Your job contains 1 sequence.
>001916
MAEMANNAPYSGAQVPHQPPMVGSMDPPRGQGGLIMNAGFPSQPLQPPFRPLMHPLPARP
GPPAPSHVPPPPQVMSLPNAQPSNHIPPSSLPRPNVQALSSYPPGLGGLGRPVAASYTFA
PSSYGQPQLIGNVNIGSQQPMSQMHVPSISAGGQLGVSVSQSTVSSTPVQPTDEQMAATT
ASAPLPTLQPKSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTD
WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPS
SVVKAPSSADISSSTVEVIVSSPVAVVPIIAASETQPALVSVPSTSPVITSSVVANADGF
PKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDA
VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY
GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT
MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN
TQWRKVQDRLEADERCSRLDKMDRLEIFQEYLNDLEKEEEEQRKIQKEELSKTERKNRDE
FRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQF
QEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIKVKEKE
EKEAKKRKRLEDEFFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFV
TQLKEQAKDYERKRKEEKAKREKEREERDRRKLKQGRDKERAREREKEDHSKKDGADSDH
DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPES
ENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001916
(996 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2091171 - symbol:PRP40B "pre-mRNA-processing p... 1681 4.9e-181 3
TAIR|locus:2194894 - symbol:PRP40A "pre-mRNA-processing p... 1339 5.4e-158 2
RGD|1311401 - symbol:Prpf40a "PRP40 pre-mRNA processing f... 763 1.0e-75 1
UNIPROTKB|O75400 - symbol:PRPF40A "Pre-mRNA-processing fa... 751 1.9e-74 1
MGI|MGI:1860512 - symbol:Prpf40a "PRP40 pre-mRNA processi... 751 1.9e-74 1
UNIPROTKB|F1RQH2 - symbol:PRPF40A "Uncharacterized protei... 750 2.5e-74 1
UNIPROTKB|G3MZC7 - symbol:PRPF40A "Uncharacterized protei... 749 3.1e-74 1
DICTYBASE|DDB_G0283543 - symbol:prp40 "FF domain-containi... 521 1.9e-68 3
ZFIN|ZDB-GENE-030131-274 - symbol:prpf40a "PRP40 pre-mRNA... 525 6.3e-68 3
ASPGD|ASPL0000052549 - symbol:AN1249 species:162425 "Emer... 434 7.6e-63 3
FB|FBgn0031492 - symbol:CG3542 species:7227 "Drosophila m... 423 4.1e-56 4
UNIPROTKB|Q6NWY9 - symbol:PRPF40B "Pre-mRNA-processing fa... 457 5.4e-56 3
UNIPROTKB|F1NQH4 - symbol:PRPF40A "Uncharacterized protei... 593 1.2e-55 2
MGI|MGI:1925583 - symbol:Prpf40b "PRP40 pre-mRNA processi... 458 2.2e-55 3
WB|WBGene00014218 - symbol:ZK1098.1b species:6239 "Caenor... 375 1.3e-50 3
POMBASE|SPAC4D7.13 - symbol:usp104 "U1 snRNP-associated p... 375 6.2e-50 2
UNIPROTKB|F5H578 - symbol:PRPF40A "Pre-mRNA-processing fa... 365 1.5e-32 1
UNIPROTKB|F1NT10 - symbol:TCERG1 "Uncharacterized protein... 253 1.1e-27 5
MGI|MGI:1926421 - symbol:Tcerg1 "transcription elongation... 238 1.3e-27 5
UNIPROTKB|O14776 - symbol:TCERG1 "Transcription elongatio... 239 2.6e-27 5
WB|WBGene00022855 - symbol:tcer-1 species:6239 "Caenorhab... 265 4.1e-25 4
SGD|S000001495 - symbol:PRP40 "U1 snRNP protein involved ... 171 3.4e-23 3
UNIPROTKB|F1RM10 - symbol:TCERG1 "Uncharacterized protein... 239 3.6e-23 4
UNIPROTKB|F1MKU9 - symbol:TCERG1 "Uncharacterized protein... 239 4.4e-23 4
RGD|1311748 - symbol:Tcerg1 "transcription elongation reg... 238 4.9e-23 4
FB|FBgn0261641 - symbol:CG42724 species:7227 "Drosophila ... 205 6.6e-20 3
UNIPROTKB|H0YG38 - symbol:PRPF40A "Pre-mRNA-processing fa... 235 4.5e-18 2
CGD|CAL0003333 - symbol:orf19.3250 species:5476 "Candida ... 207 4.4e-13 1
WB|WBGene00022853 - symbol:ZK1127.6 species:6239 "Caenorh... 184 7.1e-11 2
MGI|MGI:109568 - symbol:Wbp4 "WW domain binding protein 4... 152 1.3e-09 2
MGI|MGI:1917821 - symbol:Tcerg1l "transcription elongatio... 170 2.1e-09 2
FB|FBgn0037255 - symbol:Fip1 species:7227 "Drosophila mel... 123 3.4e-09 2
UNIPROTKB|F1PCW3 - symbol:WBP4 "Uncharacterized protein" ... 147 4.6e-09 2
RGD|620033 - symbol:Wbp4 "WW domain binding protein 4" sp... 155 5.5e-08 2
UNIPROTKB|G4MWS5 - symbol:MGG_08329 "DNA replication prot... 107 5.7e-08 4
UNIPROTKB|Q17QQ6 - symbol:WBP4 "Uncharacterized protein" ... 148 6.3e-08 2
UNIPROTKB|B7Z4M2 - symbol:WBP4 "cDNA FLJ52917, highly sim... 138 5.2e-07 2
UNIPROTKB|O75554 - symbol:WBP4 "WW domain-binding protein... 138 6.5e-07 2
ZFIN|ZDB-GENE-050522-342 - symbol:zgc:112384 "zgc:112384"... 146 1.7e-06 2
UNIPROTKB|B4DJ96 - symbol:LUC7L3 "Luc7-like protein 3" sp... 97 1.7e-06 2
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 118 2.3e-06 2
UNIPROTKB|O95232 - symbol:LUC7L3 "Luc7-like protein 3" sp... 97 3.1e-06 2
UNIPROTKB|Q5R8W6 - symbol:LUC7L3 "Luc7-like protein 3" sp... 97 3.1e-06 2
UNIPROTKB|E1C6U8 - symbol:LUC7L3 "Uncharacterized protein... 96 3.1e-06 2
UNIPROTKB|H0YA81 - symbol:LUC7L3 "Luc7-like protein 3" sp... 93 4.1e-06 2
UNIPROTKB|Q5F457 - symbol:WBP4 "WW domain-binding protein... 135 4.5e-06 2
UNIPROTKB|F1RTB6 - symbol:LUC7L3 "Uncharacterized protein... 94 5.1e-06 2
UNIPROTKB|F1NXG2 - symbol:WBP4 "WW domain-binding protein... 134 5.8e-06 2
WB|WBGene00016360 - symbol:C33G8.2 species:6239 "Caenorha... 108 6.3e-06 2
ZFIN|ZDB-GENE-040426-2822 - symbol:ppig "peptidyl-prolyl ... 95 9.5e-06 3
FB|FBgn0031273 - symbol:CG2839 species:7227 "Drosophila m... 107 1.1e-05 2
UNIPROTKB|J9NVS6 - symbol:CYLC2 "Uncharacterized protein"... 106 1.5e-05 2
SGD|S000006356 - symbol:URN1 "Putative protein of unknown... 118 1.9e-05 2
DICTYBASE|DDB_G0289719 - symbol:DDB_G0289719 "SFRS2-inter... 106 2.0e-05 3
UNIPROTKB|E1C9K0 - symbol:CTR9 "Uncharacterized protein" ... 97 2.1e-05 2
GENEDB_PFALCIPARUM|PF10_0135 - symbol:PF10_0135 "hypothet... 109 2.5e-05 2
UNIPROTKB|Q8IJQ7 - symbol:PF10_0135 "Conserved Plasmodium... 109 2.5e-05 2
MGI|MGI:1914934 - symbol:Luc7l3 "LUC7-like 3 (S. cerevisi... 93 2.7e-05 2
UNIPROTKB|Q3SX41 - symbol:LUC7L3 "Luc7-like protein 3" sp... 93 2.7e-05 2
MGI|MGI:1914171 - symbol:Prpf38b "PRP38 pre-mRNA processi... 108 4.1e-05 2
UNIPROTKB|J9NRQ6 - symbol:CYLC2 "Uncharacterized protein"... 102 4.4e-05 2
GENEDB_PFALCIPARUM|PF11_0486 - symbol:PF11_0486 "MAEBL, p... 133 4.5e-05 2
UNIPROTKB|Q8IHP3 - symbol:PF11_0486 "MAEBL, putative" spe... 133 4.5e-05 2
UNIPROTKB|Q86X95 - symbol:CIR1 "Corepressor interacting w... 96 7.3e-05 2
RGD|1311097 - symbol:Ctr9 "Ctr9, Paf1/RNA polymerase II c... 93 7.7e-05 2
RGD|735202 - symbol:Arhgap27 "Rho GTPase activating prote... 133 7.8e-05 1
UNIPROTKB|Q6TLK4 - symbol:Arhgap27 "Rho GTPase-activating... 133 7.8e-05 1
UNIPROTKB|E2RSR5 - symbol:EIF3A "Uncharacterized protein"... 100 8.2e-05 3
DICTYBASE|DDB_G0271832 - symbol:DDB_G0271832 "Zinc finger... 103 8.3e-05 2
UNIPROTKB|F1S4P6 - symbol:EIF3A "Uncharacterized protein"... 98 8.9e-05 3
TAIR|locus:2012843 - symbol:AT1G10320 species:3702 "Arabi... 99 9.8e-05 3
UNIPROTKB|F1S6V3 - symbol:CTR9 "Uncharacterized protein" ... 94 0.00011 2
UNIPROTKB|A6QPU2 - symbol:ARHGAP12 "ARHGAP12 protein" spe... 132 0.00011 2
UNIPROTKB|F1N5D0 - symbol:ZRSR2 "Uncharacterized protein"... 92 0.00011 2
MGI|MGI:95301 - symbol:Eif3a "eukaryotic translation init... 102 0.00012 3
UNIPROTKB|E1B7R4 - symbol:EIF3A "Uncharacterized protein"... 97 0.00014 3
DICTYBASE|DDB_G0291063 - symbol:thoc2 "putative THO2 prot... 104 0.00016 3
UNIPROTKB|C9JVK6 - symbol:WAC "WW domain-containing adapt... 115 0.00016 1
MGI|MGI:1916903 - symbol:Arhgap27 "Rho GTPase activating ... 130 0.00016 1
ZFIN|ZDB-GENE-050309-102 - symbol:itsn2b "intersectin 2b"... 123 0.00019 3
UNIPROTKB|E2QUP1 - symbol:NSRP1 "Uncharacterized protein"... 101 0.00019 2
UNIPROTKB|Q5ZI03 - symbol:CIR1 "Corepressor interacting w... 98 0.00020 2
UNIPROTKB|G4NEH6 - symbol:MGG_00102 "Cell cycle control p... 128 0.00022 1
DICTYBASE|DDB_G0292242 - symbol:taf1 "transcription initi... 122 0.00028 3
UNIPROTKB|E2R749 - symbol:SREK1 "Uncharacterized protein"... 114 0.00029 3
UNIPROTKB|J9JHP7 - symbol:LOC100855889 "Uncharacterized p... 94 0.00029 2
UNIPROTKB|F1PR59 - symbol:ARHGAP12 "Uncharacterized prote... 134 0.00035 2
UNIPROTKB|Q6PD62 - symbol:CTR9 "RNA polymerase-associated... 91 0.00037 2
UNIPROTKB|E1BSS3 - symbol:EIF3A "Uncharacterized protein"... 113 0.00037 3
UNIPROTKB|F1MMZ9 - symbol:CCAR1 "Uncharacterized protein"... 97 0.00038 2
DICTYBASE|DDB_G0293562 - symbol:DDB_G0293562 species:4468... 105 0.00041 2
ZFIN|ZDB-GENE-040801-225 - symbol:prpf38a "PRP38 pre-mRNA... 108 0.00042 2
UNIPROTKB|C9JD58 - symbol:WAC "WW domain-containing adapt... 115 0.00046 1
DICTYBASE|DDB_G0284459 - symbol:DDB_G0284459 species:4468... 99 0.00046 3
UNIPROTKB|F1LRG1 - symbol:Eif3a "Eukaryotic translation i... 99 0.00050 3
RGD|1307269 - symbol:Eif3a "eukaryotic translation initia... 99 0.00051 3
UNIPROTKB|B7Z6T0 - symbol:ARHGAP27 "Rho GTPase-activating... 121 0.00051 1
UNIPROTKB|E1C077 - symbol:CALD1 "Caldesmon" species:9031 ... 124 0.00051 2
UNIPROTKB|G3V897 - symbol:Ctr9 "SH2 domain binding protei... 93 0.00057 2
MGI|MGI:109345 - symbol:Ctr9 "Ctr9, Paf1/RNA polymerase I... 92 0.00058 2
WARNING: Descriptions of 24 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2091171 [details] [associations]
symbol:PRP40B "pre-mRNA-processing protein 40B"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0008380 "RNA splicing" evidence=IPI]
[GO:0070063 "RNA polymerase binding" evidence=IPI]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006355 GO:GO:0008380 GO:GO:0006351 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AP000417 Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 IPI:IPI00525827
IPI:IPI01020219 PIR:T52396 RefSeq:NP_188601.4 UniGene:At.27544
HSSP:O75400 ProteinModelPortal:F4JCC1 SMR:F4JCC1 PRIDE:F4JCC1
EnsemblPlants:AT3G19670.1 GeneID:821504 KEGG:ath:AT3G19670
TAIR:At3g19670 KO:K12821 OMA:SHERPSQ InterPro:IPR027237
PANTHER:PTHR11864:SF0 Uniprot:F4JCC1
Length = 992
Score = 1681 (596.8 bits), Expect = 4.9e-181, Sum P(3) = 4.9e-181
Identities = 367/817 (44%), Positives = 490/817 (59%)
Query: 189 QPKSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPD 248
+P ++ TDW EHTSADGR+Y+FNKRT+ STW+KP ELMT ERADA TDWKE +SPD
Sbjct: 198 KPLPSQKALTDWVEHTSADGRKYFFNKRTKKSTWEKPVELMTLFERADARTDWKEHSSPD 257
Query: 249 GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPN-SQTSISFPSSVVKAPS 307
GRKYYYNK+TKQS W++P+E+K+ REQAE AS++G +E + S+ ++ AP+
Sbjct: 258 GRKYYYNKITKQSTWTMPEEMKIVREQAEIASVQGPHAEGIIDASEVLTRSDTASTAAPT 317
Query: 308 SADIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFPKTVDAI 367
QPA N D + D
Sbjct: 318 GLP------SQTSTSEGVEKLTLTSDLKQPA-------SVPGSSSPVENVDRVQMSADET 364
Query: 368 APMIDVSSSIGEAV--TDNTVAEA--KNNLS--NMSASDLVGA--SDKVPPPVTEETRKD 419
+ + D S + G +V T+ + A K+ +S N SD + +++ +E++K
Sbjct: 365 SQLCDTSETDGLSVPVTETSAATLVEKDEISVGNSGDSDDMSTKNANQGSGSGPKESQKP 424
Query: 420 AVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
V EKV EEK + QE F++ NKLEA + FK+LL+SA VGSDWTW+QA+R IIND+R
Sbjct: 425 MVESEKVESQTEEKQIHQESFSFNNKLEAVDVFKSLLKSAKVGSDWTWEQAMREIINDKR 484
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAV 539
YGALRTLGERK AFNE+L Q K+ EER + KK +D+K+MLEE VELT STRWSK V
Sbjct: 485 YGALRTLGERKQAFNEFLLQTKRAAEEERLARQKKLYEDFKRMLEECVELTPSTRWSKTV 544
Query: 540 TMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKA 599
TMFE+DERFKALERE+DR+++F+DH+ ELK+K R KA E+RKRNIIEY++FLESC+FIK
Sbjct: 545 TMFEDDERFKALEREKDRRNIFEDHVSELKEKGRVKALEDRKRNIIEYKRFLESCNFIKP 604
Query: 600 NTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRD 659
N+QWRKVQDRLE DERCSRL+K+D+LEIF K ERK+RD
Sbjct: 605 NSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLRDLEREEEEKKKIQKEELKKVERKHRD 664
Query: 660 EFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQ 719
EF L++ +A G LTAKT WRDY +KVKD P Y A+ASN+SG+TPKDLFED VE+L+K+
Sbjct: 665 EFHGLLDEHIATGELTAKTIWRDYLMKVKDLPVYSAIASNSSGATPKDLFEDAVEDLKKR 724
Query: 720 FQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXX 779
E K++IKD +KLRK+ LS+ TF++FK S+ ED P I DV LKL+FDDLL
Sbjct: 725 DHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISEDIGFPLIPDVRLKLVFDDLLERAKEK 784
Query: 780 XXXXXXXXXXXXXXFFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEF 839
D+L S K+I+A+S+WE + L+EGS++ S+IGDES + F+++
Sbjct: 785 EEKEARKQTRQTEKLVDMLRSFKDITASSSWEELKHLVEGSEKCSTIGDESFRKRCFEDY 844
Query: 840 VTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXHSKKDGADSD 899
V+ LKEQ+ G H KK A
Sbjct: 845 VSLLKEQSN----RIKQNKKVPEDVREEHDKGRDKYGREKDRVRERDSDDHHKKGAAGKY 900
Query: 900 HDDSAE---NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLAS 956
+ D E + +RSG+D+ +HR+RH S + EN+ D K H+ KK R
Sbjct: 901 NHDMNEPHGKERRRSGRDSHNRHRERHTS----VKENDTDHFKESHKAGGGHKKSRHQRG 956
Query: 957 -TPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYG 992
E+E E + KR R++ +R++ E+LEDGE G
Sbjct: 957 WVSEAEVEGKEKRRRKEE---AREHTKEEELEDGECG 990
Score = 65 (27.9 bits), Expect = 4.9e-181, Sum P(3) = 4.9e-181
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 4 MANNAPYSGAQVPHQPPMVGSMDPPRG 30
MANN Y G Q P Q P S+D PRG
Sbjct: 1 MANNHQYPGIQ-PFQHPNASSIDLPRG 26
Score = 49 (22.3 bits), Expect = 4.9e-181, Sum P(3) = 4.9e-181
Identities = 28/128 (21%), Positives = 47/128 (36%)
Query: 30 GQGGLIMNAGFPSQPLQPPFRXXXXXXXXXXXXXXXXXXXXXXXXXXLPNAQPSNHIPP- 88
G+GG +++ G+P Q P +QP+ I
Sbjct: 59 GRGGTVLSIGYPPQSYAPQLLQSMHHSHERPSQLNQVQVQHVPLGPPTLISQPNVSIASG 118
Query: 89 SSLPRPNVQA----LSSYXXXXXXXXRPVAASYTFAPSSYGQPQLIG-NVNIGSQQPMSQ 143
+SL +P VQ + + P A SY S PQ+ G +++ +QQ S
Sbjct: 119 TSLHQPYVQTPDIGMPGFGGPRALFSYPSATSYE---GSRVPPQVTGPSIHSQAQQRASI 175
Query: 144 MHVPSISA 151
+H + S+
Sbjct: 176 IHTSAESS 183
>TAIR|locus:2194894 [details] [associations]
symbol:PRP40A "pre-mRNA-processing protein 40A"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016592 "mediator complex" evidence=IDA] [GO:0008380 "RNA
splicing" evidence=IPI] [GO:0070063 "RNA polymerase binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005829
GO:GO:0006355 GO:GO:0008380 GO:GO:0006351 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AC007915 GO:GO:0016592 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
EMBL:AC020576 KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0
EMBL:AK316856 IPI:IPI00526992 IPI:IPI00548835 IPI:IPI00892236
IPI:IPI00900521 RefSeq:NP_001117438.1 RefSeq:NP_175113.2
UniGene:At.14888 UniGene:At.28268 HSSP:Q61051
ProteinModelPortal:B6EUA9 SMR:B6EUA9 PRIDE:B6EUA9
EnsemblPlants:AT1G44910.1 GeneID:841057 KEGG:ath:AT1G44910
TAIR:At1g44910 eggNOG:COG5104 OMA:WEKPLEL PhylomeDB:B6EUA9
ProtClustDB:CLSN2681520 Genevestigator:B6EUA9 Uniprot:B6EUA9
Length = 958
Score = 1339 (476.4 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 289/630 (45%), Positives = 393/630 (62%)
Query: 237 ASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASI--KGTQSETSP---N 291
+++DW+E TS DGRKYYYNK TKQS W P EL E+A+ +++ + T E N
Sbjct: 186 SASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADASTVWKEFTTPEGKKYYYN 245
Query: 292 SQTSIS---FPSSVVKAPSSADIXXXXXXXXXXXXX-----XXXXXXXXXXTQPALXXXX 343
T S P + A A + T ++
Sbjct: 246 KVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPLSHHAASSSDLAVSTVTSVVPST 305
Query: 344 XXXXXXXXXXXANAD-GFPKT-VDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDL 401
A P T ++AP+ S +I + T+ T + +NLS+ A D
Sbjct: 306 SSALTGHSSSPIQAGLAVPVTRPPSVAPVTPTSGAISD--TEATTIKG-DNLSSRGADD- 361
Query: 402 VGASDKVPPPVTEETRKD-AVRGE-KVSDALEEKTVEQEHFAYANKLEAKNAFKALLESA 459
++D E K+ +V G+ +S A ++ VE E YA K EAK AFK+LLES
Sbjct: 362 --SNDGATAQNNEAENKEMSVNGKANLSPAGDKANVE-EPMVYATKQEAKAAFKSLLESV 418
Query: 460 NVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDY 519
NV SDWTW+Q L+ I++D+RYGALRTLGERK AFNEYLGQ+KK +AEERR + KKAR+++
Sbjct: 419 NVHSDWTWEQTLKEIVHDKRYGALRTLGERKQAFNEYLGQRKKVEAEERRRRQKKAREEF 478
Query: 520 KKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEE 579
KMLEE EL+SS +WSKA+++FEND+RFKA++R RDR+D+FD+++ EL++KER KA EE
Sbjct: 479 VKMLEECEELSSSLKWSKAMSLFENDQRFKAVDRPRDREDLFDNYIVELERKEREKAAEE 538
Query: 580 RKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXXX 639
++ + +YRKFLE+CD+IKA TQWRK+QDRLE D+RCS L+K+DRL F
Sbjct: 539 HRQYMADYRKFLETCDYIKAGTQWRKIQDRLEDDDRCSCLEKIDRLIGFEEYILDLEKEE 598
Query: 640 XXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASN 699
+ ERKNRD FR L+E VA G LTAKT W DYCI++KD P Y AVASN
Sbjct: 599 EELKRVEKEHVRRAERKNRDAFRTLLEEHVAAGILTAKTYWLDYCIELKDLPQYQAVASN 658
Query: 700 TSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPP 759
TSGSTPKDLFEDV EEL+KQ+ EDK+ +KDA+K RKI++ S+W FEDFK+++ ED ++
Sbjct: 659 TSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFEDFKSAISEDLSTQQ 718
Query: 760 ISDVNLKLIFDDLLIXXXXXXXXXXXXXXXXXXXFFDLLCSVKEISATSTWENCRQLLEG 819
ISD+NLKLI+DDL+ F +LL + KEI+ S WE+ +QL+E
Sbjct: 719 ISDINLKLIYDDLVGRVKEKEEKEARKLQRLAEEFTNLLHTFKEITVASNWEDSKQLVEE 778
Query: 820 SQEFSSIGDESICRGVFDEFVTQLKEQAKD 849
SQE+ SIGDES+ +G+F+E++T L+E+AK+
Sbjct: 779 SQEYRSIGDESVSQGLFEEYITSLQEKAKE 808
Score = 433 (157.5 bits), Expect = 2.2e-66, Sum P(3) = 2.2e-66
Identities = 99/230 (43%), Positives = 132/230 (57%)
Query: 89 SSLPRPNVQALSSYXXXXXXXXRPVAASYTFAPSSYGQPQLIGNVNIGSQQPMSQMHVPS 148
S+ P+PN ++ + P ++ YTF PSSY Q Q V QP SQMHV
Sbjct: 92 STQPQPNAPPMTGFATSGP----PFSSPYTFVPSSYPQQQPTSLV-----QPNSQMHVAG 142
Query: 149 ISAGGQLGXXXXXXXXXXXXXXXXDEQMXXXXXXXXXXXXQPKSAEGVQTDWKEHTSADG 208
+ Q P+SA +DW+EHTSADG
Sbjct: 143 VPPAANTWPVPVNQSTSLVSPVQQTGQQTPVAVSTDPGNLTPQSA----SDWQEHTSADG 198
Query: 209 RRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDE 268
R+YY+NKRT+ S W+KP ELMT +ERADAST WKEFT+P+G+KYYYNKVTK+SKW++P++
Sbjct: 199 RKYYYNKRTKQSNWEKPLELMTPLERADASTVWKEFTTPEGKKYYYNKVTKESKWTIPED 258
Query: 269 LKLAREQAEKASIKGTQSE--TSP-------NSQTSISFPSSVVKAPSSA 309
LKLAREQA+ AS K + SE ++P +S ++S +SVV + SSA
Sbjct: 259 LKLAREQAQLASEKTSLSEAGSTPLSHHAASSSDLAVSTVTSVVPSTSSA 308
Score = 222 (83.2 bits), Expect = 5.4e-158, Sum P(2) = 5.4e-158
Identities = 50/109 (45%), Positives = 74/109 (67%)
Query: 891 SKKDGADSDHD-DSAEN--DSKRSGKDNDKKHRKRHQSAHD---SLDENEKDRSKNPHR- 943
SK++ +D + D +E D KR GKD D+KHR+RH + D S D +++D SK R
Sbjct: 853 SKREESDGETAMDVSEGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKKSSRK 912
Query: 944 HNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYG 992
H +DRKK R+ A++PESE+E+RHKR ++++ SR++G+ E LEDGE G
Sbjct: 913 HGNDRKKSRKHANSPESESENRHKRQKKES---SRRSGNDE-LEDGEVG 957
Score = 147 (56.8 bits), Expect = 2.2e-66, Sum P(3) = 2.2e-66
Identities = 38/167 (22%), Positives = 85/167 (50%)
Query: 423 GEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
G D E+ T E E + +K K+A K+ ++ S W ++ AI D
Sbjct: 661 GSTPKDLFEDVTEELEKQYHEDKSYVKDAMKS--RKISMVSSWLFEDFKSAISEDLSTQQ 718
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + K +++ +G+ K+++ +E R KL++ +++ +L E+T ++ W + +
Sbjct: 719 ISDIN-LKLIYDDLVGRVKEKEEKEAR-KLQRLAEEFTNLLHTFKEITVASNWEDSKQLV 776
Query: 543 ENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRK 589
E + ++++ E + +F++++ L++K + K ERKR+ + RK
Sbjct: 777 EESQEYRSIGDESVSQGLFEEYITSLQEKAKEK---ERKRDEEKVRK 820
Score = 84 (34.6 bits), Expect = 2.1e-143, Sum P(2) = 2.1e-143
Identities = 25/91 (27%), Positives = 44/91 (48%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN-- 962
E D K KD DK+ R++ + E K+RSK R SD + ++ + E
Sbjct: 823 ERDEKEKRKDKDKERREKEREREK---EKGKERSK---REESDGETAMDVSEGHKDEKRK 876
Query: 963 -ESRHKRHRRDNRNGSRKN--GDHEDLEDGE 990
+ R ++HRR + N S ++ D +D ++ +
Sbjct: 877 GKDRDRKHRRRHHNNSDEDVSSDRDDRDESK 907
Score = 83 (34.3 bits), Expect = 2.6e-143, Sum P(2) = 2.6e-143
Identities = 23/91 (25%), Positives = 42/91 (46%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
K+ D + + K GK+ K+ ++A D + E KD + + DRK
Sbjct: 829 KRKDKDKERREKEREREKEKGKERSKREESDGETAMD-VSEGHKDEKRKGK--DRDRKHR 885
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGD 982
RR + + E+ S + R +++ SRK+G+
Sbjct: 886 RRHHNNSD-EDVSSDRDDRDESKKSSRKHGN 915
Score = 82 (33.9 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 23/77 (29%), Positives = 39/77 (50%)
Query: 659 DEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQK 718
+EF L+ +T +NW D V++S Y ++ S + LFE+ + LQ+
Sbjct: 751 EEFTNLLHT---FKEITVASNWEDSKQLVEESQEYRSIGDE---SVSQGLFEEYITSLQE 804
Query: 719 QFQEDKTRIKDAVKLRK 735
+ +E K R +D K+RK
Sbjct: 805 KAKE-KERKRDEEKVRK 820
Score = 82 (33.9 bits), Expect = 1.4e-59, Sum P(3) = 1.4e-59
Identities = 46/198 (23%), Positives = 92/198 (46%)
Query: 398 ASDLVGASDK-VPPPVTEETRKDAVRGEK-VSDALEEKTVEQ-EHFAYANKLEAKNAFKA 454
AS+ G++ K + VTEE K + V DA++ + + + + + FK+
Sbjct: 656 ASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKDAMKSRKISMVSSWLFED-------FKS 708
Query: 455 LLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEE-RRLKLK 513
+ S ++ + D L+ I +D G ++ E++ + L ++ + + +
Sbjct: 709 AI-SEDLSTQQISDINLKLIYDDL-VGRVKEKEEKEARKLQRLAEEFTNLLHTFKEITVA 766
Query: 514 KARDDYKKMLEESVELTSSTRWSKAVTMFEN-----DERFKALERERD----RKDMFDDH 564
+D K+++EES E S S + +FE E+ K ER+RD RK+ D
Sbjct: 767 SNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDE 826
Query: 565 LDELKQKERAKAQEERKR 582
++ K K++ + ++ER+R
Sbjct: 827 KEKRKDKDKERREKERER 844
Score = 80 (33.2 bits), Expect = 5.1e-44, Sum P(3) = 5.1e-44
Identities = 47/215 (21%), Positives = 91/215 (42%)
Query: 372 DVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALE 431
D S+I E ++ +++ NL + DLVG +V +E RK E+ ++ L
Sbjct: 705 DFKSAISEDLSTQQISDI--NLK-LIYDDLVG---RVKEKEEKEARKLQRLAEEFTNLLH 758
Query: 432 EKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKT 491
T ++ A +N ++K + E ++G + I + A ERK
Sbjct: 759 --TFKEITVA-SNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEK--ERKR 813
Query: 492 AFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFE-----NDE 546
+ +K++ + E+R+ K K+ R+ ++ +E + S S T + DE
Sbjct: 814 DEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETAMDVSEGHKDE 873
Query: 547 RFKALERERDRKDMFDDHLDELKQKERAKAQEERK 581
+ K +R+R + ++ DE +R E +K
Sbjct: 874 KRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKK 908
Score = 75 (31.5 bits), Expect = 1.8e-142, Sum P(2) = 1.8e-142
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 890 HSKKD-GADSDHDDSAENDSKRSGKD--NDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS 946
H+ D SD DD ++SK+S + ND+K ++H ++ +S EN R K S
Sbjct: 889 HNNSDEDVSSDRDD--RDESKKSSRKHGNDRKKSRKHANSPESESENRHKRQKKESSRRS 946
Score = 67 (28.6 bits), Expect = 1.3e-141, Sum P(2) = 1.3e-141
Identities = 15/96 (15%), Positives = 41/96 (42%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
S G ++ S + +K + D++ ++ + + +KD+ + +++K
Sbjct: 789 SVSQGLFEEYITSLQEKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEK 848
Query: 951 PRRLASTPESENESR---HKRHRRDNRNGSRKNGDH 983
+ + ES+ E+ + H+ + R G ++ H
Sbjct: 849 GKERSKREESDGETAMDVSEGHKDEKRKGKDRDRKH 884
Score = 61 (26.5 bits), Expect = 5.6e-141, Sum P(2) = 5.6e-141
Identities = 12/69 (17%), Positives = 30/69 (43%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNG 976
+K +++ + + EK+R + R + D+++ + + + + R KR D
Sbjct: 804 EKAKEKERKRDEEKVRKEKERDEKEKRKDKDKERREKEREREKEKGKERSKREESDGETA 863
Query: 977 SRKNGDHED 985
+ H+D
Sbjct: 864 MDVSEGHKD 872
Score = 47 (21.6 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
Identities = 20/93 (21%), Positives = 36/93 (38%)
Query: 907 DSKRSGKDNDKKHRKRHQSAHDSLDENE----KDRSKNPHRHNSDRKKPRRLASTPESEN 962
DSK+ +++ + +S L E ++++K R D +K R+ E E
Sbjct: 771 DSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKEKERKR-DEEKVRKEKERDEKEK 829
Query: 963 ESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+ RR+ K E + E GE+
Sbjct: 830 RKDKDKERREKEREREKEKGKERSKREESDGET 862
Score = 45 (20.9 bits), Expect = 1.0e-55, Sum P(3) = 1.0e-55
Identities = 27/114 (23%), Positives = 52/114 (45%)
Query: 509 RLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKAL-ERERDRKDMFDDHLDE 567
R+K K+ ++ +K+ + E T+ K +T+ N E K L E ++ + + D+ + +
Sbjct: 734 RVKEKEEKEA-RKLQRLAEEFTNLLHTFKEITVASNWEDSKQLVEESQEYRSIGDESVSQ 792
Query: 568 LKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDK 621
+E + +E+ + + RK E KV+ E DE+ R DK
Sbjct: 793 GLFEEYITSLQEKAKE--KERKRDEE-----------KVRKEKERDEKEKRKDK 833
Score = 41 (19.5 bits), Expect = 1.4e-36, Sum P(2) = 1.4e-36
Identities = 10/47 (21%), Positives = 21/47 (44%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHR-HNSDRKK 950
END + D + + L+ E++++ HR + +D +K
Sbjct: 502 ENDQRFKAVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRK 548
Score = 37 (18.1 bits), Expect = 1.9e-138, Sum P(2) = 1.9e-138
Identities = 7/25 (28%), Positives = 14/25 (56%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKD 914
+S + +++ H + S+RSG D
Sbjct: 925 NSPESESENRHKRQKKESSRRSGND 949
>RGD|1311401 [details] [associations]
symbol:Prpf40a "PRP40 pre-mRNA processing factor 40 homolog A
(S. cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008360 "regulation of cell shape"
evidence=IEA;ISO] [GO:0016363 "nuclear matrix" evidence=IEA;ISO]
[GO:0016477 "cell migration" evidence=IEA;ISO] [GO:0032465
"regulation of cytokinesis" evidence=IEA;ISO] [GO:0070064
"proline-rich region binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 RGD:1311401
GO:GO:0007010 GO:GO:0016477 GO:GO:0008360 GO:GO:0016363
Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0032465 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
KO:K12821 CTD:55660 GeneTree:ENSGT00530000062987 OrthoDB:EOG418BN6
EMBL:CH473983 IPI:IPI00372759 RefSeq:NP_001099950.1
UniGene:Rn.95204 Ensembl:ENSRNOT00000006549 GeneID:295607
KEGG:rno:295607 UCSC:RGD:1311401 NextBio:639767 Uniprot:D3ZJ92
Length = 953
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 229/824 (27%), Positives = 365/824 (44%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+A G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 AASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAP-SSAD 310
YYYN TK+S+W+ P EL+ ++G Q+ + S +++KA SS
Sbjct: 198 YYYNSQTKESRWAKPKELE---------DLEGYQNTIVAGGLITKSNLHAMIKAEESSKQ 248
Query: 311 IXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFP-KTVDAI-- 367
A AN P TV ++
Sbjct: 249 EECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAANANTSTTPTNTVGSVPV 308
Query: 368 APMIDVSSSIGEAV-TDNTV---AEAKNNLSNMSA-SDLVG--ASDKVPPPVTEETRKDA 420
AP +V+S + AV +NTV AE + L+N +A DL G +S+ P +ET D
Sbjct: 309 APEPEVTSIVATAVDNENTVTASAEEQAQLANTTALQDLSGDISSNTGEEPPKQETVTDF 368
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
K + EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY
Sbjct: 369 T--PKKEE--EESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 424
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
AL L E+K AFN Y Q +K++ EE R K K+A++ +++ LE ++TS+TR+ KA
Sbjct: 425 SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ 484
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
MF E + A+ ERDR ++++D L L +KE+ +A++ RKRN + L++ + +
Sbjct: 485 MFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYS 543
Query: 601 TQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE 654
T W + Q L DE +DK D L F + +
Sbjct: 544 TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQ 603
Query: 655 RKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE 714
RKNR+ F+ ++ G L + ++W + + + + GST DLF+ VE
Sbjct: 604 RKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP-GSTALDLFKFYVE 662
Query: 715 ELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLI 774
+L+ ++ ++K IKD +K + + TFEDF A + S + N+KL F+ LL
Sbjct: 663 DLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLE 722
Query: 775 XXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDE 829
F +L + I + WE+ R+ F I E
Sbjct: 723 KAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLE 782
Query: 830 SICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXX 889
S + +F +F+ L+ + + +
Sbjct: 783 SERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQ 842
Query: 890 HSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNS 946
S+ A S+H SAE++ K+S K K ++RH+S D E EKD+ +
Sbjct: 843 RSESHSA-SEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKEKDRESEK 901
Query: 947 DRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
DR + R ES+++S K+ +D+ N + L +GE
Sbjct: 902 DRSRQRS-----ESKHKSPKKKTGKDSGNWDTSGSE---LSEGE 937
>UNIPROTKB|O75400 [details] [associations]
symbol:PRPF40A "Pre-mRNA-processing factor 40 homolog A"
species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0070064 "proline-rich region binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007010 "cytoskeleton
organization" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0032465 "regulation of cytokinesis" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0007010 GO:GO:0051301 GO:GO:0016477 GO:GO:0008380
GO:GO:0008360 GO:GO:0016607 GO:GO:0006397 GO:GO:0007049
GO:GO:0016363 Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AC079344
UniGene:Hs.643580 PDB:2DYF PDBsum:2DYF GO:GO:0032465
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 EMBL:AC012443 KO:K12821 eggNOG:COG5104
EMBL:AK000592 EMBL:AK024810 EMBL:AF049523 EMBL:AF049524
EMBL:AF049528 EMBL:BC011788 EMBL:BC027178 EMBL:U70667 EMBL:AF155096
EMBL:AF151059 IPI:IPI00337385 IPI:IPI00337386 IPI:IPI00337387
IPI:IPI00915929 RefSeq:NP_060362.3 PDB:1UZC PDB:1YWI PDB:1YWJ
PDB:1ZR7 PDB:2CQN PDB:2KZG PDB:2L5F PDB:2L9V PDB:2LKS PDBsum:1UZC
PDBsum:1YWI PDBsum:1YWJ PDBsum:1ZR7 PDBsum:2CQN PDBsum:2KZG
PDBsum:2L5F PDBsum:2L9V PDBsum:2LKS ProteinModelPortal:O75400
SMR:O75400 IntAct:O75400 MINT:MINT-1180299 STRING:O75400
PhosphoSite:O75400 PaxDb:O75400 PRIDE:O75400 DNASU:55660
Ensembl:ENST00000410080 GeneID:55660 KEGG:hsa:55660 UCSC:uc002tyi.2
CTD:55660 GeneCards:GC02M153508 HGNC:HGNC:16463 HPA:HPA038273
MIM:612941 neXtProt:NX_O75400 PharmGKB:PA28195 HOVERGEN:HBG059634
ChiTaRS:PRPF40A EvolutionaryTrace:O75400 GenomeRNAi:55660
NextBio:60391 PMAP-CutDB:O75400 ArrayExpress:O75400 Bgee:O75400
CleanEx:HS_PRPF40A Genevestigator:O75400 GermOnline:ENSG00000196504
Uniprot:O75400
Length = 957
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 220/824 (26%), Positives = 362/824 (43%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+A G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 TASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA-- 309
YYYN TK+S+W+ P EL+ ++G Q+ S + S +++KA S+
Sbjct: 198 YYYNSQTKESRWAKPKELE---------DLEGYQNTIVAGSLITKSNLHAMIKAEESSKQ 248
Query: 310 DIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFPK---TVDA 366
+ + A ANA+ TV
Sbjct: 249 EECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSG 308
Query: 367 IAPMI---DVSSSIGEAV-TDNTVAEAKNNLSNMSASDLV-GASDKVPPPVTEETRK-DA 420
P++ +V+S + V +NTV + + ++++ + S +V EET K +
Sbjct: 309 TVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQET 368
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
V EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY
Sbjct: 369 VADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 428
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
AL L E+K AFN Y Q +K++ EE R K K+A++ +++ LE ++TS+TR+ KA
Sbjct: 429 SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ 488
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
MF E + A+ ERDR ++++D L L +KE+ +A++ RKRN + L++ + +
Sbjct: 489 MFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYS 547
Query: 601 TQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE 654
T W + Q L DE +DK D L F + +
Sbjct: 548 TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQ 607
Query: 655 RKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE 714
RKNR+ F+ ++ G L + ++W + + + + GST DLF+ VE
Sbjct: 608 RKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP-GSTALDLFKFYVE 666
Query: 715 ELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLI 774
+L+ ++ ++K IKD +K + + TFEDF A + S + N+KL F+ LL
Sbjct: 667 DLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLE 726
Query: 775 XXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDE 829
F +L + I + WE+ R+ F I E
Sbjct: 727 KAEAREREREKEEARKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLE 786
Query: 830 SICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXX 889
S + +F +F+ L+ + + +
Sbjct: 787 SERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQ 846
Query: 890 HSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNS 946
S+ A S+H SAE++ K+S K K ++RH+S D E EKD+ +
Sbjct: 847 RSESRSA-SEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEK 905
Query: 947 DRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
DR + R ES+++S K+ +D+ N + L +GE
Sbjct: 906 DRTRQRS-----ESKHKSPKKKTGKDSGNWDTSGSE---LSEGE 941
>MGI|MGI:1860512 [details] [associations]
symbol:Prpf40a "PRP40 pre-mRNA processing factor 40 homolog
A (yeast)" species:10090 "Mus musculus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=ISO] [GO:0008360 "regulation
of cell shape" evidence=ISO] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016363 "nuclear matrix" evidence=ISO;IDA]
[GO:0016477 "cell migration" evidence=ISO] [GO:0032465 "regulation
of cytokinesis" evidence=ISO] [GO:0070064 "proline-rich region
binding" evidence=IDA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 MGI:MGI:1860512
GO:GO:0007010 GO:GO:0016477 GO:GO:0008380 GO:GO:0008360
GO:GO:0016607 GO:GO:0006397 GO:GO:0070064 GO:GO:0016363
Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0032465 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
KO:K12821 eggNOG:COG5104 CTD:55660 HOVERGEN:HBG059634 EMBL:AF135439
EMBL:AK041205 EMBL:AK051375 EMBL:AK087963 EMBL:U40747
IPI:IPI00284213 IPI:IPI00338887 PIR:S64713 RefSeq:NP_061255.1
UniGene:Mm.257474 UniGene:Mm.392945 UniGene:Mm.393219
ProteinModelPortal:Q9R1C7 SMR:Q9R1C7 IntAct:Q9R1C7 STRING:Q9R1C7
PhosphoSite:Q9R1C7 PaxDb:Q9R1C7 PRIDE:Q9R1C7 DNASU:56194
Ensembl:ENSMUST00000076313 GeneID:56194 KEGG:mmu:56194
GeneTree:ENSGT00530000062987 HOGENOM:HOG000231802 InParanoid:Q9R1C7
OMA:QETVADF OrthoDB:EOG418BN6 NextBio:312006 Bgee:Q9R1C7
Genevestigator:Q9R1C7 GermOnline:ENSMUSG00000061136 Uniprot:Q9R1C7
Length = 953
Score = 751 (269.4 bits), Expect = 1.9e-74, P = 1.9e-74
Identities = 227/824 (27%), Positives = 363/824 (44%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+A G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 AASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAP-SSAD 310
YYYN TK+S+W+ P EL+ ++G Q+ + S +++KA SS
Sbjct: 198 YYYNSQTKESRWAKPKELE---------DLEGYQNTIVAGGLITKSNLHAMIKAEESSKQ 248
Query: 311 IXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFP-KTVDAI-- 367
A AN P TV ++
Sbjct: 249 EECTTASTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAANANTSTTPTNTVGSVPV 308
Query: 368 APMIDVSSSIGEAV-TDNTVA---EAKNNLSNMSA-SDLVG--ASDKVPPPVTEETRKDA 420
AP +V+S + AV +NTV E + L+N +A DL G +S+ P +ET D
Sbjct: 309 APEPEVTSIVATAVDNENTVTVSTEEQAQLANTTAIQDLSGDISSNTGEEPAKQETVSDF 368
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
K + EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY
Sbjct: 369 T--PKKEE--EESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 424
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
AL L E+K AFN Y Q +K++ EE R K K+A++ +++ LE ++TS+TR+ KA
Sbjct: 425 SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ 484
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
MF E + A+ ERDR ++++D L L +KE+ +A++ RKRN + L++ + +
Sbjct: 485 MFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYS 543
Query: 601 TQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE 654
T W + Q L DE +DK D L F + +
Sbjct: 544 TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQ 603
Query: 655 RKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE 714
RKNR+ F+ ++ G L + ++W + + + + GST DLF+ VE
Sbjct: 604 RKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP-GSTALDLFKFYVE 662
Query: 715 ELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLI 774
+L+ ++ ++K IKD +K + + TFEDF A + S + N+KL F+ LL
Sbjct: 663 DLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLE 722
Query: 775 XXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDE 829
F +L + I + WE+ R+ F I E
Sbjct: 723 KAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLE 782
Query: 830 SICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXX 889
S + +F +F+ L+ + + +
Sbjct: 783 SERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESDDDDSHSKKKRQ 842
Query: 890 HSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNS 946
S+ A S+ SAE++ K+S K K ++RH+S D E EKD+ +
Sbjct: 843 RSESHSA-SERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKEKDRDSEK 901
Query: 947 DRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
DR + R ES+++S K+ +D+ N + L +GE
Sbjct: 902 DRSRQRS-----ESKHKSPKKKTGKDSGNWDTSGSE---LSEGE 937
>UNIPROTKB|F1RQH2 [details] [associations]
symbol:PRPF40A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0016477
"cell migration" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0007010 GO:GO:0016477 GO:GO:0008360
GO:GO:0016363 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0032465
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 KO:K12821 CTD:55660 GeneTree:ENSGT00530000062987
OMA:QETVADF EMBL:CU571020 EMBL:CU915608 RefSeq:NP_001231502.1
UniGene:Ssc.6297 Ensembl:ENSSSCT00000017278 GeneID:100157937
KEGG:ssc:100157937 Uniprot:F1RQH2
Length = 957
Score = 750 (269.1 bits), Expect = 2.5e-74, P = 2.5e-74
Identities = 221/824 (26%), Positives = 361/824 (43%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+ G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 ATSGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA-- 309
YYYN TK+S+W+ P EL+ ++G Q+ S + S +++KA S+
Sbjct: 198 YYYNSQTKESRWAKPKELE---------DLEGYQNTIVAGSLITKSNLHAMIKAEESSKQ 248
Query: 310 DIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFPK---TVDA 366
+ + A ANA TV
Sbjct: 249 EECTTTSAAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASSTVGG 308
Query: 367 IAPMI---DVSSSIGEAV-TDNTVAEAKNNLSNMSASDLV-GASDKVPPPVTEETRK-DA 420
P++ +V+S + V +NTV + + ++++ V S +V EET K +A
Sbjct: 309 TVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAVQDQSVEVSSNTGEETSKQEA 368
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
V EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY
Sbjct: 369 VADFTPKKEEEENQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 428
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
AL L E+K AFN Y Q +K++ EE R K K+A++ +++ LE ++TS+TR+ KA
Sbjct: 429 SALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQ 488
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
MF E + A+ ERDR ++++D L L +KE+ +A++ RKRN + L++ + +
Sbjct: 489 MFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYS 547
Query: 601 TQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE 654
T W + Q L DE +DK D L F + +
Sbjct: 548 TTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQ 607
Query: 655 RKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE 714
RKNR+ F+ ++ G L + ++W + + + + GST DLF+ VE
Sbjct: 608 RKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP-GSTALDLFKFYVE 666
Query: 715 ELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLI 774
+L+ ++ ++K IKD +K + + TFEDF A + S + N+KL F+ LL
Sbjct: 667 DLKARYHDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLE 726
Query: 775 XXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDE 829
F +L + I + WE+ R+ F I E
Sbjct: 727 KAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLE 786
Query: 830 SICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXX 889
S + +F +F+ L+ + + +
Sbjct: 787 SERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQ 846
Query: 890 HSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNS 946
S+ A S+H SAE++ K+S K K ++RH+S D E EKD+ +
Sbjct: 847 RSESRSA-SEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEK 905
Query: 947 DRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
DR + R ES+++S K+ +D+ N + L +GE
Sbjct: 906 DRTRQRS-----ESKHKSPKKKTGKDSGNWDTSGSE---LSEGE 941
>UNIPROTKB|G3MZC7 [details] [associations]
symbol:PRPF40A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0032465 "regulation of cytokinesis" evidence=IEA] [GO:0016477
"cell migration" evidence=IEA] [GO:0016363 "nuclear matrix"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0007010 GO:GO:0016477 GO:GO:0008360
GO:GO:0016363 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0032465
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 GeneTree:ENSGT00530000062987 OMA:QETVADF
EMBL:DAAA02004583 Ensembl:ENSBTAT00000063676 Uniprot:G3MZC7
Length = 958
Score = 749 (268.7 bits), Expect = 3.1e-74, P = 3.1e-74
Identities = 214/818 (26%), Positives = 350/818 (42%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+ G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 TTSGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSADI 311
YYYN TK+S+W+ P EL+ E + + G+ T N I S
Sbjct: 198 YYYNSQTKESRWAKPKELE-DLEGYQNTIVAGSLI-TKSNLHAMIKAEESRYSKQEECTT 255
Query: 312 XXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFPKTVDAIAPMI 371
+ + + TV P++
Sbjct: 256 TSAAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANASASTSASSTVSGTVPVV 315
Query: 372 ---DVSSSIGEAV-TDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKV 426
+V+S + V +NTV + + ++++ V +V EET K + V
Sbjct: 316 PEPEVTSIVATVVDNENTVTISTEEQAQLTSTPSVQDQSEVSSNTGEETSKQETVADFTP 375
Query: 427 SDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTL 486
EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY AL L
Sbjct: 376 KKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKL 435
Query: 487 GERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDE 546
E+K AFN Y Q +K++ EE R K K+A++ +++ LE ++TS+TR+ KA MF E
Sbjct: 436 SEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEME 495
Query: 547 RFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKV 606
+ A+ ERDR ++++D L L +KE+ +A++ RKRN + L++ + +T W +
Sbjct: 496 VWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEA 554
Query: 607 QDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDE 660
Q L DE +DK D L F + +RKNR+
Sbjct: 555 QQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRES 614
Query: 661 FRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQF 720
F+ ++ G L + ++W + + + + GST DLF+ VE+L+ ++
Sbjct: 615 FQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQP-GSTALDLFKFYVEDLKARY 673
Query: 721 QEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXX 780
++K IKD +K + + TFEDF A + S + N+KL F+ LL
Sbjct: 674 HDEKKIIKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEARE 733
Query: 781 XXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDESICRGV 835
F +L + I + WE+ R+ F I ES + +
Sbjct: 734 REREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRI 793
Query: 836 FDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXXXXXXXHSKKDG 895
F +F+ L+ + + + S+
Sbjct: 794 FKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSDDDDSHSKKKRQRSESRS 853
Query: 896 ADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNSDRKKPR 952
A S+H SAE++ K+S K K ++RH+S D E EKD+ + DR + R
Sbjct: 854 A-SEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDREGEKDRTRQR 912
Query: 953 RLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
ES+++S K+ +D+ N + L +GE
Sbjct: 913 S-----ESKHKSPKKKTGKDSGNWDTSGSE---LSEGE 942
>DICTYBASE|DDB_G0283543 [details] [associations]
symbol:prp40 "FF domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0005685 "U1 snRNP"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS50020
SMART:SM00456 dictyBase:DDB_G0283543 GenomeReviews:CM000153_GR
EMBL:AAFI02000055 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0000398
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 GO:GO:0005685 KO:K12821 InterPro:IPR027237
PANTHER:PTHR11864:SF0 eggNOG:COG5104 RefSeq:XP_639002.1
ProteinModelPortal:Q54QY2 EnsemblProtists:DDB0233540 GeneID:8624132
KEGG:ddi:DDB_G0283543 InParanoid:Q54QY2 OMA:ERRIKQK Uniprot:Q54QY2
Length = 681
Score = 521 (188.5 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 120/420 (28%), Positives = 211/420 (50%)
Query: 431 EEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERK 490
+++ +Q+ NK + FK LL ++ S T+++AL++I ND RY L+T+ ERK
Sbjct: 163 QQQQQQQQQQQQQNKEDPIQTFKNLLTDNSISSICTFEKALKSIANDERYQVLKTMSERK 222
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKA 550
F +Y +KK + EE+R K KKA++D+ ++L +S E+T W +A FE++ R++A
Sbjct: 223 QVFLDYQVDRKKVEQEEKRKKEKKAKEDFIQLLRDSKEVTPLMSWRRASLYFESEPRWEA 282
Query: 551 LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRL 610
+E ER+R+ + DH+ EL+Q+E+ + +K + R+ LE I TQWRKV+D+
Sbjct: 283 IESERERESLLHDHIQELEQQEKNQLMSIKKEQMKILRQKLELDPSITVFTQWRKVRDQF 342
Query: 611 EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVA 670
E D+ LDK D L +F K RK+RD FR+L+
Sbjct: 343 ENDDVFQVLDKFDFLTVFENFIRDLEKKLDDQKRLEKEKLKKDSRKDRDNFRELLNEKFK 402
Query: 671 LGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDA 730
G L A T W+ + + ++ ++ ++ + GSTP +LF D +EL+ +++ D ++K+
Sbjct: 403 NGELHALTKWKIFKLNNENHQSFINLSQKSIGSTPLELFSDFKDELEIKYENDYKKLKEI 462
Query: 731 VKLRKITLS-STWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXXXXXXXXXXX 789
+K S + T E K+ + + I + N + L
Sbjct: 463 LKETNFKYSPESTTLESLKSEFSKHSNYNLIQEFNFLPYLEYLKYKEESREKNLAKKKKK 522
Query: 790 XXXXFFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAKD 849
F LL K I+ +S W + + ++E +E+ +GD+ +F +++ L + A D
Sbjct: 523 RISQFKILLTETKVINKSSQWSDIQPIIESKKEYIDLGDDQERLRIFKDYIEFLVQNALD 582
Score = 159 (61.0 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 36/114 (31%), Positives = 62/114 (54%)
Query: 196 VQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADAST---------DWKEFTS 246
+ +DW E ADG+++Y++K TRVS W+ P +L + ++ S DWKE+ +
Sbjct: 1 MSSDWVE-AIADGKKFYYHKVTRVSVWEIPEDLKSPAPSSNDSNSNNQPVIIGDWKEYKT 59
Query: 247 PDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQS-ETSPNSQTSISFP 299
G+KYYYN ++ +W P E + ++ A + T S + S + T+I+ P
Sbjct: 60 DKGQKYYYNTISGVRQWDAPPEFQ--QKLASTTTSTSTSSPQLSSSGSTTITTP 111
Score = 141 (54.7 bits), Expect = 6.7e-19, Sum P(3) = 6.7e-19
Identities = 50/191 (26%), Positives = 99/191 (51%)
Query: 430 LEEKTVEQEHFAYANKLEAKNAFKALL-ESANVGSDWTWDQALRAIINDRRYGALRTLGE 488
++ K VEQE K +AK F LL +S V +W +A ++ R+ A+ + E
Sbjct: 230 VDRKKVEQEEKRKKEK-KAKEDFIQLLRDSKEVTPLMSWRRASLYFESEPRWEAIESERE 288
Query: 489 RKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSS----TRWSKAVTMFEN 544
R++ ++++ Q+ +Q + + + +KK + K+L + +EL S T+W K FEN
Sbjct: 289 RESLLHDHI-QELEQQEKNQLMSIKK---EQMKILRQKLELDPSITVFTQWRKVRDQFEN 344
Query: 545 DERFKALER-------ERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF- 596
D+ F+ L++ E +D+ + LD+ K+ E+ K +++ +++ +R+ L F
Sbjct: 345 DDVFQVLDKFDFLTVFENFIRDL-EKKLDDQKRLEKEKLKKDSRKDRDNFRELLNE-KFK 402
Query: 597 ---IKANTQWR 604
+ A T+W+
Sbjct: 403 NGELHALTKWK 413
Score = 60 (26.2 bits), Expect = 1.9e-68, Sum P(3) = 1.9e-68
Identities = 23/98 (23%), Positives = 39/98 (39%)
Query: 893 KDGADSDHDDSAENDSKRSGK--DNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
++ D + D + E + S K ND+ K+ +S D+LD+ ++ + + S
Sbjct: 578 QNALDEEEDGNEEGELVLSPKKPSNDQSSSKKRRSYIDNLDDEDRYGTGSGSGSGSGGGS 637
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+ R R RD GS + GD D D
Sbjct: 638 ----GGSSSGGGSGRDSRDSRDRDRGSDR-GDRRDDRD 670
Score = 44 (20.5 bits), Expect = 8.8e-67, Sum P(3) = 8.8e-67
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 891 SKKDGADS-DHDDSAENDSKRSGKDNDKKHRKRHQ 924
S +D DS D D ++ +R +D + K+ +
Sbjct: 646 SGRDSRDSRDRDRGSDRGDRRDDRDRGRSSHKKEK 680
Score = 43 (20.2 bits), Expect = 1.1e-66, Sum P(3) = 1.1e-66
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 925 SAHDSLDENEKDRSKNPHRHNSDRKKPR 952
S DS D ++DR + DR + R
Sbjct: 646 SGRDSRDSRDRDRGSDRGDRRDDRDRGR 673
Score = 38 (18.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 7/48 (14%), Positives = 22/48 (45%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
++ N+S + + D K K ++LD ++ + + + +++
Sbjct: 128 NSNNNSNNNNNNKDLKESKDSNINTNNLDTQQQQQQQQQQQQQQQQQQ 175
>ZFIN|ZDB-GENE-030131-274 [details] [associations]
symbol:prpf40a "PRP40 pre-mRNA processing factor 40
homolog A (yeast)" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 ZFIN:ZDB-GENE-030131-274
Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
HSSP:O75400 KO:K12821 eggNOG:COG5104 OMA:WEKPLEL CTD:55660
HOVERGEN:HBG059634 GeneTree:ENSGT00530000062987
HOGENOM:HOG000231802 OrthoDB:EOG418BN6 EMBL:CR925815 EMBL:BC049307
IPI:IPI00503410 RefSeq:NP_938170.1 UniGene:Dr.76804 SMR:Q7ZUE4
STRING:Q7ZUE4 Ensembl:ENSDART00000081326 GeneID:321555
KEGG:dre:321555 InParanoid:Q7ZUE4 NextBio:20807424 Uniprot:Q7ZUE4
Length = 851
Score = 525 (189.9 bits), Expect = 6.3e-68, Sum P(3) = 6.3e-68
Identities = 166/648 (25%), Positives = 286/648 (44%)
Query: 361 PKTVDAIAPMIDVSSSIGE-AVTDNTVAEA--KNNLSNMSASDLVGASDKVPPPVTEETR 417
P T A+ + S ++ A T+ T+A + S++ A +SD V TEET
Sbjct: 201 PGTTPALTAQNESSVTVAPVAETEATMATGTIEEQPSHVPAQVAEVSSD-VAVNSTEET- 258
Query: 418 KDAVRGEKVSDALEEKTVE--QEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAII 475
+V + +D +E+ E ++ + + K EAK AFK LL+ V S+ +W+QA++ II
Sbjct: 259 -PSVETQPSNDVSKEERPELVKKVYKWNTKEEAKQAFKELLKEKGVSSNASWEQAMKLII 317
Query: 476 NDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRW 535
ND RY AL L E+K AFN Y Q +K++ EE R+K K++++ +++ LE ++TS+TR+
Sbjct: 318 NDPRYSALPKLSEKKQAFNAYKVQTEKEEKEEARIKYKESKETFQRFLENHEKMTSTTRY 377
Query: 536 SKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCD 595
KA MF + E + + ERDR ++++D L L +KE+ +A++ RKRN + L++
Sbjct: 378 KKAEQMFGDQEVWSCVP-ERDRLEIYEDVLFYLAKKEKEQAKQLRKRNWEALKNILDNMA 436
Query: 596 FIKANTQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXX 649
+ T W + Q L DE +DK D L F
Sbjct: 437 NVTYRTTWSEAQQYLLDNPTFAEDEELQNMDKEDALICFEEHIRALEKEEEDEKQKTLLR 496
Query: 650 XSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLF 709
+ +RKNR+ F+K ++ G L + + W + + + + GSTP DLF
Sbjct: 497 ERRRQRKNRESFQKFLDELHDHGQLHSMSAWMEMYPTISADIRFSNMLGQP-GSTPLDLF 555
Query: 710 EDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIF 769
+ VE+L+ ++ ++K IKD +K + + FEDF + + D + + N+KL F
Sbjct: 556 KFYVEDLKARYHDEKRIIKDILKDKGFLVEINTGFEDFGSVISSDKRATTLDAGNIKLAF 615
Query: 770 DDLLIXXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFS 824
+ LL F +L + + +TWE R+ F
Sbjct: 616 NSLLEKAEAREREREKEEARKMKRKEAAFKSMLKQATPPLEPEATWEGVRERFLKEPAFE 675
Query: 825 SIGDESICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXXXQGXXXXXXXX 884
I ES + +F +F+ L+ + + +
Sbjct: 676 DITLESERKRIFKDFMHVLEHECQHHHSKTKKHSKKSKKHHRKRSRSRSGSESEEDEYHT 735
Query: 885 XXXXXHSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH 942
+ K + S+H S E++ K+S K K ++RH+S E+E +R +
Sbjct: 736 KKKKRSTSK--SPSEHSSSGESERSYKKSKKHKKKGKKRRHKSGSP---ESEGERERKGR 790
Query: 943 RHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ D++ + A + KR G +G +L +GE
Sbjct: 791 EKDKDKENDKSRAKLRGESKQKSPKRKSAKEEGGWDTSGS--ELSEGE 836
Score = 222 (83.2 bits), Expect = 6.3e-68, Sum P(3) = 6.3e-68
Identities = 48/120 (40%), Positives = 68/120 (56%)
Query: 189 QPKSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPD 248
QPK ++ W EH S DG+ YY+N T+ STW+KP EL + E+ + WKE+ S
Sbjct: 105 QPKK----KSVWTEHKSLDGKIYYYNTETKQSTWEKPDELKSPAEQMLSKCPWKEYKSDT 160
Query: 249 GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFP--SSVVKAP 306
G+ YYYN TK+S+W+ P EL+ E KA GT +P + +++ SSV AP
Sbjct: 161 GKPYYYNSQTKESRWTKPKELE-DLEAMIKAEENGTADVVAPGTTPALTAQNESSVTVAP 219
Score = 120 (47.3 bits), Expect = 3.0e-57, Sum P(3) = 3.0e-57
Identities = 32/70 (45%), Positives = 37/70 (52%)
Query: 233 ERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQA-EKASIKGTQSETS-P 290
E+ + W E S DG+ YYYN TKQS W PDELK EQ K K +S+T P
Sbjct: 104 EQPKKKSVWTEHKSLDGKIYYYNTETKQSTWEKPDELKSPAEQMLSKCPWKEYKSDTGKP 163
Query: 291 ---NSQTSIS 297
NSQT S
Sbjct: 164 YYYNSQTKES 173
Score = 102 (41.0 bits), Expect = 4.1e-20, Sum P(3) = 4.1e-20
Identities = 26/90 (28%), Positives = 43/90 (47%)
Query: 908 SKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENE-SRH 966
+K+ K + K HRKR +S S E+E+D + S K P +S+ ESE +
Sbjct: 705 TKKHSKKSKKHHRKRSRSRSGS--ESEEDEYHTKKKKRSTSKSPSEHSSSGESERSYKKS 762
Query: 967 KRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
K+H++ + K+G E + E G +
Sbjct: 763 KKHKKKGKKRRHKSGSPESEGERERKGREK 792
Score = 48 (22.0 bits), Expect = 6.3e-68, Sum P(3) = 6.3e-68
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 8 APYSGAQVPHQPPMV-GSMDPPRGQGGLIMNAGFPS-QPLQ 46
AP G PPM+ G M PPR I G P P++
Sbjct: 43 APPIGQMPAMMPPMMPGMMMPPRLPAASIQPTGPPGVSPVE 83
>ASPGD|ASPL0000052549 [details] [associations]
symbol:AN1249 species:162425 "Emericella nidulans"
[GO:0005685 "U1 snRNP" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=IEA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 EMBL:BN001308
EMBL:AACD01000017 Gene3D:2.20.70.10 SUPFAM:SSF51045
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0
eggNOG:COG5104 OMA:WEKPLEL OrthoDB:EOG41VPBS RefSeq:XP_658853.1
ProteinModelPortal:Q5BDY0 EnsemblFungi:CADANIAT00001374
GeneID:2877027 KEGG:ani:AN1249.2 HOGENOM:HOG000207896
Uniprot:Q5BDY0
Length = 798
Score = 434 (157.8 bits), Expect = 7.6e-63, Sum P(3) = 7.6e-63
