------CcEEEcccccch
Q 001908 798 ---------------------SAI----EYLHHH-CQPPIVHGDLKPSNVLLDHD------MVAHVSDFGLAR 838 (997)
Q Consensus 798 ---------------------~~L----~yLH~~-~~~~ivHrDlk~~NIll~~~------~~~kl~DFg~a~ 838 (997)
..+ +++... ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 207 IKFTEESRIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS 279 (401)
T ss_dssp CCCCSHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE
T ss_pred ccCcchhhhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCC
Confidence 112 223222 12379999999999999887 799999999874
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.20 E-value=0.12 Score=58.11 Aligned_cols=145 Identities=15% Similarity=0.132 Sum_probs=84.4
Q ss_pred CCcccccCcceEEEEEECCC-------CcEEEEEEecccchhhHHHHHHHHHHHhhcC-CCCcceEEeeeeccCcCCCce
Q 001908 684 SNMIGQGSFGSVYKGILGEN-------GTFVAVKILNLMQKGALKSFVAECEVLRNTR-HRNLIKIITVCSSIDFKGADF 755 (997)
Q Consensus 684 ~~~lg~G~~g~V~~~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~l~~~~~~~~~~~~~~ 755 (997)
.+.+..|-...+|+...... ++.|++|+....... ..+..+|.++++.+. +.-..++++.+ .
T Consensus 75 v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~---------~ 144 (424)
T 3mes_A 75 VKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF---------P 144 (424)
T ss_dssp EEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE---------T
T ss_pred EEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc---------C
Confidence 45677788899999987521 578999987543221 123357888888874 33345555532 1
Q ss_pred EEEEEeeccCCCHHH-----------------HhhcCC----CCC---CcCCCCHHHHHHHHHHH---------------
Q 001908 756 KALVYEYMQNGSLEE-----------------WLHQSN----GQP---EVCDLSLIQRLNIAIDM--------------- 796 (997)
Q Consensus 756 ~~lv~e~~~~gsL~~-----------------~l~~~~----~~~---~~~~~~~~~~~~i~~~i--------------- 796 (997)
.+.|+||++|.++.. .+|... +.+ ...+.-+.++.++..++
T Consensus 145 ~~~I~efI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~ 224 (424)
T 3mes_A 145 EGRIEEFIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKEL 224 (424)
T ss_dssp TEEEEECCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHH
T ss_pred CCEEEEEeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhcccc
Confidence 268999998865311 111110 001 11111233333333222
Q ss_pred ----HHHHHHHhhC---------------------CCCCcEecCCCCCCeeeCCCCcEEEcccccchh
Q 001908 797 ----ASAIEYLHHH---------------------CQPPIVHGDLKPSNVLLDHDMVAHVSDFGLARF 839 (997)
Q Consensus 797 ----~~~L~yLH~~---------------------~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~~ 839 (997)
...+++|.+. ....++|+|+.+.||+ +.++.+.++||..|..
T Consensus 225 ~~~l~~e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 225 YSKILEEIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2233333211 1236899999999999 8889999999998853
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.94 E-value=0.71 Score=51.52 Aligned_cols=30 Identities=23% Similarity=0.425 Sum_probs=25.4
Q ss_pred CcEecCCCCCCeee------CCCCcEEEcccccchh
Q 001908 810 PIVHGDLKPSNVLL------DHDMVAHVSDFGLARF 839 (997)
Q Consensus 810 ~ivHrDlk~~NIll------~~~~~~kl~DFg~a~~ 839 (997)
.++|+|+.+.||++ +++..++++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 36799999999999 4567899999998853
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=80.23 E-value=0.22 Score=56.76 Aligned_cols=60 Identities=13% Similarity=0.084 Sum_probs=17.4
Q ss_pred cCCcccccCcceEEEEEECCCCcEEEE------EEecc--cchhhHHHHHHHHHHHhhcCCCCcceEEeee
Q 001908 683 SSNMIGQGSFGSVYKGILGENGTFVAV------KILNL--MQKGALKSFVAECEVLRNTRHRNLIKIITVC 745 (997)
Q Consensus 683 ~~~~lg~G~~g~V~~~~~~~~~~~vAv------K~~~~--~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~ 745 (997)
..+++| ||+||+|.+.....+||| |..+. ...+....+.+|..+++..+|+|+++..++.
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 456776 999999999755568898 66543 2233445788899999999999999988764
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=77.39 E-value=2.7 Score=41.72 Aligned_cols=50 Identities=14% Similarity=0.190 Sum_probs=42.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHhhCCCCCcEecCCCCCCeeeCCCCcEEEcccccch
Q 001908 784 LSLIQRLNIAIDMASAIEYLHHHCQPPIVHGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 784 ~~~~~~~~i~~~i~~~L~yLH~~~~~~ivHrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
.+...+++++..|+....+++.. +|--+.|+|++++.++.+++.-.|.-.
