Query 001922
Match_columns 995
No_of_seqs 1040 out of 6789
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 04:48:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001922.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001922hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 4.8E-85 1.6E-89 812.2 37.8 597 20-624 5-753 (768)
2 3rgz_A Protein brassinosteroid 100.0 1.4E-65 4.8E-70 637.4 28.3 494 88-589 174-743 (768)
3 1ziw_A TOLL-like receptor 3; i 100.0 6.8E-60 2.3E-64 581.2 40.2 553 58-614 4-626 (680)
4 4eco_A Uncharacterized protein 100.0 1.5E-58 5E-63 561.2 22.2 507 22-587 25-600 (636)
5 1ziw_A TOLL-like receptor 3; i 100.0 2E-56 6.8E-61 550.3 39.3 531 71-607 7-594 (680)
6 3t6q_A CD180 antigen; protein- 100.0 5.1E-57 1.7E-61 548.0 32.8 490 93-588 34-561 (606)
7 4ecn_A Leucine-rich repeat pro 100.0 2.5E-57 8.6E-62 557.9 29.1 499 21-564 263-865 (876)
8 3t6q_A CD180 antigen; protein- 100.0 4.8E-57 1.6E-61 548.3 29.8 493 114-613 33-563 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 1E-55 3.6E-60 554.4 38.5 522 73-615 9-565 (844)
10 3vq2_A TLR4, TOLL-like recepto 100.0 2.7E-56 9.3E-61 541.6 29.0 527 72-615 15-563 (606)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2.7E-55 9.2E-60 532.9 30.4 511 68-592 32-563 (606)
12 3j0a_A TOLL-like receptor 5; m 100.0 8.6E-54 2.9E-58 537.1 38.1 542 58-620 14-589 (844)
13 2z63_A TOLL-like receptor 4, v 100.0 2.6E-51 8.9E-56 494.3 26.9 505 74-594 13-538 (570)
14 4gt4_A Tyrosine-protein kinase 100.0 8.6E-52 2.9E-56 450.8 19.1 258 687-962 27-305 (308)
15 4asz_A BDNF/NT-3 growth factor 100.0 3.6E-52 1.2E-56 451.7 13.3 262 686-966 13-292 (299)
16 4aoj_A High affinity nerve gro 100.0 1.8E-51 6.2E-56 452.6 18.0 262 686-966 41-322 (329)
17 3omv_A RAF proto-oncogene seri 100.0 3E-51 1E-55 444.2 19.3 263 686-965 36-302 (307)
18 2z81_A CD282 antigen, TOLL-lik 100.0 8.7E-51 3E-55 487.2 21.6 488 57-592 3-515 (549)
19 2z63_A TOLL-like receptor 4, v 100.0 1.3E-49 4.4E-54 479.5 27.8 488 69-568 29-536 (570)
20 4b9d_A Serine/threonine-protei 100.0 1.1E-50 3.9E-55 445.5 14.7 252 686-957 24-277 (350)
21 2z81_A CD282 antigen, TOLL-lik 100.0 9.4E-50 3.2E-54 478.3 23.9 481 97-613 10-513 (549)
22 4eco_A Uncharacterized protein 100.0 8.1E-50 2.8E-54 484.5 20.4 460 114-612 81-602 (636)
23 4aw0_A HPDK1, 3-phosphoinositi 100.0 8.1E-50 2.8E-54 431.4 14.8 249 686-955 32-283 (311)
24 4fih_A Serine/threonine-protei 100.0 1.9E-49 6.6E-54 435.0 17.3 250 686-957 74-324 (346)
25 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-49 8.6E-54 433.0 17.3 254 685-962 57-315 (336)
26 4ase_A Vascular endothelial gr 100.0 1.8E-49 6.3E-54 440.0 15.7 263 685-964 63-348 (353)
27 4ecn_A Leucine-rich repeat pro 100.0 1.6E-48 5.4E-53 479.8 23.5 457 92-588 323-841 (876)
28 2z7x_B TOLL-like receptor 1, v 100.0 1.5E-48 5.1E-53 464.3 21.3 453 95-591 3-485 (520)
29 4fie_A Serine/threonine-protei 100.0 1.9E-48 6.5E-53 437.7 18.2 251 685-957 150-401 (423)
30 3fpq_A Serine/threonine-protei 100.0 1.4E-48 4.9E-53 420.0 16.4 249 688-957 28-283 (290)
31 3hyh_A Carbon catabolite-derep 100.0 3E-48 1E-52 413.6 18.1 247 686-957 13-263 (275)
32 2z7x_B TOLL-like receptor 1, v 100.0 3.3E-48 1.1E-52 461.4 18.0 451 117-612 3-483 (520)
33 3ubd_A Ribosomal protein S6 ki 100.0 1.8E-48 6.1E-53 421.2 11.4 248 686-956 24-281 (304)
34 4g8a_A TOLL-like receptor 4; l 100.0 3.1E-46 1.1E-50 456.1 32.4 553 41-613 8-583 (635)
35 3hmm_A TGF-beta receptor type- 100.0 2E-47 6.8E-52 417.8 17.8 266 686-964 3-298 (303)
36 4g8a_A TOLL-like receptor 4; l 100.0 6.6E-46 2.3E-50 453.2 30.6 508 69-588 53-581 (635)
37 4g31_A Eukaryotic translation 100.0 1.1E-46 3.9E-51 409.4 17.7 252 685-956 4-279 (299)
38 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.5E-45 1.2E-49 439.0 21.9 458 92-591 31-514 (562)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 8.3E-45 2.8E-49 435.8 19.7 455 112-613 29-513 (562)
40 4b99_A Mitogen-activated prote 100.0 1.9E-44 6.5E-49 407.0 16.3 266 686-957 54-345 (398)
41 4f9c_A Cell division cycle 7-r 100.0 7.4E-44 2.5E-48 398.1 19.8 264 683-957 18-353 (361)
42 1jl5_A Outer protein YOPM; leu 100.0 1.8E-42 6E-47 401.6 24.7 402 90-592 9-416 (454)
43 3v47_A TOLL-like receptor 5B a 100.0 1.1E-42 3.9E-47 406.5 22.1 390 141-594 13-415 (455)
44 3v5w_A G-protein coupled recep 100.0 4.4E-43 1.5E-47 410.8 18.0 250 686-957 189-450 (689)
45 1jl5_A Outer protein YOPM; leu 100.0 6.4E-42 2.2E-46 396.9 25.3 419 67-592 10-434 (454)
46 3uto_A Twitchin; kinase, muscl 100.0 1E-42 3.6E-47 412.6 17.7 254 684-957 155-411 (573)
47 2qkw_B Protein kinase; three-h 100.0 1.2E-41 4.1E-46 378.2 22.8 276 683-964 36-316 (321)
48 1ogq_A PGIP-2, polygalacturona 100.0 1.2E-41 4.1E-46 375.8 19.8 293 23-366 2-302 (313)
49 3uim_A Brassinosteroid insensi 100.0 3.3E-41 1.1E-45 375.6 21.0 278 682-962 26-310 (326)
50 2psq_A Fibroblast growth facto 100.0 2.4E-41 8.2E-46 382.5 18.8 261 685-963 80-364 (370)
51 3bz5_A Internalin-J, INLJ; leu 100.0 1.2E-40 4.2E-45 386.5 24.6 364 82-547 32-395 (457)
52 3v47_A TOLL-like receptor 5B a 100.0 1.1E-40 3.8E-45 389.6 23.3 352 92-444 30-412 (455)
53 3kul_A Ephrin type-A receptor 100.0 2.6E-41 8.9E-46 375.6 16.8 267 685-970 48-320 (325)
54 2nru_A Interleukin-1 receptor- 100.0 1E-39 3.4E-44 360.4 27.2 277 681-963 20-306 (307)
55 3zgw_A Maternal embryonic leuc 100.0 5.1E-41 1.7E-45 374.8 16.5 254 682-957 6-261 (347)
56 3fxz_A Serine/threonine-protei 100.0 2.5E-40 8.4E-45 362.9 20.9 252 684-957 18-270 (297)
57 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-41 7.9E-46 384.1 12.0 259 686-963 114-374 (377)
58 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.5E-40 5.1E-45 359.3 17.7 260 685-966 7-267 (268)
59 3soc_A Activin receptor type-2 100.0 7.5E-41 2.6E-45 371.7 15.7 269 686-963 24-318 (322)
60 3fe3_A MAP/microtubule affinit 100.0 2.3E-40 7.9E-45 367.5 18.3 249 685-957 14-265 (328)
61 2qol_A Ephrin receptor; recept 100.0 7.9E-41 2.7E-45 378.5 14.7 261 686-965 45-311 (373)
62 4hcu_A Tyrosine-protein kinase 100.0 1.1E-40 3.8E-45 360.5 15.0 256 686-963 10-266 (269)
63 3lb7_A RAF proto-oncogene seri 100.0 4.8E-40 1.6E-44 362.3 20.3 265 686-967 36-304 (307)
64 1luf_A Muscle-specific tyrosin 100.0 2.1E-40 7.1E-45 372.0 17.4 264 685-966 46-338 (343)
65 3s95_A LIMK-1, LIM domain kina 100.0 2.2E-40 7.4E-45 366.2 17.2 261 686-964 10-283 (310)
66 3p86_A Serine/threonine-protei 100.0 3.8E-40 1.3E-44 363.3 19.1 263 685-965 36-300 (309)
67 3tt0_A Basic fibroblast growth 100.0 2.8E-40 9.7E-45 376.0 18.5 263 685-965 68-354 (382)
68 4euu_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 362.7 21.9 270 686-961 9-307 (319)
69 3tki_A Serine/threonine-protei 100.0 4.1E-40 1.4E-44 365.5 18.5 255 685-957 6-262 (323)
70 3vhe_A Vascular endothelial gr 100.0 2.4E-40 8.2E-45 374.0 16.4 262 685-963 21-355 (359)
71 1rjb_A FL cytokine receptor; k 100.0 6E-40 2.1E-44 368.4 19.1 265 685-966 44-337 (344)
72 3l9p_A Anaplastic lymphoma kin 100.0 8.9E-41 3E-45 377.6 12.3 262 685-964 70-346 (367)
73 2ivs_A Proto-oncogene tyrosine 100.0 3.4E-40 1.2E-44 365.4 16.2 261 685-963 22-311 (314)
74 1qcf_A Haematopoetic cell kina 100.0 3E-40 1E-44 384.2 16.3 259 686-966 188-447 (454)
75 3niz_A Rhodanese family protei 100.0 1.4E-39 4.8E-44 359.4 20.7 266 684-956 19-300 (311)
76 4eqm_A Protein kinase; transfe 100.0 5.8E-40 2E-44 359.5 17.4 265 685-966 10-278 (294)
77 3bz5_A Internalin-J, INLJ; leu 100.0 1.8E-39 6.1E-44 376.7 22.2 357 109-593 37-393 (457)
78 3poz_A Epidermal growth factor 100.0 3.9E-40 1.3E-44 366.7 15.9 260 686-965 15-280 (327)
79 2yab_A Death-associated protei 100.0 3.8E-39 1.3E-43 362.0 23.9 254 684-957 10-273 (361)
80 3kex_A Receptor tyrosine-prote 100.0 3.1E-40 1E-44 367.4 14.7 262 686-967 13-280 (325)
81 3gen_A Tyrosine-protein kinase 100.0 2.8E-40 9.7E-45 360.2 14.0 258 685-964 23-281 (283)
82 1t46_A HOMO sapiens V-KIT hard 100.0 9.6E-40 3.3E-44 361.6 18.2 262 685-963 22-307 (313)
83 1tki_A Titin; serine kinase, m 100.0 1.2E-39 4.1E-44 361.2 18.6 253 684-957 3-258 (321)
84 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.5E-40 1.9E-44 381.6 15.7 263 686-970 184-447 (452)
85 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-39 5E-44 355.6 18.1 262 685-963 23-288 (289)
86 1o6l_A RAC-beta serine/threoni 100.0 1.2E-39 4.2E-44 362.6 17.7 249 686-957 5-261 (337)
87 2y0a_A Death-associated protei 100.0 2.8E-39 9.5E-44 359.4 19.9 255 683-957 8-272 (326)
88 1k9a_A Carboxyl-terminal SRC k 100.0 1.9E-39 6.6E-44 376.8 18.9 252 686-964 193-446 (450)
89 1opk_A P150, C-ABL, proto-onco 100.0 1.2E-39 4.1E-44 382.8 17.1 259 686-965 220-480 (495)
90 3ugc_A Tyrosine-protein kinase 100.0 1.3E-39 4.5E-44 357.2 16.2 270 685-964 9-292 (295)
91 1ob3_A PFPK5, cell division co 100.0 2.7E-39 9.2E-44 353.3 18.6 265 686-957 2-281 (288)
92 2pvf_A Fibroblast growth facto 100.0 1.6E-39 5.6E-44 363.1 17.1 261 685-963 34-318 (334)
93 1p4o_A Insulin-like growth fac 100.0 1.4E-39 4.8E-44 361.8 15.9 262 685-964 24-300 (322)
94 1mp8_A Focal adhesion kinase 1 100.0 1.2E-39 4.2E-44 354.7 14.9 258 685-963 14-276 (281)
95 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.6E-39 5.6E-44 361.2 16.1 248 685-957 8-259 (336)
96 3qd2_B Eukaryotic translation 100.0 3.9E-39 1.3E-43 359.8 19.2 255 683-957 3-326 (332)
97 2c30_A Serine/threonine-protei 100.0 8E-39 2.7E-43 354.9 21.4 249 687-957 46-295 (321)
98 2bdw_A Hypothetical protein K1 100.0 5.8E-39 2E-43 361.6 20.6 255 683-957 26-285 (362)
99 3qup_A Tyrosine-protein kinase 100.0 1.1E-39 3.7E-44 362.9 14.1 263 685-965 22-300 (323)
100 3soa_A Calcium/calmodulin-depe 100.0 3.7E-39 1.3E-43 371.6 18.9 258 681-957 6-268 (444)