Identities = 108/419 (25%), Positives = 199/419 (47%)
Query: 442 YANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK 501
Y + EA+ AF +L+ NV DWTW+Q +R I D +Y AL+ +RK AF +Y + +
Sbjct: 156 YGSLEEAEAAFMKMLKRHNVQPDWTWEQTMRETIKDPQYRALKDPRDRKIAFEKYAVEVR 215
Query: 502 KQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMF 561
Q+ + + + K R D+ ML+ E+ TRW + E + F++ E +R+ +F
Sbjct: 216 SQEKDRAKERFAKLRADFNTMLKRHPEIKHYTRWKTIRPIIEGETIFRSTNDENERRQLF 275
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQ------DRLEADER 615
++++ ELK++ K R+ + E L+S + ++ T+W + Q +R++ +E+
Sbjct: 276 EEYILELKKEHAEKEAAARRAAMDELVGILKSMN-LEPYTRWSEAQAIIQSNERVQNEEK 334
Query: 616 CSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLT 675
L K D L F ++ ER R++F +L+ + G +
Sbjct: 335 FKALSKSDILTAFENHIKSLERAFNDARQQQKAAKARKERHAREQFVELLNELRSKGVIK 394
Query: 676 AKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRK 735
A + W +++ P Y+ + N SGS+P DLF DVVEE ++ + + + D + +
Sbjct: 395 AGSKWSKIYPIIREDPRYLGILGN-SGSSPLDLFWDVVEEEERSLRGPRNDVLDVLDDNR 453
Query: 736 ITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXXXXXXXXXXXXXXXFF 795
++S TFE+F + V D + I L++IF +
Sbjct: 454 FDVTSKTTFEEFNSVVSSDRRTAKIDPEILQVIFQRIQEKALRRNEEEKHAADRHQRRAI 513
Query: 796 DLLCS-VKEIS----ATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAKD 849
D L S +K + +T TW+ + LE E+ ++ + + + FD+ + +LKE+ +D
Sbjct: 514 DALRSRLKRLEPPLRSTDTWDQVKPTLERYDEYKALESDELRQIAFDKVIRRLKEKEED 572
Score = 218 (81.8 bits), Expect = 7.6e-63, Sum P(3) = 7.6e-63
Identities = 41/91 (45%), Positives = 59/91 (64%)
Query: 190 PKSAE-GVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPD 248
P +A G + W+E + +GR YY+N +T+ + W KP ELMT +ERA A+ WKE+T+
Sbjct: 3 PMNAPTGPASLWQEARTPEGRAYYYNVQTKATQWTKPVELMTPVERALANQPWKEYTAEG 62
Query: 249 GRKYYYNKVTKQSKWSLPDELKLAREQAEKA 279
GRKY+ N TK+S W +P+ K A QA+ A
Sbjct: 63 GRKYWSNSETKESTWEMPEAYKNALAQAQAA 93
Score = 109 (43.4 bits), Expect = 7.6e-63, Sum P(3) = 7.6e-63
Identities = 29/100 (29%), Positives = 48/100 (48%)
Query: 902 DSAENDSKRSGKDNDKKHRKRHQS---AHDSLDENEKDRSKNPHRHNSDRKKPRRLASTP 958
D+ E D +++ D ++ +RK + DE ++DR ++ R + DR + R ST
Sbjct: 620 DAYEADRRKAQADRERSYRKAASGLSPVRERWDERDRDRERDRDRRDRDRDRDRE-RSTR 678
Query: 959 ESENESRHKRHRRDNRNGS-RKNGDHEDLEDG-EYGGESR 996
+ R +R R + R R GD D +YGG+SR
Sbjct: 679 SLSHYERERRDREEERERLYRTRGDPRGSRDELDYGGDSR 718
Score = 93 (37.8 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 47/188 (25%), Positives = 83/188 (44%)
Query: 407 KVPPPVTEETRKDAVRGEKVSDALEE--KTVEQEHFAYANKLEAKNAFKALLESA--NVG 462
K+ P + E+ R + G S L+ VE+E + +N +L+ +V
Sbjct: 401 KIYPIIREDPRYLGILGNSGSSPLDLFWDVVEEEERSLRGP---RNDVLDVLDDNRFDVT 457
Query: 463 SDWTWDQALRAIINDRRYGA-----LRTLGER--KTAFNEYLGQKKKQDAEERRLKLKKA 515
S T+++ + +DRR L+ + +R + A +K D +RR +
Sbjct: 458 SKTTFEEFNSVVSSDRRTAKIDPEILQVIFQRIQEKALRRNEEEKHAADRHQRRA-IDAL 516
Query: 516 RDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAK 575
R K+ LE L S+ W + E + +KALE + R+ FD + LK+KE
Sbjct: 517 RSRLKR-LEPP--LRSTDTWDQVKPTLERYDEYKALESDELRQIAFDKVIRRLKEKEE-D 572
Query: 576 AQEERKRN 583
A+ +R+R+
Sbjct: 573 AERDRERD 580
Score = 93 (37.8 bits), Expect = 3.7e-25, Sum P(3) = 3.7e-25
Identities = 55/251 (21%), Positives = 109/251 (43%)
Query: 381 VTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEEKTVEQEHF 440
+ N + + +S SD++ A + + E DA + +K + A +E+ ++
Sbjct: 323 IQSNERVQNEEKFKALSKSDILTAFENHIKSL-ERAFNDARQQQKAAKARKERHAREQFV 381
Query: 441 AYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQK 500
N+L +K KA GS W+ + I D RY L LG ++ +
Sbjct: 382 ELLNELRSKGVIKA-------GSKWS--KIYPIIREDPRY--LGILGNSGSSPLDLFWDV 430
Query: 501 KKQDAEERRLKLKKARDDYKKMLEES-VELTSSTRWSKAVTMFENDERFKALERERDRKD 559
++ EER L+ R+D +L+++ ++TS T + + ++ +D R ++ E
Sbjct: 431 VEE--EER--SLRGPRNDVLDVLDDNRFDVTSKTTFEEFNSVVSSDRRTAKIDPEI--LQ 484
Query: 560 MFDDHLDE--LKQKERAK--AQEERKRNIIEYRKFLESCDF-IKANTQWRKVQDRLEADE 614
+ + E L++ E K A ++R I R L+ + +++ W +V+ LE +
Sbjct: 485 VIFQRIQEKALRRNEEEKHAADRHQRRAIDALRSRLKRLEPPLRSTDTWDQVKPTLERYD 544
Query: 615 RCSRLDKMDRL 625
L+ D L
Sbjct: 545 EYKALES-DEL 554
Score = 69 (29.3 bits), Expect = 1.2e-58, Sum P(3) = 1.2e-58
Identities = 26/106 (24%), Positives = 49/106 (46%)
Query: 893 KDGADSDHDDSAENDSK------RSGKDNDKKHRKRHQS------AHDSLDENEKDRSKN 940
+D D D D E ++ R +D +++ + +++ + D LD RS
Sbjct: 662 RDRRDRDRDRDRERSTRSLSHYERERRDREEERERLYRTRGDPRGSRDELDYGGDSRSAT 721
Query: 941 PHRHNSDRKKPRRLASTPESENESRHKRHRRDNRN-GSRKNGDHED 985
+++R+ RR S ES KR+RRD+R+ +RK+ + +
Sbjct: 722 GATASNERR--RRRDSDTESVASRSTKRYRRDSRDRDARKDRERRE 765
Score = 67 (28.6 bits), Expect = 1.9e-58, Sum P(3) = 1.9e-58
Identities = 22/83 (26%), Positives = 40/83 (48%)
Query: 899 DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPR-RLAST 957
+ ++ AE D +R D D+ R+ H HD +DR ++ + +R+ P R + T
Sbjct: 568 EKEEDAERDRER---DRDRGSRRDHH--HD------RDRDRDYRSYRGERRGPASRHSRT 616
Query: 958 PESEN-ESRHKRHRRDNRNGSRK 979
PE + E+ ++ + D RK
Sbjct: 617 PEPDAYEADRRKAQADRERSYRK 639
Score = 66 (28.3 bits), Expect = 2.9e-18, Sum P(3) = 2.9e-18
Identities = 41/203 (20%), Positives = 85/203 (41%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESAN--VGSDWTWDQALRAIINDRRYG 481
+++ + + E++H A ++ A +A ++ L+ + S TWDQ + Y
Sbjct: 488 QRIQEKALRRNEEEKHAADRHQRRAIDALRSRLKRLEPPLRSTDTWDQVKPTLERYDEYK 547
Query: 482 ALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTM 541
AL + R+ AF++ + + K+++ + R + RD + + R ++
Sbjct: 548 ALESDELRQIAFDKVIRRLKEKEEDAER---DRERDRDRGSRRDHHHDRDRDRDYRS--- 601
Query: 542 FENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
+ + R A R + + + +R KAQ +R+R+ YRK ++
Sbjct: 602 YRGERRGPASRHSRTPEP-------DAYEADRRKAQADRERS---YRKAASGLSPVRE-- 649
Query: 602 QWRKVQDRLEADERCSRLDKMDR 624
+W D + D R D+ DR
Sbjct: 650 RW----DERDRDRERDR-DRRDR 667
Score = 65 (27.9 bits), Expect = 3.1e-58, Sum P(3) = 3.1e-58
Identities = 28/90 (31%), Positives = 35/90 (38%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSK-NPHRHNSDRKKPRRLA 955
D HD + D RS + + RH + D E DR K R S RK L+
Sbjct: 588 DHHHDRDRDRDY-RSYRGERRGPASRHSRTPEP-DAYEADRRKAQADRERSYRKAASGLS 645
Query: 956 STPESENESRHKRHR-RDNRNGSRKNGDHE 984
E +E R R RD R+ R D E
Sbjct: 646 PVRERWDERDRDRERDRDRRDRDRDR-DRE 674
Score = 65 (27.9 bits), Expect = 3.2e-16, Sum P(3) = 3.2e-16
Identities = 29/108 (26%), Positives = 50/108 (46%)
Query: 477 DRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTR-- 534
DR Y + R GER+ + + + + DA E +KA+ D ++ ++ S R
Sbjct: 596 DRDYRSYR--GERRGPASRH-SRTPEPDAYEA--DRRKAQADRERSYRKAASGLSPVRER 650
Query: 535 WSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKR 582
W + E D + +R+RDR + L ++ER +EER+R
Sbjct: 651 WDERDRDRERDRDRRDRDRDRDR-ERSTRSLSHY-ERERRDREEERER 696
Score = 63 (27.2 bits), Expect = 4.9e-58, Sum P(3) = 4.9e-58
Identities = 17/56 (30%), Positives = 25/56 (44%)
Query: 916 DKKHRKRHQSAHDSLDENEKDR---SKNPHRHNSDRKKPRRLASTPESENESRHKR 968
DK R+ + D+ + E+DR S+ H H+ DR + R SRH R
Sbjct: 560 DKVIRRLKEKEEDAERDRERDRDRGSRRDHHHDRDRDRDYRSYRGERRGPASRHSR 615
Score = 58 (25.5 bits), Expect = 1.6e-57, Sum P(3) = 1.6e-57
Identities = 20/89 (22%), Positives = 33/89 (37%)
Query: 899 DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTP 958
+ D E D R +D D+ R+R + + +DR + R R PR
Sbjct: 653 ERDRDRERDRDRRDRDRDRD-RERSTRSLSHYERERRDREEERERLYRTRGDPRGSRDEL 711
Query: 959 ESENESRHKRHRR-DNRNGSRKNGDHEDL 986
+ +SR N R++ D E +
Sbjct: 712 DYGGDSRSATGATASNERRRRRDSDTESV 740
Score = 56 (24.8 bits), Expect = 2.4e-21, Sum P(3) = 2.4e-21
Identities = 47/187 (25%), Positives = 78/187 (41%)
Query: 412 VTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQAL 471
V EE R ++RG + +D L+ ++ F +K + F +++ S + + L
Sbjct: 431 VEEEER--SLRGPR-NDVLD--VLDDNRFDVTSKTTFEE-FNSVVSSDRRTAKID-PEIL 483
Query: 472 RAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLK-----LKKAR--DDYKKMLE 524
+ I + ALR E K A + + Q++ DA RLK L+ D K LE
Sbjct: 484 QVIFQRIQEKALRRNEEEKHAADRH--QRRAIDALRSRLKRLEPPLRSTDTWDQVKPTLE 541
Query: 525 --------ESVELTSSTRWSKAVTMFENDERF--KALERERDRKDMFDDHLDELKQKERA 574
ES EL + K + + E + ER+RDR D H D + ++
Sbjct: 542 RYDEYKALESDELRQIA-FDKVIRRLKEKEEDAERDRERDRDRGSRRDHHHDRDRDRDYR 600
Query: 575 KAQEERK 581
+ ER+
Sbjct: 601 SYRGERR 607
Score = 50 (22.7 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 959 ESENESRHKRHRRDNRNGSRKNGDHE---DLEDGEYGGESR 996
E E ++ R R D GSR++ H+ D + Y GE R
Sbjct: 568 EKEEDAERDRER-DRDRGSRRDHHHDRDRDRDYRSYRGERR 607
Score = 50 (22.7 bits), Expect = 1.1e-56, Sum P(3) = 1.1e-56
Identities = 15/62 (24%), Positives = 22/62 (35%)
Query: 899 DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTP 958
D D + +G + R+R S +S+ R + R RK R TP
Sbjct: 709 DELDYGGDSRSATGATASNERRRRRDSDTESVASRSTKRYRRDSRDRDARKDRERRERTP 768
Query: 959 ES 960
S
Sbjct: 769 TS 770
Score = 40 (19.1 bits), Expect = 1.1e-19, Sum P(3) = 1.1e-19
Identities = 30/155 (19%), Positives = 61/155 (39%)
Query: 474 IINDRRYGAL-RTLGERKTAFNEYLGQKK---KQDAEERRLKLKKARDDYKKMLEESVEL 529
+++D R+ +T E FN + + K D E ++ ++ ++ + EE
Sbjct: 448 VLDDNRFDVTSKTTFEE---FNSVVSSDRRTAKIDPEILQVIFQRIQEKALRRNEEEKH- 503
Query: 530 TSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRK 589
+ +A+ + R K LE D +D L++ + KA E + I + K
Sbjct: 504 AADRHQRRAIDALRS--RLKRLEPPLRSTDTWDQVKPTLERYDEYKALESDELRQIAFDK 561
Query: 590 FLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
+ + + + + +DR R D+ DR
Sbjct: 562 VIRRLKEKEEDAERDRERDRDRGSRRDHHHDR-DR 595
Score = 40 (19.1 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 414 EETRKDAVRGEKVSDALEEKTV 435
E T AV G +A EEK V
Sbjct: 765 ERTPTSAVPGPAADEAKEEKAV 786
>FB|FBgn0031492 [details] [associations]
symbol:CG3542 species:7227 "Drosophila melanogaster"
[GO:0017058 "FH1 domain binding" evidence=ISS] [GO:0005685 "U1
snRNP" evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 EMBL:AE014134 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0071011 GO:GO:0000398 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GO:GO:0005685 KO:K12821 OMA:SHERPSQ InterPro:IPR027237
PANTHER:PTHR11864:SF0 HSSP:Q61051 GeneTree:ENSGT00530000062987
UniGene:Dm.4165 GeneID:33513 KEGG:dme:Dmel_CG3542
FlyBase:FBgn0031492 GenomeRNAi:33513 NextBio:783971 EMBL:AY058551
RefSeq:NP_608738.1 SMR:Q9VQK5 IntAct:Q9VQK5 STRING:Q9VQK5
EnsemblMetazoa:FBtr0077648 UCSC:CG3542-RA InParanoid:Q9VQK5
Uniprot:Q9VQK5
Length = 806
Score = 423 (154.0 bits), Expect = 4.1e-56, Sum P(4) = 4.1e-56
Identities = 107/338 (31%), Positives = 171/338 (50%)
Query: 442 YANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK 501
+ +K EA +FK LL NV S+ WDQ ++ I D RY A + L ERK FN Y QK
Sbjct: 226 FKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQKI 285
Query: 502 KQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMF 561
K + EE RLK KKA++D ++ L S ++ S ++ + +F + A+ E DR+D++
Sbjct: 286 KDEREESRLKAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWTAVP-EPDRRDIY 344
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRL------EADER 615
+D + L ++E+ +A+ +KRN+ + LES I T W + Q L + D
Sbjct: 345 EDCIFNLAKREKEEARLLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDNVAFKNDVT 404
Query: 616 CSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLT 675
+DK D L +F + +RKNRD F L+++ G LT
Sbjct: 405 LLGMDKEDALIVFEEHIRTLEKEEDEEREREKKRMKRQQRKNRDSFLALLDSLHEEGKLT 464
Query: 676 AKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRK 735
+ + W + + + A+ SGSTP DLF+ VE L+ +F ++K I++ +K +
Sbjct: 465 SMSLWVELYPIISADLRFSAMLGQ-SGSTPLDLFKFYVENLKARFHDEKKIIREILKEKA 523
Query: 736 ITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLL 773
+ + +FEDF V ED S + N+KL ++ LL
Sbjct: 524 FVVQAKTSFEDFATVVCEDKRSASLDAGNVKLTYNSLL 561
Score = 194 (73.4 bits), Expect = 4.1e-56, Sum P(4) = 4.1e-56
Identities = 36/85 (42%), Positives = 52/85 (61%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T+W EH + DGR YY+N+ T+ S+W+KP LMT E WKE+ S G+ YY+N
Sbjct: 54 TEWTEHKAPDGRPYYYNQNTKQSSWEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVA 113
Query: 258 TKQSKWSLPDEL--KLAREQAEKAS 280
TK++ W P E A+ +AE+A+
Sbjct: 114 TKETCWEPPPEYVDMKAKAKAEEAA 138
Score = 117 (46.2 bits), Expect = 4.0e-48, Sum P(4) = 4.0e-48
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 225 PFELMTTIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLARE 274
P EL ST+W E +PDGR YYYN+ TKQS W P+ L E
Sbjct: 40 PPELAAAFGVMATSTEWTEHKAPDGRPYYYNQNTKQSSWEKPEALMTPAE 89
Score = 107 (42.7 bits), Expect = 9.3e-21, Sum P(4) = 9.3e-21
Identities = 27/131 (20%), Positives = 63/131 (48%)
Query: 501 KKQDAEERRLKLKKARD---DYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR 557
KK D E + K R+ +K++L + + S+ W + V + D R+ A + +R
Sbjct: 215 KKDDKSESAVVFKDKREAIESFKELLRDR-NVPSNANWDQCVKIISKDPRYAAFKNLNER 273
Query: 558 KDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCS 617
K F+ + + + ER +++ + K+ + +FL S D + + ++ + ++ +
Sbjct: 274 KQTFNAYKTQKIKDEREESRLKAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWT 333
Query: 618 RLDKMDRLEIF 628
+ + DR +I+
Sbjct: 334 AVPEPDRRDIY 344
Score = 83 (34.3 bits), Expect = 4.1e-56, Sum P(4) = 4.1e-56
Identities = 25/86 (29%), Positives = 40/86 (46%)
Query: 899 DHDDSAENDSKRSGKDN-DKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLAS 956
+ +D+ + RS K +KKH+KR +S S ENE + K+ R + R
Sbjct: 633 ESEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEVEKSKRRRSKTRSHSLTSIG 692
Query: 957 TPESENESRHKRHRRDNRNGSRKNGD 982
+ ESE + K+ R++ GS D
Sbjct: 693 SIESEKLLKKKKKRKNKLRGSSCESD 718
Score = 75 (31.5 bits), Expect = 8.8e-44, Sum P(4) = 8.8e-44
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 197 QTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADA 237
Q WKE+ S G+ YY N T+ + W+ P E + +A A
Sbjct: 94 QCPWKEYRSDTGKVYYHNVATKETCWEPPPEYVDMKAKAKA 134
Score = 66 (28.3 bits), Expect = 1.3e-16, Sum P(4) = 1.3e-16
Identities = 40/208 (19%), Positives = 85/208 (40%)
Query: 652 KTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFED 711
K +R+ + F++L+ D + + NW D C+K+ P A N + K F
Sbjct: 227 KDKREAIESFKELLR-D---RNVPSNANW-DQCVKIISKDPRYAAFKNLNER--KQTFNA 279
Query: 712 V-VEELQKQFQEDKTRIKDAVK-LRKITLSSTWTFEDFKASVLEDA-----TSPPISDVN 764
++++ + +E + + K A + L + +SS K E+ T + + +
Sbjct: 280 YKTQKIKDEREESRLKAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWTAVPEPD 339
Query: 765 LKLIFDDLLIXXXXXXXXXXXXXXXXXXXFF-DLLCSVKEISATSTWENCRQLLEGSQEF 823
+ I++D + +LL S+ I+ +TW + +L + F
Sbjct: 340 RRDIYEDCIFNLAKREKEEARLLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDNVAF 399
Query: 824 SS----IG-DESICRGVFDEFVTQLKEQ 846
+ +G D+ VF+E + L+++
Sbjct: 400 KNDVTLLGMDKEDALIVFEEHIRTLEKE 427
Score = 54 (24.1 bits), Expect = 2.6e-12, Sum P(4) = 2.6e-12
Identities = 21/89 (23%), Positives = 45/89 (50%)
Query: 507 ERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLD 566
E+ + ++K +D+ K E++ S R K+ + +++ K R R D+ ++H++
Sbjct: 618 EKEIGVEKIWEDFVKESEDACSHHHS-RSRKS----KKNKKHKKRVRSVSRSDIENEHIE 672
Query: 567 -ELKQKERAKAQEERKRNI--IEYRKFLE 592
E ++ R+K + +I IE K L+
Sbjct: 673 VEKSKRRRSKTRSHSLTSIGSIESEKLLK 701
Score = 52 (23.4 bits), Expect = 6.7e-53, Sum P(4) = 6.7e-53
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPH-----RHNSDRKKPRRLASTPESENESRHKRHRR 971
KK +KR S E++ ++P +++S+ P + + + + KRH R
Sbjct: 701 KKKKKRKNKLRGSSCESDVPGIQSPGTQALLQNDSNSHSPAK--KKKKEKRAKKDKRHNR 758
Query: 972 DNRNGS 977
NR+G+
Sbjct: 759 HNRSGT 764
Score = 47 (21.6 bits), Expect = 1.1e-17, Sum P(5) = 1.1e-17
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEK 935
+ + D+ E + KR K +K+R + DSL E K
Sbjct: 425 EKEEDEEREREKKRM-KRQQRKNRDSFLALLDSLHEEGK 462
Score = 45 (20.9 bits), Expect = 1.7e-14, Sum P(4) = 1.7e-14
Identities = 8/56 (14%), Positives = 29/56 (51%)
Query: 795 FDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQ-LKEQAKD 849
F L + + + + W+ C +++ +++ + + + F+ + TQ +K++ ++
Sbjct: 236 FKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQKIKDEREE 291
Score = 44 (20.5 bits), Expect = 4.6e-52, Sum P(4) = 4.6e-52
Identities = 8/28 (28%), Positives = 18/28 (64%)
Query: 960 SENESRHKRHRRDNRNGSRKNGDHEDLE 987
S ++K+H++ R+ SR + ++E +E
Sbjct: 645 SRKSKKNKKHKKRVRSVSRSDIENEHIE 672
Score = 44 (20.5 bits), Expect = 2.2e-17, Sum P(5) = 2.2e-17
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPHRHNSD 947
++H + + D E EK R K R N D
Sbjct: 418 EEHIRTLEKEEDEEREREKKRMKRQQRKNRD 448
Score = 42 (19.8 bits), Expect = 7.4e-52, Sum P(4) = 7.4e-52
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQS 925
DS+ A+ K DK+H + ++S
Sbjct: 734 DSNSHSPAKKKKKEKRAKKDKRHNRHNRS 762
Score = 40 (19.1 bits), Expect = 1.2e-51, Sum P(4) = 1.2e-51
Identities = 15/59 (25%), Positives = 21/59 (35%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENE 963
+NDS KK KR + KD+ N H + P + + S NE
Sbjct: 732 QNDSNSHSPAKKKKKEKRAK----------KDKRHNRHNRSGTPLSPAQSVESSGSRNE 780
Score = 40 (19.1 bits), Expect = 2.1e-16, Sum P(4) = 2.1e-16
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 957 TPESENESRHKRHRRDNRNGSRKNGD 982
T E E + +R ++ + RKN D
Sbjct: 423 TLEKEEDEEREREKKRMKRQQRKNRD 448
Score = 40 (19.1 bits), Expect = 5.3e-14, Sum P(4) = 5.3e-14
Identities = 38/216 (17%), Positives = 88/216 (40%)
Query: 362 KTVDAIAPMIDVSSSIGEAVT-DNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDA 420
+ + + +++ +SI A T +N++ + L+G + V EE +
Sbjct: 365 RNMKVLGELLESMTSINHATTWSEAQVMLLDNVAFKNDVTLLGMDKEDALIVFEEHIRTL 424
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
+ E E+K ++++ + A +L E + S W + I D R+
Sbjct: 425 EKEEDEEREREKKRMKRQQRKNRDSFLA--LLDSLHEEGKLTSMSLWVELYPIISADLRF 482
Query: 481 GALRTLGERKTA----FNEYLGQKKKQDAEERRL------------KLKKARDDYKKMLE 524
A+ LG+ + F Y+ K + +E+++ + K + +D+ ++
Sbjct: 483 SAM--LGQSGSTPLDLFKFYVENLKARFHDEKKIIREILKEKAFVVQAKTSFEDFATVVC 540
Query: 525 ESVELTSSTRWSKAVTMFENDERFKALERERDRKDM 560
E S + +T E+ +A+E+ER ++++
Sbjct: 541 EDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEV 576
Score = 39 (18.8 bits), Expect = 1.5e-51, Sum P(4) = 1.5e-51
Identities = 7/24 (29%), Positives = 14/24 (58%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRH 923
+D ++ + +K+ K+ K KRH
Sbjct: 733 NDSNSHSPAKKKKKEKRAKKDKRH 756
Score = 39 (18.8 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
Identities = 35/187 (18%), Positives = 74/187 (39%)
Query: 414 EETRK-DAVRGEKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQAL 471
EE R+ + E ++ LE E + A KL E AF AL E +G + W+ +
Sbjct: 574 EEVRRLRKLENEIKNEWLEANVSVAEPYESAKKLVEHLEAF-ALYEK-EIGVEKIWEDFV 631
Query: 472 RAIINDRRYGALRTLGERKTA-FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELT 530
+ + + R+ +K + + + D E ++++K++ K S+
Sbjct: 632 KESEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEVEKSKRRRSKTRSHSLTSI 691
Query: 531 SSTRWSKAVTMFENDE-RFKALERERD-------------RKDMFDDHLDELKQKERAKA 576
S K + + + + + E D + D + H K+K+ +A
Sbjct: 692 GSIESEKLLKKKKKRKNKLRGSSCESDVPGIQSPGTQALLQNDS-NSHSPAKKKKKEKRA 750
Query: 577 QEERKRN 583
+++++ N
Sbjct: 751 KKDKRHN 757
Score = 37 (18.1 bits), Expect = 4.1e-56, Sum P(4) = 4.1e-56
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 19 PPMVGSMDPPRGQG 32
PP VG+ P G+G
Sbjct: 4 PPSVGNGGAPPGRG 17
>UNIPROTKB|Q6NWY9 [details] [associations]
symbol:PRPF40B "Pre-mRNA-processing factor 40 homolog B"
species:9606 "Homo sapiens" [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 EMBL:CH471111 Gene3D:2.20.70.10
SUPFAM:SSF51045 Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 SUPFAM:SSF81698 HSSP:O75400 KO:K12821 eggNOG:COG5104
HOVERGEN:HBG059634 EMBL:AK027117 EMBL:AK123353 EMBL:AL137459
EMBL:AL834216 EMBL:BC050398 EMBL:BC067364 EMBL:AF049525
IPI:IPI00446681 IPI:IPI00465345 IPI:IPI00646529 IPI:IPI00789604
PIR:T46402 RefSeq:NP_001026868.2 UniGene:Hs.706827
ProteinModelPortal:Q6NWY9 SMR:Q6NWY9 STRING:Q6NWY9
PhosphoSite:Q6NWY9 DMDM:74736936 PaxDb:Q6NWY9 PRIDE:Q6NWY9
Ensembl:ENST00000261897 Ensembl:ENST00000380281 GeneID:25766
KEGG:hsa:25766 UCSC:uc001rup.1 UCSC:uc001ruq.1 UCSC:uc001rur.1
CTD:25766 GeneCards:GC12P049963 HGNC:HGNC:25031 HPA:HPA038426
HPA:HPA038599 neXtProt:NX_Q6NWY9 PharmGKB:PA143485582
InParanoid:Q6NWY9 OMA:QQLEEGP ChiTaRS:PRPF40B GenomeRNAi:25766
NextBio:46887 ArrayExpress:Q6NWY9 Bgee:Q6NWY9 CleanEx:HS_PRPF40B
Genevestigator:Q6NWY9 Uniprot:Q6NWY9
Length = 871
Score = 457 (165.9 bits), Expect = 5.4e-56, Sum P(3) = 5.4e-56
Identities = 128/431 (29%), Positives = 203/431 (47%)
Query: 431 EEKTVEQEH--FAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGE 488
EE E E +++N+ +AK AFK LL V S+ +W+QA++ ++ D RY AL L E
Sbjct: 260 EESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSE 319
Query: 489 RKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERF 548
+K AFN Y Q++K++ EE RL+ K+A+ + LE+ +TS+TR+ +A F E +
Sbjct: 320 KKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTFGELEVW 379
Query: 549 KALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQD 608
A+ ERDRK+++DD L L +KE+ +A++ R+RNI + L+ + T W + Q
Sbjct: 380 -AVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQ 438
Query: 609 RL------EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFR 662
L D + +DK D L F + +RKNR+ F+
Sbjct: 439 YLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQ 498
Query: 663 KLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQE 722
++ G L + + W + V + + GSTP DLF+ VEEL+ +F +
Sbjct: 499 TFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQP-GSTPLDLFKFYVEELKARFHD 557
Query: 723 DKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXXXX 782
+K IKD +K R + FEDF + D + + N+KL F+ LL
Sbjct: 558 EKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARERE 617
Query: 783 XXXXXXXXX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFD 837
F +L +V + + WE R+ F I ES +F
Sbjct: 618 REKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFR 677
Query: 838 EFVTQLKEQAK 848
EF+ Q+ EQ +
Sbjct: 678 EFL-QVLEQTE 687
Score = 179 (68.1 bits), Expect = 5.4e-56, Sum P(3) = 5.4e-56
Identities = 34/93 (36%), Positives = 49/93 (52%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
W EH + DGR YY+N + S W+KP L + E + WKE+ S G+ YYYN +K
Sbjct: 98 WSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSK 157
Query: 260 QSKWSLPDELKLAREQAEKASIKGTQSETSPNS 292
+S+W+ P +L E K G Q + P +
Sbjct: 158 ESRWTRPKDLD-DLEVLVKQEAAGKQQQQLPQT 189
Score = 82 (33.9 bits), Expect = 7.2e-46, Sum P(3) = 7.2e-46
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 197 QTDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
Q WKE+ S G+ YY+N +++ S W +P +L
Sbjct: 136 QCPWKEYKSDTGKPYYYNNQSKESRWTRPKDL 167
Score = 60 (26.2 bits), Expect = 5.4e-56, Sum P(3) = 5.4e-56
Identities = 23/104 (22%), Positives = 46/104 (44%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
+++ ++S + S+ DS SG + S+H ++ ++K P + KK
Sbjct: 735 RRNPSESGSEPSSSLDSVESG--GAALGGRGSPSSHLLGADHGLRKAKKPKKKT---KKR 789
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
R +++PESE + K + + ++ D E L+ E S
Sbjct: 790 RHKSNSPESETDPEEKAGKESDEKEQEQDKDRE-LQQAELPNRS 832
Score = 56 (24.8 bits), Expect = 1.4e-55, Sum P(3) = 1.4e-55
Identities = 21/83 (25%), Positives = 43/83 (51%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRK 949
+KK S+ +S + +++GK++D+K +++ + + E +++ P+R K
Sbjct: 786 TKKRRHKSNSPESETDPEEKAGKESDEKEQEQDK-------DRELQQAELPNRSPGFGIK 838
Query: 950 KPRRLASTPESE-NESRHKRHRR 971
K + T ESE +E +R RR
Sbjct: 839 KEKTGWDTSESELSEGELERRRR 861
Score = 55 (24.4 bits), Expect = 1.8e-55, Sum P(3) = 1.8e-55
Identities = 17/58 (29%), Positives = 24/58 (41%)
Query: 909 KRSGKDNDKKHRKRHQSAHDSLDENEK--DRSKNPHRHNSDRKKPRRLASTPESENES 964
++ G+ K H KR S S E E+ S P + R+ P S P S +S
Sbjct: 696 RKHGRKGKKHHHKRSHSPSGSESEEEELPPPSLRPPKRR--RRNPSESGSEPSSSLDS 751
Score = 51 (23.0 bits), Expect = 1.9e-11, Sum P(3) = 1.9e-11
Identities = 18/85 (21%), Positives = 36/85 (42%)
Query: 432 EKTVEQEHFAYANKLEAKNAFKALLESANVGSDW--TWDQALRAIINDRRYGALRTLGER 489
E+ E+E + EA AF+++L A + W++ + D + + ER
Sbjct: 615 EREREKEEARRMRRREA--AFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESER 672
Query: 490 KTAFNEYLGQKKKQDAEERRLKLKK 514
F E+L ++ + + K +K
Sbjct: 673 IRLFREFLQVLEQTECQHLHTKGRK 697
Score = 46 (21.3 bits), Expect = 1.6e-54, Sum P(3) = 1.6e-54
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 912 GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
G+ + +K +K H S +E + + P K+ RR S SE S
Sbjct: 695 GRKHGRKGKKHHHKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSS 747
Score = 46 (21.3 bits), Expect = 6.2e-11, Sum P(3) = 6.2e-11
Identities = 10/55 (18%), Positives = 27/55 (49%)
Query: 795 FDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAKD 849
F L K + + ++WE +++ +S++ S + F+ + Q +++ K+
Sbjct: 283 FKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKE 337
Score = 44 (20.5 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 21/91 (23%), Positives = 43/91 (47%)
Query: 431 EEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALR-AIINDRRYGALRTLGER 489
++KT ++ H + + + E KA ES + D+ L+ A + +R G + +
Sbjct: 783 KKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDRELQQAELPNRSPGF--GIKKE 840
Query: 490 KTAFNEYLGQKKKQDAEERRLKLKKARDDYK 520
KT ++ + + + E RR L + DD++
Sbjct: 841 KTGWDTSESELSEGELERRRRTLLQQLDDHQ 871
Score = 39 (18.8 bits), Expect = 8.4e-54, Sum P(3) = 8.4e-54
Identities = 12/58 (20%), Positives = 23/58 (39%)
Query: 932 ENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
+ +K K H + + L P S + +R R + +GS + + +E G
Sbjct: 701 KGKKHHHKRSHSPSGSESEEEELP--PPSLRPPKRRR-RNPSESGSEPSSSLDSVESG 755
Score = 39 (18.8 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 543 ENDERFKALERERDRKDMFDDHLDELKQKE 572
E D KA +E D K+ D EL+Q E
Sbjct: 799 ETDPEEKA-GKESDEKEQEQDKDRELQQAE 827
Score = 38 (18.4 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 959 ESENESRHKRHRRDNRNGSRKN 980
E E E +R R R RKN
Sbjct: 472 EREEEEERERARLRERRQQRKN 493
>UNIPROTKB|F1NQH4 [details] [associations]
symbol:PRPF40A "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0016477 "cell
migration" evidence=IEA] [GO:0032465 "regulation of cytokinesis"
evidence=IEA] [GO:0070064 "proline-rich region binding"
evidence=IEA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0007010 GO:GO:0016477
GO:GO:0008360 GO:GO:0016363 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0032465 Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 SUPFAM:SSF81698 OMA:SHERPSQ
GeneTree:ENSGT00530000062987 EMBL:AADN02017035 EMBL:AADN02017036
IPI:IPI00822687 Ensembl:ENSGALT00000037747 ArrayExpress:F1NQH4
Uniprot:F1NQH4
Length = 1076
Score = 593 (213.8 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 200/786 (25%), Positives = 320/786 (40%)
Query: 233 ERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQA-EKASIKGTQSETS-P 290
E + + W E SPDGR YYYN TKQS W PD+LK EQ K K +S++ P
Sbjct: 300 EHSKQKSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 359
Query: 291 ---NSQTSISFPSSVVKAPSSADIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXX 347
NSQT S + + + A
Sbjct: 360 YYYNSQTKESRWAKPKELEDLEALIKAEENSTKTEESASATSAAADAANTAATATAAAEA 419
Query: 348 XXXXXXXANADGFPKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDK 407
A +T A A + + S++ A A + SA A+D
Sbjct: 420 ATAGTASTAAASDAETTAASAVVENESAAAATAEDQGQQATSAPAAQEQSAESAANAADD 479
Query: 408 VPPPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTW 467
++ DA + E DA K + + K EAK AFK LL+ V S+ +W
Sbjct: 480 SK----QDGSADASKKEG-DDAQPVKKT----YTWNTKEEAKQAFKELLKEKRVPSNASW 530
Query: 468 DQALRAIINDRRY---GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLE 524
+QA++ IIND RY AL L E+K AFN Y Q +K++ EE R K K+A++ +++ LE
Sbjct: 531 EQAMKMIINDPRYRIRSALAKLSEKKQAFNAYKVQTEKEEKEEARSKYKEAKESFQRFLE 590
Query: 525 ESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNI 584
++TS+TR+ KA MF E + A+ ERDR ++++D L L +KE+ +A++ RKRN
Sbjct: 591 NHEKMTSTTRYKKAEQMFGEMEVWNAIS-ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNW 649
Query: 585 IEYRKFLESCDFIKANTQWRKVQDRL------EADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ L++ + T W + Q L DE +DK D L F
Sbjct: 650 EALKNILDNMANVTYCTTWSEAQQYLMDNPTFAEDEELQNMDKEDALICFEEHIRALEKE 709
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ +RKNR+ F+ ++ G L + ++W + + + +
Sbjct: 710 EEEEKQKSLLRERRRQRKNRESFQIFLDELHEHGQLHSMSSWMELYPTISSDIRFTNMLG 769
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLEDATSP 758
GST DLF+ VE+L+ ++ ++K IKD +K + + +FEDF + +
Sbjct: 770 QP-GSTALDLFKFYVEDLKARYHDEKKIIKDILKDKGFVVEVNTSFEDFVTVISSTKRAT 828
Query: 759 PISDVNLKLIFDDLLIXXXXXXXXXXXXXXXXX----XXFFDLLC-SVKEISATSTWENC 813
+ N+KL F+ LL F +L + I + WE+
Sbjct: 829 TLDAGNIKLAFNSLLEKAEAREREREKEEARKMKRKESAFKSMLKQATPPIELDAVWEDI 888
Query: 814 RQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAKDYXXXXXXXXXXXXXXXXXXXXXXX 873
R F I ES + +F +F+ L+ + + +
Sbjct: 889 RDRFVKEPAFEDITLESERKRIFKDFMHVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRS 948
Query: 874 XQGXXXXXXXXXXXXXHSKKDGADSDHDDSAENDS--KRSGKDNDKKHRKRHQSAHDSLD 931
S+ A S+ SAE++ K+S K K ++RH+S D
Sbjct: 949 GSESEDDDSHSKKKRQRSESRSA-SERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESD 1007
Query: 932 -ENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
E EKD+ + DR + R ES+++S K+ R ++ + +L +GE
Sbjct: 1008 IEREKDKKERERESEKDRARQRS-----ESKHKSPTKK--RPGKDSGNWDTSGSELSEGE 1060
Query: 991 YGGESR 996
+ R
Sbjct: 1061 LEKQRR 1066
Score = 224 (83.9 bits), Expect = 5.2e-13, Sum P(2) = 5.2e-13
Identities = 46/113 (40%), Positives = 67/113 (59%)
Query: 197 QTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNK 256
++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+ YYYN
Sbjct: 305 KSTWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNS 364
Query: 257 VTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA 309
TK+S+W+ P EL+ E KA T++E S S TS + ++ A ++A
Sbjct: 365 QTKESRWAKPKELE-DLEALIKAEENSTKTEESA-SATSAAADAANTAATATA 415
Score = 37 (18.1 bits), Expect = 1.2e-55, Sum P(2) = 1.2e-55
Identities = 9/18 (50%), Positives = 9/18 (50%)
Query: 13 AQVPHQPPMVGSMDPPRG 30
A P PP V SMD G
Sbjct: 254 AMQPTVPPGVNSMDAQLG 271
>MGI|MGI:1925583 [details] [associations]
symbol:Prpf40b "PRP40 pre-mRNA processing factor 40 homolog
B (yeast)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008380 "RNA splicing" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 MGI:MGI:1925583 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
HSSP:O75400 KO:K12821 eggNOG:COG5104 HOVERGEN:HBG059634
GeneTree:ENSGT00530000062987 HOGENOM:HOG000231802 CTD:25766
ChiTaRS:PRPF40B EMBL:AF135440 EMBL:AK019183 EMBL:AK140075
EMBL:BC051961 EMBL:BC082994 IPI:IPI00377927 IPI:IPI00875105
IPI:IPI00876460 RefSeq:NP_061256.1 UniGene:Mm.358668
ProteinModelPortal:Q80W14 SMR:Q80W14 STRING:Q80W14
PhosphoSite:Q80W14 PaxDb:Q80W14 PRIDE:Q80W14
Ensembl:ENSMUST00000145482 GeneID:54614 KEGG:mmu:54614
UCSC:uc007xpg.1 UCSC:uc007xph.1 NextBio:311428 Bgee:Q80W14
Genevestigator:Q80W14 Uniprot:Q80W14
Length = 870
Score = 458 (166.3 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 124/424 (29%), Positives = 201/424 (47%)
Query: 436 EQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNE 495
E+ +++N+ +AK AFK LL V S+ +W+QA++ ++ D RY AL L E+K AFN
Sbjct: 267 ERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNA 326
Query: 496 YLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERER 555
Y Q++K++ EE RL+ K+A+ + LE+ +TS+TR+ +A F D A+ ER
Sbjct: 327 YKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRYRRAEQTF-GDLEVWAVVPER 385
Query: 556 DRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRL----- 610
+RK+++DD L L +KE+ +A++ R+RNI + L+ + T W + Q L
Sbjct: 386 ERKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPS 445
Query: 611 -EADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADV 669
D++ +DK D L F + +RKNR+ F+ ++
Sbjct: 446 FAQDQQLQNMDKEDALICFEEHIRALEREEEEERERARLRERRQQRKNREAFQSFLDELH 505
Query: 670 ALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKD 729
G L + + W + V + + GSTP DLF+ VEEL+ +F ++K IKD
Sbjct: 506 ETGQLHSMSTWMELYPAVSTDVRFANMLGQP-GSTPLDLFKFYVEELKARFHDEKKIIKD 564
Query: 730 AVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXXXXXXXXXXX 789
+K R + FEDF + D + + N+KL F+ LL
Sbjct: 565 ILKDRGFCVEVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEARETEREKEEAR 624
Query: 790 XX----XXFFDLLC-SVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLK 844
F +L +V + + WE R+ F I ES +F EF+ Q+
Sbjct: 625 RMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERIRLFREFL-QVL 683
Query: 845 EQAK 848
EQ +
Sbjct: 684 EQTE 687
Score = 172 (65.6 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 34/89 (38%), Positives = 51/89 (57%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
W EH + DGR YY+N + S W+KP L + E + WKE+ S G+ YYYN ++
Sbjct: 98 WSEHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSQ 157
Query: 260 QSKWSLP---DELKLAREQAEKASIKGTQ 285
+S+W+ P D+L+ +Q E A + TQ
Sbjct: 158 ESRWTRPKDLDDLEALVKQ-ESAGKQQTQ 185
Score = 104 (41.7 bits), Expect = 4.4e-16, Sum P(3) = 4.4e-16
Identities = 51/229 (22%), Positives = 102/229 (44%)
Query: 410 PPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQ 469
P ++E +K A K EEK E+ A EAK + LE + T +
Sbjct: 315 PKLSE--KKQAFNAYKAQREKEEK--EE---ARLRAKEAKQTLQHFLEQHERMTSTTRYR 367
Query: 470 ALRAIINDRRYGALRTLGERKTAFNE---YLGQKKKQDAEERRLKLKKARDDYKKMLEES 526
D A+ ERK +++ +L +K+K+ A++ R + +A K +L+
Sbjct: 368 RAEQTFGDLEVWAVVPERERKEVYDDVLFFLAKKEKEQAKQLRRRNIQA---LKSILDGM 424
Query: 527 VELTSSTRWSKAVTM------FENDERFKALERERDRKDMFDDHL-----DELKQKERAK 575
+ T WS+A F D++ + +++E D F++H+ +E +++ERA+
Sbjct: 425 SSVNFQTTWSQAQQYLMDNPSFAQDQQLQNMDKE-DALICFEEHIRALEREEEEERERAR 483
Query: 576 AQEER--KRNIIEYRKFLESCDF---IKANTQWRKVQDRLEADERCSRL 619
+E R ++N ++ FL+ + + + W ++ + D R + +
Sbjct: 484 LRERRQQRKNREAFQSFLDELHETGQLHSMSTWMELYPAVSTDVRFANM 532
Score = 81 (33.6 bits), Expect = 7.0e-46, Sum P(3) = 7.0e-46
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 197 QTDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
Q WKE+ S G+ YY+N +++ S W +P +L
Sbjct: 136 QCPWKEYKSDTGKPYYYNNQSQESRWTRPKDL 167
Score = 60 (26.2 bits), Expect = 2.2e-55, Sum P(3) = 2.2e-55
Identities = 18/58 (31%), Positives = 25/58 (43%)
Query: 909 KRSGKDNDKKHRKR-HQSAHDSLDENE-KDRSKNPHRHNSDRKKPRRLASTPESENES 964
++ G+ K HRKR H + DE E S P + R+ P S P S +S
Sbjct: 696 RKHGRKGKKHHRKRSHSPSGSESDEEELPPPSLRPPKRR--RRNPSESGSEPSSSLDS 751
Score = 52 (23.4 bits), Expect = 1.5e-54, Sum P(3) = 1.5e-54
Identities = 20/67 (29%), Positives = 30/67 (44%)
Query: 895 GADSDHDDSAENDSKRSGKDNDKKHRKR-HQSAH-DS-LDENEKDRSKNPHRHNSDRKKP 951
G+ S H + R K KK +KR H+S DS D +K ++ R ++P
Sbjct: 763 GSPSSHLLLGSDHGLRKTKKPKKKTKKRRHKSTSPDSETDPEDKAGKESEDREQEQDREP 822
Query: 952 RRLASTP 958
R+ A P
Sbjct: 823 RQ-AELP 828
Score = 51 (23.0 bits), Expect = 1.9e-54, Sum P(3) = 1.9e-54
Identities = 15/53 (28%), Positives = 23/53 (43%)
Query: 912 GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
G+ + +K +K H+ S +E D + P K+ RR S SE S
Sbjct: 695 GRKHGRKGKKHHRKRSHSPSGSESDEEELPPPSLRPPKRRRRNPSESGSEPSS 747
Score = 49 (22.3 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 21/93 (22%), Positives = 41/93 (44%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDW--TWDQALRAIINDRRYG 481
EK ++A E + E+E + EA AF+++L A + W++ + D +
Sbjct: 609 EK-AEARETER-EKEEARRMRRREA--AFRSMLRQAVPALELGTAWEEVRERFVCDSAFE 664
Query: 482 ALRTLGERKTAFNEYLGQKKKQDAEERRLKLKK 514
+ ER F E+L ++ + + K +K
Sbjct: 665 QITLESERIRLFREFLQVLEQTECQHLHTKGRK 697
Score = 46 (21.3 bits), Expect = 3.4e-10, Sum P(3) = 3.4e-10
Identities = 10/55 (18%), Positives = 27/55 (49%)
Query: 795 FDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAKD 849
F L K + + ++WE +++ +S++ S + F+ + Q +++ K+
Sbjct: 283 FKELLRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKE 337
Score = 42 (19.8 bits), Expect = 1.7e-53, Sum P(3) = 1.7e-53
Identities = 19/77 (24%), Positives = 35/77 (45%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDR-SKNPHRHNSDRKK 950
+++ ++S + S+ DS SG S+H L + R +K P + KK
Sbjct: 735 RRNPSESGSEPSSSLDSVESG--GAALGGPGSPSSHLLLGSDHGLRKTKKPKKKT---KK 789
Query: 951 PRRLASTPESENESRHK 967
R +++P+SE + K
Sbjct: 790 RRHKSTSPDSETDPEDK 806
Score = 42 (19.8 bits), Expect = 1.7e-53, Sum P(3) = 1.7e-53
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRK 949
+KK S DS + ++GK+++ + +++ + E +++ P+R K
Sbjct: 787 TKKRRHKSTSPDSETDPEDKAGKESEDREQEQ---------DREPRQAELPNRSPGFGIK 837
Query: 950 KPRRLASTPESE-NESRHKRHRR 971
K + T ESE +E +R RR
Sbjct: 838 KEKTGWDTSESELSEGELERRRR 860
Score = 39 (18.8 bits), Expect = 3.4e-53, Sum P(3) = 3.4e-53
Identities = 12/58 (20%), Positives = 24/58 (41%)
Query: 932 ENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
++ + RS +P SD ++ P +R R + +GS + + +E G
Sbjct: 704 KHHRKRSHSPSGSESDEEE------LPPPSLRPPKRRRRNPSESGSEPSSSLDSVESG 755
Score = 38 (18.4 bits), Expect = 5.6e-08, Sum P(3) = 5.6e-08
Identities = 9/22 (40%), Positives = 10/22 (45%)
Query: 959 ESENESRHKRHRRDNRNGSRKN 980
E E E +R R R RKN
Sbjct: 472 EREEEEERERARLRERRQQRKN 493
>WB|WBGene00014218 [details] [associations]
symbol:ZK1098.1b species:6239 "Caenorhabditis elegans"
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0018991 "oviposition" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0018991 GO:GO:0040010
GO:GO:0002119 Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:Z22176
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0
eggNOG:COG5104 OMA:WEKPLEL GeneTree:ENSGT00530000062987 PIR:F88557
PIR:S40923 RefSeq:NP_001255005.1 RefSeq:NP_001255006.1
ProteinModelPortal:P34600 SMR:P34600 PaxDb:P34600 PRIDE:P34600
EnsemblMetazoa:ZK1098.1a GeneID:176343 KEGG:cel:CELE_ZK1098.1
UCSC:ZK1098.1 CTD:176343 WormBase:ZK1098.1a WormBase:ZK1098.1b
HOGENOM:HOG000019151 InParanoid:P34600 NextBio:892164
Uniprot:P34600
Length = 724
Score = 375 (137.1 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 108/406 (26%), Positives = 198/406 (48%)
Query: 379 EAVTDNTVAEAKNNLSNMSASDLVGASD----KVPP-PVTEETRKDAVRGEKVSDALEEK 433
+A T +TVA A + SDL A +P P+ E +++ E V+D +E K
Sbjct: 169 KAATVDTVALAAAVQQKKAESDLDKAMKATLASMPNVPLPSEKKEE----ESVNDEVELK 224
Query: 434 TVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAF 493
+ E F + + + ++ WDQA++ I ND R+ L + E+K F
Sbjct: 225 KRQSERF--------RELLRDKYNDGKITTNCNWDQAVKWIQNDPRFRILNKVSEKKQLF 276
Query: 494 NEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALER 553
N + Q+ K++ +E+RL +KK+++D +K L+E ++ S ++ KA +F + + A+
Sbjct: 277 NAWKVQRGKEERDEKRLAIKKSKEDLEKFLQEHPKMKESLKYQKASDIFSKEPLWIAVND 336
Query: 554 ERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRL-EA 612
E DRK++F D +D + ++++ K +E+RKR+I + L+S + I T W + Q L E
Sbjct: 337 E-DRKEIFRDCIDFVARRDKEKKEEDRKRDIAAFSHVLQSMEQITYKTTWAQAQRILYEN 395
Query: 613 DERCSR-----LDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEA 667
+ R +DK D L +F + +RK R+E+R L+E+
Sbjct: 396 PQFAERKDLHFMDKEDALTVFEDHIKQAEKEHDEEKEQEEKRLRRQQRKVREEYRLLLES 455
Query: 668 DVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRI 727
G LT+ + W + + + GS+P DLF+ VE+L++Q+ ED+ I
Sbjct: 456 LHKRGELTSMSLWTSLFPIISTDTRFELMLFQP-GSSPLDLFKFFVEDLKEQYTEDRRLI 514
Query: 728 KDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLL 773
K+ + + + +T + +F V+ + N+KL ++ L+
Sbjct: 515 KEILTEKGCQVIATTEYREFSDWVVSHEKGGKVDHGNMKLCYNSLI 560
Score = 193 (73.0 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 37/101 (36%), Positives = 60/101 (59%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADAST----DWKEFTSP 247
S+ V++DW HT+ G YY N+ T+ ++W KP L T +ER+ + WKEF S
Sbjct: 76 SSPSVESDWSVHTNEKGTPYYHNRVTKQTSWIKPDVLKTPLERSTSGQPQQGQWKEFMSD 135
Query: 248 DGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSET 288
DG+ YYYN +TK+++W PD ++ + + +K + K +T
Sbjct: 136 DGKPYYYNTLTKKTQWVKPDGEEITKGE-QKPAAKAATVDT 175
Score = 135 (52.6 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
Identities = 45/163 (27%), Positives = 71/163 (43%)
Query: 431 EEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERK 490
E K ++E + K ++ F+ LL+ NV D W I D+ Y A+ ER+
Sbjct: 564 ESKAKDEEKESLRRKRRLESEFRNLLKEHNVDKDSEWTVIKPKIEKDKAYLAMENDDERE 623
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKA 550
TAFN Y A L+ KK + D KK + S + S + E +++ K
Sbjct: 624 TAFNHYKNGTSGTTAGSEILEKKKKKKDKKKKNKRSDNNSESEGEIR-----EKEKKKKK 678
Query: 551 LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLES 593
+ DR D + K ++R+ ++ E R+ E RK ES
Sbjct: 679 KHSKEDRMDDEERGKKSKKSRKRSPSRSESPRHSSEKRKRRES 721
Score = 88 (36.0 bits), Expect = 4.1e-19, Sum P(3) = 4.1e-19
Identities = 44/214 (20%), Positives = 95/214 (44%)
Query: 422 RGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWT----WDQALRAIIND 477
+ EK D EEK E++ + + + ++ LLES + + T W I D
Sbjct: 422 QAEKEHD--EEKEQEEKRLRRQQR-KVREEYRLLLESLHKRGELTSMSLWTSLFPIISTD 478
Query: 478 RRYGAL--RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRW 535
R+ + + F ++ K+Q E+RRL +K+ + E+ ++ ++T +
Sbjct: 479 TRFELMLFQPGSSPLDLFKFFVEDLKEQYTEDRRL-IKEI------LTEKGCQVIATTEY 531
Query: 536 SKAVTMFENDERFKALERERDRKDMFDDHLD--ELKQKERAKAQEERKRNI-IEYRKFLE 592
+ + E+ ++ + K ++ ++ E K K+ K RKR + E+R L+
Sbjct: 532 REFSDWVVSHEKGGKVDHG-NMKLCYNSLIEKAESKAKDEEKESLRRKRRLESEFRNLLK 590
Query: 593 SCDFIKANTQWRKVQDRLEADERCSRLDKMDRLE 626
+ K +++W ++ ++E D+ ++ D E
Sbjct: 591 EHNVDK-DSEWTVIKPKIEKDKAYLAMENDDERE 623
Score = 83 (34.3 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 42/206 (20%), Positives = 83/206 (40%)
Query: 654 ERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFED-V 712
+++ + FR+L+ G +T NW D +K + P + + S K LF
Sbjct: 224 KKRQSERFRELLRDKYNDGKITTNCNW-DQAVKWIQNDPRFRILNKVSEK--KQLFNAWK 280
Query: 713 VEELQKQFQEDKTRIKDAVK-LRKITLSSTWTFEDFKASVLEDATSP-P----ISDVNLK 766
V+ +++ E + IK + + L K E K D S P ++D + K
Sbjct: 281 VQRGKEERDEKRLAIKKSKEDLEKFLQEHPKMKESLKYQKASDIFSKEPLWIAVNDEDRK 340
Query: 767 LIFDDLL-IXXXXXXXXXXXXXXXXXXXFFDLLCSVKEISATSTWENCRQLLEGSQEFSS 825
IF D + F +L S+++I+ +TW +++L + +F+
Sbjct: 341 EIFRDCIDFVARRDKEKKEEDRKRDIAAFSHVLQSMEQITYKTTWAQAQRILYENPQFAE 400
Query: 826 -----IGDESICRGVFDEFVTQLKEQ 846
D+ VF++ + Q +++
Sbjct: 401 RKDLHFMDKEDALTVFEDHIKQAEKE 426
Score = 80 (33.2 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 22/82 (26%), Positives = 39/82 (47%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KKD + ++S+ ++ +KK +K+H S D +D+ E+ + +K
Sbjct: 649 KKDKKKKNKRSDNNSESEGEIREKEKKKKKKH-SKEDRMDDEERGKKS--------KKSR 699
Query: 952 RRLASTPESENESRHKRHRRDN 973
+R S ES S KR RR++
Sbjct: 700 KRSPSRSESPRHSSEKRKRRES 721
Score = 66 (28.3 bits), Expect = 3.8e-49, Sum P(3) = 3.8e-49
Identities = 24/92 (26%), Positives = 39/92 (42%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
END +R N K+ +A + E +K + +KK +R + ESE E
Sbjct: 617 ENDDERETAFNHYKNGTSGTTAGSEILEKKKKKKDK-------KKKNKRSDNNSESEGEI 669
Query: 965 RHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
R K ++ ++ D E E G+ +SR
Sbjct: 670 REKEKKKKKKHSKEDRMDDE--ERGKKSKKSR 699
Score = 51 (23.0 bits), Expect = 1.4e-47, Sum P(3) = 1.4e-47
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRK-RHQSAHDSLDENEKD 936
HSK+D D D+ SK+S K + + RH S E+E D
Sbjct: 680 HSKEDRMD---DEERGKKSKKSRKRSPSRSESPRHSSEKRKRRESEAD 724
Score = 47 (21.6 bits), Expect = 7.2e-15, Sum P(4) = 7.2e-15
Identities = 12/41 (29%), Positives = 23/41 (56%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSL 930
H K+ A+ +HD+ E + KR + +K R+ ++ +SL
Sbjct: 419 HIKQ--AEKEHDEEKEQEEKRLRRQQ-RKVREEYRLLLESL 456
Score = 39 (18.8 bits), Expect = 4.6e-14, Sum P(4) = 4.6e-14
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 919 HRKRHQSAHDSLDENEKDRSKNPHR 943
H K+ + HD E E+ R + R
Sbjct: 419 HIKQAEKEHDEEKEQEEKRLRRQQR 443
Score = 37 (18.1 bits), Expect = 4.0e-46, Sum P(3) = 4.0e-46
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 944 HNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE 987
+NS +K A E E+ R +R + RN +++ +D E
Sbjct: 556 YNSLIEKAESKAKDEEKESLRRKRRLESEFRNLLKEHNVDKDSE 599
>POMBASE|SPAC4D7.13 [details] [associations]
symbol:usp104 "U1 snRNP-associated protein Usp104"
species:4896 "Schizosaccharomyces pombe" [GO:0000243 "commitment
complex" evidence=ISS] [GO:0000395 "mRNA 5'-splice site
recognition" evidence=IC] [GO:0003723 "RNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005685 "U1 snRNP"
evidence=IDA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IPI] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 PomBase:SPAC4D7.13 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003723 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0000243 Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 GO:GO:0005685
GO:GO:0000395 KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0
eggNOG:COG5104 PIR:T38804 RefSeq:NP_594966.1
ProteinModelPortal:O14176 STRING:O14176 EnsemblFungi:SPAC4D7.13.1
GeneID:2543409 KEGG:spo:SPAC4D7.13 OMA:FRELEVW OrthoDB:EOG41VPBS
NextBio:20804424 Uniprot:O14176
Length = 695
Score = 375 (137.1 bits), Expect = 6.2e-50, Sum P(2) = 6.2e-50
Identities = 110/489 (22%), Positives = 222/489 (45%)
Query: 373 VSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEE 432
+SS I V + + +++A A D+ +++ + K + + D ++
Sbjct: 120 LSSKIKSNDNKPAVQSIQRHGPDVAAPSSQPAKDQ-SQQISQGSHKRTINFVQQKDKRQK 178
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTA 492
++ + +H Y A+ AF L+S NV WTW+Q +R + + + Y ++ RK A
Sbjct: 179 RSNDYQHENYDTYEAAERAFFKFLDSHNVNPSWTWEQTVRELCDAKGYYVMKDPWHRKCA 238
Query: 493 FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALE 552
F+ Y+ ++ + ++ K R ++ +ML+ S ++ S T W F + F A
Sbjct: 239 FDAYILNYLTDQSDAEKNRVTKIRKEFIEMLKSSDKIHSYTLWRTVKNEFSSHPAFNATS 298
Query: 553 RERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEA 612
E +++ +F ++ +L + E+ ++ RK + ++ L + +F + T+W Q + +
Sbjct: 299 SETEQQQLFFEYKQKLLEDEKQLEKDRRKEALDDFCSLLRNMNF-EPYTRWSVAQAKFDQ 357
Query: 613 DERCSR------LDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLME 666
D R +R L K+D L F + ERKNRD FR L++
Sbjct: 358 DPRYTRNSNMKYLSKLDALVAFEDHVKHLEREYILDKQKQKKEKHRIERKNRDAFRALLQ 417
Query: 667 ADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
+T +T W++ +KD P Y+ + SGSTP DLF D + +L+ ++E +
Sbjct: 418 DLRVQKKITLRTKWKELYPIIKDDPRYLNLLGQ-SGSTPLDLFWDTIVDLENMYREKRNL 476
Query: 727 IKDAVKLRKITLSSTWTFEDFKASV---LEDAT-SPPISDVNLKLIFDDLLIXXXXXXXX 782
+ D +++ +I++ T + A + L+D S +++ ++ + + L
Sbjct: 477 VLDCLEVLQISVDDTSNIPEIIARLSEKLKDREESEAVTEDLIEEVVNRLRDKAIHKKAE 536
Query: 783 XXXXXXXXXXXFFDLLCS-VK----EISATSTWENCRQLLEGSQEFSSIGDESICRGVFD 837
D L S +K ISA ++++ R L+ EF+++ E FD
Sbjct: 537 EKRADERRIRRKIDNLRSAIKYLKPPISADASYDEIRPLISILPEFAALHSEEHRMAAFD 596
Query: 838 EFVTQLKEQ 846
+++ +L+E+
Sbjct: 597 KYIRRLREK 605
Score = 223 (83.6 bits), Expect = 6.2e-50, Sum P(2) = 6.2e-50
Identities = 51/118 (43%), Positives = 67/118 (56%)
Query: 196 VQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYN 255
V +DW E + D R YY+N TR S W+KP ELM E+ + WKE+ + DG+KY+YN
Sbjct: 32 VASDWHEVKTEDSRVYYYNSVTRKSVWEKPEELMNDFEKKLSKLAWKEYATADGKKYWYN 91
Query: 256 KVTKQSKWSLPDELKLAR----EQAEKA-SIKGTQSETSPNSQTSISFPSSVVKAPSS 308
T++S W +PDE K A EQ +KA S K ++ P Q SI V APSS
Sbjct: 92 VNTRESVWDIPDEYKAALVDEPEQQKKALSSKIKSNDNKPAVQ-SIQRHGPDVAAPSS 148
Score = 65 (27.9 bits), Expect = 2.2e-16, Sum P(2) = 2.2e-16
Identities = 30/128 (23%), Positives = 65/128 (50%)
Query: 412 VTEETRKDAV---RGEKVSDALEEKTVEQEHFAYANKLE-AKNAFKALLESANVGSDWTW 467
VTE+ ++ V R + + EEK ++ K++ ++A K L + +D ++
Sbjct: 514 VTEDLIEEVVNRLRDKAIHKKAEEKRADERRIR--RKIDNLRSAIKYL--KPPISADASY 569
Query: 468 DQALRAIINDR-RYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEES 526
D+ +R +I+ + AL + R AF++Y+ + +++ E++ + ++ D K +ES
Sbjct: 570 DE-IRPLISILPEFAALHSEEHRMAAFDKYIRRLREKRELEKQYQNRRGYYDVGK--DES 626
Query: 527 VELTSSTR 534
L +S R
Sbjct: 627 Y-LANSAR 633
Score = 63 (27.2 bits), Expect = 3.5e-16, Sum P(2) = 3.5e-16
Identities = 20/93 (21%), Positives = 43/93 (46%)
Query: 500 KKKQD--AEERRLKLKKARDDYKKMLEE-SVELTSSTRWSKAVTMFENDERFKALERERD 556
KK ++ A+ERR++ K D+ + ++ +++ + + + F AL E
Sbjct: 533 KKAEEKRADERRIRRKI--DNLRSAIKYLKPPISADASYDEIRPLISILPEFAALHSEEH 590
Query: 557 RKDMFDDHLDELKQKERAKAQEERKRNIIEYRK 589
R FD ++ L++K + Q + +R + K
Sbjct: 591 RMAAFDKYIRRLREKRELEKQYQNRRGYYDVGK 623
Score = 48 (22.0 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 12/55 (21%), Positives = 25/55 (45%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKEQAK 848
F ++L S +I + + W + F++ E+ + +F E+ +L E K
Sbjct: 265 FIEMLKSSDKIHSYTLWRTVKNEFSSHPAFNATSSETEQQQLFFEYKQKLLEDEK 319
>UNIPROTKB|F5H578 [details] [associations]
symbol:PRPF40A "Pre-mRNA-processing factor 40 homolog A"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0005634 Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AC079344
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 EMBL:AC012443 HGNC:HGNC:16463 ChiTaRS:PRPF40A
IPI:IPI01018842 ProteinModelPortal:F5H578 SMR:F5H578 PRIDE:F5H578
Ensembl:ENST00000545856 UCSC:uc002tyj.2 ArrayExpress:F5H578
Bgee:F5H578 Uniprot:F5H578
Length = 448
Score = 365 (133.5 bits), Expect = 1.5e-32, P = 1.5e-32
Identities = 95/316 (30%), Positives = 147/316 (46%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+A G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 138 TASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 197
Query: 252 YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA-- 309
YYYN TK+S+W+ P EL+ ++G Q+ S + S +++KA S+
Sbjct: 198 YYYNSQTKESRWAKPKELE---------DLEGYQNTIVAGSLITKSNLHAMIKAEESSKQ 248
Query: 310 DIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGFPK---TVDA 366
+ + A ANA+ TV
Sbjct: 249 EECTTTSTAPVPTTEIPTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSG 308
Query: 367 IAPMI---DVSSSIGEAV-TDNTVAEAKNNLSNMSASDLV-GASDKVPPPVTEETRK-DA 420
P++ +V+S + V +NTV + + ++++ + S +V EET K +
Sbjct: 309 TVPVVPEPEVTSIVATVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSKQET 368
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
V EE ++ + + K EAK AFK LL+ V S+ +W+QA++ IIND RY
Sbjct: 369 VADFTPKKEEEESQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRY 428
Query: 481 GALRTLGERKTAFNEY 496
AL L E+K AFN Y
Sbjct: 429 SALAKLSEKKQAFNAY 444
>UNIPROTKB|F1NT10 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] [GO:0001106 "RNA
polymerase II transcription corepressor activity" evidence=IEA]
[GO:0070064 "proline-rich region binding" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 GeneTree:ENSGT00530000062987 OMA:MEEMNED
EMBL:AADN02028198 EMBL:AADN02028199 IPI:IPI00584064
Ensembl:ENSGALT00000012177 Uniprot:F1NT10
Length = 1019
Score = 253 (94.1 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 58/224 (25%), Positives = 122/224 (54%)
Query: 404 ASDKVPPPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAK-NAFKALLESANVG 462
A++ P + + + D + +A E ++ LEA+ FK +L V
Sbjct: 538 ANEDEPIKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVS 597
Query: 463 SDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKM 522
+ TW++ L I+ D RY L ERK F++Y+ + +++ +E++ K+ +A++D+KKM
Sbjct: 598 AFSTWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKM 656
Query: 523 LEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKR 582
+EES ++ T +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 657 MEES-KINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKTRGEK 715
Query: 583 NIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLE 626
+++ + L + + + ++W KV+D++E D R +D + E
Sbjct: 716 IKMDFFELLAN-HHLDSQSRWSKVKDKVETDPRYKAVDSSSQRE 758
Score = 197 (74.4 bits), Expect = 1.6e-21, Sum P(5) = 1.6e-21
Identities = 48/188 (25%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E + + T+ + D R+ A
Sbjct: 624 KQVFDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEESKINPRTTFSEFAAKHAKDSRFKA 683
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 684 IEKMKDREALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANH-HLDSQSRWSKVKDKV 742
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 743 ETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARS 802
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 803 EQTKEIDR 810
Score = 133 (51.9 bits), Expect = 5.7e-14, Sum P(4) = 5.7e-14
Identities = 55/208 (26%), Positives = 100/208 (48%)
Query: 422 RGEKVSDALEEKTVEQEHFAYANKLE-AKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
R +V A E+T E + +K E A FKALL SD +W R + D R+
Sbjct: 793 REREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRW 852
Query: 481 --GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKA 538
G+L E++ FNE++ KK R+ ++++L+E+ +T ++ W +
Sbjct: 853 ESGSLLEREEKEKLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEV 901
Query: 539 VTMFENDER---FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ES 593
+ + D R F + +R++ R+ F++++ + + AKA R +++ KF+ S
Sbjct: 902 KKIIKEDPRCIKFSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRS 954
Query: 594 CDFIKANTQWRK-VQDRLEADERCSRLD 620
I+ + Q K V+ L+ D+R LD
Sbjct: 955 KKLIQESDQHLKDVEKILQNDKRYLVLD 982
Score = 127 (49.8 bits), Expect = 2.5e-13, Sum P(4) = 2.5e-13