T Consensus 78 ~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~NL~f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 78 FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPDELFFTRDGLPIAKTRGLQN 127 (215)
T ss_dssp SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGGGEEECTTSCEEESCCEETT
T ss_pred cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecceEEEcCCCCEEEEEccCcc
Confidence 67789999999999988666654 688899999999999999999877653
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=64.76 E-value=10 Score=37.77 Aligned_cols=84 Identities=13% Similarity=0.146 Sum_probs=57.2
Q ss_pred CCCCcceEEeeeeccCcCCCceEEEEEeeccCCCHHHHhhcCCCCCCcCCCCHHHHHHHHHHHHHHHH-HHhhCCCCCcE
Q 001908 734 RHRNLIKIITVCSSIDFKGADFKALVYEYMQNGSLEEWLHQSNGQPEVCDLSLIQRLNIAIDMASAIE-YLHHHCQPPIV 812 (997)
Q Consensus 734 ~h~niv~l~~~~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~~~~~i~~~i~~~L~-yLH~~~~~~iv 812 (997)
.||+...-+. ..++...+.++.-+++.=...+++ .+...+++++..|+.... +++.. +
T Consensus 48 ~~~~f~~~I~-------~~eD~~~i~y~~~~~~~~f~~i~~---------~~~~eKlrll~nl~~L~~~~~~~r-----~ 106 (219)
T 4ano_A 48 VDPCIVRDID-------VSEDEVKVVIKPPSSFLTFAAIRK---------TTLLSRIRAAIHLVSKVKHHSARR-----L 106 (219)
T ss_dssp SCSSSEEEEE-------ECSSEEEEEEECCTTCEEHHHHHT---------SCHHHHHHHHHHHHHHHSSCCSSS-----E
T ss_pred cCCCCCeEEE-------EeCCEEEEEEEcCcccCcHHHHHh---------cCHHHHHHHHHHHHHHHHHhhhCc-----e
Confidence 5777722222 234566666665433322223332 567899999999888776 55544 7
Q ss_pred ecCCCCCCeeeCCCCcEEEcccccch
Q 001908 813 HGDLKPSNVLLDHDMVAHVSDFGLAR 838 (997)
Q Consensus 813 HrDlk~~NIll~~~~~~kl~DFg~a~ 838 (997)
|--+.|+|++++.++.+++.-.|.-.
T Consensus 107 tf~l~P~NL~f~~~~~p~i~hRGi~~ 132 (219)
T 4ano_A 107 IFIVCPENLMFNRALEPFFLHVGVKE 132 (219)
T ss_dssp ECCCCGGGEEECTTCCEEESCCEETT
T ss_pred eEEEeCceEEEeCCCcEEEEEcCCcc
Confidence 88899999999999999999888654
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.52 E-value=1.8 Score=30.84 Aligned_cols=7 Identities=43% Similarity=0.994 Sum_probs=2.7
Q ss_pred eeeeecc
Q 001908 645 VYARRRR 651 (997)
Q Consensus 645 ~~~~r~~ 651 (997)
+|.+||+
T Consensus 33 ~~~RRr~ 39 (44)
T 2ks1_B 33 LFMRRRH 39 (44)
T ss_dssp HHHHTTT
T ss_pred HHhhhhH
Confidence 3344433
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=31.37 E-value=58 Score=27.72 Aligned_cols=45 Identities=20% Similarity=0.061 Sum_probs=24.6
Q ss_pred CcCCCCCCCCCCCCCcEEeccCccCCCcccccccccCccCeeEccC
Q 001908 255 FSGSIPESFSNASNIEIIDLPINYFTGKVSIIFGRLKNLWSLDLGI 300 (997)
Q Consensus 255 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 300 (997)
++..-..+|.++++|+.+.+..+ ++.+-..+|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 33334455666666666666543 4444455555555555555544
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=30.37 E-value=3.7 Score=29.12 Aligned_cols=9 Identities=22% Similarity=0.431 Sum_probs=3.8
Q ss_pred eeeeeeccc
Q 001908 644 IVYARRRRS 652 (997)
Q Consensus 644 ~~~~~r~~~ 652 (997)
.+|.+||+.
T Consensus 32 ~~~~RRR~~ 40 (44)
T 2jwa_A 32 GILIKRRQQ 40 (44)
T ss_dssp HHHHHHHCS
T ss_pred Hhheehhhh
Confidence 344444443
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=25.10 E-value=1.2e+02 Score=25.66 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=5.0
Q ss_pred hhcCCCCCCeEEe
Q 001908 413 SLGNLTLMTDLFL 425 (997)
Q Consensus 413 ~~~~l~~L~~L~L 425 (997)
.|.++.+|+.+.+
T Consensus 38 aF~~C~~L~~i~~ 50 (100)
T 2lz0_A 38 MFSGCTALEKLIL 50 (100)
T ss_dssp SSTTCTTCCCEEE
T ss_pred HHhccCCccEEEE
Confidence 3333333333333
No 455
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=23.13 E-value=17 Score=20.62 Aligned_cols=9 Identities=33% Similarity=1.213 Sum_probs=7.1
Q ss_pred CCCeeeeee
Q 001908 60 NLCQWAGVT 68 (997)
Q Consensus 60 ~~c~w~gv~ 68 (997)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999974
No 456
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=21.60 E-value=7.9 Score=27.47 Aligned_cols=7 Identities=57% Similarity=1.103 Sum_probs=2.7
Q ss_pred eeeeecc
Q 001908 645 VYARRRR 651 (997)
Q Consensus 645 ~~~~r~~ 651 (997)
+|.+||+
T Consensus 32 ~~~RRRr 38 (44)
T 2l2t_A 32 VYVRRKS 38 (44)
T ss_dssp HHHHTTC
T ss_pred HHhhhhh
Confidence 3333333
Done!