101 3q4u_A Activin receptor type-1 100.0 8.5E-39 2.9E-43 351.8 20.4 259 685-961 7-300 (301)
102 3gni_B Strad alpha; kinase fol 100.0 6E-39 2E-43 366.4 19.8 276 685-963 24-342 (389)
103 3lzb_A Epidermal growth factor 100.0 2E-39 7E-44 360.7 15.1 259 686-964 15-279 (327)
104 4fr4_A YANK1, serine/threonine 100.0 8.3E-39 2.8E-43 361.1 20.1 251 685-956 14-271 (384)
105 4eut_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 368.2 17.8 273 686-964 9-310 (396)
106 4e5w_A Tyrosine-protein kinase 100.0 9.6E-40 3.3E-44 359.6 12.1 262 686-962 21-301 (302)
107 4dc2_A Protein kinase C IOTA t 100.0 4.2E-39 1.4E-43 364.7 17.6 254 685-957 51-319 (396)
108 3o0g_A Cell division protein k 100.0 1.2E-38 4.2E-43 348.9 20.7 264 686-956 2-282 (292)
109 3t9t_A Tyrosine-protein kinase 100.0 3.2E-39 1.1E-43 348.6 15.8 256 686-963 8-264 (267)
110 2pmi_A Negative RE, cyclin-dep 100.0 9E-39 3.1E-43 354.1 19.2 267 685-957 4-294 (317)
111 3dtc_A Mitogen-activated prote 100.0 1.2E-38 4.1E-43 344.9 19.7 254 686-961 7-271 (271)
112 2xir_A Vascular endothelial gr 100.0 5.4E-39 1.8E-43 356.1 16.9 262 685-963 26-310 (316)
113 1csn_A Casein kinase-1; phosph 100.0 7.9E-39 2.7E-43 351.6 18.0 263 685-963 9-283 (298)
114 2eva_A TAK1 kinase - TAB1 chim 100.0 1.3E-38 4.6E-43 351.0 19.9 258 686-967 8-267 (307)
115 2yex_A Serine/threonine-protei 100.0 2.2E-38 7.6E-43 343.8 21.2 254 684-956 5-261 (276)
116 3c0i_A Peripheral plasma membr 100.0 2.2E-38 7.7E-43 355.8 21.8 252 684-956 22-286 (351)
117 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.4E-39 8.2E-44 362.7 13.7 249 685-956 22-280 (353)
118 1qpc_A LCK kinase; alpha beta 100.0 4.8E-39 1.6E-43 349.7 15.7 256 686-963 13-269 (279)
119 1fot_A TPK1 delta, CAMP-depend 100.0 1E-38 3.5E-43 352.6 18.5 246 686-957 6-259 (318)
120 2izr_A Casein kinase I isoform 100.0 7.9E-39 2.7E-43 356.9 17.7 261 686-963 9-281 (330)
121 2i1m_A Macrophage colony-stimu 100.0 3.1E-39 1.1E-43 360.8 14.5 262 685-963 45-326 (333)
122 1kob_A Twitchin; kinase, intra 100.0 7.8E-39 2.7E-43 362.7 17.6 255 683-957 48-305 (387)
123 3kmu_A ILK, integrin-linked ki 100.0 1.5E-38 5E-43 344.1 18.9 255 686-963 10-270 (271)
124 4f0f_A Serine/threonine-protei 100.0 3.7E-38 1.3E-42 344.2 22.2 255 686-961 19-287 (287)
125 2w4o_A Calcium/calmodulin-depe 100.0 1.1E-38 3.8E-43 357.8 18.5 252 684-957 51-306 (349)
126 3kfa_A Tyrosine-protein kinase 100.0 4.2E-39 1.4E-43 351.9 14.5 259 685-964 12-272 (288)
127 2acx_A G protein-coupled recep 100.0 9.3E-39 3.2E-43 374.9 18.4 254 686-957 184-445 (576)
128 3c1x_A Hepatocyte growth facto 100.0 4.5E-39 1.5E-43 363.6 15.1 259 687-964 90-356 (373)
129 1u59_A Tyrosine-protein kinase 100.0 8.7E-39 3E-43 349.1 16.9 257 687-963 10-272 (287)
130 1o6v_A Internalin A; bacterial 100.0 9.7E-38 3.3E-42 365.1 27.0 147 90-248 44-190 (466)
131 2h8h_A Proto-oncogene tyrosine 100.0 2.6E-39 8.8E-44 383.4 13.7 262 686-969 267-529 (535)
132 3uc3_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 360.3 17.3 253 685-957 19-275 (361)
133 1mqb_A Ephrin type-A receptor 100.0 5.5E-39 1.9E-43 358.3 15.3 262 686-966 44-312 (333)
134 4aw2_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 367.5 16.5 257 685-957 73-339 (437)
135 3a8x_A Protein kinase C IOTA t 100.0 1.2E-38 4E-43 356.4 17.7 253 686-957 9-276 (345)
136 3f66_A Hepatocyte growth facto 100.0 1.1E-38 3.9E-43 350.3 17.3 260 686-964 25-292 (298)
137 3lxp_A Non-receptor tyrosine-p 100.0 1.9E-39 6.5E-44 359.8 11.1 265 688-963 33-310 (318)
138 2zv2_A Calcium/calmodulin-depe 100.0 3.4E-38 1.2E-42 346.4 20.9 249 686-956 13-292 (298)
139 3oz6_A Mitogen-activated prote 100.0 5.1E-39 1.8E-43 366.8 14.4 268 683-957 6-329 (388)
140 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.3E-38 4.6E-43 356.4 17.5 247 685-957 40-294 (350)
141 3pls_A Macrophage-stimulating 100.0 1.7E-38 5.8E-43 348.9 18.0 260 687-964 22-288 (298)
142 3g33_A Cell division protein k 100.0 1.9E-38 6.4E-43 350.3 18.2 267 684-957 7-297 (308)
143 3a62_A Ribosomal protein S6 ki 100.0 1.1E-38 3.8E-43 354.7 16.5 250 685-957 16-277 (327)
144 3lxl_A Tyrosine-protein kinase 100.0 3E-39 1E-43 359.9 11.9 280 686-971 23-311 (327)
145 2yfx_A Tyrosine-protein kinase 100.0 5E-39 1.7E-43 358.1 13.5 262 685-964 29-305 (327)
146 3brb_A Proto-oncogene tyrosine 100.0 8E-39 2.7E-43 354.2 14.9 264 685-966 33-311 (313)
147 3cc6_A Protein tyrosine kinase 100.0 1E-38 3.5E-43 347.4 15.5 258 685-963 11-273 (281)
148 1xjd_A Protein kinase C, theta 100.0 5.9E-39 2E-43 358.1 13.7 249 685-956 16-269 (345)
149 2y94_A 5'-AMP-activated protei 100.0 1.9E-38 6.6E-43 367.9 18.4 248 686-957 16-267 (476)
150 3hko_A Calcium/calmodulin-depe 100.0 2.1E-38 7.2E-43 356.0 17.7 263 680-957 20-331 (345)
151 2a2a_A Death-associated protei 100.0 4.7E-38 1.6E-42 349.2 20.1 255 683-957 9-273 (321)
152 3op5_A Serine/threonine-protei 100.0 8.6E-39 2.9E-43 361.6 14.4 269 685-963 34-329 (364)
153 3mtl_A Cell division protein k 100.0 8E-39 2.7E-43 355.6 13.8 271 686-963 2-290 (324)
154 4fvq_A Tyrosine-protein kinase 100.0 7E-39 2.4E-43 350.3 13.1 252 686-964 8-276 (289)
155 3mdy_A Bone morphogenetic prot 100.0 1.1E-37 3.8E-42 348.8 23.1 268 682-964 33-332 (337)
156 3is5_A Calcium-dependent prote 100.0 4.4E-38 1.5E-42 343.1 19.2 253 684-956 20-278 (285)
157 2i0e_A Protein kinase C-beta I 100.0 2E-38 6.9E-43 354.9 16.9 250 685-957 19-277 (353)
158 3dbq_A Dual specificity protei 100.0 1E-38 3.5E-43 357.8 14.4 251 686-957 9-274 (343)
159 3ork_A Serine/threonine protei 100.0 7.8E-39 2.7E-43 353.8 12.9 262 685-963 11-281 (311)
160 2id5_A Lingo-1, leucine rich r 100.0 6.1E-38 2.1E-42 368.5 21.2 321 238-564 14-334 (477)
161 1o6v_A Internalin A; bacterial 100.0 2.8E-37 9.5E-42 361.3 26.6 210 69-296 47-256 (466)
162 1nxk_A MAP kinase-activated pr 100.0 4E-38 1.4E-42 359.6 18.9 253 685-957 60-322 (400)
163 1fvr_A Tyrosine-protein kinase 100.0 2.4E-38 8.1E-43 352.6 16.2 263 686-969 25-306 (327)
164 4agu_A Cyclin-dependent kinase 100.0 4.5E-38 1.5E-42 347.8 18.3 266 685-957 2-285 (311)
165 2v62_A Serine/threonine-protei 100.0 1.9E-38 6.4E-43 356.0 15.5 267 686-964 37-329 (345)
166 2x4f_A Myosin light chain kina 100.0 4E-38 1.4E-42 356.1 18.2 247 690-956 93-342 (373)
167 2eue_A Carbon catabolite derep 100.0 2.8E-38 9.5E-43 342.8 16.2 246 686-956 13-262 (275)
168 3v8s_A RHO-associated protein 100.0 9.1E-39 3.1E-43 364.1 13.0 254 685-957 68-330 (410)
169 2zmd_A Dual specificity protei 100.0 2.3E-38 7.8E-43 360.6 16.3 251 686-957 56-321 (390)
170 3kn6_A Ribosomal protein S6 ki 100.0 2.7E-38 9.1E-43 351.2 16.3 245 691-957 16-271 (325)
171 2vd5_A DMPK protein; serine/th 100.0 1.2E-38 4.3E-43 363.2 13.8 256 685-957 60-328 (412)
172 3f3z_A Calcium/calmodulin-depe 100.0 6E-38 2.1E-42 340.6 18.6 248 683-956 6-261 (277)
173 3p1a_A MYT1 kinase, membrane-a 100.0 5.1E-38 1.8E-42 347.0 18.3 247 684-956 55-304 (311)
174 2ozo_A Tyrosine-protein kinase 100.0 2.9E-38 9.8E-43 379.7 17.6 251 693-963 343-598 (613)
175 2qr7_A Ribosomal protein S6 ki 100.0 5.2E-38 1.8E-42 350.7 18.4 254 683-957 19-278 (342)
176 3c4z_A Rhodopsin kinase; Ser/T 100.0 5.4E-38 1.8E-42 367.9 19.2 254 686-956 185-448 (543)
177 3llt_A Serine/threonine kinase 100.0 6.2E-38 2.1E-42 354.3 18.7 260 685-956 34-355 (360)
178 2a19_B Interferon-induced, dou 100.0 2.1E-38 7.3E-43 345.5 14.2 253 683-966 8-277 (284)
179 3lm5_A Serine/threonine-protei 100.0 8.1E-38 2.8E-42 348.0 19.0 260 680-957 22-288 (327)
180 2r5t_A Serine/threonine-protei 100.0 3.9E-38 1.3E-42 355.1 16.5 247 686-955 38-288 (373)
181 3cok_A Serine/threonine-protei 100.0 8E-38 2.7E-42 339.8 18.4 250 685-956 10-262 (278)
182 3dls_A PAS domain-containing s 100.0 4E-38 1.4E-42 351.1 16.4 246 682-957 20-275 (335)
183 3kk8_A Calcium/calmodulin depe 100.0 4.8E-38 1.6E-42 342.7 16.6 254 684-957 4-262 (284)
184 1byg_A CSK, protein (C-termina 100.0 2.3E-38 7.9E-43 344.1 13.9 252 685-963 20-273 (278)
185 3i6u_A CDS1, serine/threonine- 100.0 6.3E-38 2.1E-42 360.6 18.2 256 682-957 131-400 (419)
186 1u5q_A Serine/threonine protei 100.0 1.7E-38 5.9E-43 355.7 13.1 251 684-959 52-308 (348)
187 3ttj_A Mitogen-activated prote 100.0 7.6E-38 2.6E-42 363.8 18.5 262 685-957 61-356 (464)
188 4ejn_A RAC-alpha serine/threon 100.0 2.1E-38 7.1E-43 368.3 13.5 250 685-957 147-405 (446)
189 1xbb_A Tyrosine-protein kinase 100.0 3.3E-38 1.1E-42 345.3 14.3 257 686-963 16-279 (291)
190 3bhy_A Death-associated protei 100.0 1.2E-37 4.1E-42 339.4 18.6 260 684-963 3-274 (283)
191 4hgt_A Casein kinase I isoform 100.0 8.3E-38 2.8E-42 343.0 17.4 261 684-963 7-280 (296)
192 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8.1E-38 2.8E-42 353.8 17.8 253 685-964 64-340 (365)
193 1x8b_A WEE1HU, WEE1-like prote 100.0 1.2E-37 4.1E-42 340.3 18.4 248 683-957 8-280 (289)
194 2wqm_A Serine/threonine-protei 100.0 1.4E-37 4.8E-42 343.6 19.1 263 685-964 31-298 (310)
195 3gxj_A TGF-beta receptor type- 100.0 3.7E-39 1.3E-43 355.0 6.3 263 685-965 2-299 (303)
196 2buj_A Serine/threonine-protei 100.0 8.6E-38 2.9E-42 346.6 17.2 264 686-967 29-310 (317)
197 3fdn_A Serine/threonine-protei 100.0 5E-38 1.7E-42 341.6 15.0 248 685-957 8-258 (279)
198 3a7i_A MST3 kinase, serine/thr 100.0 1.4E-37 4.9E-42 342.4 18.8 250 685-957 21-271 (303)
199 2h34_A Serine/threonine-protei 100.0 1.3E-37 4.3E-42 343.6 18.0 264 684-966 32-299 (309)
200 1ua2_A CAK, cell division prot 100.0 1.5E-37 5.1E-42 348.8 18.9 269 682-957 6-292 (346)
201 1b6c_B TGF-B superfamily recep 100.0 1.8E-37 6.2E-42 347.9 19.4 265 682-964 38-337 (342)