Identities = 36/144 (25%), Positives = 70/144 (48%)
Query: 485 TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFE 543
+L ER+ + ++ K+ D E + K ++A ++K +L + V +S WS
Sbjct: 789 SLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVR-SSDVSWSDTRRTLR 847
Query: 544 NDERFKA---LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
D R+++ LERE K +F++H++ L +K+R +R+ L+ I
Sbjct: 848 KDHRWESGSLLEREEKEK-LFNEHIEALTKKKRE-----------HFRQLLDETSAITLT 895
Query: 601 TQWRKVQDRLEADERCSRLDKMDR 624
+ W++V+ ++ D RC + DR
Sbjct: 896 STWKEVKKIIKEDPRCIKFSSSDR 919
Score = 126 (49.4 bits), Expect = 6.8e-14, Sum P(5) = 6.8e-14
Identities = 56/225 (24%), Positives = 98/225 (43%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 572 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 629
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E I T + + + D R ++KM
Sbjct: 630 YVKTRAEEERKEKKNKIMQAKEDFKKMMEESK-INPRTTFSEFAAKHAKDSRFKAIEKMK 688
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ A L +++ W
Sbjct: 689 DREALFNEFITAARKKEKED--------SKTRGEKIKMDFFELL----ANHHLDSQSRWS 736
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 737 KVKDKVETDPRYKAVDSS---SQREDLFKQYIEKIAKNLDSEKEK 778
Score = 112 (44.5 bits), Expect = 4.0e-25, Sum P(4) = 4.0e-25
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSE 287
T+ A A ++W E+ + DG+ YYYN T +S W P ELK +E+ E+ IK T E
Sbjct: 349 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELK-EKEKLEE-KIKETIKE 403
Score = 110 (43.8 bits), Expect = 6.4e-25, Sum P(4) = 6.4e-25
Identities = 23/96 (23%), Positives = 44/96 (45%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPS 300
W E +PDG+ Y+YN T++S W+ PD +K+ +Q+E + Q++ ++ T+ S +
Sbjct: 134 WVENKTPDGKVYFYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVGASTPTTSS--A 190
Query: 301 SVVKAPSSADIXXXXXXXXXXXXXXXXXXXXXXXTQ 336
+ +PS++ TQ
Sbjct: 191 AAAASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQ 226
Score = 106 (42.4 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 357 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 387
Score = 96 (38.9 bits), Expect = 1.7e-23, Sum P(4) = 1.7e-23
Identities = 33/121 (27%), Positives = 53/121 (43%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFEL-------MTTIERADASTDWKEFTSPDGRKY 252
W E+ + DG+ Y++N RTR S W KP + +T + A A T+
Sbjct: 134 WVENKTPDGKVYFYNARTRESAWTKPDGVKVIQQSELTPMLAAQAQVGASTPTTSSAAAA 193
Query: 253 YYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPS-SV-VKAPSSAD 310
+ ++ S A ++ S TQ +T P+S S++ PS SV APS+
Sbjct: 194 ASPSTSSSTQSSTTSTTTTATSVSQTNSTPTTQDQT-PSSGVSVATPSVSVSTSAPSATP 252
Query: 311 I 311
+
Sbjct: 253 V 253
Score = 77 (32.2 bits), Expect = 1.5e-06, Sum P(4) = 1.5e-06
Identities = 69/336 (20%), Positives = 137/336 (40%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDW--TWD 468
P+ ET ++ + E + + ++E+ E+E + +A K + + G+ W W
Sbjct: 408 PLPMETEEEEPKEEPIKELIKEEPKEEE---MTEEEKAAQKAKPVATTPIPGTPWCVVWT 464
Query: 469 QALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKM-LEESV 527
R + ++ +R ++ +G + D + KK ++ KK+ +++ +
Sbjct: 465 GDERVFFYNPT--TRLSMWDRP---DDLIG-RADVDKIIQEPPHKKGMEEGKKLNIKKCI 518
Query: 528 ELTS----STRWSKAVTMFEN-DERFKALERERD-RKDMFDDHLDELKQKERAKAQEERK 581
+L + R T N DE K +R++D KD+ D E + KA ER
Sbjct: 519 QLWNFFKKEVREEHETTEEANEDEPIKIKKRKKDDNKDI--DSEKEAAMEAEIKAARERA 576
Query: 582 RNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXX 637
+E R +F + + A + W K ++ D R L+ +R ++F
Sbjct: 577 IVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYLLLNPKERKQVFDQYVKTRAE 636
Query: 638 XXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALGTLTAKTNWRDYCIK-VKDSP 691
+ E+KN+ ++F+K+ME + +T + ++ K KDS
Sbjct: 637 E------------ERKEKKNKIMQAKEDFKKMMEES----KINPRTTFSEFAAKHAKDSR 680
Query: 692 PYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ A+ LF + + +K+ +ED KTR
Sbjct: 681 -FKAIEKMKDREA---LFNEFITAARKKEKEDSKTR 712
Score = 73 (30.8 bits), Expect = 1.3e-08, Sum P(5) = 1.3e-08
Identities = 26/110 (23%), Positives = 49/110 (44%)
Query: 449 KNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQ-KKKQDAEE 507
K F LL + ++ S W + + D RY A+ + +R+ F +Y+ + K D+E+
Sbjct: 717 KMDFFELLANHHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKIAKNLDSEK 776
Query: 508 RRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR 557
+K LE + +S R + E+ K ++RER++
Sbjct: 777 ------------EKELERQARIEASLREREREVQKARSEQTKEIDREREQ 814
Score = 73 (30.8 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 59/358 (16%), Positives = 133/358 (37%)
Query: 501 KKQDAEERRLKLKKARDDYKKMLEESVELTS-STRWS--KAVTMFENDERFKALERERDR 557
K++ EE + +KA K + + T W+ + V + R +R D
Sbjct: 428 KEEPKEEEMTEEEKAAQKAKPVATTPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDDL 487
Query: 558 KDMFDDHLDELKQKE-RAKAQEERKRNIIEYRKFLESCDFIKANT-QWRKVQDRLEADE- 614
D +D++ Q+ K EE K+ + +K ++ +F K + + + DE
Sbjct: 488 IGRAD--VDKIIQEPPHKKGMEEGKK--LNIKKCIQLWNFFKKEVREEHETTEEANEDEP 543
Query: 615 -RCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGT 673
+ + K D +I ++ +D L+E V+
Sbjct: 544 IKIKKRKKDDNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKD---MLLERGVS--- 597
Query: 674 LTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE-ELQKQFQEDKTRIKDAVK 732
A + W K+ P Y+ + + K +F+ V+ +++ +E K +I A +
Sbjct: 598 --AFSTWEKELHKIVFDPRYLLL----NPKERKQVFDQYVKTRAEEERKEKKNKIMQAKE 651
Query: 733 -----LRKITLSSTWTFEDFKASVLEDATSPPISDV-NLKLIFDDLLIXXXXXXXXXXXX 786
+ + ++ TF +F A +D+ I + + + +F++ +
Sbjct: 652 DFKKMMEESKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARKKEKEDSKT 711
Query: 787 XXXXXXX-FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL 843
FF+LL + + + S W + +E + ++ S +F +++ ++
Sbjct: 712 RGEKIKMDFFELLAN-HHLDSQSRWSKVKDKVETDPRYKAVDSSSQREDLFKQYIEKI 768
Score = 72 (30.4 bits), Expect = 4.7e-21, Sum P(4) = 4.7e-21
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERAD 236
T W + D R +++N TR+S WD+P +L I RAD
Sbjct: 457 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRAD 492
Score = 71 (30.1 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 239 TDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEK 278
T W + D R ++YN T+ S W PD+L + R +K
Sbjct: 457 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL-IGRADVDK 495
Score = 71 (30.1 bits), Expect = 2.0e-08, Sum P(5) = 2.0e-08
Identities = 53/296 (17%), Positives = 116/296 (39%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEE-RRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K K A+D K +E+
Sbjct: 627 FDQYVKTRAEEERKEKKNKIMQAKEDFKKMMEESKINPRTTFSEFAAKHAKDSRFKAIEK 686
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ +T E+ + R E+ + D F+ HLD + K + K +
Sbjct: 687 MKD--REALFNEFITAARKKEKEDSKTRGEKIKMDFFELLANHHLDSQSRWSKVKDKVET 744
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 745 DPRYKAVDSSSQRE--DLFKQYIE--KIAKNLDSEKE-KELERQARIE--ASLREREREV 797
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 798 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 856
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 857 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 908
Score = 53 (23.7 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 16 PHQPPMVGSMDPPRGQGGLIMNAGFPSQPLQPP 48
P PP +GSM PP G ++ G P P+ P
Sbjct: 95 PFMPPPMGSMPPPPG---MMFPPGMP--PVTAP 122
Score = 48 (22.0 bits), Expect = 1.9e-05, Sum P(4) = 1.9e-05
Identities = 22/124 (17%), Positives = 45/124 (36%)
Query: 726 RIKDAVKLRKITLSSTWTFEDFKASVLEDATSPPISDVNLKLIFDDLLIXXXXXXXXXXX 785
+ KD + R ++ STW E K ++ D ++ K +FD +
Sbjct: 586 QFKDMLLERGVSAFSTWEKELHK--IVFDPRYLLLNPKERKQVFDQYVKTRAEEERKEKK 643
Query: 786 XXXXXXXXFFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQLKE 845
F + +I+ +T+ F +I +F+EF+T ++
Sbjct: 644 NKIMQAKEDFKKMMEESKINPRTTFSEFAAKHAKDSRFKAIEKMKDREALFNEFITAARK 703
Query: 846 QAKD 849
+ K+
Sbjct: 704 KEKE 707
Score = 47 (21.6 bits), Expect = 1.1e-27, Sum P(5) = 1.1e-27
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 882 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 929
>MGI|MGI:1926421 [details] [associations]
symbol:Tcerg1 "transcription elongation regulator 1 (CA150)"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0016363 "nuclear
matrix" evidence=ISS] [GO:0070064 "proline-rich region binding"
evidence=IDA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 MGI:MGI:1926421 GO:GO:0005634
GO:GO:0003700 GO:GO:0006351 GO:GO:0070064 GO:GO:0001106
Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
PDB:2JUP PDB:2RLY PDB:2RM0 PDBsum:2JUP PDBsum:2RLY PDBsum:2RM0
eggNOG:COG5104 GeneTree:ENSGT00530000062987 CTD:10915
HOGENOM:HOG000008544 HOVERGEN:HBG062908 KO:K12824 OMA:MEEMNED
OrthoDB:EOG40CHGM EMBL:BC039185 EMBL:BC040284 EMBL:AB023485
EMBL:U40749 EMBL:AK082750 IPI:IPI00229485 IPI:IPI00471277
IPI:IPI00471279 PIR:S64716 RefSeq:NP_001034563.1 UniGene:Mm.270511
PDB:1E0L PDB:2YSI PDBsum:1E0L PDBsum:2YSI ProteinModelPortal:Q8CGF7
SMR:Q8CGF7 STRING:Q8CGF7 PhosphoSite:Q8CGF7 PaxDb:Q8CGF7
PRIDE:Q8CGF7 Ensembl:ENSMUST00000025375 Ensembl:ENSMUST00000173642
GeneID:56070 KEGG:mmu:56070 UCSC:uc008etw.1 InParanoid:Q8CGF7
EvolutionaryTrace:Q8CGF7 NextBio:311856 Bgee:Q8CGF7
CleanEx:MM_TCERG1 Genevestigator:Q8CGF7
GermOnline:ENSMUSG00000024498 Uniprot:Q8CGF7
Length = 1100
Score = 238 (88.8 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 61/224 (27%), Positives = 122/224 (54%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDW 465
P+ + RK K D+ +E +E E A + LEA+ FK +L V +
Sbjct: 624 PIKAKKRKRD--DNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFS 681
Query: 466 TWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
TW++ L I+ D RY L ERK F++Y+ + +++ E++ K+ +A++D+KKM+EE
Sbjct: 682 TWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEE 740
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNII 585
+ + +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 741 A-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKS 799
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMD-RLEIF 628
++ + L + + + ++W KV+D++E+D R +D R ++F
Sbjct: 800 DFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF 842
Score = 198 (74.8 bits), Expect = 3.2e-23, Sum P(5) = 3.2e-23
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E A T+ + D R+ A
Sbjct: 705 KQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKA 764
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 765 IEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNH-HLDSQSRWSKVKDKV 823
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E+D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 824 ESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARS 883
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 884 EQTKEIDR 891
Score = 135 (52.6 bits), Expect = 7.9e-16, Sum P(4) = 7.9e-16
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKVSDALEE 432
SSS+ E + + + NL + +L + ++ + E R+ R E+ + E
Sbjct: 834 SSSMREDLFKQYIEKIAKNLDSEKEKELERQA-RIEASLREREREVQKARSEQTKEIDRE 892
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY--GALRTLGERK 490
+ ++H + EA FKALL SD +W R + D R+ G+L E++
Sbjct: 893 R---EQH----KREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE 945
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--- 547
FNE++ KK R+ ++++L+E+ +T ++ W + + + D R
Sbjct: 946 KLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIK 994
Query: 548 FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ESCDFIKANTQWRK 605
F + +R++ R+ F++++ + + AKA R +++ KF+ S I+ + Q K
Sbjct: 995 FSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRSKKLIQESDQHLK 1047
Query: 606 -VQDRLEADERCSRLD 620
V+ L+ D+R LD
Sbjct: 1048 DVEKILQNDKRYLVLD 1063
Score = 129 (50.5 bits), Expect = 3.4e-15, Sum P(4) = 3.4e-15
Identities = 54/231 (23%), Positives = 105/231 (45%)
Query: 414 EETRKDAVRGEKV-SDALE----EKTVEQEHFAYA-NKLEAKNAFKALLESANVGSDWTW 467
+E RGEK+ SD E Q ++ +K+E+ +KA+ +S+++ D +
Sbjct: 785 KEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAV-DSSSMRED-LF 842
Query: 468 DQALRAIIND---------RRYGALR-TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKAR 516
Q + I + R + +L ER+ + ++ K+ D E + K ++A
Sbjct: 843 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI 902
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKA---LERERDRKDMFDDHLDELKQKER 573
++K +L + V +S WS D R+++ LERE K +F++H++ L +K+R
Sbjct: 903 QNFKALLSDMVR-SSDVSWSDTRRTLRKDHRWESGSLLEREEKEK-LFNEHIEALTKKKR 960
Query: 574 AKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
+R+ L+ I + W++V+ ++ D RC + DR
Sbjct: 961 E-----------HFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDR 1000
Score = 126 (49.4 bits), Expect = 1.8e-15, Sum P(5) = 1.8e-15
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 653 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 710
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E F T + + + D R ++KM
Sbjct: 711 YVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRAT-FSEFAAKHAKDSRFKAIEKMK 769
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ L +++ W
Sbjct: 770 DREALFNEFVAAARKKEKED--------SKTRGEKIKSDFFELLSNH----HLDSQSRWS 817
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 818 KVKDKVESDPRYKAVDSS---SMREDLFKQYIEKIAKNLDSEKEK 859
Score = 112 (44.5 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 38/182 (20%), Positives = 66/182 (36%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPS 300
W E +PDG+ YYYN T++S W+ PD +K+ +Q+E + Q++ +Q +
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVQAQAQAQAQAQA 195
Query: 301 SVVKAPSSADIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGF 360
+A + A Q A A
Sbjct: 196 QA-QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQ 254
Query: 361 PKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEE-TRKD 419
+ V A P +SS AV+ +T ++ + + + + V P T++ T
Sbjct: 255 AQAVGAPTP---TTSSPAPAVSTSTPTSTPSS-TTATTTTATSVAQTVSTPTTQDQTPSS 310
Query: 420 AV 421
AV
Sbjct: 311 AV 312
Score = 111 (44.1 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKAS--IKGTQSET 288
T+ A A ++W E+ + DG+ YYYN T +S W P ELK + EK IK E
Sbjct: 427 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEP 486
Query: 289 SP 290
P
Sbjct: 487 LP 488
Score = 106 (42.4 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 435 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 465
Score = 86 (35.3 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKP 225
W E+ + DG+ YY+N RTR S W KP
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKP 162
Score = 79 (32.9 bits), Expect = 9.6e-20, Sum P(4) = 9.6e-20
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T W + D R +++N TR+S WD+P +L I RAD K P +K +
Sbjct: 534 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRADVD---KIIQEPPHKKGLEDM- 586
Query: 258 TKQSKWSLPDELKLAREQAEKASIKGTQ 285
K+ + P L + + Q ++IK Q
Sbjct: 587 -KKLRHPAPTMLSIQKWQFSMSAIKEEQ 613
Score = 79 (32.9 bits), Expect = 9.2e-11, Sum P(5) = 9.2e-11
Identities = 54/236 (22%), Positives = 95/236 (40%)
Query: 513 KKARDDYKKMLEESVELTSSTRWSKAVTMFEN----------DERFKALERERD-RKDMF 561
KK +D KK+ + + S +W +++ + DE KA +R+RD KD+
Sbjct: 580 KKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRDDNKDI- 638
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCS 617
D E + KA ER +E R +F + + A + W K ++ D R
Sbjct: 639 -DSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYL 697
Query: 618 RLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALG 672
L+ +R ++F + E+KN+ ++F+K+ME
Sbjct: 698 LLNPKERKQVFDQYVKTRAEE------------ERREKKNKIMQAKEDFKKMMEE----A 741
Query: 673 TLTAKTNWRDYCIK-VKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ + ++ K KDS + A+ LF + V +K+ +ED KTR
Sbjct: 742 KFNPRATFSEFAAKHAKDSR-FKAIEKMKDREA---LFNEFVAAARKKEKEDSKTR 793
Score = 75 (31.5 bits), Expect = 2.4e-10, Sum P(5) = 2.4e-10
Identities = 54/296 (18%), Positives = 116/296 (39%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK-KQDAEERRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K A K A+D K +E+
Sbjct: 708 FDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEK 767
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ V E+ + R E+ + D F+ HLD + K + K +
Sbjct: 768 MKD--REALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES 825
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 826 DPRYKAVDSSSMRE--DLFKQYIE--KIAKNLDSEKE-KELERQARIE--ASLREREREV 878
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 879 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 937
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 938 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 989
Score = 74 (31.1 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 30/178 (16%), Positives = 75/178 (42%)
Query: 674 LTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE-ELQKQFQEDKTRIKDAVK 732
++A + W K+ P Y+ + + K +F+ V+ +++ +E K +I A +
Sbjct: 677 VSAFSTWEKELHKIVFDPRYLLL----NPKERKQVFDQYVKTRAEEERREKKNKIMQAKE 732
Query: 733 -LRKITLSSTW----TFEDFKASVLEDATSPPISDV-NLKLIFDDLLIXXXXXXXXXXXX 786
+K+ + + TF +F A +D+ I + + + +F++ +
Sbjct: 733 DFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKT 792
Query: 787 XXXXXXX-FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL 843
FF+LL S + + S W + +E + ++ S+ +F +++ ++
Sbjct: 793 RGEKIKSDFFELL-SNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKI 849
Score = 51 (23.0 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 16 PHQPPMVGSMDPPRGQ---GGLIMNAGFPSQPLQPP 48
P PP +G+M PP G G+ P P PP
Sbjct: 98 PFMPPPMGAMPPPPGMMFPPGMPPGTA-PGAPALPP 132
Score = 51 (23.0 bits), Expect = 1.5e-21, Sum P(5) = 1.5e-21
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 272 AREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPS 307
A A+ S TQ +T P+S S++ P+ V AP+
Sbjct: 291 ATSVAQTVSTPTTQDQT-PSSAVSVATPTVSVSAPA 325
Score = 47 (21.6 bits), Expect = 1.3e-27, Sum P(5) = 1.3e-27
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 963 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 1010
Score = 37 (18.1 bits), Expect = 2.5e-09, Sum P(5) = 2.5e-09
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 551 LERERDRKDMFDDHLDELKQ--KERAKAQEER 580
L E + +D ++ + E+K+ KE +EE+
Sbjct: 487 LPMETEEEDPKEEPVKEIKEEPKEEEMTEEEK 518
>UNIPROTKB|O14776 [details] [associations]
symbol:TCERG1 "Transcription elongation regulator 1"
species:9606 "Homo sapiens" [GO:0070064 "proline-rich region
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=IPI] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0005634 GO:GO:0003713
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
eggNOG:COG5104 EMBL:AF017789 EMBL:AB209910 EMBL:BC111727
IPI:IPI00247871 IPI:IPI00744062 PIR:T08599 RefSeq:NP_001035095.1
RefSeq:NP_006697.2 UniGene:Hs.735127 PDB:2DK7 PDB:2DOD PDB:2DOE
PDB:2DOF PDB:2E71 PDB:2KIQ PDB:2KIS PDB:2NNT PDB:3HFH PDBsum:2DK7
PDBsum:2DOD PDBsum:2DOE PDBsum:2DOF PDBsum:2E71 PDBsum:2KIQ
PDBsum:2KIS PDBsum:2NNT PDBsum:3HFH ProteinModelPortal:O14776
SMR:O14776 IntAct:O14776 MINT:MINT-158391 STRING:O14776
PhosphoSite:O14776 PaxDb:O14776 PRIDE:O14776
Ensembl:ENST00000296702 Ensembl:ENST00000394421 GeneID:10915
KEGG:hsa:10915 UCSC:uc003lob.3 UCSC:uc003loc.3 CTD:10915
GeneCards:GC05P145807 HGNC:HGNC:15630 MIM:605409 neXtProt:NX_O14776
PharmGKB:PA38007 HOGENOM:HOG000008544 HOVERGEN:HBG062908
InParanoid:O14776 KO:K12824 OMA:MEEMNED OrthoDB:EOG40CHGM
PhylomeDB:O14776 EvolutionaryTrace:O14776 GenomeRNAi:10915
NextBio:41457 ArrayExpress:O14776 Bgee:O14776 CleanEx:HS_TCERG1
Genevestigator:O14776 GermOnline:ENSG00000113649 Uniprot:O14776
Length = 1098
Score = 239 (89.2 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 62/224 (27%), Positives = 122/224 (54%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDW 465
PV + RK K D+ +E +E E A + LEA+ FK +L V +
Sbjct: 622 PVKAKKRKRD--DNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFS 679
Query: 466 TWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
TW++ L I+ D RY L ERK F++Y+ + +++ E++ K+ +A++D+KKM+EE
Sbjct: 680 TWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEE 738
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNII 585
+ + +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 739 A-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKS 797
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMD-RLEIF 628
++ + L + + + ++W KV+D++E+D R +D R ++F
Sbjct: 798 DFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF 840
Score = 198 (74.8 bits), Expect = 8.0e-23, Sum P(5) = 8.0e-23
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E A T+ + D R+ A
Sbjct: 703 KQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKA 762
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 763 IEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNH-HLDSQSRWSKVKDKV 821
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E+D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 822 ESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARS 881
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 882 EQTKEIDR 889
Score = 135 (52.6 bits), Expect = 2.0e-15, Sum P(4) = 2.0e-15
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKVSDALEE 432
SSS+ E + + + NL + +L + ++ + E R+ R E+ + E
Sbjct: 832 SSSMREDLFKQYIEKIAKNLDSEKEKELERQA-RIEASLREREREVQKARSEQTKEIDRE 890
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY--GALRTLGERK 490
+ ++H + EA FKALL SD +W R + D R+ G+L E++
Sbjct: 891 R---EQH----KREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE 943
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--- 547
FNE++ KK R+ ++++L+E+ +T ++ W + + + D R
Sbjct: 944 KLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIK 992
Query: 548 FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ESCDFIKANTQWRK 605
F + +R++ R+ F++++ + + AKA R +++ KF+ S I+ + Q K
Sbjct: 993 FSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRSKKLIQESDQHLK 1045
Query: 606 -VQDRLEADERCSRLD 620
V+ L+ D+R LD
Sbjct: 1046 DVEKILQNDKRYLVLD 1061
Score = 129 (50.5 bits), Expect = 8.5e-15, Sum P(4) = 8.5e-15
Identities = 54/231 (23%), Positives = 105/231 (45%)
Query: 414 EETRKDAVRGEKV-SDALE----EKTVEQEHFAYA-NKLEAKNAFKALLESANVGSDWTW 467
+E RGEK+ SD E Q ++ +K+E+ +KA+ +S+++ D +
Sbjct: 783 KEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAV-DSSSMRED-LF 840
Query: 468 DQALRAIIND---------RRYGALR-TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKAR 516
Q + I + R + +L ER+ + ++ K+ D E + K ++A
Sbjct: 841 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI 900
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKA---LERERDRKDMFDDHLDELKQKER 573
++K +L + V +S WS D R+++ LERE K +F++H++ L +K+R
Sbjct: 901 QNFKALLSDMVR-SSDVSWSDTRRTLRKDHRWESGSLLEREEKEK-LFNEHIEALTKKKR 958
Query: 574 AKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
+R+ L+ I + W++V+ ++ D RC + DR
Sbjct: 959 E-----------HFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDR 998
Score = 126 (49.4 bits), Expect = 4.3e-15, Sum P(5) = 4.3e-15
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 651 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 708
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E F T + + + D R ++KM
Sbjct: 709 YVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRAT-FSEFAAKHAKDSRFKAIEKMK 767
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ L +++ W
Sbjct: 768 DREALFNEFVAAARKKEKED--------SKTRGEKIKSDFFELLSNH----HLDSQSRWS 815
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 816 KVKDKVESDPRYKAVDSS---SMREDLFKQYIEKIAKNLDSEKEK 857
Score = 111 (44.1 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKAS--IKGTQSET 288
T+ A A ++W E+ + DG+ YYYN T +S W P ELK + EK IK E
Sbjct: 425 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEP 484
Query: 289 SP 290
P
Sbjct: 485 LP 486
Score = 107 (42.7 bits), Expect = 2.7e-22, Sum P(4) = 2.7e-22
Identities = 36/181 (19%), Positives = 65/181 (35%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPS 300
W E +PDG+ YYYN T++S W+ PD +K+ +Q+E + Q++ +Q
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVQAQAQAQAQ--- 192
Query: 301 SVVKAPSSADIXXXXXXXXXXXXXXXXXXXXXXXTQPALXXXXXXXXXXXXXXXANADGF 360
+ +A + A Q A
Sbjct: 193 AQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQ 252
Query: 361 PKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDA 420
+ V A P +SS AV+ +T + ++ ++ + + A P ++T A
Sbjct: 253 AQAVGASTP---TTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSA 309
Query: 421 V 421
V
Sbjct: 310 V 310
Score = 106 (42.4 bits), Expect = 3.5e-22, Sum P(4) = 3.5e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 433 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 463
Score = 86 (35.3 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 14/26 (53%), Positives = 18/26 (69%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKP 225
W E+ + DG+ YY+N RTR S W KP
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKP 162
Score = 79 (32.9 bits), Expect = 1.9e-19, Sum P(4) = 1.9e-19
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T W + D R +++N TR+S WD+P +L I RAD K P +K +
Sbjct: 532 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRADVD---KIIQEPPHKKGM--EE 583
Query: 258 TKQSKWSLPDELKLAREQAEKASIKGTQ 285
K+ + P L + + Q ++IK Q
Sbjct: 584 LKKLRHPTPTMLSIQKWQFSMSAIKEEQ 611
Score = 75 (31.5 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 53/236 (22%), Positives = 95/236 (40%)
Query: 513 KKARDDYKKMLEESVELTSSTRWSKAVTMFEN----------DERFKALERERD-RKDMF 561
KK ++ KK+ + + S +W +++ + DE KA +R+RD KD+
Sbjct: 578 KKGMEELKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEINEDEPVKAKKRKRDDNKDI- 636
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCS 617
D E + KA ER +E R +F + + A + W K ++ D R
Sbjct: 637 -DSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYL 695
Query: 618 RLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALG 672
L+ +R ++F + E+KN+ ++F+K+ME
Sbjct: 696 LLNPKERKQVFDQYVKTRAEE------------ERREKKNKIMQAKEDFKKMMEE----A 739
Query: 673 TLTAKTNWRDYCIK-VKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ + ++ K KDS + A+ LF + V +K+ +ED KTR
Sbjct: 740 KFNPRATFSEFAAKHAKDSR-FKAIEKMKDREA---LFNEFVAAARKKEKEDSKTR 791
Score = 75 (31.5 bits), Expect = 5.7e-10, Sum P(5) = 5.7e-10
Identities = 54/296 (18%), Positives = 116/296 (39%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK-KQDAEERRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K A K A+D K +E+
Sbjct: 706 FDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEK 765
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ V E+ + R E+ + D F+ HLD + K + K +
Sbjct: 766 MKD--REALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES 823
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 824 DPRYKAVDSSSMRE--DLFKQYIE--KIAKNLDSEKE-KELERQARIE--ASLREREREV 876
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 877 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 935
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 936 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 987
Score = 74 (31.1 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 30/178 (16%), Positives = 75/178 (42%)
Query: 674 LTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE-ELQKQFQEDKTRIKDAVK 732
++A + W K+ P Y+ + + K +F+ V+ +++ +E K +I A +
Sbjct: 675 VSAFSTWEKELHKIVFDPRYLLL----NPKERKQVFDQYVKTRAEEERREKKNKIMQAKE 730
Query: 733 -LRKITLSSTW----TFEDFKASVLEDATSPPISDV-NLKLIFDDLLIXXXXXXXXXXXX 786
+K+ + + TF +F A +D+ I + + + +F++ +
Sbjct: 731 DFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKT 790
Query: 787 XXXXXXX-FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL 843
FF+LL S + + S W + +E + ++ S+ +F +++ ++
Sbjct: 791 RGEKIKSDFFELL-SNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKI 847
Score = 47 (21.6 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 16 PHQPPMVGSMDPPRGQGGLIMNAGFPSQPLQPP 48
P PP + SM PP G ++ G P P+ P
Sbjct: 98 PFMPPPMSSMPPPPG---MMFPPGMP--PVTAP 125
Score = 47 (21.6 bits), Expect = 2.6e-27, Sum P(5) = 2.6e-27
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 961 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 1008
Score = 47 (21.6 bits), Expect = 7.1e-21, Sum P(5) = 7.1e-21
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 272 AREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPS 307
A A+ S TQ +T P+S S++ P+ V P+
Sbjct: 289 ATSVAQTVSTPTTQDQT-PSSAVSVATPTVSVSTPA 323
Score = 38 (18.4 bits), Expect = 4.8e-09, Sum P(5) = 4.8e-09
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 551 LERERDRKDMFDDHLDELKQ--KERAKAQEER 580
L E + +D ++ + E+K+ KE +EE+
Sbjct: 485 LPMETEEEDPKEEPIKEIKEEPKEEEMTEEEK 516
>WB|WBGene00022855 [details] [associations]
symbol:tcer-1 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0009792 GO:GO:0040007
GO:GO:0002119 GO:GO:0016246 GO:GO:0010171 GO:GO:0040011
GO:GO:0042127 GO:GO:0040035 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0040020 EMBL:FO081697 Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 HSSP:Q61051
GeneTree:ENSGT00530000062987 KO:K12824 UniGene:Cel.18223
GeneID:174150 KEGG:cel:CELE_ZK1127.9 UCSC:ZK1127.9a CTD:174150
NextBio:882743 HOGENOM:HOG000019394 RefSeq:NP_495443.1
ProteinModelPortal:Q95PX7 SMR:Q95PX7 IntAct:Q95PX7 STRING:Q95PX7
PRIDE:Q95PX7 EnsemblMetazoa:ZK1127.9a WormBase:ZK1127.9a
InParanoid:Q95PX7 OMA:LWVETET ArrayExpress:Q95PX7 Uniprot:Q95PX7
Length = 914
Score = 265 (98.3 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 76/258 (29%), Positives = 135/258 (52%)
Query: 387 AEAKNNLSNMSASDLVGASDKVPPPVTEETR----KDAV------RGEKVSDALE---EK 433
AE +NN S S+ SD+ PP +++R K+A+ E+ L+ +
Sbjct: 396 AEEENNQSKKE-SESESESDEDGPPKAKKSRAEKKKEALIAAQKKEKERPRQMLQKPVDP 454
Query: 434 TVEQEHFAYANK----LEAK-NAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGE 488
+E E A + LE + FK +LE NV + T+++ L I+ D+RY +L E
Sbjct: 455 AIEAEMQAAKEREKVPLEERLKQFKEMLEEKNVSTSSTFEKELSKIVFDKRYLSLGAT-E 513
Query: 489 RKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERF 548
R+ F+ + +K + + ERR ++K+A+++++K+L E EL + +S + F D R+
Sbjct: 514 RRACFDAFCREKIESEKAERRKRVKEAKEEFQKLLAEC-ELNGRSSYSSFTSKFGKDPRY 572
Query: 549 KALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQD 608
KA+ER RDR+D F+D + EL +KE+ + + ++++ + K LE + ++W +
Sbjct: 573 KAVERNRDREDAFNDFVGELHKKEKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKK 632
Query: 609 RLEADERCSRLDKMDRLE 626
LE +ER LD E
Sbjct: 633 TLEDEERYIALDSSSTRE 650
Score = 192 (72.6 bits), Expect = 6.6e-17, Sum P(4) = 6.6e-17
Identities = 43/156 (27%), Positives = 81/156 (51%)
Query: 428 DALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTL 486
DA + +E E ++ EAK F+ LL + ++ D RY A+
Sbjct: 519 DAFCREKIESEKAERRKRVKEAKEEFQKLLAECELNGRSSYSSFTSKFGKDPRYKAVERN 578
Query: 487 GERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDE 546
+R+ AFN+++G+ K++ +E+R K +K + + K+LEE LT ++WS E++E
Sbjct: 579 RDREDAFNDFVGELHKKEKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEE 638
Query: 547 RFKALERERDRKDMFDDHLDELKQKERAKAQEERKR 582
R+ AL+ R+ +F + + L + + +EE++R
Sbjct: 639 RYIALDSSSTRESLFREFVANLGDETASDIEEEQER 674
Score = 132 (51.5 bits), Expect = 1.7e-10, Sum P(4) = 1.7e-10
Identities = 55/233 (23%), Positives = 106/233 (45%)
Query: 499 QKKKQDAEER-RLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR 557
+ + Q A+ER ++ L++ +K+MLEE TSST + K ++ D+R+ +L +R
Sbjct: 457 EAEMQAAKEREKVPLEERLKQFKEMLEEKNVSTSST-FEKELSKIVFDKRYLSLGAT-ER 514
Query: 558 KDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCS 617
+ FD E + E+A+ ++ K E++K L C+ + + + + D R
Sbjct: 515 RACFDAFCREKIESEKAERRKRVKEAKEEFQKLLAECE-LNGRSSYSSFTSKFGKDPRYK 573
Query: 618 RLDK-MDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTA 676
+++ DR + F +K E K + F KL+E L T
Sbjct: 574 AVERNRDREDAFNDFVGELHKKEKDEKR------AKKE-KLKAAFVKLLEEQTGL---TR 623
Query: 677 KTNWRDYCIKVKDSPPYMAV-ASNTSGSTPKDLFEDVVEELQKQFQEDKTRIK 728
K+ W ++D Y+A+ +S+T S ++ ++ +E +E++ R K
Sbjct: 624 KSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEEEQEREK 676
Score = 124 (48.7 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 432 EKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYGALRTLGER 489
+KT+E E A L++ + ++L AN+G D T ++R A + R
Sbjct: 631 KKTLEDEERYIA--LDSSSTRESLFREFVANLG-DETASDIEEEQEREKRLAAQTAIANR 687
Query: 490 KTAFNEYLG-QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERF 548
+ LG Q +++ E + K+ + D Y+ +L + ++ T ++ W +A + DER+
Sbjct: 688 QKEVEAELGNQLRERTKESEKQKMGEHEDTYRNLLIDLIKSTENS-WHEARRILRKDERY 746
Query: 549 KALER-ERDRKD-MFDDHLDELKQKER 573
+ ++ RK+ +FDDH+ L++K R
Sbjct: 747 ANCDMLDKTRKESLFDDHIKSLERKRR 773
Score = 112 (44.5 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
W EF +PDGRKYY+N +T+++ W P L + +E AS + QS +Q
Sbjct: 235 WNEFNAPDGRKYYFNSITQENTWEKPKAL-IDQENGGGASPEPVQSAAIAEAQ 286
Score = 107 (42.7 bits), Expect = 1.3e-07, Sum P(3) = 1.3e-07
Identities = 62/272 (22%), Positives = 126/272 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDK---VPPPVTEETRKDAVRGEKVSDAL 430
SSS E++ VA NL + +ASD+ ++ + R+ V E + + L
Sbjct: 645 SSSTRESLFREFVA----NLGDETASDIEEEQEREKRLAAQTAIANRQKEVEAE-LGNQL 699
Query: 431 EEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGE- 488
E+T E E K+ E ++ ++ LL ++ +W +A R + D RY L +
Sbjct: 700 RERTKESEK----QKMGEHEDTYRNLLIDLIKSTENSWHEARRILRKDERYANCDMLDKT 755
Query: 489 -RKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER 547
+++ F++++ + L+ +K R+ + ++L+ ++T RW A + +++E
Sbjct: 756 RKESLFDDHI----------KSLE-RKRREAFFQVLDNHEKITPMMRWRDAKKIIQDEEE 804
Query: 548 -FKAL----ER--ERDRKDMFD---DHL-DELKQK-ERAKAQEERKRNIIEY-RKFLESC 594
F + ER ERD +D + DHL DE K+ K + + ++E + ++
Sbjct: 805 TFVKIASNSERKVERDFRDWQERRHDHLTDEFKEMLSETKIITHKSKKLMEEGEQHMDIL 864
Query: 595 DFIKANTQWRKVQDRLEADERCSRLDKMDRLE 626
++ + +W ++ + A ER L+ D +E
Sbjct: 865 SVLENDKRWVRMT-AMSASERDRMLE--DHIE 893
Score = 96 (38.9 bits), Expect = 2.0e-08, Sum P(5) = 2.0e-08
Identities = 49/239 (20%), Positives = 98/239 (41%)
Query: 505 AEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR-KDMFDD 563
AEE + KK + + E+ +R K + + A ++E++R + M
Sbjct: 396 AEEENNQSKKESESESESDEDGPPKAKKSRAEK-----KKEALIAAQKKEKERPRQMLQK 450
Query: 564 HLDELKQKERAKAQEERK----RNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRL 619
+D + E A+E K + ++++ LE + + ++ + K ++ D+R L
Sbjct: 451 PVDPAIEAEMQAAKEREKVPLEERLKQFKEMLEEKN-VSTSSTFEKELSKIVFDKRYLSL 509
Query: 620 DKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTN 679
+R F K ++ ++EF+KL+ A+ L +++
Sbjct: 510 GATERRACFDAFCREKIESEKAERR-------KRVKEAKEEFQKLL-AECELN---GRSS 558
Query: 680 WRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITL 738
+ + K P Y AV N +D F D V EL K+ +++K K+ +K + L
Sbjct: 559 YSSFTSKFGKDPRYKAVERNRDR---EDAFNDFVGELHKKEKDEKRAKKEKLKAAFVKL 614
Score = 94 (38.1 bits), Expect = 2.8e-23, Sum P(4) = 2.8e-23
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTD 240
W E + DGR+YYFN T+ +TW+KP L+ AS +
Sbjct: 235 WNEFNAPDGRKYYFNSITQENTWEKPKALIDQENGGGASPE 275
Score = 78 (32.5 bits), Expect = 0.00010, Sum P(3) = 0.00010
Identities = 47/189 (24%), Positives = 87/189 (46%)
Query: 415 ETRKDAVRGEKVSDA-LEEKTVEQEHFA-YANKLEAKN--AFKALLES-ANVGSDWTWDQ 469
E R+ + E+ ++ + +KT ++ F + LE K AF +L++ + W
Sbjct: 735 EARRILRKDERYANCDMLDKTRKESLFDDHIKSLERKRREAFFQVLDNHEKITPMMRWRD 794
Query: 470 ALRAIINDRR--YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESV 527
A + II D + + + ERK ++ +D +ERR D++K+ML E+
Sbjct: 795 A-KKIIQDEEETFVKIASNSERKV-------ERDFRDWQERRHD--HLTDEFKEMLSETK 844
Query: 528 ELTSSTR--------WSKAVTMFENDERFKALER----ERDRKDMFDDHLDELKQKERAK 575
+T ++ +++ END+R+ + ERDR M +DH++ L +K
Sbjct: 845 IITHKSKKLMEEGEQHMDILSVLENDKRWVRMTAMSASERDR--MLEDHIENLGRKGTPP 902
Query: 576 --AQEERKR 582
Q+ER R
Sbjct: 903 PPTQQERDR 911
Score = 76 (31.8 bits), Expect = 1.9e-21, Sum P(4) = 1.9e-21
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
W E + +G+KY+Y+ V + + W P K+ Q E A + +E N +
Sbjct: 168 WVETETAEGKKYFYHPVNRNTIWERPQNAKIVT-QPELAQLIHRATEEEKNRE 219
Score = 65 (27.9 bits), Expect = 2.5e-20, Sum P(4) = 2.5e-20
Identities = 23/85 (27%), Positives = 39/85 (45%)
Query: 194 EGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPF--------ELMTTIERADASTDWKEFT 245
EG Q W E +A+G++Y+++ R + W++P EL I RA +E
Sbjct: 163 EG-QELWVETETAEGKKYFYHPVNRNTIWERPQNAKIVTQPELAQLIHRATEEEKNREER 221
Query: 246 SPDGRKYYYNKVTKQSKWSLPDELK 270
P G+ N ++++ PD K
Sbjct: 222 MPHGQ-IPQNPDDAWNEFNAPDGRK 245
Score = 60 (26.2 bits), Expect = 1.0e-11, Sum P(4) = 1.0e-11
Identities = 25/118 (21%), Positives = 50/118 (42%)
Query: 189 QPKSAEGVQ-TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSP 247
+P S+ V T W + D + +++N T+ S W++P + T R D + SP
Sbjct: 338 RPISSTPVSGTPWCVVWTGDDKVFFYNPSTKCSVWERPPD---TYGREDVDKLVQNPPSP 394
Query: 248 DGRKYYYNKVTKQSKWSL------PDELKLAREQAEKASIKGTQSETSPNSQTSISFP 299
+ N+ K+S+ P + K +R + +K ++ Q + + + P
Sbjct: 395 KAEEEN-NQSKKESESESESDEDGPPKAKKSRAEKKKEALIAAQKKEKERPRQMLQKP 451
Score = 60 (26.2 bits), Expect = 2.0e-08, Sum P(5) = 2.0e-08
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL-KEQAKD 849
F LL ++ S W ++ LE + + ++ S +F EFV L E A D
Sbjct: 611 FVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVANLGDETASD 667
Score = 47 (21.6 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 20/95 (21%), Positives = 40/95 (42%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
+KK D + + ++ S R + ++A D +E E+++ ++R+K
Sbjct: 630 TKKTLEDEERYIALDSSSTRESLFREFVANLGDETASDIEEEQEREKRLAAQTAIANRQK 689
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHED 985
E E E ++ R + +K G+HED
Sbjct: 690 --------EVEAELGNQLRERTKESEKQKMGEHED 716
Score = 45 (20.9 bits), Expect = 6.6e-25, Sum P(4) = 6.6e-25
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQE-FSSIGDES 830
FF +L + ++I+ W + +++++ +E F I S
Sbjct: 776 FFQVLDNHEKITPMMRWRDAKKIIQDEEETFVKIASNS 813
Score = 40 (19.1 bits), Expect = 2.1e-24, Sum P(4) = 2.1e-24
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 902 DSAENDSKRSGKDNDKK--HRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPE 959
D + K S D+ K RKR ++ LD +EK P D KK +
Sbjct: 750 DMLDKTRKESLFDDHIKSLERKRREAFFQVLDNHEKI---TPMMRWRDAKKIIQDEEETF 806
Query: 960 SENESRHKRH-RRDNRNGSRKNGDH 983
+ S +R RD R+ + DH
Sbjct: 807 VKIASNSERKVERDFRDWQERRHDH 831
Score = 39 (18.8 bits), Expect = 2.7e-24, Sum P(4) = 2.7e-24
Identities = 12/59 (20%), Positives = 29/59 (49%)
Query: 907 DSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESR 965
D+K+ +D ++ K ++ ++ + +D + H H +D K L+ T ++S+
Sbjct: 794 DAKKIIQDEEETFVKIASNSERKVERDFRDWQERRHDHLTDEFK-EMLSETKIITHKSK 851
Score = 37 (18.1 bits), Expect = 4.1e-25, Sum P(4) = 4.1e-25
Identities = 10/22 (45%), Positives = 11/22 (50%)
Query: 19 PPMVGSMDPP-RGQGGLIMNAG 39
PP G PP RG G+ N G
Sbjct: 103 PPGRGGYMPPYRGGYGVAPNGG 124
>SGD|S000001495 [details] [associations]
symbol:PRP40 "U1 snRNP protein involved in splicing"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IMP] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0071004 "U2-type
prespliceosome" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0005685 "U1 snRNP" evidence=IDA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IDA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
SGD:S000001495 EMBL:BK006944 GO:GO:0003723 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0000398 EMBL:S53418 GO:GO:0071004
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SMART:SM00441
SUPFAM:SSF81698 GO:GO:0005685 KO:K12821 eggNOG:COG5104
GeneTree:ENSGT00530000062987 OrthoDB:EOG41VPBS EMBL:Z28012
PIR:S30014 RefSeq:NP_012913.3 RefSeq:NP_012915.3 PDB:1O6W PDB:2B7E
PDB:2KFD PDBsum:1O6W PDBsum:2B7E PDBsum:2KFD
ProteinModelPortal:P33203 SMR:P33203 DIP:DIP-1620N IntAct:P33203
MINT:MINT-386201 STRING:P33203 PaxDb:P33203 EnsemblFungi:YKL012W
GeneID:853857 GeneID:853859 KEGG:sce:YKL010C KEGG:sce:YKL012W
CYGD:YKL012w HOGENOM:HOG000001088 KO:K10590 OMA:DDDPLWK
EvolutionaryTrace:P33203 NextBio:975100 Genevestigator:P33203
GermOnline:YKL012W Uniprot:P33203
Length = 583
Score = 171 (65.3 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 32/79 (40%), Positives = 45/79 (56%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
WKE A GR YY+N T+ STW+KP EL++ E WK + DG+ YYYN T+
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTR 63
Query: 260 QSKWSLPDELKLAREQAEK 278
++ W++P K AE+
Sbjct: 64 ETSWTIPAFEKKVEPIAEQ 82
Score = 166 (63.5 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 68/313 (21%), Positives = 132/313 (42%)
Query: 433 KTVEQEHFAYAN--KL---------EAKNAFKALLESANVGSDWTWDQALRAI-INDRRY 480
+T+ +E YAN KL EA+ F +L+ V S W++ + + + D RY
Sbjct: 109 RTINEEESQYANNSKLLNVRRRTKEEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRY 168
Query: 481 GALRTLGE-RKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAV 539
+ +K F +YL + + + K ++ ++KML+ + + TRW A
Sbjct: 169 WMVDDDPLWKKEMFEKYLSNRSADQLLKEHNETSKFKEAFQKMLQNNSHIKYYTRWPTAK 228
Query: 540 TMFENDERFK-ALERERDRKDMFDDHLDEL--KQKE-RAKAQEERKRNIIEYRKFLESCD 595
+ ++ +K ++ E+ ++ F D++D L QKE + K + + + + EY + +
Sbjct: 229 RLIADEPIYKHSVVNEKTKRQTFQDYIDTLIDTQKESKKKLKTQALKELREYLNGIITTS 288
Query: 596 FIKANTQWRKVQD--------RLEADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXX 647
+ W+++ + R A+ L D L +
Sbjct: 289 SSETFITWQQLLNHYVFDKSKRYMANRHFKVLTHEDVLNEYLKIVNTIENDLQNKLNELR 348
Query: 648 XXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKD 707
+R RD F+ L+ +V + + A T W D +K P ++ + +GS+ D
Sbjct: 349 LRNYTRDRIARDNFKSLLR-EVPI-KIKANTRWSDIYPHIKSDPRFLHMLGR-NGSSCLD 405
Query: 708 LFEDVVEELQKQF 720
LF D V+E Q+ +
Sbjct: 406 LFLDFVDE-QRMY 417
Score = 77 (32.2 bits), Expect = 4.5e-14, Sum P(3) = 4.5e-14
Identities = 37/171 (21%), Positives = 77/171 (45%)
Query: 426 VSDALEEKTVEQEHFAYANKLEAKNAFKALLESA--NVGSDWTWDQALRAIINDRRYGAL 483
+ + L+ K E Y A++ FK+LL + ++ W I +D R+ L
Sbjct: 336 IENDLQNKLNELRLRNYTRDRIARDNFKSLLREVPIKIKANTRWSDIYPHIKSDPRF--L 393
Query: 484 RTLGERKTA----FNEYLGQKKKQDAEERRLKLKKARD-DYKKMLEESVELTSSTRWSKA 538
LG ++ F +++ +++ +R + + D +++ +S E+T
Sbjct: 394 HMLGRNGSSCLDLFLDFVDEQRMYIFAQRSIAQQTLIDQNFEWNDADSDEITKQN----I 449
Query: 539 VTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRK 589
+ END +F +++E D + D + + +K + K Q ER+ I+E +K
Sbjct: 450 EKVLENDRKFDKVDKE-DISLIVDGLIKQRNEKIQQKLQNERR--ILEQKK 497
Score = 76 (31.8 bits), Expect = 2.0e-13, Sum P(3) = 2.0e-13
Identities = 14/32 (43%), Positives = 20/32 (62%)
Query: 197 QTDWKEHTSADGRRYYFNKRTRVSTWDKP-FE 227
+ WK +ADG+ YY+N TR ++W P FE
Sbjct: 42 ENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 73
Score = 61 (26.5 bits), Expect = 3.4e-23, Sum P(3) = 3.4e-23
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 808 STWENCRQLLEGSQEFSSIGDE-SICRGVFDEF 839
STW+ + L S E+ ++GDE +I R +F++F
Sbjct: 517 STWDLASKELGESLEYKALGDEDNIRRQIFEDF 549
Score = 60 (26.2 bits), Expect = 2.4e-12, Sum P(3) = 2.4e-12
Identities = 26/96 (27%), Positives = 45/96 (46%)
Query: 656 KNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEE 715
K ++ F+K+++ + + T W + D P Y N T + F+D ++
Sbjct: 203 KFKEAFQKMLQNN---SHIKYYTRWPTAKRLIADEPIYKHSVVNEK--TKRQTFQDYIDT 257
Query: 716 LQKQFQEDKTRIK-DAVK-LRK-----ITLSSTWTF 744
L +E K ++K A+K LR+ IT SS+ TF
Sbjct: 258 LIDTQKESKKKLKTQALKELREYLNGIITTSSSETF 293
Score = 38 (18.4 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 915 NDKKHRKRHQSAHDSLDENEKDRSK 939
N+K R+ Q D+L + +K+ K
Sbjct: 243 NEKTKRQTFQDYIDTLIDTQKESKK 267
>UNIPROTKB|F1RM10 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 KO:K12824 OMA:MEEMNED EMBL:CU462939
EMBL:FP015780 RefSeq:XP_003354387.2 Ensembl:ENSSSCT00000015755
GeneID:100621703 KEGG:ssc:100621703 Uniprot:F1RM10
Length = 1068
Score = 239 (89.2 bits), Expect = 3.6e-23, Sum P(4) = 3.6e-23
Identities = 62/224 (27%), Positives = 122/224 (54%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDW 465
PV + RK K D+ +E +E E A + LEA+ FK +L V +
Sbjct: 592 PVKAKKRKRD--DNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFS 649
Query: 466 TWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
TW++ L I+ D RY L ERK F++Y+ + +++ E++ K+ +A++D+KKM+EE
Sbjct: 650 TWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEE 708
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNII 585
+ + +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 709 A-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKS 767
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMD-RLEIF 628
++ + L + + + ++W KV+D++E+D R +D R ++F
Sbjct: 768 DFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF 810
Score = 198 (74.8 bits), Expect = 1.0e-18, Sum P(4) = 1.0e-18
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E A T+ + D R+ A
Sbjct: 673 KQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKA 732
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 733 IEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNH-HLDSQSRWSKVKDKV 791
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E+D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 792 ESDPRYKAVDSSSMREDLFKQYIEKMAKNLDSEKEKELERQARIEASLREREREVQKARS 851
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 852 EQTKEIDR 859
Score = 135 (52.6 bits), Expect = 1.3e-11, Sum P(3) = 1.3e-11
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKVSDALEE 432
SSS+ E + + + NL + +L + ++ + E R+ R E+ + E
Sbjct: 802 SSSMREDLFKQYIEKMAKNLDSEKEKELERQA-RIEASLREREREVQKARSEQTKEIDRE 860
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY--GALRTLGERK 490
+ ++H + EA FKALL SD +W R + D R+ G+L E++
Sbjct: 861 R---EQH----KREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE 913
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--- 547
FNE++ KK R+ ++++L+E+ +T ++ W + + + D R
Sbjct: 914 KLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIK 962
Query: 548 FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ESCDFIKANTQWRK 605
F + +R++ R+ F++++ + + AKA R +++ KF+ S I+ + Q K
Sbjct: 963 FSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRSKKLIQESDQHLK 1015
Query: 606 -VQDRLEADERCSRLD 620
V+ L+ D+R LD
Sbjct: 1016 DVEKILQNDKRYLVLD 1031
Score = 127 (49.8 bits), Expect = 9.4e-11, Sum P(3) = 9.4e-11
Identities = 36/144 (25%), Positives = 70/144 (48%)
Query: 485 TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFE 543
+L ER+ + ++ K+ D E + K ++A ++K +L + V +S WS
Sbjct: 838 SLREREREVQKARSEQTKEIDREREQHKREEAIQNFKALLSDMVR-SSDVSWSDTRRTLR 896
Query: 544 NDERFKA---LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN 600
D R+++ LERE K +F++H++ L +K+R +R+ L+ I
Sbjct: 897 KDHRWESGSLLEREEKEK-LFNEHIEALTKKKRE-----------HFRQLLDETSAITLT 944
Query: 601 TQWRKVQDRLEADERCSRLDKMDR 624
+ W++V+ ++ D RC + DR
Sbjct: 945 STWKEVKKIIKEDPRCIKFSSSDR 968
Score = 126 (49.4 bits), Expect = 4.8e-11, Sum P(4) = 4.8e-11
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 621 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 678
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E F T + + + D R ++KM
Sbjct: 679 YVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRAT-FSEFAAKHAKDSRFKAIEKMK 737
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ L +++ W
Sbjct: 738 DREALFNEFVAAARKKEKED--------SKTRGEKIKSDFFELLSNH----HLDSQSRWS 785
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 786 KVKDKVESDPRYKAVDSS---SMREDLFKQYIEKMAKNLDSEKEK 827
Score = 111 (44.1 bits), Expect = 3.6e-23, Sum P(4) = 3.6e-23
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKAS--IKGTQSET 288
T+ A A ++W E+ + DG+ YYYN T +S W P ELK + EK IK E
Sbjct: 395 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEP 454
Query: 289 SP 290
P
Sbjct: 455 LP 456
Score = 106 (42.4 bits), Expect = 1.2e-22, Sum P(4) = 1.2e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 403 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 433
Score = 105 (42.0 bits), Expect = 1.5e-22, Sum P(4) = 1.5e-22
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
W E +PDG+ YYYN T++S W+ PD +K+ +Q+E + Q++ +Q
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVQAQAQ 188
Score = 80 (33.2 bits), Expect = 5.1e-20, Sum P(4) = 5.1e-20
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T W + D R +++N TR+S WD+P +L I RAD K P +K +
Sbjct: 502 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRADVD---KIIQEPPHKKGM--EE 553
Query: 258 TKQSKWSLPDELKLAREQAEKASIKGTQ 285
K+ + P L + + Q ++IK Q
Sbjct: 554 VKKLRHPTPTMLSIQKWQFSMSAIKEEQ 581
Score = 75 (31.5 bits), Expect = 5.7e-06, Sum P(4) = 5.7e-06
Identities = 53/236 (22%), Positives = 95/236 (40%)
Query: 513 KKARDDYKKMLEESVELTSSTRWSKAVTMFEN----------DERFKALERERD-RKDMF 561
KK ++ KK+ + + S +W +++ + DE KA +R+RD KD+
Sbjct: 548 KKGMEEVKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPVKAKKRKRDDNKDI- 606
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCS 617
D E + KA ER +E R +F + + A + W K ++ D R
Sbjct: 607 -DSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYL 665
Query: 618 RLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALG 672
L+ +R ++F + E+KN+ ++F+K+ME
Sbjct: 666 LLNPKERKQVFDQYVKTRAEE------------ERREKKNKIMQAKEDFKKMMEE----A 709
Query: 673 TLTAKTNWRDYCIK-VKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ + ++ K KDS + A+ LF + V +K+ +ED KTR
Sbjct: 710 KFNPRATFSEFAAKHAKDSR-FKAIEKMKDREA---LFNEFVAAARKKEKEDSKTR 761
Score = 74 (31.1 bits), Expect = 5.2e-05, Sum P(4) = 5.2e-05
Identities = 30/178 (16%), Positives = 75/178 (42%)
Query: 674 LTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE-ELQKQFQEDKTRIKDAVK 732
++A + W K+ P Y+ + + K +F+ V+ +++ +E K +I A +
Sbjct: 645 VSAFSTWEKELHKIVFDPRYLLL----NPKERKQVFDQYVKTRAEEERREKKNKIMQAKE 700
Query: 733 -LRKITLSSTW----TFEDFKASVLEDATSPPISDV-NLKLIFDDLLIXXXXXXXXXXXX 786
+K+ + + TF +F A +D+ I + + + +F++ +
Sbjct: 701 DFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKT 760
Query: 787 XXXXXXX-FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL 843
FF+LL S + + S W + +E + ++ S+ +F +++ ++
Sbjct: 761 RGEKIKSDFFELL-SNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKM 817
Score = 73 (30.8 bits), Expect = 8.9e-06, Sum P(4) = 8.9e-06
Identities = 54/296 (18%), Positives = 116/296 (39%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK-KQDAEERRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K A K A+D K +E+
Sbjct: 676 FDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEK 735
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ V E+ + R E+ + D F+ HLD + K + K +
Sbjct: 736 MKD--REALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES 793
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 794 DPRYKAVDSSSMRE--DLFKQYIE--KMAKNLDSEKE-KELERQARIE--ASLREREREV 846
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 847 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 905
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 906 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 957
Score = 51 (23.0 bits), Expect = 3.6e-23, Sum P(4) = 3.6e-23
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 16 PHQPPMVGSMDPPRGQ---GGL--IMNAGFPSQP 44
P PP +G+M PP G G+ + AG P+ P
Sbjct: 98 PFMPPPMGTMPPPPGMMFPPGMPPVTAAGAPALP 131
Score = 47 (21.6 bits), Expect = 3.6e-23, Sum P(4) = 3.6e-23
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 931 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 978
Score = 44 (20.5 bits), Expect = 2.2e-16, Sum P(4) = 2.2e-16
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 272 AREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPS 307
A ++ S TQ +T P+S S++ P+ V P+
Sbjct: 259 ASSVSQTVSTPTTQDQT-PSSAVSVATPTVSVSTPA 293
Score = 38 (18.4 bits), Expect = 5.2e-05, Sum P(4) = 5.2e-05
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 551 LERERDRKDMFDDHLDELKQ--KERAKAQEER 580
L E + +D ++ + E+K+ KE +EE+
Sbjct: 455 LPMETEEEDPKEEPIKEIKEEPKEEEMTEEEK 486
>UNIPROTKB|F1MKU9 [details] [associations]
symbol:TCERG1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0001106 "RNA polymerase II transcription corepressor activity"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IEA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 CTD:10915 KO:K12824 OMA:MEEMNED
EMBL:DAAA02020555 IPI:IPI01001763 RefSeq:XP_002689326.1
RefSeq:XP_002704921.2 UniGene:Bt.109736 Ensembl:ENSBTAT00000061039
GeneID:540964 KEGG:bta:540964 NextBio:20878935 ArrayExpress:F1MKU9
Uniprot:F1MKU9
Length = 1062
Score = 239 (89.2 bits), Expect = 4.4e-23, Sum P(4) = 4.4e-23
Identities = 62/224 (27%), Positives = 122/224 (54%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDW 465
PV + RK K D+ +E +E E A + LEA+ FK +L V +
Sbjct: 586 PVKAKKRKRD--DNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFS 643
Query: 466 TWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
TW++ L I+ D RY L ERK F++Y+ + +++ E++ K+ +A++D+KKM+EE
Sbjct: 644 TWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEE 702
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNII 585
+ + +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 703 A-KFNPRVTFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKS 761
