BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001912
(997 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus
GN=Zranb3 PE=1 SV=1
Length = 1069
Score = 277 bits (709), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 180/486 (37%), Positives = 265/486 (54%), Gaps = 44/486 (9%)
Query: 193 LPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPA 252
LP L +LPFQ +G+ F LRR GRC++ADEMGLGKT+QAIAIA + +L+V P+
Sbjct: 29 LPDKLRTKLLPFQKDGIVFALRRDGRCMVADEMGLGKTIQAIAIAYFYKEEWPLLIVVPS 88
Query: 253 ILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFP--RVVVISYTMLHRLRKSMIE 310
LR W EELE+W+P P +I++V N + R P RV V+ Y +L +++++
Sbjct: 89 SLRYPWIEELEKWIPELEPEEINVVM----NKTDIGRIPGSRVTVLGYGLLTTDAETLLD 144
Query: 311 ----QDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFH 366
Q++ ++IVDESH+++ RT+ K +L + K +R +LL+GTP+L RP ++F
Sbjct: 145 ALNTQNFRVVIVDESHYMK--SRTAA--RSKILLPMVQKARRAILLTGTPALGRPEELFM 200
Query: 367 QINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQ-DFSKGVRLEELNVLLKQTVMIRR 425
QI L+P G ++AK YC+ Y G+ Q D L EL+ LL +MIRR
Sbjct: 201 QIEALFPQKFG-TWIEYAKRYCNAHV--RYFGKRRQWDCRGASNLSELHQLLND-IMIRR 256
Query: 426 LKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDS-EKDATNDKTPKDSDEHDDSG 484
LK +L QLPPK RQ I L AAV +N S E+ + P G
Sbjct: 257 LKSEVLSQLPPKVRQRIPFDL-------PPAAVKELNASFEEWQKLMRAPNSGAMETVMG 309
Query: 485 ACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLD 544
R+ +++ IAK ++++ + + ++D S K ++FAHHL +L
Sbjct: 310 LITRM----FKQTAIAKAGAVKDYIKM---LLQND----------SLKFLVFAHHLSMLQ 352
Query: 545 GVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNV 604
E + E ++RIDG+ +R V+ FQ + ++AI+ I A G GL F++A +V
Sbjct: 353 ACTEAVIESKSRYIRIDGSVPSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTAASHV 412
Query: 605 VFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNG 664
VF EL P + QAEDRAHR GQ S+VNI+ A T D W LN+ + S NG
Sbjct: 413 VFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDSLMWAMLNRKAQVTGSTLNG 472
Query: 665 KYDALQ 670
+ + LQ
Sbjct: 473 RKEKLQ 478
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 148/361 (40%), Gaps = 80/361 (22%)
Query: 676 GVSYLEMSDKTDRGSEDLTLDQVASSDQ--FQELMKVPESSEASDFRAINTNDEITAKMN 733
G ++L+ ++K D ED + + SDQ + + PE EA E +A
Sbjct: 649 GRNHLQDNNKND---EDAAQESTSKSDQAGLECERQCPERLEA----------EQSANSK 695
Query: 734 DKLLEESKTDHSPTETDDHHNN--------------VSQYTGRIHLYSCVPGTDSRPRPL 779
++ LE D P++ + N S+ T RIHLY+ +P+
Sbjct: 696 EEALEGGGEDRLPSQPEIGQLNNSGTLPVRETFMFCASRNTDRIHLYT------KDGKPM 749
Query: 780 FESFRPEE--LDNTEHISGC--LKENPGYRHAIQAFINEWNALRPIERTKLLGKPLQLPL 835
+F P + LD E + LK+N R I F+ EW++L +++ ++L K QL
Sbjct: 750 NCNFIPLDIKLDLWEDLPATFQLKQN---RSLILRFVREWSSLTAMKQ-RVLRKSGQLFC 805
Query: 836 SVELC----------------YL-KETINHSSGGLLK--GGSKRRTTPSLEISHPLPSGA 876
S L Y+ KE + +S +K GG R T + +
Sbjct: 806 SPLLASEEITKQQAKENNTRRYITKEDVAKASMNKVKSDGGHIRLIT-----KESMTQDS 860
Query: 877 EWKKV--------RICSGSRKKE----KEYTQGWTINDEPLCKLCQK-TCKSKNAKNAEY 923
KK+ C E K Y Q PLC CQ TC+ + A
Sbjct: 861 SLKKIDSACVPSLNPCPADLTVEPSPSKGYIQAVDKEGRPLCLRCQHPTCQPEQTAKASA 920
Query: 924 FEDLFCNLDCYEEYRLRTSGRFLREELFRIEHGVCTNCQLDCHKLVKHIKPLSLEQRRKY 983
++ FC+L C EE+ +R++ +LR ++F EHGVC +C +D +L ++ R+
Sbjct: 921 WDSRFCSLKCQEEFWIRSNNSYLRAQVFATEHGVCQHCGVDAQELFLRMRDAPKSHRKSL 980
Query: 984 I 984
+
Sbjct: 981 L 981
>sp|Q5FWF4|ZRAB3_HUMAN DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens
GN=ZRANB3 PE=1 SV=2
Length = 1079
Score = 276 bits (706), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 176/496 (35%), Positives = 265/496 (53%), Gaps = 42/496 (8%)
Query: 187 DEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSI 246
D ++ LP L +LPFQ +G+ F L+R GRC++ADEMGLGKT+QAI I + +
Sbjct: 23 DNLLDFLPDRLRAKLLPFQKDGIIFALKRNGRCMVADEMGLGKTIQAIGITYFYKEEWPL 82
Query: 247 LVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRK 306
L+V P+ LR W EE+E+W+P P +I+++ V +V V+ Y +L K
Sbjct: 83 LIVVPSSLRYPWTEEIEKWIPELSPEEINVI--QNKTDVRRMSTSKVTVLGYGLLTADAK 140
Query: 307 SMIE----QDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPY 362
++I+ Q++ ++IVDESH+++ T + +L + K +R +LL+GTP+L RP
Sbjct: 141 TLIDALNNQNFKVVIVDESHYMKSRNATRS----RILLPIVQKARRAILLTGTPALGRPE 196
Query: 363 DIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQ-DFSKGVRLEELNVLLKQTV 421
++F QI L+P G+ D+AK YC+ Y G+ Q D L EL+ LL +
Sbjct: 197 ELFMQIEALFPQKFGRWT-DYAKRYCNAHI--RYFGKRPQWDCRGASNLNELHQLLSD-I 252
Query: 422 MIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDS-EKDATNDKTPKDSDEH 480
MIRRLK +L QLPPK RQ I L AA +N S E+ +TP
Sbjct: 253 MIRRLKTEVLTQLPPKVRQRIPFDL-------PSAAAKELNTSFEEWEKIMRTPNSGAME 305
Query: 481 DDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHL 540
G R+ +++ IAK ++++ + + ++D S K ++FAHHL
Sbjct: 306 TVMGLITRM----FKQTAIAKAGAVKDYIKM---MLQND----------SLKFLVFAHHL 348
Query: 541 KVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSS 600
+L E + E ++RIDG+ +R V+ FQ + ++AI+ I A G GL F++
Sbjct: 349 SMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQAAGQGLTFTA 408
Query: 601 AQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSS 660
A +VVF EL P + QAEDRAHR GQ S+VNI+ A T D W LN+ + S
Sbjct: 409 ASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGS 468
Query: 661 ATNGKYDALQEIAVEG 676
NG+ + +Q A EG
Sbjct: 469 TLNGRKEKIQ--AEEG 482
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 1/94 (1%)
Query: 892 KEYTQGWTINDEPLCKLCQK-TCKSKNAKNAEYFEDLFCNLDCYEEYRLRTSGRFLREEL 950
K Y Q PLC CQ+ TC++K A A ++ FC+L C EE+ +R++ +LR ++
Sbjct: 898 KGYLQAVDNEGNPLCLRCQQPTCQTKQACKANSWDSRFCSLKCQEEFWIRSNNSYLRAKV 957
Query: 951 FRIEHGVCTNCQLDCHKLVKHIKPLSLEQRRKYI 984
F EHGVC C ++ +L ++ QR+ +
Sbjct: 958 FETEHGVCQLCNVNAQELFLRLRDAPKSQRKNLL 991
>sp|E1BB03|ZRAB3_BOVIN DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus
GN=ZRANB3 PE=3 SV=3
Length = 1074
Score = 273 bits (699), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 177/490 (36%), Positives = 261/490 (53%), Gaps = 42/490 (8%)
Query: 193 LPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPA 252
LP L +LPFQ +G+ F LRR GRC++ADEMGLGKT+QAI IA + +L+V P+
Sbjct: 29 LPDKLRAKLLPFQKDGITFALRRDGRCMVADEMGLGKTVQAIGIAYFYKEEWPLLIVVPS 88
Query: 253 ILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIE-- 310
LR W EE+E+W+P P +I+++ V +V V+ Y +L +++I+
Sbjct: 89 SLRYPWTEEIEKWIPELSPEEINVI--QNKTDVGRISTSKVTVLGYGLLTTDAETLIDAL 146
Query: 311 --QDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQI 368
Q++ ++IVDESH+++ T + +L + K KR +LL+GTP+L RP ++F QI
Sbjct: 147 NNQNFKVVIVDESHYMKSRSATRS----RILLPIVQKAKRAILLTGTPALGRPEELFMQI 202
Query: 369 NMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQ-DFSKGVRLEELNVLLKQTVMIRRLK 427
L+P G ++AK YC+ Y G+ Q D L EL+ LL +MIRRLK
Sbjct: 203 EALFPQKFGTWT-EYAKRYCNAHV--RYFGRRSQWDCRGASNLNELHQLLSD-IMIRRLK 258
Query: 428 QHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDS-EKDATNDKTPKDSDEHDDSGAC 486
+L QLPPK RQ I L AA +N S E+ + P G
Sbjct: 259 TEVLTQLPPKIRQRIPFDL-------PSAAAKELNSSFEEWEKLMRDPYSGATETVMGLI 311
Query: 487 CRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGV 546
R+ +++ IAK ++++ + + ++D S K ++FAHHL +L
Sbjct: 312 TRM----FKQTAIAKAGAVKDYIKM---MLQND----------SLKFLVFAHHLSMLQAC 354
Query: 547 QEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVF 606
E + E ++RIDG+ +R V+ FQ E ++AI+ I A G GL F++A +VVF
Sbjct: 355 TEAVIENKTRYIRIDGSVPSSERIHLVNQFQKDPETRVAILSIQAAGQGLTFTAATHVVF 414
Query: 607 LELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKY 666
EL P + QAEDRAHR GQ S+VNI+ A T D W LN+ + S NG+
Sbjct: 415 AELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGMLNRKAQVTGSTLNGRK 474
Query: 667 DALQEIAVEG 676
+ LQ A EG
Sbjct: 475 EKLQ--AEEG 482
Score = 71.2 bits (173), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 892 KEYTQGWTINDEPLCKLCQK-TCKSKNAKNAEYFEDLFCNLDCYEEYRLRTSGRFLREEL 950
K Y Q PLC CQ+ TC++K + A+ ++ FC+L C EE+ +R++ +LR ++
Sbjct: 893 KGYLQAVDNEGNPLCLRCQQPTCQTKQERKADAWDSRFCSLKCQEEFWIRSNNSYLRAKV 952
Query: 951 FRIEHGVCTNCQLDCHKLVKHIKPLSLEQRRKYI 984
F IEHGVC C L+ +L ++ QR+ +
Sbjct: 953 FEIEHGVCQLCNLNAQELFLRLRDAPKSQRKSLL 986
>sp|Q498E7|SMAL1_XENLA SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Xenopus laevis
GN=smarcal1 PE=2 SV=1
Length = 960
Score = 259 bits (663), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 176/538 (32%), Positives = 279/538 (51%), Gaps = 62/538 (11%)
Query: 130 YKLRDYNPVLTCLKNSAGIEVEGIPWVTLNVV----EKLSHSIDTGRWNPCRPEHLSDEV 185
+ L DY ++ ++N +EVE +P L EK + S+ E+
Sbjct: 396 FMLEDYQKLMESVRNIQQVEVEPLPRPVLQAFAPQFEKTTISLA--------------EI 441
Query: 186 VDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGS 245
D + + L+ ++PFQ +GV F + R GR L+AD+MGLGKT+QAI IAA +
Sbjct: 442 EDVDLSHVDSKLIGNLMPFQRDGVNFAISREGRLLLADDMGLGKTIQAICIAAYYRKEWP 501
Query: 246 ILVVCPAILRLSWAEELERWLPFCLPADIH-LVFGHRNNPVHLTRFPRVVVISYTMLHRL 304
+LVV P+ +R +WAE RWLP P ++ +V G + +L + +IS+ +L ++
Sbjct: 502 LLVVAPSSVRFTWAEAFHRWLPSLNPESVNVIVTGRDSQSANL-----INIISFDLLGKM 556
Query: 305 RKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDI 364
K I ++ ++I+DESH ++ K KA + + KR++LLSGTP++SRP ++
Sbjct: 557 DK-QIAANFKVIIIDESHFLKNVKTA----RCKAAMPLLKSAKRVMLLSGTPAMSRPAEL 611
Query: 365 FHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIR 424
+ QI + P + +DF YCD K Q D+S L EL +LL++++MIR
Sbjct: 612 YTQIAAVRPTFFPRF-HDFGIRYCDAK-----QMPWGWDYSGSSNLNELKLLLEESIMIR 665
Query: 425 RLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSG 484
RLK +L QLP K+R+++ +V+ + + A + + +
Sbjct: 666 RLKSEVLSQLPAKQRKMV--------VVAPEGITAKTKAALAAAAKEMAKGFKSKVQEKE 717
Query: 485 ACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDV-NPRSNKMIIFAHHLKVL 543
A + Y AK+ E++ ID+ K ++FAHH VL
Sbjct: 718 ALL----LFYNRTAEAKIRSVLEYI--------------IDLLESGREKFLVFAHHKLVL 759
Query: 544 DGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQN 603
D + E + +K + ++RIDGNT DRQS H FQ S + +A++ ITA +GL SSA
Sbjct: 760 DNICEELGKKEVPYIRIDGNTSSADRQSLCHKFQFSEKSCVAVLSITAANMGLTLSSADL 819
Query: 604 VVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSA 661
VVF EL +P +++QAEDR HR GQTS+VNI+ AK T D+ W + + ++ + A
Sbjct: 820 VVFAELFWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQA 877
>sp|Q0P4U8|SMAL1_XENTR SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Xenopus
tropicalis GN=smarcal1 PE=2 SV=1
Length = 942
Score = 258 bits (660), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 171/532 (32%), Positives = 281/532 (52%), Gaps = 50/532 (9%)
Query: 130 YKLRDYNPVLTCLKNSAGIEVEGIPWVTLNVVEKLSHSIDTGRWNPCRPEHLSDEVVDEM 189
+ L DY ++ ++N +EVE +P L + + G+ R +E+ +
Sbjct: 378 FMLEDYQKLMESVRNIQQVEVEPLPRPVLQ-----AFAPQFGKTTIIR-----EEIPEVD 427
Query: 190 IGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVV 249
+ ++ L ++PFQ +GV F + R GR L+AD+MGLGKT+QAI IAA + +LVV
Sbjct: 428 LSQVDSKLGSNLMPFQRDGVNFAVSREGRLLLADDMGLGKTIQAICIAAYYRKEWPLLVV 487
Query: 250 CPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMI 309
P+ +R +WAE +RWLP P ++++ R++ + ++S+ +L ++ K I
Sbjct: 488 APSSVRFTWAEAFQRWLPSIRPESVNVIVTGRDS----QSASLINIVSFDLLGKMDK-QI 542
Query: 310 EQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQIN 369
+ ++I+DESH ++ K KA + + KR++LLSGTP++SRP +++ QI
Sbjct: 543 AATFQVIIIDESHFLKNVKTA----RCKAAMPLLKSAKRVMLLSGTPAMSRPAELYTQIA 598
Query: 370 MLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQH 429
+ P + +DF YCD K Q D+S L EL +LL++++MIRRLK
Sbjct: 599 AVRPSFFPRF-HDFGIRYCDAK-----QMPWGWDYSGSSNLNELKLLLEESIMIRRLKSE 652
Query: 430 LLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRL 489
+L QLP K+R+++ +V+ + + A + + + A
Sbjct: 653 VLSQLPAKQRKMV--------VVAPEGITAKTKAALAAAAKEMAKGFKSKVQEKEALL-- 702
Query: 490 GKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEF 549
+ Y AK+ E++ D+ + R K ++FAHH VLD + E
Sbjct: 703 --LFYNRTAEAKIRSVLEYI------------MDLLESGR-EKFLVFAHHKLVLDHICEE 747
Query: 550 ISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLEL 609
+ +K + ++RIDGNT DRQS H FQ+S + +A++ ITA +GL SSA VVF EL
Sbjct: 748 LGKKDVPYIRIDGNTSSADRQSLCHKFQMSEKSCVAVLSITAANMGLTLSSADLVVFAEL 807
Query: 610 PQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSA 661
+P +++QAEDR HR GQTS+VNI+ AK T D+ W + + ++ + A
Sbjct: 808 FWNPGVLIQAEDRVHRIGQTSSVNIHYLVAKGTADDYLWPMIQEKIKVLGQA 859
>sp|B2ZFP3|SMAL1_DANRE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Danio rerio
GN=smarcal1 PE=2 SV=1
Length = 807
Score = 250 bits (639), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 174/521 (33%), Positives = 268/521 (51%), Gaps = 51/521 (9%)
Query: 129 VYKLRDYNPVLTCLKNSAGIEVEGIPWVTLNVVEKLSHSIDTGRWNPCRPEHLSDEVVDE 188
+ L DY ++ L +E E +P L S T P PE +D
Sbjct: 277 TFLLEDYGKLMADLNELPTVETEPLPHAVLQSFS--SQFEKTQSQAPVPPE--AD----- 327
Query: 189 MIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILV 248
+ + L ++PFQ +GV F + R GR L+AD+MGLGKT+QAI IAA + S +LV
Sbjct: 328 -LSHIDPQLTRSLMPFQRDGVNFAVSREGRLLLADDMGLGKTVQAICIAAYYRSEWPLLV 386
Query: 249 VCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSM 308
V P+ +R +WAE RWLP P I++V +++ R + +ISY +L+++ K