202 2r3i_A Cell division protein k 100.0 2.5E-37 8.4E-42 339.8 20.0 272 686-963 3-292 (299)
203 3uzp_A CKI-delta, CKID, casein 100.0 1.2E-37 3.9E-42 341.9 17.2 260 685-963 8-280 (296)
204 1vzo_A Ribosomal protein S6 ki 100.0 4.1E-38 1.4E-42 354.3 13.7 256 685-958 53-323 (355)
205 2wtk_C Serine/threonine-protei 100.0 4.4E-37 1.5E-41 338.8 21.3 254 684-957 3-264 (305)
206 2ac3_A MAP kinase-interacting 100.0 7.3E-38 2.5E-42 347.0 15.1 255 685-957 11-296 (316)
207 2jii_A Serine/threonine-protei 100.0 3E-38 1E-42 355.4 11.4 262 686-963 42-336 (352)
208 1cm8_A Phosphorylated MAP kina 100.0 2E-37 6.7E-42 350.1 18.0 265 685-962 24-315 (367)
209 3nsz_A CK II alpha, casein kin 100.0 6.2E-37 2.1E-41 341.7 21.7 257 686-957 36-320 (330)
210 3rp9_A Mitogen-activated prote 100.0 8E-38 2.7E-42 365.0 15.0 271 685-961 52-403 (458)
211 3g2f_A Bone morphogenetic prot 100.0 9.3E-38 3.2E-42 349.3 14.9 268 686-964 13-319 (336)
212 3eqc_A Dual specificity mitoge 100.0 1.3E-37 4.5E-42 351.6 16.2 263 686-957 33-325 (360)
213 2y7j_A Phosphorylase B kinase 100.0 4.8E-37 1.7E-41 346.7 20.8 256 682-957 90-360 (365)
214 3mwu_A Calmodulin-domain prote 100.0 2.4E-37 8.4E-42 363.4 18.9 259 683-962 19-284 (486)
215 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.2E-37 4E-42 347.0 15.3 265 684-956 32-318 (329)
216 2ycf_A Serine/threonine-protei 100.0 3.8E-37 1.3E-41 342.1 19.3 256 682-957 6-275 (322)
217 2w1i_A JAK2; chromosomal rearr 100.0 2.7E-37 9.3E-42 343.8 18.2 268 686-963 41-322 (326)
218 3nyv_A Calmodulin-domain prote 100.0 2.3E-37 7.9E-42 363.8 18.4 253 684-957 24-282 (484)
219 2jam_A Calcium/calmodulin-depe 100.0 2.2E-37 7.4E-42 341.1 17.0 253 683-957 6-262 (304)
220 3lij_A Calcium/calmodulin depe 100.0 3.7E-37 1.3E-41 362.4 19.9 254 683-957 34-292 (494)
221 2h6d_A 5'-AMP-activated protei 100.0 1.5E-37 5.2E-42 337.2 15.2 248 686-957 11-262 (276)
222 2pml_X PFPK7, Ser/Thr protein 100.0 1.8E-37 6.1E-42 348.9 16.2 261 685-956 30-322 (348)
223 1blx_A Cyclin-dependent kinase 100.0 4.2E-37 1.4E-41 342.5 19.0 272 685-963 10-305 (326)
224 3n9x_A Phosphotransferase; mal 100.0 5.9E-37 2E-41 354.1 20.7 273 685-963 25-370 (432)
225 3eb0_A Putative uncharacterize 100.0 3.5E-37 1.2E-41 350.8 18.4 261 684-957 5-322 (383)
226 2vgo_A Serine/threonine-protei 100.0 2.2E-37 7.6E-42 337.4 16.1 246 686-956 14-262 (284)
227 2w5a_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 340.7 11.7 261 685-962 5-273 (279)
228 3mi9_A Cell division protein k 100.0 4.6E-37 1.6E-41 345.8 19.0 268 685-957 16-312 (351)
229 2clq_A Mitogen-activated prote 100.0 7.7E-37 2.6E-41 335.1 20.1 251 687-956 23-278 (295)
230 2rku_A Serine/threonine-protei 100.0 4.1E-37 1.4E-41 337.2 17.8 250 685-957 14-266 (294)
231 3an0_A Dual specificity mitoge 100.0 2.8E-37 9.6E-42 346.0 16.6 251 686-956 51-310 (340)
232 3sv0_A Casein kinase I-like; t 100.0 6.5E-37 2.2E-41 355.7 20.2 262 685-962 6-277 (483)
233 4aaa_A Cyclin-dependent kinase 100.0 1.4E-37 4.8E-42 346.9 14.1 265 685-956 24-306 (331)
234 4fl3_A Tyrosine-protein kinase 100.0 1.1E-37 3.8E-42 375.4 14.2 250 692-962 375-630 (635)
235 3fme_A Dual specificity mitoge 100.0 3E-37 1E-41 337.6 16.2 252 685-956 6-266 (290)
236 2vwi_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 344.5 11.3 264 685-957 14-288 (303)
237 3pg1_A Mitogen-activated prote 100.0 2.1E-37 7.1E-42 350.3 14.9 269 681-957 17-317 (362)
238 3qyz_A Mitogen-activated prote 100.0 5.3E-37 1.8E-41 346.9 18.1 266 685-957 26-314 (364)
239 2owb_A Serine/threonine-protei 100.0 2.5E-37 8.6E-42 345.3 15.3 250 685-957 40-292 (335)
240 3q5i_A Protein kinase; CDPK, m 100.0 6.4E-37 2.2E-41 361.4 19.5 259 683-962 33-309 (504)
241 4e7w_A Glycogen synthase kinas 100.0 4.7E-37 1.6E-41 350.4 17.4 267 686-963 40-330 (394)
242 1t4h_A Serine/threonine-protei 100.0 5.4E-37 1.8E-41 335.5 17.1 251 686-957 26-283 (290)
243 3kvw_A DYRK2, dual specificity 100.0 1.2E-36 4.1E-41 350.8 20.7 262 684-957 95-409 (429)
244 3com_A Serine/threonine-protei 100.0 5.3E-37 1.8E-41 339.7 17.0 252 683-956 26-278 (314)
245 1j1b_A Glycogen synthase kinas 100.0 5.9E-37 2E-41 352.5 17.9 258 687-957 55-337 (420)
246 2xrw_A Mitogen-activated prote 100.0 7.9E-37 2.7E-41 346.2 18.4 261 685-957 24-319 (371)
247 1z57_A Dual specificity protei 100.0 1.7E-36 6E-41 339.3 21.0 261 685-957 13-329 (339)
248 1u46_A ACK-1, activated CDC42 100.0 2.9E-37 9.8E-42 337.9 14.0 262 685-965 17-286 (291)
249 1wak_A Serine/threonine-protei 100.0 1.8E-36 6.3E-41 347.2 20.4 262 685-957 36-392 (397)
250 2fst_X Mitogen-activated prote 100.0 2.5E-37 8.4E-42 348.8 12.9 261 685-957 28-312 (367)
251 2j0j_A Focal adhesion kinase 1 100.0 3.7E-37 1.3E-41 372.2 15.3 257 685-962 389-650 (656)
252 2y4i_B KSR2, HKSR2, kinase sup 100.0 3.8E-37 1.3E-41 341.7 14.0 262 685-967 32-306 (319)
253 3byv_A Rhoptry kinase; malaria 100.0 6.1E-38 2.1E-42 356.2 7.7 242 685-956 72-359 (377)
254 2j7t_A Serine/threonine-protei 100.0 2.6E-37 8.8E-42 340.2 12.4 253 684-956 17-275 (302)
255 2x7f_A TRAF2 and NCK-interacti 100.0 1.4E-36 4.8E-41 338.3 18.4 252 684-956 22-286 (326)
256 2id5_A Lingo-1, leucine rich r 100.0 4.4E-36 1.5E-40 352.7 22.5 330 236-569 33-362 (477)
257 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-36 3.5E-41 369.5 17.2 249 685-956 340-597 (674)
258 3rgf_A Cyclin-dependent kinase 100.0 1.5E-36 5.1E-41 348.3 17.4 266 685-957 19-334 (405)
259 3cek_A Dual specificity protei 100.0 1E-36 3.5E-41 337.2 15.2 252 685-957 27-293 (313)
260 3e3p_A Protein kinase, putativ 100.0 2E-36 6.8E-41 342.0 17.5 267 681-957 18-315 (360)
261 2b9h_A MAP kinase FUS3, mitoge 100.0 1.3E-36 4.5E-41 342.5 15.5 271 685-962 10-313 (353)
262 2wei_A Calmodulin-domain prote 100.0 2.5E-36 8.5E-41 329.7 17.0 254 682-956 18-276 (287)
263 1phk_A Phosphorylase kinase; g 100.0 1.9E-36 6.4E-41 332.6 16.0 254 683-956 14-283 (298)
264 4exu_A Mitogen-activated prote 100.0 2.1E-36 7.1E-41 342.7 16.9 259 685-957 41-324 (371)
265 3o6n_A APL1; leucine-rich repe 100.0 4.4E-36 1.5E-40 342.9 19.4 334 235-614 45-378 (390)
266 3coi_A Mitogen-activated prote 100.0 4.7E-36 1.6E-40 337.8 19.2 259 686-957 24-306 (353)
267 3fhr_A MAP kinase-activated pr 100.0 2.3E-36 7.8E-41 337.4 16.4 254 684-957 26-288 (336)
268 1zy4_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 332.9 15.6 254 684-957 4-284 (303)
269 3q60_A ROP5B; pseudokinase, tr 100.0 6.6E-37 2.2E-41 347.1 11.7 253 686-956 62-352 (371)
270 3oja_B Anopheles plasmodium-re 100.0 4.6E-36 1.6E-40 361.7 19.5 334 235-614 51-384 (597)
271 3ll6_A Cyclin G-associated kin 100.0 1.2E-36 4.1E-41 340.4 13.4 257 686-963 28-308 (337)
272 2vx3_A Dual specificity tyrosi 100.0 1.2E-35 4E-40 338.1 21.8 265 684-957 52-373 (382)
273 2i6l_A Mitogen-activated prote 100.0 1.6E-36 5.3E-41 336.8 14.2 264 685-956 10-305 (320)
274 3aln_A Dual specificity mitoge 100.0 4.5E-36 1.5E-40 334.3 16.5 253 686-956 22-285 (327)
275 3o6n_A APL1; leucine-rich repe 100.0 1.3E-35 4.3E-40 339.2 20.4 346 46-415 3-351 (390)
276 2eu9_A Dual specificity protei 100.0 1.8E-35 6.1E-40 333.5 20.7 260 685-956 18-333 (355)
277 1q8y_A SR protein kinase; tran 100.0 6.8E-36 2.3E-40 339.4 17.2 260 686-957 19-334 (373)
278 1ogq_A PGIP-2, polygalacturona 100.0 4.5E-36 1.5E-40 331.2 14.8 259 308-620 51-313 (313)
279 3oja_B Anopheles plasmodium-re 100.0 2.1E-35 7.1E-40 356.0 19.9 348 44-442 7-360 (597)
280 2rio_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 342.8 16.6 252 686-956 15-295 (434)
281 3p23_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 341.6 15.8 248 687-956 25-283 (432)
282 2dyl_A Dual specificity mitoge 100.0 1.6E-35 5.4E-40 328.5 14.7 253 685-957 24-284 (318)
283 3a99_A Proto-oncogene serine/t 100.0 4.5E-36 1.5E-40 332.8 10.1 242 685-957 42-294 (320)
284 2iwi_A Serine/threonine-protei 100.0 9.9E-36 3.4E-40 329.1 12.2 245 682-957 27-284 (312)
285 3qa8_A MGC80376 protein; kinas 100.0 1.2E-35 4.2E-40 351.3 11.5 261 684-953 12-294 (676)
286 4fmz_A Internalin; leucine ric 100.0 9.1E-34 3.1E-38 318.5 21.2 304 90-415 42-345 (347)
287 4fmz_A Internalin; leucine ric 100.0 1.5E-33 5.3E-38 316.6 22.2 317 99-439 29-345 (347)
288 3uqc_A Probable conserved tran 100.0 1.9E-34 6.4E-39 313.7 13.7 232 685-965 30-267 (286)
289 2pzi_A Probable serine/threoni 100.0 3.6E-34 1.2E-38 350.0 15.5 240 685-961 79-326 (681)
290 3dzo_A Rhoptry kinase domain; 100.0 1.8E-34 6.3E-39 331.0 11.7 240 687-956 79-363 (413)
291 3m2w_A MAP kinase-activated pr 100.0 1.6E-33 5.5E-38 309.2 17.9 229 684-957 15-257 (299)
292 4fcg_A Uncharacterized protein 100.0 9.2E-34 3.2E-38 314.6 15.0 271 22-344 22-314 (328)
293 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-32 8.4E-37 304.5 24.0 288 284-585 34-331 (332)
294 1xku_A Decorin; proteoglycan, 100.0 2.9E-32 9.8E-37 303.8 23.0 302 46-390 18-330 (330)
295 2vuw_A Serine/threonine-protei 100.0 3.3E-33 1.1E-37 312.2 14.6 240 685-955 19-329 (336)
296 1xku_A Decorin; proteoglycan, 100.0 9.5E-32 3.2E-36 299.6 25.6 290 259-585 31-330 (330)
297 2ft3_A Biglycan; proteoglycan, 100.0 2.9E-32 1E-36 303.9 21.0 246 92-368 54-307 (332)
298 1z7x_W Ribonuclease inhibitor; 100.0 5E-36 1.7E-40 350.9 -20.6 363 114-539 3-411 (461)
299 1z7x_W Ribonuclease inhibitor; 100.0 2.3E-35 7.9E-40 345.2 -17.6 384 137-587 2-440 (461)
300 2z66_A Variable lymphocyte rec 100.0 6.6E-31 2.2E-35 289.5 12.5 282 57-377 6-296 (306)
301 2z80_A TOLL-like receptor 2, v 100.0 8.9E-31 3E-35 294.6 9.1 277 56-369 28-315 (353)
302 3ogk_B Coronatine-insensitive 100.0 1.3E-32 4.4E-37 332.7 -9.8 454 57-583 41-547 (592)
303 2z66_A Variable lymphocyte rec 100.0 1.6E-29 5.6E-34 278.3 14.3 250 95-370 10-263 (306)