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMD-RLEIF 628
++ + L + + + ++W KV+D++E+D R +D R ++F
Sbjct: 762 DFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF 804
Score = 198 (74.8 bits), Expect = 1.3e-18, Sum P(4) = 1.3e-18
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E A T+ + D R+ A
Sbjct: 667 KQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRVTFSEFAAKHAKDSRFKA 726
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 727 IEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNH-HLDSQSRWSKVKDKV 785
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E+D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 786 ESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARS 845
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 846 EQTKEIDR 853
Score = 135 (52.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKVSDALEE 432
SSS+ E + + + NL + +L + ++ + E R+ R E+ + E
Sbjct: 796 SSSMREDLFKQYIEKIAKNLDSEKEKELERQA-RIEASLREREREVQKARSEQTKEIDRE 854
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY--GALRTLGERK 490
+ ++H + EA FKALL SD +W R + D R+ G+L E++
Sbjct: 855 R---EQH----KREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE 907
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--- 547
FNE++ KK R+ ++++L+E+ +T ++ W + + + D R
Sbjct: 908 KLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIK 956
Query: 548 FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ESCDFIKANTQWRK 605
F + +R++ R+ F++++ + + AKA R +++ KF+ S I+ + Q K
Sbjct: 957 FSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRSKKLIQESDQHLK 1009
Query: 606 -VQDRLEADERCSRLD 620
V+ L+ D+R LD
Sbjct: 1010 DVEKILQNDKRYLVLD 1025
Score = 129 (50.5 bits), Expect = 7.2e-11, Sum P(3) = 7.2e-11
Identities = 54/231 (23%), Positives = 105/231 (45%)
Query: 414 EETRKDAVRGEKV-SDALE----EKTVEQEHFAYA-NKLEAKNAFKALLESANVGSDWTW 467
+E RGEK+ SD E Q ++ +K+E+ +KA+ +S+++ D +
Sbjct: 747 KEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAV-DSSSMRED-LF 804
Query: 468 DQALRAIIND---------RRYGALR-TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKAR 516
Q + I + R + +L ER+ + ++ K+ D E + K ++A
Sbjct: 805 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI 864
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKA---LERERDRKDMFDDHLDELKQKER 573
++K +L + V +S WS D R+++ LERE K +F++H++ L +K+R
Sbjct: 865 QNFKALLSDMVR-SSDVSWSDTRRTLRKDHRWESGSLLEREEKEK-LFNEHIEALTKKKR 922
Query: 574 AKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
+R+ L+ I + W++V+ ++ D RC + DR
Sbjct: 923 E-----------HFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDR 962
Score = 126 (49.4 bits), Expect = 5.9e-11, Sum P(4) = 5.9e-11
Identities = 54/225 (24%), Positives = 96/225 (42%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 615 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 672
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E F + + + D R ++KM
Sbjct: 673 YVKTRAEEERREKKNKIMQAKEDFKKMMEEAKF-NPRVTFSEFAAKHAKDSRFKAIEKMK 731
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ L +++ W
Sbjct: 732 DREALFNEFVAAARKKEKED--------SKTRGEKIKSDFFELLSNH----HLDSQSRWS 779
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 780 KVKDKVESDPRYKAVDSS---SMREDLFKQYIEKIAKNLDSEKEK 821
Score = 111 (44.1 bits), Expect = 4.4e-23, Sum P(4) = 4.4e-23
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKAS--IKGTQSET 288
T+ A A ++W E+ + DG+ YYYN T +S W P ELK + EK IK E
Sbjct: 389 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLEEKIKEPIKEPSEEP 448
Query: 289 SP 290
P
Sbjct: 449 LP 450
Score = 106 (42.4 bits), Expect = 1.4e-22, Sum P(4) = 1.4e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 397 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 427
Score = 105 (42.0 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
W E +PDG+ YYYN T++S W+ PD +K+ +Q+E + Q++ +Q
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVQAQAQ 188
Score = 80 (33.2 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T W + D R +++N TR+S WD+P +L I RAD K P +K +
Sbjct: 496 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRADVD---KIIQEPPHKKGM--EE 547
Query: 258 TKQSKWSLPDELKLAREQAEKASIKGTQ 285
K+ + P L + + Q ++IK Q
Sbjct: 548 VKKLRHPTPTMLSIQKWQFSMSAIKEEQ 575
Score = 75 (31.5 bits), Expect = 6.9e-06, Sum P(4) = 6.9e-06
Identities = 53/236 (22%), Positives = 95/236 (40%)
Query: 513 KKARDDYKKMLEESVELTSSTRWSKAVTMFEN----------DERFKALERERD-RKDMF 561
KK ++ KK+ + + S +W +++ + DE KA +R+RD KD+
Sbjct: 542 KKGMEEVKKLRHPTPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPVKAKKRKRDDNKDI- 600
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCS 617
D E + KA ER +E R +F + + A + W K ++ D R
Sbjct: 601 -DSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYL 659
Query: 618 RLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALG 672
L+ +R ++F + E+KN+ ++F+K+ME
Sbjct: 660 LLNPKERKQVFDQYVKTRAEE------------ERREKKNKIMQAKEDFKKMMEE----A 703
Query: 673 TLTAKTNWRDYCIK-VKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ + ++ K KDS + A+ LF + V +K+ +ED KTR
Sbjct: 704 KFNPRVTFSEFAAKHAKDSR-FKAIEKMKDREA---LFNEFVAAARKKEKEDSKTR 755
Score = 74 (31.1 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 30/178 (16%), Positives = 75/178 (42%)
Query: 674 LTAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVE-ELQKQFQEDKTRIKDAVK 732
++A + W K+ P Y+ + + K +F+ V+ +++ +E K +I A +
Sbjct: 639 VSAFSTWEKELHKIVFDPRYLLL----NPKERKQVFDQYVKTRAEEERREKKNKIMQAKE 694
Query: 733 -LRKITLSSTW----TFEDFKASVLEDATSPPISDV-NLKLIFDDLLIXXXXXXXXXXXX 786
+K+ + + TF +F A +D+ I + + + +F++ +
Sbjct: 695 DFKKMMEEAKFNPRVTFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKT 754
Query: 787 XXXXXXX-FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEFVTQL 843
FF+LL S + + S W + +E + ++ S+ +F +++ ++
Sbjct: 755 RGEKIKSDFFELL-SNHHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLFKQYIEKI 811
Score = 71 (30.1 bits), Expect = 1.7e-05, Sum P(4) = 1.7e-05
Identities = 53/296 (17%), Positives = 115/296 (38%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK-KQDAEERRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K K A+D K +E+
Sbjct: 670 FDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRVTFSEFAAKHAKDSRFKAIEK 729
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ V E+ + R E+ + D F+ HLD + K + K +
Sbjct: 730 MKD--REALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES 787
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 788 DPRYKAVDSSSMRE--DLFKQYIE--KIAKNLDSEKE-KELERQARIE--ASLREREREV 840
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 841 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 899
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 900 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 951
Score = 50 (22.7 bits), Expect = 4.4e-23, Sum P(4) = 4.4e-23
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 16 PHQPPMVGSMDPPRGQGGLIMNAGFPSQPLQPP 48
P PP +G+M PP G ++ G P P+ P
Sbjct: 98 PFMPPPMGTMPPPPG---MMFPPGMP--PVTAP 125
Score = 47 (21.6 bits), Expect = 4.4e-23, Sum P(4) = 4.4e-23
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 925 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 972
Score = 44 (20.5 bits), Expect = 2.7e-16, Sum P(4) = 2.7e-16
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 272 AREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPS 307
A ++ S TQ +T P+S S++ P+ V P+
Sbjct: 253 ASSVSQTVSTPTTQDQT-PSSAVSVATPTVSVSTPA 287
Score = 38 (18.4 bits), Expect = 6.3e-05, Sum P(4) = 6.3e-05
Identities = 9/32 (28%), Positives = 18/32 (56%)
Query: 551 LERERDRKDMFDDHLDELKQ--KERAKAQEER 580
L E + +D ++ + E+K+ KE +EE+
Sbjct: 449 LPMETEEEDPKEEPIKEIKEEPKEEEMTEEEK 480
>RGD|1311748 [details] [associations]
symbol:Tcerg1 "transcription elongation regulator 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001103 "RNA polymerase II repressing transcription factor
binding" evidence=ISO] [GO:0001106 "RNA polymerase II transcription
corepressor activity" evidence=ISO] [GO:0070064 "proline-rich
region binding" evidence=ISO] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 RGD:1311748
GO:GO:0001106 Gene3D:2.20.70.10 SUPFAM:SSF51045 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 CTD:10915 KO:K12824 OMA:MEEMNED
OrthoDB:EOG40CHGM IPI:IPI00367866 RefSeq:NP_001100860.2
Ensembl:ENSRNOT00000025467 GeneID:307474 KEGG:rno:307474
UCSC:RGD:1311748 ArrayExpress:D3ZTL0 Uniprot:D3ZTL0
Length = 1081
Score = 238 (88.8 bits), Expect = 4.9e-23, Sum P(4) = 4.9e-23
Identities = 61/224 (27%), Positives = 122/224 (54%)
Query: 411 PVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDW 465
P+ + RK K D+ +E +E E A + LEA+ FK +L V +
Sbjct: 605 PIKAKKRKRD--DNKDIDSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFS 662
Query: 466 TWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
TW++ L I+ D RY L ERK F++Y+ + +++ E++ K+ +A++D+KKM+EE
Sbjct: 663 TWEKELHKIVFDPRYLLLNPK-ERKQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEE 721
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNII 585
+ + +S+ D RFKA+E+ +DR+ +F++ + ++KE+ ++ ++
Sbjct: 722 A-KFNPRATFSEFAAKHAKDSRFKAIEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKS 780
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMD-RLEIF 628
++ + L + + + ++W KV+D++E+D R +D R ++F
Sbjct: 781 DFFELLSN-HHLDSQSRWSKVKDKVESDPRYKAVDSSSMREDLF 823
Score = 198 (74.8 bits), Expect = 1.1e-18, Sum P(4) = 1.1e-18
Identities = 49/188 (26%), Positives = 96/188 (51%)
Query: 424 EKVSDALEEKTVEQEHFAYANKL-EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGA 482
++V D + E+E NK+ +AK FK ++E A T+ + D R+ A
Sbjct: 686 KQVFDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKA 745
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ + +R+ FNE++ +K++ E+ + + +K + D+ ++L L S +RWSK
Sbjct: 746 IEKMKDREALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNH-HLDSQSRWSKVKDKV 804
Query: 543 ENDERFKALERERDRKDMFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
E+D R+KA++ R+D+F +++++ K + K +E ++ IE + KA +
Sbjct: 805 ESDPRYKAVDSSSMREDLFKQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARS 864
Query: 602 QWRKVQDR 609
+ K DR
Sbjct: 865 EQTKEIDR 872
Score = 135 (52.6 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 61/256 (23%), Positives = 119/256 (46%)
Query: 374 SSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRK-DAVRGEKVSDALEE 432
SSS+ E + + + NL + +L + ++ + E R+ R E+ + E
Sbjct: 815 SSSMREDLFKQYIEKIAKNLDSEKEKELERQA-RIEASLREREREVQKARSEQTKEIDRE 873
Query: 433 KTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY--GALRTLGERK 490
+ ++H + EA FKALL SD +W R + D R+ G+L E++
Sbjct: 874 R---EQH----KREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWESGSLLEREEKE 926
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--- 547
FNE++ KK R+ ++++L+E+ +T ++ W + + + D R
Sbjct: 927 KLFNEHI-----------EALTKKKREHFRQLLDETSAITLTSTWKEVKKIIKEDPRCIK 975
Query: 548 FKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL--ESCDFIKANTQWRK 605
F + +R++ R+ F++++ + + AKA R +++ KF+ S I+ + Q K
Sbjct: 976 FSSSDRKKQRE--FEEYIRD--KYITAKADF---RTLLKETKFITYRSKKLIQESDQHLK 1028
Query: 606 -VQDRLEADERCSRLD 620
V+ L+ D+R LD
Sbjct: 1029 DVEKILQNDKRYLVLD 1044
Score = 129 (50.5 bits), Expect = 6.0e-11, Sum P(3) = 6.0e-11
Identities = 54/231 (23%), Positives = 105/231 (45%)
Query: 414 EETRKDAVRGEKV-SDALE----EKTVEQEHFAYA-NKLEAKNAFKALLESANVGSDWTW 467
+E RGEK+ SD E Q ++ +K+E+ +KA+ +S+++ D +
Sbjct: 766 KEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVESDPRYKAV-DSSSMRED-LF 823
Query: 468 DQALRAIIND---------RRYGALR-TLGERKTAFNEYLGQKKKQ-DAEERRLKLKKAR 516
Q + I + R + +L ER+ + ++ K+ D E + K ++A
Sbjct: 824 KQYIEKIAKNLDSEKEKELERQARIEASLREREREVQKARSEQTKEIDREREQHKREEAI 883
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKA---LERERDRKDMFDDHLDELKQKER 573
++K +L + V +S WS D R+++ LERE K +F++H++ L +K+R
Sbjct: 884 QNFKALLSDMVR-SSDVSWSDTRRTLRKDHRWESGSLLEREEKEK-LFNEHIEALTKKKR 941
Query: 574 AKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
+R+ L+ I + W++V+ ++ D RC + DR
Sbjct: 942 E-----------HFRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSSSDR 981
Score = 126 (49.4 bits), Expect = 5.1e-11, Sum P(4) = 5.1e-11
Identities = 55/225 (24%), Positives = 97/225 (43%)
Query: 505 AEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDD 563
A ER + +AR +K ML E ST W K + D R+ L ++RK +FD
Sbjct: 634 ARERAIVPLEARMKQFKDMLLERGVSAFST-WEKELHKIVFDPRYLLLN-PKERKQVFDQ 691
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM- 622
++ ++ER + + + + +++K +E F T + + + D R ++KM
Sbjct: 692 YVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRAT-FSEFAAKHAKDSRFKAIEKMK 750
Query: 623 DRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTE-RKNRDEFRKLMEADVALGTLTAKTNWR 681
DR +F SKT K + +F +L+ L +++ W
Sbjct: 751 DREALFNEFVAAARKKEKED--------SKTRGEKIKSDFFELLSNH----HLDSQSRWS 798
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTR 726
KV+ P Y AV S+ S +DLF+ +E++ K +K +
Sbjct: 799 KVKDKVESDPRYKAVDSS---SMREDLFKQYIEKIAKNLDSEKEK 840
Score = 111 (44.1 bits), Expect = 4.9e-23, Sum P(4) = 4.9e-23
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 231 TIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKAS--IKGTQSET 288
T+ A A ++W E+ + DG+ YYYN T +S W P ELK + EK IK E
Sbjct: 408 TLAGATAVSEWTEYKTADGKTYYYNNRTLESTWEKPQELKEKEKLDEKIKEPIKEASEEP 467
Query: 289 SP 290
P
Sbjct: 468 LP 469
Score = 106 (42.4 bits), Expect = 1.6e-22, Sum P(4) = 1.6e-22
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFEL 228
++W E+ +ADG+ YY+N RT STW+KP EL
Sbjct: 416 SEWTEYKTADGKTYYYNNRTLESTWEKPQEL 446
Score = 105 (42.0 bits), Expect = 2.0e-22, Sum P(4) = 2.0e-22
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
W E +PDG+ YYYN T++S W+ PD +K+ +Q+E + Q++ +Q
Sbjct: 137 WVENKTPDGKVYYYNARTRESAWTKPDGVKVI-QQSELTPMLAAQAQVQAQAQ 188
Score = 79 (32.9 bits), Expect = 8.7e-20, Sum P(4) = 8.7e-20
Identities = 26/88 (29%), Positives = 41/88 (46%)
Query: 198 TDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKV 257
T W + D R +++N TR+S WD+P +L I RAD K P +K +
Sbjct: 515 TPWCVVWTGDERVFFYNPTTRLSMWDRPDDL---IGRADVD---KIIQEPPHKKGLEDM- 567
Query: 258 TKQSKWSLPDELKLAREQAEKASIKGTQ 285
K+ + P L + + Q ++IK Q
Sbjct: 568 -KKLRHPAPTMLSIQKWQFSMSAIKEEQ 594
Score = 79 (32.9 bits), Expect = 2.5e-06, Sum P(4) = 2.5e-06
Identities = 54/236 (22%), Positives = 95/236 (40%)
Query: 513 KKARDDYKKMLEESVELTSSTRWSKAVTMFEN----------DERFKALERERD-RKDMF 561
KK +D KK+ + + S +W +++ + DE KA +R+RD KD+
Sbjct: 561 KKGLEDMKKLRHPAPTMLSIQKWQFSMSAIKEEQELMEEMNEDEPIKAKKRKRDDNKDI- 619
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYR--KFLESC--DFIKANTQWRKVQDRLEADERCS 617
D E + KA ER +E R +F + + A + W K ++ D R
Sbjct: 620 -DSEKEAAMEAEIKAARERAIVPLEARMKQFKDMLLERGVSAFSTWEKELHKIVFDPRYL 678
Query: 618 RLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNR-----DEFRKLMEADVALG 672
L+ +R ++F + E+KN+ ++F+K+ME
Sbjct: 679 LLNPKERKQVFDQYVKTRAEE------------ERREKKNKIMQAKEDFKKMMEE----A 722
Query: 673 TLTAKTNWRDYCIK-VKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED-KTR 726
+ + ++ K KDS + A+ LF + V +K+ +ED KTR
Sbjct: 723 KFNPRATFSEFAAKHAKDSR-FKAIEKMKDREA---LFNEFVAAARKKEKEDSKTR 774
Score = 75 (31.5 bits), Expect = 6.0e-06, Sum P(4) = 6.0e-06
Identities = 54/296 (18%), Positives = 116/296 (39%)
Query: 467 WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKK-KQDAEERRLKLKKARDDYKKMLEE 525
+DQ ++ + R + + K F + + + K A K A+D K +E+
Sbjct: 689 FDQYVKTRAEEERREKKNKIMQAKEDFKKMMEEAKFNPRATFSEFAAKHAKDSRFKAIEK 748
Query: 526 SVELTSSTRWSKAVTMFENDERFKALER-ERDRKDMFD----DHLDELKQ--KERAKAQE 578
+ +++ V E+ + R E+ + D F+ HLD + K + K +
Sbjct: 749 MKD--REALFNEFVAAARKKEKEDSKTRGEKIKSDFFELLSNHHLDSQSRWSKVKDKVES 806
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLEIFXXXXXXXXXX 638
+ + ++ E D K + K+ L++++ L++ R+E
Sbjct: 807 DPRYKAVDSSSMRE--DLFKQYIE--KIAKNLDSEKE-KELERQARIE--ASLREREREV 859
Query: 639 XXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMAVAS 698
+ E+ R+E + +A ++ ++ +W D ++ + + S
Sbjct: 860 QKARSEQTKEIDREREQHKREEAIQNFKALLSDMVRSSDVSWSDTRRTLRKDHRWES-GS 918
Query: 699 NTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDFKASVLED 754
+ LF + +E L K+ +E ++ D ITL+STW ++ K + ED
Sbjct: 919 LLEREEKEKLFNEHIEALTKKKREHFRQLLDETSA--ITLTSTW--KEVKKIIKED 970
Score = 51 (23.0 bits), Expect = 4.9e-23, Sum P(4) = 4.9e-23
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 16 PHQPPMVGSMDPPRGQ---GGLIMNAGFPSQPLQPP 48
P PP +G+M PP G G+ P P PP
Sbjct: 98 PFMPPPMGAMPPPPGMMFPPGMPPGTA-PGAPALPP 132
Score = 51 (23.0 bits), Expect = 5.9e-17, Sum P(4) = 5.9e-17
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 272 AREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPS 307
A A+ S TQ +T P+S S++ P+ V AP+
Sbjct: 272 ATSVAQTVSTPTTQDQT-PSSAVSVATPTVSVSAPA 306
Score = 47 (21.6 bits), Expect = 4.9e-23, Sum P(4) = 4.9e-23
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQ---EFSSIGDESICRGVFDEFV 840
F LL I+ TSTW+ +++++ +FSS D R F+E++
Sbjct: 944 FRQLLDETSAITLTSTWKEVKKIIKEDPRCIKFSS-SDRKKQRE-FEEYI 991
>FB|FBgn0261641 [details] [associations]
symbol:CG42724 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0006354 "DNA-dependent transcription, elongation"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 EMBL:AE014297 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0071011 GO:GO:0000398 GO:GO:0071013 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
HSSP:Q61051 GeneTree:ENSGT00530000062987 UniGene:Dm.2280
GeneID:40785 KEGG:dme:Dmel_CG42724 FlyBase:FBgn0261641
GenomeRNAi:40785 NextBio:820572 EMBL:AY069106 RefSeq:NP_001189186.1
RefSeq:NP_788585.1 SMR:Q9VI14 MINT:MINT-794860
EnsemblMetazoa:FBtr0303014 EnsemblMetazoa:FBtr0303017
UCSC:CG33097-RA InParanoid:Q9VI14 Uniprot:Q9VI14
Length = 763
Score = 205 (77.2 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 48/165 (29%), Positives = 94/165 (56%)
Query: 414 EETRKDAVRGEKVSDALEEKTVEQEHFAYANK----LEAK-NAFKALLESANVGSDWTWD 468
EE VR S E+ +E E A + LE + FK +L +V + TW+
Sbjct: 548 EEVPTKRVRMISKSKRAEDAALEAEQRAAKERALVPLEMRVTQFKEMLREKDVSAFSTWE 607
Query: 469 QALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVE 528
+ L I+ D RY L T ERK F +Y+ + +++ +E+R K+++ R+D++ ++EE+
Sbjct: 608 KELHKIVFDPRY-LLLTSKERKQVFEKYVKDRAEEERKEKRNKMRQKREDFRSLMEEA-R 665
Query: 529 LTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKER 573
L + +S+ DER++A+E+ R+R+ +F++++ E++++E+
Sbjct: 666 LHGKSSFSEFSQRNAKDERYRAIEKVRERESLFNEYIVEVRRREK 710
Score = 116 (45.9 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 54/240 (22%), Positives = 114/240 (47%)
Query: 400 DLVGASDKVPPPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKA--LLE 457
DL+ D V V E + EK ++A E+K+ E+ AN+ +AK+ +A L +
Sbjct: 470 DLLNRED-VDKAVNERPEQLKTPQEKSAEA-EQKSGEE-----ANQEQAKSQVQAQQLDQ 522
Query: 458 SANVGSDWTWDQALRAIINDRRYGA-------LRTLGERKTAFNEYLGQKKKQDAEERRL 510
V +D D + I + +R + + K A + L + +++ A+ER L
Sbjct: 523 VQRVDADDDDDDEVIKIRTESESSVEEVPTKRVRMISKSKRAEDAAL-EAEQRAAKERAL 581
Query: 511 -KLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELK 569
L+ +K+ML E ++++ + W K + D R+ L ++RK +F+ ++ +
Sbjct: 582 VPLEMRVTQFKEMLREK-DVSAFSTWEKELHKIVFDPRYLLLT-SKERKQVFEKYVKDRA 639
Query: 570 QKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKM-DRLEIF 628
++ER + + + ++ ++R +E + + + + R DER ++K+ +R +F
Sbjct: 640 EEERKEKRNKMRQKREDFRSLMEEAR-LHGKSSFSEFSQRNAKDERYRAIEKVRERESLF 698
Score = 108 (43.1 bits), Expect = 1.9e-09, Sum P(3) = 1.9e-09
Identities = 28/101 (27%), Positives = 54/101 (53%)
Query: 412 VTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNA-FKALLESANVGSDWTWDQA 470
+T + RK + V D EE+ E+ NK+ K F++L+E A + ++ +
Sbjct: 622 LTSKERKQVFE-KYVKDRAEEERKEKR-----NKMRQKREDFRSLMEEARLHGKSSFSEF 675
Query: 471 LRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLK 511
+ D RY A+ + ER++ FNEY+ + ++++ E++ LK
Sbjct: 676 SQRNAKDERYRAIEKVRERESLFNEYIVEVRRREKEDKLLK 716
Score = 95 (38.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 21/64 (32%), Positives = 38/64 (59%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLPD--ELKLARE-QAEKASIKGTQS-ETSPNS-QTS 295
W E + DGR YYY+ VT+++ WS PD +K+ + + E+ + + Q+ +T + +TS
Sbjct: 117 WVETKAEDGRSYYYHAVTRETTWSRPDGPAVKIMTQAEVEEMAKRPAQAAKTEAKAGETS 176
Query: 296 ISFP 299
+ P
Sbjct: 177 VEIP 180
Score = 85 (35.0 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 20/71 (28%), Positives = 33/71 (46%)
Query: 238 STDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSE--TSPNSQTS 295
+ +W E +PDGR YY++ +S W P L+ E A A+ G T+P+
Sbjct: 294 AAEWSEHRAPDGRPYYFHAGRGESVWEKPQALR-DMEAARMAAHSGVAPAVATAPSGLPP 352
Query: 296 ISFPSSVVKAP 306
P+ ++ P
Sbjct: 353 HLLPNPMMHMP 363
Score = 84 (34.6 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 23/106 (21%), Positives = 49/106 (46%)
Query: 191 KSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERAD-ASTDWKEFTSPDG 249
K+A+ + + +A+ +R ++ + + K + + A T W + D
Sbjct: 392 KAAQAAALEKEAKKAAEEKRKKEEEQKKAAASAKQTDKSRPVTSTPIAGTPWCVVWTGDS 451
Query: 250 RKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTS 295
R ++YN T+ S W P++L L RE +KA + + +P +++
Sbjct: 452 RVFFYNPSTRTSVWDRPEDL-LNREDVDKAVNERPEQLKTPQEKSA 496
Score = 83 (34.3 bits), Expect = 6.5e-16, Sum P(3) = 6.5e-16
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERA 235
+W EH + DGR YYF+ S W+KP + + +E A
Sbjct: 296 EWSEHRAPDGRPYYFHAGRGESVWEKP-QALRDMEAA 331
Score = 79 (32.9 bits), Expect = 6.6e-20, Sum P(3) = 6.6e-20
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 190 PKSAEGVQTD---WKEHTSADGRRYYFNKRTRVSTWDKP 225
P A GV W E + DGR YY++ TR +TW +P
Sbjct: 104 PSGANGVTGPPEIWVETKAEDGRSYYYHAVTRETTWSRP 142
Score = 76 (31.8 bits), Expect = 3.9e-15, Sum P(4) = 3.9e-15
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 173 DEQMXXXXXXXXXXXXQPKSAEGVQ-TDWKEHTSADGRRYYFNKRTRVSTWDKPFELM 229
+EQ +P ++ + T W + D R +++N TR S WD+P +L+
Sbjct: 415 EEQKKAAASAKQTDKSRPVTSTPIAGTPWCVVWTGDSRVFFYNPSTRTSVWDRPEDLL 472
Score = 70 (29.7 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 37/184 (20%), Positives = 78/184 (42%)
Query: 562 DDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDK 621
D L+ ++ + +A + + ++++ L D + A + W K ++ D R L
Sbjct: 566 DAALEAEQRAAKERALVPLEMRVTQFKEMLREKD-VSAFSTWEKELHKIVFDPRYLLLTS 624
Query: 622 MDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTLTAKTNWR 681
+R ++F +K +K R++FR LME L K+++
Sbjct: 625 KERKQVFEKYVKDRAEEERKEKR------NKMRQK-REDFRSLMEE----ARLHGKSSFS 673
Query: 682 DYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKD---AVKLR-KIT 737
++ + Y A+ + LF + + E++++ +EDK K+ A +L+ K T
Sbjct: 674 EFSQRNAKDERYRAIEKVRERES---LFNEYIVEVRRREKEDKLLKKEQPLASRLQHKCT 730
Query: 738 LSST 741
+T
Sbjct: 731 TQNT 734
Score = 42 (19.8 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 9 PYSGAQVPHQPPMVGSMDPPRGQGGLIMNAGFPSQPLQPP 48
P S PP + S PP L+ P+ QPP
Sbjct: 181 PVSSHLTSQPPPHLMSQPPPNAAAPLLSQPP-PNVRQQPP 219
Score = 40 (19.1 bits), Expect = 6.1e-16, Sum P(4) = 6.1e-16
Identities = 9/16 (56%), Positives = 10/16 (62%)
Query: 77 LPNAQPSNHIPPSSLP 92
LPN P H+PP S P
Sbjct: 355 LPN--PMMHMPPGSGP 368
>UNIPROTKB|H0YG38 [details] [associations]
symbol:PRPF40A "Pre-mRNA-processing factor 40 homolog A"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
GO:GO:0005634 Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AC079344
EMBL:AC012443 HGNC:HGNC:16463 ChiTaRS:PRPF40A
Ensembl:ENST00000493468 Bgee:H0YG38 Uniprot:H0YG38
Length = 346
Score = 235 (87.8 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 50/122 (40%), Positives = 73/122 (59%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRK 251
+A G ++ W EH S DGR YY+N T+ STW+KP +L T E+ + WKE+ S G+
Sbjct: 131 TASGAKSMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKP 190
Query: 252 YYYNKVTKQSKWSLPDELK-L-AREQAEKASIKG--TQSETSPNSQTSISFPSSVVKAPS 307
YYYN TK+S+W+ P EL+ L A +AE++S + T + T+P T I S + A
Sbjct: 191 YYYNSQTKESRWAKPKELEDLEAMIKAEESSKQEECTTTSTAPVPTTEIPTTMSTMAAAE 250
Query: 308 SA 309
+A
Sbjct: 251 AA 252
Score = 47 (21.6 bits), Expect = 4.5e-18, Sum P(2) = 4.5e-18
Identities = 20/75 (26%), Positives = 31/75 (41%)
Query: 361 PKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLV-GASDKVPPPVTEETRKD 419
P T+ +A ++ + A A A N ++ SAS+ V G VP P
Sbjct: 240 PTTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSASNTVSGTVPVVPEPEVTSIVAT 299
Query: 420 AVRGEK-VSDALEEK 433
V E V+ + EE+
Sbjct: 300 VVDNENTVTISTEEQ 314
>CGD|CAL0003333 [details] [associations]
symbol:orf19.3250 species:5476 "Candida albicans" [GO:0005685
"U1 snRNP" evidence=IEA] [GO:0071004 "U2-type prespliceosome"
evidence=IEA] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020
SMART:SM00456 CGD:CAL0003333 Gene3D:2.20.70.10 SUPFAM:SSF51045
EMBL:AACQ01000049 EMBL:AACQ01000048 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
KO:K12821 InterPro:IPR027237 PANTHER:PTHR11864:SF0 eggNOG:COG5104
RefSeq:XP_717875.1 RefSeq:XP_717941.1 ProteinModelPortal:Q5A878
STRING:Q5A878 GeneID:3640384 GeneID:3640462 KEGG:cal:CaO19.10760
KEGG:cal:CaO19.3250 Uniprot:Q5A878
Length = 602
Score = 207 (77.9 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 82/395 (20%), Positives = 180/395 (45%)
Query: 360 FPKTVDAIAPMIDVSSSIGEAVTDNTVAE-AKNNLSNMSASDLVGASD-KVPPPVTEETR 417
FP+T + + P+ + +I + T E ++ + + G + + P + EE
Sbjct: 29 FPETEETL-PVSEKQETITTSTTTGKWEEYTTDDGKKYYYNAITGETTWEKPNEIIEEEL 87
Query: 418 KDAVRGEK--VSD---ALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALR 472
+ EK +S+ L+ K VE EAK +F LL V S W++ +
Sbjct: 88 SNEKLAEKTELSELDKTLKSKPVELTGPTSKTDNEAKQSFLKLLSDNKVNSTWSFQAVME 147
Query: 473 AIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLE--ESVEL- 529
+++ Y +++ RK + EYL K + + + L L+ + ++ + L E+ L
Sbjct: 148 NLVDKPEYWSVKDPVTRKQLYEEYLVSKFQSELSNKSLLLENFKRNFNEELRKLEAKNLV 207
Query: 530 TSSTRWS--KAVTMFENDERFK-ALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIE 586
T +TRW K + + +++ FK ++ + + +F ++ D+L+++ Q ++ + +IE
Sbjct: 208 TYNTRWITIKKLWIDQDNPIFKHSMMSDSELAAIFYEYTDKLREQHEKLLQTKKNQALIE 267
Query: 587 YRKFLESCD--FIKANTQWRKVQDRLEADERCS------RLDKMDRLEIFXXXXXXXXXX 638
+L + ++ + W + + L D R L K++ L+++
Sbjct: 268 LSTYLRQVNSSLVEKSQTWESLYENLINDSRFQSNKNFQNLTKLNILQLYENEIFPRRID 327
Query: 639 XXXXXXXXXXXXS-KTERKNRDEFRKLM-EADVALGTLTAKTNWRDYCIKVKDSPPYMAV 696
+ + +RK R+ ++KL+ E ++ A T ++D K++++ ++ +
Sbjct: 328 DIKSQITVISKINYRNDRKARESYKKLLGELEI-----DADTEFKDIIDKIENNDAFIEI 382
Query: 697 ASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAV 731
+GS+ +LF D+V+E +KQ + K + D+V
Sbjct: 383 CGR-NGSSALELFWDIVDE-KKQILKVKKNLVDSV 415
Score = 158 (60.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 35/118 (29%), Positives = 63/118 (53%)
Query: 196 VQTDWKEHTSADGRRYYFNKRTRVSTWDKP--------FELMTTIERADASTDWKEFTSP 247
+ +DW+E + G YY+N +T ++W P E TI + + W+E+T+
Sbjct: 1 MSSDWEELRTETGEVYYYNYKTNETSWTFPETEETLPVSEKQETITTSTTTGKWEEYTTD 60
Query: 248 DGRKYYYNKVTKQSKWSLPDEL---KLAREQ-AEKASIKGTQSETSPNSQTSISFPSS 301
DG+KYYYN +T ++ W P+E+ +L+ E+ AEK + +T + ++ P+S
Sbjct: 61 DGKKYYYNAITGETTWEKPNEIIEEELSNEKLAEKTELSELD-KTLKSKPVELTGPTS 117
Score = 84 (34.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 55/261 (21%), Positives = 104/261 (39%)
Query: 432 EKTVEQ-EHFAYANKLEAKNAFKALLESAN---VGSDWTWDQALRAIINDRRYGA----- 482
+K EQ E K +A L N V TW+ +IND R+ +
Sbjct: 247 DKLREQHEKLLQTKKNQALIELSTYLRQVNSSLVEKSQTWESLYENLINDSRFQSNKNFQ 306
Query: 483 -LRTLGERKTAFNEYLGQK----KKQDAEERRLKLK---KARDDYKKMLEESVELTSSTR 534
L L + NE ++ K Q ++ + KAR+ YKK+L E +E+ + T
Sbjct: 307 NLTKLNILQLYENEIFPRRIDDIKSQITVISKINYRNDRKARESYKKLLGE-LEIDADTE 365
Query: 535 WSKAVTMFENDERFKAL--ERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLE 592
+ + EN++ F + ++F D +DE KQ + K +N+++ +
Sbjct: 366 FKDIIDKIENNDAFIEICGRNGSSALELFWDIVDEKKQILKVK------KNLVD--SVIS 417
Query: 593 SCDFIKANTQWRKVQDRLEADE---RCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXX 649
+ NT K+ + LE + +R +++ L++
Sbjct: 418 TMK--NGNTYDEKMWESLETFSNALKSTRDERLANLDLTLGDGGKGKEITMIYTSLKEEF 475
Query: 650 XSKTERKNRDEFRKLMEADVA 670
K +++ R+++ K M+ D+A
Sbjct: 476 ELKKQQE-REKYLKKMDEDIA 495
Score = 63 (27.2 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 53/237 (22%), Positives = 95/237 (40%)
Query: 360 FPKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKD 419
FP+ +D I I V S I D E+ L D A + + + D
Sbjct: 322 FPRRIDDIKSQITVISKINYR-NDRKARESYKKLLGELEID---ADTEFKDIIDKIENND 377
Query: 420 A---VRGEKVSDALEE--KTVEQEHFAYANKLEAKNAFKALLESANVGSD--W----TWD 468
A + G S ALE V+++ K ++ + +++ N + W T+
Sbjct: 378 AFIEICGRNGSSALELFWDIVDEKKQILKVKKNLVDSVISTMKNGNTYDEKMWESLETFS 437
Query: 469 QALRAIINDRRYGALRTLGER---KTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE 525
AL++ ++R TLG+ K Y K EE LK ++ R+ Y K ++E
Sbjct: 438 NALKSTRDERLANLDLTLGDGGKGKEITMIYTSLK-----EEFELKKQQEREKYLKKMDE 492
Query: 526 SVELTSSTRWSKAVTMFEND----ERFKALERER---DRKDMFDDHLDELKQKERAK 575
++ RW +++ND E F +E R + ++D ++L + ++ K
Sbjct: 493 --DIAKLARW-----IYDNDRNLGENFLRMEGTRFVISNRVNYEDEYEKLSKFDQFK 542
Score = 56 (24.8 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 39/219 (17%), Positives = 90/219 (41%)
Query: 425 KVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGAL- 483
++ D + TV + Y N +A+ ++K LL + +D + + I N+ + +
Sbjct: 325 RIDDIKSQITVISK-INYRNDRKARESYKKLLGELEIDADTEFKDIIDKIENNDAFIEIC 383
Query: 484 -RTLGERKTAFNEYLGQKK-----KQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSK 537
R F + + +KK K++ + + K + Y + + ES+E S+ S
Sbjct: 384 GRNGSSALELFWDIVDEKKQILKVKKNLVDSVISTMKNGNTYDEKMWESLETFSNALKST 443
Query: 538 AVTMFEN-DERFKALERERDRKDMFDDHLDEL---KQKERAKAQEERKRNIIEYRKFLES 593
N D + ++ ++ +E KQ+ER K ++ +I + +++
Sbjct: 444 RDERLANLDLTLGDGGKGKEITMIYTSLKEEFELKKQQEREKYLKKMDEDIAKLARWIYD 503
Query: 594 CD------FIKANTQWRKVQDRLEADERCSRLDKMDRLE 626
D F++ + +R+ ++ +L K D+ +
Sbjct: 504 NDRNLGENFLRMEGTRFVISNRVNYEDEYEKLSKFDQFK 542
>WB|WBGene00022853 [details] [associations]
symbol:ZK1127.6 species:6239 "Caenorhabditis elegans"
[GO:0000003 "reproduction" evidence=IMP] [GO:0016246 "RNA
interference" evidence=IMP] GO:GO:0016246 GO:GO:0000003
EMBL:FO081697 Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846
SMART:SM00441 SUPFAM:SSF81698 GeneTree:ENSGT00530000062987
PIR:E88196 RefSeq:NP_495441.1 ProteinModelPortal:Q23398 SMR:Q23398
STRING:Q23398 PaxDb:Q23398 EnsemblMetazoa:ZK1127.6.1
EnsemblMetazoa:ZK1127.6.2 GeneID:174149 KEGG:cel:CELE_ZK1127.6
UCSC:ZK1127.6.1 CTD:174149 WormBase:ZK1127.6 eggNOG:NOG283575
InParanoid:Q23398 OMA:HECKFIT NextBio:882739 Uniprot:Q23398
Length = 424
Score = 184 (69.8 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 39/136 (28%), Positives = 72/136 (52%)
Query: 447 EAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAE 506
EAK F LL + ++ D RY A+ +R+ AFN+++G+ K++ +
Sbjct: 48 EAKEEFPKLLAECELNGRSSYSSFTSKFGKDPRYKAVERNRDREDAFNDFVGELHKKEKD 107
Query: 507 ERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLD 566
E+R K +K + + K+LEE LT ++WS E++ER+ AL+ R+ +F + +
Sbjct: 108 EKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRESLFREFVA 167
Query: 567 ELKQKERAKAQEERKR 582
L + + +EE++R
Sbjct: 168 NLGDETASDIEEEQER 183
Score = 169 (64.5 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 37/118 (31%), Positives = 66/118 (55%)
Query: 509 RLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDEL 568
R + K+A++++ K+L E EL + +S + F D R+KA+ER RDR+D F+D + EL
Sbjct: 43 RKRAKEAKEEFPKLLAEC-ELNGRSSYSSFTSKFGKDPRYKAVERNRDREDAFNDFVGEL 101
Query: 569 KQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDRLE 626
+KE+ + + ++++ + K LE + ++W + LE +ER LD E
Sbjct: 102 HKKEKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEERYIALDSSSTRE 159
Score = 124 (48.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 38/147 (25%), Positives = 74/147 (50%)
Query: 432 EKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYGALRTLGER 489
+KT+E E A L++ + ++L AN+G D T ++R A + R
Sbjct: 140 KKTLEDEERYIA--LDSSSTRESLFREFVANLG-DETASDIEEEQEREKRLAAQTAIANR 196
Query: 490 KTAFNEYLG-QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERF 548
+ LG Q +++ E + K+ + D Y+ +L + ++ T ++ W +A + DER+
Sbjct: 197 QKEVEAELGNQLRERTKESEKQKMGEHEDTYRNLLIDLIKSTENS-WHEARRILRKDERY 255
Query: 549 KALER-ERDRKD-MFDDHLDELKQKER 573
+ ++ RK+ +FDDH+ L++K R
Sbjct: 256 ANCDMLDKTRKESLFDDHIKSLERKRR 282
Score = 45 (20.9 bits), Expect = 7.1e-11, Sum P(2) = 7.1e-11
Identities = 9/38 (23%), Positives = 21/38 (55%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQE-FSSIGDES 830
FF +L + ++I+ W + +++++ +E F I S
Sbjct: 285 FFQVLDNHEKITPMMRWRDAKKIIQDEEETFVKIASNS 322
Score = 40 (19.1 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 23/85 (27%), Positives = 33/85 (38%)
Query: 902 DSAENDSKRSGKDNDKK--HRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPE 959
D + K S D+ K RKR ++ LD +EK P D KK +
Sbjct: 259 DMLDKTRKESLFDDHIKSLERKRREAFFQVLDNHEKI---TPMMRWRDAKKIIQDEEETF 315
Query: 960 SENESRHKRH-RRDNRNGSRKNGDH 983
+ S +R RD R+ + DH
Sbjct: 316 VKIASNSERKVERDFRDWQERRHDH 340
Score = 39 (18.8 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 12/59 (20%), Positives = 29/59 (49%)
Query: 907 DSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESR 965
D+K+ +D ++ K ++ ++ + +D + H H +D K L+ T ++S+
Sbjct: 303 DAKKIIQDEEETFVKIASNSERKVERDFRDWQERRHDHLTDEFK-EMLSETKIITHKSK 360
>MGI|MGI:109568 [details] [associations]
symbol:Wbp4 "WW domain binding protein 4" species:10090 "Mus
musculus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IDA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070064 "proline-rich region binding"
evidence=ISO] InterPro:IPR000690 InterPro:IPR001202
InterPro:IPR003604 InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451
SMART:SM00456 EMBL:AF071184 MGI:MGI:109568 GO:GO:0005886
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0003676 EMBL:CH466535 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0045292 CTD:11193 eggNOG:NOG125287 HOGENOM:HOG000067962
HOVERGEN:HBG053152 KO:K13220 OrthoDB:EOG4R7VBT OMA:HEEVDLE
EMBL:AK019160 EMBL:AK135215 EMBL:AK160559 EMBL:AK162009
EMBL:BC034851 IPI:IPI00117019 PIR:S64714 RefSeq:NP_061235.2
UniGene:Mm.476813 ProteinModelPortal:Q61048 SMR:Q61048
STRING:Q61048 PhosphoSite:Q61048 PaxDb:Q61048 PRIDE:Q61048
Ensembl:ENSMUST00000022601 GeneID:22380 KEGG:mmu:22380
GeneTree:ENSGT00390000013956 InParanoid:Q3TUU8 ChiTaRS:WBP4
NextBio:302741 Bgee:Q61048 CleanEx:MM_WBP4 Genevestigator:Q61048
GermOnline:ENSMUSG00000022023 Uniprot:Q61048
Length = 376
Score = 152 (58.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 29/78 (37%), Positives = 40/78 (51%)
Query: 191 KSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGR 250
K E + W E +ADG YY++ T S W+KP +++ A W E S DG
Sbjct: 120 KKKEASKGGWVEGVTADGHCYYYDLITGASQWEKPEGFQGNLKKTAAKAVWVEGLSEDGY 179
Query: 251 KYYYNKVTKQSKWSLPDE 268
YYYN T +SKW P++
Sbjct: 180 TYYYNTETGESKWEKPED 197
Score = 65 (27.9 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
Identities = 27/115 (23%), Positives = 56/115 (48%)
Query: 893 KDGADSD-HDDSAENDSKRSGKDNDK------KHRKRHQSAHDSLD-ENEKDRS---KNP 941
+D SD H DS E + K++G+ + + K +++++S + E +K++S +NP
Sbjct: 219 EDAKSSDSHSDS-EGEQKKAGEASTETKKLIIKFKEKNKSTEKRIGPEIQKEKSTPKQNP 277
Query: 942 HRHNSDRKKPRRLASTPESE-NESRHKRHRRDNRNGSRKNGDHEDLEDGEYG-GE 994
N ++ K + ++ P E E + + ++ + + + E L E G GE
Sbjct: 278 SNTNEEKPKTLKKSTNPYGEWQEIKQEAESQEEVDLELPSTEGECLSTSEAGVGE 332
Score = 48 (22.0 bits), Expect = 7.6e-08, Sum P(2) = 7.6e-08
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 562 DDHLD-ELKQKERAKAQEERKRNIIEYRK 589
D H D E +QK+ +A E K+ II++++
Sbjct: 225 DSHSDSEGEQKKAGEASTETKKLIIKFKE 253
>MGI|MGI:1917821 [details] [associations]
symbol:Tcerg1l "transcription elongation regulator 1-like"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001202
Pfam:PF00397 PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456
MGI:MGI:1917821 SUPFAM:SSF51045 eggNOG:NOG307751 Gene3D:1.10.10.440
InterPro:IPR002713 Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698
GeneTree:ENSGT00530000062987 EMBL:AC127598 EMBL:AC127287
EMBL:AK017700 EMBL:BC048631 EMBL:BC107234 EMBL:BC107235
IPI:IPI00224840 IPI:IPI00404018 IPI:IPI00670719 RefSeq:NP_899112.2
UniGene:Mm.334297 ProteinModelPortal:Q3B807 SMR:Q3B807
PhosphoSite:Q3B807 PRIDE:Q3B807 Ensembl:ENSMUST00000160436
GeneID:70571 KEGG:mmu:70571 UCSC:uc009kez.1 UCSC:uc012fvn.1
CTD:256536 HOGENOM:HOG000170000 HOVERGEN:HBG108553
InParanoid:Q3B807 OMA:LVPIFPH OrthoDB:EOG47D9G3 ChiTaRS:TCERG1L
NextBio:331888 Bgee:Q3B807 CleanEx:MM_TCERG1L Genevestigator:Q3B807
Uniprot:Q3B807
Length = 590
Score = 170 (64.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 50/190 (26%), Positives = 100/190 (52%)
Query: 394 SNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALE-EKTVEQEHFAYANKLEAK-NA 451
S+ S+SD G+ D+ T+ R ++ G D + +K + LE +
Sbjct: 404 SDGSSSD-DGSEDQSVK--TKRNRTESCEGPGPEDTHQVDKGPQTPPPQILLPLEERVTH 460
Query: 452 FKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLK 511
F+ +L V + TW++ L I+ D RY L + ERK F +++ + K++ +ER+ K
Sbjct: 461 FRDMLLERGVSAFSTWEKELHKIVFDPRYLLLNS-EERKQIFEQFVKTRIKEEYKERKSK 519
Query: 512 LKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQK 571
L A++++KK+LEES +++ T + + D+RF+ +++ +D++ F+ + LK++
Sbjct: 520 LLLAKEEFKKLLEES-KVSPRTTFKEFAEKHGRDQRFRLVQKRKDQEHFFNQFILILKKR 578
Query: 572 ERAKAQEERK 581
++ RK
Sbjct: 579 DKENRLRLRK 588
Score = 51 (23.0 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 16/64 (25%), Positives = 24/64 (37%)
Query: 240 DWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFP 299
+W + P+ + ++ N S W P+E L EK Q S + T S P
Sbjct: 150 NWIDKRMPNYKIFFNNPFALDSTWMYPEESVLFHSH-EKTHFLANQVTPSLSRPTPASRP 208
Query: 300 SSVV 303
V
Sbjct: 209 LPTV 212
>FB|FBgn0037255 [details] [associations]
symbol:Fip1 species:7227 "Drosophila melanogaster"
[GO:0005515 "protein binding" evidence=IPI] [GO:0006398 "histone
mRNA 3'-end processing" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] EMBL:AE014297 GO:GO:0005634 GO:GO:0006398
Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846 SUPFAM:SSF81698
eggNOG:COG5213 KO:K14405 InterPro:IPR007854 Pfam:PF05182
GeneTree:ENSGT00530000062987 RefSeq:NP_649476.1 UniGene:Dm.1059
ProteinModelPortal:Q9VN31 IntAct:Q9VN31 MINT:MINT-1547159
STRING:Q9VN31 PaxDb:Q9VN31 PRIDE:Q9VN31 EnsemblMetazoa:FBtr0078928
GeneID:40569 KEGG:dme:Dmel_CG1078 UCSC:CG1078-RA CTD:40569
FlyBase:FBgn0037255 InParanoid:Q9VN31 OMA:FEGAGTI OrthoDB:EOG4G4F64
PhylomeDB:Q9VN31 GenomeRNAi:40569 NextBio:819441
ArrayExpress:Q9VN31 Bgee:Q9VN31 Uniprot:Q9VN31
Length = 701
Score = 123 (48.4 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 30/99 (30%), Positives = 60/99 (60%)
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
+G+R A+++ +++++ +E+ LK + R D+ ML E ++ TRW FE D
Sbjct: 505 MGDRG-AYDD--DRERRRREKEKLLKKDQLRKDFLDMLRERHDIERHTRWYDIKKKFEAD 561
Query: 546 ERFKALERERDRKDMFDDHLDELKQKERAKAQ-EERKRN 583
R++AL+ R++ F+D+L LK+++R + +ER+R+
Sbjct: 562 PRYRALDSSY-REEYFEDYLHLLKEEKRKERDLKERERH 599
Score = 100 (40.3 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLAS 956
D D D E D K KD DK+ K +S S E + R K+ R + R+K R S
Sbjct: 617 DKDKDKDKEKD-KEKDKDKDKEKEKDKES---SRRERSRSREKSSRRKSKSREKDRSERS 672
Query: 957 TPESENESRHKRHRRDNRNGSRKNGDHED 985
+ S + + R + + RK+ + +D
Sbjct: 673 SKSSSSNTGGSSSRSEKKKSHRKDKEEDD 701
Score = 90 (36.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 21/83 (25%), Positives = 37/83 (44%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPE 959
H D + K KD +K K D + +KD+ K + +S R++ R +
Sbjct: 599 HRDKERSRDKDKDKDKEKDKDKDKDKEKDKEKDKDKDKEKEKDKESSRRERSRSREKSSR 658
Query: 960 SENESRHK-RHRRDNRNGSRKNG 981
+++SR K R R +++ S G
Sbjct: 659 RKSKSREKDRSERSSKSSSSNTG 681
Score = 87 (35.7 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 23/93 (24%), Positives = 42/93 (45%)
Query: 907 DSKRSGKDNDKKHRKRHQSAHDSLDEN-EKDRSKNPHRHNS---DRKKPRRLASTPESEN 962
+ KR K+ D K R+RH+ S D++ +KD+ K+ + D++K + E +
Sbjct: 585 EEKR--KERDLKERERHRDKERSRDKDKDKDKEKDKDKDKDKEKDKEKDKDKDKEKEKDK 642
Query: 963 ESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
ES + R SR+ + + E +S
Sbjct: 643 ESSRRERSRSREKSSRRKSKSREKDRSERSSKS 675
Score = 75 (31.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 20/73 (27%), Positives = 38/73 (52%)
Query: 556 DRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADER 615
DR DD ++KE+ +++ +++ ++ + E D I+ +T+W ++ + EAD R
Sbjct: 507 DRGAYDDDRERRRREKEKLLKKDQLRKDFLDMLR--ERHD-IERHTRWYDIKKKFEADPR 563
Query: 616 CSRLDKMDRLEIF 628
LD R E F
Sbjct: 564 YRALDSSYREEYF 576
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 13/58 (22%), Positives = 24/58 (41%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
K+ + + S E S+R K +K +R + S RS+ H D+++
Sbjct: 642 KESSRRERSRSREKSSRRKSKSREKDRSERSSKSSSSNTGGSSSRSEKKKSHRKDKEE 699
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 706 KDLFEDVVEELQKQFQEDKTRIKDAVKLRK 735
KD +D ++ +K +DK + KD R+
Sbjct: 618 KDKDKDKEKDKEKDKDKDKEKEKDKESSRR 647
>UNIPROTKB|F1PCW3 [details] [associations]
symbol:WBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000690 InterPro:IPR001202
InterPro:IPR003604 InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451
SMART:SM00456 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:2.20.70.10 SUPFAM:SSF51045 CTD:11193 KO:K13220
OMA:HEEVDLE GeneTree:ENSGT00390000013956 EMBL:AAEX03013176
RefSeq:XP_534136.2 Ensembl:ENSCAFT00000007742 GeneID:476935
KEGG:cfa:476935 Uniprot:F1PCW3
Length = 371
Score = 147 (56.8 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 36/119 (30%), Positives = 56/119 (47%)
Query: 189 QPKSAEGVQTD-----WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKE 243
QPK + + D W E +++G YY++ T S W++P +++ A T W E
Sbjct: 109 QPKEKKKKKKDPSKGRWVEGITSEGYHYYYDLITGASQWERPEGFQGNLKKTAAKTVWVE 168
Query: 244 FTSPDGRKYYYNKVTKQSKWSLPDEL-----KLAREQAEKASIKGTQSETSPNSQTSIS 297
S DG YYYN T +S+W PD+ L + + S+ GT E+ + S S
Sbjct: 169 GVSEDGYTYYYNTETGESRWEKPDDFIPHSGDLLSSKVNEKSV-GTLEESKSSDSHSDS 226
Score = 65 (27.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 18/77 (23%), Positives = 33/77 (42%)
Query: 901 DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENE-KDRSKNPHRHNSDRKKPRRLASTPE 959
++S +DS S D +++ K S + + K++SKN +K+
Sbjct: 215 EESKSSDS-HSDSDGEEEAEKGEASTETQKPKIKFKEKSKNKETEPETQKEKNVQEQNSS 273
Query: 960 SENESRHKRHRRDNRNG 976
NE + K H++ N G
Sbjct: 274 GPNEEKSKAHKKSNPYG 290
Score = 55 (24.4 bits), Expect = 4.9e-08, Sum P(2) = 4.9e-08
Identities = 18/75 (24%), Positives = 27/75 (36%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS---- 946
SK + SD D E + + + K K + + + E E + KN NS
Sbjct: 217 SKSSDSHSDSDGEEEAEKGEASTETQKPKIKFKEKSKNKETEPETQKEKNVQEQNSSGPN 276
Query: 947 DRKKPRRLASTPESE 961
+ K S P E
Sbjct: 277 EEKSKAHKKSNPYGE 291
>RGD|620033 [details] [associations]
symbol:Wbp4 "WW domain binding protein 4" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005681 "spliceosomal
complex" evidence=IEA;ISO] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=ISO;ISS] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=ISO;ISS] [GO:0070064
"proline-rich region binding" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000690 InterPro:IPR001202
InterPro:IPR003604 InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451
SMART:SM00456 RGD:620033 GO:GO:0005886 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0045292 CTD:11193 eggNOG:NOG125287
HOGENOM:HOG000067962 HOVERGEN:HBG053152 KO:K13220 OrthoDB:EOG4R7VBT
OMA:HEEVDLE GeneTree:ENSGT00390000013956 EMBL:BC089052
IPI:IPI00554046 RefSeq:NP_446218.1 UniGene:Rn.144631
ProteinModelPortal:Q5HZF2 SMR:Q5HZF2 STRING:Q5HZF2
Ensembl:ENSRNOT00000015605 GeneID:114765 KEGG:rno:114765
UCSC:RGD:620033 InParanoid:Q5HZF2 NextBio:618853
Genevestigator:Q5HZF2 GermOnline:ENSRNOG00000011678 Uniprot:Q5HZF2
Length = 374
Score = 155 (59.6 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 30/78 (38%), Positives = 40/78 (51%)
Query: 191 KSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGR 250
K E + W E +ADG YY++ T S W+KP +++ A W E S DG
Sbjct: 118 KKKEASKGRWVEGVTADGHCYYYDLVTGASQWEKPEGFQGNLKKTAAKAIWVEGLSEDGY 177
Query: 251 KYYYNKVTKQSKWSLPDE 268
YYYN T +SKW PD+
Sbjct: 178 TYYYNTETGESKWEKPDD 195
Score = 46 (21.3 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 15/97 (15%), Positives = 44/97 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
S KD ++ D ++ S S D+D + +K +++ ++ K + KN +
Sbjct: 205 SSKD-SEKLPDTLEDSKSSDSHSDSDDEQKKAGEASAETKKLIIKFKEKNKSTEKRIGPE 263
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE 987
++ +TP+ + ++ + + + G+ ++++
Sbjct: 264 IQKEKTTPKQNPSNTNEEKPKTPKKSTNPYGEWQEIK 300
Score = 45 (20.9 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 562 DDHLD-ELKQKERAKAQEERKRNIIEYRK 589
D H D + +QK+ +A E K+ II++++
Sbjct: 223 DSHSDSDDEQKKAGEASAETKKLIIKFKE 251
>UNIPROTKB|G4MWS5 [details] [associations]
symbol:MGG_08329 "DNA replication protein 4" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 Gene3D:2.20.70.10 SUPFAM:SSF51045
EMBL:CM001232 Gene3D:1.10.10.440 InterPro:IPR002713 Pfam:PF01846
SUPFAM:SSF81698 RefSeq:XP_003715736.1 ProteinModelPortal:G4MWS5
EnsemblFungi:MGG_08329T0 GeneID:2678469 KEGG:mgr:MGG_08329
Uniprot:G4MWS5
Length = 567
Score = 107 (42.7 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 31/130 (23%), Positives = 60/130 (46%)
Query: 447 EAKNAFKALLESANVGSDWTWDQALRA--IINDRRYGALRTLGERKTAFNEYLGQKKKQD 504
+A+ FK +L N+ +WD+ + + +D RY L T+ +RK + E+ + K
Sbjct: 296 DARGLFKDMLNDFNINPYSSWDKLIEEGKVFDDPRYTVLTTMKDRKDTWEEWSRDRIKIL 355
Query: 505 AEERRLKLKK-ARDDYKKMLEESVELTSSTRWSKAVTMFENDERFK-ALERERDRKDMFD 562
E+R + KK R Y L E W + ++ + + A ++DR+ +
Sbjct: 356 KEQRAREEKKDPRIPYLAFLHEKAN--PKLYWPEFKRKYKKEGPMRDAGISDKDREKWYR 413
Query: 563 DHLDELKQKE 572
+H++ LK +
Sbjct: 414 EHINRLKMPQ 423
Score = 94 (38.1 bits), Expect = 1.3e-06, Sum P(4) = 1.3e-06
Identities = 36/130 (27%), Positives = 61/130 (46%)
Query: 503 QDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT---MFENDERFKALERERDRKD 559
+ AE L + AR +K ML + + + W K + +F+ D R+ L +DRKD
Sbjct: 285 EGAEGAELSEEDARGLFKDMLND-FNINPYSSWDKLIEEGKVFD-DPRYTVLTTMKDRKD 342
Query: 560 MFDD-HLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQ--WRKVQDRL--EADE 614
+++ D +K + +A+EE+K I Y FL KAN + W + + + E
Sbjct: 343 TWEEWSRDRIKILKEQRAREEKKDPRIPYLAFLHE----KANPKLYWPEFKRKYKKEGPM 398
Query: 615 RCSRLDKMDR 624
R + + DR
Sbjct: 399 RDAGISDKDR 408
Score = 66 (28.3 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 192 SAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKP 225
+A+ + W EH + G YY N T ST+ +P
Sbjct: 15 AAQPLPPGWTEHKAPTGHTYYHNAATGESTYKRP 48
Score = 62 (26.9 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 249 GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIK 282
GR++ YN S W +PD LK + + A I+
Sbjct: 140 GRRFAYNPEKNASYWRIPDRLKAGILELDTARIR 173
Score = 61 (26.5 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLP 266
W E +P G YY+N T +S + P
Sbjct: 23 WTEHKAPTGHTYYHNAATGESTYKRP 48
Score = 57 (25.1 bits), Expect = 5.7e-08, Sum P(4) = 5.7e-08
Identities = 15/59 (25%), Positives = 28/59 (47%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSD-RKKPRRL 954
D +HD AE+++ K+ K K Q L E ++ + ++ R + R++ R L
Sbjct: 486 DGEHDGGAEDEAATKAKEARLKREKAMQDRERVLAEEKRRKERDLARSKAALREQEREL 544
Score = 42 (19.8 bits), Expect = 1.6e-06, Sum P(4) = 1.6e-06
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 572 ERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLE 611
+R KA ++R+R + E ++ E D ++ R+ + LE
Sbjct: 507 KREKAMQDRERVLAEEKRRKER-DLARSKAALREQERELE 545
>UNIPROTKB|Q17QQ6 [details] [associations]
symbol:WBP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070064 "proline-rich region binding" evidence=IEA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005681 "spliceosomal complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000690
InterPro:IPR001202 InterPro:IPR003604 InterPro:IPR013085
Pfam:PF00397 Pfam:PF06220 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS50171 SMART:SM00451 SMART:SM00456 GO:GO:0005886
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0003676 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0045292
CTD:11193 eggNOG:NOG125287 HOGENOM:HOG000067962 HOVERGEN:HBG053152
KO:K13220 OrthoDB:EOG4R7VBT OMA:HEEVDLE
GeneTree:ENSGT00390000013956 EMBL:DAAA02032752 EMBL:DAAA02032753
EMBL:BC118233 IPI:IPI00700299 RefSeq:NP_001068719.1
UniGene:Bt.21949 SMR:Q17QQ6 STRING:Q17QQ6
Ensembl:ENSBTAT00000022129 GeneID:506275 KEGG:bta:506275
InParanoid:Q17QQ6 NextBio:20867534 Uniprot:Q17QQ6
Length = 395
Score = 148 (57.2 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 26/69 (37%), Positives = 38/69 (55%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
W E +++G YY++ T S W+KP +++A T W E S DG YYYN T
Sbjct: 125 WVEGITSEGHHYYYDLITGASQWEKPEGFQGNLKKATGKTVWIEGLSEDGYTYYYNTETG 184
Query: 260 QSKWSLPDE 268
+S+W PD+
Sbjct: 185 ESRWEKPDD 193
Score = 54 (24.1 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 22/97 (22%), Positives = 43/97 (44%)
Query: 891 SKKDGADSDHDDSAENDSKRSG--KDNDK---KHRKRHQSAHDSLDENEKDRSKNPHRHN 945
S +SD + A + K+ + K K ++++++++ E E + KN N
Sbjct: 219 SSDSHGESDGEQEAGKEKKKEEIPTETQKLIIKFKEKNKNSNKRT-EPETQKEKNTQGKN 277
Query: 946 SD---RKKPRRLASTPESE---NESRHKRHRRDNRNG 976
S +KP+ + +S NE + K H++ N G
Sbjct: 278 SSGPSEEKPKEKNTQGKSSSGSNEEKPKAHKKPNPYG 314
Score = 53 (23.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 19/94 (20%), Positives = 36/94 (38%)
Query: 901 DDSAENDSKR-SGKDNDKKHRKRH-QSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTP 958
D E+D ++ +GK+ K+ Q E K+ +K K + S+
Sbjct: 221 DSHGESDGEQEAGKEKKKEEIPTETQKLIIKFKEKNKNSNKRTEPETQKEKNTQGKNSSG 280
Query: 959 ESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYG 992
SE + + K + + +GS + + YG
Sbjct: 281 PSEEKPKEKNTQGKSSSGSNEEKPKAHKKPNPYG 314
Score = 39 (18.8 bits), Expect = 2.2e-06, Sum P(2) = 2.2e-06
Identities = 26/104 (25%), Positives = 44/104 (42%)
Query: 413 TE-ETRKDA-VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQA 470
TE ET+K+ +G+ S EEK E+ ++ + KA + N +W Q
Sbjct: 263 TEPETQKEKNTQGKNSSGPSEEKPKEKNTQGKSSSGSNEEKPKAH-KKPNPYGEW---QE 318
Query: 471 LRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKK 514
++ + L E +A NEY+ + A E +L K+
Sbjct: 319 IKPEVESHEEVDL----ELPSAENEYVSTSEADAAGEPQLVFKE 358
>UNIPROTKB|B7Z4M2 [details] [associations]
symbol:WBP4 "cDNA FLJ52917, highly similar to WW
domain-binding protein 4" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001202
InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 GO:GO:0008270 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AL157877 HOVERGEN:HBG053152 UniGene:Hs.411300
HGNC:HGNC:12739 EMBL:AK297536 IPI:IPI00922785 SMR:B7Z4M2
STRING:B7Z4M2 Ensembl:ENST00000542082 UCSC:uc010tfd.2
Uniprot:B7Z4M2
Length = 355
Score = 138 (53.6 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
W E +++G YY++ + S W+KP +++ T W E S DG YYYN T
Sbjct: 107 WVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETG 166
Query: 260 QSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSS 301
+S+W PD+ + + T S++S S S
Sbjct: 167 ESRWEKPDDFIPHTSDLPSSKVNENSLGTLDESKSSDSHSDS 208
Score = 54 (24.1 bits), Expect = 5.2e-07, Sum P(2) = 5.2e-07
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDK-KHRKRHQSAHDSLD-ENEKDRS-KNPHRHNSD 947
S +DSD + AE + + K K +++++++ D E +K++S + + S+
Sbjct: 201 SSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQNSLGSN 260
Query: 948 RKKPRRLA-STPESE-NESRHK--RHRR-DNRNGSRKNGDHEDLEDGEYGGESR 996
+K + L S P E E + + H D S +N ++ + + GGE +
Sbjct: 261 EEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTEN-EYVSTSEADGGGEPK 313
>UNIPROTKB|O75554 [details] [associations]
symbol:WBP4 "WW domain-binding protein 4" species:9606
"Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0070064 "proline-rich region binding"
evidence=IPI] [GO:0045292 "mRNA cis splicing, via spliceosome"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000690 InterPro:IPR001202
InterPro:IPR003604 InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451
SMART:SM00456 GO:GO:0005886 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0005681 GO:GO:0003676 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0045292 EMBL:AL157877 eggNOG:COG5104
CTD:11193 HOGENOM:HOG000067962 HOVERGEN:HBG053152 KO:K13220
OrthoDB:EOG4R7VBT EMBL:AF071185 EMBL:BC104879 EMBL:BC108310
IPI:IPI00026957 RefSeq:NP_009118.1 UniGene:Hs.411300 PDB:2DK1
PDB:2JXW PDBsum:2DK1 PDBsum:2JXW ProteinModelPortal:O75554
SMR:O75554 MINT:MINT-127038 STRING:O75554 PhosphoSite:O75554
PaxDb:O75554 PRIDE:O75554 Ensembl:ENST00000379487 GeneID:11193
KEGG:hsa:11193 UCSC:uc001uxt.3 GeneCards:GC13P041635
HGNC:HGNC:12739 HPA:HPA038965 MIM:604981 neXtProt:NX_O75554