Sbjct: 387 VAPSSVRFTWAEAFRRWLPSVKPDSINVVVKGKDS----LRSGLINIISYDLLNKMDKQP 442
Query: 309 IEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQI 368
+ ++I+DESH ++ K +A L + KR++LLSGTP++SRP +++ QI
Sbjct: 443 PSSPFNVIIMDESHFLKNMKTA----RCRAALPLLKTAKRVILLSGTPAMSRPAELYTQI 498
Query: 369 NMLWPGLLGKAKYDFAKTYCDVKTVQ-GYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLK 427
+ P L + +DF YCD K + G+ D+S L EL +LL++++M+RRLK
Sbjct: 499 QAVRPALFPRF-HDFGTRYCDAKQLPWGW------DYSSSSNLTELKLLLEESLMLRRLK 551
Query: 428 QHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACC 487
+L QLP K+R+++ + IN K A N + + + +
Sbjct: 552 SEVLSQLPAKQRKVVTV------------TTDGINSRTKAALNAAARELAKGYHNKSQEK 599
Query: 488 RLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQ 547
+ + AK+ E++S D+ R K ++FAHH VLD +
Sbjct: 600 EALLVFFNHTAEAKIRAIMEYIS------------DMLECGR-EKFLVFAHHKLVLDSIT 646
Query: 548 EFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFL 607
+ + EK I F+RIDG+T +RQ FQ S + +A++ ITA +GL SA VVF
Sbjct: 647 KELGEKSISFIRIDGSTPSAERQLLCERFQASQQSCVAVLSITAANMGLTLHSAALVVFA 706
Query: 608 ELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHW 648
EL +P +++QAEDR HR GQTS V+I+ AK T D+ W
Sbjct: 707 ELFWNPGVLIQAEDRVHRIGQTSNVDIHYLVAKGTADDYLW 747
>sp|Q9NZC9|SMAL1_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Homo sapiens
GN=SMARCAL1 PE=1 SV=1
Length = 954
Score = 244 bits (624), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 169/508 (33%), Positives = 276/508 (54%), Gaps = 53/508 (10%)
Query: 181 LSDEVVDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACF 240
L+ +V + + ++ L+ ++PFQ GV F + +GGR L+AD+MGLGKT+QAI IAA +
Sbjct: 416 LTPDVPEADLSEVDPKLVSNLMPFQRAGVNFAIAKGGRLLLADDMGLGKTIQAICIAAFY 475
Query: 241 ISAGSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTM 300
+LVV P+ +R +W + RWLP P I++V ++ LT + ++S+ +
Sbjct: 476 RKEWPLLVVVPSSVRFTWEQAFLRWLPSLSPDCINVVVTGKD---RLTA-GLINIVSFDL 531
Query: 301 LHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSR 360
L +L K + + + ++I+DESH ++ S RT+ VL VA KR++LLSGTP++SR
Sbjct: 532 LSKLEKQL-KTPFKVVIIDESHFLKNS-RTARCRAAMPVLKVA---KRVILLSGTPAMSR 586
Query: 361 PYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQ-GYQGQLFQDFSKGVRLEELNVLLKQ 419
P +++ QI + P + + F YCD K + G+ D+S L EL +LL++
Sbjct: 587 PAELYTQIIAVKPTFFPQF-HAFGLRYCDAKRMPWGW------DYSGSSNLGELKLLLEE 639
Query: 420 TVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDE 479
VM+RRLK +L QLP K+R+I+ + R ++A+ + +++ T DKT +
Sbjct: 640 AVMLRRLKSDVLSQLPAKQRKIVVIAPGR---INARTRAALDAAAKEMTTKDKT---KQQ 693
Query: 480 HDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHH 539
D+ + + AK+ E++ D+ + R K ++FAHH
Sbjct: 694 QKDALI------LFFNRTAEAKIPSVIEYI------------LDLLESGR-EKFLVFAHH 734
Query: 540 LKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFS 599
VLD + + + K + +RIDG+T +R+ FQLS +A++ ITA +GL FS
Sbjct: 735 KVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITAANMGLTFS 794
Query: 600 SAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVS 659
SA VVF EL +P +++QAEDR HR GQTS+V I+ AK T D+ W + + ++
Sbjct: 795 SADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLIQEKIKV-- 852
Query: 660 SATNGKYDALQEIAVEGVSYLEMSDKTD 687
L E + ++ EM++ TD
Sbjct: 853 ---------LAEAGLSETNFSEMTESTD 871
>sp|B4F769|SMAL1_RAT SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Rattus
norvegicus GN=Smarcal1 PE=2 SV=1
Length = 910
Score = 234 bits (598), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 164/492 (33%), Positives = 265/492 (53%), Gaps = 54/492 (10%)
Query: 197 LLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPAILRL 256
L+ ++PFQ EGV F + + GR L+AD+MGLGKT+QAI IAA + +LVV P+ +R
Sbjct: 389 LVSNLMPFQREGVSFAISKRGRLLLADDMGLGKTIQAICIAAFYRKEWPLLVVVPSSVRF 448
Query: 257 SWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQDWALL 316
+W + RWLP P DI++V + LT V ++S+ +L +L K + + + ++
Sbjct: 449 TWEQAFLRWLPSLSPEDINVVVTGKG---RLTA-GLVNIVSFDLLSKLEKQL-KTPFKVV 503
Query: 317 IVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLL 376
I+DESH ++ K +A + + KR++LLSGTP++SRP +++ QI + P
Sbjct: 504 IIDESHFLKNIKTA----RCRAAVPILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFF 559
Query: 377 GKAKYDFAKTYCDVKTVQ-GYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLP 435
+ + F YCD K + G+ D+S L EL +LL++ VM+RRLK +L QLP
Sbjct: 560 PQF-HAFGLRYCDAKRLPWGW------DYSGSSNLGELKLLLEEAVMLRRLKSDVLSQLP 612
Query: 436 PKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKISYQ 495
K+R+++ + R +S +A ++ + K+ T DKT + E + +
Sbjct: 613 AKQRKMVVVNPGR---ISTRAKA-ALDAAAKEMTKDKTKQQQKEA---------LLVFFN 659
Query: 496 ELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGI 555
AK+ E++ D+ + R K ++FAHH +LD + + + K +
Sbjct: 660 RTAEAKIPCVIEYI------------LDLLESGR-EKFLVFAHHKVLLDAIAKELERKNV 706
Query: 556 GFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSL 615
+RIDG+T DR+ FQLS +A++ ITA +GL FSSA VVF EL +P +
Sbjct: 707 QHIRIDGSTPSADREDLCQQFQLSKGHTVAVLSITAANMGLTFSSADLVVFAELFWNPGV 766
Query: 616 MLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIAVE 675
++QAEDR HR GQT++V I+ AK T D+ W + + ++ L E +
Sbjct: 767 LIQAEDRVHRIGQTNSVGIHYLVAKGTADDYLWPLIQEKIKV-----------LGEAGLS 815
Query: 676 GVSYLEMSDKTD 687
++ EM++ TD
Sbjct: 816 ETNFSEMTEATD 827
>sp|Q8BJL0|SMAL1_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Mus musculus
GN=Smarcal1 PE=2 SV=1
Length = 910
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 174/552 (31%), Positives = 289/552 (52%), Gaps = 64/552 (11%)
Query: 197 LLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPAILRL 256
L+ ++PFQ EGV F + + GR L+AD+MGLGKT+QAI IAA + +LVV P+ +R
Sbjct: 391 LVSSLMPFQREGVSFAISKRGRLLLADDMGLGKTVQAICIAAFYRKEWPLLVVVPSSVRF 450
Query: 257 SWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQDWALL 316
+W + RWLP P +I++V + LT V ++S+ +L +L + + + + ++
Sbjct: 451 TWEQAFLRWLPSLSPENINVVVTGKG---RLTA-GLVNIVSFDLLCKLERQL-KTPFKVV 505
Query: 317 IVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLL 376
I+DESH ++ K +A + + KR++LLSGTP++SRP +++ QI + P
Sbjct: 506 IIDESHFLKNIKTA----RCRAAVPILKVAKRVILLSGTPAMSRPAELYTQIIAVKPTFF 561
Query: 377 GKAKYDFAKTYCDVKTVQ-GYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLP 435
+ + F YCD K + G+ D+S L EL +LL++ +M+RRLK +L QLP
Sbjct: 562 PQF-HAFGLRYCDAKRLPWGW------DYSGSSNLGELKLLLEEAIMLRRLKSDVLSQLP 614
Query: 436 PKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKISYQ 495
K+R+++ ++ I S A E T DKT + E A + +
Sbjct: 615 AKQRKMV--VVNPGRISSRAKAALDAAAKE--MTKDKTKQQQKE-----ALL----VFFN 661
Query: 496 ELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGI 555
AK+ E++ D+ ++ K ++FAHH +LD V + + K +
Sbjct: 662 RTAEAKIPCVVEYI------------LDL-LDSGREKFLVFAHHKVILDAVAKELERKNV 708
Query: 556 GFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSL 615
+RIDG+T DR++ FQLS +A++ ITA +GL FS+A VVF EL +P +
Sbjct: 709 QHIRIDGSTPSADREAQCQRFQLSKGHTVALLSITAANMGLTFSTADLVVFAELFWNPGV 768
Query: 616 MLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIAVE 675
++QAEDR HR GQT++V+I+ AK T D+ W + + ++ L E +
Sbjct: 769 LIQAEDRVHRIGQTNSVSIHYLVAKGTADDYLWPLIQEKIKV-----------LGEAGLS 817
Query: 676 GVSYLEMSDKTDRGSEDLTLDQVASSDQFQEL-------MKVPESSEASDFRAIN-TNDE 727
++ EM++ TD +D Q D FQ+ M+ E++E+ + + + T+
Sbjct: 818 ETNFSEMTEATDYVHKD--PKQKTIYDLFQQSFEDDGNDMEFLEAAESFELGSTSGTSGN 875
Query: 728 ITAKMNDKLLEE 739
I+ + D L E+
Sbjct: 876 ISQDLGDLLDED 887
>sp|Q8MNV7|SMAL1_CAEEL Putative SMARCAL1-like protein OS=Caenorhabditis elegans GN=C16A3.1
PE=3 SV=1
Length = 690
Score = 225 bits (573), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 152/466 (32%), Positives = 241/466 (51%), Gaps = 48/466 (10%)
Query: 196 SLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPAILR 255
SL++ + P+Q EGV F L R GR L+ADEMGLGK++QA+ IA + + +L+VCPA ++
Sbjct: 195 SLIERLFPYQKEGVIFALERDGRILLADEMGLGKSVQALTIARYYKADWPLLIVCPASVK 254
Query: 256 LSWAEELERWLPFCLPADIHLVF--GHRNNPV-HLTRFPRVVVISYTMLHRLRKSMIEQD 312
+W ++L + P IH +F ++P+ + V ++SY + + ++
Sbjct: 255 GAWKKQLNTFFPI-----IHRIFIVDKSSDPLPDVCTSNTVAIMSYEQMVLKHDILKKEK 309
Query: 313 WALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLW 372
+ +I DESH ++ K K D++ ++LLSGTP+LSRP ++F QI ++
Sbjct: 310 YRTIIFDESHMLKDGK----ARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLID 365
Query: 373 PGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLV 432
L ++FA YCD G QG+ + EEL ++ + +MIRRLK +L
Sbjct: 366 HKLFTNF-HEFAIRYCD-----GKQGRFCFEAKGCTNSEELAAIMFKRLMIRRLKADVLK 419
Query: 433 QLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKI 492
LP KRR+++ VS ++D +K A D +S E
Sbjct: 420 DLPEKRREVV--------YVSGPTIDARMDDLQK-ARADYEKVNSMERKHESLLE----- 465
Query: 493 SYQELGIAKLSGFREWL---SIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEF 549
Y GI K + E + +P D PR K++IFAHH VLD +Q
Sbjct: 466 FYSLTGIVKAAAVCEHILENYFYP-----------DAPPR--KVLIFAHHQIVLDTIQVE 512
Query: 550 ISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLEL 609
++++ +G +RIDG T R + SFQ + +++A++ ITA GVG+ ++A VVF E+
Sbjct: 513 VNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITAAGVGITLTAASVVVFAEI 572
Query: 610 PQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSL 655
+P ++QAEDRAHR GQ +V + AK T D+ W + + L
Sbjct: 573 HFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMVQQKL 618
>sp|Q9TTA5|SMAL1_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Bos taurus
GN=SMARCAL1 PE=2 SV=1
Length = 941
Score = 217 bits (553), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 168/551 (30%), Positives = 283/551 (51%), Gaps = 60/551 (10%)
Query: 184 EVVDEMIGKLPKSLLDVILPFQLEGVRFGLRRGGRCLIADEMGLGKTLQAIAIAACFISA 243
++ + + ++ L+ +LPFQ GV F + + GR L+AD+MGLGKT+QAI IAA +
Sbjct: 417 DIPEADLSRVDSKLVSSLLPFQRAGVNFAIAQRGRLLLADDMGLGKTIQAICIAAYYRKE 476
Query: 244 GSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHR 303
+LVV P+ +R +W + RWLP P DI++V ++ LT V ++S+ +L +
Sbjct: 477 WPLLVVVPSSVRFTWEQAFCRWLPSLNPLDINVVVTGKD---RLTDG-LVNIVSFDLLSK 532
Query: 304 LRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYD 363
L K + + + ++I+DESH ++ K V A + + KR++LLSGTP++SRP +
Sbjct: 533 LEKQL-KPPFKVVIIDESHFLKNIKTA-----VCAAMPLLKVAKRVILLSGTPAMSRPAE 586
Query: 364 IFHQINMLWPGLLGKAKYDFAKTYCDVK-TVQGYQGQLFQDFSKGVRLEELNVLLKQTVM 422
++ QI + P + + F YC K G+ D+S L EL +LL++ VM
Sbjct: 587 LYTQILAVRPTFFPQF-HAFGLRYCGAKRQPWGW------DYSGSSNLGELKLLLEEAVM 639
Query: 423 IRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDD 482
+RRLK +L QLP K+ + RS + + T KD +
Sbjct: 640 LRRLKGDVLSQLPAKQPRWWWSPQARS--------MPGPEPPWMPPAKEMTTKDKTKQQQ 691
Query: 483 SGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKV 542
A + + AK+ E++ D+ + R K ++FAHH V
Sbjct: 692 KEALI----LFFNRTAEAKIPSIIEYI------------LDLLESGR-EKFLVFAHHKVV 734
Query: 543 LDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQ 602
LD + + + K + +RIDG+T DR+++ SF ++ ++ ITA +GL FSSA
Sbjct: 735 LDAITKELERKRVQHIRIDGSTSSADRETSASSFSCPRALR-GVLSITAANMGLTFSSAD 793
Query: 603 NVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSAT 662
VVF EL +P +++QAEDR HR GQ S+V+I+ A+ T D+ W + + ++
Sbjct: 794 LVVFGELFWNPGVLMQAEDRVHRIGQLSSVSIHYLVARGTADDYLWPLIQEKIKV----- 848
Query: 663 NGKYDALQEIAVEGVSYLEMSDKTDRGSEDLTLDQVASSDQ--FQE---LMKVPESSEAS 717
L E + ++ EM++ TD S+D ++ + Q F+E M++ E++E+
Sbjct: 849 ------LGEAGLSETNFSEMTEATDYFSKDSKQQKIYNLFQKSFEEDGNDMELLEAAESF 902
Query: 718 DFRAINTNDEI 728
D + +T D++
Sbjct: 903 DPGSQDTGDKL 913
>sp|Q9VMX6|SMAL1_DROME SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 OS=Drosophila
melanogaster GN=Marcal1 PE=1 SV=2
Length = 755
Score = 214 bits (544), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 161/511 (31%), Positives = 240/511 (46%), Gaps = 60/511 (11%)
Query: 154 PWVTLNVVEKLSHSIDTGRWNPCRPEHLSDEVVDEMIGKLPKSLLDVILPFQLEGVRFGL 213
P+V +N + K +D P PE ++ + L D ++PFQ +GV F +
Sbjct: 209 PYVHMNGIPK--KVLDLCGQPPVVPER-------SVLASIEPKLADQLMPFQQDGVCFAI 259
Query: 214 RRGGRCLIADEMGLGKTLQAIAIAACFISAGSILVVCPAILRLSWAEELERWLPFCLPAD 273
+ GR +I DEMGLGKT QA+A+A F +LV A R SWA+ + LP
Sbjct: 260 AQKGRIMICDEMGLGKTYQALAVADYFKDDWPLLVCTTASTRDSWAKHIMDLLP---KVP 316
Query: 274 IHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEP 333
IH V NN +++ +V++ SY M+ R ++++ + +I DESH ++ SK
Sbjct: 317 IHYVQVLNNNQLYVGE-AKVLITSYNMMERHEDKLMQRKFGFIIFDESHTLKNSKAKCT- 374
Query: 334 EEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTV 393
K + D A KR+VLLSGTP+LSRP ++F Q+ M+ + +F YCD
Sbjct: 375 TTAKRLTDQA---KRVVLLSGTPALSRPLELFTQLQMIDGKFMN--FMEFTTRYCD---- 425
Query: 394 QGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVS 453
G Q D + LEEL V+L M+RR K +L QL K R+ + L
Sbjct: 426 -GKQSTFGWDANGQSNLEELKVILHLKYMLRRTKVEVLPQLAEKNRETVVL--------- 475
Query: 454 AKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFRE-WLSIH 512
D TN +T + D + +EL AK E L +
Sbjct: 476 ---------DPALVWTNAETKETLDAFN-------------KELKTAKGRATEEILLRFY 513
Query: 513 PVIAESDGAADI----DVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRD 568
AE A + K IIFAHH ++D + +F+S + ++RIDG T
