Citrus Sinensis ID: 001915

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------
MLVLVGTMPSLASLVSLGSISVTGTTSCCSESSCCSLVKRVSLTKRNFKGKKRWVCKYSVTTQTTTTTTDFIEQGNGSAVSFDSNTFRGRNSDNDSDGDDNGIVLKPAPRPVLKSLGVKGGASVSGVNSMGWDPSRVGEDSDEEERNKVIESLDEVLEKAEKLETRNESGNVSVNKATLPNVSADTKNGRPMNSVGAKKSKTLKSVWKKGDSVASIQKVVKETPKTKVKKEEPKMGGDMKMESQLNIPPRPVQPPLRPQPKLQTKPSVASTPVIKKPVVLKDVGAGQKLSTIGEADSAVKNKERKPILIDKFASKKPAVDPLISQAVLAPTKPGKGPAGKFKDDYRKKGGPRKRIVDDDDEIPDEEASELIPGAARKGRKWTKASRKAAKLKAAKDAAPVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKKDLFDEEDLDKLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKIIGLNGVPIAGDEFEVVDSLDVAREKAEARAFSLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDLEEGDIIEAFNSIQRKRTLEEASASMASALEGAGIEL
cEEEEccccccccccccccccccccccccccccccccEEEEEcccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccHHHHHHHHHHHHHccccccEEEEEEEccccccHHHHHHHHcccHHHHHHHHHHccccccccccccHHHHHHHHHHcccEEEEEcccHHHHHHHHcccccccccccccccccEEEEccccccccccHHHHHHHcccccccccccccccccEEEEEccccccccEEEccccccHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHcccccccccccccEEEccccccccHHHHHHHHHHHHHHHHcccccccccCEEEEEEccccccccEEEEEEEccccccccEEEEcccccEEEccccccccccEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccEEEcEEEEccccccHHHHHHHHHccccccEEEEEEEcccccccHHHHHHHHHcccEEEEEcccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEEEcccccCEEEEEEEEEEEEEEcccEEEEEccEEEEEccccccccccHHHHHHccccccccccccccccccccEEEEEEEEEEEHHHHHHHHHHHHHHHHccccc
MLVL**TMPSLASL*SL****************CCSLVKRVSLTKRNFKGKKRWVCKYSV*************************************************************************************************************************************************************************************************************************************************************************************************************************************************APVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKK**********LEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKIIGLNGVPIAGDEFEVVDSLDVAREKAE***********************SLASAVSAGKLSGLDLHQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDLEEGDIIEAFNSIQRKR****************GI**
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
SSSSSSSSSSSSSSSSSSxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLVLVGTMPSLASLVSLGSISVTGTTSCCSESSCCSLVKRVSLTKRNFKGKKRWVCKYSVTTQTTTTTTDFIEQGNGSAVSFDSNTFRGRNSDNDSDGDDNGIVLKPAPRPVLKSLGVKGGASVSGVNSMGWDPSRVGEDSDEEExxxxxxxxxxxxxxxxxxxxxNESGNVSVNKATLPNVSADTKNGRPMNSVGAKKSKTLKSVWKKGDSVASIQKVVKETPKTKVKKEEPKMGGDMKMESQLNIPPRPVQPPLRPQPKLQTKPSVASTPVIKKPVVLKDVGAGQKLSTIGEADSAVKNKERKPILIDKFASKKPAVDPLISQAVLAPTKPGKGPAGKFKDDYRKKGGPRKRIVDDDDEIPDEEASELIPGAARKGRKWTKASRKAAKLKAAKDAAPVKVEILEVGEKGMLIEELARNLAIGEGEILGSLYSKGIKPEGVQTLDKDMVKMICKDYEVEVLDADPVKMEEMARKKDLFDEEDLDKLEDRPPVLTIMGHVDHGKTTLLDHIRKTKVAAAEAGGITQGIGAYKVQVPVDGKLQPCVFLDTPGHEAFGAMRARGARVTDIAVIVVAADDGIRPQTNEAIAHAKAAGVPIVIAINKIDKDGANPERVMQELSSIGLMPEDWGGDIPMVQISALKGEKVDDLLETIMLVAELQELKANPHRNAKGTVIEAGLHKSKGPVATFILQNGTLKKGDVVVCGEAFGKIIGLNGVPIAGDEFEVVDSLDVAREKAEARAFSLRNERISAKAGDGKVTLSSLASAVSAGKLSGLDLHQLNVIMKVDVQGSIEAVRQALQVLPQDNVTLKFLLQATGDISASDVDLAVASKAIILGFNVKAPGSVKTYADNKGVEIRLYRVIYDLIDDMRNAMEGLLETVEEQVPIGSAEVRAIFSSGSGRVAGCMVSEGKLVKGCGIRVIRDGKTVHVGVLDSLRRVKENVKEVNAGLECGVGAADYDDLEEGDIIEAFNSIQRKRTLEEASASMASALEGAGIEL

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Translation initiation factor IF-2, chloroplastic One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.probableQ9SHI1
Translation initiation factor IF-2, chloroplastic One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex.probableP57997

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3IZY, chain P
Confidence level:very confident
Coverage over the Query: 489-970
View the alignment between query and template
View the model in PyMOL
Template: 2YWE, chain A
Confidence level:very confident
Coverage over the Query: 490-734,750-812,827-991
View the alignment between query and template
View the model in PyMOL
Template: 3O47, chain A
Confidence level:confident
Coverage over the Query: 411-655
View the alignment between query and template
View the model in PyMOL