PharmGKB:PA37350 InParanoid:O75554 OMA:HEEVDLE PhylomeDB:O75554
EvolutionaryTrace:O75554 GenomeRNAi:11193 NextBio:42605
ArrayExpress:O75554 Bgee:O75554 CleanEx:HS_WBP4
Genevestigator:O75554 GermOnline:ENSG00000120688 Uniprot:O75554
Length = 376
Score = 138 (53.6 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 29/102 (28%), Positives = 46/102 (45%)
Query: 200 WKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTK 259
W E +++G YY++ + S W+KP +++ T W E S DG YYYN T
Sbjct: 128 WVEGITSEGYHYYYDLISGASQWEKPEGFQGDLKKTAVKTVWVEGLSEDGFTYYYNTETG 187
Query: 260 QSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSS 301
+S+W PD+ + + T S++S S S
Sbjct: 188 ESRWEKPDDFIPHTSDLPSSKVNENSLGTLDESKSSDSHSDS 229
Score = 54 (24.1 bits), Expect = 6.5e-07, Sum P(2) = 6.5e-07
Identities = 26/114 (22%), Positives = 53/114 (46%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDK-KHRKRHQSAHDSLD-ENEKDRS-KNPHRHNSD 947
S +DSD + AE + + K K +++++++ D E +K++S + + S+
Sbjct: 222 SSDSHSDSDGEQEAEEGGVSTETEKPKIKFKEKNKNSDGGSDPETQKEKSIQKQNSLGSN 281
Query: 948 RKKPRRLA-STPESE-NESRHK--RHRR-DNRNGSRKNGDHEDLEDGEYGGESR 996
+K + L S P E E + + H D S +N ++ + + GGE +
Sbjct: 282 EEKSKTLKKSNPYGEWQEIKQEVESHEEVDLELPSTEN-EYVSTSEADGGGEPK 334
>ZFIN|ZDB-GENE-050522-342 [details] [associations]
symbol:zgc:112384 "zgc:112384" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000690 InterPro:IPR001202 InterPro:IPR003604
InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220 PROSITE:PS01159
PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451 SMART:SM00456
ZFIN:ZDB-GENE-050522-342 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 Gene3D:2.20.70.10 SUPFAM:SSF51045 HOVERGEN:HBG053152
KO:K13220 EMBL:BC095798 IPI:IPI00483634 RefSeq:NP_001018530.1
UniGene:Dr.78282 ProteinModelPortal:Q501Z8 GeneID:553723
KEGG:dre:553723 InParanoid:Q501Z8 NextBio:20880452 Uniprot:Q501Z8
Length = 412
Score = 146 (56.5 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/88 (37%), Positives = 47/88 (53%)
Query: 190 PKSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKP--F--ELMTTI----ERADASTDW 241
P S+ Q W T+ADG YY+N T S W+KP F E +++ ++ + + W
Sbjct: 120 PSSSSRTQA-WVSGTTADGLLYYYNTLTAESQWEKPDGFVDECVSSTAGQTQQESSGSAW 178
Query: 242 KEFTSPDGRKYYYNKVTKQSKWSLPDEL 269
E SPDG YYYN + +S W P+EL
Sbjct: 179 MEAVSPDGFTYYYNTESGESSWEKPEEL 206
Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 404 ASDKVPPPVTEETRKDAVRG--EKVSDALEEKTVEQE 438
+SD V PP + RK+ ++ S A E T E +
Sbjct: 207 SSDDVSPPGVDSPRKEIESAALDRSSPAQPEHTAEDK 243
>UNIPROTKB|B4DJ96 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 UniGene:Hs.130293 HGNC:HGNC:24309
ChiTaRS:LUC7L3 EMBL:AC005921 EMBL:AK295983 IPI:IPI00966213
STRING:B4DJ96 Ensembl:ENST00000544170 UCSC:uc010wmw.2
Uniprot:B4DJ96
Length = 356
Score = 97 (39.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS ++ R +R +HD + + RS++ R S
Sbjct: 221 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 280
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE 984
DRK K R + E + +S+ K R D++ S K+G E
Sbjct: 281 DRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSRE 321
Score = 93 (37.8 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 120 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 176
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 177 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 217
Score = 85 (35.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLASTPESENE 963
E K +D +++ R R +S H S + + RS++ H R + RR + + +
Sbjct: 201 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRD---HKRSRSRERRRSRSRDRRRS 257
Query: 964 SRHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 258 RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 292
Score = 83 (34.3 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 27/91 (29%), Positives = 39/91 (42%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S + E+DR SK + SD KK + +
Sbjct: 260 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGS 319
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE 987
E ++E + + D +N NG ED++
Sbjct: 320 REKQSEDTNTESKESDTKN--EVNGTSEDIK 348
Score = 79 (32.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRKKPRRLASTPESE 961
S D +RS + +D+ RK + D +DR HR S DR++ R+ E
Sbjct: 249 SRSRDRRRS-RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRK-----SKE 302
Query: 962 NESRHKRHRRDN-RNGSR-KNGDHEDLEDGE 990
E R ++ + ++GSR K + + E E
Sbjct: 303 KEKRGSDDKKSSVKSGSREKQSEDTNTESKE 333
Score = 67 (28.6 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 24/100 (24%), Positives = 45/100 (45%)
Query: 519 YKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQE 578
Y K+ EL R K + DER K ++ER+ ++ + E ++++R + +E
Sbjct: 144 YAKIKATVEELKEKLR--KRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEE 201
Query: 579 ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSR 618
ER++ R+ + ++ R +D RCSR
Sbjct: 202 EREKERARDRER-------RKRSRSRSRHSSRTSDRRCSR 234
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 118 (46.6 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 22/97 (22%), Positives = 50/97 (51%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK+G ++ D+ SK+ GKD KK ++ S +E++K+ N + D KK
Sbjct: 921 KKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKE 980
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+ + + E++ + ++++ + + KN + ++ E+
Sbjct: 981 TTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEE 1017
Score = 93 (37.8 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 20/96 (20%), Positives = 41/96 (42%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPR 952
+D A + + + K K+ KK +K+ Q ++E+ +SK + D K +
Sbjct: 1003 EDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEKEESRDLKAKK 1062
Query: 953 RLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+ T E + HK +++++ N + ED
Sbjct: 1063 KEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEED 1098
Score = 88 (36.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 77/393 (19%), Positives = 148/393 (37%)
Query: 367 IAPMIDVSSSIGEAVTD-NTVAEAKNNLSNMSAS-DLVGASD-KVPPPVTEETRKDAVRG 423
+ P +D + S G + + + A+ N +S + D +GA + K E T D G
Sbjct: 523 VKPKVDANESDGNSTKERHQEAQVNNGVSTEDKNLDNIGADEQKKNDKSVEVTTND---G 579
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGAL 483
+ + EE LE K K L + +VG+ + +L + G
Sbjct: 580 DHTKEKREETQGNNGESVKNENLENKEDKKELKDDESVGAKTNNETSLEEKREQTQKGHD 639
Query: 484 RTLGER----KTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAV 539
++ + K + +K+ + ++++D K +E SS + +
Sbjct: 640 NSINSKIVDNKGGNADSNKEKEVHVGDSTNDNNMESKEDTKSEVEVKKNDGSSEKGEEGK 699
Query: 540 TMFENDERFKALERERDRKDMFDDH-LDELKQKERAKAQEERKRNIIEYR-KFLESCDFI 597
++ K LE + + D DD +D+ +++ + E + +E + K ES +
Sbjct: 700 ENNKDSMEDKKLENKESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENK 759
Query: 598 KANTQWRKVQDRLE-ADERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERK 656
K T +V+++ E +K+++ E S TE
Sbjct: 760 KTKTNENRVRNKEENVQGNKKESEKVEKGE------KKESKDAKSVETKDNKKLSSTE-- 811
Query: 657 NRDEFRKLMEADVALGTLTAKTNWRDY-CIKVKDSPPYMAVASNTSGSTP-KDLFEDVVE 714
NRDE ++ D K +DY ++ K+ V +N KDL +D
Sbjct: 812 NRDEAKERSGED----NKEDKEESKDYQSVEAKEKNENGGVDTNVGNKEDSKDLKDDRSV 867
Query: 715 ELQKQFQEDKTRIKDAVKLRKITLSSTWTFEDF 747
E++ +E + ++ V+ + SST DF
Sbjct: 868 EVKANKEESMKKKREEVQ--RNDKSSTKEVRDF 898
Score = 78 (32.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 51/216 (23%), Positives = 91/216 (42%)
Query: 378 GEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSD--ALEEKTV 435
GE+V + N +M +L +KV EE + +A K ++ + EEK
Sbjct: 428 GESVKGENLENKAGNEESMKGENL---ENKVG---NEELKGNASVEAKTNNESSKEEKRE 481
Query: 436 EQEHF--AYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDR-RYGALRTLGERKTA 492
E + Y NK E ++ ++G D T D +L + + + A + G
Sbjct: 482 ESQRSNEVYMNK-ETTKGENVNIQGESIG-DSTKDNSLENKEDVKPKVDANESDGNSTKE 539
Query: 493 FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSS----TRWSKAVTMFENDERF 548
++ E++ L A D+ KK ++SVE+T++ T+ + T N E
Sbjct: 540 RHQEAQVNNGVSTEDKNLDNIGA-DEQKKN-DKSVEVTTNDGDHTKEKREETQGNNGESV 597
Query: 549 KA--LERERDRKDMFDDHLDELKQKERAKAQEERKR 582
K LE + D+K++ DD K +E+R++
Sbjct: 598 KNENLENKEDKKELKDDESVGAKTNNETSLEEKREQ 633
Score = 67 (28.6 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 46/194 (23%), Positives = 78/194 (40%)
Query: 414 EETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRA 473
+E++ D+ + V D EE + +EAK K E+ ++ +
Sbjct: 714 KESQTDSKDDKSVDDKQEEAQIYGGESKDDKSVEAKGKKKESKENKKTKTNENRVRNKEE 773
Query: 474 IINDRRYGALRT-LGERKTAFN----EYLGQKKKQDAEERRLKLKKARDDYKKMLEESVE 528
+ + + + GE+K + + E KK E R +++ +D K+ EES +
Sbjct: 774 NVQGNKKESEKVEKGEKKESKDAKSVETKDNKKLSSTENRDEAKERSGEDNKEDKEESKD 833
Query: 529 LTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELK-QKERA--KAQEERKRN-- 583
S K EN + + D KD+ DD E+K KE + K +EE +RN
Sbjct: 834 YQSVEAKEKN----ENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDK 889
Query: 584 --IIEYRKFLESCD 595
E R F + D
Sbjct: 890 SSTKEVRDFANNMD 903
>UNIPROTKB|O95232 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0006950 "response to stress" evidence=IMP] [GO:0008380 "RNA
splicing" evidence=IMP] [GO:0003729 "mRNA binding" evidence=IMP]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 EMBL:CH471109 eggNOG:COG5200
HOVERGEN:HBG062167 InterPro:IPR004882 PANTHER:PTHR12375
Pfam:PF03194 HOGENOM:HOG000215956 CTD:51747 OrthoDB:EOG4QJRNZ
EMBL:AB034205 EMBL:DQ013876 EMBL:AK001925 EMBL:AK023672
EMBL:BC056409 EMBL:AF069250 IPI:IPI00107745 IPI:IPI00448519
RefSeq:NP_006098.2 RefSeq:NP_057508.2 UniGene:Hs.130293
ProteinModelPortal:O95232 IntAct:O95232 MINT:MINT-1683180
STRING:O95232 PhosphoSite:O95232 PaxDb:O95232 PeptideAtlas:O95232
PRIDE:O95232 DNASU:51747 Ensembl:ENST00000240304
Ensembl:ENST00000505658 GeneID:51747 KEGG:hsa:51747 UCSC:uc002isq.3
GeneCards:GC17P048796 HGNC:HGNC:24309 HPA:HPA018475 HPA:HPA018484
HPA:HPA020017 MIM:609434 neXtProt:NX_O95232 PharmGKB:PA165432062
InParanoid:O95232 ChiTaRS:LUC7L3 GenomeRNAi:51747 NextBio:55830
ArrayExpress:O95232 Bgee:O95232 Genevestigator:O95232
GermOnline:ENSG00000108848 Uniprot:O95232
Length = 432
Score = 97 (39.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS ++ R +R +HD + + RS++ R S
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE 984
DRK K R + E + +S+ K R D++ S K+G E
Sbjct: 357 DRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSRE 397
Score = 93 (37.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 252
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 253 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Score = 85 (35.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLASTPESENE 963
E K +D +++ R R +S H S + + RS++ H R + RR + + +
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRD---HKRSRSRERRRSRSRDRRRS 333
Query: 964 SRHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 334 RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 368
Score = 84 (34.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S + E+DR SK + SD KK + +
Sbjct: 336 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGS 395
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
E ++E + + D +N NG ED++ +G+
Sbjct: 396 REKQSEDTNTESKESDTKN--EVNGTSEDIKSEGD 428
Score = 79 (32.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRKKPRRLASTPESE 961
S D +RS + +D+ RK + D +DR HR S DR++ R+ E
Sbjct: 325 SRSRDRRRS-RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRK-----SKE 378
Query: 962 NESRHKRHRRDN-RNGSR-KNGDHEDLEDGE 990
E R ++ + ++GSR K + + E E
Sbjct: 379 KEKRGSDDKKSSVKSGSREKQSEDTNTESKE 409
>UNIPROTKB|Q5R8W6 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9601 "Pongo
abelii" [GO:0003729 "mRNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0006915 "apoptotic process"
evidence=ISS] [GO:0006950 "response to stress" evidence=ISS]
[GO:0008380 "RNA splicing" evidence=ISS] GO:GO:0005634
GO:GO:0006915 GO:GO:0006950 GO:GO:0008380 GO:GO:0003677
GO:GO:0016607 GO:GO:0003729 GO:GO:0006397 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194 CTD:51747
EMBL:CR859632 RefSeq:NP_001126042.1 UniGene:Pab.18951
ProteinModelPortal:Q5R8W6 PRIDE:Q5R8W6 GeneID:100172991
KEGG:pon:100172991 InParanoid:Q5R8W6 Uniprot:Q5R8W6
Length = 432
Score = 97 (39.2 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/101 (29%), Positives = 46/101 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS ++ R +R +HD + + RS++ R S
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE 984
DRK K R + E + +S+ K R D++ S K+G E
Sbjct: 357 DRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSRE 397
Score = 93 (37.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 252
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 253 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Score = 85 (35.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLASTPESENE 963
E K +D +++ R R +S H S + + RS++ H R + RR + + +
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRD---HKRSRSRERRRSRSRDRRRS 333
Query: 964 SRHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 334 RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 368
Score = 84 (34.6 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 28/95 (29%), Positives = 42/95 (44%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S + E+DR SK + SD KK + +
Sbjct: 336 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSGS 395
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
E ++E + + D +N NG ED++ +G+
Sbjct: 396 REKQSEDTNTESKESDTKN--EVNGTSEDIKSEGD 428
Score = 79 (32.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 25/91 (27%), Positives = 41/91 (45%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRKKPRRLASTPESE 961
S D +RS + +D+ RK + D +DR HR S DR++ R+ E
Sbjct: 325 SRSRDRRRS-RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRK-----SKE 378
Query: 962 NESRHKRHRRDN-RNGSR-KNGDHEDLEDGE 990
E R ++ + ++GSR K + + E E
Sbjct: 379 KEKRGSDDKKSSVKSGSREKQSEDTNTESKE 409
>UNIPROTKB|E1C6U8 [details] [associations]
symbol:LUC7L3 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0006950 "response
to stress" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003729 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
OMA:ISVPLWK EMBL:AADN02053609 IPI:IPI00820098
Ensembl:ENSGALT00000011942 ArrayExpress:E1C6U8 Uniprot:E1C6U8
Length = 434
Score = 96 (38.9 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 30/103 (29%), Positives = 51/103 (49%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ K+K +D K+ L + E K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYA----KIKATVEDLKEKLRKRTEEPDRDDRLKKEK 251
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E K+KERA+ +E RKR+
Sbjct: 252 Q-EREEREKEREREREERERKRRREEEEKEKERARDRERRKRS 293
Score = 94 (38.1 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 20/94 (21%), Positives = 43/94 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
E K +D +++ R R +S H S + + H+ + R++ R+++ + +
Sbjct: 277 EEKEKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRKMSRSRDRRRSR 336
Query: 965 RHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 337 SHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 370
Score = 89 (36.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 30/95 (31%), Positives = 43/95 (45%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S E E+DR SK + SD KK +S+
Sbjct: 338 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSREREQDRKSKEKEKRGSDDKKSSVKSSS 397
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
E ++E + + D +N NG ED++ +G+
Sbjct: 398 REKQSEDTNTDSKESDTKN--EVNGTSEDIKSEGD 430
Score = 87 (35.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 31/103 (30%), Positives = 48/103 (46%)
Query: 891 SKKDGADSDHDDSAENDSKRS-GKDNDKK---HRKRHQS-AHDSLDENEKDRSKNPHRHN 945
S+ SD S D KRS ++ +K R R +S +HD + + RS++ R
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRKMSRSRDRRRSRSHDRSERKHRSRSRDRRRSK 356
Query: 946 S-DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE 984
S DRK K R + E + +S+ K R D++ S K+ E
Sbjct: 357 SRDRKSYKHRSKSREREQDRKSKEKEKRGSDDKKSSVKSSSRE 399
Score = 76 (31.8 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 25/108 (23%), Positives = 44/108 (40%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS--- 946
H + + S D +RS + +D+ RK + D +DR HR S
Sbjct: 314 HKRSRSRERRRKMSRSRDRRRS-RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRER 372
Query: 947 --DRK---KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
DRK K +R + +S +S + + ++ N K D ++ +G
Sbjct: 373 EQDRKSKEKEKRGSDDKKSSVKSSSREKQSEDTNTDSKESDTKNEVNG 420
>UNIPROTKB|H0YA81 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9606 "Homo
sapiens" [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 HGNC:HGNC:24309 ChiTaRS:LUC7L3
EMBL:AC005921 Ensembl:ENST00000504065 Bgee:H0YA81 Uniprot:H0YA81
Length = 207
Score = 93 (37.8 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 16 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 72
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 73 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 113
Score = 85 (35.0 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLASTPESENE 963
E K +D +++ R R +S H S + + RS++ H R + RR + + +
Sbjct: 97 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRD---HKRSRSRERRRSRSRDRRRS 153
Query: 964 SRHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 154 RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 188
Score = 72 (30.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/99 (30%), Positives = 39/99 (39%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRK 949
S+ SD S D KRS + R+R +S D DRS+ HR S DR
Sbjct: 117 SRHSSRTSDRRCSRSRDHKRSRS----RERRRSRS-RDRRRSRSHDRSERKHRSRSRDR- 170
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
RR S + R K R+ S++ G L D
Sbjct: 171 --RRSKSRDRKSYKHRSKSRDREQDRKSKEKGQKIRLLD 207
Score = 72 (30.4 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 20/105 (19%), Positives = 43/105 (40%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
K+ D + + + S+ S + +D++ + E + RS++ R S +
Sbjct: 101 KERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSE 160
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
R+ S S+ R R+ ++ S+ +D + E G + R
Sbjct: 161 RKHRSRSRDRRRSK-SRDRKSYKHRSKSRDREQDRKSKEKGQKIR 204
>UNIPROTKB|Q5F457 [details] [associations]
symbol:WBP4 "WW domain-binding protein 4" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000690 InterPro:IPR001202
InterPro:IPR003604 InterPro:IPR013085 Pfam:PF00397 Pfam:PF06220
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS50171 SMART:SM00451
SMART:SM00456 GO:GO:0008380 GO:GO:0046872 GO:GO:0016607
GO:GO:0008270 GO:GO:0006397 GO:GO:0005681 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AJ851443 IPI:IPI00584023
RefSeq:NP_001025995.1 UniGene:Gga.7915 ProteinModelPortal:Q5F457
STRING:Q5F457 GeneID:418829 KEGG:gga:418829 CTD:11193
eggNOG:NOG125287 HOGENOM:HOG000067962 HOVERGEN:HBG053152
InParanoid:Q5F457 KO:K13220 OrthoDB:EOG4R7VBT NextBio:20821967
Uniprot:Q5F457
Length = 398
Score = 135 (52.6 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 25/69 (36%), Positives = 34/69 (49%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVT 258
+W + S +G YY+N +T S W+KP + + + W E S DG YYYN T
Sbjct: 139 EWVQGLSPEGYTYYYNTKTGESQWEKPKGFQGNSKTSHTGSVWVEGVSEDGHTYYYNTQT 198
Query: 259 KQSKWSLPD 267
S W PD
Sbjct: 199 GVSTWEKPD 207
Score = 50 (22.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN 962
S+ ND+ + GK +++ + +S DS E+ + ++P N RK + ESE
Sbjct: 211 SSSNDNSQRGKHSEEADSRASES--DSEQEDSESEGQSPGT-NLKRKGE----NDEESEK 263
Query: 963 ESRHK 967
E K
Sbjct: 264 EKSPK 268
Score = 49 (22.3 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRS 938
HS++ + + DS + DS+ G+ +++ ++ D +E+EK++S
Sbjct: 222 HSEEADSRASESDSEQEDSESEGQSPGTNLKRKGEN--D--EESEKEKS 266
Score = 41 (19.5 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 928 DSLDENEKDRS-KNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDL 986
D + D S + H +D + AS +SE E + N RK + E+
Sbjct: 207 DGFVSSSNDNSQRGKHSEEADSR-----ASESDSEQEDSESEGQSPGTNLKRKGENDEES 261
Query: 987 E 987
E
Sbjct: 262 E 262
Score = 38 (18.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+KP S+ ++N R K H + SR + + ED E G+S
Sbjct: 204 EKPDGFVSS-SNDNSQRGK-HSEEA--DSRASESDSEQEDSESEGQS 246
>UNIPROTKB|F1RTB6 [details] [associations]
symbol:LUC7L3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006950
"response to stress" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003729 GO:GO:0005925 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
OMA:ISVPLWK EMBL:CU655847 RefSeq:XP_003358147.1
Ensembl:ENSSSCT00000019110 GeneID:100625081 KEGG:ssc:100625081
Uniprot:F1RTB6
Length = 432
Score = 94 (38.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 30/101 (29%), Positives = 45/101 (44%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS ++ R +R +HD + + RS++ R S
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE 984
DRK K R + E E +S+ K R D++ S K+ E
Sbjct: 357 DRKSYKHRSKSRDREQERKSKEKEKRGSDDKKSSVKSSSRE 397
Score = 94 (38.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/115 (25%), Positives = 57/115 (49%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 252
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCD 595
E +ER K ERER+ ++ +E ++KERA+ +E RKR+ + R + D
Sbjct: 253 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRSRSQSRHSSRTSD 305
Score = 91 (37.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 30/99 (30%), Positives = 51/99 (51%)
Query: 894 DGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRR 953
D ++ H S D +RS K D+K K H+S S D ++ +SK + SD KK
Sbjct: 337 DRSERKHR-SRSRDRRRS-KSRDRKSYK-HRSK--SRDREQERKSKEKEKRGSDDKKSSV 391
Query: 954 LASTPESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
+S+ E ++E + + D++N NG ED++ +G+
Sbjct: 392 KSSSREKQSEDTNTESKESDSKN--EVNGTSEDIKSEGD 428
Score = 78 (32.5 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 30/95 (31%), Positives = 45/95 (47%)
Query: 899 DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS-DRK--KPRRLA 955
DH S + +RS + D R+R +S HD + + RS++ R S DRK K R +
Sbjct: 313 DHKRSRSRERRRS-RSRD---RRRSRS-HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKS 367
Query: 956 STPESENESRHKRHR-RDNRNGSRKNGDHE----D 985
E E +S+ K R D++ S K+ E D
Sbjct: 368 RDREQERKSKEKEKRGSDDKKSSVKSSSREKQSED 402
Score = 77 (32.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 24/97 (24%), Positives = 45/97 (46%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKH---RKRHQS-AHDSLDENEKDRSKNPHRHNS- 946
K+ + S H S+ +R + D K R+R +S + D DRS+ HR S
Sbjct: 291 KRSRSQSRH--SSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSR 348
Query: 947 DRKKPR-RLASTPESENESRHKRHRRDNRNGSRKNGD 982
DR++ + R + + ++SR + R ++ ++ D
Sbjct: 349 DRRRSKSRDRKSYKHRSKSRDREQERKSKEKEKRGSD 385
>UNIPROTKB|F1NXG2 [details] [associations]
symbol:WBP4 "WW domain-binding protein 4" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0045292
"mRNA cis splicing, via spliceosome" evidence=IEA] [GO:0070064
"proline-rich region binding" evidence=IEA] InterPro:IPR000690
InterPro:IPR001202 InterPro:IPR003604 InterPro:IPR013085
Pfam:PF00397 Pfam:PF06220 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS50171 SMART:SM00451 SMART:SM00456 GO:GO:0005886
GO:GO:0046872 GO:GO:0016607 GO:GO:0008270 GO:GO:0005681
GO:GO:0003676 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0045292
IPI:IPI00584023 OMA:HEEVDLE GeneTree:ENSGT00390000013956
EMBL:AADN02005497 Ensembl:ENSGALT00000027397 Uniprot:F1NXG2
Length = 398
Score = 134 (52.2 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 25/69 (36%), Positives = 33/69 (47%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVT 258
+W + S +G YY+N +T S W+KP + + W E S DG YYYN T
Sbjct: 139 EWVQGLSPEGYTYYYNTKTGESQWEKPKGFQGNSKTSHTGAVWVEGVSEDGHTYYYNTQT 198
Query: 259 KQSKWSLPD 267
S W PD
Sbjct: 199 GVSTWEKPD 207
Score = 50 (22.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 18/65 (27%), Positives = 31/65 (47%)
Query: 903 SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN 962
S+ ND+ + GK +++ + +S DS E+ + ++P N RK + ESE
Sbjct: 211 SSSNDNSQRGKHSEEADSRASES--DSEQEDSESEGQSPGT-NLKRKGE----NDEESEK 263
Query: 963 ESRHK 967
E K
Sbjct: 264 EKSPK 268
Score = 49 (22.3 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 12/49 (24%), Positives = 28/49 (57%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRS 938
HS++ + + DS + DS+ G+ +++ ++ D +E+EK++S
Sbjct: 222 HSEEADSRASESDSEQEDSESEGQSPGTNLKRKGEN--D--EESEKEKS 266
Score = 41 (19.5 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 15/61 (24%), Positives = 23/61 (37%)
Query: 928 DSLDENEKDRS-KNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDL 986
D + D S + H +D + AS +SE E + N RK + E+
Sbjct: 207 DGFVSSSNDNSQRGKHSEEADSR-----ASESDSEQEDSESEGQSPGTNLKRKGENDEES 261
Query: 987 E 987
E
Sbjct: 262 E 262
Score = 38 (18.4 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+KP S+ ++N R K H + SR + + ED E G+S
Sbjct: 204 EKPDGFVSS-SNDNSQRGK-HSEEA--DSRASESDSEQEDSESEGQS 246
>WB|WBGene00016360 [details] [associations]
symbol:C33G8.2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007067 "mitosis" evidence=IMP] GO:GO:0009792
GO:GO:0007067 GeneTree:ENSGT00690000102070 EMBL:FO080765 PIR:T34137
RefSeq:NP_504775.1 UniGene:Cel.30633 ProteinModelPortal:Q18401
EnsemblMetazoa:C33G8.2 GeneID:183174 KEGG:cel:CELE_C33G8.2
UCSC:C33G8.2 CTD:183174 WormBase:C33G8.2 eggNOG:NOG145231
InParanoid:Q18401 OMA:DDVDKDM NextBio:920178 Uniprot:Q18401
Length = 390
Score = 108 (43.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 28/110 (25%), Positives = 53/110 (48%)
Query: 892 KKDGADSDHDDSAENDSKRSGK---DND----KKHRKRHQSAHDSLDENEKDRSKNPHRH 944
KKD + D DD E D K+ K D+D KK +K+ + D DE+ K + K +
Sbjct: 244 KKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKD 303
Query: 945 NSD-----RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDH-EDLED 988
+ D ++K ++ + +++ ++ ++D + K+ D ED +D
Sbjct: 304 DKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDD 353
Score = 104 (41.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/115 (26%), Positives = 50/115 (43%)
Query: 892 KKDGADSDHDDSAENDSKRS------GKDNDK--------KHRKRHQSAHDSLDENEKDR 937
KKD D DD END K+ KD+D+ K +K+ D DE EKD+
Sbjct: 201 KKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDK 260
Query: 938 SKNPHRHNSD----RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
K + N D +KK ++ + + + +K+ + + + + D E +D
Sbjct: 261 KKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKD 315
Score = 102 (41.0 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 27/91 (29%), Positives = 43/91 (47%)
Query: 892 KKDGADSDHDDSAENDSKRSGK---DND------KKHRKRHQSAHDSLDENEKDRSKNPH 942
KKD D D D+ E D K+ K D+D KK +K+ D DE++ D+ K
Sbjct: 301 KKDDKD-DEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDKKKKKD 359
Query: 943 RHNSDRKKPRRLASTPESENESRHKRHRRDN 973
+ D KK ++ + E+E K+ ++ N
Sbjct: 360 DVDDDMKKDKKKKEDDDKEDEDDKKKDKKKN 390
Score = 101 (40.6 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 28/105 (26%), Positives = 45/105 (42%)
Query: 892 KKDGADSDHD--DSAENDSKRSGKD----NDKKHRKRHQSAHDSLDENEKDRSKNPHRHN 945
KKD D + D + D K+ D NDKK K+ + DENE D+ K+ +
Sbjct: 186 KKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKK 245
Query: 946 SDRKKPRRLASTPESENESRHKRH--RRDNRNGSRKNGDHEDLED 988
D++K + + + + K D + +K D +D ED
Sbjct: 246 DDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDED 290
Score = 96 (38.9 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 21/99 (21%), Positives = 43/99 (43%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK DD ++D KD KK +K++ + +++K + + + D KK
Sbjct: 237 KKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKK 296
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ + ++E K +D + +K D +D ++ E
Sbjct: 297 DKKKKKDDKDDEDEEKE--KDKKKKDKKKDDDDDDDEKE 333
Score = 80 (33.2 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 21/85 (24%), Positives = 43/85 (50%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRK 558
+K D EE + K KK + D EE E + K + DE K ++++ +
Sbjct: 169 EKNDDDDEEDKKKDKKKKKDDND--EEEKEKDKKKKDKKKDDDDDEDENDKKKDKKKKKD 226
Query: 559 DMFDDHLDELKQKERAKAQEERKRN 583
D DD ++ K+K++ K +++++++
Sbjct: 227 DKDDDENEDDKKKDKKKKKDDKEKD 251
Score = 79 (32.9 bits), Expect = 3.7e-05, Sum P(3) = 3.7e-05
Identities = 24/87 (27%), Positives = 47/87 (54%)
Query: 499 QKKKQDA-EERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR 557
+KKK D EE + K KK +D KK ++ E + + K + D+ ++++D+
Sbjct: 184 KKKKDDNDEEEKEKDKKKKD--KKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDK 241
Query: 558 KDMFDD-HLDELKQKERAKAQEERKRN 583
K DD D+ ++E+ K ++++K+N
Sbjct: 242 KKKKDDKEKDDDDEEEKDKKKKDKKKN 268
Score = 77 (32.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/84 (29%), Positives = 46/84 (54%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERER-DR 557
+KK++D EE K KK +D+ K ++ E + K +NDE K ++++ D+
Sbjct: 150 KKKEEDDEEEEQKDKKKKDE--KNDDDDEE---DKKKDKKKKKDDNDEEEKEKDKKKKDK 204
Query: 558 KDMFDDHLDEL-KQKERAKAQEER 580
K DD DE K+K++ K ++++
Sbjct: 205 KKDDDDDEDENDKKKDKKKKKDDK 228
Score = 69 (29.3 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 479 RYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESV-ELTSSTRWSK 537
R+G R G + N+ D+ E + K K+ RD K+ E+ E + K
Sbjct: 91 RHGMGRHGGHGRR--NKSGSDSDSSDSSEDKKKRKQMRDKKKQEEEDKKKEEEEKDKKKK 148
Query: 538 AVTMFENDERFKALERER-DRKDMFDDHLDELKQKERAKA---QEERKRN 583
E+DE + ++++ D K+ DD D+ K K++ K +EE++++
Sbjct: 149 DKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKD 198
Score = 68 (29.0 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 22/87 (25%), Positives = 46/87 (52%)
Query: 499 QKKKQDA-----EERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALER 553
+KKK D E+ + K KK + D K+ ++ E + K ++DE K ++
Sbjct: 222 KKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKN--DDDEEDKKKDK 279
Query: 554 ERDRKDMFDDHLDELKQKERAKAQEER 580
++ +KD DD ++ K+K++ K ++++
Sbjct: 280 KK-KKDDDDDEDEDNKKKDKKKKKDDK 305
Score = 37 (18.1 bits), Expect = 6.7e-06, Sum P(3) = 6.7e-06
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 406 DKVPPPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKN 450
DK ++ +++ + +K D +E+ E+E K + KN
Sbjct: 127 DKKKQEEEDKKKEEEEKDKKKKDKKKEEDDEEEEQKDKKKKDEKN 171
>ZFIN|ZDB-GENE-040426-2822 [details] [associations]
symbol:ppig "peptidyl-prolyl isomerase G
(cyclophilin G)" species:7955 "Danio rerio" [GO:0006457 "protein
folding" evidence=IEA] [GO:0003755 "peptidyl-prolyl cis-trans
isomerase activity" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] InterPro:IPR002130 InterPro:IPR020892 Pfam:PF00160
PRINTS:PR00153 PROSITE:PS00170 PROSITE:PS50072
ZFIN:ZDB-GENE-040426-2822 GO:GO:0006457 GO:GO:0003755
SUPFAM:SSF50891 GO:GO:0000413 KO:K09566 CTD:9360 HOVERGEN:HBG048162
HOGENOM:HOG000115659 HSSP:Q27450 EMBL:BC044189 IPI:IPI00493837
RefSeq:NP_998629.1 UniGene:Dr.18174 ProteinModelPortal:Q7ZYY1
SMR:Q7ZYY1 PRIDE:Q7ZYY1 GeneID:406773 KEGG:dre:406773
InParanoid:Q7ZYY1 NextBio:20818287 ArrayExpress:Q7ZYY1 Bgee:Q7ZYY1
Uniprot:Q7ZYY1
Length = 687
Score = 95 (38.5 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 33/126 (26%), Positives = 59/126 (46%)
Query: 500 KKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKD 559
K + + ER + KK D +K S + + K + +D+R ++ +E+DRK+
Sbjct: 441 KHRSKSRERDAR-KKPDADAEKKKSRSRSKSKDKKREKEKSKKPDDKRGRSASKEKDRKE 499
Query: 560 MFDDHLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSR 618
D +++ + KERAK E+ K +E +K E + ++ + R V R + R R
Sbjct: 500 KNDKEVEQKDRSKERAKDGEKEKSKEVEKKKNGER-ERSRSKEKGRDVSRRSRSRGRGQR 558
Query: 619 LDKMDR 624
DR
Sbjct: 559 GQSRDR 564
Score = 87 (35.7 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 23/97 (23%), Positives = 48/97 (49%)
Query: 895 GADS-DHDDSAENDSKRS-GKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHN-SDR 948
G D+ D SA+N S+ + G+D K R K+ + + KD+S + +D+
Sbjct: 590 GRDAEDRRKSADNKSRETRGRDRSSKERSSQKQRSREREDRQKRRKDKSDTGSSDSDNDK 649
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHED 985
+K R+ + +P+S+ ++ K + ++ +K+ D
Sbjct: 650 RKKRKTSDSPKSKERAKDKS-KSPRKDAKKKDSSSSD 685
Score = 77 (32.2 bits), Expect = 9.3e-05, Sum P(3) = 9.3e-05
Identities = 29/107 (27%), Positives = 47/107 (43%)
Query: 891 SKKDGADSDHDDSAEND-SKRS-------GKDNDKKHRKRHQSAHDSL--DENEKDRS-- 938
S+ G D H S E S RS G+D + + + + ++ D + K+RS
Sbjct: 561 SRDRGRDRRHSSSRERKTSHRSRSRERARGRDAEDRRKSADNKSRETRGRDRSSKERSSQ 620
Query: 939 KNPHRHNSDRKKPRRLAS---TPESENESRHKRHRRDNRNGSRKNGD 982
K R DR+K R+ S + +S+N+ R KR D+ + D
Sbjct: 621 KQRSREREDRQKRRKDKSDTGSSDSDNDKRKKRKTSDSPKSKERAKD 667
Score = 52 (23.4 bits), Expect = 9.5e-06, Sum P(3) = 9.5e-06
Identities = 16/87 (18%), Positives = 31/87 (35%)
Query: 209 RRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDE 268
RRY R+R +WD+ R++ W+ +K N Q +W D+
Sbjct: 334 RRYRTPSRSRSRSWDR-------FRRSETPPHWRHEMQRT-QKAKANLAASQERWIKGDK 385
Query: 269 LKLAREQAEKASIKGTQSETSPNSQTS 295
++ E+ + + T+
Sbjct: 386 GDMSEEKTKTTELSSVNKARGDKQDTA 412
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(3) = 0.00018
Identities = 19/77 (24%), Positives = 33/77 (42%)
Query: 233 ERADASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGT-QSETSPN 291
E D+S+D +S D + K K+ K + K + +K KG+ + E P
Sbjct: 195 ESEDSSSD----SSSDSEES--EKEKKRRKKHKKEHKKKKESKHKKKEKKGSDEEEAEPQ 248
Query: 292 SQTSISFPSSVVKAPSS 308
+ ++I P V P +
Sbjct: 249 AVSTIR-PEEVPPIPEN 264
>FB|FBgn0031273 [details] [associations]
symbol:CG2839 species:7227 "Drosophila melanogaster"
[GO:0030246 "carbohydrate binding" evidence=IEA] InterPro:IPR001304
Pfam:PF00059 PROSITE:PS50041 SMART:SM00034 EMBL:AE014134
GO:GO:0030246 Gene3D:3.10.100.10 InterPro:IPR016186
InterPro:IPR016187 SUPFAM:SSF56436 HSSP:P22897
GeneTree:ENSGT00700000104356 RefSeq:NP_608540.1
ProteinModelPortal:Q9VPS3 SMR:Q9VPS3 EnsemblMetazoa:FBtr0077999
GeneID:33244 KEGG:dme:Dmel_CG2839 UCSC:CG2839-RA
FlyBase:FBgn0031273 eggNOG:NOG243297 OMA:RIMEKER OrthoDB:EOG4DBRWH
PhylomeDB:Q9VPS3 GenomeRNAi:33244 NextBio:782628
ArrayExpress:Q9VPS3 Uniprot:Q9VPS3
Length = 826
Score = 107 (42.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 41/145 (28%), Positives = 71/145 (48%)
Query: 487 GERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEN-- 544
G+ + E +++K+ EERR + ++ R++ +K EE R + E
Sbjct: 279 GKPRIMEKERSKEEEKRKEEERRREEERKREEERKREEERKREEERKREEERKREEERRK 338
Query: 545 -DERFKALERERD--RKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
+ER K ERER+ RK + +E +++E + +EE KR E RK E + +
Sbjct: 339 EEERKKEEEREREEERKREHNRKKEEERKREEKRRKEEEKRKEEERRKEEERKEEERRKE 398
Query: 602 QWRKVQDRLEADERCSRLDKMDRLE 626
+ RK ++R + +ER R +K R E
Sbjct: 399 EERKEEERRKEEER--RKEKRRRDE 421
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 20/105 (19%), Positives = 37/105 (35%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
K+ + + + KR ++ +K R+R + + EK+R R +R++
Sbjct: 511 KRKEEERREKERRREEGKRKEEERREKERRREEEKRKEEERREKERRDEERRREEERRRE 570
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
E E +R R RK + E+ E R
Sbjct: 571 EERRREEERRREEERRREEERRREEERKREEERRREEERRREEER 615
Score = 82 (33.9 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 25/101 (24%), Positives = 43/101 (42%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNSDR 948
+++ + + AE K+ + ++K R KR + + E E+ R + R +R
Sbjct: 441 REEAERKEEERKAEERRKKEERRREEKRRREEKRRREEEERRKEEER-REEEEKRKEEER 499
Query: 949 KKP--RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE 987
+K RR E E R K RR+ G RK + + E
Sbjct: 500 RKDEERRREEEKRKEEERREKERRREE--GKRKEEERREKE 538
Score = 80 (33.2 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 20/88 (22%), Positives = 37/88 (42%)
Query: 901 DDSAENDSKRSGKDNDK-KHRKRHQSAHDSLDENEKDRSKNPHRHNSD--RKKPRRLAST 957
++ E + KR ++ K + R+R + + EK+R + + + R+K RR
Sbjct: 485 EERREEEEKRKEEERRKDEERRREEEKRKEEERREKERRREEGKRKEEERREKERRREEE 544
Query: 958 PESENESRHKRHRRDNRNGSRKNGDHED 985
E E R K R + R + E+
Sbjct: 545 KRKEEERREKERRDEERRREEERRREEE 572
Score = 78 (32.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 22/103 (21%), Positives = 38/103 (36%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKD----RSKNPHRHNSD 947
KK+ + E +R ++ K+ +R + +E KD R + +
Sbjct: 458 KKEERRREEKRRREEKRRREEEERRKEEERREEEEKRKEEERRKDEERRREEEKRKEEER 517
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
R+K RR E E R K RR+ + ++ D E
Sbjct: 518 REKERRREEGKRKEEERREKERRREEEKRKEEERREKERRDEE 560
Score = 78 (32.5 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 24/106 (22%), Positives = 43/106 (40%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH-RHNSDRKK 950
K++ D + E + KR ++ +K R+R + + EK+R + R +R++
Sbjct: 495 KEEERRKDEERRREEE-KRKEEERREKERRREEGKRKEEERREKERRREEEKRKEEERRE 553
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
R E E R + RR R R+ + E+ E R
Sbjct: 554 KERRDEERRREEERRREEERR--REEERRREEERRREEERRREEER 597
Score = 77 (32.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 16/90 (17%), Positives = 35/90 (38%)
Query: 902 DSAENDSKRSGKDNDKKHRKR-HQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPES 960
+ D KR ++ +K +R + + + E++R R +R++ + +
Sbjct: 415 EKRRRDEKRRREEEKRKEEERKEEERREEAERKEEERKAEERRKKEERRREEKRRREEKR 474
Query: 961 ENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
E +R + R K + E +D E
Sbjct: 475 RREEEERRKEEERREEEEKRKEEERRKDEE 504
Score = 75 (31.5 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 20/105 (19%), Positives = 43/105 (40%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
+K+ ++ + KR K+ ++K + + + E E+ + + R RK+
Sbjct: 628 RKEEERRKEEERKREEEKR--KEEERKREEERRREEEKRKEEERRKEEERKREEEKRKEE 685
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
+R + + E R KR + RK + + E+ + E R
Sbjct: 686 KRKREEEKRKKEER-KREEEKRKEDERKREEEKRKEEEKRKEEER 729
Score = 72 (30.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/88 (18%), Positives = 34/88 (38%)
Query: 901 DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPES 960
++ + KR K+ +++ + + + E E+ R + R RK+ R
Sbjct: 619 EERRREEEKR--KEEERRKEEERKREEEKRKEEERKREEERRREEEKRKEEERRKEEERK 676
Query: 961 ENESRHKRHRRDNRNGSRKNGDHEDLED 988
E + K +R RK + + E+
Sbjct: 677 REEEKRKEEKRKREEEKRKKEERKREEE 704
Score = 72 (30.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/91 (18%), Positives = 33/91 (36%)
Query: 902 DSAENDSKRSGKDNDKKHRKRHQSAHDSLDEN--EKDRSKNPHRHNSDRKKPRRLASTPE 959
D + K+ ++K +R + A +E E+ R K R R++ + E
Sbjct: 420 DEKRRREEEKRKEEERKEEERREEAERKEEERKAEERRKKEERRREEKRRREEKRRREEE 479
Query: 960 SENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ +R + R + D E + E
Sbjct: 480 ERRKEEERREEEEKRKEEERRKDEERRREEE 510
Score = 71 (30.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 16/97 (16%), Positives = 40/97 (41%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAH-DSLDENEKDRSKNPHRHNSDRKK 950
K++ + + E + ++ + ++ RKR + + + E+++ K R + K+
Sbjct: 647 KEEERKREEERRREEEKRKEEERRKEEERKREEEKRKEEKRKREEEKRKKEERKREEEKR 706
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE 987
E + + KR + + RK + E+ E
Sbjct: 707 KEDERKREEEKRKEEEKRKEEERKEEERKKKETEEKE 743
Score = 68 (29.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 17/99 (17%), Positives = 39/99 (39%)
Query: 892 KKDGADSDHDDSAENDSKRSG---KDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR 948
K++ + + E + KR ++ +K+ + + + E EK + + R R
Sbjct: 635 KEEERKREEEKRKEEERKREEERRREEEKRKEEERRKEEERKREEEKRKEEKRKREEEKR 694
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE 987
KK R + + + R + + RK + ++ E
Sbjct: 695 KKEERKREEEKRKEDERKREEEKRKEEEKRKEEERKEEE 733
Score = 67 (28.6 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 19/96 (19%), Positives = 41/96 (42%)
Query: 901 DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPES 960
++ + + +R + D++ R+ + + E++R + R R++ RR +
Sbjct: 543 EEKRKEEERREKERRDEERRREEERRREEERRREEERRREEERR---REEERRREEERKR 599
Query: 961 ENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
E E R + RR R R+ + E+ + E R
Sbjct: 600 EEERRREEERR--REEERRREEERRREEEKRKEEER 633
Score = 65 (27.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 19/92 (20%), Positives = 36/92 (39%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
E + +R + ++ R+R + + E E+ R + R R++ R + + E
Sbjct: 576 EEERRREEERRREEERRREE---ERKREEERRREEERRREEERRREEERRREEEKRKEEE 632
Query: 965 RHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
R K R RK + + E+ E R
Sbjct: 633 RRKEEERKREEEKRKEEERKREEERRREEEKR 664
Score = 65 (27.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 17/94 (18%), Positives = 35/94 (37%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAH--DSLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN 962
E + KR + ++ R+R + + E+ R + R +RK+ E +
Sbjct: 594 EEERKREEERRREEERRREEERRREEERRREEEKRKEEERRKEEERKREEEKRKEEERKR 653
Query: 963 ESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
E +R + R+ + E+ + E R
Sbjct: 654 EEERRREEEKRKEEERRKEEERKREEEKRKEEKR 687
Score = 65 (27.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 15/105 (14%), Positives = 37/105 (35%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
+K+ + + E + K + +++ +K + + EK R + R + ++
Sbjct: 430 RKEEERKEEERREEAERKEEERKAEERRKKEERRREEKRRREEKRRREEEERRKEEERRE 489
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
E + +R + R + E+G+ E R
Sbjct: 490 EEEKRKEEERRKDEERRREEEKRKEEERREKERRREEGKRKEEER 534
>UNIPROTKB|J9NVS6 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] InterPro:IPR026189 GO:GO:0005200
PANTHER:PTHR16742 GeneTree:ENSGT00690000102102 EMBL:AAEX03008007
Ensembl:ENSCAFT00000043219 Uniprot:J9NVS6
Length = 444
Score = 106 (42.4 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 26/102 (25%), Positives = 51/102 (50%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDND-KKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
+K + + + E++ ++ G D KK +K + + +S E+E D K+ + KK
Sbjct: 276 EKKASKKGKESATESEDEKKGTKKDAKKEKKGSKKSKESATESE-DEKKDAKKEKKGSKK 334
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYG 992
+ ST ESE+E + + +D + S+K G+ +D + G
Sbjct: 335 SK--GSTIESEDEKKDAKMDKDGKKDSKKLGEKDDQSKDKKG 374
Score = 77 (32.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/186 (21%), Positives = 73/186 (39%)
Query: 399 SDLVGASDKVPPPVTEETRKDAVRG--EKVSDALEEKTVEQEHFAYANKLEAKNAFKALL 456
SD + A + PP + + +KDA EK + + K +++ A+ +KLE++ L
Sbjct: 89 SDYLAARSQ-PPYKSYKWKKDAKVADVEKPTSPIAGKKDKEDKQAHKDKLESETESTVLK 147
Query: 457 ESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKAR 516
E + D+ + + A + K + G++ ++E+ + KK R
Sbjct: 148 EPKITKTKPMKDRDIERGTKGEKDVAKTDAKKEKKDLKK--GKESATESEDEKKGPKKER 205
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKA 576
KK E E + K + A E E ++K + K KE A
Sbjct: 206 KASKKGKESGTESEDEKKGPKKEKKAPKKGKESATESEDEKKGPKKERKASKKGKESATE 265
Query: 577 QEERKR 582
E+ K+
Sbjct: 266 SEDEKK 271
>SGD|S000006356 [details] [associations]
symbol:URN1 "Putative protein of unknown function containing
WW and FF domains" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 SGD:S000006356
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:BK006949 EMBL:U40829 Gene3D:2.20.70.10 SUPFAM:SSF51045
OrthoDB:EOG4XH37P Gene3D:1.10.10.440 InterPro:IPR002713
Pfam:PF01846 SMART:SM00441 SUPFAM:SSF81698 EMBL:AY692740 PIR:S69038
RefSeq:NP_015478.1 PDB:2JUC PDBsum:2JUC ProteinModelPortal:Q06525
SMR:Q06525 DIP:DIP-2017N IntAct:Q06525 MINT:MINT-401712
STRING:Q06525 PaxDb:Q06525 EnsemblFungi:YPR152C GeneID:856275
KEGG:sce:YPR152C CYGD:YPR152c eggNOG:NOG305481 HOGENOM:HOG000141866
OMA:EPTKYHY EvolutionaryTrace:Q06525 NextBio:981586
Genevestigator:Q06525 GermOnline:YPR152C Uniprot:Q06525
Length = 465
Score = 118 (46.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 240 DWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSP 290
+W+EF +P G+KYYYNK TKQS+W P+ LK A K +Q+E P
Sbjct: 4 EWQEFKTPAGKKYYYNKNTKQSRWEKPN-LKKGSNLESNA--KESQTERKP 51
Score = 64 (27.6 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 30/166 (18%), Positives = 66/166 (39%)
Query: 360 FPKTVDAIAPMIDVSSSIGEAVTDNTVAEAKNNL-SNMSASDLVGASDKVPPPVTEETRK 418
F + D + ++S G+ + + E+ L S +S G D+ +E +
Sbjct: 136 FKRNQDEVERKDEISEEAGDV--KSPLQESHTGLVSGYGSSS--GEEDEEEDEEEDEENE 191
Query: 419 DAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDR 478
+ + + +S + ++ + ++ +N F L + + TW + I ND
Sbjct: 192 EQIVNQDISIIDDLNRIDTDD------IDERNIFFELFDRYKLDKFSTWSLQSKKIENDP 245
Query: 479 RYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLE 524
+ +R R++ F E+ G++ E + DD ++LE
Sbjct: 246 DFYKIRDDTVRESLFEEWCGERSGNATAEESDSEDNSEDD-SEVLE 290
Score = 62 (26.9 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 29/117 (24%), Positives = 47/117 (40%)
Query: 500 KKKQDAEERRLKLKKARDDYKKMLEES-VELTSSTRWSKAVTMFENDERFKALERERDRK 558
K+ QD ER+ ++ + D K L+ES L S S E DE E E + +
Sbjct: 137 KRNQDEVERKDEISEEAGDVKSPLQESHTGLVSGYGSSSG----EEDEEEDEEEDEENEE 192
Query: 559 DMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKAN--TQWRKVQDRLEAD 613
+ + + + R + +RNI F E D K + + W ++E D
Sbjct: 193 QIVNQDISIIDDLNRIDTDDIDERNI-----FFELFDRYKLDKFSTWSLQSKKIEND 244
Score = 58 (25.5 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 13/46 (28%), Positives = 24/46 (52%)
Query: 794 FFDLLCSVKEISATSTWENCRQLLEGSQEFSSIGDESICRGVFDEF 839
FF+L K + STW + +E +F I D+++ +F+E+
Sbjct: 219 FFELFDRYK-LDKFSTWSLQSKKIENDPDFYKIRDDTVRESLFEEW 263
Score = 38 (18.4 bits), Expect = 5.9e-05, Sum P(3) = 5.9e-05
Identities = 6/13 (46%), Positives = 12/13 (92%)
Query: 897 DSDHDDSAENDSK 909
+SD +D++E+DS+
Sbjct: 275 ESDSEDNSEDDSE 287
>DICTYBASE|DDB_G0289719 [details] [associations]
symbol:DDB_G0289719 "SFRS2-interacting protein"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0289719 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 EMBL:AAFI02000148 Gene3D:3.30.40.10
InterPro:IPR013083 InterPro:IPR017907 RefSeq:XP_636078.1
ProteinModelPortal:Q54H40 EnsemblProtists:DDB0188541 GeneID:8627288
KEGG:ddi:DDB_G0289719 eggNOG:KOG4430 InParanoid:Q54H40 OMA:ERESEHA
Uniprot:Q54H40
Length = 1419
Score = 106 (42.4 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 59/253 (23%), Positives = 117/253 (46%)
Query: 379 EAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEEKTVEQE 438
+ VT +T K + S+ S++ EE K+ +K S +K V +
Sbjct: 534 KVVTKSTSKPLKQSKKKEIESESESKSEEEEEE--EEEEKEEESKKKSSSKQSKKKVTKS 591
Query: 439 HFA--YANKLEAKNAFKALLESANVGSD----WTWDQALRAIINDRRYGALRTLGERKTA 492
F + ++ E+K++ K + +SA+ S D+ L++ +D ++ +K
Sbjct: 592 KFESEHESEEESKDSKKNVKKSASKQSKKKVTQESDEELKSE-SDEEIKKEKSKKVKKEK 650
Query: 493 FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALE 552
N+ L +K+K++ EE+R + K+ + KK E+ E K E +++ K
Sbjct: 651 ENK-LKEKEKKE-EEKRKEEKEKLEREKKEKEKEKEKEKEKEKEKEKKRIEKEKK-KI-- 705
Query: 553 RERDRKDMFDDHLDELKQKERA-KAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLE 611
RE + K+ DE K+KE+ K ++E++ + RK E + + + RK ++R E
Sbjct: 706 RENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKE 765
Query: 612 ADERCSRLDKMDR 624
+E+ R +K ++
Sbjct: 766 KEEK-ERKEKEEK 777
Score = 99 (39.9 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 48/219 (21%), Positives = 98/219 (44%)
Query: 411 PVTEETRKDAVRGE--KVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWD 468
P++++++K AV E + S+ E+ E+E NK AK K + A +
Sbjct: 456 PISKQSKKKAVESESEEESEPGSEEESEEESKKAVNKASAKPISKQSKKKAVESEPESES 515
Query: 469 QALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAE-ERRLKLKKARDDYKKMLEESV 527
++ + T + ++ L Q KK++ E E K ++ ++ ++ EE
Sbjct: 516 ESDEESEEEEESEEEETNKVVTKSTSKPLKQSKKKEIESESESKSEEEEEEEEEEKEEES 575
Query: 528 ELTSSTRWSKA-VTMFENDERFKALERERD-RKDMFDDHLDELKQKERAKAQEERKRNII 585
+ SS++ SK VT + + ++ E +D +K++ + K+K ++ EE K
Sbjct: 576 KKKSSSKQSKKKVTKSKFESEHESEEESKDSKKNVKKSASKQSKKKVTQESDEELKSESD 635
Query: 586 EYRKFLESCDFIKANTQWRKVQDRLEADERCSRLDKMDR 624
E K +S K K +++ E ++R +K++R
Sbjct: 636 EEIKKEKSKKVKKEKENKLKEKEKKEEEKRKEEKEKLER 674
Score = 97 (39.2 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 28/118 (23%), Positives = 59/118 (50%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRK 558
++K+++ E+ + K KK + KK + E+ E + E +E+ + + E++ K
Sbjct: 681 KEKEKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEK 740
Query: 559 DMFDDHLDELKQKERAKAQE-ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADER 615
+ ++ +E K+KE K +E ERK + RK E + + + RK ++ + E+
Sbjct: 741 ERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEK 798
Score = 96 (38.9 bits), Expect = 0.00048, Sum P(3) = 0.00048
Identities = 52/236 (22%), Positives = 103/236 (43%)
Query: 388 EAKNNLSNMSASDLVGASDK-VPPPVTEETRKDAVRGEKVSDALEE-KTVEQEHFAYANK 445
++K ++ S +L SD+ + +++ +K+ K + EE K E++ K
Sbjct: 617 QSKKKVTQESDEELKSESDEEIKKEKSKKVKKEKENKLKEKEKKEEEKRKEEKEKLEREK 676
Query: 446 LEAKNAFKALLESANVGSDWTWDQALRAII-NDRRYGALRTLGERKTAFNEYLGQKKKQD 504
E + + E ++ + I N+ + + E+K E +K+K++
Sbjct: 677 KEKEKEKEKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEE 736
Query: 505 AEERRLKL-----KKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERE-RDRK 558
EE+ K +K +++ K+ +E E R K + E K E+E +DRK
Sbjct: 737 KEEKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRK 796
Query: 559 DMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE 614
+ +E K+KE K ++ERK E R+ E + + Q ++ ++R E +E
Sbjct: 797 EKERKENEEKKRKE--KEEKERKEK--EEREKQEK-EREEKEKQEKEERERKEKEE 847
Score = 94 (38.1 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 19/99 (19%), Positives = 43/99 (43%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK+ + + + E + ++ K +K+ +K ++ + EKD K + DRK+
Sbjct: 676 KKE-KEKEKEKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEK 734
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
ENE ++ + + + ++ + E+ E E
Sbjct: 735 EEKEEKERKENEENERKEKEEKKRKEKERKEKEEKERKE 773
Score = 91 (37.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 17/100 (17%), Positives = 51/100 (51%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRK-RHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
+K+ D + E ++ ++N++K ++ + + + ++ EK+R + + ++++
Sbjct: 725 EKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEE 784
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+R E E + R ++ R++N RK + ++ ++ E
Sbjct: 785 KKR----KEKEEKDRKEKERKENEEKKRKEKEEKERKEKE 820
Score = 91 (37.1 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 20/100 (20%), Positives = 46/100 (46%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENE-KDRSKNPHRHNSDRKK 950
K+ + + + K+ ++N++K RK+ + E E KDR + + +RK+
Sbjct: 685 KEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKE 744
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
E E + R ++ R++ RK + +++++ E
Sbjct: 745 NEE-NERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKE 783
Score = 88 (36.0 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 16/99 (16%), Positives = 46/99 (46%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
+K+ +++ ++ E + K+ + K+ ++ + + + EK+ K + DRK+
Sbjct: 739 EKERKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEK 798
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
R E + + + ++ R++ ++ + E+ E E
Sbjct: 799 ER-KENEEKKRKEKEEKERKEKEEREKQEKEREEKEKQE 836
Score = 88 (36.0 bits), Expect = 7.6e-05, Sum P(3) = 7.6e-05
Identities = 21/100 (21%), Positives = 43/100 (43%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDK-KHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
K++ + + + K K+ +K K +KR + + ENE+ K + D KK
Sbjct: 666 KEEKEKLEREKKEKEKEKEKEKEKEKEKEKKRIEKEKKKIRENEEKERKQKEK---DEKK 722
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ E E + ++ R++N RK + + ++ E
Sbjct: 723 RKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKE 762
Score = 87 (35.7 bits), Expect = 9.6e-05, Sum P(3) = 9.6e-05
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 902 DSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLASTPE 959
++ E + K+ KD K+ K + + ++ EK+R +N R + KK + +
Sbjct: 707 ENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKEK 766
Query: 960 SENESRHKRHR--RDNRNGSRKNGDHEDLEDGE 990
E E + K + ++ RK + +D ++ E
Sbjct: 767 EEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKE 799
Score = 84 (34.6 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 18/100 (18%), Positives = 47/100 (47%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR-KK 950
+K+ + + E D K ++ ++K RK ++ ++ ++ EK R + + ++ +K
Sbjct: 715 QKEKDEKKRKEKEEKDRKEK-EEKEEKERKENEE-NERKEKEEKKRKEKERKEKEEKERK 772
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ E E + R ++ +D + RK + + ++ E
Sbjct: 773 EKEEKEIKEKEEKKRKEKEEKDRKEKERKENEEKKRKEKE 812
Score = 82 (33.9 bits), Expect = 5.8e-05, Sum P(3) = 5.8e-05
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 901 DDSAENDSKRSGKDN-DKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPE 959