Sbjct: 514 ARTAEVKTRAVCAYLKTLVKEQKKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDH 573
Query: 569 RQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQ 628
R +V +FQ + K+A++ + A G+ ++A+ +VF EL +PS + QAE RAHR GQ
Sbjct: 574 RSDSVDTFQKKSSCKVALLSLKACNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQ 633
Query: 629 TSAVNIYIFCAKDTTDESHWQNLNKSLRCVS 659
T V A +T D+ W L +S
Sbjct: 634 TKPVICRYLIAHNTADDIIWNMLKNKQEVLS 664
>sp|Q7ZU90|CHD1L_DANRE Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio
GN=chd1l PE=2 SV=1
Length = 1026
Score = 133 bits (334), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 126/515 (24%), Positives = 229/515 (44%), Gaps = 61/515 (11%)
Query: 203 PFQLEGVRF---GLRRGGRCLIADEMGLGKTLQAIAIAA----CFISAGSILVVCPAILR 255
P+QL+GV++ ++ C++ DEMGLGKT Q I++ A G LV+CP +
Sbjct: 37 PYQLDGVKWLSLCMKNQQGCILGDEMGLGKTCQTISLLAYARGSLKMNGPFLVLCPLAVL 96
Query: 256 LSWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQ 311
+W +ELER+ P C D + N RF V++ +Y M + + +
Sbjct: 97 ENWRQELERFCPSLSVICYTGDKEKRAELQQNLKSDPRF-HVLLTTYEMCLKDARYLKSW 155
Query: 312 DWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINML 371
W +L+VDE+H R + S + V +V LL+GTP + +++ + +
Sbjct: 156 KWKILVVDEAH--RLKNQESLLHQTLKEFTVGFRV----LLTGTPIQNNLQEVYSLLTFI 209
Query: 372 WPGL-LGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHL 430
P + L +A DF Y D++T + ++EL+ +L Q ++RR+K +
Sbjct: 210 QPSVFLPEAVEDFVNAYADIQT-------------EPALVDELHQVL-QPFLLRRVKAEV 255
Query: 431 LVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDE-HDDSGACCRL 489
+LP K++E+V + +K +D D D RL
Sbjct: 256 AAELP-----------KKTELVVFHGLSAL----QKRYYKAILMRDLDAFRTDQSTKTRL 300
Query: 490 GKISYQELGIAKLSGFREWLSIHPV-----IAESDGAADI------DVNPRSNKMIIFAH 538
+ Q + + P + E+ G + + + +++F+
Sbjct: 301 LNVLMQLRKCVDHPYLFDGVEPEPFEMGEHLVEASGKLSLLDSMLAYLQEGGHHVLLFSQ 360
Query: 539 HLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDF 598
++LD +Q+++ +G + R+DG+ +R A+ +F + +V I ++ AGGVG++
Sbjct: 361 MTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAIKNFS-TKDVFIFLLSTKAGGVGMNL 419
Query: 599 SSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCV 658
++A V+F++ +P LQA RAHR GQT V + +DT +E + LR
Sbjct: 420 TAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVKVIRLLGRDTIEEIIYSRAVSKLRLT 479
Query: 659 SSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDL 693
+ +L + A S L++S+ G + L
Sbjct: 480 DTVIEEGRFSLLDQAQSAASGLQLSEILKFGVDKL 514
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila
melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 127 bits (319), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 218/483 (45%), Gaps = 70/483 (14%)
Query: 203 PFQLEGV---RFGLRRGGRCLIADEMGLGKTLQAIAIAACFISA----GSILVVCPAILR 255
P+Q+EG+ R+ +G ++ADEMGLGKT+Q + G LV P
Sbjct: 732 PYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFLYSLYKEGHCRGPFLVAVPLSTL 791
Query: 256 LSWAEELERWLP--FC-----------------LPADIHLVFGHRNNPVHLTRFP-RVVV 295
++W E E W P +C L + + G + + + T++ V++
Sbjct: 792 VNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEEGAIRGSKVSRLRTTQYKFNVLL 851
Query: 296 ISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGT 355
SY ++ + DWA+L+VDE+H ++ ++ S+ + +A K +LL+GT
Sbjct: 852 TSYELISMDAACLGSIDWAVLVVDEAHRLKSNQ--SKFFRILNSYTIAYK----LLLTGT 905
Query: 356 PSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNV 415
P + ++FH +N L + K++ +Q +QG+ F D SK +++ L+
Sbjct: 906 PLQNNLEELFHLLN-----FLSRDKFN---------DLQAFQGE-FADVSKEEQVKRLHE 950
Query: 416 LLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPK 475
+L M+RRLK +L +P K I+R+ L K I +A N K+
Sbjct: 951 MLGPH-MLRRLKTDVLKNMPSKSEFIVRVELS----AMQKKFYKFILTKNYEALNSKSGG 1005
Query: 476 DS----DEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI------- 524
S + D CC + A ++ + + + A +
Sbjct: 1006 GSCSLINIMMDLKKCCNHPYL----FPSAAEEATTAAGGLYEINSLTKAAGKLVLLSKML 1061
Query: 525 -DVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVK 583
+ ++++++IF+ K+LD +++F+ + + RIDG RQ A+ F +
Sbjct: 1062 KQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAIDRFNAPGAQQ 1121
Query: 584 -IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDT 642
+ ++ AGG+G++ ++A V+ + +P +QA RAHR GQ + V IY F +++
Sbjct: 1122 FVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRNS 1181
Query: 643 TDE 645
+E
Sbjct: 1182 VEE 1184
>sp|Q7G8Y3|ISW2_ORYSJ Probable chromatin-remodeling complex ATPase chain OS=Oryza sativa
subsp. japonica GN=Os01g0367900 PE=2 SV=2
Length = 1107
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 136/566 (24%), Positives = 246/566 (43%), Gaps = 89/566 (15%)
Query: 204 FQLEGVRFGLR---RGGRCLIADEMGLGKTLQAIAIAACFIS----AGSILVVCPAILRL 256
+QL G+ + +R G ++ADEMGLGKTLQ I++ G +VV P
Sbjct: 234 YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLG 293
Query: 257 SWAEELERWLPFCLPADIHLVFGHRN----NPVHLTRFPRVVVISYTMLHRLRKSMIEQD 312
+W +E++R+ P RN N + +F V V S+ M + + ++
Sbjct: 294 NWIKEIQRFCPILRAVKFLGNPEERNHIRENLLQPGKFD-VCVTSFEMAIKEKTTLKRFS 352
Query: 313 WALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLW 372
W +I+DE+H ++ +E + + + R+ L++GTP + ++++ +N L
Sbjct: 353 WRYIIIDEAHRIK-----NENSLLSKTMRIYNTNYRL-LITGTPLQNNLHELWSLLNFLL 406
Query: 373 PGLLGKAKYDFAKTYCDVKTVQGY--QGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHL 430
P + + A+T+ + + G Q ++ Q K +R ++RRLK +
Sbjct: 407 PEI-----FSSAETFDEWFQISGENDQQEVVQQLHKVLR----------PFLLRRLKSDV 451
Query: 431 LVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLG 490
LPPK+ I+++ + + + +A + KD + + G RL
Sbjct: 452 EKGLPPKKETILKVGMSQMQKQYYRALL---------------QKDLEVINAGGERKRLL 496
Query: 491 KISYQ--------------ELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIF 536
I+ Q E G +G E L + + R ++++IF
Sbjct: 497 NIAMQLRKCCNHPYLFQGAEPGPPYTTG--EHLVENAGKMVLLDKLLPKLKDRDSRVLIF 554
Query: 537 AHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSF-QLSNEVKIAIIGITAGGVG 595
+ ++LD +++++ +G + RIDGNT DR +++ +F + +E + ++ AGG+G
Sbjct: 555 SQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLLSTRAGGLG 614
Query: 596 LDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSL 655
++ ++A VV + +P LQA+DRAHR GQ V ++ FC + T +E + K L
Sbjct: 615 INLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKL 674
Query: 656 ----------RCVSSATNGKYDALQEIAVEGVSYLEMSDKT------DR---GSEDLTLD 696
R T K D LQ + D T DR E+ T +
Sbjct: 675 ALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDIDRIIAKGEETTAE 734
Query: 697 QVASSDQFQE---LMKVPESSEASDF 719
A +F E K+ +++E DF
Sbjct: 735 LDAKMKKFTEDAIKFKMDDTAELYDF 760
>sp|Q6PGB8|SMCA1_MOUSE Probable global transcription activator SNF2L1 OS=Mus musculus
GN=Smarca1 PE=1 SV=1
Length = 1046
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 211/483 (43%), Gaps = 91/483 (18%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFISAGSI----LVVCPAILRL 256
+Q+ G+ + + G ++ADEMGLGKTLQ IA+ +I +V+ P
Sbjct: 190 YQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLH 249
Query: 257 SWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQD 312
+W E +RW+P C D + + + + V V SY M+ + + +
Sbjct: 250 NWMNEFKRWVPSLRVICFVGDKDVRAAFIRDEMMPGEWD-VCVTSYEMVIKEKSVFKKFH 308
Query: 313 WALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLW 372
W L++DE+H ++ +E ++ ++ R+ LL+GTP + ++++ +N L
Sbjct: 309 WRYLVIDEAHRIK-----NEKSKLSEIVREFKSTNRL-LLTGTPLQNNLHELWALLNFLL 362
Query: 373 PGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLV 432
P + A DF ++ D K G Q + E L+ +LK ++RR+K +
Sbjct: 363 PDVFNSAD-DF-DSWFDTKNCLGDQKLV----------ERLHAVLK-PFLLRRIKTDVEK 409
Query: 433 QLPPKRRQIIRLLLKRSE----IVSAKAAVGVINDSEK---------------------- 466
LPPK+ I L L + + + V+N S K
Sbjct: 410 SLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYL 469
Query: 467 -DATNDKTPKDSDEH--DDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAAD 523
D P +DEH +SG L K+ L+ +E
Sbjct: 470 FDGAEPGPPYTTDEHIVGNSGKMVALDKL---------LARIKE---------------- 504
Query: 524 IDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVK 583
+ ++++IF+ ++LD ++++ +G + R+DG T +R+ A+ +F N K
Sbjct: 505 -----QGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAIDAFNAPNSSK 559
Query: 584 -IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDT 642
I ++ AGG+G++ +SA V+ + +P + LQA DRAHR GQ V ++ +T
Sbjct: 560 FIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLITDNT 619
Query: 643 TDE 645
+E
Sbjct: 620 VEE 622
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 135/571 (23%), Positives = 250/571 (43%), Gaps = 114/571 (19%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFISAGSI----LVVCPAILRL 256
+Q+ G+ + + G ++ADEMGLGKTLQ I++ +I +V+ P
Sbjct: 183 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 242
Query: 257 SWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFP---RVVVISYTMLHRLRKSMI 309
+W E +RW+P CL D R V P V V SY ML + +
Sbjct: 243 NWMSEFKRWVPTLRSVCLIGDKE----QRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFK 298
Query: 310 EQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQIN 369
+ +W L++DE+H ++ +E ++ ++ R+ LL+GTP + ++++ +N
Sbjct: 299 KFNWRYLVIDEAHRIK-----NEKSKLSEIVREFKTTNRL-LLTGTPLQNNLHELWSLLN 352
Query: 370 MLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQH 429
L P + A D ++ D G Q + E L+++L+ ++RR+K
Sbjct: 353 FLLPDVFNSA--DDFDSWFDTNNCLGDQKLV----------ERLHMVLR-PFLLRRIKAD 399
Query: 430 LLVQLPPK-------------RRQIIRLLLKRSEIVSAKAAV------GVINDSEK---- 466
+ LPPK R R+L+K +I+++ + ++ K
Sbjct: 400 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNH 459
Query: 467 ----DATNDKTPKDSDEH--DDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDG 520
D P +D H +SG L K+ P + E
Sbjct: 460 PYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL-------------------PKLKE--- 497
Query: 521 AADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSN 580
+ ++++IF+ +VLD ++++ + + R+DG T +RQ +++++ N
Sbjct: 498 --------QGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPN 549
Query: 581 EVK-IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCA 639
K + ++ AGG+G++ ++A V+ + +P + LQA DRAHR GQT V ++ F
Sbjct: 550 STKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFIT 609
Query: 640 KDTTDESHWQNLNKSLRCVSSATN------------GKYDALQEIAVEGVSYLEMSDKTD 687
+T +E + LR S GK + LQ I G +++ S +++
Sbjct: 610 DNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIR-HGATHVFASKESE 668
Query: 688 RGSEDL--TLDQVA--SSDQFQELMKVPESS 714
ED+ L++ A +++ ++L K+ ESS
Sbjct: 669 ITDEDIDGILERGAKKTAEMNEKLSKMGESS 699
>sp|Q3B7N1|CHD1L_BOVIN Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus
GN=CHD1L PE=2 SV=1
Length = 897
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/530 (23%), Positives = 233/530 (43%), Gaps = 78/530 (14%)
Query: 203 PFQLEGVR-----FGLRRGGRCLIADEMGLGKTLQAIA----IAACFISAGSILVVCPAI 253
P+QL+GV F + G C++ DEMGLGKT Q IA +A G L++CP
Sbjct: 50 PYQLQGVNWLAQCFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 107
Query: 254 LRLSWAEELERWLP--------------FCLPADIHLVFGHRNNPVHLTRFPRVVVISYT 299
+ +W EE+ER+ P CL D+ +RF V++ +Y
Sbjct: 108 VLSNWKEEMERFAPGLSCVTYAGDKDKRACLQQDLK----------QESRF-HVLLTTYE 156
Query: 300 MLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLS 359
+ + + W++L+VDE+H R ++S + + V +LL+GTP +
Sbjct: 157 ICLKDASFLKSFPWSVLVVDEAH--RLKNQSSLLHKTLSEFSVVFS----LLLTGTPIQN 210
Query: 360 RPYDIFHQINMLWPGLLGKAKY-DFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLK 418
+++ ++ + P L K + DF + Y D++ +L++ L
Sbjct: 211 SLQELYSLLSFVEPDLFSKEQVEDFVQRYQDIEKESESASELYK--------------LL 256
Query: 419 QTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSD 478
Q ++RR+K + +LP K +I + + KA I + DA ++T K
Sbjct: 257 QPFLLRRVKAEVATELPRKTEVVIYHGMSALQKKYYKA----ILMKDLDAFENETAKKVK 312
Query: 479 EHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI------DVNPRSNK 532
+ + Y G+ E I + E+ G + + + ++
Sbjct: 313 LQNVLSQLRKCVDHPYLFDGVEP-----EPFEIGDHLIEASGKLHLLDKLLAFLYSKGHR 367
Query: 533 MIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAG 592
+++F+ ++LD +Q+++ +G + R+DG+ +R A+ +F + ++ AG
Sbjct: 368 VLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAIKNFG-QQPIFTFLLSTRAG 426
Query: 593 GVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLN 652
GVG++ ++A V+F + +P LQA RAHR GQ +V + +DT +E ++
Sbjct: 427 GVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAA 486
Query: 653 KSLRCVSSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDLTLDQVASSD 702
L+ ++ G + L + L++S+ G LD++ SS+
Sbjct: 487 SKLQLTNTIIEGGHFTLGAQKPAADADLQLSEILKFG-----LDKLLSSE 531
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 124 bits (311), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 124/496 (25%), Positives = 216/496 (43%), Gaps = 94/496 (18%)
Query: 203 PFQLEGV---RFGLRRGGRCLIADEMGLGKTLQAIAIAACFI----SAGSILVVCPAILR 255
P+QLEG+ RF +G ++ADEMGLGKT+Q I S G LV P
Sbjct: 702 PYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTI 761
Query: 256 LSWAEELERWLPFCLPADIHLV----------------FGHRNNPVH----LTRFPR--- 292
++W E E W P D ++V F +N + + R +
Sbjct: 762 INWEREFEMWAP-----DFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQ 816