304 2z80_A TOLL-like receptor 2, v 100.0 3.3E-29 1.1E-33 281.8 14.6 279 237-543 33-318 (353)
305 3ogk_B Coronatine-insensitive 100.0 3E-32 1E-36 329.5 -12.8 378 184-589 110-528 (592)
306 4fcg_A Uncharacterized protein 100.0 3.2E-28 1.1E-32 270.0 20.1 234 282-586 80-313 (328)
307 3g06_A SSPH2 (leucine-rich rep 100.0 3.3E-29 1.1E-33 298.7 12.8 292 43-403 9-308 (622)
308 3zyi_A Leucine-rich repeat-con 100.0 2.3E-28 7.9E-33 284.5 18.5 247 60-345 56-304 (452)
309 3oja_A Leucine-rich immune mol 100.0 2.3E-31 7.9E-36 311.4 -8.7 236 305-581 32-269 (487)
310 1wwl_A Monocyte differentiatio 100.0 5.9E-29 2E-33 274.3 8.7 254 110-393 39-310 (312)
311 3zyi_A Leucine-rich repeat-con 100.0 9.4E-28 3.2E-32 279.3 19.1 246 96-369 58-304 (452)
312 3zyj_A Leucine-rich repeat-con 100.0 1.1E-27 3.8E-32 277.7 19.3 227 116-368 66-292 (440)
313 3g06_A SSPH2 (leucine-rich rep 99.9 4.1E-27 1.4E-31 280.6 24.3 268 236-574 41-308 (622)
314 1ozn_A Reticulon 4 receptor; N 99.9 2.6E-28 8.8E-33 265.7 12.6 225 117-369 14-239 (285)
315 3o53_A Protein LRIM1, AGAP0063 99.9 4.1E-29 1.4E-33 276.2 5.5 263 265-592 16-281 (317)
316 3zyj_A Leucine-rich repeat-con 99.9 2.2E-27 7.5E-32 275.2 20.1 227 284-539 65-292 (440)
317 1ozn_A Reticulon 4 receptor; N 99.9 3.3E-27 1.1E-31 257.0 19.1 176 238-416 14-190 (285)
318 3o53_A Protein LRIM1, AGAP0063 99.9 8.1E-29 2.8E-33 273.9 5.2 263 95-396 13-280 (317)
319 1wwl_A Monocyte differentiatio 99.9 2.3E-28 7.7E-33 269.6 7.0 236 157-418 38-289 (312)
320 2p1m_B Transport inhibitor res 99.9 1.4E-30 5E-35 314.8 -16.0 456 57-588 34-545 (594)
321 4azs_A Methyltransferase WBDD; 99.9 5.8E-28 2E-32 286.3 3.8 186 694-890 242-438 (569)
322 3oja_A Leucine-rich immune mol 99.9 3.6E-27 1.2E-31 275.9 8.9 240 281-560 32-272 (487)
323 2o6q_A Variable lymphocyte rec 99.9 1.9E-25 6.6E-30 240.7 17.7 217 55-321 2-219 (270)
324 2z62_A TOLL-like receptor 4, v 99.9 1.4E-24 4.7E-29 235.0 15.1 216 83-345 21-238 (276)
325 2p1m_B Transport inhibitor res 99.9 1.9E-28 6.6E-33 296.2 -17.7 408 133-587 61-519 (594)
326 3rfs_A Internalin B, repeat mo 99.9 7.1E-25 2.4E-29 236.5 11.9 227 94-380 21-247 (272)
327 2z62_A TOLL-like receptor 4, v 99.9 5.3E-24 1.8E-28 230.4 18.6 229 288-591 12-241 (276)
328 3rfs_A Internalin B, repeat mo 99.9 2.2E-24 7.5E-29 232.6 15.1 229 138-404 19-247 (272)
329 3en9_A Glycoprotease, O-sialog 99.9 6E-25 2E-29 259.1 10.6 186 689-890 339-538 (540)
330 2ast_B S-phase kinase-associat 99.9 3.2E-26 1.1E-30 255.6 -2.2 265 57-353 36-315 (336)
331 4glp_A Monocyte differentiatio 99.9 7.5E-24 2.5E-28 233.3 14.0 227 92-345 64-308 (310)
332 1p9a_G Platelet glycoprotein I 99.9 2.9E-23 9.9E-28 225.6 17.6 203 134-368 6-208 (290)
333 2o6q_A Variable lymphocyte rec 99.9 1.7E-22 5.7E-27 217.7 21.3 201 236-439 17-217 (270)
334 1p9a_G Platelet glycoprotein I 99.9 4.2E-23 1.4E-27 224.4 16.7 205 109-345 5-209 (290)
335 3goz_A Leucine-rich repeat-con 99.9 3E-25 1E-29 250.1 -2.0 266 239-547 2-305 (362)
336 3goz_A Leucine-rich repeat-con 99.9 5.3E-25 1.8E-29 248.1 -0.8 111 479-589 168-299 (362)
337 4glp_A Monocyte differentiatio 99.9 2.2E-23 7.5E-28 229.5 8.9 224 115-369 65-308 (310)
338 2ast_B S-phase kinase-associat 99.9 1.8E-24 6.1E-29 241.4 0.0 253 94-376 49-314 (336)
339 1h6u_A Internalin H; cell adhe 99.9 2.7E-22 9.1E-27 220.3 17.3 209 96-345 23-231 (308)
340 2ca6_A RAN GTPase-activating p 99.9 1.7E-24 5.7E-29 246.5 -2.5 248 154-419 24-319 (386)
341 2xwt_C Thyrotropin receptor; s 99.9 1.5E-22 5.1E-27 213.9 12.5 196 139-365 32-236 (239)
342 2ca6_A RAN GTPase-activating p 99.9 7.3E-25 2.5E-29 249.5 -5.7 255 84-372 24-320 (386)
343 2xwt_C Thyrotropin receptor; s 99.9 1.9E-22 6.4E-27 213.2 11.8 197 163-390 32-237 (239)
344 4ay9_X Follicle-stimulating ho 99.9 2.2E-22 7.5E-27 225.4 11.6 201 58-297 9-216 (350)
345 1h6u_A Internalin H; cell adhe 99.9 4.1E-22 1.4E-26 218.8 13.0 214 113-369 18-231 (308)
346 2o6s_A Variable lymphocyte rec 99.9 4.3E-22 1.5E-26 205.5 10.9 183 57-284 6-190 (208)
347 3m19_A Variable lymphocyte rec 99.9 4.9E-21 1.7E-25 203.8 18.9 180 236-418 15-194 (251)
348 4ay9_X Follicle-stimulating ho 99.9 2.9E-21 1E-25 216.3 17.3 122 262-386 12-135 (350)
349 1zar_A RIO2 kinase; serine kin 99.8 1.6E-21 5.4E-26 210.5 11.4 145 688-864 92-253 (282)
350 3cvr_A Invasion plasmid antige 99.8 3.8E-22 1.3E-26 234.8 5.8 211 45-308 32-255 (571)
351 3m19_A Variable lymphocyte rec 99.8 2.1E-20 7.3E-25 198.8 18.8 179 259-440 14-192 (251)
352 3cvr_A Invasion plasmid antige 99.8 9.2E-21 3.1E-25 223.1 15.7 189 332-575 60-255 (571)
353 4b8c_D Glucose-repressible alc 99.8 1.7E-21 5.8E-26 238.2 3.5 274 25-345 130-405 (727)
354 2o6s_A Variable lymphocyte rec 99.8 7.8E-20 2.7E-24 188.5 14.7 163 235-404 28-190 (208)
355 1m9s_A Internalin B; cell inva 99.8 6.7E-20 2.3E-24 218.3 11.4 189 93-320 22-210 (605)
356 2v70_A SLIT-2, SLIT homolog 2 99.8 8.2E-20 2.8E-24 189.8 9.6 138 454-591 32-170 (220)
357 1m9s_A Internalin B; cell inva 99.8 1.2E-19 3.9E-24 216.3 12.1 193 112-345 19-211 (605)
358 1h6t_A Internalin B; cell adhe 99.8 8.8E-20 3E-24 198.3 9.3 190 93-321 25-214 (291)
359 3e6j_A Variable lymphocyte rec 99.8 2.7E-19 9.2E-24 187.2 11.7 156 55-249 16-173 (229)
360 1dce_A Protein (RAB geranylger 99.8 5E-21 1.7E-25 226.7 -2.8 186 160-369 347-547 (567)
361 1h6t_A Internalin B; cell adhe 99.8 1.6E-19 5.6E-24 196.2 8.8 192 112-368 22-213 (291)
362 1dce_A Protein (RAB geranylger 99.8 1.4E-20 4.7E-25 222.9 -0.6 202 137-362 348-567 (567)
363 3e6j_A Variable lymphocyte rec 99.8 3E-18 1E-22 179.2 15.6 137 454-591 40-176 (229)
364 2v9t_B SLIT homolog 2 protein 99.8 3.6E-18 1.2E-22 177.3 14.2 109 260-368 33-141 (220)
365 2v70_A SLIT-2, SLIT homolog 2 99.8 4.3E-18 1.5E-22 176.8 14.0 150 239-391 15-165 (220)
366 2v9t_B SLIT homolog 2 protein 99.7 5.3E-18 1.8E-22 176.1 13.7 152 263-417 15-166 (220)
367 2xot_A Amphoterin-induced prot 99.7 2.1E-18 7.1E-23 193.8 11.3 176 238-416 21-202 (361)
368 1w8a_A SLIT protein; signaling 99.7 1.4E-18 4.6E-23 176.5 8.6 155 457-614 11-166 (192)
369 3sb4_A Hypothetical leucine ri 99.7 3.7E-19 1.3E-23 197.4 4.8 282 91-385 24-327 (329)
370 4b8c_D Glucose-repressible alc 99.7 6.6E-19 2.3E-23 215.2 5.8 75 339-416 209-283 (727)
371 1xeu_A Internalin C; cellular 99.7 1.4E-18 4.8E-23 185.7 6.0 170 112-321 17-186 (263)
372 2xot_A Amphoterin-induced prot 99.7 6.5E-18 2.2E-22 189.8 11.6 163 262-427 21-187 (361)
373 1zth_A RIO1 serine protein kin 99.7 1.2E-17 4.2E-22 177.9 11.1 137 688-838 49-219 (258)
374 1xeu_A Internalin C; cellular 99.7 2.5E-17 8.7E-22 176.0 12.8 170 208-393 17-186 (263)
375 4ezg_A Putative uncharacterize 99.7 2.6E-17 9E-22 167.8 11.5 108 232-343 85-193 (197)
376 1w8a_A SLIT protein; signaling 99.7 3.6E-17 1.2E-21 165.9 10.8 162 455-619 30-192 (192)
377 4ezg_A Putative uncharacterize 99.7 4.6E-17 1.6E-21 166.0 10.6 152 232-391 41-193 (197)
378 3sb4_A Hypothetical leucine ri 99.7 1.4E-17 4.8E-22 184.7 5.5 284 112-410 23-328 (329)
379 2ell_A Acidic leucine-rich nuc 99.7 1.1E-16 3.7E-21 158.7 8.8 135 453-589 23-162 (168)
380 2je0_A Acidic leucine-rich nuc 99.6 1.2E-16 4E-21 155.0 7.2 129 453-583 16-149 (149)
381 2wfh_A SLIT homolog 2 protein 99.6 4.7E-16 1.6E-20 157.6 11.3 128 457-588 13-140 (193)
382 2o6r_A Variable lymphocyte rec 99.6 6.9E-16 2.3E-20 154.3 11.7 134 456-592 9-142 (177)
383 2ell_A Acidic leucine-rich nuc 99.6 6.9E-16 2.3E-20 152.9 10.3 136 235-373 24-164 (168)
384 4gyi_A RIO2 kinase; protein ki 99.6 4.9E-16 1.7E-20 171.2 7.9 138 688-838 97-265 (397)
385 2wfh_A SLIT homolog 2 protein 99.6 5.2E-15 1.8E-19 149.9 13.0 128 238-369 13-140 (193)
386 2je0_A Acidic leucine-rich nuc 99.6 1.4E-15 4.9E-20 147.2 7.6 128 235-364 17-149 (149)
387 4fdw_A Leucine rich hypothetic 99.6 1.2E-14 4.2E-19 164.4 16.4 265 114-416 113-383 (401)
388 2o6r_A Variable lymphocyte rec 99.6 9E-15 3.1E-19 146.2 12.6 131 237-370 9-139 (177)
389 4fdw_A Leucine rich hypothetic 99.6 2.8E-14 9.5E-19 161.5 18.0 266 161-440 112-383 (401)
390 1a9n_A U2A', U2A'; complex (nu 99.5 8.3E-15 2.9E-19 146.2 7.2 130 452-587 17-153 (176)
391 1a9n_A U2A', U2A'; complex (nu 99.5 7.7E-15 2.6E-19 146.5 6.0 109 88-199 15-126 (176)
392 4fs7_A Uncharacterized protein 99.5 3.7E-13 1.3E-17 152.9 20.1 67 126-194 59-125 (394)
393 4fs7_A Uncharacterized protein 99.5 4.8E-13 1.7E-17 152.0 19.6 74 109-185 66-139 (394)
394 1ds9_A Outer arm dynein; leuci 99.5 6.5E-16 2.2E-20 157.6 -4.3 125 455-587 49-185 (198)
395 1ds9_A Outer arm dynein; leuci 99.5 4.3E-16 1.5E-20 158.9 -6.3 132 456-592 20-158 (198)
396 3g39_A Variable lymphocyte rec 99.5 7.3E-14 2.5E-18 138.3 9.9 106 456-564 11-116 (170)
397 3g39_A Variable lymphocyte rec 99.5 1.2E-13 4.1E-18 136.8 10.3 109 480-591 11-119 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.5E-13 5.2E-18 136.5 9.9 105 457-564 15-119 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.8E-13 9.5E-18 134.6 10.5 108 481-591 15-122 (174)
400 4gt6_A Cell surface protein; l 99.2 1.3E-10 4.4E-15 131.9 19.3 326 87-438 58-389 (394)
401 3un9_A NLR family member X1; l 99.2 6.3E-14 2.2E-18 157.0 -8.2 167 161-351 71-259 (372)
402 4gt6_A Cell surface protein; l 99.2 1.3E-10 4.3E-15 132.0 19.0 316 109-466 58-390 (394)
403 3un9_A NLR family member X1; l 99.2 8.8E-14 3E-18 155.8 -8.8 45 278-322 206-254 (372)
404 2ifg_A High affinity nerve gro 99.2 9.4E-12 3.2E-16 138.8 7.4 104 458-564 12-117 (347)
405 2ifg_A High affinity nerve gro 99.2 1E-11 3.6E-16 138.4 7.0 104 482-588 12-117 (347)
406 3tm0_A Aminoglycoside 3'-phosp 99.1 1.2E-10 4E-15 124.2 10.3 145 683-836 11-212 (263)
407 1nd4_A Aminoglycoside 3'-phosp 99.0 1.1E-09 3.7E-14 116.6 10.0 129 695-837 29-214 (264)