DD E+ SK+ K DK+ +K +S ++ +++D SK ++ D+K L + +
Sbjct: 1338 DDDDEDGSKKEEKSKKDKRDKKDKKSKTLTISSDDEDNSKKVEKNKKDKKSKTPLTFSDD 1397
Query: 960 SENESRHKRHRRDNRN 975
+E K R R+
Sbjct: 1398 ESDEEPPKIQTRRRRS 1413
Score = 82 (33.9 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 20/99 (20%), Positives = 48/99 (48%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK+ + + + + KR ++ +K R++ + + E EK++ K R ++KK
Sbjct: 647 KKEKENKLKEKEKKEEEKRK-EEKEKLEREKKEKEKEKEKEKEKEKEKEKKRIEKEKKKI 705
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
R E+E + R ++ + + + ++ D ++ E+ E
Sbjct: 706 R------ENEEKERKQKEKDEKKRKEKEEKDRKEKEEKE 738
Score = 81 (33.6 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 19/108 (17%), Positives = 48/108 (44%)
Query: 892 KKDGADSDHDDSAENDSK-RSGKDNDKKHRK-------RHQSAHDSLDENEKDRSKNPHR 943
+K+ +++ + E K + K+ ++K RK + + ++ EKDR + +
Sbjct: 742 RKENEENERKEKEEKKRKEKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKERK 801
Query: 944 HNSDRK-KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
N ++K K + E E + ++ R + ++ + ++ E+ E
Sbjct: 802 ENEEKKRKEKEEKERKEKEEREKQEKEREEKEKQEKEERERKEKEENE 849
Score = 80 (33.2 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 17/98 (17%), Positives = 45/98 (45%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK-K 950
+K+ + + + E + K + +KK +++ + D EK+R +N + +++ K
Sbjct: 760 EKERKEKEEKERKEKEEKEIKEKEEKKRKEKEEK-----DRKEKERKENEEKKRKEKEEK 814
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
R+ E + + R ++ +++ RK + + D
Sbjct: 815 ERKEKEEREKQEKEREEKEKQEKEERERKEKEENESID 852
Score = 79 (32.9 bits), Expect = 0.00059, Sum P(3) = 0.00059
Identities = 18/100 (18%), Positives = 45/100 (45%)
Query: 893 KDGADSDHDDSAENDSKRSGKDN-DKKHRK-RHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
++ + + +++ KR K+ D+K ++ + + +ENE+ + R +RK+
Sbjct: 706 RENEEKERKQKEKDEKKRKEKEEKDRKEKEEKEEKERKENEENERKEKEEKKRKEKERKE 765
Query: 951 PRRLASTPESENESRHK--RHRRDNRNGSRKNGDHEDLED 988
+ E E + K + R++ RK + ++ E+
Sbjct: 766 KEEKERKEKEEKEIKEKEEKKRKEKEEKDRKEKERKENEE 805
Score = 49 (22.3 bits), Expect = 0.00038, Sum P(3) = 0.00038
Identities = 20/92 (21%), Positives = 42/92 (45%)
Query: 189 QPKSAEGVQTDWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPD 248
+ KS E + + +E + ++ +K+++ FE + E + S D K+
Sbjct: 557 ESKSEEEEEEE-EEEKEEESKKKSSSKQSKKKVTKSKFE--SEHESEEESKDSKKNVKKS 613
Query: 249 GRKYYYNKVTKQSKWSLPDEL--KLAREQAEK 278
K KVT++S L E ++ +E+++K
Sbjct: 614 ASKQSKKKVTQESDEELKSESDEEIKKEKSKK 645
Score = 48 (22.0 bits), Expect = 2.0e-05, Sum P(3) = 2.0e-05
Identities = 17/70 (24%), Positives = 32/70 (45%)
Query: 236 DASTDWKEFTSPDGRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTS 295
+A+ ++K T D ++ N + K+ + S D+ K ++ EK + NS+ S
Sbjct: 318 NANNEFKSIT--DKKQKLSNNIIKKKEESDDDDEKEKEKEKEKNKKLKNSNINKNNSKES 375
Query: 296 ISFPSSVVKA 305
S S K+
Sbjct: 376 QSIKKSPTKS 385
>UNIPROTKB|E1C9K0 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007259 "JAK-STAT cascade" evidence=IEA] [GO:0010390
"histone monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0033523 "histone H2B ubiquitination" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0042169 "SH2
domain binding" evidence=IEA] [GO:0045638 "negative regulation of
myeloid cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0051571 "positive regulation of histone H3-K4
methylation" evidence=IEA] [GO:0070102 "interleukin-6-mediated
signaling pathway" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001711 "endodermal cell fate commitment"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 GO:GO:0045944 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0080182 GO:GO:0007259 GO:GO:0016593 GO:GO:0045638 CTD:9646
KO:K15176 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:AADN02030593 IPI:IPI00580712
RefSeq:XP_420968.3 UniGene:Gga.54718 Ensembl:ENSGALT00000009016
GeneID:423035 KEGG:gga:423035 Uniprot:E1C9K0
Length = 1167
Score = 97 (39.2 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 34/114 (29%), Positives = 53/114 (46%)
Query: 896 ADSDHDDSAENDSKR--SGKDNDKKHRK-------RHQSAHDSLDENEKDRSKNPHRHN- 945
++SD DD + SKR S D+D +++ R S H S ++++ DRS R +
Sbjct: 1037 SNSDSDDGEQQHSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSEEDSDSDRSARKRRRSD 1096
Query: 946 ---SDRKKPRRLAS-TPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
SD + + S + S+NESR D+ S + D+E G G ES
Sbjct: 1097 SEQSDNESVQSGRSHSGGSDNESRPASRSADSDRDSERGSDNEGSGRGS-GNES 1149
Score = 95 (38.5 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 43/170 (25%), Positives = 82/170 (48%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F L + A SD QA + R+
Sbjct: 777 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLL-SQAQYHVARARKQD 835
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 836 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 889
Query: 541 MFEND-ERFKALER-----ERDRKDM--FDDHLDELKQKERAKAQEERKR 582
MF + E K +R R +K FD+ +++ ++ +++++KR
Sbjct: 890 MFTGEVEGSKEKKRGGGGGRRSKKGAGEFDEFVNDDSDEDLPMSRKKKKR 939
Score = 90 (36.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 33/110 (30%), Positives = 49/110 (44%)
Query: 891 SKKDGADSDH----DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNS 946
S D +D D DD +S D +++H KR S DS +N R+K+ S
Sbjct: 1016 SSDDSSDEDKLKIADDGHARNSNSDSDDGEQQHSKRIVSDSDS--DN---RNKS----GS 1066
Query: 947 DRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE-YGGES 995
+ PRR + P SE +S R R R + D+E ++ G + G S
Sbjct: 1067 EAGSPRRSSVHP-SEEDSDSDRSARKRRRSDSEQSDNESVQSGRSHSGGS 1115
Score = 87 (35.7 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 36/120 (30%), Positives = 53/120 (44%)
Query: 890 HSKKDGADSDHDDSAENDS-----KRSG-------KDNDKKHRKRHQSAHDSLDENEKDR 937
HSK+ +DSD D+ ++ S +RS D+D+ RKR +S + D NE +
Sbjct: 1048 HSKRIVSDSDSDNRNKSGSEAGSPRRSSVHPSEEDSDSDRSARKRRRSDSEQSD-NESVQ 1106
Query: 938 SKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE----DGEYGG 993
S H SD + R AS S + R DN R +G+ + E +G GG
Sbjct: 1107 SGRSHSGGSDNES--RPAS--RSADSDRDSERGSDNEGSGRGSGNESEPEGSNNEGSEGG 1162
>GENEDB_PFALCIPARUM|PF10_0135 [details] [associations]
symbol:PF10_0135 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 RefSeq:XP_001347420.2
ProteinModelPortal:Q8IJQ7 IntAct:Q8IJQ7 MINT:MINT-1560502
EnsemblProtists:PF10_0135:mRNA GeneID:810293 KEGG:pfa:PF10_0135
EuPathDB:PlasmoDB:PF3D7_1013800 ProtClustDB:CLSZ2500831
Uniprot:Q8IJQ7
Length = 486
Score = 109 (43.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 892 KKDGADSDHDDS--AENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH--RHNSD 947
KKDG D + DD E++ K K +K K ++ ++ + +D KN H H+ +
Sbjct: 236 KKDGDDDEPDDEHDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEE 295
Query: 948 RKKPRRLASTPESENESRHKRHRRDN--RNGSRKNGDHE 984
K + + E +H+ H+ +N + +K +HE
Sbjct: 296 NHKQKYKEENNKKHQEKQHEEHQNNNNHKENIKKEENHE 334
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 893 KDGADSDHD--DSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
KD D+D D D E D D K + + +S D +N+K + KNPH D +
Sbjct: 154 KDEFDNDDDLIDDEEVDDDVESDDLKNKSKNKSKSKQDEKKKNDK-KKKNPHDTEDDEDE 212
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
L E EN+ + H++ N +K+GD +D D E+ E
Sbjct: 213 D--LNEEDEEENDE-DEEHKKKNEK-KKKDGD-DDEPDDEHDEE 251
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/98 (20%), Positives = 48/98 (48%)
Query: 892 KKDGADSDHDDSAE-NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
KK+ D++ D+ + N+ D D++H+K+++ D++E D + ++KK
Sbjct: 200 KKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDEHDEEDEEKEKKK 259
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+ E N+ + ++ + + + + + DHE E+
Sbjct: 260 KKE--KNKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEE 295
Score = 93 (37.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 25/111 (22%), Positives = 57/111 (51%)
Query: 894 DGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDE-----NEKDRSKNP----HRH 944
D +SD + + +S +D KK+ K+ ++ HD+ D+ NE+D +N H+
Sbjct: 171 DDVESDDLKNKSKNKSKSKQDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKK 230
Query: 945 NSDRKKPRRLASTPESEN----ESRHKRHRRD-NRNGSRKNGDHEDLEDGE 990
+++KK P+ E+ E + K+ +++ N+ + K ++++++ E
Sbjct: 231 KNEKKKKDGDDDEPDDEHDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHE 281
Score = 92 (37.4 bits), Expect = 0.00099, Sum P(2) = 0.00098
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 890 HSKKDGADSD--HDDSAENDSKRSGKDNDKKHRK-----RHQSAHDSLDEN-EKDRSKNP 941
H +D D D +D END K ++K +K HD DE EK + K
Sbjct: 204 HDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDEHDEEDEEKEKKKKKEK 263
Query: 942 HRHNSDRKKPRRLASTPES--ENESRHKRHRRDNRNGSRK--NGDHEDLEDGEY 991
++ +++K + E +N+ H+ H +++ ++ N H++ + E+
Sbjct: 264 NKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEENHKQKYKEENNKKHQEKQHEEH 317
Score = 75 (31.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/143 (23%), Positives = 68/143 (47%)
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ +L E + N ++ + +Q RR+ K + D +L+ S + +
Sbjct: 12 INSLRESQANSNNFILKNNEQIKTLRRVNTKNRKHDINHILDLSFLSKEEKKENDKQNDK 71
Query: 543 END-ERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
+ND E K ++E D K+ ++D ++ K+K K +E+ K N IE ++ E D K +
Sbjct: 72 QNDKENDKENDKEND-KEKYNDKEND-KEKYNDKHKEKNKDNNIE-KENDEHKDH-KNDH 127
Query: 602 QWRKVQDRLEADERCSRLDKMDR 624
+ D+ + D+ ++ +K D+
Sbjct: 128 NTISLLDKGKDDKSKTKNEKQDK 150
Score = 59 (25.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 30/171 (17%), Positives = 73/171 (42%)
Query: 414 EETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRA 473
+ +++ +K +D + E + Y +K + KN + + + D D +
Sbjct: 72 QNDKENDKENDKENDKEKYNDKENDKEKYNDKHKEKNKDNNIEKENDEHKDHKNDHNTIS 131
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQ-DAEERRLKLKKARDDYKKMLEESVELTSS 532
+++ + +T E++ G+ K + D ++ + ++ DD ES +L +
Sbjct: 132 LLDKGKDDKSKTKNEKQDK-----GKNKDEFDNDDDLIDDEEVDDDV-----ESDDLKNK 181
Query: 533 TRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
++ E + K + D +D D+ L+E ++E + +E +K+N
Sbjct: 182 SKNKSKSKQDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKN 232
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 704 TPKDLFEDVVEELQKQFQEDKTRIKDAVKLRK 735
T D ED+ EE +++ ED+ K K +K
Sbjct: 206 TEDDEDEDLNEEDEEENDEDEEHKKKNEKKKK 237
>UNIPROTKB|Q8IJQ7 [details] [associations]
symbol:PF10_0135 "Conserved Plasmodium protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] EMBL:AE014185 RefSeq:XP_001347420.2
ProteinModelPortal:Q8IJQ7 IntAct:Q8IJQ7 MINT:MINT-1560502
EnsemblProtists:PF10_0135:mRNA GeneID:810293 KEGG:pfa:PF10_0135
EuPathDB:PlasmoDB:PF3D7_1013800 ProtClustDB:CLSZ2500831
Uniprot:Q8IJQ7
Length = 486
Score = 109 (43.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 25/99 (25%), Positives = 46/99 (46%)
Query: 892 KKDGADSDHDDS--AENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH--RHNSD 947
KKDG D + DD E++ K K +K K ++ ++ + +D KN H H+ +
Sbjct: 236 KKDGDDDEPDDEHDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEE 295
Query: 948 RKKPRRLASTPESENESRHKRHRRDN--RNGSRKNGDHE 984
K + + E +H+ H+ +N + +K +HE
Sbjct: 296 NHKQKYKEENNKKHQEKQHEEHQNNNNHKENIKKEENHE 334
Score = 107 (42.7 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 32/104 (30%), Positives = 48/104 (46%)
Query: 893 KDGADSDHD--DSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
KD D+D D D E D D K + + +S D +N+K + KNPH D +
Sbjct: 154 KDEFDNDDDLIDDEEVDDDVESDDLKNKSKNKSKSKQDEKKKNDK-KKKNPHDTEDDEDE 212
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
L E EN+ + H++ N +K+GD +D D E+ E
Sbjct: 213 D--LNEEDEEENDE-DEEHKKKNEK-KKKDGD-DDEPDDEHDEE 251
Score = 100 (40.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 20/98 (20%), Positives = 48/98 (48%)
Query: 892 KKDGADSDHDDSAE-NDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
KK+ D++ D+ + N+ D D++H+K+++ D++E D + ++KK
Sbjct: 200 KKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDEHDEEDEEKEKKK 259
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+ E N+ + ++ + + + + + DHE E+
Sbjct: 260 KKE--KNKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEE 295
Score = 93 (37.8 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 25/111 (22%), Positives = 57/111 (51%)
Query: 894 DGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDE-----NEKDRSKNP----HRH 944
D +SD + + +S +D KK+ K+ ++ HD+ D+ NE+D +N H+
Sbjct: 171 DDVESDDLKNKSKNKSKSKQDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKK 230
Query: 945 NSDRKKPRRLASTPESEN----ESRHKRHRRD-NRNGSRKNGDHEDLEDGE 990
+++KK P+ E+ E + K+ +++ N+ + K ++++++ E
Sbjct: 231 KNEKKKKDGDDDEPDDEHDEEDEEKEKKKKKEKNKEKNNKKNNNKNIKPHE 281
Score = 92 (37.4 bits), Expect = 0.00099, Sum P(2) = 0.00098
Identities = 26/114 (22%), Positives = 50/114 (43%)
Query: 890 HSKKDGADSD--HDDSAENDSKRSGKDNDKKHRK-----RHQSAHDSLDEN-EKDRSKNP 941
H +D D D +D END K ++K +K HD DE EK + K
Sbjct: 204 HDTEDDEDEDLNEEDEEENDEDEEHKKKNEKKKKDGDDDEPDDEHDEEDEEKEKKKKKEK 263
Query: 942 HRHNSDRKKPRRLASTPES--ENESRHKRHRRDNRNGSRK--NGDHEDLEDGEY 991
++ +++K + E +N+ H+ H +++ ++ N H++ + E+
Sbjct: 264 NKEKNNKKNNNKNIKPHEDHHKNDHDHEHHEENHKQKYKEENNKKHQEKQHEEH 317
Score = 75 (31.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 33/143 (23%), Positives = 68/143 (47%)
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMF 542
+ +L E + N ++ + +Q RR+ K + D +L+ S + +
Sbjct: 12 INSLRESQANSNNFILKNNEQIKTLRRVNTKNRKHDINHILDLSFLSKEEKKENDKQNDK 71
Query: 543 END-ERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANT 601
+ND E K ++E D K+ ++D ++ K+K K +E+ K N IE ++ E D K +
Sbjct: 72 QNDKENDKENDKEND-KEKYNDKEND-KEKYNDKHKEKNKDNNIE-KENDEHKDH-KNDH 127
Query: 602 QWRKVQDRLEADERCSRLDKMDR 624
+ D+ + D+ ++ +K D+
Sbjct: 128 NTISLLDKGKDDKSKTKNEKQDK 150
Score = 59 (25.8 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 30/171 (17%), Positives = 73/171 (42%)
Query: 414 EETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRA 473
+ +++ +K +D + E + Y +K + KN + + + D D +
Sbjct: 72 QNDKENDKENDKENDKEKYNDKENDKEKYNDKHKEKNKDNNIEKENDEHKDHKNDHNTIS 131
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQ-DAEERRLKLKKARDDYKKMLEESVELTSS 532
+++ + +T E++ G+ K + D ++ + ++ DD ES +L +
Sbjct: 132 LLDKGKDDKSKTKNEKQDK-----GKNKDEFDNDDDLIDDEEVDDDV-----ESDDLKNK 181
Query: 533 TRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
++ E + K + D +D D+ L+E ++E + +E +K+N
Sbjct: 182 SKNKSKSKQDEKKKNDKKKKNPHDTEDDEDEDLNEEDEEENDEDEEHKKKN 232
Score = 38 (18.4 bits), Expect = 3.3e-05, Sum P(3) = 3.3e-05
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 704 TPKDLFEDVVEELQKQFQEDKTRIKDAVKLRK 735
T D ED+ EE +++ ED+ K K +K
Sbjct: 206 TEDDEDEDLNEEDEEENDEDEEHKKKNEKKKK 237
>MGI|MGI:1914934 [details] [associations]
symbol:Luc7l3 "LUC7-like 3 (S. cerevisiae)" species:10090
"Mus musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003729
"mRNA binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0006915 "apoptotic
process" evidence=ISO] [GO:0006950 "response to stress"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=ISO]
MGI:MGI:1914934 GO:GO:0005886 GO:GO:0005634 GO:GO:0006915
GO:GO:0006950 GO:GO:0008380 GO:GO:0003677 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0005925 EMBL:AL645965
eggNOG:COG5200 HOVERGEN:HBG062167 InterPro:IPR004882
PANTHER:PTHR12375 Pfam:PF03194 GeneTree:ENSGT00700000104035
HOGENOM:HOG000215956 CTD:51747 OMA:ISVPLWK OrthoDB:EOG4QJRNZ
ChiTaRS:LUC7L3 EMBL:AK014362 EMBL:AK019464 EMBL:AK084714
EMBL:AK151228 EMBL:AK151839 EMBL:AL645846 EMBL:BC009092
IPI:IPI00122418 IPI:IPI00649422 IPI:IPI00752942 RefSeq:NP_080589.1
UniGene:Mm.30927 ProteinModelPortal:Q5SUF2 IntAct:Q5SUF2
STRING:Q5SUF2 PhosphoSite:Q5SUF2 PaxDb:Q5SUF2 PRIDE:Q5SUF2
Ensembl:ENSMUST00000021226 Ensembl:ENSMUST00000107820
Ensembl:ENSMUST00000107821 Ensembl:ENSMUST00000166312 GeneID:67684
KEGG:mmu:67684 UCSC:uc007kyh.1 UCSC:uc007kyi.1 UCSC:uc007kyj.1
NextBio:325251 Bgee:Q5SUF2 CleanEx:MM_3300001P08RIK
Genevestigator:Q5SUF2 GermOnline:ENSMUSG00000020863 Uniprot:Q5SUF2
Length = 432
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 252
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 253 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNS-DRKKPR---RLASTPE 959
E K +D +++ R R +S H S + + RS++ R S DR++ R R S
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRDRRRSRSRDRRRSRSH 336
Query: 960 SENESRHKRHRRDNRNGS---RKNGDHEDLE-DGEYGGESR 996
+E +H+ RD R RK+ H D E +S+
Sbjct: 337 DRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSK 377
Score = 87 (35.7 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S + E+DR SK + SD KK +S+
Sbjct: 336 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKKGSDDKKSSVKSSS 395
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
E ++E + + D +N NG ED++ +G+
Sbjct: 396 REKQSEDTNPESKESDTKN--EVNGTSEDIKSEGD 428
Score = 80 (33.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 29/106 (27%), Positives = 47/106 (44%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS + ++ R +R +HD + + RS++ R S
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRDRRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE----D 985
DRK K R + E + +S+ K + D++ S K+ E D
Sbjct: 357 DRKSYKHRSKSRDREQDRKSKEKEKKGSDDKKSSVKSSSREKQSED 402
>UNIPROTKB|Q3SX41 [details] [associations]
symbol:LUC7L3 "Luc7-like protein 3" species:9913 "Bos
taurus" [GO:0008380 "RNA splicing" evidence=ISS] [GO:0006950
"response to stress" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0003729 "mRNA binding" evidence=ISS] [GO:0006915
"apoptotic process" evidence=ISS] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
GO:GO:0005886 GO:GO:0005634 GO:GO:0006915 GO:GO:0006950
GO:GO:0008380 GO:GO:0003677 GO:GO:0016607 GO:GO:0003729
GO:GO:0006397 GO:GO:0005925 eggNOG:COG5200 HOVERGEN:HBG062167
InterPro:IPR004882 PANTHER:PTHR12375 Pfam:PF03194
GeneTree:ENSGT00700000104035 HOGENOM:HOG000215956 EMBL:BC104519
IPI:IPI00715642 RefSeq:NP_001029856.1 UniGene:Bt.1595 STRING:Q3SX41
PRIDE:Q3SX41 Ensembl:ENSBTAT00000002938 GeneID:539955
KEGG:bta:539955 CTD:51747 InParanoid:Q3SX41 OMA:ISVPLWK
OrthoDB:EOG4QJRNZ NextBio:20878323 Uniprot:Q3SX41
Length = 432
Score = 93 (37.8 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 27/103 (26%), Positives = 53/103 (51%)
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
GA +G+ ++ +++L K+ + + +++ ++ +K EE R K
Sbjct: 196 GAFLIVGDAQSRVDDHLMGKQHMGYAKIKATVEELKEKLRKRTEEP---DRDERLKKEKQ 252
Query: 541 MFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
E +ER K ERER+ ++ +E ++KERA+ +E RKR+
Sbjct: 253 --EREEREKEREREREERERKRRREEEEREKERARDRERRKRS 293
Score = 88 (36.0 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 29/95 (30%), Positives = 43/95 (45%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDR-SKNPHRHNSDRKKPRRLAST 957
HD S RS K R R H S + E+DR SK + SD KK +S+
Sbjct: 336 HDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSSS 395
Query: 958 PESENESRHKRHRR-DNRNGSRKNGDHEDLE-DGE 990
E ++E + + D +N NG ED++ +G+
Sbjct: 396 REKQSEDTNTESKESDTKN--EVNGTSEDIKSEGD 428
Score = 85 (35.0 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 23/95 (24%), Positives = 43/95 (45%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEK-DRSKNPHRHNSDRKKPRRLASTPESENE 963
E K +D +++ R R +S H S + + RS++ H R + RR + + +
Sbjct: 277 EEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRD---HKRSRSRERRRSRSRDRRRS 333
Query: 964 SRHKRHRRDNRNGSR--KNGDHEDLEDGEYGGESR 996
H R R +R+ SR + D + ++ +SR
Sbjct: 334 RSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSR 368
Score = 82 (33.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHR---KRHQSAHDSLDENEKDRSKNPHRHNS- 946
S+ SD S D KRS ++ R +R +HD + + RS++ R S
Sbjct: 297 SRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRRSKSR 356
Query: 947 DRK--KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHE----D 985
DRK K R + E + +S+ K R D++ S K+ E D
Sbjct: 357 DRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSSSREKQSED 402
>MGI|MGI:1914171 [details] [associations]
symbol:Prpf38b "PRP38 pre-mRNA processing factor 38 (yeast)
domain containing B" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008380 "RNA splicing" evidence=IEA] MGI:MGI:1914171
Pfam:PF03371 GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
EMBL:AL671894 GeneTree:ENSGT00700000104061 InterPro:IPR005037
PANTHER:PTHR23142 CTD:55119 eggNOG:NOG266713 HOGENOM:HOG000115682
KO:K12850 OrthoDB:EOG4NKBWJ OMA:SIEPESQ ChiTaRS:PRPF38B
EMBL:AK003895 EMBL:AK015938 EMBL:AK018126 EMBL:BC050900
EMBL:BC052077 IPI:IPI00320636 RefSeq:NP_080121.1 UniGene:Mm.51049
ProteinModelPortal:Q80SY5 STRING:Q80SY5 PhosphoSite:Q80SY5
PaxDb:Q80SY5 PRIDE:Q80SY5 Ensembl:ENSMUST00000029480 GeneID:66921
KEGG:mmu:66921 UCSC:uc008qzx.1 InParanoid:Q80SY5 NextBio:323021
Bgee:Q80SY5 Genevestigator:Q80SY5 Uniprot:Q80SY5
Length = 542
Score = 108 (43.1 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 31/98 (31%), Positives = 45/98 (45%)
Query: 892 KKDGADSDH-DDSAENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
K+D D H DD E+ K S + ++KHR R ++A KD+S H++ S K
Sbjct: 405 KEDKEDRRHRDDKKESKKKHSRSRSRERKHRSRSRNAGKRSRSRSKDKSSR-HKNESKEK 463
Query: 950 KPRRLASTPESENESRHKRHRRDN--RNGSRKNGDHED 985
+R S + S KR R + R SRK +D
Sbjct: 464 ANKRSRSGSQGRTGSVEKRKREHSPSREKSRKRSRSQD 501
Score = 105 (42.0 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 31/108 (28%), Positives = 51/108 (47%)
Query: 890 HSKKDGADSDHDDSAENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR 948
HS+ + H + N KRS + DK R +++S + N++ RS + R S
Sbjct: 424 HSRSRSRERKHRSRSRNAGKRSRSRSKDKSSRHKNESKEKA---NKRSRSGSQGRTGSVE 480
Query: 949 KK-----PRRLASTPESENESR-HKRHRRDNRNGSRKNGDHEDLEDGE 990
K+ P R S S ++ R HKR D+++ S + DH+ + GE
Sbjct: 481 KRKREHSPSREKSRKRSRSQDRSHKREHNDSKDQSDRQ-DHQSSQSGE 527
Score = 97 (39.2 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
S+ DG + H + E+ R +D+ K+ +K+H + S + + RS+N + + R K
Sbjct: 395 SRGDGEEKKHKEDKED---RRHRDDKKESKKKHSRSR-SRERKHRSRSRNAGKRSRSRSK 450
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSR-KNGDHE 984
+ + +NES+ K ++R +R+GS+ + G E
Sbjct: 451 DK----SSRHKNESKEKANKR-SRSGSQGRTGSVE 480
Score = 73 (30.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 31/124 (25%), Positives = 59/124 (47%)
Query: 507 ERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR---KDMFDD 563
+R L+ +K R +++ E+ E R S+++ + R ++ ER R R +D D
Sbjct: 293 DRELEREKER---QRLEREAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGD 349
Query: 564 HLDELKQKERAKAQEERKRNIIEYRKFLESC---DFIKANTQWRKVQDRLEADERCSRLD 620
D + +ER K E +R +Y K S D ++ + ++ + R + +E+ + D
Sbjct: 350 RRD--RDREREKENERGRRRDRDYDKERGSDRERDRERSRERSKEQRSRGDGEEKKHKED 407
Query: 621 KMDR 624
K DR
Sbjct: 408 KEDR 411
Score = 65 (27.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 33/131 (25%), Positives = 59/131 (45%)
Query: 499 QKKKQDAEERRLK-LKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDR 557
+ K+++ E RR + + + D + E S +R K + ER K ER R R
Sbjct: 308 EAKEREKERRRSRSIDRGLDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRR 367
Query: 558 KDMFDDHL--DELKQKERAK--AQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEAD 613
+D D + +ER++ ++E+R R E +K E K + + R D+ E+
Sbjct: 368 DRDYDKERGSDRERDRERSRERSKEQRSRGDGEEKKHKED----KEDRRHR--DDKKESK 421
Query: 614 ERCSRLDKMDR 624
++ SR +R
Sbjct: 422 KKHSRSRSRER 432
>UNIPROTKB|J9NRQ6 [details] [associations]
symbol:CYLC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005200 "structural constituent of
cytoskeleton" evidence=IEA] InterPro:IPR026189 GO:GO:0005200
PANTHER:PTHR16742 GeneTree:ENSGT00690000102102 EMBL:AAEX03008007
Ensembl:ENSCAFT00000049333 OMA:WMTRSLL Uniprot:J9NRQ6
Length = 453
Score = 102 (41.0 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 907 DSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESRH 966
D K+ K + KK +K + + +S E+E D K+ + KK + ST ESE+E +
Sbjct: 279 DEKKGTKKDAKKEKKGSKKSKESATESE-DEKKDAKKEKKGSKKSK--GSTIESEDEKKD 335
Query: 967 KRHRRDNRNGSRKNGDHEDLEDGEYG 992
+ +D + S+K G+ +D + G
Sbjct: 336 AKMDKDGKKDSKKLGEKDDQSKDKKG 361
Score = 77 (32.2 bits), Expect = 4.4e-05, Sum P(2) = 4.4e-05
Identities = 40/186 (21%), Positives = 73/186 (39%)
Query: 399 SDLVGASDKVPPPVTEETRKDAVRG--EKVSDALEEKTVEQEHFAYANKLEAKNAFKALL 456
SD + A + PP + + +KDA EK + + K +++ A+ +KLE++ L
Sbjct: 82 SDYLAARSQ-PPYKSYKWKKDAKVADVEKPTSPIAGKKDKEDKQAHKDKLESETESTVLK 140
Query: 457 ESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKAR 516
E + D+ + + A + K + G++ ++E+ + KK R
Sbjct: 141 EPKITKTKPMKDRDIERGTKGEKDVAKTDAKKEKKDLKK--GKESATESEDEKKGPKKER 198
Query: 517 DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKA 576
KK E E + K + A E E ++K + K KE A
Sbjct: 199 KASKKGKESGTESEDEKKGPKKEKKAPKKGKESATESEDEKKGPKKERKASKKGKESATE 258
Query: 577 QEERKR 582
E+ K+
Sbjct: 259 SEDEKK 264
>GENEDB_PFALCIPARUM|PF11_0486 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:5833
"Plasmodium falciparum" [GO:0016020 "membrane" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] [GO:0020007 "apical
complex" evidence=TAS] InterPro:IPR003298 Pfam:PF02430
GO:GO:0009405 GO:GO:0016020 EMBL:AE014186 HSSP:P04268 GO:GO:0020007
RefSeq:XP_001348153.1 ProteinModelPortal:Q8IHP3
EnsemblProtists:PF11_0486:mRNA GeneID:811029 KEGG:pfa:PF11_0486
EuPathDB:PlasmoDB:PF3D7_1147800.1 HOGENOM:HOG000065870
ProtClustDB:PTZ00121 InterPro:IPR021620 Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 133 (51.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 80/341 (23%), Positives = 140/341 (41%)
Query: 414 EETRKDAV-RGEKV-SDALEEKTVEQE-HFAYANKLE-AKNAFKALLESANVGSDWTWDQ 469
+E R +AV R E+V D E K E+E + K E A+ A A ++A +
Sbjct: 1205 DEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKAD 1264
Query: 470 ALRAIINDRRYGALRTLGERKTA--FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESV 527
L+ ++ L+ E+K A + +KKK D +++ + KK D+ KK EE
Sbjct: 1265 ELKKAEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKK 1324
Query: 528 ---ELTSSTRWSKAVTMFENDERFKA--LERERDRK--DMFDDHLDELKQKERAKAQEER 580
E+ + KA + +++E+ KA L++ ++K D +E K+ + K + E
Sbjct: 1325 KADEVKKAEEKKKADELKKSEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEE 1384
Query: 581 KRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE---RCSRLDKMDRLEIFXXXXXXXXX 637
K+ E +K E KA+ +K +++ +ADE + K D L+
Sbjct: 1385 KKKADELKKKAEEKK--KADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKAEN 1442
Query: 638 XXXXXXXXXXXXXSKT--ERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMA 695
K E+K DE +K E L K + ++K A
Sbjct: 1443 LKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKK-----A 1497
Query: 696 VASNTSGSTPKDLFEDVVEELQKQFQEDKT-RIKDAVKLRK 735
+ K + +EL+K ++ K +K A +L+K
Sbjct: 1498 EEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEELKK 1538
Score = 60 (26.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/73 (19%), Positives = 32/73 (43%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHD--SLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN 962
E ++K + KK + + A + +E EK +++ + ++KK +L E E
Sbjct: 1635 EEENKIKAEQLKKKEEEEKKKAEELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEK 1694
Query: 963 ESRHKRHRRDNRN 975
+ + + + N
Sbjct: 1695 KKAEQLKKEEEEN 1707
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/76 (17%), Positives = 33/76 (43%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHD-SLDENEKDRSKNPHRHNSDRKKPRRLASTPESENE 963
E + K+ ++ K+ + + A +E EK + + + + KK E EN+
Sbjct: 1649 EEEEKKKAEELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENK 1708
Query: 964 SRHKRHRRDNRNGSRK 979
+ ++ +++ +K
Sbjct: 1709 IKVEQLKKEEEEEKKK 1724
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/84 (22%), Positives = 37/84 (44%)
Query: 913 KDNDKKHR----KRHQSAHDSLDENEKDRSKNPHRHNSDR--KKPRRLASTPESE-NES- 964
K D+K R K+ + D+ + ++ +KN N + + + + T + NE+
Sbjct: 1765 KKEDEKRRMEVEKKIKDTKDNFENIQEGNNKNTPYINKEMFDSEIKEVVITKNMQLNEAD 1824
Query: 965 RHKRHRRDNRNGSRKNGDHEDLED 988
++H +N S KN D +D
Sbjct: 1825 AFEKHNSENSKSSNKNADFSKEKD 1848
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/86 (16%), Positives = 36/86 (41%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
E + K + K+ ++ ++ +E EK + + + + KK E EN+
Sbjct: 1581 EEEKKMKAEQLKKEEEEKIKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKI 1640
Query: 965 RHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ ++ ++ +K + + E+ E
Sbjct: 1641 KAEQLKKKEEEEKKKAEELKKEEEEE 1666
Score = 50 (22.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 896 ADSDHDDSAENDSKRSGKDND-KKHRKRHQSAHDSL---DENEKDRSKNPHRHNSDRK 949
AD+ ++EN SK S K+ D K + + +++ DENEK + R N++ K
Sbjct: 1823 ADAFEKHNSEN-SKSSNKNADFSKEKDLLEDDIENILETDENEKINKDDIERSNNNMK 1879
Score = 49 (22.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/92 (18%), Positives = 36/92 (39%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH---RHNSDRKKPRRLASTPESE 961
E + K+ + KK + + A E E+++ K + ++KK L E E
Sbjct: 1607 EEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEEKKKAEELKKEEEEE 1666
Query: 962 NESRH--KRHRRDNRNGSR-KNGDHEDLEDGE 990
+ K+ + + + K + E+ + E
Sbjct: 1667 KKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAE 1698
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSL---DENEKDRSKNPHRHNSDRKKPRRLASTPESE 961
E + K+ + KK + ++ + L +E EK +++ + ++KK ++L E +
Sbjct: 1690 EEEEKKKAEQL-KKEEEENKIKVEQLKKEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKK 1748
Query: 962 NESRHK 967
E K
Sbjct: 1749 AEEIRK 1754
>UNIPROTKB|Q8IHP3 [details] [associations]
symbol:PF11_0486 "MAEBL, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0008150 "biological_process"
evidence=ND] [GO:0020007 "apical complex" evidence=TAS]
InterPro:IPR003298 Pfam:PF02430 GO:GO:0009405 GO:GO:0016020
EMBL:AE014186 HSSP:P04268 GO:GO:0020007 RefSeq:XP_001348153.1
ProteinModelPortal:Q8IHP3 EnsemblProtists:PF11_0486:mRNA
GeneID:811029 KEGG:pfa:PF11_0486 EuPathDB:PlasmoDB:PF3D7_1147800.1
HOGENOM:HOG000065870 ProtClustDB:PTZ00121 InterPro:IPR021620
Pfam:PF11556 Uniprot:Q8IHP3
Length = 2055
Score = 133 (51.9 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 80/341 (23%), Positives = 140/341 (41%)
Query: 414 EETRKDAV-RGEKV-SDALEEKTVEQE-HFAYANKLE-AKNAFKALLESANVGSDWTWDQ 469
+E R +AV R E+V D E K E+E + K E A+ A A ++A +
Sbjct: 1205 DEKRIEAVKRAEEVRKDEEEAKRAEKERNNEEIRKFEEARMAHFARRQAAIKAEEKRKAD 1264
Query: 470 ALRAIINDRRYGALRTLGERKTA--FNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESV 527
L+ ++ L+ E+K A + +KKK D +++ + KK D+ KK EE
Sbjct: 1265 ELKKAEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKK 1324
Query: 528 ---ELTSSTRWSKAVTMFENDERFKA--LERERDRK--DMFDDHLDELKQKERAKAQEER 580
E+ + KA + +++E+ KA L++ ++K D +E K+ + K + E
Sbjct: 1325 KADEVKKAEEKKKADELKKSEEKKKADELKKSEEKKKADELKKKAEEKKKADELKKKAEE 1384
Query: 581 KRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE---RCSRLDKMDRLEIFXXXXXXXXX 637
K+ E +K E KA+ +K +++ +ADE + K D L+
Sbjct: 1385 KKKADELKKKAEEKK--KADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKAEN 1442
Query: 638 XXXXXXXXXXXXXSKT--ERKNRDEFRKLMEADVALGTLTAKTNWRDYCIKVKDSPPYMA 695
K E+K DE +K E L K + ++K A
Sbjct: 1443 LKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKKKAEEKKKADELKK-----A 1497
Query: 696 VASNTSGSTPKDLFEDVVEELQKQFQEDKT-RIKDAVKLRK 735
+ K + +EL+K ++ K +K A +L+K
Sbjct: 1498 EEKKKADELKKAEEKKKADELKKAEEKKKADELKKAEELKK 1538
Score = 60 (26.2 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 14/73 (19%), Positives = 32/73 (43%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHD--SLDENEKDRSKNPHRHNSDRKKPRRLASTPESEN 962
E ++K + KK + + A + +E EK +++ + ++KK +L E E
Sbjct: 1635 EEENKIKAEQLKKKEEEEKKKAEELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEK 1694
Query: 963 ESRHKRHRRDNRN 975
+ + + + N
Sbjct: 1695 KKAEQLKKEEEEN 1707
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/76 (17%), Positives = 33/76 (43%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHD-SLDENEKDRSKNPHRHNSDRKKPRRLASTPESENE 963
E + K+ ++ K+ + + A +E EK + + + + KK E EN+
Sbjct: 1649 EEEEKKKAEELKKEEEEEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENK 1708
Query: 964 SRHKRHRRDNRNGSRK 979
+ ++ +++ +K
Sbjct: 1709 IKVEQLKKEEEEEKKK 1724
Score = 54 (24.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/84 (22%), Positives = 37/84 (44%)
Query: 913 KDNDKKHR----KRHQSAHDSLDENEKDRSKNPHRHNSDR--KKPRRLASTPESE-NES- 964
K D+K R K+ + D+ + ++ +KN N + + + + T + NE+
Sbjct: 1765 KKEDEKRRMEVEKKIKDTKDNFENIQEGNNKNTPYINKEMFDSEIKEVVITKNMQLNEAD 1824
Query: 965 RHKRHRRDNRNGSRKNGDHEDLED 988
++H +N S KN D +D
Sbjct: 1825 AFEKHNSENSKSSNKNADFSKEKD 1848
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/86 (16%), Positives = 36/86 (41%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENES 964
E + K + K+ ++ ++ +E EK + + + + KK E EN+
Sbjct: 1581 EEEKKMKAEQLKKEEEEKIKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKI 1640
Query: 965 RHKRHRRDNRNGSRKNGDHEDLEDGE 990
+ ++ ++ +K + + E+ E
Sbjct: 1641 KAEQLKKKEEEEKKKAEELKKEEEEE 1666
Score = 50 (22.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 896 ADSDHDDSAENDSKRSGKDND-KKHRKRHQSAHDSL---DENEKDRSKNPHRHNSDRK 949
AD+ ++EN SK S K+ D K + + +++ DENEK + R N++ K
Sbjct: 1823 ADAFEKHNSEN-SKSSNKNADFSKEKDLLEDDIENILETDENEKINKDDIERSNNNMK 1879
Score = 49 (22.3 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 17/92 (18%), Positives = 36/92 (39%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH---RHNSDRKKPRRLASTPESE 961
E + K+ + KK + + A E E+++ K + ++KK L E E
Sbjct: 1607 EEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEEKKKAEELKKEEEEE 1666
Query: 962 NESRH--KRHRRDNRNGSR-KNGDHEDLEDGE 990
+ K+ + + + K + E+ + E
Sbjct: 1667 KKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAE 1698
Score = 47 (21.6 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 905 ENDSKRSGKDNDKKHRKRHQSAHDSL---DENEKDRSKNPHRHNSDRKKPRRLASTPESE 961
E + K+ + KK + ++ + L +E EK +++ + ++KK ++L E +
Sbjct: 1690 EEEEKKKAEQL-KKEEEENKIKVEQLKKEEEEEKKKAEELKKEEEEKKKVQQLKKEEEKK 1748
Query: 962 NESRHK 967
E K
Sbjct: 1749 AEEIRK 1754
>UNIPROTKB|Q86X95 [details] [associations]
symbol:CIR1 "Corepressor interacting with RBPJ 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=TAS] EMBL:AF098297
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0005815
GO:GO:0003705 CTD:9541 KO:K06066 InterPro:IPR019339 Pfam:PF10197
SMART:SM01083 EMBL:U03644 EMBL:AK292389 EMBL:AC018470 EMBL:BC015040
EMBL:BC021175 EMBL:BC038987 EMBL:BC046098 IPI:IPI00743170
IPI:IPI00749452 PIR:G01227 RefSeq:NP_004873.3 UniGene:Hs.632531
ProteinModelPortal:Q86X95 IntAct:Q86X95 MINT:MINT-207899
STRING:Q86X95 PhosphoSite:Q86X95 DMDM:74727790 PaxDb:Q86X95
PRIDE:Q86X95 Ensembl:ENST00000342016 Ensembl:ENST00000362053
GeneID:9541 KEGG:hsa:9541 UCSC:uc002uim.3 GeneCards:GC02M175212
H-InvDB:HIX0023923 HGNC:HGNC:24217 HPA:HPA015784 MIM:605228
neXtProt:NX_Q86X95 PharmGKB:PA165696415 eggNOG:NOG303270
InParanoid:Q86X95 OMA:YKQREIR PhylomeDB:Q86X95 ChiTaRS:CIR1
GenomeRNAi:9541 NextBio:35776 ArrayExpress:Q86X95 Bgee:Q86X95
Genevestigator:Q86X95 GermOnline:ENSG00000138433 Uniprot:Q86X95
Length = 450
Score = 96 (38.9 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 32/96 (33%), Positives = 44/96 (45%)
Query: 900 HDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLAST 957
H+ S E DSK S D+DKK R H+ + + K+ S H S R + R S
Sbjct: 341 HESSRE-DSKWSHSDSDKKSRT-HKHSPEKRGSERKEGSSRSHGREERSRRSRSRSPGSY 398
Query: 958 PESENESRHKRH---RRDNRNGSRKNGDHEDLEDGE 990
+ E R +R+ + RN SR +G DL GE
Sbjct: 399 KQRETRKRAQRNPGEEQSRRNDSRSHGT--DLYRGE 432
Score = 81 (33.6 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 20/86 (23%), Positives = 50/86 (58%)
Query: 499 QKKKQDAEERRLKLKKARDDYKK-----MLEESVELTSSTRWSKAVTMFENDERFKALER 553
+KKK+ + ++ K +K+R +KK S +SST S++ + E++ + K ++R
Sbjct: 232 EKKKKKKDRKKKKFQKSRSKHKKHKSSSSSSSSSSSSSSTETSESSSESESNNKEKKIQR 291
Query: 554 ERDRKDMFDDHLD-ELKQKERAKAQE 578
++ +K+ H + + ++K+++K ++
Sbjct: 292 KKRKKNKCSGHNNSDSEEKDKSKKRK 317
>RGD|1311097 [details] [associations]
symbol:Ctr9 "Ctr9, Paf1/RNA polymerase II complex component,
homolog (S. cerevisiae)" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0001711 "endodermal cell
fate commitment" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0007259 "JAK-STAT cascade" evidence=ISO] [GO:0010390 "histone
monoubiquitination" evidence=ISO] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0035327 "transcriptionally active
chromatin" evidence=ISO] [GO:0042169 "SH2 domain binding"
evidence=ISO] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=ISO] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 Pfam:PF00515 PROSITE:PS50293
RGD:1311097 GO:GO:0045944 GO:GO:0071222 GO:GO:0000122
eggNOG:COG0457 Gene3D:1.25.40.10 GO:GO:0019827 GO:GO:0035327
GO:GO:0051571 GO:GO:0032968 GO:GO:0033523 GO:GO:0010390
GO:GO:0080182 GO:GO:0007259 GO:GO:0016593 GO:GO:0001711
GO:GO:0045638 HOGENOM:HOG000246926 GO:GO:0070102 GO:GO:2001162
UniGene:Rn.102000 EMBL:BC107916 IPI:IPI00371679 STRING:Q32PZ5
PhosphoSite:Q32PZ5 UCSC:RGD:1311097 InParanoid:Q32PZ5
ArrayExpress:Q32PZ5 Genevestigator:Q32PZ5 Uniprot:Q32PZ5
Length = 493
Score = 93 (37.8 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 45/169 (26%), Positives = 82/169 (48%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFK-ALLES-ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F AL S A SD QA + R+
Sbjct: 97 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLL-SQAQYHVARARKQD 155
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 156 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 209
Query: 541 MFEND-ERFKALER-----ERDRKD-MFDDHLDELKQKERAKAQEERKR 582
MF + E K +R R +K FD+ +++ + +++++KR
Sbjct: 210 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKKR 258
Score = 85 (35.0 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 891 SKKDGADSDHDDSAENDS-KRSGK-------DNDKKHRKRHQSAHDSLDENEKDRSKNPH 942
S+ D D+ + +E S +RSG+ D+D+ RKR +S + D ++P
Sbjct: 373 SESDSDDNQNKSGSEAGSPRRSGRQESDEDSDSDQPSRKRRRSGSEQSDNESAQSGRSPS 432
Query: 943 RHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHE--DLEDGEYGGE 994
+ + R ++ + ES++ES + GS + E + E + G E
Sbjct: 433 GGSENENDSRPVSPSAESDHESEQGSDNEGSGQGSGNESEPEGSNNEASDRGSE 486
Score = 84 (34.6 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 891 SKKDGADSDHDDSA-ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
S D +D D A E + S D+D R +++ +E D N ++ S+
Sbjct: 336 SSDDSSDEDKLKIADEGHPRNSNSDSDDDERPNRRAS------SESDSDDNQNKSGSEAG 389
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
PRR E+ + R+ R+GS ++ D+E + G
Sbjct: 390 SPRRSGRQESDEDSDSDQPSRKRRRSGSEQS-DNESAQSG 428
Score = 82 (33.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/117 (27%), Positives = 49/117 (41%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR- 948
H + +DSD DD N S D+D K S ++ R ++ +SD+
Sbjct: 353 HPRNSNSDSD-DDERPNRRASSESDSDDNQNK---SGSEAGSPRRSGRQESDEDSDSDQP 408
Query: 949 KKPRRLASTPESENES----RHKRHRRDNRNGSRK-----NGDHEDLE--DGEYGGE 994
+ RR + + +S+NES R +N N SR DHE + D E G+
Sbjct: 409 SRKRRRSGSEQSDNESAQSGRSPSGGSENENDSRPVSPSAESDHESEQGSDNEGSGQ 465
>RGD|735202 [details] [associations]
symbol:Arhgap27 "Rho GTPase activating protein 27" species:10116
"Rattus norvegicus" [GO:0005096 "GTPase activator activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA;IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0017124 "SH3 domain
binding" evidence=IDA] [GO:0030675 "Rac GTPase activator activity"
evidence=IDA] [GO:0032855 "positive regulation of Rac GTPase
activity" evidence=IDA] [GO:0043089 "positive regulation of Cdc42
GTPase activity" evidence=IDA] Pfam:PF00169 InterPro:IPR000198
InterPro:IPR001202 InterPro:IPR001452 InterPro:IPR001849
InterPro:IPR008936 Pfam:PF00397 Pfam:PF00620 PROSITE:PS01159
PROSITE:PS50002 PROSITE:PS50003 PROSITE:PS50020 PROSITE:PS50238
SMART:SM00233 SMART:SM00324 SMART:SM00326 SMART:SM00456
EMBL:AY394725 RGD:735202 GO:GO:0006898 GO:GO:0005737 GO:GO:0007165
GO:GO:0016020 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0017124 GO:GO:0005622
SUPFAM:SSF50044 GO:GO:0030675 Gene3D:2.20.70.10 SUPFAM:SSF51045
GO:GO:0043089 eggNOG:NOG279563 InterPro:IPR015767 PANTHER:PTHR23181
HOGENOM:HOG000294167 HOVERGEN:HBG005328 CTD:201176
OrthoDB:EOG4X3H0P IPI:IPI00400617 RefSeq:NP_942054.1
UniGene:Rn.17895 HSSP:Q8C863 ProteinModelPortal:Q6TLK4
STRING:Q6TLK4 PhosphoSite:Q6TLK4 PRIDE:Q6TLK4 GeneID:303583
KEGG:rno:303583 InParanoid:Q6TLK4 NextBio:651663
ArrayExpress:Q6TLK4 Genevestigator:Q6TLK4 Uniprot:Q6TLK4
Length = 869
Score = 133 (51.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 200 WKEHTSAD-GRRYYFNKRTRVSTWDKPFEL-----MTTIERADAS------TDWKEFTSP 247
W+ HT A GR YY+N T V+TW+ PFE T RA T+W ++
Sbjct: 252 WETHTDAGTGRPYYYNPDTGVTTWESPFEAPEGATSPTTSRASVGSGESLETEWGQYWDE 311
Query: 248 D-GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
+ GR ++YN +T ++ W E +L + E+ ++ + S SP Q
Sbjct: 312 ESGRVFFYNPLTGETVWEDETE-ELEDDPEEQLEMQPSLSPRSPGQQ 357
>UNIPROTKB|Q6TLK4 [details] [associations]
symbol:Arhgap27 "Rho GTPase-activating protein 27"
species:10116 "Rattus norvegicus" [GO:0005543 "phospholipid
binding" evidence=IEA] [GO:0007165 "signal transduction"
evidence=IEA] Pfam:PF00169 InterPro:IPR000198 InterPro:IPR001202
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR008936
Pfam:PF00397 Pfam:PF00620 PROSITE:PS01159 PROSITE:PS50002
PROSITE:PS50003 PROSITE:PS50020 PROSITE:PS50238 SMART:SM00233
SMART:SM00324 SMART:SM00326 SMART:SM00456 EMBL:AY394725 RGD:735202
GO:GO:0006898 GO:GO:0005737 GO:GO:0007165 GO:GO:0016020
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0017124 GO:GO:0005622 SUPFAM:SSF50044
GO:GO:0030675 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0043089
eggNOG:NOG279563 InterPro:IPR015767 PANTHER:PTHR23181
HOGENOM:HOG000294167 HOVERGEN:HBG005328 CTD:201176
OrthoDB:EOG4X3H0P IPI:IPI00400617 RefSeq:NP_942054.1
UniGene:Rn.17895 HSSP:Q8C863 ProteinModelPortal:Q6TLK4
STRING:Q6TLK4 PhosphoSite:Q6TLK4 PRIDE:Q6TLK4 GeneID:303583
KEGG:rno:303583 InParanoid:Q6TLK4 NextBio:651663
ArrayExpress:Q6TLK4 Genevestigator:Q6TLK4 Uniprot:Q6TLK4
Length = 869
Score = 133 (51.9 bits), Expect = 7.8e-05, P = 7.8e-05
Identities = 34/107 (31%), Positives = 53/107 (49%)
Query: 200 WKEHTSAD-GRRYYFNKRTRVSTWDKPFEL-----MTTIERADAS------TDWKEFTSP 247
W+ HT A GR YY+N T V+TW+ PFE T RA T+W ++
Sbjct: 252 WETHTDAGTGRPYYYNPDTGVTTWESPFEAPEGATSPTTSRASVGSGESLETEWGQYWDE 311
Query: 248 D-GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
+ GR ++YN +T ++ W E +L + E+ ++ + S SP Q
Sbjct: 312 ESGRVFFYNPLTGETVWEDETE-ELEDDPEEQLEMQPSLSPRSPGQQ 357
>UNIPROTKB|E2RSR5 [details] [associations]
symbol:EIF3A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005852 "eukaryotic translation initiation
factor 3 complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0001732 "formation of translation initiation
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005730 GO:GO:0003743 GO:GO:0005852 KO:K03254
OMA:QDRDEND GeneTree:ENSGT00690000102108 GO:GO:0001732 CTD:8661
EMBL:AAEX03015577 EMBL:AAEX03015578 RefSeq:XP_852131.1
Ensembl:ENSCAFT00000019160 GeneID:486914 KEGG:cfa:486914
Uniprot:E2RSR5
Length = 1350
Score = 100 (40.3 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E + W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERRITYHREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 93 (37.8 bits), Expect = 0.00042, Sum P(3) = 0.00042
Identities = 34/140 (24%), Positives = 71/140 (50%)
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKL---KKARDDYKKMLEESVELT 530
++ DR +R R++ + E L Q +++ AEER +L K+ R + +++ +
Sbjct: 753 MLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYHREKEE 812
Query: 531 SSTRWSKAVTMFENDERFKALERERDRKDM--FDDHLDELKQKERAKAQ-----EERKRN 583
R ++ + E +ER +A ER + +++ + + + +L++ ER K Q EER+R
Sbjct: 813 EEQRRAEEQMLKEREERERA-ERAKREEELREYQERVKKLEEVERKKRQRELEIEERERR 871
Query: 584 IIEYRKFLESCDFIKANTQW 603
E R+ L + +++W
Sbjct: 872 REEERR-LGDDPLSRKDSRW 890
Score = 80 (33.2 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 25/94 (26%), Positives = 41/94 (43%)
Query: 897 DSDHDDSAEN-DSKRSGKDNDKKH-RKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRL 954
+ + + EN D + KD +K+ R+R + D + +DR + P R+ P
Sbjct: 1167 EKERERERENQDRDENDKDPEKERDRERERERDRERDGDREDRFRRPRDEGGWRRGPAEE 1226
Query: 955 ASTPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
+S+ N R R R D R R+ D DL +
Sbjct: 1227 SSSWRDSNR-REDRDRDDRR---RERDDRRDLRE 1256
Score = 71 (30.1 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 26/97 (26%), Positives = 39/97 (40%)
Query: 905 ENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESE-- 961
E + +R G+D ++ HR+ DE E++ S P D + PRR
Sbjct: 915 EKEWRRGEGRDEERPHRREEDRPRRLGDEEERESSLRP----DDDRIPRRGMDDDRGPRR 970
Query: 962 --NESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
+E R R D+ S +N D +D G E R
Sbjct: 971 GLDEDRFSRRGADDDRPSWRNAD-DDRPPRRIGDEDR 1006
Score = 54 (24.1 bits), Expect = 8.2e-05, Sum P(3) = 8.2e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>DICTYBASE|DDB_G0271832 [details] [associations]
symbol:DDB_G0271832 "Zinc finger CCHC
domain-containing protein 7" species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
PROSITE:PS50158 SMART:SM00343 dictyBase:DDB_G0271832 GO:GO:0008270
GO:GO:0003676 EMBL:AAFI02000006 Gene3D:4.10.60.10 SUPFAM:SSF57756
RefSeq:XP_645525.1 ProteinModelPortal:Q55AJ7
EnsemblProtists:DDB0216923 GeneID:8618154 KEGG:ddi:DDB_G0271832
eggNOG:NOG260401 InParanoid:Q55AJ7 Uniprot:Q55AJ7
Length = 772
Score = 103 (41.3 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 22/103 (21%), Positives = 56/103 (54%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKD-NDKKHRKRHQSAHDSLDENEKDRSKNPHR-HNSD 947
++ + + +++ +++ N +K S ++ NDKK +K+++ + E EKD+ H+ D
Sbjct: 563 NNNDNNSSNNNKNNSNNSNKESSEEKNDKKKKKKNKKGNQE-KEKEKDKKDKNHKTRERD 621
Query: 948 RKKPRRLASTPE-----SENESRHKRHRRDNRNGSRKNGDHED 985
R+K + S + + N +++K + ++N N + N ++ +
Sbjct: 622 REKDNDIDSMVDLDKVKNNNNNKNKNNNKNNNNNNNNNNNNNN 664
Score = 101 (40.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/106 (24%), Positives = 56/106 (52%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKD--RSKNPHRHNSDRKK 950
+DG+D D++D +ND + KD+ + K+ +++H++ + N + S N +++NS+
Sbjct: 525 QDGSD-DYNDDDQNDYRV--KDSYSRKSKKQKTSHNNNNNNNNNDNNSSNNNKNNSNN-- 579
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
S ES E K+ ++ N+ G+++ +D +D + R
Sbjct: 580 -----SNKESSEEKNDKKKKKKNKKGNQEKEKEKDKKDKNHKTRER 620
Score = 79 (32.9 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 25/84 (29%), Positives = 49/84 (58%)
Query: 504 DAEERRLKLKKARDDYKK-MLEESVELTSSTRWSKAVTMFENDE---RFKALERERDRKD 559
D EE+ + +K + KK +E+++L+SS+ S + + N+ R ++ ++D+KD
Sbjct: 58 DLEEQSEEFEKEYNKLKKEQKQENLKLSSSSSSSSSSSNNNNNNNNNRDNTIKDKKDKKD 117
Query: 560 MFD--DHLDELKQKERAKAQEERK 581
D D D+ K+KE+ K ++E+K
Sbjct: 118 KKDKKDKKDK-KEKEKEKDKKEKK 140
>UNIPROTKB|F1S4P6 [details] [associations]
symbol:EIF3A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0001732 "formation of translation initiation complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005730 GO:GO:0003743 GO:GO:0005852 OMA:QDRDEND
GeneTree:ENSGT00690000102108 GO:GO:0001732 EMBL:CU407047
Ensembl:ENSSSCT00000011680 Uniprot:F1S4P6
Length = 1378
Score = 98 (39.6 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E + W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 93 (37.8 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 34/140 (24%), Positives = 71/140 (50%)
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKL---KKARDDYKKMLEESVELT 530
++ DR +R R++ + E L Q +++ AEER +L K+ R + +++ +
Sbjct: 753 MLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEE 812
Query: 531 SSTRWSKAVTMFENDERFKALERERDRKDM--FDDHLDELKQKERAKAQ-----EERKRN 583
R ++ + E +ER +A ER + +++ + + + +L++ ER K Q EER+R
Sbjct: 813 EEQRRAEEQMLKEREERERA-ERAKREEELREYQERVKKLEEVERKKRQRELEIEERERR 871
Query: 584 IIEYRKFLESCDFIKANTQW 603
E R+ E + +++W
Sbjct: 872 REEERRLGED-PLSRKDSRW 890
Score = 82 (33.9 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 25/94 (26%), Positives = 42/94 (44%)
Query: 899 DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLAST- 957
D + E + R +D D+ R+ + D + E+DR ++ R + R+ PR
Sbjct: 1191 DREWDREKERDRDNQDRDENEREPERD-RDRERDRERDRDRDGDREDRFRR-PRDEGGWR 1248
Query: 958 --PESENESRHKRHRRDNRN-GSRKNGDHEDLED 988
P E+ S RRD+R+ R+ D DL +
Sbjct: 1249 RGPAEESSSWRDASRRDDRDRDDRRRDDRRDLRE 1282
Score = 78 (32.5 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 25/92 (27%), Positives = 41/92 (44%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLAS 956
D D+ D EN+ + +D D R+R + D + +DR + P R+ P +S
Sbjct: 1201 DRDNQDRDENE-REPERDRD---RERDRERDRDRDGDREDRFRRPRDEGGWRRGPAEESS 1256
Query: 957 T--PESENESRHKR-HRRDNRNGSRKNGDHED 985
+ S + R + RRD+R R+ D D
Sbjct: 1257 SWRDASRRDDRDRDDRRRDDRRDLRERRDDRD 1288
Score = 54 (24.1 bits), Expect = 8.9e-05, Sum P(3) = 8.9e-05
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>TAIR|locus:2012843 [details] [associations]
symbol:AT1G10320 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR003954 InterPro:IPR009145
InterPro:IPR012677 Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102
PROSITE:PS50103 SMART:SM00356 SMART:SM00361 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0000166 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
EMBL:AC005489 EMBL:AK226684 IPI:IPI00524917 RefSeq:NP_172503.1
UniGene:At.51551 HSSP:Q01081 ProteinModelPortal:Q9SY74 SMR:Q9SY74
PRIDE:Q9SY74 EnsemblPlants:AT1G10320.1 GeneID:837571
KEGG:ath:AT1G10320 GeneFarm:4542 TAIR:At1g10320 eggNOG:NOG304335
HOGENOM:HOG000083070 InParanoid:Q9SY74 OMA:CSRKHVY PhylomeDB:Q9SY74
ProtClustDB:CLSN2679568 Genevestigator:Q9SY74 PANTHER:PTHR12620
Uniprot:Q9SY74
Length = 757
Score = 99 (39.9 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 26/84 (30%), Positives = 39/84 (46%)
Query: 897 DSDHDDSAENDSK---RSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRR 953
D++ D S+ R G DK+ H H D++ ++RSK HRH +R R
Sbjct: 594 DNEKDRKTHRSSRKHSREGSSADKEEGHEHDRVHTVSDKSHRERSK--HRH--ERSSSRY 649
Query: 954 LASTPESENESRHKRHRRDNRNGS 977
S E ESRH +H+ ++ S
Sbjct: 650 --SHEEDSTESRHHQHKESDKKRS 671
Score = 93 (37.8 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 30/106 (28%), Positives = 46/106 (43%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSD-- 947
H + S +DS E+ + K++DKK R S + ++DRSK R+ SD
Sbjct: 642 HERSSSRYSHEEDSTESRHHQH-KESDKK-RSVETSPVGYQSDKDRDRSKQRQRYKSDDP 699
Query: 948 RKKPRRLASTPESENESR--HKRHRRDNRNGSR-KNGDHEDLEDGE 990
R EN R HK R +R R +N D ++ ++ E
Sbjct: 700 ESDQSRKGKRQSEENSDRETHKERRHRHRKRRRTQNSDDQNPKESE 745
Score = 92 (37.4 bits), Expect = 0.00052, Sum P(3) = 0.00052
Identities = 29/114 (25%), Positives = 60/114 (52%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHD---SLDENEKDRSKNPHRHNS 946
HS+ +G+ +D ++ E+D R +DK HR+R + H+ S +E+D +++ H +
Sbjct: 608 HSR-EGSSADKEEGHEHD--RVHTVSDKSHRERSKHRHERSSSRYSHEEDSTESRHHQHK 664
Query: 947 DRKKPRRLASTP---ESENE-SRHKRHRR---------DNRNGSRKNGDHEDLE 987
+ K R + ++P +S+ + R K+ +R +R G R++ ++ D E
Sbjct: 665 ESDKKRSVETSPVGYQSDKDRDRSKQRQRYKSDDPESDQSRKGKRQSEENSDRE 718
Score = 82 (33.9 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 36/133 (27%), Positives = 66/133 (49%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER--FKALERERD 556
Q +++ EER ++A + K+ EES E KA M ++R K L+R++
Sbjct: 3 QANEKEEEERH---EEAAGE-KESFEESKE--------KAAEMSRKEKRKAMKKLKRKQV 50
Query: 557 RKDMFDDHLDELKQKERAKAQEERKRNIIEY---RKFLESCDFIKANTQWRKVQD--RLE 611
RK++ +E K K A++ER + I E R+ E DF ++ WR+ + R +
Sbjct: 51 RKEIAAKEREEAKAKLNDPAEQERLKAIEEEDARRREKELKDFEESERAWREAMEIKRKK 110
Query: 612 ADERCSRLDKMDR 624
+E ++ ++ +R
Sbjct: 111 EEEEEAKREEEER 123
Score = 44 (20.5 bits), Expect = 9.8e-05, Sum P(3) = 9.8e-05
Identities = 10/26 (38%), Positives = 17/26 (65%)
Query: 714 EELQKQFQEDKTRIKDAVKLRKITLS 739
EE + + +E++ R KD +LRK+ S
Sbjct: 112 EEEEAKREEEERRWKDLEELRKLEAS 137
>UNIPROTKB|F1S6V3 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0042169 "SH2 domain binding" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0033523
"histone H2B ubiquitination" evidence=IEA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0007259
"JAK-STAT cascade" evidence=IEA] [GO:0001711 "endodermal cell fate
commitment" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0045944 GO:GO:0071222 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0019827
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0080182 GO:GO:0007259 GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:CU606995
Ensembl:ENSSSCT00000014646 Uniprot:F1S6V3
Length = 1173
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 28/100 (28%), Positives = 50/100 (50%)
Query: 891 SKKDGADSDHDDSAENDSKRSG-KDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
S D +D D A+ R G D+D+ R+R ++ +S E++++++K+ S R+