Query: 293 ----VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKR 348
V++ SY ++ + + +WA L+VDE+H ++ ++ + VL+ + K+
Sbjct: 817 IKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQ-----SKFFRVLN-SYKIDY 870
Query: 349 IVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV 408
+LL+GTP + ++FH +N L P ++G+ + F D SK
Sbjct: 871 KLLLTGTPLQNNLEELFHLLNFLTPERF--------------NNLEGFLEE-FADISKED 915
Query: 409 RLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDA 468
++++L+ LL M+RRLK + +P K I+R+ L + + K I +A
Sbjct: 916 QIKKLHDLLGPH-MLRRLKADVFKNMPAKTELIVRVELSQMQ----KKYYKFILTRNFEA 970
Query: 469 TNDKTPKDS----DEHDDSGACCR--------------LGKISYQELGIAKLSGFREWLS 510
N K + + D CC L SY + K SG + +
Sbjct: 971 LNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSG--KLML 1028
Query: 511 IHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQ 570
+ ++ + + ++++IF+ K+LD +++F+ +G + RIDG RQ
Sbjct: 1029 LQKMLKK--------LRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ 1080
Query: 571 SAVHSFQLSNEVKIA-IIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQT 629
A+ F + ++ AGG+G++ ++A V+ + +P +QA RAHR GQ
Sbjct: 1081 EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN 1140
Query: 630 SAVNIYIFCAKDTTDE 645
V IY F + + +E
Sbjct: 1141 KKVMIYRFVTRASVEE 1156
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 123 bits (308), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 134/571 (23%), Positives = 250/571 (43%), Gaps = 114/571 (19%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFISAGSI----LVVCPAILRL 256
+Q+ G+ + + G ++ADEMGLGKTLQ I++ +I +V+ P
Sbjct: 182 YQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKSTLH 241
Query: 257 SWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFP---RVVVISYTMLHRLRKSMI 309
+W E ++W+P CL D R V P V V SY ML + +
Sbjct: 242 NWMSEFKKWVPTLRSVCLIGDKE----QRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFK 297
Query: 310 EQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQIN 369
+ +W L++DE+H ++ +E ++ ++ R+ LL+GTP + ++++ +N
Sbjct: 298 KFNWRYLVIDEAHRIK-----NEKSKLSEIVREFKTTNRL-LLTGTPLQNNLHELWSLLN 351
Query: 370 MLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQH 429
L P + A D ++ D G Q + E L+++L+ ++RR+K
Sbjct: 352 FLLPDVFNSA--DDFDSWFDTNNCLGDQKLV----------ERLHMVLR-PFLLRRIKAD 398
Query: 430 LLVQLPPK-------------RRQIIRLLLKRSEIVSAKAAV------GVINDSEK---- 466
+ LPPK R R+L+K +I+++ + ++ K
Sbjct: 399 VEKSLPPKKEVKIYVGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNH 458
Query: 467 ----DATNDKTPKDSDEH--DDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDG 520
D P +D H +SG L K+ P + E
Sbjct: 459 PYLFDGAEPGPPYTTDMHLVTNSGKMVVLDKLL-------------------PKLKE--- 496
Query: 521 AADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSN 580
+ ++++IF+ +VLD ++++ + + R+DG T +RQ +++++ N
Sbjct: 497 --------QGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPN 548
Query: 581 EVK-IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCA 639
K + ++ AGG+G++ ++A V+ + +P + LQA DRAHR GQT V ++ F
Sbjct: 549 STKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFIT 608
Query: 640 KDTTDESHWQNLNKSLRCVSSATN------------GKYDALQEIAVEGVSYLEMSDKTD 687
+T +E + LR S GK + LQ I G +++ S +++
Sbjct: 609 DNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIR-HGATHVFASKESE 667
Query: 688 RGSEDL--TLDQVA--SSDQFQELMKVPESS 714
ED+ L++ A +++ ++L K+ ESS
Sbjct: 668 ITDEDIDGILERGAKKTAEMNEKLSKMGESS 698
>sp|G5EDG2|SMRCD_CAEEL SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A containing DEAD/H box 1 homolog
OS=Caenorhabditis elegans GN=M03C11.8 PE=3 SV=1
Length = 989
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 126/541 (23%), Positives = 230/541 (42%), Gaps = 94/541 (17%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFISAGSI---LVVCPAILRLS 257
+QL GV++ + + ++ DEMGLGKT+Q +A + G L+V P+ +
Sbjct: 397 YQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLKQIGKTGPHLIVVPSSTIEN 456
Query: 258 WAEELERWLPFCLPADIHLV--FGHRNNPVHLTRFPR-------VVVISYTML-HRLRKS 307
W E +W P I L+ +G ++ HL + V++ +Y M+ +
Sbjct: 457 WIGEFHKWCP-----SIQLLTYYGSQDERKHLRHRVKKQKDHIDVILTTYNMVTSKSDDK 511
Query: 308 MIEQDWAL--LIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIF 365
++++L +I DE H ++ + E + ++ V K K +LL+GTP + ++
Sbjct: 512 KFFKNFSLNYVIYDEGHMLK----NCDSERYRGLMKVKGKKK--ILLTGTPLQNNLIELI 565
Query: 366 HQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRR 425
+ + + K D K + + + R+EE +L Q ++RR
Sbjct: 566 SLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAIL-QPYILRR 624
Query: 426 LKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGA 485
LK +L LP K QII + +K+ + V + SE+ D G+
Sbjct: 625 LKNQVLGSLPSKSEQIIEVEMKKPQKQLYDNIVEALQQSEESG------------DSYGS 672
Query: 486 CCRLGKISYQEL------------GIAKLSGFRE----------------WLS---IHPV 514
RL + + L IAK+ RE WLS IH +
Sbjct: 673 LMRLRQAANHPLLRRSEYTDQKLDKIAKMLCLREKAYADKKWQHVSEDLAWLSDIKIHQL 732
Query: 515 ---------------IAESDGAADI------DVNPRSNKMIIFAHHLKVLDGVQEFISEK 553
+A G + ++ + +K++IF+ +LD ++ +++ +
Sbjct: 733 CERFRCTSKFLLNEQLALKSGKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIR 792
Query: 554 GIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSP 613
G + R+DG T DRQ ++ F LS ++ + ++ AGG+G++ +SA +++ ++ +P
Sbjct: 793 GYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNP 852
Query: 614 SLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIA 673
QAEDR HR GQ V++ +K T + K L+ T+G L E A
Sbjct: 853 YNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALAKKKLQLEKQVTDGVKGQLDEDA 912
Query: 674 V 674
+
Sbjct: 913 L 913
>sp|Q86WJ1|CHD1L_HUMAN Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens
GN=CHD1L PE=1 SV=2
Length = 897
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 123/531 (23%), Positives = 234/531 (44%), Gaps = 73/531 (13%)
Query: 204 FQLEGV-----RFGLRRGGRCLIADEMGLGKTLQAIAI----AACFISAGSILVVCPAIL 254
+QLEGV RF + G C++ DEMGLGKT Q IA+ A G L++CP +
Sbjct: 49 YQLEGVNWLAQRFHCQNG--CILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLSV 106
Query: 255 RLSWAEELERWLP--------------FCLPADIHLVFGHRNNPVHLTRFPRVVVISYTM 300
+W EE++R+ P CL D+ +RF V++ +Y +
Sbjct: 107 LSNWKEEMQRFAPGLSCVTYAGDKEERACLQQDLK----------QESRF-HVLLTTYEI 155
Query: 301 LHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSR 360
+ + W++L+VDE+H R ++S + + V + LL+GTP +
Sbjct: 156 CLKDASFLKSFPWSVLVVDEAH--RLKNQSSLLHKTLSEFSVVFSL----LLTGTPIQNS 209
Query: 361 PYDIFHQINMLWPGLLGKAKY-DFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQ 419
+++ ++ + P L K + DF + Y D++ + EL+ LL Q
Sbjct: 210 LQELYSLLSFVEPDLFSKEEVGDFIQRYQDIE-------------KESESASELHKLL-Q 255
Query: 420 TVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDE 479
++RR+K + +LP K +I + + KA I + DA ++T K
Sbjct: 256 PFLLRRVKAEVATELPKKTEVVIYHGMSALQKKYYKA----ILMKDLDAFENETAKKVKL 311
Query: 480 HDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI------DVNPRSNKM 533
+ + Y G+ E + + E+ G + + +++
Sbjct: 312 QNILSQLRKCVDHPYLFDGVEP-----EPFEVGDHLTEASGKLHLLDKLLAFLYSGGHRV 366
Query: 534 IIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGG 593
++F+ ++LD +Q+++ +G + R+DG+ +R A+ +F + + ++ AGG
Sbjct: 367 LLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG-QQPIFVFLLSTRAGG 425
Query: 594 VGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNK 653
VG++ ++A V+F++ +P LQA RAHR GQ +V + +DT +E ++
Sbjct: 426 VGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAAS 485
Query: 654 SLRCVSSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDLTLDQVASSDQF 704
L+ + G + L + L++S+ G + L + ++ D+
Sbjct: 486 KLQLTNMIIEGGHFTLGAQKPAADADLQLSEILKFGLDKLLASEGSTMDEI 536
>sp|P32657|CHD1_YEAST Chromo domain-containing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CHD1 PE=1 SV=1
Length = 1468
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 119/488 (24%), Positives = 215/488 (44%), Gaps = 85/488 (17%)
Query: 204 FQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAACFISA----GSILVVCPAILRL 256
FQL G+ F +G ++ADEMGLGKT+Q +A + I A G ++V P
Sbjct: 379 FQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMP 438
Query: 257 SWAEELERWLP----FCLPA-----DIHLVFGHRNNP----VHLTRFPRVVVISYTMLHR 303
+W + E+W P C D + NP +F V++ +Y + +
Sbjct: 439 AWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKF-NVLLTTYEYILK 497
Query: 304 LRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYD 363
R + W + VDE+H ++ ++ +S E + + KV +L++GTP + +
Sbjct: 498 DRAELGSIKWQFMAVDEAHRLKNAE-SSLYESLNSF-----KVANRMLITGTPLQNNIKE 551
Query: 364 IFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMI 423
+ +N L PG D + Q + D + + Q ++
Sbjct: 552 LAALVNFLMPGRFT------IDQEIDFENQDEEQEEYIHDLHRRI----------QPFIL 595
Query: 424 RRLKQHLLVQLPPKRRQIIR-------------LLLKRSEIVSAKAAVG------VINDS 464
RRLK+ + LP K +I+R +L K ++A A G ++N+
Sbjct: 596 RRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNEL 655
Query: 465 EKDATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI 524
+K + + +++E Q+ G K++ RE + + +I S +
Sbjct: 656 KKASNHPYLFDNAEER------------VLQKFGDGKMT--RENV-LRGLIMSSGKMVLL 700
Query: 525 D-----VNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQL- 578
D + ++++IF+ +++LD + +++S KGI F R+DG R+ ++ F
Sbjct: 701 DQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSP 760
Query: 579 -SNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIF 637
SN+ + ++ AGG+G++ +A VV + +P LQA RAHR GQ + V +Y
Sbjct: 761 DSNDF-VFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRL 819
Query: 638 CAKDTTDE 645
+KDT +E
Sbjct: 820 VSKDTVEE 827
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 119 bits (298), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 132/516 (25%), Positives = 217/516 (42%), Gaps = 76/516 (14%)
Query: 192 KLPKSLLDVILPFQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAAC--------F 240
KLP ++ + +Q +GV F + ++ D+MGLGKTLQ I I A +
Sbjct: 1263 KLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDY 1322
Query: 241 ISAGSI-------LVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPR- 292
S+ L++CP L W E +++ PF + +V V LT P+
Sbjct: 1323 EKTRSVESRALPSLIICPPSLTGHWENEFDQYAPF-----LKVVVYAGGPTVRLTLRPQL 1377
Query: 293 ----VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKR 348
++V SY + + + ++ ++DE H ++ S+ + KAV ++ A +
Sbjct: 1378 SDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIK----NSQSKLAKAVKEITANHRL 1433
Query: 349 IVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV 408
I L+GTP + +++ + L PG LG K F + + K + + +
Sbjct: 1434 I--LTGTPIQNNVLELWSLFDFLMPGFLGTEKM-FQERFA--KPIAASRNSKTSSKEQEA 1488
Query: 409 RLEELNVLLKQTV--MIRRLKQHLLVQLPPK-----------------------RRQIIR 443
+ L L KQ + M+RRLK+ +L LPPK ++ ++
Sbjct: 1489 GVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVE 1548
Query: 444 LLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACC----RLGKISYQELGI 499
++ SEI K + + N S H + G + +
Sbjct: 1549 KDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINA 1608
Query: 500 AKLSGFREWLSIHPVIAES-DGAADIDVN-PRSN-----KMIIFAHHLKVLDGVQEFISE 552
KLS R L + E D A D N P N + +IF +LD V+ + +
Sbjct: 1609 PKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFK 1668
Query: 553 K---GIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLEL 609
K + ++R+DG+ PRDRQ V F + ++ GG+GL+ + A V+F+E
Sbjct: 1669 KYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEH 1728
Query: 610 PQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDE 645
+P LQA DRAHR GQ VN+Y K T +E
Sbjct: 1729 DWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEE 1764
>sp|Q8RWY3|ISW2_ARATH Putative chromatin-remodeling complex ATPase chain OS=Arabidopsis
thaliana GN=At3g06400 PE=2 SV=3
Length = 1055
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 137/605 (22%), Positives = 260/605 (42%), Gaps = 102/605 (16%)
Query: 204 FQLEGVRFGLR---RGGRCLIADEMGLGKTLQAIAIAACFISAGSI----LVVCPAILRL 256
+QL G+ + +R G ++ADEMGLGKTLQ I++ A I +VV P
Sbjct: 192 YQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLG 251
Query: 257 SWAEELERWLPFCLPADIHLVFGHRNNPVHLT-------RFPRVVVISYTMLHRLRKSMI 309
+W E+ R+ P G+ H+ +F + V S+ M + + ++
Sbjct: 252 NWMNEIRRFCPVLRAVKF---LGNPEERRHIREDLLVAGKFD-ICVTSFEMAIKEKTALR 307
Query: 310 EQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQIN 369
W +I+DE+H ++ +E + + + + R+ L++GTP + ++++ +N
Sbjct: 308 RFSWRYIIIDEAHRIK-----NENSLLSKTMRLFSTNYRL-LITGTPLQNNLHELWALLN 361
Query: 370 MLWPGLLGKAKYDFAKTYCDVKTVQGY--QGQLFQDFSKGVRLEELNVLLKQTVMIRRLK 427
L P + + A+T+ + + G Q ++ Q K +R ++RRLK
Sbjct: 362 FLLPEI-----FSSAETFDEWFQISGENDQQEVVQQLHKVLR----------PFLLRRLK 406
Query: 428 QHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGACC 487
+ LPPK+ I+++ + + + KA + KD + + G
Sbjct: 407 SDVEKGLPPKKETILKVGMSQMQKQYYKALL---------------QKDLEAVNAGGERK 451
Query: 488 RLGKISYQ--------------ELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKM 533
RL I+ Q E G +G + L + + R +++
Sbjct: 452 RLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG--DHLITNAGKMVLLDKLLPKLKERDSRV 509
Query: 534 IIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSF-QLSNEVKIAIIGITAG 592