408 3dxp_A Putative acyl-COA dehyd 98.9 2.8E-09 9.6E-14 119.2 11.9 141 692-837 44-248 (359)
409 4h09_A Hypothetical leucine ri 98.9 2.5E-08 8.7E-13 112.3 19.4 298 91-426 45-355 (379)
410 4h09_A Hypothetical leucine ri 98.9 3.1E-08 1.1E-12 111.6 18.7 302 110-437 42-343 (379)
411 2ra8_A Uncharacterized protein 98.8 7.1E-10 2.4E-14 122.9 1.6 59 282-342 278-341 (362)
412 3rw6_A Nuclear RNA export fact 98.8 5.6E-11 1.9E-15 124.8 -7.2 143 57-203 77-237 (267)
413 2ra8_A Uncharacterized protein 98.8 5.3E-10 1.8E-14 124.0 -0.9 39 330-368 278-320 (362)
414 3sg8_A APH(2'')-ID; antibiotic 98.7 4.5E-09 1.5E-13 114.5 5.2 186 691-890 25-287 (304)
415 3rw6_A Nuclear RNA export fact 98.4 1E-08 3.4E-13 107.6 -3.8 78 501-580 169-257 (267)
416 3r70_A Aminoglycoside phosphot 98.4 1.3E-06 4.4E-11 95.6 12.5 135 688-837 39-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.3 5.7E-08 2E-12 97.0 -0.6 116 84-199 28-164 (185)
418 1io0_A Tropomodulin; LRR prote 98.3 2.5E-08 8.6E-13 99.6 -3.5 86 502-587 65-164 (185)
419 3d1u_A Putative fructosamine-3 98.2 3.7E-06 1.3E-10 90.1 11.1 76 691-771 20-98 (288)
420 4gkh_A Aminoglycoside 3'-phosp 98.2 5.7E-06 1.9E-10 88.1 10.9 135 693-837 31-223 (272)
421 3tdw_A Gentamicin resistance p 98.1 1.1E-05 3.6E-10 87.6 12.6 135 692-837 25-224 (306)
422 3ats_A Putative uncharacterize 98.0 1E-05 3.6E-10 89.9 9.8 81 692-772 26-122 (357)
423 3ovc_A Hygromycin-B 4-O-kinase 98.0 1.7E-05 5.8E-10 88.1 11.2 74 691-771 46-122 (362)
424 2olc_A MTR kinase, methylthior 97.8 6.4E-05 2.2E-09 84.8 11.7 75 692-768 36-120 (397)
425 3e4g_A ATP synthase subunit S, 97.6 8E-06 2.7E-10 79.3 0.5 34 115-148 62-95 (176)
426 3e4g_A ATP synthase subunit S, 97.6 1.1E-05 3.7E-10 78.3 1.2 84 283-366 61-150 (176)
427 2q83_A YTAA protein; 2635576, 97.6 0.00025 8.4E-09 78.1 12.2 138 693-836 39-251 (346)
428 3jr1_A Putative fructosamine-3 97.6 0.00025 8.4E-09 76.5 11.3 136 692-833 42-232 (312)
429 3f7w_A Putative fructosamine-3 97.3 0.00056 1.9E-08 73.2 10.1 76 690-770 19-97 (288)
430 2pyw_A Uncharacterized protein 97.3 0.0011 3.8E-08 75.1 12.1 79 806-886 231-312 (420)
431 1pgv_A TMD-1, tropomodulin TMD 97.0 9E-05 3.1E-09 73.3 -0.6 112 88-199 37-170 (197)
432 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00017 5.9E-09 71.2 -0.3 92 277-368 64-170 (197)
433 3feg_A Choline/ethanolamine ki 96.8 0.0036 1.2E-07 69.3 10.1 140 692-837 56-254 (379)
434 3csv_A Aminoglycoside phosphot 96.8 0.0022 7.6E-08 70.1 8.2 139 693-837 25-217 (333)
435 1nw1_A Choline kinase (49.2 KD 96.8 0.0038 1.3E-07 70.7 10.2 72 692-770 79-159 (429)
436 3dxq_A Choline/ethanolamine ki 96.8 0.0048 1.6E-07 66.3 10.6 71 691-770 23-95 (301)
437 2ppq_A HSK, HK, homoserine kin 96.7 0.0018 6.2E-08 70.4 7.3 142 692-837 28-217 (322)
438 2qg7_A Ethanolamine kinase PV0 96.5 0.016 5.5E-07 65.9 13.0 73 692-770 114-188 (458)
439 1zyl_A Hypothetical protein YI 96.4 0.011 3.9E-07 64.2 11.0 140 693-837 33-223 (328)
440 3rfe_A Platelet glycoprotein I 96.4 0.0032 1.1E-07 58.0 5.2 55 506-562 12-67 (130)
441 3rfe_A Platelet glycoprotein I 96.1 0.009 3.1E-07 55.0 6.6 37 332-368 32-68 (130)
442 3i1a_A Spectinomycin phosphotr 96.1 0.019 6.4E-07 62.8 10.3 31 807-837 206-236 (339)
443 3c5i_A Choline kinase; choline 96.0 0.01 3.5E-07 65.8 8.2 73 692-770 39-121 (369)
444 2yle_A Protein spire homolog 1 95.7 0.02 6.8E-07 56.7 7.4 103 768-889 33-135 (229)
445 3f2s_A CK, chetk-alpha, cholin 95.6 0.039 1.3E-06 61.2 10.3 142 692-837 58-280 (401)
446 3mes_A Choline kinase; malaria 94.2 0.18 6.3E-06 56.3 11.0 73 692-770 76-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.0 1.5 5.2E-05 48.7 11.7 29 809-837 246-280 (401)
448 3cxl_A N-chimerin; SH2, RHO-GA 64.4 0.68 2.3E-05 52.5 -2.6 61 690-753 146-214 (463)
449 4ann_A ESSB; membrane protein, 57.0 18 0.00062 35.6 6.5 115 741-891 43-158 (215)
450 4ano_A ESSB; membrane protein, 56.0 27 0.00091 34.6 7.5 115 741-891 48-163 (219)
451 2lz0_A Uncharacterized protein 43.1 37 0.0013 28.8 5.5 45 127-172 9-53 (100)
452 1cja_A Protein (actin-fragmin 40.2 56 0.0019 34.4 7.3 137 691-837 74-237 (342)
453 2lz0_A Uncharacterized protein 32.7 1.3E+02 0.0044 25.4 7.3 38 301-339 14-51 (100)
454 3ox7_P MH027; urokinase-type p 23.3 18 0.00062 20.4 0.1 9 56-64 6-14 (23)
455 2x6h_A GH13170P, VPS34, phosph 21.3 1E+03 0.035 27.7 14.5 45 785-836 529-575 (696)
456 3ls8_A Phosphatidylinositol 3- 21.1 5.4E+02 0.018 29.6 11.8 46 784-836 454-501 (614)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-85 Score=812.18 Aligned_cols=597 Identities=35% Similarity=0.532 Sum_probs=491.5
Q ss_pred cccccccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCceeeeEEeCCCceeeeecCCCCcccc---CC-----------
Q 001922 20 SSAASLVNDFHVLVALKQGFENPEPALISWNSSNPSSVCSWAGICCSRDRVASLDLTDLNLCGS---VP----------- 85 (995)
Q Consensus 20 ~~~~~~~~~~~~Ll~~k~~~~~~~~~l~~W~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~~~---~~----------- 85 (995)
+++++...|++|||+||+++.||. .+++|+.+ ++||+|.||+|+.++|++|||++.++.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~~--~~~C~w~gv~C~~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~ 81 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLPDKN-LLPDWSSN--KNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLES 81 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCSCTT-SSTTCCTT--SCGGGSTTEEEETTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCE
T ss_pred ccccCCHHHHHHHHHHHhhCCCcc-cccCCCCC--CCCcCCcceEECCCcEEEEECCCCCcCCccCccChhHhccCcccc
Confidence 445556789999999999999998 99999854 57999999999989999999999999887 44
Q ss_pred ------------ccccCCCCCCeEeccCCcccCcc----ccCcccccceeccccccccCCCcccc-cccccccccccccc
Q 001922 86 ------------AQILRLDKLTNLSLAGNNFTGSI----EIGNLSSLQFLNISNNQFSGGLDWNY-SSLVNLEVFDAYNN 148 (995)
Q Consensus 86 ------------~~~~~l~~L~~L~L~~n~l~~~~----~~~~l~~L~~L~Ls~N~i~~~~~~~~-~~l~~L~~L~Ls~n 148 (995)
+.|+.+++|++|+|++|.++|.+ .++++++|++|+|++|.+++..+..+ .++++|++|++++|
T Consensus 82 l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n 161 (768)
T 3rgz_A 82 LFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSAN 161 (768)
T ss_dssp EECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSS
T ss_pred cCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCC
Confidence 46778899999999999998733 57888999999999998887777655 66777777777777
Q ss_pred cccccCCcc---c----------------------cCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCc
Q 001922 149 NFTALLPVG---I----------------------LKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIP 203 (995)
Q Consensus 149 ~i~~~~p~~---~----------------------~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~ 203 (995)
++++..|.. + ..+++|++|+|++|.+++.+|. ++.+++|++|+|++|++++.+|
T Consensus 162 ~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~ 240 (768)
T 3rgz_A 162 SISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFS 240 (768)
T ss_dssp CCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHH
T ss_pred ccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCccc
Confidence 776655443 2 3456666666666666665665 7777777777777777777777
Q ss_pred ccccchhhhhhhhcccccccc---------------------CCCCcccCCC-CcccEEECcCCCCCCccCccccCcccc
Q 001922 204 GELGNLTNLREIYLGYYNVFE---------------------GGIPREVGKL-VNLVHLDLSSCELDGQIPHEIGNLKLL 261 (995)
Q Consensus 204 ~~l~~l~~L~~L~L~~n~~~~---------------------~~~p~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L 261 (995)
..++++++|++|++++|.+.. +.+|..+..+ ++|++|+|++|++++.+|..|+.+++|
T Consensus 241 ~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L 320 (768)
T 3rgz_A 241 RAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLL 320 (768)
T ss_dssp HHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTC
T ss_pred HHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCc
Confidence 777777777777777655431 2344444443 666666666666666666666666666
Q ss_pred CccccccccccCCCCcc-ccCcCCCCeEeccCCcCcCcCCccccccC-CCCEEEccCCcCCCCCCccccC--CCCcceEE
Q 001922 262 DTVFLHINLLSGSIPKQ-LGNLTNLVNLDLSNNALTGEIPYSFINLR-QLKLFNLFMNRLHGSIPDYLAD--LPNLETLG 337 (995)
Q Consensus 262 ~~L~l~~N~l~~~~p~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~--l~~L~~L~ 337 (995)
++|++++|++++.+|.. +.++++|++|++++|.+++.+|..+.+++ +|+.|++++|++++.+|..+.. +++|++|+
T Consensus 321 ~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~ 400 (768)
T 3rgz_A 321 ESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELY 400 (768)
T ss_dssp CEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEE
T ss_pred cEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEE
Confidence 66666666666555544 66666666666666666666666666665 6777777777776666666655 67888888
Q ss_pred eccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCC
Q 001922 338 LWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNG 417 (995)
Q Consensus 338 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 417 (995)
+++|++++.+|..++.+++|++|+|++|++++.+|..++.+++|+.|++++|.+.+.+|..+..+++|++|++++|++.+
T Consensus 401 L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 480 (768)
T 3rgz_A 401 LQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTG 480 (768)
T ss_dssp CCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCS
T ss_pred CCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccC
Confidence 88888888889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCC
Q 001922 418 SIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPS 497 (995)
Q Consensus 418 ~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 497 (995)
.+|..+..+++|+.+++++|++++.+|.. +..+++|++|+|++|+++|.+|..+.++++|+.|+|++|+++|.+|..