Sbjct: 1018 SSDDSSDEDKLKIADEGHARHGHSDSDEGDRRRKGASSES--ESDENQNKSGSEAGSPRR 1075
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
PRR P S+ +S + R R + D+E L+ G
Sbjct: 1076 -PRR----PRSDEDSDSDQPARKRRPSGSEQSDNESLQSG 1110
Score = 91 (37.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F L + A SD QA + R+
Sbjct: 779 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLL-SQAQYHVARARKQD 837
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 838 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 891
Query: 541 MFEND-ERFKALER-----ERDRK----DMF--DDHLDEL---KQKERAK 575
MF + E K +R R +K D F DD D+L K+K+R K
Sbjct: 892 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRK 941
>UNIPROTKB|A6QPU2 [details] [associations]
symbol:ARHGAP12 "ARHGAP12 protein" species:9913 "Bos
taurus" [GO:0007165 "signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] Pfam:PF00169 InterPro:IPR000198 InterPro:IPR001202
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR008936
Pfam:PF00397 Pfam:PF00620 PROSITE:PS50002 PROSITE:PS50003
PROSITE:PS50020 PROSITE:PS50238 SMART:SM00233 SMART:SM00324
SMART:SM00326 SMART:SM00456 GO:GO:0007165 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 SUPFAM:SSF50044 GeneTree:ENSGT00700000104029
Gene3D:2.20.70.10 SUPFAM:SSF51045 eggNOG:NOG279563
InterPro:IPR015767 PANTHER:PTHR23181 HOGENOM:HOG000294167
HOVERGEN:HBG005328 CTD:94134 OMA:GQVYIEV EMBL:DAAA02035598
EMBL:BC149489 IPI:IPI00866997 RefSeq:NP_001095711.1
UniGene:Bt.75443 SMR:A6QPU2 STRING:A6QPU2
Ensembl:ENSBTAT00000016846 GeneID:540393 KEGG:bta:540393
NextBio:20878606 Uniprot:A6QPU2
Length = 793
Score = 132 (51.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/87 (28%), Positives = 45/87 (51%)
Query: 196 VQTDWKEHTSADGRRYYFNKRTRVSTWDKP-FELMTTIERADAST----DWKEFTSPDGR 250
+ +W+ H + GR YY+N+ T+ TW P + T + D+ + +W + GR
Sbjct: 266 INGEWETHKDSSGRCYYYNRGTQERTWKPPRWTRDTNTSKGDSQSPGDQEWLKHVDDQGR 325
Query: 251 KYYYNKVTKQSKWSLPDELKLAREQAE 277
+YYY+ +S+W LP +++Q E
Sbjct: 326 QYYYSADGSRSEWELPKYNASSQQQRE 352
Score = 48 (22.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/48 (27%), Positives = 23/48 (47%)
Query: 928 DSLDENEKDRSKNPHRHNS--DRKKPRRLASTPESENESRHKRHRRDN 973
D E E S +H+ D+K+P++L S S +S ++ + N
Sbjct: 529 DEAIEEEIPDSPGIEKHDKEKDQKEPKKLRSAKVSSIDSSEQKKTKKN 576
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 909 KRSGKDNDKKHRKRHQSAH-DSLDENEKDRSK 939
++ K+ D+K K+ +SA S+D +E+ ++K
Sbjct: 543 EKHDKEKDQKEPKKLRSAKVSSIDSSEQKKTK 574
>UNIPROTKB|F1N5D0 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005730 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:DAAA02074879 IPI:IPI01017474 Ensembl:ENSBTAT00000027211
Uniprot:F1N5D0
Length = 474
Score = 92 (37.4 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 40/143 (27%), Positives = 68/143 (47%)
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
L K + +Y KK+ ++RR +L + RD EE E + A+T E +
Sbjct: 14 LFSEKLSHKKYRAALKKEKRKKRRQELARLRDSGLSQKEEEEEAVTD-----ALTE-EQE 67
Query: 546 ERFKALERERDRKDMFDDHL-DELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWR 604
E + LERER + + ++ L E K +E + ++E++ RK E + K +W
Sbjct: 68 EEERLLERERQK--LHEEWLLREQKAQEEFRIKKEKEEAA---RKRQEEQER-KLKEEWE 121
Query: 605 KVQDRLEADERCSRL-DKMDRLE 626
+ Q R E +E +L +K +R E
Sbjct: 122 E-QQRKEREEEQQKLQEKKEREE 143
Score = 84 (34.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/109 (29%), Positives = 46/109 (42%)
Query: 894 DGADSDHDDSAENDSKRSGKDND---KKHRKRHQS---AHDSLDENEKDRSKNPHRHNSD 947
D S S+E + R G ND ++ R+R +S AH E DR K+ RH +
Sbjct: 360 DRTGSSFGKSSERRA-RLGPHNDYYSRRRRRRRRSPGLAHSYKRNGEADR-KSSRRHGA- 416
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
KKP + S + SR + +RD G R + H + SR
Sbjct: 417 -KKPHKHRSRSRGRHSSRSRGRKRDRIRG-RGSRSHSRRSRSQSSSRSR 463
Score = 75 (31.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
HS K ++D S+R G KHR R + H S + R ++ R R
Sbjct: 398 HSYKRNGEADR-----KSSRRHGAKKPHKHRSRSRGRHSS---RSRGRKRDRIRGRGSRS 449
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSR 978
RR S++ SR + H R+GSR
Sbjct: 450 HSRR----SRSQSSSRSRSHG-GRRSGSR 473
>MGI|MGI:95301 [details] [associations]
symbol:Eif3a "eukaryotic translation initiation factor 3,
subunit A" species:10090 "Mus musculus" [GO:0001732 "formation of
translation initiation complex" evidence=ISO;IDA] [GO:0003743
"translation initiation factor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=ISO;IDA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 MGI:MGI:95301
GO:GO:0005730 GO:GO:0005815 GO:GO:0003743 GO:GO:0005852
eggNOG:NOG236708 HOGENOM:HOG000246822 KO:K03254 OMA:QDRDEND
HAMAP:MF_03000 GeneTree:ENSGT00690000102108 HOVERGEN:HBG006128
GO:GO:0001732 CTD:8661 OrthoDB:EOG4B2SWM ChiTaRS:EIF3A EMBL:U14172
EMBL:AC163019 EMBL:X84651 EMBL:X17373 IPI:IPI00129276 PIR:S13800
PIR:T42637 RefSeq:NP_034253.3 UniGene:Mm.2238 UniGene:Mm.482533
ProteinModelPortal:P23116 IntAct:P23116 MINT:MINT-1860578
STRING:P23116 PhosphoSite:P23116 PaxDb:P23116 PRIDE:P23116
Ensembl:ENSMUST00000025955 GeneID:13669 KEGG:mmu:13669
UCSC:uc008ibx.1 InParanoid:P23116 NextBio:284428 Bgee:P23116
Genevestigator:P23116 GermOnline:ENSMUSG00000024991 Uniprot:P23116
Length = 1344
Score = 102 (41.0 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 52/209 (24%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E V W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRVKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R S+
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHSRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EDRKRQRKEERKITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 95 (38.5 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 35/140 (25%), Positives = 71/140 (50%)
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKL---KKARDDYKKMLEESVELT 530
++ DR +R R++ + E L Q +++ AEER +L K+ R + +K+ +
Sbjct: 753 MLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHSRLEDRKRQRKEERKITYYREKEE 812
Query: 531 SSTRWSKAVTMFENDERFKALERERDRKDM--FDDHLDELKQKERAKAQ-----EERKRN 583
R ++ + E +ER +A ER + +++ + + + +L++ ER K Q EER+R
Sbjct: 813 EEQRRAEEQMLKEREERERA-ERAKREEELREYQERVKKLEEVERKKRQRELEIEERERR 871
Query: 584 IIEYRKFLESCDFIKANTQW 603
E R+ L + +++W
Sbjct: 872 REEERR-LGDDPLSRKDSRW 890
Score = 76 (31.8 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 21/79 (26%), Positives = 36/79 (45%)
Query: 914 DNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR-KKPRRLAST---PESENESRHKRH 969
D DK+ + +Q ++ + E+DR + DR ++PR P E+ S
Sbjct: 1165 DRDKEKDRDNQDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSS 1224
Query: 970 RRDNRNGSRKNGDHEDLED 988
RRD+R+ + D +D D
Sbjct: 1225 RRDDRDREDRRRDRDDRRD 1243
Score = 73 (30.8 bits), Expect = 0.00025, Sum P(3) = 0.00025
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSA--HDSLDENE--KDRSKNPHRHNSDR 948
+D ++D D + D +R G D+ R R + +E+ +D S+ R DR
Sbjct: 1175 QDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDREDR 1234
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNG 981
++ R + + R R RRD R+ + G
Sbjct: 1235 RRDR------DDRRDLRDLRDRRDLRDDRDRRG 1261
Score = 54 (24.1 bits), Expect = 0.00012, Sum P(3) = 0.00012
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>UNIPROTKB|E1B7R4 [details] [associations]
symbol:EIF3A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005852 "eukaryotic translation initiation factor 3
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0001732 "formation of translation initiation complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0005730 GO:GO:0003743 GO:GO:0005852 OMA:QDRDEND
GeneTree:ENSGT00690000102108 GO:GO:0001732 EMBL:DAAA02059385
IPI:IPI00924034 Ensembl:ENSBTAT00000061515 Uniprot:E1B7R4
Length = 1378
Score = 97 (39.2 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E + W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERRITYYREKEEEEQRRAEEKMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 92 (37.4 bits), Expect = 0.00045, Sum P(3) = 0.00045
Identities = 34/140 (24%), Positives = 71/140 (50%)
Query: 474 IINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKL---KKARDDYKKMLEESVELT 530
++ DR +R R++ + E L Q +++ AEER +L K+ R + +++ +
Sbjct: 753 MLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEE 812
Query: 531 SSTRWSKAVTMFENDERFKALERERDRKDM--FDDHLDELKQKERAKAQ-----EERKRN 583
R ++ + E +ER +A ER + +++ + + + +L++ ER K Q EER+R
Sbjct: 813 EEQRRAEEKMLKEREERERA-ERAKREEELREYQERVKKLEEVERKKRQRELEIEERERR 871
Query: 584 IIEYRKFLESCDFIKANTQW 603
E R+ L + +++W
Sbjct: 872 REEERR-LGDDSLSRKDSRW 890
Score = 81 (33.6 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 30/104 (28%), Positives = 45/104 (43%)
Query: 893 KDGADS-DHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR-KK 950
+D S D + E + R +D D+ R + D E E+DR ++ R DR ++
Sbjct: 1184 RDSRPSEDREWEREKERDRDNQDRDENDRDPERE-RDRERERERDRERDGDR--DDRFRR 1240
Query: 951 PRRLAST---PESENESRHKRHRRDNRNGS---RKNGDHEDLED 988
PR P E+ S RRD+R+ R+ D DL D
Sbjct: 1241 PRDEGGWRRGPAEESSSWRDASRRDDRDRDDRRRERDDRRDLRD 1284
Score = 54 (24.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>DICTYBASE|DDB_G0291063 [details] [associations]
symbol:thoc2 "putative THO2 protein" species:44689
"Dictyostelium discoideum" [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0044351 "macropinocytosis" evidence=RCA] dictyBase:DDB_G0291063
GenomeReviews:CM000154_GR EMBL:AAFI02000174 eggNOG:NOG270898
KO:K12879 InterPro:IPR021418 InterPro:IPR021726 Pfam:PF11262
Pfam:PF11732 OMA:SFYTKFI RefSeq:XP_635459.2
ProteinModelPortal:Q54F78 STRING:Q54F78 EnsemblProtists:DDB0233558
GeneID:8627959 KEGG:ddi:DDB_G0291063 ProtClustDB:CLSZ2848575
Uniprot:Q54F78
Length = 2110
Score = 104 (41.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 23/89 (25%), Positives = 41/89 (46%)
Query: 894 DGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRR 953
D D + D+ N S ND + R+ +Q D+ D N + ++N +D + R+
Sbjct: 1718 DRRDRGNQDNINNRDNNSNNRNDNRERQPNQ---DNRDNNNNNSNRNERNDRNDSSRERQ 1774
Query: 954 LASTPESENESRHKRHRRDNRNGSRKNGD 982
N+SR ++ RDNR +++ D
Sbjct: 1775 --DNRNERNDSRERQDTRDNRKDQQRDND 1801
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 28/108 (25%), Positives = 45/108 (41%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
++ DG S S ++ SK SG D++ ++ +S EN +D N + +
Sbjct: 1564 NNNNDGGGSGSSRSDKSSSKDSGSKKDQQTPRKEIEKSESR-ENIRDSRSNDNNQSLSSS 1622
Query: 950 KPRRLASTPESENESRHKRHR-RDNRNGSRKNGDHEDLEDGEYGGESR 996
+ R E E R K R +D N R N D D + + G + R
Sbjct: 1623 REIRERDKELKEKEQREKEQRDKDRENRERDNRDVRDSRNDQRGNQER 1670
Score = 97 (39.2 bits), Expect = 0.00080, Sum P(3) = 0.00080
Identities = 25/96 (26%), Positives = 45/96 (46%)
Query: 897 DSDHDDSAENDSK--RSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRH-NSDRKKPRR 953
D++++DS + + R +DND++ R + ++ D N +R+ N R N D +
Sbjct: 1697 DNNNNDSQQQQQQQQRRQQDNDRRDRGNQDNINNR-DNNSNNRNDNRERQPNQDNRDNNN 1755
Query: 954 LASTPESENESRHK-RHRRDNRNGSRKNGDHEDLED 988
S N+ R R+DNRN + + +D D
Sbjct: 1756 NNSNRNERNDRNDSSRERQDNRNERNDSRERQDTRD 1791
Score = 90 (36.7 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 33/127 (25%), Positives = 61/127 (48%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRK 558
+K+K+ +ER + +K R+ K+ E E K ER + ERER+R+
Sbjct: 1435 EKEKEREKEREREREKEREKEKEK-EREREREREREREKERDREREKERERERERERERE 1493
Query: 559 DMFDDHLDELKQKERAKAQE-ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCS 617
+ ++ K+KER + +E ER+R R+ + K + ++ ++R E ++R
Sbjct: 1494 REREREKEKEKEKEREREREREREREREREREREREREKEKERDREQREKER-EREQREK 1552
Query: 618 RLDKMDR 624
D+ DR
Sbjct: 1553 ERDRSDR 1559
Score = 83 (34.3 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 29/128 (22%), Positives = 59/128 (46%)
Query: 500 KKKQDAEERRLKLKKAR-DDYKKMLEESVELTSSTRWSKAVTMFENDERFKALE-RERDR 557
+K+ + E R ++ +R +D + L S E+ + K E ++R K E RERD
Sbjct: 1595 RKEIEKSESRENIRDSRSNDNNQSLSSSREIRERDKELKEKEQREKEQRDKDRENRERDN 1654
Query: 558 KDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCS 617
+D+ D D+ +ER + +++R + ++ + D + Q + + +R
Sbjct: 1655 RDVRDSRNDQRGNQERDGGEPQQRRQQQQQQQERDRNDIRNQDNNNNDSQQQQQQQQRRQ 1714
Query: 618 R-LDKMDR 624
+ D+ DR
Sbjct: 1715 QDNDRRDR 1722
Score = 43 (20.2 bits), Expect = 0.00016, Sum P(3) = 0.00016
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 249 GRKYYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSS 308
G KY Y + +Q + +K EQ ++A+ + ++ +S T+ + ++ P+S
Sbjct: 246 GFKYQYYQ--QQQHLQI-QHIKQQLEQQQQAAAAAPTTTSTTDSTTTTAATTTPTTTPAS 302
Query: 309 A 309
A
Sbjct: 303 A 303
>UNIPROTKB|C9JVK6 [details] [associations]
symbol:WAC "WW domain-containing adapter protein with
coiled-coil" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 GO:GO:0005681
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AL161936 EMBL:AL358234
HGNC:HGNC:17327 ChiTaRS:WAC HOGENOM:HOG000169503 IPI:IPI00925490
ProteinModelPortal:C9JVK6 SMR:C9JVK6 STRING:C9JVK6
Ensembl:ENST00000442148 ArrayExpress:C9JVK6 Bgee:C9JVK6
Uniprot:C9JVK6
Length = 173
Score = 115 (45.5 bits), Expect = 0.00016, P = 0.00016
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKY 252
DW EH S+ G++YY+N RT VS W+KP E + +R + + P R Y
Sbjct: 89 DWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDRDY 142
>MGI|MGI:1916903 [details] [associations]
symbol:Arhgap27 "Rho GTPase activating protein 27"
species:10090 "Mus musculus" [GO:0005096 "GTPase activator
activity" evidence=ISO] [GO:0005543 "phospholipid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005768 "endosome" evidence=ISO]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0006898
"receptor-mediated endocytosis" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0017124 "SH3 domain binding" evidence=ISO] [GO:0030675 "Rac
GTPase activator activity" evidence=ISO] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=ISO] [GO:0043089
"positive regulation of Cdc42 GTPase activity" evidence=ISO]
Pfam:PF00169 InterPro:IPR000198 InterPro:IPR001202
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR008936
Pfam:PF00397 Pfam:PF00620 PROSITE:PS01159 PROSITE:PS50002
PROSITE:PS50003 PROSITE:PS50020 PROSITE:PS50238 SMART:SM00233
SMART:SM00324 SMART:SM00326 SMART:SM00456 MGI:MGI:1916903
GO:GO:0006898 GO:GO:0005737 GO:GO:0007165 GO:GO:0016020
Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0017124 GO:GO:0005622 SUPFAM:SSF50044
GeneTree:ENSGT00700000104029 GO:GO:0030675 Gene3D:2.20.70.10
SUPFAM:SSF51045 GO:GO:0043089 eggNOG:NOG279563 InterPro:IPR015767
PANTHER:PTHR23181 EMBL:AL662804 EMBL:AL772325 HOGENOM:HOG000294167
HOVERGEN:HBG005328 CTD:201176 OMA:KGYIRDQ OrthoDB:EOG4X3H0P
EMBL:AK046763 EMBL:BC096671 IPI:IPI00648511 IPI:IPI00886308
RefSeq:NP_001192165.1 RefSeq:NP_598476.2 UniGene:Mm.259113
UniGene:Mm.397197 UniGene:Mm.399816 ProteinModelPortal:A2AB59
SMR:A2AB59 PhosphoSite:A2AB59 PaxDb:A2AB59 PRIDE:A2AB59
Ensembl:ENSMUST00000041385 Ensembl:ENSMUST00000107024 GeneID:544817
KEGG:mmu:544817 UCSC:uc007lud.1 InParanoid:A2AB59 ChiTaRS:ARHGAP27
NextBio:412048 Bgee:A2AB59 CleanEx:MM_ARHGAP27
Genevestigator:A2AB59 Uniprot:A2AB59
Length = 869
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 33/107 (30%), Positives = 54/107 (50%)
Query: 200 WKEHT-SADGRRYYFNKRTRVSTWDKPFELM--TT---IERADAS------TDWKEFTSP 247
W+ HT + GR YY+N T V+TW+ PFE TT RA T+W ++
Sbjct: 252 WETHTDTGTGRPYYYNPDTGVTTWESPFETPEGTTSPATSRASVGSGESLETEWGQYWDE 311
Query: 248 DGRK-YYYNKVTKQSKWSLPDELKLAREQAEKASIKGTQSETSPNSQ 293
+ R+ ++YN +T ++ W E +L + E+ ++ + S SP Q
Sbjct: 312 ESRRVFFYNPLTGETAWEDETE-ELEEDHQEQLEMQPSLSPRSPGQQ 357
>ZFIN|ZDB-GENE-050309-102 [details] [associations]
symbol:itsn2b "intersectin 2b" species:7955 "Danio
rerio" [GO:0035023 "regulation of Rho protein signal transduction"
evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] Pfam:PF00018 Pfam:PF00169
InterPro:IPR000219 InterPro:IPR000008 InterPro:IPR000261
InterPro:IPR001452 InterPro:IPR001849 InterPro:IPR002048
InterPro:IPR008973 InterPro:IPR011992 InterPro:IPR027029
Pfam:PF00168 Pfam:PF00621 PRINTS:PR00452 PROSITE:PS50002
PROSITE:PS50003 PROSITE:PS50010 PROSITE:PS50031 PROSITE:PS50222
SMART:SM00027 SMART:SM00054 SMART:SM00233 SMART:SM00239
SMART:SM00325 SMART:SM00326 Prosite:PS00018
ZFIN:ZDB-GENE-050309-102 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005622 InterPro:IPR000108 PRINTS:PR00499
SUPFAM:SSF50044 GO:GO:0005089 Gene3D:1.20.900.10 InterPro:IPR018029
SUPFAM:SSF49562 SUPFAM:SSF48065 PROSITE:PS50004 GO:GO:0035023
InterPro:IPR011511 Pfam:PF07653 GeneTree:ENSGT00700000104202
PANTHER:PTHR11216:SF29 EMBL:CR628334 IPI:IPI00505629
RefSeq:NP_001003547.2 UniGene:Dr.26309 ProteinModelPortal:F1R0Z9
Ensembl:ENSDART00000087111 GeneID:445153 KEGG:dre:445153 CTD:445153
NextBio:20831915 ArrayExpress:F1R0Z9 Bgee:F1R0Z9 Uniprot:F1R0Z9
Length = 1741
Score = 123 (48.4 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 62/258 (24%), Positives = 124/258 (48%)
Query: 372 DVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALE 431
D +G++ ++ + + L ++S + + A+ K EE KD + K+ + L
Sbjct: 547 DFKRKLGQSTSEQQ--KLTDKLRSLSLNSVPTATVKTLQNNMEE--KD-LSCRKLKEQLN 601
Query: 432 EKTVEQEHFA-YANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERK 490
VE+E A A+ + K + L ES + + LR I ++ +R L +RK
Sbjct: 602 --AVEKETAAKLADMDQYKKDIQDLRESQRMQESAL--EKLRTIKEEK----IRELKKRK 653
Query: 491 TAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKA 550
E L +K++++ E++R+KL+K R +K+ + E + + + E +ER +
Sbjct: 654 ---QEELEKKRREEEEQKRIKLEKERQWQEKLRRDEEEKQRKIQEERDAKLREEEERERQ 710
Query: 551 LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQD-R 609
R + K+ + +++ER + +EE +R E R+ LE D + + + RK+++ R
Sbjct: 711 A-RLQAAKEQAERERKAREEEERRRREEEEERREQERRR-LEEEDRRRRDEERRKLEEER 768
Query: 610 LEADERCSRL-DKMDRLE 626
+ +E +L D+ R E
Sbjct: 769 RKLEEERRKLEDERKRQE 786
Score = 70 (29.7 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 16/89 (17%), Positives = 42/89 (47%)
Query: 901 DDSAENDSKRSGKDNDKK-HRKRHQSAHDSLDEN--EKDRS-KNPHRHNSDRKKPRRLAS 956
++ E + KR ++ +++ HR + + D+ + E++R K R + + RR
Sbjct: 811 EERREEERKREREEEERRRHRAQEAAMRDAEERKRIEEERKRKEEERRKQEEEDRRRREE 870
Query: 957 TPESENESRHKRHRRDNRNGSRKNGDHED 985
++E R ++ +++ +R D ++
Sbjct: 871 EQRKQDEERKRKQQQEEAAAARLRDDEQN 899
Score = 69 (29.3 bits), Expect = 0.00023, Sum P(3) = 0.00023
Identities = 13/85 (15%), Positives = 34/85 (40%)
Query: 901 DDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPES 960
D+ + R ++ +++ R+R + +E ++ + R +R++ R +
Sbjct: 780 DERKRQEEIRLKEEREREERRRAEEERRRKEEERREEERKREREEEERRRHRAQEAAMRD 839
Query: 961 ENESRHKRHRRDNRNGSRKNGDHED 985
E + R + R+ + ED
Sbjct: 840 AEERKRIEEERKRKEEERRKQEEED 864
Score = 64 (27.6 bits), Expect = 0.00072, Sum P(3) = 0.00072
Identities = 17/82 (20%), Positives = 37/82 (45%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPR 952
K+ + + AE + +R ++ ++ RKR + +E E+ R + D ++ +
Sbjct: 791 KEEREREERRRAEEERRRKEEERREEERKRER------EEEERRRHRAQEAAMRDAEERK 844
Query: 953 RLASTPESENESRHKRHRRDNR 974
R+ + + E R K+ D R
Sbjct: 845 RIEEERKRKEEERRKQEEEDRR 866
Score = 40 (19.1 bits), Expect = 0.00019, Sum P(3) = 0.00019
Identities = 8/13 (61%), Positives = 10/13 (76%)
Query: 77 LPNAQPSNHIPPS 89
LP A PS+ +PPS
Sbjct: 313 LPLALPSDLVPPS 325
>UNIPROTKB|E2QUP1 [details] [associations]
symbol:NSRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032502 "developmental process" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IEA] [GO:0003729 "mRNA binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] GO:GO:0016607 GO:GO:0003729
GO:GO:0006913 GO:GO:0030529 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 CTD:84081 KO:K13206 InterPro:IPR018612
Pfam:PF09745 OMA:NDKYRDR EMBL:AAEX03006683 RefSeq:XP_868363.2
Ensembl:ENSCAFT00000030135 GeneID:610752 KEGG:cfa:610752
NextBio:20896301 Uniprot:E2QUP1
Length = 553
Score = 101 (40.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 890 HSKKDGADSD-HDDSAENDSKRSGKDN-DKKHRKRHQSAHDSLDENEKDRSKNPHRHNSD 947
H +D D H E++ K G+D ++K R + + SL E E+DR +N H +S+
Sbjct: 342 HRHRDAGHRDSHWKRHEHEDKLRGRDQRERKDRDWKREKY-SLREQERDRQRNEHDRHSE 400
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLE-DGEYGGESR 996
+ + + +S+ + H + R++ S K D E E + + G +R
Sbjct: 401 KGEEKE----EKSKEKEEHMKARKERHENSDKYRDREQQEINVQSSGRNR 446
Score = 74 (31.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 37/147 (25%), Positives = 72/147 (48%)
Query: 490 KTAFNEYLGQK--KKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDER 547
+T+ +E L ++ KKQ ++ +L+++KA + E+S + + + + +E
Sbjct: 38 ETSVSESLQREAAKKQAMKQTKLEIQKA------LAEDSTVYEYDSIYDEMQK--KREEN 89
Query: 548 FKALERERDRKDMFDDHLDELKQKE-RAKAQEERKRNIIEYRKFLESCDF-----IKANT 601
L +DRK + +L LK E R K QE+R I+ + +E +F +
Sbjct: 90 NPKLLLGKDRKPKYIHNL--LKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSA 147
Query: 602 QWRKVQDRLEADERCSRLDKMD-RLEI 627
+K+Q+R E +ER R ++ RL++
Sbjct: 148 YKKKLQERAEEEEREKRAAALEARLDV 174
Score = 69 (29.3 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 26/99 (26%), Positives = 50/99 (50%)
Query: 485 TLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEN 544
T+ E + ++E QKK+++ + L K + Y L ++VE+ + + M +
Sbjct: 71 TVYEYDSIYDEM--QKKREENNPKLLLGKDRKPKYIHNLLKAVEIRKKEQEKR---MEKK 125
Query: 545 DERFKALER-ERDRKDMFDDHLDELKQKERAKAQEERKR 582
+R + +E+ E D K+ F + K +ERA+ +E KR
Sbjct: 126 IQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEEREKR 164
>UNIPROTKB|Q5ZI03 [details] [associations]
symbol:CIR1 "Corepressor interacting with RBPJ 1"
species:9031 "Gallus gallus" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] GO:GO:0006355
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0006351
EMBL:AJ720981 IPI:IPI00587695 RefSeq:NP_001026557.1
UniGene:Gga.22511 STRING:Q5ZI03 GeneID:426529 KEGG:gga:426529
CTD:9541 eggNOG:NOG296918 HOGENOM:HOG000232062 InParanoid:Q5ZI03
KO:K06066 OrthoDB:EOG4F4SBT NextBio:20828071 InterPro:IPR019339
Pfam:PF10197 SMART:SM01083 Uniprot:Q5ZI03
Length = 460
Score = 98 (39.6 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 32/109 (29%), Positives = 56/109 (51%)
Query: 901 DDSAENDSKRSGKDNDKKHRKRHQ-----SAHDSLDEN-EKDRSKNPHRHNSDRKKPRRL 954
D SAEN SKRS + ++K + R+Q DS ++ ++ R ++P +S R++ +
Sbjct: 340 DSSAEN-SKRSSCEGERKSKSRYQRETERKERDSRSQSADERRGRSPCTSHSSRRQRQTR 398
Query: 955 ASTPESENESRHKRH--RRDNRNGSRKN-----GDHEDLEDGEYGGESR 996
S +S E RH+++ R + +G RK G+ + + EY SR
Sbjct: 399 KSPSQSPGEERHRKNETRSPSTDGHRKEKKYREGNGDRCSNVEYRERSR 447
Score = 75 (31.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 22/88 (25%), Positives = 42/88 (47%)
Query: 499 QKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRK 558
+KKK+D ++++ + KK + +KK + S +SS+ S + + E D R KA +++ K
Sbjct: 232 KKKKKDRKKKKQQKKKGKSKHKKH-KMSSSSSSSSETSGSSSDSETDSRDKAAQKKMYSK 290
Query: 559 DMFDDHLDELKQKERAKAQEERKRNIIE 586
E + + RK + E
Sbjct: 291 KRKKGKFSEASSSDSEGKAKTRKEKLYE 318
>UNIPROTKB|G4NEH6 [details] [associations]
symbol:MGG_00102 "Cell cycle control protein cwf19"
species:242507 "Magnaporthe oryzae 70-15" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005681 "spliceosomal
complex" evidence=ISS] InterPro:IPR011146 GO:GO:0003824
EMBL:CM001235 GO:GO:0005681 SUPFAM:SSF54197 GO:GO:0000398
InterPro:IPR006768 InterPro:IPR006767 Pfam:PF04677 Pfam:PF04676
RefSeq:XP_003719037.1 EnsemblFungi:MGG_00102T0 GeneID:2674386
KEGG:mgr:MGG_00102 Uniprot:G4NEH6
Length = 728
Score = 128 (50.1 bits), Expect = 0.00022, P = 0.00022
Identities = 36/102 (35%), Positives = 54/102 (52%)
Query: 890 HSKKD-GADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR 948
H ++D +D D D R D+D+ HR +H+ HDS E E+DR ++ HRH
Sbjct: 34 HHRRDRSSDRTGDRERHRDHDR---DSDR-HRHKHRR-HDSR-ERERDRDEHGHRH---- 83
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
K+ R+ + + +S +RHR N + SR+NG E E GE
Sbjct: 84 KRSRKDEDENDRDKDSSRRRHRHRNGSPSRRNG-REVNESGE 124
>DICTYBASE|DDB_G0292242 [details] [associations]
symbol:taf1 "transcription initiation factor TFIID
subunit 1" species:44689 "Dictyostelium discoideum" [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0016573 "histone acetylation"
evidence=ISS] [GO:0005669 "transcription factor TFIID complex"
evidence=ISS] [GO:0004402 "histone acetyltransferase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001487 Pfam:PF00439 PROSITE:PS50014 SMART:SM00297
dictyBase:DDB_G0292242 GenomeReviews:CM000155_GR GO:GO:0045944
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 eggNOG:COG5076
InterPro:IPR018359 GO:GO:0004402 EMBL:AAFI02000188 GO:GO:0005669
HSSP:Q92830 KO:K03125 InterPro:IPR022591 Pfam:PF12157
RefSeq:XP_629749.1 ProteinModelPortal:Q54DH8 STRING:Q54DH8
PRIDE:Q54DH8 EnsemblProtists:DDB0220687 GeneID:8628578
KEGG:ddi:DDB_G0292242 InParanoid:Q54DH8 OMA:EHRSSEH Uniprot:Q54DH8
Length = 2310
Score = 122 (48.0 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 32/108 (29%), Positives = 49/108 (45%)
Query: 890 HSKKDGADSDHDDSAENDSK-RSGKDNDKKHRKRHQSA-HDSLDENEK--DRSKNPHRHN 945
H + S+H S S+ RS + +H H+S+ H S D + DR HR +
Sbjct: 1742 HRSGEHRSSEHRSSEHRGSEHRSSEHRSGEHSSHHRSSEHRSGDREHRSSDRGDREHRSS 1801
Query: 946 SDRKKPRRLASTPESENESRHKRHR--RDNRNGSRKNGDHEDLEDGEY 991
R R + SE+ S K HR R++R+ ++GD E D E+
Sbjct: 1802 EHRSSEHRSSEHRSSEHRSGDKEHRSDREHRSSEHRSGDREHRSDREH 1849
Score = 72 (30.4 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 32/137 (23%), Positives = 67/137 (48%)
Query: 464 DWT----WDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDY 519
DW WD+++ + + L +R+ F E++ +K+ + E ++A
Sbjct: 715 DWIDNIIWDESMVPEKIQQVSMLILDLNDREMYFEEHIEKKEHNNGESGSNGDQQA--PV 772
Query: 520 KKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDM-FDDHLDELKQKERAKAQE 578
KK ++ + L ++ ++A + ER +A R + + M F++ L + K+++ K +E
Sbjct: 773 KKKSKKKLALEAAQA-AQAAAL----ERAQAAARAANGQTMSFEEQLQKDKEEDERKERE 827
Query: 579 ERKRNIIEYRKFLESCD 595
ER+++ E KF S D
Sbjct: 828 EREQSQREIDKFNLSND 844
Score = 41 (19.5 bits), Expect = 0.00028, Sum P(3) = 0.00028
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 284 TQSETSPNSQTSISFPSSVVKAPSSAD 310
+ S++S +S +SIS SS+ + S +D
Sbjct: 224 SMSDSSRSSGSSISSRSSISSSSSRSD 250
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 274 EQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA 309
E+ E+ K T+SE + S + S A SSA
Sbjct: 170 EEEEQQQQKSTRSEDEDDDDISSASSLSSSSASSSA 205
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(3) = 0.00055
Identities = 15/69 (21%), Positives = 33/69 (47%)
Query: 371 IDVSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDAL 430
I + AVTD+ + KN L D+ ++++ E + +A +K+++A
Sbjct: 57 IGIDEDDKNAVTDSVIVPDKNALDY---EDIDEVAEEIQSTENEINKLNA---DKLANAA 110
Query: 431 EEKTVEQEH 439
+ ++Q+H
Sbjct: 111 IAR-LQQQH 118
>UNIPROTKB|E2R749 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GeneTree:ENSGT00700000104035
EMBL:AAEX03001478 Ensembl:ENSCAFT00000012107 Uniprot:E2R749
Length = 510
Score = 114 (45.2 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 891 SKKDGADSDHDDSAENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKN-PHRHNSDR 948
+K + D D E D +R K++DK+ K + D E +KDRSK + D+
Sbjct: 302 NKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERDKDRSKEIDEKRKKDK 361
Query: 949 KK---PRRLASTPESENESRHKRHRRDNRNGSR 978
K PR ++ S + SR +R RR +R+ SR
Sbjct: 362 KSRTPPRSYNASRRSRSSSRERRRRR-SRSSSR 393
Score = 86 (35.3 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 908 SKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHR-HNSDRKKPRRLASTPESENESRH 966
S RS + + RK +S N+KD+ + R H S+R++ R +ST +S N+ R
Sbjct: 391 SSRSPRTSKTIKRKSSRSPSPR-SRNKKDKKREKERDHISERRERERSSSTRKSSND-RD 448
Query: 967 KRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
+ + + N S K +H D G E
Sbjct: 449 GKEKLEKNNTSLKEKEHSKEPDLSVGKE 476
Score = 80 (33.2 bits), Expect = 0.00044, Sum P(3) = 0.00044
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 484 RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFE 543
R+ +RK E + +K++ ++R + +K RD K E E K
Sbjct: 256 RSRDKRKDT-REKIKEKERVKEKDREKEREKERDREK---EREKEKERGKNKDKEREKDR 311
Query: 544 NDERFKALERERDRKDMFDDHLDELKQKERAKAQE---ERKRNIIEYRK 589
+ ++ K ERERD++ D D+ K+KE+ K +E +R + I E RK
Sbjct: 312 DKDKEKDRERERDKEH--DKERDKEKEKEQDKEKERDKDRSKEIDEKRK 358
Score = 52 (23.4 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 21/128 (16%), Positives = 56/128 (43%)
Query: 495 EYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERE 554
E Q ++ EE ++++A+ +E ++ + ++ + + R +
Sbjct: 149 EMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHS 208
Query: 555 RDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE 614
R RK H + R++ Q++R+R+ ++K +S + K+ ++ R R + E
Sbjct: 209 R-RKRSQSKHRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTRE 266
Query: 615 RCSRLDKM 622
+ +++
Sbjct: 267 KIKEKERV 274
Score = 47 (21.6 bits), Expect = 0.00029, Sum P(3) = 0.00029
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 14 QVPHQPPMVGSMDPPR 29
++P QPP++G++DP +
Sbjct: 46 EIP-QPPLMGNVDPSK 60
>UNIPROTKB|J9JHP7 [details] [associations]
symbol:LOC100855889 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR012677 GO:GO:0000166 Gene3D:3.30.70.330
KO:K13169 OMA:QKDREVR GeneTree:ENSGT00440000039314
EMBL:AAEX03026095 RefSeq:XP_003640281.1 RefSeq:XP_003640333.1
Ensembl:ENSCAFT00000044031 Ensembl:ENSCAFT00000045953
GeneID:100855889 GeneID:100856264 KEGG:cfa:100855889
KEGG:cfa:100856264 Uniprot:J9JHP7
Length = 699
Score = 94 (38.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 34/119 (28%), Positives = 50/119 (42%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDN-DKKHRKRHQSAHDSLDENEKDRSKNPHRHNS--D 947
S++D + + S S G+D+ K+ R R + A D + + + H+ +S D
Sbjct: 574 SEQDKCNREPSGSRGRSSGGRGEDDRHKRERSRPRRAGSREDGRQPRKERRQHKKHSRQD 633
Query: 948 RKKPRRLASTPESENESRHKRHR-------RDNRNGS-RKNGDHE--DLEDGEYGGESR 996
PRR AS + + H R R RD R GS RK H D + G SR
Sbjct: 634 DSPPRRSASPDHNRSRRSHSRERSSRRERSRDRRGGSGRKRSRHRRSDRDRSRSGSPSR 692
Score = 82 (33.9 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 27/123 (21%), Positives = 65/123 (52%)
Query: 501 KKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDM 560
K +D + +K + D K + + S++ R K + + E K E+E + +
Sbjct: 242 KGEDGKAVACNIKVSFDSTKHLSDASIKKRQLER-QKLQELEQQREEQKRREKEAEERQR 300
Query: 561 FDDH----LDEL----KQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEA 612
++ L+EL K++E+ + +E+++R+ E+R+ + + ++A Q +K+Q++++
Sbjct: 301 AEERKQKELEELERERKREEKLRKREQKQRDR-EFRRNQKKLEKLQAEEQ-KKLQEKIKL 358
Query: 613 DER 615
+ER
Sbjct: 359 EER 361
Score = 79 (32.9 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 35/142 (24%), Positives = 77/142 (54%)
Query: 501 KKQDAEERRLK-LKKARDDYKKMLEESVELT-SSTRWSKAVTMFEND----ERFKALE-R 553
KK+ E ++L+ L++ R++ K+ +E+ E + R K + E + E+ + E +
Sbjct: 269 KKRQLERQKLQELEQQREEQKRREKEAEERQRAEERKQKELEELERERKREEKLRKREQK 328
Query: 554 ERDRKDMFDDH-LDELKQKERAKAQEERK---RNIIEYRKFLESCDFIK---ANTQWRKV 606
+RDR+ + L++L+ +E+ K QE+ K R ++ ++ L+S I + + K+
Sbjct: 329 QRDREFRRNQKKLEKLQAEEQKKLQEKIKLEERKLLLAQRNLQSIRLIAELLSRAKAMKL 388
Query: 607 QDRLEADE--RCSRLDKMDRLE 626
Q++ + +E R +L++ RL+
Sbjct: 389 QEQEQKEETLRLQQLEERRRLQ 410
>UNIPROTKB|F1PR59 [details] [associations]
symbol:ARHGAP12 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0007165 "signal transduction"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005543
"phospholipid binding" evidence=IEA] Pfam:PF00018 Pfam:PF00169
InterPro:IPR000198 InterPro:IPR001202 InterPro:IPR001452
InterPro:IPR001849 InterPro:IPR008936 Pfam:PF00397 Pfam:PF00620
PROSITE:PS50002 PROSITE:PS50003 PROSITE:PS50020 PROSITE:PS50238
SMART:SM00233 SMART:SM00324 SMART:SM00326 SMART:SM00456
GO:GO:0007165 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 SUPFAM:SSF50044
GeneTree:ENSGT00700000104029 Gene3D:2.20.70.10 SUPFAM:SSF51045
InterPro:IPR015767 PANTHER:PTHR23181 CTD:94134 EMBL:AAEX03001219
RefSeq:XP_859716.1 Ensembl:ENSCAFT00000006499 GeneID:487088
KEGG:cfa:487088 Uniprot:F1PR59
Length = 791
Score = 134 (52.2 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 26/87 (29%), Positives = 45/87 (51%)
Query: 196 VQTDWKEHTSADGRRYYFNKRTRVSTWDKP-FELMTTIERADAST----DWKEFTSPDGR 250
+ +W+ H + GR YY+N+ T+ TW P + T I + D + +W + GR
Sbjct: 264 INGEWETHKDSSGRCYYYNRGTQERTWKPPRWTRDTNISKGDFQSPGDQEWLKHVDDQGR 323
Query: 251 KYYYNKVTKQSKWSLPDELKLAREQAE 277
+YYY+ +S+W LP +++Q E
Sbjct: 324 QYYYSADGSRSEWELPKYNASSQQQRE 350
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/48 (25%), Positives = 20/48 (41%)
Query: 928 DSLDENEKDRSKNPHRHNS--DRKKPRRLASTPESENESRHKRHRRDN 973
D E E S +H+ D K P++L S +S ++ + N
Sbjct: 527 DEAIEEEIPESPGIEKHDKEKDHKDPKKLRPMKVSSIDSSEQKKTKKN 574
Score = 39 (18.8 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 17/60 (28%), Positives = 29/60 (48%)
Query: 693 YMAVASNTSGSTPKDLFEDVVEELQKQ---FQEDKTRI-KDAVKLRKITLSSTWTFEDFK 748
+ V S+T + + E + EE+ + + DK + KD KLR + +SS + E K
Sbjct: 511 WFKVLSSTINNQTVETDEAIEEEIPESPGIEKHDKEKDHKDPKKLRPMKVSSIDSSEQKK 570
>UNIPROTKB|Q6PD62 [details] [associations]
symbol:CTR9 "RNA polymerase-associated protein CTR9
homolog" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0016593
"Cdc73/Paf1 complex" evidence=IDA] [GO:0010390 "histone
monoubiquitination" evidence=IDA] [GO:0033523 "histone H2B
ubiquitination" evidence=IDA] [GO:0007259 "JAK-STAT cascade"
evidence=ISS] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=ISS] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISS] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IDA]
[GO:0019827 "stem cell maintenance" evidence=IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0035327 "transcriptionally active
chromatin" evidence=ISS] [GO:0001711 "endodermal cell fate
commitment" evidence=ISS] [GO:0051571 "positive regulation of
histone H3-K4 methylation" evidence=IMP] [GO:2001162 "positive
regulation of histone H3-K79 methylation" evidence=IMP] [GO:0080182
"histone H3-K4 trimethylation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001440 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 EMBL:CH471064 GO:GO:0016055
GO:GO:0016607 GO:GO:0045944 GO:GO:0006351 GO:GO:0071222
GO:GO:0000122 eggNOG:COG0457 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 GO:GO:0019827 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0033523 GO:GO:0010390 GO:GO:0080182
GO:GO:0007259 GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 EMBL:D63875
EMBL:BC058914 IPI:IPI00477468 RefSeq:NP_055448.1 UniGene:Hs.725151
ProteinModelPortal:Q6PD62 SMR:Q6PD62 DIP:DIP-31693N IntAct:Q6PD62
MINT:MINT-1182366 STRING:Q6PD62 PhosphoSite:Q6PD62 DMDM:74758318
PaxDb:Q6PD62 PRIDE:Q6PD62 Ensembl:ENST00000361367 GeneID:9646
KEGG:hsa:9646 UCSC:uc001mja.3 CTD:9646 GeneCards:GC11P010772
HGNC:HGNC:16850 MIM:609366 neXtProt:NX_Q6PD62 PharmGKB:PA134896774
HOGENOM:HOG000246926 HOVERGEN:HBG081372 InParanoid:Q6PD62 KO:K15176
OMA:TQNDTYS OrthoDB:EOG4NKBTV ChiTaRS:CTR9 GenomeRNAi:9646
NextBio:36207 PMAP-CutDB:Q6PD62 Bgee:Q6PD62 CleanEx:HS_CTR9
Genevestigator:Q6PD62 GermOnline:ENSG00000198730 GO:GO:0070102
GO:GO:2001162 Uniprot:Q6PD62
Length = 1173
Score = 91 (37.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 49/170 (28%), Positives = 80/170 (47%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F L + A SD QA + R+
Sbjct: 777 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLL-SQAQYHVARARKQD 835
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 836 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 889
Query: 541 MFEND-ERFKALER-----ERDRK----DMF--DDHLDEL---KQKERAK 575
MF + E K +R R +K D F DD D+L K+K+R K
Sbjct: 890 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKRRK 939
Score = 89 (36.4 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 29/100 (29%), Positives = 44/100 (44%)
Query: 898 SDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH-RHNSDRKKPRRLAS 956
S DS EN +K SG + R R Q + D ++ R + P SD + + S
Sbjct: 1054 SSESDSDENQNK-SGSEAGSPRRPRRQRSDQDSDSDQPSRKRRPSGSEQSDNESVQSGRS 1112
Query: 957 -TPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+ SEN+SR ++ + S + D+E G G ES
Sbjct: 1113 HSGVSENDSRPASPSAESDHESERGSDNEGSGQGS-GNES 1151
Score = 87 (35.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 34/111 (30%), Positives = 56/111 (50%)
Query: 891 SKKDGADSDH----DDS-AENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHN 945
S D +D D D+ N + S D D++ +K S DS DEN+ +K+
Sbjct: 1016 SSDDSSDEDKLKIADEGHPRNSNSNSDSDEDEQRKKCASSESDS-DENQ---NKSGSEAG 1071
Query: 946 SDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE-YGGES 995
S R+ PRR S +S+++ + R RR + GS ++ D+E ++ G + G S
Sbjct: 1072 SPRR-PRRQRSDQDSDSD-QPSRKRRPS--GSEQS-DNESVQSGRSHSGVS 1117
>UNIPROTKB|E1BSS3 [details] [associations]
symbol:EIF3A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001732 "formation of translation initiation complex"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005730
GO:GO:0003743 GO:GO:0005852 OMA:QDRDEND
GeneTree:ENSGT00690000102108 GO:GO:0001732 EMBL:AADN02030976
EMBL:AADN02030975 IPI:IPI00594883 Ensembl:ENSGALT00000015192
Uniprot:E1BSS3
Length = 1365
Score = 113 (44.8 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 43/157 (27%), Positives = 79/157 (50%)
Query: 471 LRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKL---KKARDDYKKML--EE 525
L ++ DR R R+T + + L Q +++ AEERR +L KK R + +++ E
Sbjct: 750 LSRMLEDRDLFEARLKALRRTVYEDKLKQFQERLAEERRNRLEERKKQRKEERRITYYRE 809
Query: 526 SVELTSSTRWSKAVTMFENDERFKALERERDRKDMFD--DHLDELKQKERAKAQE--ERK 581
E R + + E ER + +RE+++++ + L+EL++K+R + E ER+
Sbjct: 810 KEEEEQRLREEQLLKEREEKERIEREKREQEQREYQERVKKLEELEKKKRQREMEIEERE 869
Query: 582 RNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSR 618
R E R+ L+ F + ++W DR E++ R
Sbjct: 870 RRREEERRGLDD-PFSRKESRWG---DRGESESSWRR 902
Score = 60 (26.2 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 22/93 (23%), Positives = 34/93 (36%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
++ A D D D+ +K R +S+ D E D + P R D +P
Sbjct: 920 RRGEARDDERPFRRGDDLPRRSDDQEKERPSVESSEDRPPRREGDEDRPPRREG-DEDRP 978
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHE 984
R +E R R D+ GS + D +
Sbjct: 979 LR-----RGLDEDRPPRRGLDDDRGSWRAADDD 1006
Score = 59 (25.8 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 26/88 (29%), Positives = 32/88 (36%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRK----RHQSAHDSLDENEKDRSKNPHRHN--SDRKK 950
D D DD S +GK +D R+ S DS E DR R DR+
Sbjct: 1213 DFDRDDRFRRPSL-NGKRDDAGWRRGPAEETSSWRDSSRREEWDRGGRDMRDRRADDREP 1271
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSR 978
P R S+ E R D+R R
Sbjct: 1272 PLRRGPPLRSDREEPSSWRRADDRREER 1299
Score = 54 (24.1 bits), Expect = 0.00037, Sum P(3) = 0.00037
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>UNIPROTKB|F1MMZ9 [details] [associations]
symbol:CCAR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006915 "apoptotic process" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR003034
InterPro:IPR025224 Pfam:PF02037 PROSITE:PS50800 SMART:SM00513
GO:GO:0006915 GO:GO:0003676 Gene3D:1.10.720.30 PANTHER:PTHR14304
GeneTree:ENSGT00530000063672 EMBL:DAAA02061824 EMBL:DAAA02061825
EMBL:DAAA02061826 EMBL:DAAA02061827 IPI:IPI00782893
Ensembl:ENSBTAT00000053074 OMA:ANEETIP Uniprot:F1MMZ9
Length = 538
Score = 97 (39.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/83 (24%), Positives = 38/83 (45%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK+ D D D + ++SG D DKK + + D ++ KD + +N D P
Sbjct: 203 KKEERD-DETDEPKPKRRKSGDDKDKKEDRDERKKEDKRKDDSKDDDETEEDNNQDEYDP 261
Query: 952 RRLASTPESENESRHKRHRRDNR 974
+ E++ + ++RD++
Sbjct: 262 MEAEEAEDEEDDRDEEENKRDDK 284
Score = 75 (31.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 27/101 (26%), Positives = 43/101 (42%)
Query: 506 EERRLKLKKARDDYKKMLEESVELTSS--TRWSKAVTMFENDERFKALERERDRKDMFDD 563
+ + +K+ R + + S L S R +K + + E E K LE+ ++ DD
Sbjct: 24 DPKTMKVNDLRKELESRALSSKGLKSQLIARLTKQLKVEEQKEEQKELEKSEKEEEEEDD 83
Query: 564 HLDEL-KQKERAKAQEERKRNIIEYRKFLESCDFIKANTQW 603
E K++E K QEE +R E R L I + W
Sbjct: 84 RKSEDDKEEEERKRQEELERQRRERRYILPDEPAIVVHPNW 124
Score = 74 (31.1 bits), Expect = 0.00048, Sum P(2) = 0.00047
Identities = 31/107 (28%), Positives = 52/107 (48%)
Query: 516 RDDYKKMLEESVELTSSTRWSKA--VTMFENDERFKALE-RERDRKDMFDDHLDELKQKE 572
+D+ +K E+ E+++ T WSK TM ND R K LE R K + + L ++
Sbjct: 1 QDEEEKDDGEAKEISTPTHWSKLDPKTMKVNDLR-KELESRALSSKGLKSQLIARLTKQL 59
Query: 573 RAKAQEERKRNIIEYRKFLESCDFIKANT----QWRKVQDRLEADER 615
+ + Q+E ++ + + K E D K+ + RK Q+ LE R
Sbjct: 60 KVEEQKEEQKELEKSEKEEEEEDDRKSEDDKEEEERKRQEELERQRR 106
>DICTYBASE|DDB_G0293562 [details] [associations]
symbol:DDB_G0293562 species:44689 "Dictyostelium
discoideum" [GO:0044351 "macropinocytosis" evidence=RCA]
dictyBase:DDB_G0293562 EMBL:AAFI02000218 eggNOG:NOG253936
InterPro:IPR014898 Pfam:PF08790 RefSeq:XP_629009.1
ProteinModelPortal:Q54BM0 EnsemblProtists:DDB0192009 GeneID:8629293
KEGG:ddi:DDB_G0293562 InParanoid:Q54BM0 OMA:ECASTVI
ProtClustDB:CLSZ2846558 Uniprot:Q54BM0
Length = 527
Score = 105 (42.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 29/99 (29%), Positives = 50/99 (50%)
Query: 891 SKKDGADSDHDDSAENDSKR----SGKDNDKKHRKRHQSAHDSLDENEK---DRSKNPHR 943
SKK+ DSD D+S+E++ K+ S +++ + +K + S DE +K D S +
Sbjct: 407 SKKE--DSDSDESSEDEKKKEESSSSSESEDEKKKEDSDSESSEDEKKKEDSDSSSSSES 464
Query: 944 HNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGD 982
+ D+KK +S ESE ES ++ + S + D
Sbjct: 465 EDEDKKKKDSSSSESESEKESDSSSSSSESDSSSSSDSD 503
Score = 66 (28.3 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 47/268 (17%), Positives = 114/268 (42%)
Query: 499 QKKKQD---AEERRLKLKKARDD-YKKMLEESVELTSSTRWSKAVTMFENDERFKALERE 554
+KKK+D E ++++ KK + EES + SS S + DE+ ++
Sbjct: 168 EKKKKDNKKVETKKVETKKVETKKVETKKEESSDSDSSDSDSSSSESESEDEK-----KK 222
Query: 555 RDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE 614
+D K + + + +++++E K N K ES D ++++ + +D E +
Sbjct: 223 KDTKKVEIKKEESESESSESESEDENKDNKKVGTKKEESSDSDSSSSE-SESED--EKKK 279
Query: 615 RCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADVALGTL 674
+ ++ + + E S+ E+K +D + + + + +
Sbjct: 280 KNNKKVEAKKEESSDSESESESESSSSSSSSSSESESEDEKKKKDSKKVETKKEGSSDSE 339
Query: 675 TAKTNWRDYCIKVKDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQEDKTRIKDAVKLR 734
++ + D + ++ +S++ S+P + EE + ++++T+ +++
Sbjct: 340 SSSESVEDEKMDIEKVEIKKEESSDSESSSPAS--SESKEEEKMDIEKEETKKEES---- 393
Query: 735 KITLSSTWTFEDFKASVLEDATSPPISD 762
+ SS+ + E+ K S ED+ S S+
Sbjct: 394 --SSSSSESEEEQKKSKKEDSDSDESSE 419
>ZFIN|ZDB-GENE-040801-225 [details] [associations]
symbol:prpf38a "PRP38 pre-mRNA processing factor 38
(yeast) domain containing A" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] Pfam:PF03371 ZFIN:ZDB-GENE-040801-225 GO:GO:0008380
GO:GO:0006397 GO:GO:0005681 GeneTree:ENSGT00700000104035 CTD:84950
eggNOG:NOG241318 HOGENOM:HOG000173665 HOVERGEN:HBG104959 KO:K12849
OMA:YMRLTGS OrthoDB:EOG4NP74H InterPro:IPR005037 PANTHER:PTHR23142
EMBL:BC075873 EMBL:BC152173 IPI:IPI00505995 RefSeq:NP_001003483.1
UniGene:Dr.34097 Ensembl:ENSDART00000057290 GeneID:445089
KEGG:dre:445089 InParanoid:Q6DHU4 NextBio:20831852 Bgee:Q6DHU4
Uniprot:Q6DHU4
Length = 313
Score = 108 (43.1 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 908 SKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHK 967
S R +D D+ HR + H S + RSK+P H S R + + +PES ++ HK
Sbjct: 250 SPRRERDRDR-HRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSH--SKSPESRSKKSHK 306
Query: 968 RHRRDN 973
R RR N
Sbjct: 307 RSRRGN 312
Score = 56 (24.8 bits), Expect = 0.00042, Sum P(2) = 0.00042
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 545 DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRN 583
D R ALE + D + ++ DE ++ ER ++ E +R+
Sbjct: 178 DPRISALEEDLDEVETSEEEDDEDEKPERMQSPEPHRRS 216
>UNIPROTKB|C9JD58 [details] [associations]
symbol:WAC "WW domain-containing adapter protein with
coiled-coil" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 GO:GO:0005681
Gene3D:2.20.70.10 SUPFAM:SSF51045 EMBL:AL161936 EMBL:AL358234
HGNC:HGNC:17327 ChiTaRS:WAC IPI:IPI00924579
ProteinModelPortal:C9JD58 SMR:C9JD58 STRING:C9JD58
Ensembl:ENST00000420266 HOGENOM:HOG000169503 ArrayExpress:C9JD58
Bgee:C9JD58 Uniprot:C9JD58
Length = 204
Score = 115 (45.5 bits), Expect = 0.00046, P = 0.00046
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKY 252
DW EH S+ G++YY+N RT VS W+KP E + +R + + P R Y
Sbjct: 89 DWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDRDY 142
>DICTYBASE|DDB_G0284459 [details] [associations]
symbol:DDB_G0284459 species:44689 "Dictyostelium
discoideum" [GO:0005615 "extracellular space" evidence=IDA]
dictyBase:DDB_G0284459 GO:GO:0005615 EMBL:AAFI02000064
RefSeq:XP_638628.1 EnsemblProtists:DDB0218605 GeneID:8624599
KEGG:ddi:DDB_G0284459 eggNOG:NOG294086 OMA:ISERDEY Uniprot:Q54PM6
Length = 1224
Score = 99 (39.9 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 26/108 (24%), Positives = 48/108 (44%)
Query: 891 SKKDGADSDHDDSAENDSKRS-GKDNDK-KHRKRHQS-AHDSLDENEKDRSKNPHRHNSD 947
S +D D D D + D R G D D+ + R R + D + ++DR + +NS+
Sbjct: 841 SDRD-RDRDRDRDRDRDRDRDRGNDRDRDRDRDRDRDRGRDRGSDRDRDRKDSNSNNNSN 899
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+ + N + + +++DN N + N ++ + DG G S
Sbjct: 900 NNNNN---NNNNNNNNNNNNNNKKDNNNNNNNNNNNNNKRDGNKDGSS 944
Score = 78 (32.5 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 32/120 (26%), Positives = 51/120 (42%)
Query: 476 NDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEE-----SVELT 530
+D+ +T KT +E + +K D E+ KL+K KK E+ VE
Sbjct: 478 SDKSEKTEKTEKAEKTEKSEKSEKSEKTDQLEKAEKLEKEEKTEKKKTEKVEKAGKVEKK 537
Query: 531 SSTRWSKAVTMFEND-ERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRK 589
+ + E + E+ K E+E+++KD DEL+ E K + KR I K
Sbjct: 538 EKPKDKQTKQEKEKEKEKEKETEKEKEKKDKVSSKKDELQPIEEDKKKIGGKRKSINSSK 597
Score = 48 (22.0 bits), Expect = 0.00046, Sum P(3) = 0.00046
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 274 EQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSA 309
E K++ T S +SP Q ++S P+ AP+SA
Sbjct: 195 ELQNKSTPSKTSSASSP-PQNTLSAPAPPAPAPTSA 229
>UNIPROTKB|F1LRG1 [details] [associations]
symbol:Eif3a "Eukaryotic translation initiation factor 3
subunit A" species:10116 "Rattus norvegicus" [GO:0001732 "formation
of translation initiation complex" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005852 "eukaryotic translation
initiation factor 3 complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 RGD:1307269 GO:GO:0003743
IPI:IPI00949850 Ensembl:ENSRNOT00000013559 ArrayExpress:F1LRG1
Uniprot:F1LRG1
Length = 1344
Score = 99 (39.9 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 51/209 (24%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E V W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRVKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERKITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 73 (30.8 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSA--HDSLDENE--KDRSKNPHRHNSDR 948
+D ++D D + D +R G D+ R R + +E+ +D S+ R DR
Sbjct: 1175 QDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDRDDR 1234
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNG 981
++ R + + R R RRD R+ + G
Sbjct: 1235 RRDR------DDRRDLRDLRDRRDLRDDRDRRG 1261
Score = 61 (26.5 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 892 KKDGADSDHDD--SAEND-SKRSGKDNDKKHRKR--------HQSAHDSLDENEKDRSKN 940
++ GAD + +A++D R G D+D+ R+ +A D + D +
Sbjct: 1049 RRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRNAAEDRISRRGADDDRG 1108
Query: 941 PHRHNSDRKKPRR 953
P R+ D + PRR
Sbjct: 1109 PWRNMDDDRVPRR 1121
Score = 54 (24.1 bits), Expect = 0.00050, Sum P(3) = 0.00050
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(4) = 0.00071
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
P R + PE R K RDN++ + D E D E G+
Sbjct: 1152 PPRESRPPEEREWDRDKEKDRDNQDREENDKDLERDRDRERDGD 1195
>RGD|1307269 [details] [associations]
symbol:Eif3a "eukaryotic translation initiation factor 3,
subunit A" species:10116 "Rattus norvegicus" [GO:0001732 "formation
of translation initiation complex" evidence=ISO;ISS] [GO:0003743
"translation initiation factor activity" evidence=ISO;ISS]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005852
"eukaryotic translation initiation factor 3 complex"
evidence=ISO;ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
RGD:1307269 GO:GO:0005634 GO:GO:0005730 GO:GO:0003743 GO:GO:0005852
HOGENOM:HOG000246822 KO:K03254 HAMAP:MF_03000
GeneTree:ENSGT00690000102108 eggNOG:NOG123880 HOVERGEN:HBG006128
GO:GO:0001732 CTD:8661 OrthoDB:EOG4B2SWM EMBL:CB586480
EMBL:AB259154 IPI:IPI00372810 RefSeq:NP_001040552.2 UniGene:Rn.1644
STRING:Q1JU68 PhosphoSite:Q1JU68 PRIDE:Q1JU68
Ensembl:ENSRNOT00000066947 GeneID:292148 KEGG:rno:292148
InParanoid:Q1JU68 NextBio:633839 ArrayExpress:Q1JU68
Genevestigator:Q1JU68 Uniprot:Q1JU68
Length = 1354
Score = 99 (39.9 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 51/209 (24%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E V W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRVKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERKITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 73 (30.8 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 23/93 (24%), Positives = 40/93 (43%)
Query: 893 KDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSA--HDSLDENE--KDRSKNPHRHNSDR 948
+D ++D D + D +R G D+ R R + +E+ +D S+ R DR
Sbjct: 1185 QDREENDKDLERDRDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSSRRDDRDRDDR 1244
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNG 981
++ R + + R R RRD R+ + G
Sbjct: 1245 RRDR------DDRRDLRDLRDRRDLRDDRDRRG 1271
Score = 61 (26.5 bits), Expect = 0.00073, Sum P(4) = 0.00073
Identities = 19/73 (26%), Positives = 33/73 (45%)
Query: 892 KKDGADSDHDD--SAEND-SKRSGKDNDKKHRKR--------HQSAHDSLDENEKDRSKN 940
++ GAD + +A++D R G D+D+ R+ +A D + D +
Sbjct: 1059 RRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRNAAEDRISRRGADDDRG 1118
Query: 941 PHRHNSDRKKPRR 953
P R+ D + PRR
Sbjct: 1119 PWRNMDDDRVPRR 1131
Score = 54 (24.1 bits), Expect = 0.00051, Sum P(3) = 0.00051
Identities = 28/106 (26%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LKLA E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
Score = 53 (23.7 bits), Expect = 0.00073, Sum P(4) = 0.00073
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
P R + PE R K RDN++ + D E D E G+
Sbjct: 1162 PPRESRPPEEREWDRDKEKDRDNQDREENDKDLERDRDRERDGD 1205
>UNIPROTKB|B7Z6T0 [details] [associations]
symbol:ARHGAP27 "Rho GTPase-activating protein 27"
species:9606 "Homo sapiens" [GO:0005543 "phospholipid binding"
evidence=IEA] Pfam:PF00169 InterPro:IPR001202 InterPro:IPR001849
Pfam:PF00397 PROSITE:PS50003 PROSITE:PS50020 SMART:SM00233
SMART:SM00456 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
Gene3D:2.20.70.10 SUPFAM:SSF51045 eggNOG:NOG279563
InterPro:IPR015767 PANTHER:PTHR23181 EMBL:AC217778 EMBL:AC003070
UniGene:Hs.205326 OrthoDB:EOG4X3H0P EMBL:AK300880 IPI:IPI01011796
SMR:B7Z6T0 STRING:B7Z6T0 Ensembl:ENST00000547264 UCSC:uc010wjl.1
HOVERGEN:HBG106190 Uniprot:B7Z6T0
Length = 399
Score = 121 (47.7 bits), Expect = 0.00051, P = 0.00051
Identities = 32/121 (26%), Positives = 57/121 (47%)
Query: 200 WKEHTSAD-GRRYYFNKRTRVSTWDKPFELM-------TTIERADA----STDWKEFTSP 247
W+ HT A GR YY+N T V+TW+ PFE T+ D+ T+W ++
Sbjct: 52 WETHTDAGTGRPYYYNPDTGVTTWESPFEAAEGAASPATSPASVDSHVSLETEWGQYWDE 111
Query: 248 DGRK-YYYNKVTKQSKWSLPDELKLAREQAEKASIK-GTQSETSPNSQTSISFPSSVVKA 305
+ R+ ++YN +T ++ W E + E + + G+ + P + + +P S+
Sbjct: 112 ESRRVFFYNPLTGETAWEDEAENEPEEELEMQPGLSPGSPGDPRPPTPET-DYPESLTSY 170
Query: 306 P 306
P
Sbjct: 171 P 171
>UNIPROTKB|E1C077 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936 InterPro:IPR006018
Pfam:PF02029 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 IPI:IPI00822280 Ensembl:ENSGALT00000037472
ArrayExpress:E1C077 Uniprot:E1C077
Length = 739
Score = 124 (48.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 70/265 (26%), Positives = 108/265 (40%)
Query: 373 VSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEE 432
V + G + T K+ N D K EE K+ E D E
Sbjct: 129 VETRQGRCEIEETETVTKSYQRNNWRQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVE 188
Query: 433 KTVEQEHFAYANKL--EAKNAFKALLE---SANVGSDWTWDQAL--RAIINDRRYGALRT 485
K+ ++E L A+N A+LE S +D ++A R + L+
Sbjct: 189 KSTDKEEVVETKTLAVNAENDTNAMLEGEQSITDAADKEKEEAEKEREKLEAEEKERLKA 248
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
E+K A + +++K+ AEER ++A+ + +K E E + KA E
Sbjct: 249 EEEKKAAEEKQKAEEEKKAAEER----ERAKAEEEKRAAEERERAKAEEERKAA---EER 301
Query: 546 ERFKALERERDRKDMFDDHLDELKQKERAKAQEERK----RNIIEY-RKFLESCDFIKAN 600
ER KA E + ++ + +ERAKA+EERK R E RK E + KA
Sbjct: 302 ERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAEERAKAEKERKAAEERERAKAE 361