+IF+ ++LD +++++ +G + RIDGNT +R +++ ++ + +E + ++ AG
Sbjct: 510 LIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAYNKPGSEKFVFLLSTRAG 569
Query: 593 GVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLN 652
G+G++ ++A V+ + +P + LQA+DRAHR GQ V ++ FC + +E +
Sbjct: 570 GLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIERAY 629
Query: 653 KSL----------RCVSSATNGKYDALQEIAVEGVSYLEMSDKT------DR---GSEDL 693
K L R T K + LQ + D T DR E+
Sbjct: 630 KKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRIIAKGEEA 689
Query: 694 TLDQVASSDQFQE---LMKVPESSEASDFRAINTNDE-------ITAKMNDKLLEESKTD 743
T + A +F E K+ +S++ DF N ++ ++ ND E K +
Sbjct: 690 TAELDAKMKKFTEDAIQFKMDDSADFYDFDDDNKDENKLDFKKIVSDNWNDPPKRERKRN 749
Query: 744 HSPTE 748
+S +E
Sbjct: 750 YSESE 754
>sp|Q24368|ISWI_DROME Chromatin-remodeling complex ATPase chain Iswi OS=Drosophila
melanogaster GN=Iswi PE=1 SV=1
Length = 1027
Score = 118 bits (296), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 207/471 (43%), Gaps = 67/471 (14%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFI----SAGSILVVCPAILRL 256
+Q+ G+ + + G ++ADEMGLGKTLQ I++ AG +V+ P
Sbjct: 131 YQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKSTLQ 190
Query: 257 SWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFP---RVVVISYTMLHRLRKSMI 309
+W E ++W P CL D RN + P V V SY M R +
Sbjct: 191 NWVNEFKKWCPSLRAVCLIGDQDT----RNTFIRDVLMPGEWDVCVTSYEMCIREKSVFK 246
Query: 310 EQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQIN 369
+ +W L++DE+H ++ K S+ E+ A ++ L++GTP + ++++ +N
Sbjct: 247 KFNWRYLVIDEAHRIKNEK--SKLSEILREFKTANRL----LITGTPLQNNLHELWALLN 300
Query: 370 MLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQH 429
L P + ++ DF + + + T G + L+ +LK ++RRLK
Sbjct: 301 FLLPDVFNSSE-DFDE-WFNTNTCLG----------DDALITRLHAVLK-PFLLRRLKAE 347
Query: 430 LLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGAC--C 487
+ +L PK+ K VG ++ ++D KD D + +G
Sbjct: 348 VEKRLKPKK--------------EMKIFVG-LSKMQRDWYTKVLLKDIDVVNGAGKVEKM 392
Query: 488 RLGKISYQELGIAKLSGFREWLSIHP-------VIAESDGAADID-----VNPRSNKMII 535
RL I Q + P ++ S A +D + + ++++I
Sbjct: 393 RLQNILMQLRKCTNHPYLFDGAEPGPPYTTDTHLVYNSGKMAILDKLLPKLQEQGSRVLI 452
Query: 536 FAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVK-IAIIGITAGGV 594
F+ ++LD ++++ + + R+DG T DR + F + N K + ++ AGG+
Sbjct: 453 FSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTRAGGL 512
Query: 595 GLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDE 645
G++ ++A V+ + +P + LQA DRAHR GQ V ++ + T +E
Sbjct: 513 GINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEE 563
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 118/491 (24%), Positives = 215/491 (43%), Gaps = 86/491 (17%)
Query: 204 FQLEGV---RFGLRRGGRCLIADEMGLGKTLQAIAIAACFI----SAGSILVVCPAILRL 256
+QLEG+ RF +G ++ADEMGLGKT+Q I + G LV P +
Sbjct: 739 YQLEGLNWLRFSWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTII 798
Query: 257 SWAEELERWLP------FCLPADIHLV-----FGHRNNPVH------------LTRFPRV 293
+W E + W P + D + F +N + +F V
Sbjct: 799 NWEREFQMWAPKFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKF-HV 857
Query: 294 VVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLS 353
++ SY ++ + ++ WA L+VDE+H ++ ++ + VL+ K+ +LL+
Sbjct: 858 LLTSYELITIDQAALGSIRWACLVVDEAHRLKNNQ-----SKFFRVLN-GYKIDHKLLLT 911
Query: 354 GTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEEL 413
GTP + ++FH +N L P ++G+ + F D SK ++++L
Sbjct: 912 GTPLQNNLEELFHLLNFLTPERF--------------NNLEGFLEE-FADISKEDQIKKL 956
Query: 414 NVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKT 473
+ LL M+RRLK + +P K I+R+ L + K I +A N +
Sbjct: 957 HDLLGPH-MLRRLKADVFKNMPAKTELIVRVELSPMQ----KKYYKYILTRNFEALNSRG 1011
Query: 474 PKDS----DEHDDSGACC--------------RLGKISYQELGIAKLSGFREWLSIHPVI 515
+ + D CC +L +Y+ + K SG + + + ++
Sbjct: 1012 GGNQVSLLNIMMDLKKCCNHPYLFPVAAMESPKLPSGAYEGGALIKSSG--KLMLLQKML 1069
Query: 516 AESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHS 575
+ + + ++++IF+ K+LD +++F+ +G + RIDG RQ A+
Sbjct: 1070 RK--------LKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDR 1121
Query: 576 FQLSNEVKIA-IIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNI 634
F + ++ AGG+G++ ++A V+ + +P +QA RAHR GQ + V I
Sbjct: 1122 FNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMI 1181
Query: 635 YIFCAKDTTDE 645
Y F + + +E
Sbjct: 1182 YRFVTRASVEE 1192
>sp|P28370|SMCA1_HUMAN Probable global transcription activator SNF2L1 OS=Homo sapiens
GN=SMARCA1 PE=1 SV=2
Length = 1054
Score = 117 bits (294), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 136/580 (23%), Positives = 242/580 (41%), Gaps = 120/580 (20%)
Query: 204 FQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAACFISAGSI----LVVCPAILRL 256
+Q+ G+ + + G ++ADEMGLGKTLQ IA+ +I +V+ P
Sbjct: 186 YQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHMVLVPKSTLH 245
Query: 257 SWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQD 312
+W E +RW+P C D + + + V V SY M+ + + +
Sbjct: 246 NWMNEFKRWVPSLRVICFVGDKDARAAFIRDEMMPGEWD-VCVTSYEMVIKEKSVFKKFH 304
Query: 313 WALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLW 372
W L++DE+H ++ +E ++ ++ R+ LL+GTP + ++++ +N L
Sbjct: 305 WRYLVIDEAHRIK-----NEKSKLSEIVREFKSTNRL-LLTGTPLQNNLHELWALLNFLL 358
Query: 373 PGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLV 432
P + A D ++ D K G Q +E L+ +LK ++RR+K +
Sbjct: 359 PDVFNSA--DDFDSWFDTKNCLGDQKL----------VERLHAVLK-PFLLRRIKTDVEK 405
Query: 433 QLPPKRRQIIRLLLKRSE----IVSAKAAVGVINDSEK---------------------- 466
LPPK+ I L L + + + V+N S K
Sbjct: 406 SLPPKKEIKIYLGLSKMQREWYTKILMKDIDVLNSSGKMDKMRLLNILMQLRKCCNHPYL 465
Query: 467 -DATNDKTPKDSDEH--DDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAAD 523
D P +DEH +SG L K+ +AKL
Sbjct: 466 FDGAEPGPPYTTDEHIVSNSGKMVVLDKL------LAKLK-------------------- 499
Query: 524 IDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQS------------ 571
+ ++++IF+ ++LD ++++ +G + R+DG T +R+
Sbjct: 500 ----EQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQRE 555
Query: 572 AVHSFQLSNEVK-IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTS 630
A+ +F N K I ++ AGG+G++ +SA V+ + +P + LQA DRAHR GQ
Sbjct: 556 AIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKK 615
Query: 631 AVNIYIFCAKDTTDESHWQNLNKSLRCVS------------SATNGKYDALQEIAVEGVS 678
V ++ +T +E + LR S S K + LQ I G +
Sbjct: 616 PVRVFRLITDNTVEERIVERAEIKLRLDSIVIQQGRLIDQQSNKLAKEEMLQMIR-HGAT 674
Query: 679 YLEMSDKTDRGSEDLTL----DQVASSDQFQELMKVPESS 714
++ S +++ ED+T + +++ + L K+ ESS
Sbjct: 675 HVFASKESELTDEDITTILERGEKKTAEMNERLQKMGESS 714
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 135/610 (22%), Positives = 253/610 (41%), Gaps = 136/610 (22%)
Query: 200 VILPFQLEGV---RFGLRRGGRCLIADEMGLGKTLQ-AIAIAACFI---SAGSILVVCPA 252
+ P+Q+EG+ RF +G ++ADEMGLGKT+Q A+ + + + S G LV P
Sbjct: 718 TLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 777
Query: 253 ILRLSWAEELERWLPFCLPADIHLV----------------FGHRNNPVH----LTRFPR 292
++W E E W P D+++V F +N + +R +
Sbjct: 778 STIINWEREFEMWAP-----DMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKK 832
Query: 293 -------VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAK 345
V++ SY ++ + DWA LIVDE+H ++ ++ + VL+
Sbjct: 833 EASVKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQ-----SKFFRVLN-GYS 886
Query: 346 VKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFS 405
++ +LL+GTP + ++FH +N L P ++G+ + F D +
Sbjct: 887 LQHKLLLTGTPLQNNLEELFHLLNFLTPERF--------------HNLEGFLEE-FADIA 931
Query: 406 KGVRLEELNVLLKQTVMIRRLKQHLL------------VQLPPKRRQIIRLLLKRS-EIV 452
K ++++L+ +L M+RRLK + V+L P +++ + +L R+ E +
Sbjct: 932 KEDQIKKLHDMLGPH-MLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEAL 990
Query: 453 SAKAA------VGVINDSEKDATNDKTPKDSDEHDDSGACC--------------RLGKI 492
+A+ + V+ D +K CC ++
Sbjct: 991 NARGGGNQVSLLNVVMDLKK-------------------CCNHPYLFPVAAMEAPKMPNG 1031
Query: 493 SYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISE 552
Y + + SG L + G ++++IF+ K+LD +++F+
Sbjct: 1032 MYDGSALIRASGKLLLLQKMLKNLKEGG----------HRVLIFSQMTKMLDLLEDFLEH 1081
Query: 553 KGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIA-IIGITAGGVGLDFSSAQNVVFLELPQ 611
+G + RIDG RQ A+ F + ++ AGG+G++ ++A V+ +
Sbjct: 1082 EGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDW 1141
Query: 612 SPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQE 671
+P +QA RAHR GQ V IY F + + +E Q K + +
Sbjct: 1142 NPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGS--- 1198
Query: 672 IAVEGVSYLEMSDKTDRGSEDLTLDQVASSDQFQELMKVPESSEASDFRAINTNDEITAK 731
+S E+ D G+E+L D+ ++ E D I+ +D+ +
Sbjct: 1199 -KTGSMSKQELDDILKFGTEELFKDEATDGGG--------DNKEGEDSSVIHYDDKAIER 1249
Query: 732 MNDKLLEESK 741
+ D+ +E++
Sbjct: 1250 LLDRNQDETE 1259
>sp|Q9S775|PKL_ARATH CHD3-type chromatin-remodeling factor PICKLE OS=Arabidopsis
thaliana GN=PKL PE=1 SV=1
Length = 1384
Score = 116 bits (291), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 124/536 (23%), Positives = 235/536 (43%), Gaps = 69/536 (12%)
Query: 194 PKSLLDVILPFQLEGV---RFGLRRGGRCLIADEMGLGKTLQAIAIAACFISAGSI--LV 248
P+ L ++ P+QLEG+ RF + ++ADEMGLGKT+Q+IA+ A I LV
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLIPHLV 325
Query: 249 VCPAILRLSWAEELERWLPFCLPADIHLVFGH-------RNNPVHLTRFPR--------- 292
+ P +W E W P ++ + FG R + +L++ +
Sbjct: 326 IAPLSTLRNWEREFATWAP---QMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQ 382
Query: 293 -------------VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAV 339
V++ SY M++ + W +IVDE H ++ ++ ++ +
Sbjct: 383 ISSESKQKRIKFDVLLTSYEMINLDSAVLKPIKWECMIVDEGHRLK-----NKDSKLFSS 437
Query: 340 LDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQ 399
L + RI LL+GTP + ++F ++ L G G +++ +Q +
Sbjct: 438 LTQYSSNHRI-LLTGTPLQNNLDELFMLMHFLDAGKFG--------------SLEEFQEE 482
Query: 400 LFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVG 459
F+D ++ ++ L+ +L ++RR+K+ ++ +PPK+ I+R+ L + KA
Sbjct: 483 -FKDINQEEQISRLHKMLAPH-LLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFT 540
Query: 460 VINDSEKDATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLS-GFREWLSIHPVIAES 518
+ ++ + CC + E I + F++ L +
Sbjct: 541 RNYQVLTKKGGAQISLNNIMMELRKVCCHPYMLEGVEPVIHDANEAFKQLLESCGKLQLL 600
Query: 519 DGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQL 578
D + + + ++++I+ +LD ++++ + K + RIDG +RQ + F
Sbjct: 601 DKMM-VKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNA 659
Query: 579 SNEVKIA-IIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIF 637
N K ++ AGG+G++ ++A V+ + +P LQA RAHR GQT+ V IY
Sbjct: 660 KNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRL 719
Query: 638 CAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDL 693
+ T +E Q L K + GK + + ++ E+ D GS++L
Sbjct: 720 INRGTIEERMMQ-LTKKKMVLEHLVVGK------LKTQNINQEELDDIIRYGSKEL 768
>sp|O43065|MOT1_SCHPO Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mot1 PE=1 SV=4
Length = 1953
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 129/537 (24%), Positives = 218/537 (40%), Gaps = 74/537 (13%)
Query: 204 FQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAAC--------FISAGS------- 245
+Q EGV F + ++ D+MGLGKTLQ I I A F +GS
Sbjct: 1361 YQQEGVNWLAFLNKYELHGILCDDMGLGKTLQTICIVASDHYNRQKLFEESGSPKFAHVP 1420
Query: 246 ILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLR 305
L+VCP+ L W +EL + PF + R + VVV SY +
Sbjct: 1421 SLIVCPSTLAGHWQQELSTYAPFLKVSAYVGPPAERAKIRSKMKKSDVVVTSYDICRNDV 1480
Query: 306 KSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIF 365
+++ DW ++DE H ++ + R + VK++ + ++LSGTP + +++
Sbjct: 1481 DELVKIDWNYCVLDEGHVIK-NARAKLTKAVKSL-----RSYHRLILSGTPIQNNVLELW 1534
Query: 366 HQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTV--MI 423
+ L PG LG K F + + V+ + + + L + KQ + M+
Sbjct: 1535 SLFDFLMPGFLGTEK-TFQERF--VRPIAASRDAKSSSKERERGTLALEAIHKQVLPFML 1591
Query: 424 RRLKQHLLVQLPPKRRQ--------IIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPK 475
RRLK+ +L LPPK Q + R LL ++ VS + D E + T K
Sbjct: 1592 RRLKEDVLADLPPKIIQDYYCDMSDLQRKLL--NDFVSQLNINEELEDDETEKTQGTRKK 1649
Query: 476 DSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPR------ 529
S + A + K+ I + + + E+ G D+ P+
Sbjct: 1650 KSQKAHIFQALQYMRKLCNHPALILTEKHPKRNAIVKQLAKENSGLHDLKHAPKLTALGQ 1709
Query: 530 --------------------------SNKMIIFAHHLKVLDGVQEFISEK---GIGFVRI 560
++++IF +LD V++ + + + ++R+
Sbjct: 1710 LLRDCGLGNSSVNSNGIDSALTNAVSEHRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRL 1769
Query: 561 DGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAE 620
DG+ P RQ AV F + + ++ GG+GL+ + A V+F+E +P LQA
Sbjct: 1770 DGSVEPTKRQEAVTKFNNDPSIDVLLLTTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAM 1829
Query: 621 DRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIAVEGV 677
DRAHR GQ VN+Y + +E + S+ N + L I + +
Sbjct: 1830 DRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQQNAGLSSIGTDQI 1886
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus
GN=Rad54b PE=2 SV=1
Length = 886