T Consensus 481 ~~p~~l~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 481 EIPSGLSNCTNLNWISLSNNRLTGEIPKW---IGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGG---GGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred cCCHHHhcCCCCCEEEccCCccCCcCChH---HhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 99999999999999999999999888864 345788999999999999999999999999999999999998877754
Q ss_pred c----------------------------------------------------------------------cchhhhccc
Q 001922 498 I----------------------------------------------------------------------GELRQVLKL 507 (995)
Q Consensus 498 ~----------------------------------------------------------------------~~l~~L~~L 507 (995)
+ +.+++|+.|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 3 335678999
Q ss_pred cccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCC
Q 001922 508 DLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 508 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 587 (995)
||++|+++|.+|.+++.+++|++|+|++|+++|.+|.+|+++++|+.|||++|+++|.+|..++.+++|+.||+|+|+|+
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCcccccccCCCCccCCCCCCCCCCCCCCc
Q 001922 588 GKLPESGQFTVFNASSFAGNPQLCGTLLNNPCNVAPI 624 (995)
Q Consensus 588 g~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~c~~~~~ 624 (995)
|.||+.+++.+++..+|.|||++||.|++ +|.....
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~~~ 753 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPSNA 753 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSCC-
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCCcc
Confidence 99999999999999999999999999998 8986643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=1.4e-65 Score=637.37 Aligned_cols=494 Identities=34% Similarity=0.521 Sum_probs=352.5
Q ss_pred ccCCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCcee
Q 001922 88 ILRLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYL 167 (995)
Q Consensus 88 ~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L 167 (995)
+.++++|++|++++|.+++..++..+++|++|+|++|.+++.+|. +.++++|++|++++|++++.+|..+..+++|++|
T Consensus 174 ~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L 252 (768)
T 3rgz_A 174 SDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLL 252 (768)
T ss_dssp TTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEE
T ss_pred hccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEE
Confidence 334444444444444444444456667777777777777766665 7777777777777777777777777777777777
Q ss_pred eccCccccccCCccccCCCCCceeeccCCcccccCcccccch-hhhhhhhccccccccCCCCcccCCCCcccEEECcCCC
Q 001922 168 DLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNL-TNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCE 246 (995)
Q Consensus 168 ~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l-~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~ 246 (995)
+|++|.+++.+|.. .+++|++|+|++|++++.+|..+..+ ++|++|++++|.+ .+.+|..++.+++|++|++++|+
T Consensus 253 ~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l-~~~~p~~~~~l~~L~~L~L~~n~ 329 (768)
T 3rgz_A 253 NISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHF-YGAVPPFFGSCSLLESLALSSNN 329 (768)
T ss_dssp ECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEE-EECCCGGGGGCTTCCEEECCSSE
T ss_pred ECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcC-CCccchHHhcCCCccEEECCCCc
Confidence 77777776655543 56666666666666666666666654 7777777775443 34566667777777777777777
Q ss_pred CCCccCcc-ccCccccCccccccccccCCCCccccCcC-CCCeEeccCCcCcCcCCccccc--cCCCCEEEccCCcCCCC
Q 001922 247 LDGQIPHE-IGNLKLLDTVFLHINLLSGSIPKQLGNLT-NLVNLDLSNNALTGEIPYSFIN--LRQLKLFNLFMNRLHGS 322 (995)
Q Consensus 247 l~~~~~~~-~~~l~~L~~L~l~~N~l~~~~p~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~--l~~L~~L~L~~N~l~~~ 322 (995)
+++.+|.. +..+++|++|++++|++++.+|..+.+++ +|++|++++|.+++.+|..+.. +++|+.|++++|++++.
T Consensus 330 l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~ 409 (768)
T 3rgz_A 330 FSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGK 409 (768)
T ss_dssp EEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEE
T ss_pred ccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccc
Confidence 76666654 66777777777777777766666666665 6666666666666666655554 55666666666666666
Q ss_pred CCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccC
Q 001922 323 IPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGAC 402 (995)
Q Consensus 323 ~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 402 (995)
+|..+..+++|++|+|++|++++.+|..++.+++|++|+|++|++++.+|..+..+++|+.|++++|++.+.+|..+.++
T Consensus 410 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 489 (768)
T 3rgz_A 410 IPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNC 489 (768)
T ss_dssp CCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGC
T ss_pred cCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcC
Confidence 66666666666666666666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCc----------
Q 001922 403 YSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPF---------- 472 (995)
Q Consensus 403 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~---------- 472 (995)
++|++|++++|++.+.+|.++..+++|+.+++++|+++|.+|.. ...+++|++|++++|+++|.+|.
T Consensus 490 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~ 566 (768)
T 3rgz_A 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAE---LGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIA 566 (768)
T ss_dssp TTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGG---GGGCTTCCEEECCSSEEESBCCGGGGTTTTCBC
T ss_pred CCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHH---HcCCCCCCEEECCCCccCCcCChHHhcccchhh
Confidence 66666666666666666666666666666666666666655543 23345566666666666655554
Q ss_pred ------------------------------------------------------------cccCCCCCcEEEcCCCcccC
Q 001922 473 ------------------------------------------------------------SLSNFSSLQILLLSGNQFSG 492 (995)
Q Consensus 473 ------------------------------------------------------------~~~~l~~L~~L~Ls~N~l~~ 492 (995)
.+.++++|+.|||++|+++|
T Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g 646 (768)
T 3rgz_A 567 ANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSG 646 (768)
T ss_dssp CSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBS
T ss_pred hhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccc
Confidence 45556789999999999999
Q ss_pred CCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCccccc
Q 001922 493 PIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGS 572 (995)
Q Consensus 493 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~ 572 (995)
.+|..++.+++|+.|+|++|+++|.+|..|+.+++|++|||++|+++|.+|.++.++++|++|||++|+|+|.+|.. +.
T Consensus 647 ~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~-~~ 725 (768)
T 3rgz_A 647 YIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEM-GQ 725 (768)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSS-SS
T ss_pred cCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCc-hh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999964 45
Q ss_pred CCcccEEeccCCC-CCCC
Q 001922 573 MKSLTIADFSFND-FSGK 589 (995)
Q Consensus 573 l~~L~~l~ls~N~-l~g~ 589 (995)
+.++....+.+|+ |+|.
T Consensus 726 ~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 726 FETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp GGGSCGGGGCSCTEEEST
T ss_pred hccCCHHHhcCCchhcCC
Confidence 6666666788886 7775
No 3
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6.8e-60 Score=581.16 Aligned_cols=553 Identities=21% Similarity=0.180 Sum_probs=479.2
Q ss_pred ceeeeEEeCC-----------CceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccc
Q 001922 58 CSWAGICCSR-----------DRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNN 124 (995)
Q Consensus 58 C~w~gv~C~~-----------~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N 124 (995)
|.++.|.|+. .+++.|||+++++++..+..|.++++|++|+|++|.+++.. .++++++|++|+|++|
T Consensus 4 ~~~~~~~cs~~~L~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 4 VSHEVADCSHLKLTQVPDDLPTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp CBSSEEECCSSCCSSCCSCSCTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred eECCeeECCCCCccccccccCCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 5556677753 36899999999999877778999999999999999999854 5889999999999999
Q ss_pred cccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcc
Q 001922 125 QFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPG 204 (995)
Q Consensus 125 ~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~ 204 (995)
.++++++..|.++++|++|++++|+++++.|..|+++++|++|+|++|.+++..|..++.+++|++|++++|++++..+.
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 163 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSE 163 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHH
Confidence 99998888999999999999999999998889999999999999999999998899999999999999999999988887
Q ss_pred ccc--chhhhhhhhccccccccCCCCcccCCC---------------------------CcccEEECcCCCCCCccCccc
Q 001922 205 ELG--NLTNLREIYLGYYNVFEGGIPREVGKL---------------------------VNLVHLDLSSCELDGQIPHEI 255 (995)
Q Consensus 205 ~l~--~l~~L~~L~L~~n~~~~~~~p~~~~~l---------------------------~~L~~L~Ls~n~l~~~~~~~~ 255 (995)
.++ .+++|++|++++|.+. +..|..+..+ ++|+.|++++|.+++..|..+
T Consensus 164 ~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 164 ELDIFANSSLKKLELSSNQIK-EFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHGGGTTCEESEEECTTCCCC-CBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HhhccccccccEEECCCCccc-ccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 765 4589999999977553 4455555433 567888899999998888899
Q ss_pred cCccc--cCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCC-----CCCc---
Q 001922 256 GNLKL--LDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHG-----SIPD--- 325 (995)
Q Consensus 256 ~~l~~--L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p~--- 325 (995)
..++. |+.|++++|++++..|..|..+++|++|++++|.+++..|..|.++++|+.|++++|...+ .+|.
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 88865 9999999999998888899999999999999999999999999999999999999886554 2333
Q ss_pred -cccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceeccc--CCCcCcCC--CccceeeccccccCCCCCcccc
Q 001922 326 -YLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGT--IPTDLCSS--NQLRILILLKNFLFGPIPERLG 400 (995)
Q Consensus 326 -~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l--~~L~~L~l~~N~l~~~~p~~l~ 400 (995)
.|..+++|++|++++|++++..+..|..+++|++|++++|.+++. .+..+..+ ++|+.|++++|++.+..|..+.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 688899999999999999998888999999999999999985432 22334333 5899999999999999999999
Q ss_pred cCCCCcEEEecCCccCCCCC-CCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCccc--ccCCccccCC
Q 001922 401 ACYSLTRVRLGQNYLNGSIP-DGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLS--GPLPFSLSNF 477 (995)
Q Consensus 401 ~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~--~~~p~~~~~l 477 (995)
.+++|+.|++++|.+.+.+| ..|..+++|+.+++++|++.+..+.. +..+++|+.|++++|.++ +.+|..+.++
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~---~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNS---FALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTT---TTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred CCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhh---hhcCcccccchhccccccccccCCcccccC
Confidence 99999999999999988776 68889999999999999998765543 456789999999999987 5789999999
Q ss_pred CCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCC--------CCccCcccccceeeccCCcccCCCccccccc
Q 001922 478 SSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEI--------PPAIGYCNHLTYLDMSQNNLSGSIPPEISNV 549 (995)
Q Consensus 478 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--------p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l 549 (995)
++|+.|+|++|++++..|..|..+++|+.|+|++|++++.. +..++.+++|++|+|++|+++...+..|.++
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 99999999999999888888999999999999999998532 2348899999999999999994444568999
Q ss_pred cccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCC-C-CCcccccccCCCCccCCCCC
Q 001922 550 RILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPES-G-QFTVFNASSFAGNPQLCGTL 614 (995)
Q Consensus 550 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~-~~~~~~~~~~~~n~~~c~~~ 614 (995)
++|+.|+|++|+|++..+..+..+++|+.|++++|++++.+|.. + .+..+....+.||||.|++.