Query: 601 TQWRKVQD--RLEADERCSRLDKMD 623
+ R ++ RLEA E+ KM+
Sbjct: 362 EEKRAAEEKARLEA-EKLKEKKKME 385
Score = 49 (22.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 16/77 (20%), Positives = 30/77 (38%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK +++ E + KR K+ ++ R + E+ K P + S +
Sbjct: 557 KKKQEEAERKIREEEEKKRM-KEEIERRRAEAAEKRQKVPEDGVSEEKKPFKCFSPKGSS 615
Query: 952 RRLASTPESENESRHKR 968
++ E N+S KR
Sbjct: 616 LKIEERAEFLNKSAQKR 632
Score = 49 (22.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 23/100 (23%), Positives = 45/100 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK 950
+KK+ +++ D + KD +K ++ +S D + +++N R + K
Sbjct: 412 AKKESLPEKLQPTSKKDQVKDNKDKEKAPKEEMKSVWDRKRGVPEQKAQNGERELTTPK- 470
Query: 951 PRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGE 990
L ST EN R+ D++N R D E++E+ +
Sbjct: 471 ---LKST---ENAFGRIRNG-DSQNLLRTE-DFEEVEENK 502
Score = 47 (21.6 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLASTPESENESRHKRHRRDNR 974
+K +++ Q A LDE +K R + +KK E E + + + R
Sbjct: 524 EKLKEKQQEAAVELDELKKRREERRKILEEEEQKKKQEEAERKIREEEEKKRMKEEIERR 583
Query: 975 NGSRKNGDHEDLEDG 989
+ EDG
Sbjct: 584 RAEAAEKRQKVPEDG 598
>UNIPROTKB|G3V897 [details] [associations]
symbol:Ctr9 "SH2 domain binding protein 1
(Tetratricopeptide repeat containing), isoform CRA_a" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001711 "endodermal cell fate commitment" evidence=IEA]
[GO:0007259 "JAK-STAT cascade" evidence=IEA] [GO:0010390 "histone
monoubiquitination" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=IEA] [GO:0033523 "histone H2B
ubiquitination" evidence=IEA] [GO:0035327 "transcriptionally active
chromatin" evidence=IEA] [GO:0042169 "SH2 domain binding"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=IEA] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
RGD:1311097 EMBL:CH473956 Gene3D:1.25.40.10 InterPro:IPR013105
Pfam:PF07719 CTD:9646 KO:K15176 OMA:TQNDTYS
GeneTree:ENSGT00390000005097 RefSeq:NP_001094131.1
UniGene:Rn.102000 ProteinModelPortal:G3V897
Ensembl:ENSRNOT00000023741 GeneID:293184 KEGG:rno:293184
NextBio:635518 Uniprot:G3V897
Length = 1173
Score = 93 (37.8 bits), Expect = 0.00058, Sum P(2) = 0.00057
Identities = 45/169 (26%), Positives = 82/169 (48%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFK-ALLES-ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F AL S A SD QA + R+
Sbjct: 777 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLL-SQAQYHVARARKQD 835
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 836 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 889
Query: 541 MFEND-ERFKALER-----ERDRKD-MFDDHLDELKQKERAKAQEERKR 582
MF + E K +R R +K FD+ +++ + +++++KR
Sbjct: 890 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPISKKKKKR 938
Score = 85 (35.0 bits), Expect = 0.00058, Sum P(2) = 0.00057
Identities = 27/114 (23%), Positives = 50/114 (43%)
Query: 891 SKKDGADSDHDDSAENDS-KRSGK-------DNDKKHRKRHQSAHDSLDENEKDRSKNPH 942
S+ D D+ + +E S +RSG+ D+D+ RKR +S + D ++P
Sbjct: 1053 SESDSDDNQNKSGSEAGSPRRSGRQESDEDSDSDQPSRKRRRSGSEQSDNESAQSGRSPS 1112
Query: 943 RHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHE--DLEDGEYGGE 994
+ + R ++ + ES++ES + GS + E + E + G E
Sbjct: 1113 GGSENENDSRPVSPSAESDHESEQGSDNEGSGQGSGNESEPEGSNNEASDRGSE 1166
Score = 84 (34.6 bits), Expect = 0.00073, Sum P(2) = 0.00073
Identities = 25/100 (25%), Positives = 43/100 (43%)
Query: 891 SKKDGADSDHDDSA-ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
S D +D D A E + S D+D R +++ +E D N ++ S+
Sbjct: 1016 SSDDSSDEDKLKIADEGHPRNSNSDSDDDERPNRRAS------SESDSDDNQNKSGSEAG 1069
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
PRR E+ + R+ R+GS ++ D+E + G
Sbjct: 1070 SPRRSGRQESDEDSDSDQPSRKRRRSGSEQS-DNESAQSG 1108
>MGI|MGI:109345 [details] [associations]
symbol:Ctr9 "Ctr9, Paf1/RNA polymerase II complex component,
homolog (S. cerevisiae)" species:10090 "Mus musculus" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0001711 "endodermal cell fate
commitment" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007259 "JAK-STAT cascade" evidence=IMP] [GO:0010390 "histone
monoubiquitination" evidence=ISO] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISO] [GO:0019827 "stem cell maintenance" evidence=ISO;IMP]
[GO:0032968 "positive regulation of transcription elongation from
RNA polymerase II promoter" evidence=ISO] [GO:0033523 "histone H2B
ubiquitination" evidence=ISO] [GO:0035327 "transcriptionally active
chromatin" evidence=IDA] [GO:0042169 "SH2 domain binding"
evidence=IDA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=ISO;IMP] [GO:0070102 "interleukin-6-mediated signaling
pathway" evidence=IMP] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IDA] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISO;IMP] [GO:2001162 "positive regulation
of histone H3-K79 methylation" evidence=ISO] InterPro:IPR001440
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
MGI:MGI:109345 GO:GO:0016055 GO:GO:0016607 GO:GO:0045944
GO:GO:0006351 GO:GO:0071222 GO:GO:0000122 eggNOG:COG0457
Gene3D:1.25.40.10 GO:GO:0042169 InterPro:IPR013105 Pfam:PF07719
GO:GO:0019827 GO:GO:0035327 GO:GO:0051571 GO:GO:0032968
GO:GO:0033523 GO:GO:0010390 GO:GO:0080182 GO:GO:0007259
GO:GO:0016593 GO:GO:0001711 GO:GO:0045638 CTD:9646
HOVERGEN:HBG081372 KO:K15176 OMA:TQNDTYS OrthoDB:EOG4NKBTV
ChiTaRS:CTR9 GO:GO:0070102 GO:GO:2001162 EMBL:L49502 EMBL:AK040205
EMBL:AK040331 EMBL:AK045101 EMBL:AK083921 EMBL:AK134990
EMBL:AK148536 EMBL:BC053910 EMBL:BC080719 EMBL:AB093211
IPI:IPI00120919 IPI:IPI00461860 IPI:IPI00742373 PIR:T42719
RefSeq:NP_033457.2 UniGene:Mm.255858 ProteinModelPortal:Q62018
SMR:Q62018 IntAct:Q62018 STRING:Q62018 PhosphoSite:Q62018
PaxDb:Q62018 PRIDE:Q62018 Ensembl:ENSMUST00000005749 GeneID:22083
KEGG:mmu:22083 UCSC:uc009jfw.1 UCSC:uc009jfx.1
GeneTree:ENSGT00390000005097 InParanoid:Q62018 NextBio:301916
Bgee:Q62018 Genevestigator:Q62018 GermOnline:ENSMUSG00000005609
Uniprot:Q62018
Length = 1173
Score = 92 (37.4 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 51/170 (30%), Positives = 81/170 (47%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFK-ALLES-ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F AL S A SD QA + R+
Sbjct: 777 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAASEARQCSDLL-SQAQYHVARARKQD 835
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 836 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 889
Query: 541 MFEND-ERFKALER-----ERDRK----DMF--DDHLDEL---KQKERAK 575
MF + E K +R R +K D F DD D+L K+K+R K
Sbjct: 890 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDDDLPVSKKKKRRK 939
Score = 86 (35.3 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 25/100 (25%), Positives = 44/100 (44%)
Query: 891 SKKDGADSDHDDSA-ENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
S D +D D A E + S D+D R +++ +E D N ++ S+
Sbjct: 1016 SSDDSSDEDKLKIADEGHPRNSNSDSDDDERPNRRAS------SESDSDDNQNKSGSEAG 1069
Query: 950 KPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDG 989
PRR E+ + R+ R+GS ++ D+E ++ G
Sbjct: 1070 SPRRSGRQESDEDSDSDQPSRKRRRSGSEQS-DNESVQSG 1108
Score = 84 (34.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 30/120 (25%), Positives = 52/120 (43%)
Query: 890 HSKKDGADSDHDD------SAENDS----KRSGKDNDKKHRKRHQSAHDSLDENE----K 935
H + +DSD D+ S+E+DS +SG + R Q + + D ++ +
Sbjct: 1033 HPRNSNSDSDDDERPNRRASSESDSDDNQNKSGSEAGSPRRSGRQESDEDSDSDQPSRKR 1092
Query: 936 DRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
RS + N + R + E+EN+SR ++ + S + D+E G G ES
Sbjct: 1093 RRSGSEQSDNESVQSGRSPSGASENENDSRPASPSAESDHESEQGSDNEGSGQGS-GNES 1151
>FB|FBgn0035253 [details] [associations]
symbol:CG7971 species:7227 "Drosophila melanogaster"
[GO:0008380 "RNA splicing" evidence=ISS] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0071011 "precatalytic spliceosome"
evidence=IDA] EMBL:AE014296 eggNOG:NOG12793 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 KO:K13172 RefSeq:NP_001097475.2
UniGene:Dm.4138 IntAct:A8JNI2 STRING:A8JNI2 PaxDb:A8JNI2
GeneID:38206 KEGG:dme:Dmel_CG7971 UCSC:CG7971-RE
FlyBase:FBgn0035253 OrthoDB:EOG4NK9BZ PhylomeDB:A8JNI2
GenomeRNAi:38206 NextBio:807514 Bgee:A8JNI2 Uniprot:A8JNI2
Length = 1636
Score = 91 (37.1 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 50/230 (21%), Positives = 93/230 (40%)
Query: 390 KNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAK 449
K + + S+SD S++ P +E + D RG K S + +EK +QE+ + E K
Sbjct: 518 KKSRARASSSD----SERTNSPSRKENKSDRSRGAKASKS-DEKAPQQENVMRSRSRERK 572
Query: 450 NAFKALLESANVGSDWTWDQALRAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERR 509
+ + A++ S + A R+ ER + + +D R
Sbjct: 573 DTRSSRPLEASIDSRQRKPRERSAATPPRKEPERHR--ERSKDRQRSKEKHRSRDRLRSR 630
Query: 510 LKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELK 569
+ + + + S E S +++ + ER ++ ER+R R D L+
Sbjct: 631 ERQRSRERQRSRERQRSKERQRSKERQRSIERQRSKERQRSKERQRSRSK------DALR 684
Query: 570 QKERAKAQE-ERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADERCSR 618
KE+ + E ER R R+ +S D ++ + R ++ D+R R
Sbjct: 685 CKEKPQCNEKERSRE----RRRSKSKDRQRSKEKHRPKDEQQSVDKRRDR 730
Score = 90 (36.7 bits), Expect = 0.00058, Sum P(2) = 0.00058
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 906 NDSKRSGKDNDKKHRKR---HQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLASTP-ESE 961
N+ KRS + K ++R Q + + L ++ RSK R K R +P E
Sbjct: 790 NERKRSKERQPSKEKQRSRERQRSREPLQSKDRQRSKERQRSRERPAKEARPTRSPRERS 849
Query: 962 NESRHKRHRRDNRNGSRKNGDHEDL 986
++SR R R N SRK D L
Sbjct: 850 SKSRDDRRHRSPTNASRKQKDDTKL 874
Score = 88 (36.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 26/92 (28%), Positives = 40/92 (43%)
Query: 908 SKRSGKDNDK-KHR-KRHQSAHDSLDENEKDRSKNPHRHNS-DRKKPRRLASTPESENES 964
SK + K KHR K Q + D + DRSK R N R K R+ + E +
Sbjct: 703 SKSKDRQRSKEKHRPKDEQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKDR 762
Query: 965 RHKRHRRDNRNGSRKNGDHEDLEDGEYGGESR 996
+ R RR ++ G D + L++ + E +
Sbjct: 763 QRSRERRRSKEGQLSK-DRQGLKERQRSNERK 793
>UNIPROTKB|J9P0H2 [details] [associations]
symbol:SREK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
GeneTree:ENSGT00700000104035 KO:K13165 CTD:140890 OMA:EKEQDKD
EMBL:AAEX03001478 RefSeq:XP_544361.3 Ensembl:ENSCAFT00000044884
GeneID:487233 KEGG:cfa:487233 Uniprot:J9P0H2
Length = 626
Score = 114 (45.2 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 30/93 (32%), Positives = 46/93 (49%)
Query: 891 SKKDGADSDHDDSAENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKN-PHRHNSDR 948
+K + D D E D +R K++DK+ K + D E +KDRSK + D+
Sbjct: 418 NKDKEREKDRDKDKEKDRERERDKEHDKERDKEKEKEQDKEKERDKDRSKEIDEKRKKDK 477
Query: 949 KK---PRRLASTPESENESRHKRHRRDNRNGSR 978
K PR ++ S + SR +R RR +R+ SR
Sbjct: 478 KSRTPPRSYNASRRSRSSSRERRRRR-SRSSSR 509
Score = 86 (35.3 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 908 SKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHR-HNSDRKKPRRLASTPESENESRH 966
S RS + + RK +S N+KD+ + R H S+R++ R +ST +S N+ R
Sbjct: 507 SSRSPRTSKTIKRKSSRSPSPR-SRNKKDKKREKERDHISERRERERSSSTRKSSND-RD 564
Query: 967 KRHRRDNRNGSRKNGDHEDLEDGEYGGE 994
+ + + N S K +H D G E
Sbjct: 565 GKEKLEKNNTSLKEKEHSKEPDLSVGKE 592
Score = 80 (33.2 bits), Expect = 0.00091, Sum P(3) = 0.00091
Identities = 31/109 (28%), Positives = 52/109 (47%)
Query: 484 RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFE 543
R+ +RK E + +K++ ++R + +K RD K E E K
Sbjct: 372 RSRDKRKDT-REKIKEKERVKEKDREKEREKERDREK---EREKEKERGKNKDKEREKDR 427
Query: 544 NDERFKALERERDRKDMFDDHLDELKQKERAKAQE---ERKRNIIEYRK 589
+ ++ K ERERD++ D D+ K+KE+ K +E +R + I E RK
Sbjct: 428 DKDKEKDRERERDKEH--DKERDKEKEKEQDKEKERDKDRSKEIDEKRK 474
Score = 52 (23.4 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 21/128 (16%), Positives = 56/128 (43%)
Query: 495 EYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERE 554
E Q ++ EE ++++A+ +E ++ + ++ + + R +
Sbjct: 265 EMTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHS 324
Query: 555 RDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEADE 614
R RK H + R++ Q++R+R+ ++K +S + K+ ++ R R + E
Sbjct: 325 R-RKRSQSKHRSRSHNRSRSR-QKDRRRSKSPHKKRSKSRERRKSRSRSRSRDKRKDTRE 382
Query: 615 RCSRLDKM 622
+ +++
Sbjct: 383 KIKEKERV 390
Score = 47 (21.6 bits), Expect = 0.00063, Sum P(3) = 0.00063
Identities = 7/16 (43%), Positives = 14/16 (87%)
Query: 14 QVPHQPPMVGSMDPPR 29
++P QPP++G++DP +
Sbjct: 162 EIP-QPPLMGNVDPSK 176
>UNIPROTKB|A4R0T9 [details] [associations]
symbol:PXR1 "Protein PXR1" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000467 Pfam:PF01585 PROSITE:PS50174 SMART:SM00443
GO:GO:0005730 GO:GO:0003676 EMBL:CM001231 GO:GO:0006364
eggNOG:NOG263032 RefSeq:XP_003709924.1 STRING:A4R0T9
EnsemblFungi:MGG_16274T0 GeneID:12985297 KEGG:mgr:MGG_16274
OrthoDB:EOG4RFQ32 Uniprot:A4R0T9
Length = 346
Score = 115 (45.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 28/92 (30%), Positives = 50/92 (54%)
Query: 895 GAD-SDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLD-ENEKDRSKNPHRHNSDRKKPR 952
G D + +DSA++ SK+S K +K R++ + A D + E+E+ R K + +RK+ R
Sbjct: 203 GDDVTSEEDSAKSKSKKSHKSKKEKKRRKEEPASDEQESEDEESREKRRKKEKKERKERR 262
Query: 953 RLASTPESENESRHKRHRRDNRNGSRKNGDHE 984
R + E + + K+ R ++ + S N D E
Sbjct: 263 R----EKREKKLKKKQQREEDSSSSEANSDDE 290
Score = 48 (22.0 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 11/36 (30%), Positives = 23/36 (63%)
Query: 551 LERERDRKDMFDDHLDELKQKERAKAQEERKRNIIE 586
+++E+ RK DD DE + KE + +++K+++ E
Sbjct: 164 VKKEKKRKAGRDDD-DEAQSKEERRRAKKQKKSMKE 198
>UNIPROTKB|Q14152 [details] [associations]
symbol:EIF3A "Eukaryotic translation initiation factor 3
subunit A" species:9606 "Homo sapiens" [GO:0005198 "structural
molecule activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA;NAS] [GO:0001732 "formation of translation initiation
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006413 "translational initiation" evidence=IC;TAS] [GO:0003743
"translation initiation factor activity" evidence=IC;IDA]
[GO:0005852 "eukaryotic translation initiation factor 3 complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=TAS] [GO:0006412
"translation" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] Reactome:REACT_71 Reactome:REACT_17015
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
GO:GO:0005730 Pathway_Interaction_DB:mtor_4pathway GO:GO:0005198
EMBL:CH471066 GO:GO:0003743 Pathway_Interaction_DB:il2_pi3kpathway
GO:GO:0005852 eggNOG:NOG236708 HOGENOM:HOG000246822 KO:K03254
OMA:QDRDEND HAMAP:MF_03000 HOVERGEN:HBG006128 GO:GO:0001732
EMBL:U58046 EMBL:U58047 EMBL:U78311 EMBL:D50929 EMBL:AL355598
IPI:IPI00029012 RefSeq:NP_003741.1 UniGene:Hs.523299
ProteinModelPortal:Q14152 DIP:DIP-31114N IntAct:Q14152
MINT:MINT-1519859 STRING:Q14152 PhosphoSite:Q14152 DMDM:6685537
UCD-2DPAGE:Q14152 PaxDb:Q14152 PeptideAtlas:Q14152 PRIDE:Q14152
Ensembl:ENST00000369144 GeneID:8661 KEGG:hsa:8661 UCSC:uc001ldu.3
CTD:8661 GeneCards:GC10M120794 H-InvDB:HIX0170434 HGNC:HGNC:3271
HPA:HPA038315 HPA:HPA038316 MIM:602039 neXtProt:NX_Q14152
PharmGKB:PA27699 InParanoid:Q14152 OrthoDB:EOG4B2SWM
PhylomeDB:Q14152 Reactome:REACT_1762 ChiTaRS:EIF3A GenomeRNAi:8661
NextBio:32483 ArrayExpress:Q14152 Bgee:Q14152 CleanEx:HS_EIF3A
Genevestigator:Q14152 GermOnline:ENSG00000107581 Uniprot:Q14152
Length = 1382
Score = 98 (39.6 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E + W+Q I +
Sbjct: 678 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQ 737
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 738 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 791
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 792 EERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 850
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 851 LE-EVERKKRQRELEIEERERRREEERRL 878
Score = 75 (31.5 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 895 GADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRL 954
G + S E + R K+ D+ ++ R ++ D E E+DR ++ R + R+ PR
Sbjct: 1190 GPPRESRPSEEREWDRE-KERDRDNQDREENDKDP--ERERDRERDVDREDRFRR-PRDE 1245
Query: 955 AST---PESENESRHKRHRRDNRNGSRKNGDHEDLED 988
P E+ S RRD+R+ + + +D D
Sbjct: 1246 GGWRRGPAEESSSWRDSSRRDDRDRDDRRRERDDRRD 1282
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(3) = 0.00068
Identities = 27/106 (25%), Positives = 43/106 (40%)
Query: 211 YYFNKRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE 268
Y K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 32 YDVMKSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDV 89
Query: 269 ----LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LK+A E+ E A + Q +I P SV+ + S +
Sbjct: 90 VRAYLKMAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 135
>UNIPROTKB|J3QTA0 [details] [associations]
symbol:WAC "WW domain-containing adapter protein with
coiled-coil" species:9606 "Homo sapiens" [GO:0005681 "spliceosomal
complex" evidence=IEA] InterPro:IPR001202 Pfam:PF00397
PROSITE:PS01159 PROSITE:PS50020 SMART:SM00456 Gene3D:2.20.70.10
SUPFAM:SSF51045 EMBL:AL161936 EMBL:AL358234 HGNC:HGNC:17327
ChiTaRS:WAC ProteinModelPortal:J3QTA0 Ensembl:ENST00000414108
Uniprot:J3QTA0
Length = 233
Score = 115 (45.5 bits), Expect = 0.00073, P = 0.00073
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTSPDGRKY 252
DW EH S+ G++YY+N RT VS W+KP E + +R + + P R Y
Sbjct: 89 DWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEANKMAVNSFPKDRDY 142
>ZFIN|ZDB-GENE-050809-38 [details] [associations]
symbol:arhgap12a "Rho GTPase activating protein 12a"
species:7955 "Danio rerio" [GO:0005622 "intracellular"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005543 "phospholipid binding" evidence=IEA] Pfam:PF00169
InterPro:IPR000198 InterPro:IPR001202 InterPro:IPR001452
InterPro:IPR001849 InterPro:IPR008936 Pfam:PF00397 Pfam:PF00620
PROSITE:PS50002 PROSITE:PS50003 PROSITE:PS50020 PROSITE:PS50238
SMART:SM00233 SMART:SM00324 SMART:SM00326 SMART:SM00456
ZFIN:ZDB-GENE-050809-38 GO:GO:0007165 Gene3D:1.10.555.10
SUPFAM:SSF48350 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 SUPFAM:SSF50044 GeneTree:ENSGT00700000104029
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR015767
PANTHER:PTHR23181 HOGENOM:HOG000294167 HOVERGEN:HBG005328
EMBL:CR457482 IPI:IPI00510639 RefSeq:NP_001119879.1
UniGene:Dr.82655 SMR:B0UYK1 Ensembl:ENSDART00000050403
Ensembl:ENSDART00000142804 GeneID:563267 KEGG:dre:563267 CTD:563267
NextBio:20884816 Uniprot:B0UYK1
Length = 831
Score = 85 (35.0 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTD 240
DW+ H +GR YY+N+ T+ TW KP ++ R + D
Sbjct: 252 DWETHKDQNGRHYYYNRSTQERTW-KPPRARDSLPRKEEKHD 292
Score = 70 (29.7 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 38/155 (24%), Positives = 70/155 (45%)
Query: 421 VRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRRY 480
++G V A ++K+ ++H +L+ + + LL+S + G W +AL I+ +
Sbjct: 508 LKGGSVDWASKDKS-SKKHVL---ELKTRQGTELLLQSDSDGLVNDWHKALTEAIHTYMW 563
Query: 481 GALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
+ + E E +K D E+ R KKARD KK S++ + +K V
Sbjct: 564 ESDEAIEEDMPESPE----NEKHDKEKDRKNSKKARD-IKKTA--SMDNAEQKKKNKLVV 616
Query: 541 MFENDERFKALERERDRKD-MFDDHLDELKQKERA 574
+ +A++ + KD +F L L Q+E +
Sbjct: 617 LLLGRPTLQAVKDKGYIKDQVFGCSLSSLCQRENS 651
Score = 63 (27.2 bits), Expect = 0.00076, Sum P(3) = 0.00076
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 241 WKEFTSPDGRKYYYNKVTKQSKWSLP 266
W T GR YYY+ +S+W LP
Sbjct: 342 WLRHTDERGRLYYYSADGSRSEWELP 367
>UNIPROTKB|J9P504 [details] [associations]
symbol:EIF5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] InterPro:IPR000795
InterPro:IPR004161 InterPro:IPR005225 Pfam:PF00009 Pfam:PF03144
PRINTS:PR00315 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0003924
GO:GO:0006184 InterPro:IPR009000 SUPFAM:SSF50447
Gene3D:3.40.50.10050 InterPro:IPR015760 InterPro:IPR023115
PANTHER:PTHR23115:SF41 Pfam:PF11987 SUPFAM:SSF52156
GeneTree:ENSGT00690000102102 EMBL:AAEX03007444 EMBL:AAEX03007445
Ensembl:ENSCAFT00000049978 Uniprot:J9P504
Length = 1219
Score = 97 (39.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 41/177 (23%), Positives = 78/177 (44%)
Query: 417 RKDAVRGEKVSDALE-EKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQALRAII 475
+K+ R ++ + + K E+E K ++K + K E A V S T D A+
Sbjct: 237 KKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQSQKKSEEEA-VKSKVTLDTG--AVP 293
Query: 476 NDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRW 535
G T E ++ KKK+ E+ + +K + K ++ E + +
Sbjct: 294 ASEEKGETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEALAKLKE 353
Query: 536 SKAVTMFENDERFKALER-ERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFL 591
+ E +ER K LE E RK+ ++ L++ K++ + + ++ERK + + K L
Sbjct: 354 EEERQKREEEERIKRLEELEAKRKE--EERLEQEKRERKKQKEKERKERLKKEGKLL 408
Score = 80 (33.2 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 27/110 (24%), Positives = 48/110 (43%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKK- 950
+ +G++ D +D +D K +GK DKK K S +S +++ DR+K ++ +++
Sbjct: 555 ESEGSEGDEEDEKVSDEKDAGKMLDKKPSKEMSS--ESEYDSDDDRTKEERAYDKAKRRI 612
Query: 951 -PRRLASTPESENESRHKR------HRRDNRNGSRKNGDHEDLEDGEYGG 993
RRL + E H + H ++DGE GG
Sbjct: 613 EKRRLEHSKNVNTEKLRAPVICVLGHVDTGKTKILDKLRHTHVQDGEAGG 662
>UNIPROTKB|I3LF64 [details] [associations]
symbol:ZRSR2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR000571 InterPro:IPR009145 InterPro:IPR012677
Pfam:PF00642 PRINTS:PR01848 PROSITE:PS50102 PROSITE:PS50103
SMART:SM00356 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 GO:GO:0003723
PANTHER:PTHR12620 GeneTree:ENSGT00530000063193 OMA:EDAFIEE
EMBL:FP102132 Ensembl:ENSSSCT00000028847 Uniprot:I3LF64
Length = 479
Score = 89 (36.4 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 27/91 (29%), Positives = 39/91 (42%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKK---HRKRHQSAHDSLDENEK-DRSKNPHRHNSD 947
+ G + + E + KR G KK HR + + H S K DRS+ +
Sbjct: 386 RSPGPARSYKRNGEAERKRRGSHGAKKSHKHRSKSRERHSSRSRGRKRDRSRGRGSRSRS 445
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSR 978
R + R S S++ SR R R R+GSR
Sbjct: 446 RSRRSRSHSRSRSQSSSR-SRSRGGRRSGSR 475
Score = 79 (32.9 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 34/138 (24%), Positives = 62/138 (44%)
Query: 490 KTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFK 549
K + +Y KK+ ++RR +L + RD EE E + + +ER
Sbjct: 12 KLSHKKYRAALKKEKRKKRRQELARLRDSGLSQKEEEEEAAVAAVDAFIEEQQLEEERLL 71
Query: 550 ALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDR 609
+ER++ ++ L E K +E + ++E++ RK E + K +W + Q R
Sbjct: 72 EIERQKLHEEWL---LREQKAQEEFRIKKEKEEAA---RKRQEEQER-KLKEEWEE-QQR 123
Query: 610 LEADERCSRL-DKMDRLE 626
E +E +L +K +R E
Sbjct: 124 KEREEEQQKLQEKKEREE 141
>UNIPROTKB|E2QS34 [details] [associations]
symbol:CCAR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=IEA] [GO:0006915
"apoptotic process" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR003034 InterPro:IPR025224
Pfam:PF02037 PROSITE:PS50800 SMART:SM00513 GO:GO:0006915
GO:GO:0003676 Gene3D:1.10.720.30 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0030374 CTD:55749
OMA:MITVNRD InterPro:IPR025954 InterPro:IPR025223 PANTHER:PTHR14304
Pfam:PF14443 Pfam:PF14444 GeneTree:ENSGT00530000063672
EMBL:AAEX03002783 RefSeq:XP_536372.2 Ensembl:ENSCAFT00000021848
GeneID:479230 KEGG:cfa:479230 NextBio:20854441 Uniprot:E2QS34
Length = 1150
Score = 95 (38.5 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 24/85 (28%), Positives = 39/85 (45%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
KK+ D D D + ++SG D DKK + + D E+ KD + +N D P
Sbjct: 814 KKEDRD-DETDEPKPKRRKSGDDKDKKEDRDERKKEDKRKEDSKDDDETEEDNNQDEYDP 872
Query: 952 RRLASTPESENESRHKR--HRRDNR 974
A E E + R + ++RD++
Sbjct: 873 ME-AEEAEDEEDDRDEEEINKRDDK 896
Score = 83 (34.3 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 41/145 (28%), Positives = 69/145 (47%)
Query: 483 LRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKA--VT 540
L T E +T Y Q ++ ER+ + +D+ +K E+ E+++ T WSK T
Sbjct: 580 LPTRSEWETLSRGYKQQLVEKLQGERK-EADGEQDEEEKDDGEAKEISTPTHWSKLDPKT 638
Query: 541 MFENDERFKALE-RERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDFIKA 599
M ND R K LE R K + + L ++ + + Q+E ++ + + K E D
Sbjct: 639 MKVNDLR-KELESRALSSKGLKSQLIARLTKQLKVEEQKEEQKELEKSEKEEEEEDD--- 694
Query: 600 NTQWRKVQDRLEADERCSRLDKMDR 624
RK +D E +ER R ++M+R
Sbjct: 695 ----RKSEDDKEEEER-KRQEEMER 714
Score = 44 (20.5 bits), Expect = 0.00078, Sum P(3) = 0.00078
Identities = 14/56 (25%), Positives = 21/56 (37%)
Query: 90 SLPRPNVQALSSYXXXXXXXXRPVAASYTFAPSSYGQPQ--LIGNVNIGSQQPMSQ 143
+LP N +P+A TF + QPQ L ++ S P+ Q
Sbjct: 207 TLPNQNQSQTQPLLKTPPAVLQPIAPQTTFGVQAQPQPQSLLQAQISAASITPLLQ 262
>UNIPROTKB|F5H335 [details] [associations]
symbol:EIF3A "Eukaryotic translation initiation factor 3
subunit A" species:9606 "Homo sapiens" [GO:0001732 "formation of
translation initiation complex" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0005852
"eukaryotic translation initiation factor 3 complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005737
GO:GO:0005730 GO:GO:0003743 GO:GO:0005852 GO:GO:0001732
EMBL:AL355598 HGNC:HGNC:3271 ChiTaRS:EIF3A IPI:IPI01014951
ProteinModelPortal:F5H335 Ensembl:ENST00000541549
ArrayExpress:F5H335 Bgee:F5H335 Uniprot:F5H335
Length = 1348
Score = 98 (39.6 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 50/209 (23%), Positives = 88/209 (42%)
Query: 424 EKVSDALEEKTVEQE----HFAYANKLEAKNAFKALLESANVGSDWTWDQALRAIINDRR 479
EK L+E+ QE +F A +LE K+ E + W+Q I +
Sbjct: 644 EKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQ 703
Query: 480 YGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDD-YKKMLEESVELTSSTRWSKA 538
+ L E K + L +D + ++LK AR Y++ L++ E + R ++
Sbjct: 704 LEREKAL-EHKNRMSRML-----EDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRL 757
Query: 539 VTMFEN--DERFKALERERDRKDMFDDHLDELKQKERAKAQEERKRNIIEYRKFLESCDF 596
+ER RE++ ++ LK++E + E KR E R++ E
Sbjct: 758 EERKRQRKEERRITYYREKEEEEQRRAEEQMLKEREERERAERAKREE-ELREYQERVKK 816
Query: 597 IKANTQWRKVQDRLEADERCSRLDKMDRL 625
++ + +K Q LE +ER R ++ RL
Sbjct: 817 LE-EVERKKRQRELEIEERERRREEERRL 844
Score = 75 (31.5 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 25/97 (25%), Positives = 44/97 (45%)
Query: 895 GADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRL 954
G + S E + R K+ D+ ++ R ++ D E E+DR ++ R + R+ PR
Sbjct: 1156 GPPRESRPSEEREWDRE-KERDRDNQDREENDKDP--ERERDRERDVDREDRFRR-PRDE 1211
Query: 955 AST---PESENESRHKRHRRDNRNGSRKNGDHEDLED 988
P E+ S RRD+R+ + + +D D
Sbjct: 1212 GGWRRGPAEESSSWRDSSRRDDRDRDDRRRERDDRRD 1248
Score = 51 (23.0 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 26/102 (25%), Positives = 42/102 (41%)
Query: 215 KRTRVSTWDKPFELMTTIERADASTDW-KEFTSPDGRKYYYNKVTKQSKW-SLPDE---- 268
K + TW K E + ++ + D K + +G Y Y + +Q SL D
Sbjct: 2 KSKKHRTWQKIHEPIM-LKYLELCVDLRKSHLAKEGL-YQYKNICQQVNIKSLEDVVRAY 59
Query: 269 LKLAREQAEKASIKGTQSETSPNSQTSISFPSSVVKAPSSAD 310
LK+A E+ E A + Q +I P SV+ + S +
Sbjct: 60 LKMAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGE 101
>ZFIN|ZDB-GENE-030131-2624 [details] [associations]
symbol:waca "WW domain containing adaptor with
coiled-coil a" species:7955 "Danio rerio" [GO:0000993 "RNA
polymerase II core binding" evidence=ISS] [GO:0006974 "response to
DNA damage stimulus" evidence=ISS] [GO:0010390 "histone
monoubiquitination" evidence=ISS] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISS] [GO:0071894 "histone
H2B conserved C-terminal lysine ubiquitination" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR001202 Pfam:PF00397 PROSITE:PS01159
PROSITE:PS50020 SMART:SM00456 ZFIN:ZDB-GENE-030131-2624
GO:GO:0005634 GO:GO:0045893 GO:GO:0006351 GO:GO:0003682
GO:GO:0006974 Gene3D:2.20.70.10 SUPFAM:SSF51045 GO:GO:0000075
GO:GO:0010390 GO:GO:0071894 GO:GO:0000993 HSSP:Q61051 EMBL:AY576994
EMBL:BC048888 IPI:IPI00638645 RefSeq:NP_955954.1 UniGene:Dr.78333
ProteinModelPortal:Q7ZUK7 PRIDE:Q7ZUK7 GeneID:323904
KEGG:dre:323904 CTD:323904 eggNOG:NOG248337 HOGENOM:HOG000013038
HOVERGEN:HBG057585 InParanoid:Q7ZUK7 OrthoDB:EOG42RD73
NextBio:20808481 ArrayExpress:Q7ZUK7 Uniprot:Q7ZUK7
Length = 558
Score = 120 (47.3 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 35/119 (29%), Positives = 57/119 (47%)
Query: 199 DWKEHTSADGRRYYFNKRTRVSTWDKPFELMTTIERADASTDWKEFTS--PDGRKYYYN- 255
DW EH S+ G++YY+N RT VS W+KP E + +R +T + P R Y
Sbjct: 125 DWSEHISSSGKKYYYNCRTEVSQWEKPKEWLEREQRQKEATKTAAVVNSFPKDRDYRREA 184
Query: 256 -KVTKQS----KWSLPDELKLA-REQAEKASIKGTQSETSPNSQTSISFP-SSVVKAPS 307
+ T S K S+ E + + A++ G S +S + + P S V+++P+
Sbjct: 185 MQATPASYSSTKSSIATEKPSSLTPSSSSAAVSGLDVPNSASSASGSTVPVSPVMQSPA 243
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 12/53 (22%), Positives = 19/53 (35%)
Query: 929 SLDENEKDRSKNPHRHNSDRKKPRRLASTPESENESRHKRHRRDNRNGSRKNG 981
SL + + +H+ + PR L + S H N + S NG
Sbjct: 381 SLPPPSSQQPLSTEKHHDNGNSPRTLQRQSSQRSPSPGPNHMGSNSSSSSNNG 433
>ZFIN|ZDB-GENE-060503-229 [details] [associations]
symbol:fam133b "family with sequence similarity
133, member B" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
ZFIN:ZDB-GENE-060503-229 GeneTree:ENSGT00690000102159 CTD:257415
eggNOG:NOG45308 HOVERGEN:HBG088046 InterPro:IPR026766
PANTHER:PTHR31911 EMBL:BX936336 EMBL:CT027751 EMBL:BC076108
EMBL:BC095122 EMBL:BC115144 EMBL:BC128660 IPI:IPI00501968
RefSeq:NP_001073556.1 UniGene:Dr.14852 Ensembl:ENSDART00000089547
GeneID:790942 KEGG:dre:790942 InParanoid:A1A5I1 OMA:PRISIWE
NextBio:20930426 ArrayExpress:A1A5I1 Bgee:A1A5I1 Uniprot:A1A5I1
Length = 259
Score = 96 (38.9 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 24/97 (24%), Positives = 48/97 (49%)
Query: 891 SKKDGADSDHDDSAENDSKRSGKDND-KKHRKRHQSAHDSLDENE--KDRSKNPHRHNSD 947
S+ D +S + D ++ + D +K RK +S +S DE++ KD +H+S+
Sbjct: 165 SETDSRESFKKKRKKTDGEKDKDEKDSRKKRKAERSQSESSDESDVDKDADSKKKKHSSE 224
Query: 948 RKKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHE 984
K+ T +S+ + + K+H++ ++ RK E
Sbjct: 225 EKEK----ITDKSKKKKKKKKHKKHSKKKKRKTSSSE 257
Score = 63 (27.2 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 19/74 (25%), Positives = 43/74 (58%)
Query: 512 LKKARDDYKKMLEESVELTSSTRWSKAVTMFEN--DERFKA-LERERDRKDMFDDHLDEL 568
L + R ++++ E+ L + S+A+ FE+ + R+K LE+ R++ D ++
Sbjct: 34 LSRPRPSWEEVKEQ---LEKKRKGSRALADFEDKMNARWKKELEKNREKVLGGGDKKEKE 90
Query: 569 KQKERAKAQEERKR 582
K+K++ K ++E+K+
Sbjct: 91 KEKDKEKEKKEKKK 104
>UNIPROTKB|E1BVB9 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0006936 InterPro:IPR006018
Pfam:PF02029 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 IPI:IPI00680861 Ensembl:ENSGALT00000021344
ArrayExpress:E1BVB9 Uniprot:E1BVB9
Length = 755
Score = 124 (48.7 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 70/265 (26%), Positives = 108/265 (40%)
Query: 373 VSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEE 432
V + G + T K+ N D K EE K+ E D E
Sbjct: 129 VETRQGRCEIEETETVTKSYQRNNWRQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVE 188
Query: 433 KTVEQEHFAYANKL--EAKNAFKALLE---SANVGSDWTWDQAL--RAIINDRRYGALRT 485
K+ ++E L A+N A+LE S +D ++A R + L+
Sbjct: 189 KSTDKEEVVETKTLAVNAENDTNAMLEGEQSITDAADKEKEEAEKEREKLEAEEKERLKA 248
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
E+K A + +++K+ AEER ++A+ + +K E E + KA E
Sbjct: 249 EEEKKAAEEKQKAEEEKKAAEER----ERAKAEEEKRAAEERERAKAEEERKAA---EER 301
Query: 546 ERFKALERERDRKDMFDDHLDELKQKERAKAQEERK----RNIIEY-RKFLESCDFIKAN 600
ER KA E + ++ + +ERAKA+EERK R E RK E + KA
Sbjct: 302 ERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAEERAKAEKERKAAEERERAKAE 361
Query: 601 TQWRKVQD--RLEADERCSRLDKMD 623
+ R ++ RLEA E+ KM+
Sbjct: 362 EEKRAAEEKARLEA-EKLKEKKKME 385
Score = 47 (21.6 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLASTPESENESRHKRHRRDNR 974
+K +++ Q A LDE +K R + +KK E E + + + R
Sbjct: 494 EKLKEKQQEAAVELDELKKRREERRKILEEEEQKKKQEEAERKIREEEEKKRMKEEIERR 553
Query: 975 NGSRKNGDHEDLEDG 989
+ EDG
Sbjct: 554 RAEAAEKRQKVPEDG 568
>ZFIN|ZDB-GENE-030616-583 [details] [associations]
symbol:acin1a "apoptotic chromatin condensation
inducer 1a" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR003034 PROSITE:PS50800 SMART:SM00513
ZFIN:ZDB-GENE-030616-583 EMBL:AL928674 GeneTree:ENSGT00700000104144
IPI:IPI00902368 Ensembl:ENSDART00000146485 ArrayExpress:F1R6R1
Uniprot:F1R6R1
Length = 1376
Score = 119 (46.9 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 53/187 (28%), Positives = 91/187 (48%)
Query: 414 EETRKDAVRGEKVSDALEEKTVEQEHFAYANKLEAKNAFKALLESANVGSDWTWDQAL-R 472
E K+ + EK ALE + +E+E K + K + LE + + +QAL R
Sbjct: 761 ERLEKEKLEKEKQEQALERERLEKERLEKERKEQEKALERERLEKEKLEKE-KQEQALER 819
Query: 473 AIINDRRYGALRTLGERKTAFNEYLG--QKKKQDAEE--RRLKLKKARDDYKKMLEESVE 528
+ R R E++T E L +K+KQ+ E+ R +L+K + +K +E++E
Sbjct: 820 ERLEKERLEKERK--EQETLEREKLEKLEKEKQEREQALERERLEKEHIEKEKREKEALE 877
Query: 529 LTSSTRWSKAVTMFENDERFKALERERDRKDMFD--DHLD-ELKQKERA---KAQEERKR 582
R K E +ER +A+ERER K+ + + L+ E K++ER +A E+ +
Sbjct: 878 ---RERLEKERLEKERNEREQAIERERQEKEEREREETLEKERKEQERLEKERALEKERE 934
Query: 583 NIIEYRK 589
+E +K
Sbjct: 935 AALELKK 941
Score = 58 (25.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 14/75 (18%), Positives = 27/75 (36%)
Query: 890 HSKKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
H G + S + K+ G+ +KK K+ + + S + + D S
Sbjct: 1196 HKTLTGVEDVKKSSTPEEEKKRGRAREKKVEKKERKSSSSSNTSSSDSDSGSSSSRSSSS 1255
Query: 950 KPRRLASTPESENES 964
+S+ E +S
Sbjct: 1256 SSSSSSSSSSEEEKS 1270
Score = 58 (25.5 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 19/87 (21%), Positives = 36/87 (41%)
Query: 897 DSDHDD-SAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR--KKPRR 953
D+ H + D K+S ++K R R + E + S N +SD R
Sbjct: 1193 DTKHKTLTGVEDVKKSSTPEEEKKRGRAREKKVEKKERKSSSSSNTSSSDSDSGSSSSRS 1252
Query: 954 LASTPESENESRHKRHRRDNRNGSRKN 980
+S+ S + S + + + +G R++
Sbjct: 1253 SSSSSSSSSSSSSEEEKSCSASGGRRS 1279
>DICTYBASE|DDB_G0293100 [details] [associations]
symbol:DDB_G0293100 "Zinc finger CCHC
domain-containing protein 10" species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001878
SMART:SM00343 dictyBase:DDB_G0293100 GO:GO:0008270 GO:GO:0003676
EMBL:AAFI02000199 eggNOG:NOG271131 RefSeq:XP_629329.1
EnsemblProtists:DDB0191782 GeneID:8629053 KEGG:ddi:DDB_G0293100
InParanoid:Q54C90 OMA:RTINYEK Uniprot:Q54C90
Length = 204
Score = 103 (41.3 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 28/102 (27%), Positives = 52/102 (50%)
Query: 891 SKKDGADSDHDDSAENDSKRS-GKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRK 949
S D +DS D S +DS S D+D S DS E+++D SK+ R + RK
Sbjct: 87 SSDDDSDSSSDSSDSSDSDSSDSSDSDSSDSSSSDS--DSSSESDRD-SKHRKRSSKRRK 143
Query: 950 KPRRLASTPESENE--SRHKRHRRDNRNGSRKNGDHEDLEDG 989
+S+ + +NE +++K ++R+N ++ + + ++ G
Sbjct: 144 NKSDKSSSKDEDNEKSNKYKVNKRENSRSRSRSSEKKSIDRG 185
Score = 50 (22.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 20/79 (25%), Positives = 35/79 (44%)
Query: 688 KDSPPYMAVASNTSGSTPKDLFEDVVEELQKQFQED----KTRIKDAVKLRKITLSSTWT 743
K P Y++ + T+ K L E + QK +D + ++KD KL+KI
Sbjct: 23 KSKPLYVSRPTRTALLNDKKLLEKTLNSYQKGSTKDNDEKEKKLKDK-KLKKILSKKKKR 81
Query: 744 FEDFKASVLEDATSPPISD 762
+ + +S + +S SD
Sbjct: 82 RKSYSSSDDDSDSSSDSSD 100
>UNIPROTKB|F1NT51 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0017022 "myosin binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030478 "actin cap"
evidence=IEA] InterPro:IPR006017 PRINTS:PR01076 GO:GO:0005886
GO:GO:0006936 GO:GO:0030478 InterPro:IPR006018 Pfam:PF02029
IPI:IPI00572834 GeneTree:ENSGT00700000104480 EMBL:AADN02006542
EMBL:AADN02006543 EMBL:AADN02006544 EMBL:AADN02006545
EMBL:AADN02006546 Ensembl:ENSGALT00000021345 OMA:WRQDGEE
ArrayExpress:F1NT51 Uniprot:F1NT51
Length = 771
Score = 124 (48.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 70/265 (26%), Positives = 108/265 (40%)
Query: 373 VSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEE 432
V + G + T K+ N D K EE K+ E D E
Sbjct: 146 VETRQGRCEIEETETVTKSYQRNNWRQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVE 205
Query: 433 KTVEQEHFAYANKL--EAKNAFKALLE---SANVGSDWTWDQAL--RAIINDRRYGALRT 485
K+ ++E L A+N A+LE S +D ++A R + L+
Sbjct: 206 KSTDKEEVVETKTLAVNAENDTNAMLEGEQSITDAADKEKEEAEKEREKLEAEEKERLKA 265
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
E+K A + +++K+ AEER ++A+ + +K E E + KA E
Sbjct: 266 EEEKKAAEEKQKAEEEKKAAEER----ERAKAEEEKRAAEERERAKAEEERKAA---EER 318
Query: 546 ERFKALERERDRKDMFDDHLDELKQKERAKAQEERK----RNIIEY-RKFLESCDFIKAN 600
ER KA E + ++ + +ERAKA+EERK R E RK E + KA
Sbjct: 319 ERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAEERAKAEKERKAAEERERAKAE 378
Query: 601 TQWRKVQD--RLEADERCSRLDKMD 623
+ R ++ RLEA E+ KM+
Sbjct: 379 EEKRAAEEKARLEA-EKLKEKKKME 402
Score = 47 (21.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLASTPESENESRHKRHRRDNR 974
+K +++ Q A LDE +K R + +KK E E + + + R
Sbjct: 511 EKLKEKQQEAAVELDELKKRREERRKILEEEEQKKKQEEAERKIREEEEKKRMKEEIERR 570
Query: 975 NGSRKNGDHEDLEDG 989
+ EDG
Sbjct: 571 RAEAAEKRQKVPEDG 585
>UNIPROTKB|P12957 [details] [associations]
symbol:CALD1 "Caldesmon" species:9031 "Gallus gallus"
[GO:0006936 "muscle contraction" evidence=IEA] [GO:0017022 "myosin
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0030016 "myofibril" evidence=IEA]
InterPro:IPR006017 PRINTS:PR01076 GO:GO:0005856 GO:GO:0030016
GO:GO:0006936 InterPro:IPR006018 Pfam:PF02029 EMBL:J04968
EMBL:D17648 EMBL:M28417 EMBL:M60620 EMBL:M59762 EMBL:D17552
EMBL:M26684 IPI:IPI00572834 IPI:IPI00577689 IPI:IPI00583069
PIR:A33430 PIR:A39038 RefSeq:NP_989489.1 UniGene:Gga.4988
DisProt:DP00120 ProteinModelPortal:P12957 STRING:P12957
GeneID:373965 KEGG:gga:373965 CTD:800 eggNOG:NOG127381
HOGENOM:HOG000013012 HOVERGEN:HBG050785 InParanoid:P12957 KO:K12327
NextBio:20813495 Uniprot:P12957
Length = 771
Score = 124 (48.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 70/265 (26%), Positives = 108/265 (40%)
Query: 373 VSSSIGEAVTDNTVAEAKNNLSNMSASDLVGASDKVPPPVTEETRKDAVRGEKVSDALEE 432
V + G + T K+ N D K EE K+ E D E
Sbjct: 146 VETRQGRCEIEETETVTKSYQRNNWRQDGEEEGKKEEKDSEEEKPKEVPTEENQVDVAVE 205
Query: 433 KTVEQEHFAYANKL--EAKNAFKALLE---SANVGSDWTWDQAL--RAIINDRRYGALRT 485
K+ ++E L A+N A+LE S +D ++A R + L+
Sbjct: 206 KSTDKEEVVETKTLAVNAENDTNAMLEGEQSITDAADKEKEEAEKEREKLEAEEKERLKA 265
Query: 486 LGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEND 545
E+K A + +++K+ AEER ++A+ + +K E E + KA E
Sbjct: 266 EEEKKAAEEKQKAEEEKKAAEER----ERAKAEEEKRAAEERERAKAEEERKAA---EER 318
Query: 546 ERFKALERERDRKDMFDDHLDELKQKERAKAQEERK----RNIIEY-RKFLESCDFIKAN 600
ER KA E + ++ + +ERAKA+EERK R E RK E + KA
Sbjct: 319 ERAKAEEERKAAEERAKAEEERKAAEERAKAEEERKAAEERAKAEKERKAAEERERAKAE 378
Query: 601 TQWRKVQD--RLEADERCSRLDKMD 623
+ R ++ RLEA E+ KM+
Sbjct: 379 EEKRAAEEKARLEA-EKLKEKKKME 402
Score = 47 (21.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 16/75 (21%), Positives = 27/75 (36%)
Query: 917 KKHRKRHQSAHDSLDENEKDRSKNPH--RHNSDRKKPRRLASTPESENESRHKRHRRDNR 974
+K +++ Q A LDE +K R + +KK E E + + + R
Sbjct: 511 EKLKEKQQEAAVELDELKKRREERRKILEEEEQKKKQEEAERKIREEEEKKRMKEEIERR 570
Query: 975 NGSRKNGDHEDLEDG 989
+ EDG
Sbjct: 571 RAEAAEKRQKVPEDG 585
>UNIPROTKB|E1BSR5 [details] [associations]
symbol:RBM25 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IEA]
[GO:0003729 "mRNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000504
InterPro:IPR002483 InterPro:IPR012677 Pfam:PF00076 Pfam:PF01480
PROSITE:PS50102 PROSITE:PS51025 SMART:SM00311 SMART:SM00360
GO:GO:0005737 GO:GO:0006915 GO:GO:0000166 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 Gene3D:3.30.70.330 Gene3D:1.20.1390.10
GO:GO:0000381 OMA:EDINAME SUPFAM:SSF101233
GeneTree:ENSGT00700000104356 EMBL:AADN02033574 EMBL:AADN02033573
IPI:IPI00591819 Ensembl:ENSGALT00000015198 Uniprot:E1BSR5
Length = 782
Score = 99 (39.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 30/92 (32%), Positives = 44/92 (47%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKPRRLAS 956
D D D + + D R +D D+ R R +S+ D N KDRS++ + + DR++ R
Sbjct: 295 DRDRDRTKDRDRDRE-RDRDRD-RDRERSS----DRN-KDRSRSREK-SRDRERERERER 346
Query: 957 TPESENESRHKRHRRDNRNGSRKNGDHEDLED 988
E E E +R R R +K ED ED
Sbjct: 347 EREREREREREREREREREKDKKRDREEDEED 378
Score = 73 (30.8 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 24/97 (24%), Positives = 51/97 (52%)
Query: 494 NEYLGQKKKQDAEERRLKLKKARDDYKKML--EE---SVELTSSTR--WSKAVTMFENDE 546
+E ++ D+ R+ K K+ ++DY+ L EE ++E+ R S+ ++ F +
Sbjct: 177 SELNAPSQESDSHPRKKK-KEKKEDYETSLSIEEDINAIEMEEDKRDLISREISKFRDTH 235
Query: 547 RFKALERERDRKDMFDDHLD-ELKQKERAKAQEERKR 582
K LE E+ +K+ ++ E +++ER + +E +R
Sbjct: 236 --KKLEEEKGKKEKERQEIEKERRERERERERERERR 270
>UNIPROTKB|Q02040 [details] [associations]
symbol:AKAP17A "A-kinase anchor protein 17A" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0042113 "B cell
activation" evidence=NAS] [GO:0007165 "signal transduction"
evidence=NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0016607 "nuclear speck"
evidence=IDA] [GO:0043484 "regulation of RNA splicing"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0051018
"protein kinase A binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR012677 PROSITE:PS50102
GO:GO:0007165 GO:GO:0006355 GO:GO:0008380 GO:GO:0000166
GO:GO:0016607 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0005681
GO:GO:0003723 GO:GO:0042113 GO:GO:0043484 EMBL:L03426 EMBL:M99578
EMBL:AL683807 EMBL:BC028151 EMBL:BC110496 EMBL:BC110497
IPI:IPI00024024 IPI:IPI00643565 IPI:IPI00845316 PIR:A46419
PIR:I54325 RefSeq:NP_005079.2 UniGene:Hs.522572
ProteinModelPortal:Q02040 IntAct:Q02040 MINT:MINT-1443812
STRING:Q02040 PhosphoSite:Q02040 DMDM:146291102 PaxDb:Q02040
PRIDE:Q02040 Ensembl:ENST00000313871 Ensembl:ENST00000381261
Ensembl:ENST00000474361 GeneID:8227 KEGG:hsa:8227 UCSC:uc004cqa.3
UCSC:uc010ncx.1 CTD:8227 GeneCards:GC0XP001710 HGNC:HGNC:18783
HPA:HPA043247 MIM:312095 MIM:465000 neXtProt:NX_Q02040
PharmGKB:PA162402969 eggNOG:NOG271981 InParanoid:Q02040 KO:K13169
OMA:QKDREVR OrthoDB:EOG45HRWT PhylomeDB:Q02040 GenomeRNAi:8227
NextBio:30970 Bgee:Q02040 CleanEx:HS_SFRS17A Genevestigator:Q02040
GermOnline:ENSG00000197976 GO:GO:0051018 Uniprot:Q02040
Length = 695
Score = 93 (37.8 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 32/109 (29%), Positives = 50/109 (45%)
Query: 891 SKKDGADSDHDDSAENDSKRSGK-------DNDKKHRKRHQSAHDSLDENEKDRSKNPHR 943
S+KD S+ D SK G+ D K+ R R + A S ++ + + PH+
Sbjct: 568 SRKD-TRSEQDKCNREPSKGRGRATGDGLADRHKRERSRARRA-SSREDGRPRKERRPHK 625
Query: 944 -HNSDRKKPRRLASTPE------SENESRHKRHRRDNRNGS--RKNGDH 983
H PRR +++P+ S ++ RH+R R R GS RK+ H
Sbjct: 626 KHAYKDDSPRRRSTSPDHTRSRRSHSKDRHRRERSRERRGSASRKHSRH 674
Score = 78 (32.5 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 34/177 (19%), Positives = 81/177 (45%)
Query: 501 KKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFENDERFKALERERDRKDM 560
K +D + +K + D K + + S++ R K + + E K E+E + +
Sbjct: 242 KGEDGKAVACNIKVSFDSTKHLSDASIKKRQLER-QKLQELEQQREEQKRREKEAEERQR 300
Query: 561 FDDH----LDEL----KQKERAKAQEERKRNIIEYRKFLESCDFIKANTQWRKVQDRLEA 612
++ L+EL K++E+ + +E+++R+ E R+ + + ++A Q +++Q++++
Sbjct: 301 AEERKQKELEELERERKREEKLRKREQKQRDR-ELRRNQKKLEKLQAEEQ-KQLQEKIKL 358
Query: 613 DERCSRLDKMDRLEIFXXXXXXXXXXXXXXXXXXXXXXSKTERKNRDEFRKLMEADV 669
+ER L + + L+ K + ++E R+L EA++
Sbjct: 359 EERKLLLAQRN-LQSIRLIAELLSRAKAVKLREQEQKEEKLRLQQQEERRRLQEAEL 414
>GENEDB_PFALCIPARUM|PFD0207c [details] [associations]
symbol:PFD0207c "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0020011
"apicoplast" evidence=RCA] InterPro:IPR000156 SMART:SM00160
GO:GO:0046907 EMBL:AL844503 RefSeq:XP_001351355.1
ProteinModelPortal:Q8I1Y6 PRIDE:Q8I1Y6
EnsemblProtists:PFD0207c:mRNA GeneID:812454 KEGG:pfa:PFD0207c
EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP ProtClustDB:CLSZ2433358
Uniprot:Q8I1Y6
Length = 639
Score = 96 (38.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR-KKPRR-- 953
D ++DD END DN++ +++ D+ E D + + + NS++ KK R
Sbjct: 346 DEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDNDDVNEINSEKNKKSARKS 405
Query: 954 --LASTPESENESRHK 967
L TP+ ENE +
Sbjct: 406 LHLKETPKDENEEEEE 421
Score = 74 (31.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 468 DQALRAIINDRRYGALRTLG-ERKTAFNEYLGQ--KKKQDAEERRLKLKKARDDYKKMLE 524
+ + IIND+ + G +RK +F E + +KK + +E++ K K+ + + K +
Sbjct: 82 EDSCNIIINDKNKMKKKKNGKDRKNSFAEETKKTIQKKSNVKEKKRK-KELKKNKKVTSD 140
Query: 525 ESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERK 581
E+V + E +E + E E D ++ +D DE ++ E + +E+ +
Sbjct: 141 ENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEE--EDEEDEEEEDEEDEEEEDEE 195
>UNIPROTKB|Q8I1Y6 [details] [associations]
symbol:PFD0207c "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000156 SMART:SM00160 GO:GO:0046907
EMBL:AL844503 RefSeq:XP_001351355.1 ProteinModelPortal:Q8I1Y6
PRIDE:Q8I1Y6 EnsemblProtists:PFD0207c:mRNA GeneID:812454
KEGG:pfa:PFD0207c EuPathDB:PlasmoDB:PF3D7_0404300 OMA:ANEDEFP
ProtClustDB:CLSZ2433358 Uniprot:Q8I1Y6
Length = 639
Score = 96 (38.9 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 22/76 (28%), Positives = 37/76 (48%)
Query: 897 DSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR-KKPRR-- 953
D ++DD END DN++ +++ D+ E D + + + NS++ KK R
Sbjct: 346 DEENDDDEENDDNEENDDNEENDDNEENDDNENDDDEENDDNDDVNEINSEKNKKSARKS 405
Query: 954 --LASTPESENESRHK 967
L TP+ ENE +
Sbjct: 406 LHLKETPKDENEEEEE 421
Score = 74 (31.1 bits), Expect = 0.00092, Sum P(2) = 0.00092
Identities = 27/117 (23%), Positives = 56/117 (47%)
Query: 468 DQALRAIINDRRYGALRTLG-ERKTAFNEYLGQ--KKKQDAEERRLKLKKARDDYKKMLE 524
+ + IIND+ + G +RK +F E + +KK + +E++ K K+ + + K +
Sbjct: 82 EDSCNIIINDKNKMKKKKNGKDRKNSFAEETKKTIQKKSNVKEKKRK-KELKKNKKVTSD 140
Query: 525 ESVELTSSTRWSKAVTMFENDERFKALERERDRKDMFDDHLDELKQKERAKAQEERK 581
E+V + E +E + E E D ++ +D DE ++ E + +E+ +
Sbjct: 141 ENVRNAEDEEEEEDEDEEEEEEDEEEEEEEEDEEE--EDEEDEEEEDEEDEEEEDEE 195
>WB|WBGene00006961 [details] [associations]
symbol:xnp-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0008406 "gonad development" evidence=IMP]
[GO:0040025 "vulval development" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0006915 GO:GO:0008406
GO:GO:0003677 GO:GO:0006281 GO:GO:0040035 GO:GO:0004386
GO:GO:0040025 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AF134186 EMBL:FO080106 PIR:T34036
RefSeq:NP_001020958.1 ProteinModelPortal:Q9U7E0 SMR:Q9U7E0
STRING:Q9U7E0 PaxDb:Q9U7E0 GeneID:172077 KEGG:cel:CELE_B0041.7
UCSC:B0041.7 CTD:172077 WormBase:B0041.7 HOGENOM:HOG000199608
InParanoid:Q9U7E0 KO:K10779 NextBio:873923 Uniprot:Q9U7E0
Length = 1359
Score = 105 (42.0 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDRKKP 951
K+ ++S + E K+S K+ +K +KR +++ +S DE+EK K+ KK
Sbjct: 149 KQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEES-DEDEKPSKKS----KKGLKKK 203
Query: 952 RRLASTPESENESRHKRHRRDNRNGSRKNGDHED 985
+ S ESE+E K+ ++ ++ +K + ED
Sbjct: 204 AKSESESESEDEKEVKKSKKKSKKVVKKESESED 237
Score = 72 (30.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 28/109 (25%), Positives = 51/109 (46%)
Query: 472 RAIINDRRYGALRTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTS 531
R I N+R+ + L E++ E KK+ A++R+ + DD + EES +S
Sbjct: 25 RQIENERKEKRAQKLKEKRE--REGKPPPKKRPAKKRKASSSEEDDDDE---EESPRKSS 79
Query: 532 STRWSKAVTMFENDERFKALERERDR-KDMFDDHLDELKQKERAKAQEE 579
+A + E+DE + +R++ + K D E +K+R + E
Sbjct: 80 KKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSE 128
>UNIPROTKB|F1N4V2 [details] [associations]
symbol:CTR9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001162 "positive regulation of histone H3-K79
methylation" evidence=IEA] [GO:0080182 "histone H3-K4
trimethylation" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0070102
"interleukin-6-mediated signaling pathway" evidence=IEA]
[GO:0051571 "positive regulation of histone H3-K4 methylation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0042169 "SH2 domain binding" evidence=IEA] [GO:0035327
"transcriptionally active chromatin" evidence=IEA] [GO:0033523
"histone H2B ubiquitination" evidence=IEA] [GO:0032968 "positive
regulation of transcription elongation from RNA polymerase II
promoter" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0016593 "Cdc73/Paf1 complex" evidence=IEA]
[GO:0010390 "histone monoubiquitination" evidence=IEA] [GO:0007259
"JAK-STAT cascade" evidence=IEA] [GO:0001711 "endodermal cell fate
commitment" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR001440 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 GO:GO:0045944 GO:GO:0071222 GO:GO:0000122
Gene3D:1.25.40.10 InterPro:IPR013105 Pfam:PF07719 GO:GO:0019827
GO:GO:0035327 GO:GO:0051571 GO:GO:0032968 GO:GO:0033523
GO:GO:0010390 GO:GO:0080182 GO:GO:0007259 GO:GO:0016593
GO:GO:0001711 GO:GO:0045638 OMA:TQNDTYS GO:GO:0070102 GO:GO:2001162
GeneTree:ENSGT00390000005097 EMBL:DAAA02040707 EMBL:DAAA02040708
EMBL:DAAA02040709 IPI:IPI00690723 Ensembl:ENSBTAT00000035398
Uniprot:F1N4V2
Length = 1175
Score = 92 (37.4 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 42/169 (24%), Positives = 82/169 (48%)
Query: 424 EKVSDALEEKTVEQEHFAYANKLEAKNAFKALLES--ANVGSDWTWDQALRAIINDRRYG 481
++V +A++E + +F+Y +K+ K F L + A SD QA + R+
Sbjct: 779 KEVLNAVKELELAHRYFSYLSKVGDKMRFDLALAATEARQCSDLL-SQAQYHVARARKQD 837
Query: 482 AL-RTLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVT 540
R L ++ E L QK ++ EE+RL+ K ++ KK+LE+ + T K +
Sbjct: 838 EEERELRAKQEQEKELLRQKLLKEQEEKRLREK---EEQKKLLEQRAQYVEKT---KNIL 891
Query: 541 MFEND-ERFKALER-----ERDRKD-MFDDHLDELKQKERAKAQEERKR 582
MF + E K +R R +K FD+ +++ ++ ++++++R
Sbjct: 892 MFTGETEATKEKKRGGGGGRRSKKGGEFDEFVNDDTDEDLPVSKKKKRR 940
Score = 84 (34.6 bits), Expect = 0.00093, Sum P(2) = 0.00093
Identities = 30/106 (28%), Positives = 48/106 (45%)
Query: 892 KKDGADSDHDDSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPH-RHNSDRKK 950
+K GA S+ DS EN +K SG + R R + + D ++ R + P SD +
Sbjct: 1051 RKKGASSE-SDSDENQNK-SGSEAGSPRRSRRSHSDEDSDSDQPARKRRPSGSEQSDNES 1108
Query: 951 PRRLAS-TPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+ S + SE +SR ++ + S + D+E G G ES
Sbjct: 1109 LQSGRSRSAGSEMDSRPASPSAESDHDSERASDNEGSGPGS-GNES 1153
>MGI|MGI:2144305 [details] [associations]
symbol:Ccdc55 "coiled-coil domain containing 55"
species:10090 "Mus musculus" [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0003729 "mRNA binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=ISO] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016607
"nuclear speck" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0032502 "developmental process"
evidence=ISO] MGI:MGI:2144305 GO:GO:0008380 GO:GO:0016607
GO:GO:0003729 GO:GO:0006397 GO:GO:0006913 GO:GO:0030529
EMBL:AL603842 GO:GO:0032502 GO:GO:0000381
GeneTree:ENSGT00700000104144 eggNOG:NOG310283 HOVERGEN:HBG081043
KO:K13206 OrthoDB:EOG43XV3P InterPro:IPR018612 Pfam:PF09745
OMA:NDKYRDR EMBL:AK168573 EMBL:BC089560 IPI:IPI00345960
RefSeq:NP_001012309.1 UniGene:Mm.156195 PhosphoSite:Q5NCR9
PRIDE:Q5NCR9 Ensembl:ENSMUST00000102494 GeneID:237859
KEGG:mmu:237859 UCSC:uc007kgg.1 CTD:237859 InParanoid:Q5NCR9
NextBio:383528 Bgee:Q5NCR9 CleanEx:MM_CCDC55 Genevestigator:Q5NCR9
GermOnline:ENSMUSG00000037958 Uniprot:Q5NCR9
Length = 542
Score = 96 (38.9 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 26/107 (24%), Positives = 51/107 (47%)
Query: 890 HSKKDGADSDHD-DSAENDSKRSGKDNDKKHRKRHQSAHDSLDENEKDRSKNPHRHNSDR 948
H ++ + DH E + K G++ +++ + + S E E+DR +N H S++
Sbjct: 337 HRHREASHKDHYWKKHEQEDKLKGREQEERQDREGKREKYSSREQERDRQRNDHDRYSEK 396
Query: 949 KKPRRLASTPESENESRHKRHRRDNRNGSRKNGDHEDLEDGEYGGES 995
+K R+ E E ++ +R R ++ +G H + E E G+S
Sbjct: 397 EKKRK-----EKEEHTKARRERCED------SGKHREREKPEGHGQS 432
Score = 72 (30.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 27/99 (27%), Positives = 49/99 (49%)
Query: 485 TLGERKTAFNEYLGQKKKQDAEERRLKLKKARDDYKKMLEESVELTSSTRWSKAVTMFEN 544
T+ E + ++E QKKK++ + L K + Y L ++VE+ + + M +
Sbjct: 70 TVYEYDSVYDEM--QKKKEENNPKLLPGKDRKPKYIHNLLKAVEIRKKEQEKR---MEKK 124
Query: 545 DERFKALER-ERDRKDMFDDHLDELKQKERAKAQEERKR 582
+R + +E E D K+ F + K +ERA+ +E KR
Sbjct: 125 IQREREMENGEFDDKEAFVTSAYKKKLEERAEEEEREKR 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.311 0.127 0.362 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 996 818 0.0010 121 3 11 23 0.48 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 124
No. of states in DFA: 617 (66 KB)
Total size of DFA: 412 KB (2197 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 100.10u 0.11s 100.21t Elapsed: 00:00:04
Total cpu time: 100.14u 0.11s 100.25t Elapsed: 00:00:04
Start: Tue May 21 10:22:22 2013 End: Tue May 21 10:22:26 2013
WARNINGS ISSUED: 1