Score = 116 bits (290), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/553 (24%), Positives = 225/553 (40%), Gaps = 94/553 (16%)
Query: 172 RWNPCRPEH-----------LSDEVVDEMIGKLPKSLLDVIL---------PFQLEGVRF 211
RWN CRP H DE M + ++DV++ P Q +G+ F
Sbjct: 225 RWNDCRPRHNPCTPNALVMPRPDENHQRMFNRHCSPIVDVVIDPHLVHHLRPHQKDGIIF 284
Query: 212 ------GLRRGGRC--LIADEMGLGKTLQAIAIAACFISAG---------SILVVCPAIL 254
G+R G+C ++ADEMGLGKTLQ I++ G L+V P L
Sbjct: 285 LYECVMGMRAVGKCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLIVTPGSL 344
Query: 255 RLSWAEELERWLP------FCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSM 308
+W +E ++WL F + D H+ + F V++ISY ML R +
Sbjct: 345 VNNWRKEFQKWLGSERIKIFTVDQD------HKVEEFINSTFHSVLIISYEMLLRSLDQI 398
Query: 309 IEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAA-KVKRIVLLSGTPSLSRPYDIFHQ 367
+ LLI DE H ++ S +K +++ ++ V+L+GTP + + F
Sbjct: 399 KTIPFGLLICDEGHRLKNSS-------IKTTTALSSLSCEKTVILTGTPVQNDLQEFFAL 451
Query: 368 INMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLK 427
++ + PG+LG + K Y + + ++ G R L ++RR +
Sbjct: 452 VDFVNPGILGSLS-SYRKIYEEPIIISREPSSSKEERELGERRATELTRLTGRFILRRTQ 510
Query: 428 QHLLVQLPPK---------------------RRQIIRLLLKRSEIVSAKAAVGVINDSEK 466
+ + LPPK R Q +R L+ ++ A + I +K
Sbjct: 511 EVINKYLPPKIENVVFCRPGALQIELYRKLLRSQSVRFCLQ--GLLENSAHLICIGALKK 568
Query: 467 ---------DATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAE 517
+ K S E ++ C+ G +S G L F E S +
Sbjct: 569 LCNHPCLLFSSVKGKEFSSSCEENEERNLCQ-GLLSVFPAGYNPLQ-FSEEESGKLQVLV 626
Query: 518 SDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQ 577
A ++ P + K+I+ +++ + L+ ++E G R+DG T RQ V SF
Sbjct: 627 KLLAVIHELRP-TEKVILVSNYRQTLNVLEEVCKRHGYACARLDGQTPVSQRQHIVDSFN 685
Query: 578 LSNEVK-IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYI 636
I ++ AGGVGL+ +++ ++ +P+ +QA R R GQ V+IY
Sbjct: 686 SKYSTDFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYR 745
Query: 637 FCAKDTTDESHWQ 649
T +E +Q
Sbjct: 746 LLTTGTIEEKIYQ 758
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 135/607 (22%), Positives = 252/607 (41%), Gaps = 136/607 (22%)
Query: 203 PFQLEGV---RFGLRRGGRCLIADEMGLGKTLQ-AIAIAACFI---SAGSILVVCPAILR 255
P+Q+EG+ RF +G ++ADEMGLGKT+Q A+ + + + S G LV P
Sbjct: 728 PYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPLSTI 787
Query: 256 LSWAEELERWLPFCLPADIHLV----------------FGHRNNPVH----LTRFPR--- 292
++W E E W P D+++V F +N + +R +
Sbjct: 788 INWEREFEMWAP-----DMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEAS 842
Query: 293 ----VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKR 348
V++ SY ++ + DWA LIVDE+H ++ ++ + VL+ ++
Sbjct: 843 VKFHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQ-----SKFFRVLN-GYSLQH 896
Query: 349 IVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV 408
+LL+GTP + ++FH +N L P ++G+ + F D +K
Sbjct: 897 KLLLTGTPLQNNLEELFHLLNFLTPERF--------------HNLEGFLEE-FADIAKED 941
Query: 409 RLEELNVLLKQTVMIRRLKQHLL------------VQLPPKRRQIIRLLLKRS-EIVSAK 455
++++L+ +L M+RRLK + V+L P +++ + +L R+ E ++A+
Sbjct: 942 QIKKLHDMLGPH-MLRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYILTRNFEALNAR 1000
Query: 456 AA------VGVINDSEKDATNDKTPKDSDEHDDSGACC--------------RLGKISYQ 495
+ V+ D +K CC ++ Y
Sbjct: 1001 GGGNQVSLLNVVMDLKK-------------------CCNHPYLFPVAAMEAPKMPNGMYD 1041
Query: 496 ELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGI 555
+ + SG L + G ++++IF+ K+LD +++F+ +G
Sbjct: 1042 GSALIRASGKLLLLQKMLKNLKEGG----------HRVLIFSQMTKMLDLLEDFLEHEGY 1091
Query: 556 GFVRIDGNTLPRDRQSAVHSFQLSNEVKIA-IIGITAGGVGLDFSSAQNVVFLELPQSPS 614
+ RIDG RQ A+ F + ++ AGG+G++ ++A V+ + +P
Sbjct: 1092 KYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPH 1151
Query: 615 LMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVSSATNGKYDALQEIAV 674
+QA RAHR GQ V IY F + + +E Q K + +
Sbjct: 1152 NDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKKKMMLTHLVVRPGLGS----KT 1207
Query: 675 EGVSYLEMSDKTDRGSEDLTLDQVASSDQFQELMKVPESSEASDFRAINTNDEITAKMND 734
+S E+ D G+E+L D+ ++ E D I+ +D+ ++ D
Sbjct: 1208 GSMSKQELDDILKFGTEELFKDEATDGGG--------DNKEGEDSSVIHYDDKAIERLLD 1259
Query: 735 KLLEESK 741
+ +E++
Sbjct: 1260 RNQDETE 1266
>sp|P47264|Y018_MYCGE Uncharacterized ATP-dependent helicase MG018 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG018 PE=3
SV=3
Length = 1031
Score = 115 bits (289), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 124/507 (24%), Positives = 226/507 (44%), Gaps = 95/507 (18%)
Query: 203 PFQLEGVRF-----GLRRGGRCLIADEMGLGKTLQAI-AIAACFISAGSIL---VVCPAI 253
+Q EGV++ + GG ++ADEMGLGKT Q I A+ + S S+L ++ PA
Sbjct: 580 KYQKEGVKWIRALEDNQFGG--ILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLIIVPAS 637
Query: 254 LRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQDW 313
L L+W E +++ P + F R+ V+ + +++++S+ +L K + ++ +
Sbjct: 638 LLLNWKSEFQKFAPHVKIVTANGNFKERS-QVYESLKNQILLMSFNVLRSDIKWISQKKF 696
Query: 314 ALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVK--RIVLLSGTPSLSRPYDIFHQINML 371
+++DE+ ++ T V A K+K + L+GTP +R D++ + +
Sbjct: 697 HYVVIDEAQGIKNENST--------VTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFV 748
Query: 372 WPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQT--VMIRRLKQH 429
P LG K Q F K E L+K+T ++RR K
Sbjct: 749 LPNFLGNKK------------------QFSDQFEKEKNDESFQKLMKKTSPFILRRTKNK 790
Query: 430 LLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDS-DEHDDSGACCR 488
+L +LP ++ I + ++ SE E DK D E +S A
Sbjct: 791 VLKELP--KKIITDIYVELSE--------------EHQKLYDKQKTDGLKEIKESDAKNA 834
Query: 489 LGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSN--------------KMI 534
L +S I KL I ++ ++D D + N ++N K+I
Sbjct: 835 LNILSL----ILKLR------HICSLVKDND-VNDFEDNSKANAALNIIYEALENKRKVI 883
Query: 535 IFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGV 594
+F L V+D ++ + + I + DG ++R + + F + E + + + AGGV
Sbjct: 884 LFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGV 943
Query: 595 GLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKS 654
G++ ++A+ V+ ++ + ++ QA DRAHR GQ+ V +Y AK+T +E
Sbjct: 944 GINLTAAEVVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEER-------- 995
Query: 655 LRCVSSATNGKYDALQEIAVEGVSYLE 681
V N K + +++ VE V++ +
Sbjct: 996 ---VCQVQNQKQELVKKTLVEDVNFFK 1019
>sp|Q9CXF7|CHD1L_MOUSE Chromodomain-helicase-DNA-binding protein 1-like OS=Mus musculus
GN=Chd1l PE=2 SV=1
Length = 900
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 219/487 (44%), Gaps = 61/487 (12%)
Query: 204 FQLEGVR-----FGLRRGGRCLIADEMGLGKTLQAIAIAACFIS----AGSILVVCPAIL 254
+QLEGV F + G C++ DEMGLGKT Q IA+ + G LV+CP +
Sbjct: 43 YQLEGVNWLVQCFHCQNG--CILGDEMGLGKTCQTIALLIYLVGRLNDEGPFLVLCPLSV 100
Query: 255 RLSWAEELERWLP--FCLPADIHLVFGHRNNPVHLTRFPR------VVVISYTMLHRLRK 306
+W EE+ER+ P C+ G + L + R V++ +Y + +
Sbjct: 101 LSNWKEEMERFAPGLSCVTYT-----GDKEERARLQQDLRQESGFHVLLTTYEICLKDAS 155
Query: 307 SMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFH 366
+ W++L VDE+H ++ ++ + L + V R+ LL+GTP + +++
Sbjct: 156 FLKSFSWSVLAVDEAHRLK-----NQSSLLHRTLSEFSAVFRL-LLTGTPIQNSLRELYS 209
Query: 367 QINMLWPGLLGKAKY-DFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRR 425
+ ++ P L + + DF + Y D++ + EL+ LL Q ++RR
Sbjct: 210 LLCVVEPDLFCREQVEDFVQRYQDIE-------------KESKSASELHRLL-QPFLLRR 255
Query: 426 LKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGA 485
+K + +LP K ++ + + KA I + DA ++T K +
Sbjct: 256 VKAQVATELPKKTEVVVYHGMSALQKKYYKA----ILMKDLDAFENETAKKVKLQNILTQ 311
Query: 486 CCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI------DVNPRSNKMIIFAHH 539
+ Y G+ E + + E+ G + + +++++F+
Sbjct: 312 LRKCVDHPYLFDGVEP-----EPFEVGEHLIEASGKLHLLDRLLAFLYSGGHRVLLFSQM 366
Query: 540 LKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFS 599
+LD +Q+++ +G + R+DG+ +R A+ +F + + + ++ AGGVG++ +
Sbjct: 367 THMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFG-NQPIFVFLLSTRAGGVGMNLT 425
Query: 600 SAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLRCVS 659
+A V+F++ +P LQA RAHR GQ +V + +DT +E ++ L+ +
Sbjct: 426 AADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRKAASKLQLTN 485
Query: 660 SATNGKY 666
G +
Sbjct: 486 MVIEGGH 492
>sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=hrp1 PE=1 SV=1
Length = 1373
Score = 114 bits (285), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 125/556 (22%), Positives = 228/556 (41%), Gaps = 96/556 (17%)
Query: 201 ILPFQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAACFISA--------GSILVV 249
I FQL G+ + R ++ADEMGLGKT+Q + CF+S G L+V
Sbjct: 390 IRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTV----CFLSYLVHSLKQHGPFLIV 445
Query: 250 CPAILRLSWAEELERWLP----FCLPADIHLVFGHRNNPVHLTRFPR-----VVVISYTM 300
P +W E L W P C + R +L+ R +++ +Y
Sbjct: 446 VPLSTVPAWQETLANWTPDLNSICYTGNTESRANIREYEFYLSTNSRKLKFNILLTTYEY 505
Query: 301 LHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSR 360
+ + ++ + W L +DE+H ++ S+ S E + A + +L++GTP +
Sbjct: 506 ILKDKQELNNIRWQYLAIDEAHRLKNSE--SSLYETLSQFRTANR----LLITGTPLQNN 559
Query: 361 PYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQT 420
++ +N L PG + + + Q + +D + + Q
Sbjct: 560 LKELASLVNFLMPGKF------YIRDELNFDQPNAEQERDIRDLQERL----------QP 603
Query: 421 VMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEH 480
++RRLK+ + LP K +I+R+ L + K ++ + + T H
Sbjct: 604 FILRRLKKDVEKSLPSKSERILRVELSDMQTEWYK---NILTKNYRALTG---------H 651
Query: 481 DDSGACCRLGKISYQELGIAK----LSGFREWLSIHPVIAESDGAADIDVNPRSNKMI-- 534
D L I + ++ G E + + D I +N S KM+
Sbjct: 652 TDGRGQLSLLNIVVELKKVSNHPYLFPGAAEKWMMGRKMTREDTLRGIIMN--SGKMVLL 709
Query: 535 ---------------IFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLS 579
IF+ +++L+ + E++S +G + R+DG R+ ++ F
Sbjct: 710 DKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAP 769
Query: 580 NEVK-IAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFC 638
+ + ++ AGG+G++ ++A V+ + +P LQA RAHR GQ + VN+Y F
Sbjct: 770 DSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFL 829
Query: 639 AKDTTDESHWQNLNKSL------------RCVSSATNGKYDA--LQEIAVEGVSYLEMSD 684
+KDT +E + + + ++ N KYDA L I G S + +
Sbjct: 830 SKDTVEEDILERARRKMILEYAIISLGVTEKSKNSKNDKYDAQELSAILKFGASNMFKAT 889
Query: 685 KTDRGSEDLTLDQVAS 700
+ + E++ LD + S
Sbjct: 890 ENQKKLENMNLDDILS 905
>sp|P38144|ISW1_YEAST ISWI chromatin-remodeling complex ATPase ISW1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW1 PE=1
SV=2
Length = 1129
Score = 114 bits (284), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 117/496 (23%), Positives = 219/496 (44%), Gaps = 48/496 (9%)
Query: 183 DEVVDEMIGKLPKSLLDVILPFQLEGVRFGL---RRGGRCLIADEMGLGKTLQAIAIAAC 239
DE ++ + P + + P+Q++GV + + + ++ADEMGLGKTLQ I+
Sbjct: 178 DESIEFQFRESPAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGY 237
Query: 240 --FISA--GSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFP---- 291
+I G LV+ P +W E+ RW P + ++ G + L +
Sbjct: 238 LRYIEKIPGPFLVIAPKSTLNNWLREINRWTP---DVNAFILQGDKEERAELIQKKLLGC 294
Query: 292 --RVVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRI 349
VV+ SY ++ R + + + +W +I+DE+H ++ +E + VL R+
Sbjct: 295 DFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIK-----NEESMLSQVLREFTSRNRL 349
Query: 350 VLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVR 409
L++GTP + ++++ +N L P + A+ DF + T + D K V+
Sbjct: 350 -LITGTPLQNNLHELWALLNFLLPDIFSDAQ-DFDDWFSSESTEE--------DQDKIVK 399
Query: 410 LEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDSEKDAT 469
+L+ +L Q ++RR+K + L P ++ + L + S + K I + + DA
Sbjct: 400 --QLHTVL-QPFLLRRIKSDVETSLLP--KKELNLYVGMSSM--QKKWYKKILEKDLDAV 452
Query: 470 NDKTPKDSDEHDDSGACCRLGK-------ISYQELGIAKLSGFREWLSIHPVIAESDGAA 522
N + +L K E G + E L + +
Sbjct: 453 NGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTD--EHLVYNAAKLQVLDKL 510
Query: 523 DIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEV 582
+ ++++IF+ ++LD ++++ + + RIDG+T DR A+ + +
Sbjct: 511 LKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSK 570
Query: 583 KIAIIGIT-AGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKD 641
K + T AGG+G++ +SA VV + +P LQA DRAHR GQ V ++ +
Sbjct: 571 KFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDN 630
Query: 642 TTDESHWQNLNKSLRC 657
+ +E + + LR
Sbjct: 631 SVEEKILERATQKLRL 646
>sp|B0R0I6|CHD8_DANRE Chromodomain-helicase-DNA-binding protein 8 OS=Danio rerio GN=chd8
PE=3 SV=2
Length = 2511
Score = 113 bits (283), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 126/549 (22%), Positives = 244/549 (44%), Gaps = 82/549 (14%)
Query: 204 FQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAACFISAG---SILVVCPAILRLS 257
+QLEGV F C++ADEMGLGKT+Q+IA+ + SAG +++ P +
Sbjct: 850 YQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSIALLSEMFSAGVQSPFMIIAPLSTITN 909
Query: 258 WAEELERWLPFCLPADIHLVFGH----------------RNNPVHLT----RFPRVVVIS 297
W E W D++ + H +++ HL +F ++ +
Sbjct: 910 WEREFSNW------TDMNAIVYHGSLASRQMIQQYEMYCKDDKGHLIPGAYKF-DALITT 962
Query: 298 YTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPS 357