T Consensus 560 ~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 560 FELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred cCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 99999999999999877777899999999999999999987752 1 35667778899999999954
No 4
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=1.5e-58 Score=561.19 Aligned_cols=507 Identities=19% Similarity=0.263 Sum_probs=379.1
Q ss_pred cccccchHHHHHHHHHhCCCCC--------CCCCCCCCCCCCCCcee---eeEEeCC-CceeeeecCCCCccccCCcccc
Q 001922 22 AASLVNDFHVLVALKQGFENPE--------PALISWNSSNPSSVCSW---AGICCSR-DRVASLDLTDLNLCGSVPAQIL 89 (995)
Q Consensus 22 ~~~~~~~~~~Ll~~k~~~~~~~--------~~l~~W~~~~~~~~C~w---~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~ 89 (995)
++....|+.||.+||+++.++. +..++|+.+ ++||.| .||+|+. +||+.|+|++++++|.+|+.++
T Consensus 25 ~~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~--~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~ 102 (636)
T 4eco_A 25 TAEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNFN--KELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIG 102 (636)
T ss_dssp CCHHHHHHHHHHHHHHHTTGGGCCCCC------CCCCCS--SCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGG
T ss_pred hhhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCC--CCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHh
Confidence 3445679999999999976442 245589865 679999 9999965 6999999999999999999999
Q ss_pred CCCCCCeEeccCCccc------C------ccccCcccccceeccccccccCCCcccccc-cccccccccccccccccCCc
Q 001922 90 RLDKLTNLSLAGNNFT------G------SIEIGNLSSLQFLNISNNQFSGGLDWNYSS-LVNLEVFDAYNNNFTALLPV 156 (995)
Q Consensus 90 ~l~~L~~L~L~~n~l~------~------~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~Ls~n~i~~~~p~ 156 (995)
+|++|++|+|++|.+. | .++-..+..|+ +++++|.+.+.++..+.. +..+..+++....+..
T Consensus 103 ~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~---- 177 (636)
T 4eco_A 103 QLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKK---- 177 (636)
T ss_dssp GCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCC----
T ss_pred cCccceEEECcCCccccCCccccccccccCchHHHHHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCcccccccc----
Confidence 9999999999999872 2 11112266788 999999999888877763 3455555555443332
Q ss_pred cccCCCCCceeecc--CccccccCCccccCCCCCceeeccCCccccc-----------------Cccccc--chhhhhhh
Q 001922 157 GILKLEKLKYLDLG--GNYFFGKIPNSYGELQGLEYLSLAGNDLTGK-----------------IPGELG--NLTNLREI 215 (995)
Q Consensus 157 ~~~~l~~L~~L~L~--~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-----------------~~~~l~--~l~~L~~L 215 (995)
.....++.+.+. +|++++ +|..|+++++|++|+|++|++++. +|..++ ++++|++|
T Consensus 178 --~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L 254 (636)
T 4eco_A 178 --SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDV 254 (636)
T ss_dssp --CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred --ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEE
Confidence 122233333333 467776 777777777777777777777764 777777 77777777
Q ss_pred hccccccccCCCCcccCCCCcccEEECcCCC-CCC-ccCccccCc------cccCccccccccccCCCCc--cccCcCCC
Q 001922 216 YLGYYNVFEGGIPREVGKLVNLVHLDLSSCE-LDG-QIPHEIGNL------KLLDTVFLHINLLSGSIPK--QLGNLTNL 285 (995)
Q Consensus 216 ~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~-l~~-~~~~~~~~l------~~L~~L~l~~N~l~~~~p~--~l~~l~~L 285 (995)
+|++|++ .+.+|..++++++|++|++++|+ +++ .+|..++.+ ++|++|++++|+++ .+|. .++++++|
T Consensus 255 ~L~~n~l-~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L 332 (636)
T 4eco_A 255 EVYNCPN-LTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKL 332 (636)
T ss_dssp EEECCTT-CSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTC
T ss_pred EecCCcC-CccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCC
Confidence 7775443 45677788888888888888887 887 788887776 88888888888888 7777 88888889
Q ss_pred CeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCC-cceEEeccCcccccCCCcccCCC--CCCeEEe
Q 001922 286 VNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPN-LETLGLWQNNFTGVIPENLGQNG--KLQVLDL 362 (995)
Q Consensus 286 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~L 362 (995)
++|++++|.++|.+| .|..+++|+.|++++|+++ .+|..+..+++ |++|++++|+++ .+|..+..++ +|++|++
T Consensus 333 ~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~L 409 (636)
T 4eco_A 333 GMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDF 409 (636)
T ss_dssp CEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEEC
T ss_pred CEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEEC
Confidence 999999998888888 8888888999999999888 77888888888 999999999988 6787777655 8899999
Q ss_pred cCceecccCCCcCc-------CCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcc-cCCCCceeec
Q 001922 363 SSNKLTGTIPTDLC-------SSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFI-YLPGLNLAEL 434 (995)
Q Consensus 363 ~~N~l~~~~p~~~~-------~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~-~l~~L~~l~l 434 (995)
++|++++.+|..+. .+.+|+.|++++|.+....+..+..+++|++|++++|+++ .+|..+. ....
T Consensus 410 s~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~------ 482 (636)
T 4eco_A 410 SYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENE------ 482 (636)
T ss_dssp CSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTE------
T ss_pred cCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccc------
Confidence 99999888888887 7788999999999988554455666899999999999998 5554332 1110
Q ss_pred cCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCcccc--CCCCCcEEEcCCCcccCCCCCCccchhhhcccccccc
Q 001922 435 QSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLS--NFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRN 512 (995)
Q Consensus 435 ~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 512 (995)
....+++|++|+|++|+++ .+|..+. .+++|+.|+|++|+|++ +|..++.+++|+.|+|++|
T Consensus 483 --------------~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N 546 (636)
T 4eco_A 483 --------------NFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQ 546 (636)
T ss_dssp --------------ECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSC
T ss_pred --------------cccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCC
Confidence 0112347888999999998 6888776 89999999999999986 8888889999999999665
Q ss_pred ccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCC
Q 001922 513 SLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 513 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 587 (995)
+ ++++|++.+.+|.+++++++|++|+|++|++ +.+|..+. ++|+.||+++|++.
T Consensus 547 ~------------------~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~--~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 547 R------------------DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKIT--PNISVLDIKDNPNI 600 (636)
T ss_dssp B------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--TTCCEEECCSCTTC
T ss_pred c------------------ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHh--CcCCEEECcCCCCc
Confidence 4 4455555555555555555555555555555 44555444 45555555555444
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-56 Score=550.31 Aligned_cols=531 Identities=22% Similarity=0.209 Sum_probs=446.0
Q ss_pred eeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccccc
Q 001922 71 ASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNN 148 (995)
Q Consensus 71 ~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n 148 (995)
..+|+++++++ .+|..+. +++++|+|++|++++.. .+.++++|++|+|++|.+++..+..|.++++|++|+|++|
T Consensus 7 ~~~~cs~~~L~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 83 (680)
T 1ziw_A 7 EVADCSHLKLT-QVPDDLP--TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHN 83 (680)
T ss_dssp SEEECCSSCCS-SCCSCSC--TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSS
T ss_pred CeeECCCCCcc-ccccccC--CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCC
Confidence 45899999996 5787665 79999999999999855 5999999999999999999999999999999999999999
Q ss_pred cccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCC
Q 001922 149 NFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIP 228 (995)
Q Consensus 149 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p 228 (995)
+++++.+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+++..|..++++++|++|++++|.+. +..+
T Consensus 84 ~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~ 162 (680)
T 1ziw_A 84 ELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQ-ALKS 162 (680)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCC-CBCH
T ss_pred ccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCccc-ccCH
Confidence 999977778999999999999999999877889999999999999999999999999999999999999977654 3344
Q ss_pred cccC--CCCcccEEECcCCCCCCccCccccCc---------------------------cccCccccccccccCCCCccc
Q 001922 229 REVG--KLVNLVHLDLSSCELDGQIPHEIGNL---------------------------KLLDTVFLHINLLSGSIPKQL 279 (995)
Q Consensus 229 ~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l---------------------------~~L~~L~l~~N~l~~~~p~~l 279 (995)
..+. .+++|++|++++|.+++..|..+..+ ++|+.|++++|.+++..|..+
T Consensus 163 ~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~ 242 (680)
T 1ziw_A 163 EELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTF 242 (680)
T ss_dssp HHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTT
T ss_pred HHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHh
Confidence 4443 56899999999999998888877655 456777778888887778888
Q ss_pred cCcCC--CCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccc-----cCC----
Q 001922 280 GNLTN--LVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTG-----VIP---- 348 (995)
Q Consensus 280 ~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-----~~p---- 348 (995)
.+++. |+.|+|++|.+++..|..|..+++|+.|++++|++.+..|..|..+++|+.|++++|...+ .+|
T Consensus 243 ~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~ 322 (680)
T 1ziw_A 243 LGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDD 322 (680)
T ss_dssp GGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECT
T ss_pred hccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccCh
Confidence 87765 8899999988888888888888889999999888888888888888889999888876543 223
Q ss_pred CcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC--CcccccC--CCCcEEEecCCccCCCCCCCcc
Q 001922 349 ENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI--PERLGAC--YSLTRVRLGQNYLNGSIPDGFI 424 (995)
Q Consensus 349 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~--p~~l~~l--~~L~~L~l~~N~l~~~~p~~~~ 424 (995)
..|..+++|++|++++|++++..|..|..+++|+.|++++|.+.... +..+..+ .+|+.|++++|++.+..|..|.