+ M+ + E W +++DE+H R R + + +L++ K VLL+GTP
Sbjct: 963 FEMILSDCPELREISWRCVVIDEAH--RLKNRNCKLLDSLKMLEIEHK----VLLTGTPL 1016
Query: 358 LSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLL 417
+ ++F ++ L P ++ +F + + D+KT + ++++L +L
Sbjct: 1017 QNTVEELFSLLHFLEPAQF-PSEIEFLREFGDLKTEE--------------QVQKLQSIL 1061
Query: 418 KQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVIND-----SEKDATNDK 472
K +M+RRLK+ + L PK+ II + L V K ++ S N
Sbjct: 1062 K-PMMLRRLKEDVEKNLAPKQETIIEVELTD---VQKKYYRAILERNFSFLSMGATQNSN 1117
Query: 473 TPKDSDEHDDSGACCRLGKI--SYQELGIAKLSGFREWLS----IHPVIAESDGAADID- 525
P + + CC + +E +++L + L+ + ++ + +D
Sbjct: 1118 VPNLLNTMMELRKCCNHPYLITGAEEKIVSELREVYDPLAPDFHLQALVRSAGKLVLLDK 1177
Query: 526 VNPR----SNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNE 581
+ PR +K++IF+ ++ LD +++++ K + RIDG RQ+A+ F +
Sbjct: 1178 LLPRLKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDS 1237
Query: 582 VKIAIIGIT-AGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAK 640
+ + T AGG+G++ ++A V + +P LQA+ R HR GQ+ AV +Y +
Sbjct: 1238 DRFVFLLCTRAGGLGINLTAADTCVIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR 1297
Query: 641 DTTDESHWQNLNKSL---RCVSSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDLTLDQ 697
++ + + L R V + +G +E +++ S E+ D +G+ +D+
Sbjct: 1298 NSYEREMLDKASLKLGLDRAVLQSMSGN----KESSIQQFSKKEIEDLLRKGAYAAIMDE 1353
Query: 698 VASSDQFQE 706
+F E
Sbjct: 1354 NDEGSRFCE 1362
>sp|B5DE69|CHD8_XENTR Chromodomain-helicase-DNA-binding protein 8 OS=Xenopus tropicalis
GN=chd8 PE=2 SV=2
Length = 2184
Score = 113 bits (282), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 131/551 (23%), Positives = 238/551 (43%), Gaps = 84/551 (15%)
Query: 204 FQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIAIAACFISAG---SILVVCPAILRLS 257
+QLEGV F C++ADEMGLGKT+Q+I + G LV+ P +
Sbjct: 758 YQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLQEVYNVGIRGPFLVIAPLSTITN 817
Query: 258 WAEELERWLP---------------------FCLPADIHLVFGHRNNPVHLTRFPRVVVI 296
W E W +C + L+ G +T F V+
Sbjct: 818 WEREFGSWTQMNTIVYHGSLASRQMIQQYEMYCKDSKGRLIPGAYKFDALITTFEMVL-- 875
Query: 297 SYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTP 356
+ LR E +W +I+DE+H R R + + +D+ KV LL+GTP
Sbjct: 876 --SDCPELR----EIEWRCVIIDEAH--RLKNRNCKLLDSLKHMDLEHKV----LLTGTP 923
Query: 357 SLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVL 416
+ ++F ++ L P ++ +F K + D+KT + ++++L +
Sbjct: 924 LQNTVEELFSLLHFLEPTQFS-SEAEFLKDFGDLKTEE--------------QVQKLQAI 968
Query: 417 LKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDS----EKDATNDK 472
LK +M+RRLK+ + L PK+ II + L + K ++ + K A+
Sbjct: 969 LK-PMMLRRLKEDVEKNLAPKQETIIEVELTN---IQKKYYRAILEKNFSFLTKGASQSN 1024
Query: 473 TPKDSDEHDDSGACCRLGK-ISYQELGIAKLSGFREWLSIHP-------VIAESDGAADI 524
TP + + CC I+ E I +S FRE + P ++ S I
Sbjct: 1025 TPNLLNTMMELRKCCNHPYLITGAEEKI--ISEFREATPVVPPDFHVQAMVRSSGKLVLI 1082
Query: 525 D-----VNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLS 579
D + +K++IF+ ++ LD +++++ ++ + RIDG RQ+A+ F
Sbjct: 1083 DKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAIDRFSRP 1142
Query: 580 NEVKIAIIGIT-AGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFC 638
+ + + T AGG+G++ ++A + + +P LQA+ R HR GQ+ AV IY
Sbjct: 1143 DSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKIYRLI 1202
Query: 639 AKDTTDESHWQNLNKSL---RCVSSATNGKYDALQEIAVEGVSYLEMSDKTDRGSEDLTL 695
+++ + + + L + V + +G+ + L ++ + E+ D +G+ +
Sbjct: 1203 TRNSYEREMFDKASLKLGLDKAVLQSMSGRDNHLSG-PIQQFTKKEIEDLLRKGAYAAIM 1261
Query: 696 DQVASSDQFQE 706
D+ +F E
Sbjct: 1262 DEDDEGSKFCE 1272
>sp|P41877|ISW1_CAEEL Chromatin-remodeling complex ATPase chain isw-1 OS=Caenorhabditis
elegans GN=isw-1 PE=1 SV=2
Length = 1009
Score = 112 bits (281), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 203/474 (42%), Gaps = 86/474 (18%)
Query: 220 LIADEMGLGKTLQAIAIAACFI----SAGSILVVCPAILRLSWAEELERWLPFCLPADIH 275
++ADEMGLGKTLQ I++ A LV+ P +WA E ++W P +
Sbjct: 154 ILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKSTLQNWANEFKKWCPSINAVVLI 213
Query: 276 LVFGHRNNPVHLTRFPR---VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSE 332
RN + P+ V +Y M+ +++ + + +W +I+DE+H ++ K S+
Sbjct: 214 GDEAARNQVLRDVILPQKFDVCCTTYEMMLKVKTQLKKLNWRYIIIDEAHRIKNEK--SK 271
Query: 333 PEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKT 392
E L+ ++ L++GTP + ++++ +N L P + + DF + +
Sbjct: 272 LSETVRELNSENRL----LITGTPLQNNLHELWALLNFLLPDIFTSSD-DFDSWFSN--D 324
Query: 393 VQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLPPK-------------RR 439
L Q K + Q ++RR+K + L PK R
Sbjct: 325 AMSGNTDLVQRLHKVL----------QPFLLRRIKSDVEKSLLPKKEVKVYVGLSKMQRE 374
Query: 440 QIIRLLLKRSEIVSAKAAV------GVINDSEK--------DATNDKTPKDSDEH--DDS 483
++L+K +I++ V ++ K D P +D+H D+S
Sbjct: 375 WYTKVLMKDIDIINGAGKVEKARLMNILMHLRKCVNHPYLFDGAEPGPPFTTDQHLVDNS 434
Query: 484 GACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVL 543
G L K+ L F+E + ++++IF+ ++L
Sbjct: 435 GKMVVLDKL---------LMKFKE---------------------QGSRVLIFSQFSRML 464
Query: 544 DGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVK-IAIIGITAGGVGLDFSSAQ 602
D +++F + + R+DG+T DR +A+ ++ + K I ++ AGG+G++ ++A
Sbjct: 465 DLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATAD 524
Query: 603 NVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQNLNKSLR 656
V+ + +P LQA DRAHR GQ V ++ ++T DE + LR
Sbjct: 525 VVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIEKAEAKLR 578
>sp|P75093|Y020_MYCPN Uncharacterized ATP-dependent helicase MPN_020 OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_020 PE=3
SV=1
Length = 1030
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 119/462 (25%), Positives = 208/462 (45%), Gaps = 69/462 (14%)
Query: 204 FQLEGVRF--GL---RRGGRCLIADEMGLGKTLQAI-AIAACFISAGS---ILVVCPAIL 254
+Q EGV++ GL + GG ++ADEMGLGKT+Q I A+ ++ L++ PA L
Sbjct: 581 YQQEGVKWIRGLEENKFGG--ILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASL 638
Query: 255 RLSWAEELERWLPFCLPADIHLVFGHRNNPVHLTRFPRVVVISYTMLHRLRKSMIEQDWA 314
L+W E E++ P + + + ++ ++++S+ +L K + +Q +
Sbjct: 639 LLNWKSEFEKFAP-QIKVKVANIPSKERGELYEKLTNEILIVSFNVLRSDVKLITKQRFH 697
Query: 315 LLIVDESHHVR--CSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLW 372
+++DE+ ++ S T ++VK +A L+GTP +R D++ + +
Sbjct: 698 YVVIDEAQGIKNDSSSITKAAKKVKGNFCLA--------LTGTPIENRLLDLWSCFDFVL 749
Query: 373 PGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQT--VMIRRLKQHL 430
P LG K Q F K + ++L+++T ++RR K +
Sbjct: 750 PSFLGNKK------------------QFTDQFEKEKTDQSFHLLMQRTSPFILRRTKSKV 791
Query: 431 LVQLPPKRRQIIRLLL-----KRSEIVSAKAAVGVINDSEKDATNDKTPKDSDEHDDSGA 485
L +LP K I + L K E + + +K + N T H
Sbjct: 792 LKELPNKITTDIYVELNPMHQKLYEEERDRGLEEIKQIQDKSSFNILTLILKLRH----- 846
Query: 486 CCRLGKISYQELGIAKLSGFREWL--SIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVL 543
C L K S GI + S +E IH I N R K+I+F + V+
Sbjct: 847 LCSLPKNSQ---GILENSAKKEAALEIIHEAIE----------NQR--KIILFTQFIDVI 891
Query: 544 DGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQN 603
D ++ E+GI + DG P+ R S + F + + + + AGGVG++ ++A+
Sbjct: 892 DHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEV 951
Query: 604 VVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDE 645
V+ ++ + ++ QA DRAHR GQ V +Y AK+T +E
Sbjct: 952 VIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEE 993
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 133/624 (21%), Positives = 244/624 (39%), Gaps = 121/624 (19%)
Query: 220 LIADEMGLGKTLQAIAIAACF----ISAGSILVVCPAILRLSWAEELERWLPFCLPADIH 275
+I DEMGLGKT+Q IA A + G +L+VCPA + W E + W P +H
Sbjct: 319 IIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILH 378
Query: 276 LV----------------------------FGHRN------------NPVHLTRF----- 290
+ F + + + HL +
Sbjct: 379 SMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVV 438
Query: 291 --PRVVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKR 348
+++ +Y L +++ W ++DE H +R P+ ++ K
Sbjct: 439 TDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIR------NPDSEISLTCKKLKTHN 492
Query: 349 IVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV 408
++LSGTP + +++ + ++PG LG F + + + GY G
Sbjct: 493 RIILSGTPIQNNLTELWSLFDFIFPGKLGTLPV-FQQQFVIPINIGGYANATNIQVQTGY 551
Query: 409 RLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKR---------------SEIVS 453
+ L ++RR+K + LP K+ ++ L + ++I +
Sbjct: 552 KCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQN 611
Query: 454 AKAAVGVINDSEKDATN--DKTPKDSDEHD-DSGACCRLGKISY--QELGIAKLSGFREW 508
K V D + N D +D+ H+ D G R GK+ Q L + G+
Sbjct: 612 GKRNVLFGIDILRKICNHPDLLDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWHKQGY--- 668
Query: 509 LSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKG-----IGFVRIDGN 563
K ++F ++LD ++EFIS K + ++R+DG
Sbjct: 669 -----------------------KALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGT 705
Query: 564 TLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRA 623
T + RQS V F + + ++ GG+G++ + A ++ + +PS +QA +RA
Sbjct: 706 TNIKGRQSLVDRFN-NESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERA 764
Query: 624 HRRGQTSAVNIYIFCAKDTTDES--HWQNLNKSL--RCVSSATNGKYDALQEI------- 672
R GQ V+IY + +E H Q + L R ++ ++ + E+
Sbjct: 765 WRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILTDPKQKRFFKIHELHDLFSLG 824
Query: 673 AVEGVSYLEMSDKTDRGSEDLTLDQVASSDQFQELMKVPESSEASDFRAINTNDEITAKM 732
G S E++++ + +E+L + SD F++L+ + S+ F E +
Sbjct: 825 GENGYSTEELNEEVQKHTENLKNSKSEESDDFEQLVNLSGVSKLESFYNGKEKKENSKTE 884
Query: 733 NDKLLEESKTDHSPTETDDHHNNV 756
+D+L+E S ET H++V
Sbjct: 885 DDRLIEGLLGGESNLETVMSHDSV 908
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 134/511 (26%), Positives = 224/511 (43%), Gaps = 92/511 (18%)
Query: 203 PFQLEGVRF------GLRRGGR--CLIADEMGLGKTLQAIAIAACFISAG---------S 245
P Q EG+ F G+R GR ++ADEMGLGKTLQ I++ + G
Sbjct: 305 PHQREGIVFLYECVMGMRVSGRFGAILADEMGLGKTLQCISLVWTLLRQGVYGCKPVLKR 364
Query: 246 ILVVCPAILRLSWAEELERWLP------FCLPADIHLVFGHRNNPVHLTRFPRVVVISYT 299
L+V P L +W +E ++WL F + D H V ++P++ V++ISY
Sbjct: 365 ALIVTPGSLVKNWKKEFQKWLGSERIKVFTVDQD-HKVEEFISSPLY-----SVMIISYE 418
Query: 300 MLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLS 359
ML R + ++ LLI DE H + + S + A+ +++ +R ++L+GTP +
Sbjct: 419 MLLRSLDQIQAIEFNLLICDEGHRL----KNSSIKTTTALTNLSC--ERRIILTGTPIQN 472
Query: 360 RPYDIFHQINMLWPGLLGKAKYDFAKTYCD--VKTVQGYQGQLFQDFSKGVRLEELNVLL 417
+ + I + PG+LG + K Y + V++ + + +D + R EL L
Sbjct: 473 DLQEFYALIEFVNPGVLGSLS-TYRKIYEEPIVRSREPSATKEEKDLGEK-RAAEL-TRL 529
Query: 418 KQTVMIRRLKQHLLVQLPPKRRQII-------RLLLKR---SEIVSAKAAVGVINDSEK- 466
++RR ++ + LPPK+ II +L L R S V + G + +S
Sbjct: 530 TGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSSRVISSCLQGRLENSPHL 589
Query: 467 -----------------DATNDKT--PKDSDEHDDSGACCRLGKI--------SYQELGI 499
A +K PK SDEH +S L + ++ E+
Sbjct: 590 ICIGALKKLCNHPCLLFKALKEKCCDPK-SDEHVESSLYEGLTDVFPQDYTSDTFSEIDS 648
Query: 500 AKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVLDGVQEFISEKGIGFVR 559
KL + L A I S ++++ +++ + L+ + E G + R
Sbjct: 649 GKLQVLVKLL------------AAIRELSSSERVVLVSNYTQTLNVLLETCKCYGYSYTR 696
Query: 560 IDGNTLPRDRQSAVHSFQLS-NEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQ 618
+DGNT RQ V SF + I ++ AGGVGL+ A +++ ++ +P+ +Q
Sbjct: 697 LDGNTPVSQRQQIVDSFNSKFSPAFIFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQ 756
Query: 619 AEDRAHRRGQTSAVNIYIFCAKDTTDESHWQ 649
A R R GQ V+IY T +E +Q
Sbjct: 757 AMARVWRDGQKCTVHIYRLLTTGTIEEKIYQ 787
>sp|P87114|FFT1_SCHPO ATP-dependent helicase fft1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=fft1 PE=3 SV=1
Length = 944
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 124/518 (23%), Positives = 221/518 (42%), Gaps = 66/518 (12%)
Query: 220 LIADEMGLGKTLQAIAIAACFISAG---SILVVCPAILRLSWAEELERWLPFCLPADIHL 276
++ADEMGLGKT Q I+ A G LVV P+ +W E E++ P
Sbjct: 436 ILADEMGLGKTCQVISFLASLKEKGIQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSG 495
Query: 277 VFGHRNNPVHL---TRFPRVVVISYTMLHRLRKS---MIEQDWALLIVDESHHVRCSKRT 330
R N + T F V+V +Y + R + +Q + + I DE H+++ R
Sbjct: 496 TQSERINKRYYLMDTDFD-VLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLK--NRM 552
Query: 331 SEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDV 390
SE K ++++ A + +L++GTP + ++ + + P + Y +
Sbjct: 553 SE--RYKHLMNIPANFR--LLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIY-KI 607
Query: 391 KTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLPPK------------- 437
KT G + + + R+ ++ ++RR K+++L LPPK
Sbjct: 608 KTTS--DGDIERAYLSQERISRAKTIM-NPFILRRRKENVLSDLPPKIQHVEYCHMEETQ 664
Query: 438 -------------------------RRQIIRLLLKRSEIVSAKAAVGVINDSEKDATNDK 472
R+ + LL RS+ ++ +DA D
Sbjct: 665 LSLYLSVLELKNLVNANRENILMQLRKAALHQLLFRSQYNLETLSLMSKRILREDAYLDA 724
Query: 473 TPKDSDEHDDSGACCRLGKIS--YQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRS 530
P+ E + + L K++ Y+ L L G + W+ A+ + R
Sbjct: 725 NPQYIFEDMEVMSDFELHKLADQYRHLHPFALKG-KPWMDS----AKVKKLCSLLKKSRP 779
Query: 531 N-KMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGI 589
N +++IF+ +VLD ++ ++ + F+R+DG+T RQ + F + K+ ++
Sbjct: 780 NERILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLST 839
Query: 590 TAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDESHWQ 649
+GG G++ + A V+ + +P +QAEDRAHR GQT V++Y K+T +E+ +
Sbjct: 840 KSGGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRR 899
Query: 650 NLNKSLRCVSSATNGKYDALQEIAVEGVSYLEMSDKTD 687
N L SS T +EI+ E + L+M + D
Sbjct: 900 LANTKLTLESSLTTDSEKIQKEISGELMKSLQMDGRVD 937
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila
yakuba GN=okr PE=3 SV=2
Length = 784
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 123/505 (24%), Positives = 214/505 (42%), Gaps = 72/505 (14%)
Query: 197 LLDVILPFQLEGVRFGL-----RRGG--RCLIADEMGLGKTLQAIAIAACFISAG----- 244
L +++ P Q EGVRF +RG C++ADEMGLGKTLQ + + + G
Sbjct: 152 LSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKP 211
Query: 245 ---SILVVCPAILRLSWAEELERWLP---FCLPADIHLVFGHRNNPVH-LTRFPR----- 292
+VV P+ L +W +E +WL CLP + G + N + L +F
Sbjct: 212 TINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPME----GGTKENTIRALEQFSMTSSRL 267
Query: 293 ---VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRI 349
V++ISY + + + + ++I DE H ++ S + +A++ + K KR
Sbjct: 268 GTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLT----YQALMGL--KTKRR 321
Query: 350 VLLSGTPSLSRPYDIFHQINMLWPGLLGKA---KYDFAKTYCDVKTVQGYQGQLFQDFSK 406
VLLSGTP + + + +N + P +LG A K +F + +G+ + K
Sbjct: 322 VLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEGERQRAIEK 381
Query: 407 GVRLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQII--RLLLKRSEIVSAKAAVGVINDS 464
+EL L+ Q + IRR Q L LP K +I +L + E+ + + S
Sbjct: 382 T---QELIGLVDQCI-IRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFLKSDQVRRS 437
Query: 465 EKDATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI 524
D + + C + Y+++ A+ GF ++ P +
Sbjct: 438 LADCNEKASLTALADITTLKKICSHPDLIYEKI-TAREKGFENSQNVLPSNYNTK----- 491
Query: 525 DVNPR-------------------SNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTL 565
D+NP ++K+++ +++ + LD ++ ++ GFVR+DG
Sbjct: 492 DLNPELSGKFMLLDFMLAAIRADGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS 551
Query: 566 PRDRQSAVHSFQ-LSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAH 624
+ R V F ++ + ++ AGG GL+ A + + +P+ QA R
Sbjct: 552 IKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVW 611
Query: 625 RRGQTSAVNIYIFCAKDTTDESHWQ 649
R GQ IY A + +E Q
Sbjct: 612 RDGQKKPCYIYRMVASGSIEEKILQ 636
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1
SV=1
Length = 1493
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 210/522 (40%), Gaps = 98/522 (18%)
Query: 182 SDEVVDEMIGKLPKSLLDVILPFQLEGVRF-----GLRRGGRCLIADEMGLGKTLQAIAI 236
SD DE K+P L + +Q GVR+ + GG ++ DEMGLGKT+Q IA
Sbjct: 489 SDAEFDEGF-KVPGFLFKKLFKYQQTGVRWLWELHCQQAGG--ILGDEMGLGKTIQIIAF 545
Query: 237 AAC--------------FISAGSILVVCPAILRLSWAEELERWLPFCLPADIHLVFGHRN 282
A F G ++VCP + W +E W P A +H + +
Sbjct: 546 LAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWPPFRVAILHETGSYTH 605
Query: 283 NPVHLTR----FPRVVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKA 338
L R +++ SY+ + ++ + DW +I+DE H +R A
Sbjct: 606 KKEKLIRDVAHCHGILITSYSYIRLMQDDISRYDWHYVILDEGHKIR---------NPNA 656
Query: 339 VLDVAAKVKRI---VLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQG 395
+ +A K R ++LSG+P + +++ + ++PG LG F + + T+ G
Sbjct: 657 AVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPV-FMEQFSVPITMGG 715
Query: 396 YQGQLFQDFSKGVRLEELNVLLKQTV---MIRRLKQ--HLLVQLPPKRRQII-------- 442
Y + +L+ T+ ++RR+K + + LP K Q++
Sbjct: 716 YSNASPVQVKTAYKCA---CVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLFCRLTDEQ 772
Query: 443 --------------RLLLKRSEIVSAKAAVGVI-NDSEKDATNDKT----PKDSDEHDDS 483
R+L +I S A+ I N + + K P D E D
Sbjct: 773 HKVYQNFVDSKEVYRILNGEMQIFSGLIALRKICNHPDLFSGGPKNLKGLPDDELEEDQF 832
Query: 484 GACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDVNPRSNKMIIFAHHLKVL 543
G R GK+ I S + W + + ++++F+ ++L
Sbjct: 833 GYWKRSGKM------IVVESLLKIW------------------HKQGQRVLLFSQSRQML 868
Query: 544 DGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAIIGITAGGVGLDFSSAQN 603
D ++ F+ + ++++DG T RQ + + + + ++ GG+G++ + A
Sbjct: 869 DILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRVGGLGVNLTGANR 928
Query: 604 VVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDTTDE 645
VV + +PS QA +RA R GQ V +Y T +E
Sbjct: 929 VVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEE 970
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 110 bits (274), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 123/501 (24%), Positives = 218/501 (43%), Gaps = 62/501 (12%)
Query: 197 LLDVILPFQLEGVRFGL-----RRGG--RCLIADEMGLGKTLQAIAI--------AACFI 241
L +++ P Q EGVRF +RG C++ADEMGLGKTLQ +A+ A C
Sbjct: 148 LSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVALVWTLLKQSAECKP 207
Query: 242 SAGSILVVCPAILRLSWAEELERWL---PFCLPADIHLVFGHRNNPVH-LTRFPR----- 292
+ ++V P+ L +W +E +WL CL + G + N V L +F
Sbjct: 208 TINKCIIVSPSSLVKNWEKEFTKWLHGRMHCLAME----GGSKENTVRALEQFSMNASTR 263
Query: 293 ----VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKR 348
V++ISY + + + + ++I DE H ++ S + +A++ + K KR
Sbjct: 264 LGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLT----YQALMGL--KTKR 317
Query: 349 IVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV 408
VLLSGTP + + F +N + P +LG A DF + + + ++G Q D +
Sbjct: 318 RVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAA-DFKRNFENC-ILRG-QNADSTDKERDR 374
Query: 409 RLEELNVLLK--QTVMIRRLKQHLLVQLPPKRRQII--RLLLKRSEIVSAKAAVGVINDS 464
LE+ L+K +IRR Q L LP K +I +L + ++ + + S
Sbjct: 375 ALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLYTNFLKSDQVRRS 434
Query: 465 EKDATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADI 524
D + + C + +++ A+ GF +I P+ G +
Sbjct: 435 LADCKEKASLTALADITTLKKLCSHPNLICEKIA-AEEKGFENSQNILPINYNPKGEINP 493
Query: 525 DVNPR---------------SNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDR 569
+++ + ++K+++ +++ + LD ++ ++ GFVR+DG + R
Sbjct: 494 ELSGKFKLLDFMLAAIRAHGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKR 553
Query: 570 QSAVHSFQ-LSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQ 628
V F ++ + ++ AGG GL+ A + + +P+ QA R R GQ
Sbjct: 554 SKVVDRFNDPESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQ 613
Query: 629 TSAVNIYIFCAKDTTDESHWQ 649
IY A + +E Q
Sbjct: 614 KKPCYIYRLVASGSIEEKILQ 634
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 122/503 (24%), Positives = 212/503 (42%), Gaps = 68/503 (13%)
Query: 197 LLDVILPFQLEGVRFGL-----RRGG--RCLIADEMGLGKTLQAIAIAACFISAG----- 244
L +++ P Q EGVRF +RG C++ADEMGLGKTLQ + + + G
Sbjct: 152 LSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKP 211
Query: 245 ---SILVVCPAILRLSWAEELERWLP---FCLPADIHLVFGHRNNPVH-LTRFPR----- 292
+VV P+ L +W +E +WL CLP + G + N + L +F
Sbjct: 212 TINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPME----GGTKENTIRALEQFSMTSARL 267
Query: 293 ---VVVISYTMLHRLRKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRI 349
V++ISY + + + + ++I DE H ++ S + +A++ + K KR
Sbjct: 268 GTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLT----YQALMGL--KTKRR 321
Query: 350 VLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGV- 408
VLLSGTP + + + +N + P +LG A F + + Q+ + +
Sbjct: 322 VLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAV-FKRNFESAILRGQNTDSTEQERQRAIE 380
Query: 409 RLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQII--RLLLKRSEIVSAKAAVGVINDSEK 466
+ +EL L+ Q + IRR Q L LP K +I +L + E+ + + S
Sbjct: 381 KTQELIGLVDQCI-IRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLA 439
Query: 467 DATNDKTPKDSDEHDDSGACCRLGKISYQELGIAKLSGFREWLSIHPVIAESDGAADIDV 526
D + + C + Y++L A+ GF ++ P D+
Sbjct: 440 DCNEKASLTALADITTLKKICSHPDLIYEKL-TAREKGFENSQNVLP-----SNYKPKDL 493
Query: 527 NPR-------------------SNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPR 567
NP ++K+++ +++ + LD ++ ++ GFVR+DG +
Sbjct: 494 NPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIK 553
Query: 568 DRQSAVHSFQ-LSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRR 626
R V F ++ + ++ AGG GL+ A + + +P+ QA R R
Sbjct: 554 KRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRD 613
Query: 627 GQTSAVNIYIFCAKDTTDESHWQ 649
GQ IY A + +E Q
Sbjct: 614 GQKKPCYIYRLVASGSIEEKILQ 636
>sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6 OS=Homo sapiens GN=CHD6
PE=1 SV=4
Length = 2715
Score = 109 bits (273), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 131/552 (23%), Positives = 244/552 (44%), Gaps = 90/552 (16%)
Query: 204 FQLEGVR---FGLRRGGRCLIADEMGLGKTLQAIA-IAACFISA--GSILVVCPAILRLS 257
+QLEG+ F C++ADEMGLGKT+Q+I ++ F+ G L++ P +
Sbjct: 464 YQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLRGIHGPFLIIAPLSTITN 523
Query: 258 WAEELERWLPFC------------LPADIHLVF-GHRNNPVHLTRFPRVVVISYTMLHRL 304
W E W + +V+ + NP+ VV+ ++ M+
Sbjct: 524 WEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDAQGNPLSGVFKFHVVITTFEMILAD 583
Query: 305 RKSMIEQDWALLIVDESHHVRCSKRTSEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDI 364
+ + W+ +I+DE+H R R + E ++ + K VLL+GTP + ++
Sbjct: 584 CPELKKIHWSCVIIDEAH--RLKNRNCKLLEGLKLMALEHK----VLLTGTPLQNSVEEL 637
Query: 365 FHQINMLWPGLLGKAKYDFAKTYCDVKTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIR 424
F +N L P ++ F + + D+KT + ++++L +LK +M+R
Sbjct: 638 FSLLNFLEPSQF-PSETAFLEEFGDLKTEE--------------QVKKLQSILK-PMMLR 681
Query: 425 RLKQHLLVQLPPKRRQIIRLLLKRSEIVSAKAAVGVINDS----EKDATNDKTPKDSDEH 480
RLK + L PK+ II + L + K ++ + K A P +
Sbjct: 682 RLKDDVEKNLAPKQETIIEVELTN---IQKKYYRAILEKNFSFLTKGANQHNMPNLINTM 738
Query: 481 DDSGACCRLGK-ISYQELGIAKLSGFREWLS-------IHPVIAESDGAADID-VNPR-- 529
+ CC I+ E I L FR+ S + +I + ID + P+
Sbjct: 739 MELRKCCNHPYLINGAEEKI--LEDFRKTHSPDAPDFQLQAMIQAAGKLVLIDKLLPKLI 796
Query: 530 --SNKMIIFAHHLKVLDGVQEFISEKGIGFVRIDGNTLPRDRQSAVHSFQLSNEVKIAII 587
+K++IF+ ++ LD +++++ ++ + RIDG RQ+A+ F + + +
Sbjct: 797 AGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFL 856
Query: 588 GIT-AGGVGLDFSSAQNVVFLELPQSPSLMLQAEDRAHRRGQTSAVNIYIFCAKDT---- 642
T AGG+G++ ++A + + +P LQA+ R HR GQ+ AV +Y +++
Sbjct: 857 LCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYERE 916
Query: 643 ----------TDESHWQNLNKSLRCVSSATNGKYDALQEIAVEGV----SYLEMSDKTDR 688
D++ Q++N+ TNG L ++ VE + +Y + D+ D
Sbjct: 917 MFDKASLKLGLDKAVLQDINR-----KGGTNG-VQQLSKMEVEDLLRKGAYGALMDEEDE 970
Query: 689 GSE--DLTLDQV 698
GS+ + +DQ+
Sbjct: 971 GSKFCEEDIDQI 982
>sp|Q8K1P7|SMCA4_RAT Transcription activator BRG1 OS=Rattus norvegicus GN=Smarca4 PE=1
SV=1
Length = 1613
Score = 108 bits (271), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 206/451 (45%), Gaps = 39/451 (8%)
Query: 220 LIADEMGLGKTLQAIAIAACFIS----AGSILVVCPAILRLSWAEELERWLPFCLPADIH 275
++ADEMGLGKT+Q IA+ + G L++ P +WA E ++W P +
Sbjct: 776 ILADEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYK 835
Query: 276 LVFGHRNNPVHLTRFPR--VVVISYTMLHRLRKSMIEQDWALLIVDESHHVR---CSKRT 330
R V R + V++ +Y + + + + + W +IVDE H ++ C
Sbjct: 836 GSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHC---- 891
Query: 331 SEPEEVKAVLDVAAKVKRIVLLSGTPSLSRPYDIFHQINMLWPGLLGKAKYDFAKTYCDV 390
++ VL+ R +LL+GTP ++ +++ +N L P + K+ F + +
Sbjct: 892 ----KLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIF-KSCSTFEQWFNAP 946
Query: 391 KTVQGYQGQLFQDFSKGVRLEELNVLLKQTVMIRRLKQHLLVQLPPKRRQIIRLLLKRSE 450
+ G + L ++ + + + L+ +L+ ++RRLK+ + QLP K +I+ + +
Sbjct: 947 FAMTGEKVDLNEEETILI-IRRLHKVLR-PFLLRRLKKEVEAQLPEKVEYVIKCDMSALQ 1004
Query: 451 IVSAK--AAVGVINDSEKDATNDKTPKDSDEHDDSGACCRLGKI-------SYQELGIAK 501
V + A GV+ D + +L KI + E ++
Sbjct: 1005 RVLYRHMQAKGVLLT---DGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSE 1061
Query: 502 LSGFREWLSIHPVIAESDGAADI------DVNPRSNKMIIFAHHLKVLDGVQEFISEKGI 555
GF + + + G ++ + ++K+++F ++ ++++ + +G
Sbjct: 1062 HLGFTGGIVQGLDLYRASGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGF 1121
Query: 556 GFVRIDGNTLPRDRQSAVHSF-QLSNEVKIAIIGITAGGVGLDFSSAQNVVFLELPQSPS 614
++R+DG T DR + +F + +E I ++ AGG+GL+ SA V+ + +P
Sbjct: 1122 KYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPH 1181
Query: 615 LMLQAEDRAHRRGQTSAVNIYIFCAKDTTDE 645
LQA+DRAHR GQ + V + C ++ +E
Sbjct: 1182 QDLQAQDRAHRIGQQNEVRVLRLCTVNSVEE 1212
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 378,759,212
Number of Sequences: 539616
Number of extensions: 16725581
Number of successful extensions: 42111
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 256
Number of HSP's successfully gapped in prelim test: 258
Number of HSP's that attempted gapping in prelim test: 40556
Number of HSP's gapped (non-prelim): 1166
length of query: 997
length of database: 191,569,459
effective HSP length: 127
effective length of query: 870
effective length of database: 123,038,227
effective search space: 107043257490
effective search space used: 107043257490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)