T Consensus 323 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~ 402 (680)
T 1ziw_A 323 FSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFS 402 (680)
T ss_dssp TTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTT
T ss_pred hhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhh
Confidence 26778888999999999998888888888899999999988754322 2233332 5789999999999999999999
Q ss_pred cCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCccc--CCCCCCccchh
Q 001922 425 YLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFS--GPIPPSIGELR 502 (995)
Q Consensus 425 ~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~ 502 (995)
.+++|+.+++++|.+++.+|.. .+..+++|++|++++|++++..+..+..+++|+.|++++|.++ +.+|..++.++
T Consensus 403 ~l~~L~~L~L~~N~l~~~~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~ 480 (680)
T 1ziw_A 403 WLGHLEVLDLGLNEIGQELTGQ--EWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLR 480 (680)
T ss_dssp TCTTCCEEECCSSCCEEECCSG--GGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCT
T ss_pred CCCCCCEEeCCCCcCccccCcc--cccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCC
Confidence 9999999999999998876643 2456788999999999999888889999999999999999987 57888999999
Q ss_pred hhccccccccccCCCCCCccCcccccceeeccCCcccCCCc--------cccccccccCeEeccccccccccCcccccCC
Q 001922 503 QVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIP--------PEISNVRILNYLNLSRNHLNQNIPKSIGSMK 574 (995)
Q Consensus 503 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip--------~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 574 (995)
+|+.|+|++|++++..|..|..+++|++|+|++|++++..+ ..+.++++|++|+|++|+++...+..|..++
T Consensus 481 ~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~ 560 (680)
T 1ziw_A 481 NLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLF 560 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred CCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHccccc
Confidence 99999999999998777789999999999999999985322 2378899999999999999865455789999
Q ss_pred cccEEeccCCCCCCCCCCC-CCCcccccccCCCC
Q 001922 575 SLTIADFSFNDFSGKLPES-GQFTVFNASSFAGN 607 (995)
Q Consensus 575 ~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 607 (995)
+|+.|++++|++++.+|.. ..+..+....+.+|
T Consensus 561 ~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 561 ELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp TCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 9999999999999766543 34555666666666
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.1e-57 Score=548.03 Aligned_cols=490 Identities=19% Similarity=0.164 Sum_probs=252.6
Q ss_pred CCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeecc
Q 001922 93 KLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLG 170 (995)
Q Consensus 93 ~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~ 170 (995)
.+++|+|++|++++.. .|.++++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 4555555555555432 35555555555555555555555555555555555555555555555555555555555555
Q ss_pred CccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCccc--EEECcCCCCC
Q 001922 171 GNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLV--HLDLSSCELD 248 (995)
Q Consensus 171 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~--~L~Ls~n~l~ 248 (995)
+|.+++..|..|+.+++|++|+|++|++++.....+..+++|++|++++|.+. +..|..+..+++|+ .|++++|.++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~l~L~l~~n~l~ 192 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH-YLSKEDMSSLQQATNLSLNLNGNDIA 192 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC-EECHHHHHTTTTCCSEEEECTTCCCC
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc-ccChhhhhhhcccceeEEecCCCccC
Confidence 55555444555555555555555555555433333333555555555544332 22344455555555 5555566555
Q ss_pred CccCccccCccccCcccccccccc--------------------------CCCCccccCcC--CCCeEeccCCcCcCcCC
Q 001922 249 GQIPHEIGNLKLLDTVFLHINLLS--------------------------GSIPKQLGNLT--NLVNLDLSNNALTGEIP 300 (995)
Q Consensus 249 ~~~~~~~~~l~~L~~L~l~~N~l~--------------------------~~~p~~l~~l~--~L~~L~Ls~N~l~~~~p 300 (995)
+..|..+.. ..|+.|++++|... ...+..+..+. +|+.|++++|.+++..+
T Consensus 193 ~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~ 271 (606)
T 3t6q_A 193 GIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISS 271 (606)
T ss_dssp EECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCT
T ss_pred ccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCH
Confidence 544444332 35555555554310 11112222222 45566666666655555
Q ss_pred ccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCc-CcCCC
Q 001922 301 YSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTD-LCSSN 379 (995)
Q Consensus 301 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~ 379 (995)
..|.++++|+.|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|++|++++|.+.+.+|.. +..++
T Consensus 272 ~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~ 350 (606)
T 3t6q_A 272 NTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLE 350 (606)
T ss_dssp TTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCT
T ss_pred HHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccC
Confidence 55555666666666666655 45555555566666666666665555555555666666666666555444433 55555
Q ss_pred ccceeeccccccCCCC--CcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCc
Q 001922 380 QLRILILLKNFLFGPI--PERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLG 457 (995)
Q Consensus 380 ~L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~ 457 (995)
+|+.|++++|.+.+.. |..+..+++|++|++++|++.+..|..|..+++|+.+++++|++.+..+.. .+..+++|+
T Consensus 351 ~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~--~~~~l~~L~ 428 (606)
T 3t6q_A 351 NLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQS--PFQNLHLLK 428 (606)
T ss_dssp TCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCC--TTTTCTTCC
T ss_pred cCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccch--hhhCcccCC
Confidence 5555555555555443 455555555555555555555555555555555555555555554433221 122334444
Q ss_pred EEEcCCCcccccCCccccCCCCCcEEEcCCCcccC---CCCCCccchhhhccccccccccCCCCCCccCcccccceeecc
Q 001922 458 QLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSG---PIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMS 534 (995)
Q Consensus 458 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 534 (995)
+|++++|.+++..|..+..+++|+.|+|++|++++ ..+..+..+++|+.|+|++|++++..|..|+.+++|++|+|+
T Consensus 429 ~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 508 (606)
T 3t6q_A 429 VLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLS 508 (606)
T ss_dssp EEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred EEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECC
Confidence 55555554444444444444455555555554443 112334444444444444444444444444444444444444
Q ss_pred CCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCC
Q 001922 535 QNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 535 ~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 588 (995)
+|++++.+|..+.+++.| +|+|++|++++.+|..+..+++|+.+++++|++.+
T Consensus 509 ~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 561 (606)
T 3t6q_A 509 HNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDC 561 (606)
T ss_dssp SSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEEC
T ss_pred CCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccc
Confidence 444444444444444444 44444444444444444444444444444444443
No 7
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=2.5e-57 Score=557.91 Aligned_cols=499 Identities=20% Similarity=0.279 Sum_probs=370.0
Q ss_pred ccccccchHHHHHHHHHhCCCCCCCCCCCCCCC---CCCC--cee------------eeEEeCC-CceeeeecCCCCccc
Q 001922 21 SAASLVNDFHVLVALKQGFENPEPALISWNSSN---PSSV--CSW------------AGICCSR-DRVASLDLTDLNLCG 82 (995)
Q Consensus 21 ~~~~~~~~~~~Ll~~k~~~~~~~~~l~~W~~~~---~~~~--C~w------------~gv~C~~-~~v~~l~l~~~~l~~ 82 (995)
.+++...|++||++||+++.+| +|+.++ ..++ |.| .||+|+. +||+.|+|+++++.|
T Consensus 263 ~~~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G 337 (876)
T 4ecn_A 263 ETAEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKG 337 (876)
T ss_dssp CCCHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEE
T ss_pred ccccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCC
Confidence 3455667999999999999887 897654 1234 999 9999984 899999999999999
Q ss_pred cCCccccCCCCCCeEec-cCCcccCccccCcccc------cc--eeccc----------ccccc-----------CCCcc
Q 001922 83 SVPAQILRLDKLTNLSL-AGNNFTGSIEIGNLSS------LQ--FLNIS----------NNQFS-----------GGLDW 132 (995)
Q Consensus 83 ~~~~~~~~l~~L~~L~L-~~n~l~~~~~~~~l~~------L~--~L~Ls----------~N~i~-----------~~~~~ 132 (995)
.+|+.|++|++|++|+| ++|.++|...+..... ++ .+... ...++ ...+.
T Consensus 338 ~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i 417 (876)
T 4ecn_A 338 RVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPI 417 (876)
T ss_dssp EECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCC
T ss_pred cCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccc
Confidence 99999999999999999 8899887643331111 00 00000 00000 00011
Q ss_pred ccccccccccccccc--ccccccCCccccCCCCCceeeccCccccc-----------------cCCcccc--CCCCCcee
Q 001922 133 NYSSLVNLEVFDAYN--NNFTALLPVGILKLEKLKYLDLGGNYFFG-----------------KIPNSYG--ELQGLEYL 191 (995)
Q Consensus 133 ~~~~l~~L~~L~Ls~--n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~l~--~l~~L~~L 191 (995)
.......++.+.+.. |++++ +|..|+++++|++|+|++|.+++ .+|..++ ++++|++|
T Consensus 418 ~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L 496 (876)
T 4ecn_A 418 KKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDV 496 (876)
T ss_dssp CCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEE
T ss_pred ccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEE
Confidence 112223444444443 67777 67777777777777777777776 3677766 77777777
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccC-CCCcccCCCC-------cccEEECcCCCCCCccCc--cccCcccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEG-GIPREVGKLV-------NLVHLDLSSCELDGQIPH--EIGNLKLL 261 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~-~~p~~~~~l~-------~L~~L~Ls~n~l~~~~~~--~~~~l~~L 261 (995)
+|++|++.+.+|..|+++++|++|+|++|+.+.+ .+|..++.++ +|++|+|++|+++ .+|. .++++++|
T Consensus 497 ~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L 575 (876)
T 4ecn_A 497 ELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKL 575 (876)
T ss_dssp EEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTC
T ss_pred ECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCC
Confidence 7777777777777777777777777776654555 5665554444 8888888888888 7777 78888888
Q ss_pred CccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCC-CCEEEccCCcCCCCCCccccCCCC--cceEEe
Q 001922 262 DTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQ-LKLFNLFMNRLHGSIPDYLADLPN--LETLGL 338 (995)
Q Consensus 262 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-L~~L~L~~N~l~~~~p~~~~~l~~--L~~L~L 338 (995)
+.|++++|+++ .+| .|+.+++|+.|+|++|.++ .+|..+.++++ |+.|+|++|+++ .+|..+..++. |+.|+|
T Consensus 576 ~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~L 651 (876)
T 4ecn_A 576 GLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDF 651 (876)
T ss_dssp CEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEEC
T ss_pred CEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEEC
Confidence 88888888888 677 7888888888888888888 77778888888 888888888888 67777776654 888888
Q ss_pred ccCcccccCCCcc---c--CCCCCCeEEecCceecccCCCcCc-CCCccceeeccccccCCCCCccccc--------CCC
Q 001922 339 WQNNFTGVIPENL---G--QNGKLQVLDLSSNKLTGTIPTDLC-SSNQLRILILLKNFLFGPIPERLGA--------CYS 404 (995)
Q Consensus 339 ~~N~l~~~~p~~~---~--~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~l~~--------l~~ 404 (995)
++|++++.+|... . .+++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.+. .+|..+.. +++
T Consensus 652 s~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~ 729 (876)
T 4ecn_A 652 SYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYL 729 (876)
T ss_dssp CSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGG
T ss_pred cCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCC
Confidence 8888887665322 2 3347888888888888 5666544 7788888888888887 45554333 338
Q ss_pred CcEEEecCCccCCCCCCCcc--cCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcE
Q 001922 405 LTRVRLGQNYLNGSIPDGFI--YLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQI 482 (995)
Q Consensus 405 L~~L~l~~N~l~~~~p~~~~--~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 482 (995)
|+.|+|++|+++ .+|..+. .++ +|+.|+|++|++++ +|..+.++++|+.
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~---------------------------~L~~L~Ls~N~L~~-lp~~l~~L~~L~~ 780 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLP---------------------------YLSNMDVSYNCFSS-FPTQPLNSSQLKA 780 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCT---------------------------TCCEEECCSSCCSS-CCCGGGGCTTCCE
T ss_pred ccEEECCCCCCc-cchHHhhhccCC---------------------------CcCEEEeCCCCCCc-cchhhhcCCCCCE
Confidence 999999999998 6777664 443 46666677777765 6777777778888
Q ss_pred EEcCC------CcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEe
Q 001922 483 LLLSG------NQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLN 556 (995)
Q Consensus 483 L~Ls~------N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ 556 (995)
|+|++ |++.+.+|..++.+++|+.|+|++|+| +.+|..+. ++|+.|||++|++...-+..+.....+..+.
T Consensus 781 L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~i~~~~~~~~~~~~~~~ 857 (876)
T 4ecn_A 781 FGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNISIDVTSVCPYIEAGMYV 857 (876)
T ss_dssp EECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCEEECGGGHHHHHTTCCE
T ss_pred EECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCccChHHccccccchhee
Confidence 87765 888889999999999999999999999 68998876 6999999999999876677787777888899
Q ss_pred cccccccc
Q 001922 557 LSRNHLNQ 564 (995)
Q Consensus 557 L~~N~l~~ 564 (995)
|.+|++..
T Consensus 858 L~~n~~~~ 865 (876)
T 4ecn_A 858 LLYDKTQD 865 (876)
T ss_dssp EECCTTSE
T ss_pred ecCCCccc
Confidence 99988753
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.8e-57 Score=548.26 Aligned_cols=493 Identities=18% Similarity=0.167 Sum_probs=443.1
Q ss_pred cccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeec
Q 001922 114 SSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSL 193 (995)
Q Consensus 114 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 193 (995)
.++++|+|++|.|+++.+..|.++++|++|+|++|+++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 37899999999999999999999999999999999999999999999999999999999999899999999999999999
Q ss_pred cCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccC--ccccccccc
Q 001922 194 AGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLD--TVFLHINLL 271 (995)
Q Consensus 194 s~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~--~L~l~~N~l 271 (995)
++|++++..+..++++++|++|++++|.+.....|..+ .+++|++|++++|.+++..+..++.+++|+ .|++++|.+
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGF-PTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTC-CCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCccccc-CCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 99999988789999999999999998877654445544 499999999999999988889999999999 899999999
Q ss_pred cCCCCccccCcCCCCeEeccCCcCc--------------------------CcCCccccccC--CCCEEEccCCcCCCCC
Q 001922 272 SGSIPKQLGNLTNLVNLDLSNNALT--------------------------GEIPYSFINLR--QLKLFNLFMNRLHGSI 323 (995)
Q Consensus 272 ~~~~p~~l~~l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~l~--~L~~L~L~~N~l~~~~ 323 (995)
++..|..+.. .+|+.|++++|... ...+..|.++. +|+.|++++|++++..
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred CccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 9887776654 68999999987510 12233344443 7899999999999888
Q ss_pred CccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCc-ccccC
Q 001922 324 PDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPE-RLGAC 402 (995)
Q Consensus 324 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~l~~l 402 (995)
+..|..+++|++|++++|+++ .+|..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+.+|. .+..+
T Consensus 271 ~~~~~~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l 349 (606)
T 3t6q_A 271 SNTFHCFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENL 349 (606)
T ss_dssp TTTTTTCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTC
T ss_pred HHHhccccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhcc
Confidence 888999999999999999999 7888999999999999999999988899999999999999999999877765 49999
Q ss_pred CCCcEEEecCCccCCCC--CCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCcc-ccCCCC
Q 001922 403 YSLTRVRLGQNYLNGSI--PDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFS-LSNFSS 479 (995)
Q Consensus 403 ~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~-~~~l~~ 479 (995)
++|++|++++|.+.+.. |..+..+++|+.+++++|.+.+..|.. +..+++|++|++++|++++..|.. +.++++
T Consensus 350 ~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 426 (606)
T 3t6q_A 350 ENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEA---FKECPQLELLDLAFTRLKVKDAQSPFQNLHL 426 (606)
T ss_dssp TTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTT---TTTCTTCSEEECTTCCEECCTTCCTTTTCTT
T ss_pred CcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHH---hcCCccCCeEECCCCcCCCcccchhhhCccc
Confidence 99999999999999877 889999999999999999998776653 456789999999999999876654 899999
Q ss_pred CcEEEcCCCcccCCCCCCccchhhhccccccccccCCC---CCCccCcccccceeeccCCcccCCCccccccccccCeEe
Q 001922 480 LQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGE---IPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLN 556 (995)
Q Consensus 480 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~ 556 (995)
|+.|++++|++++..|..++.+++|+.|+|++|.+++. .+..++.+++|++|+|++|++++..|..|.++++|++|+
T Consensus 427 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEE
Confidence 99999999999999999999999999999999999862 346799999999999999999988899999999999999
Q ss_pred ccccccccccCcccccCCcccEEeccCCCCCCCCCCC-CCCcccccccCCCCccCCCC
Q 001922 557 LSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPES-GQFTVFNASSFAGNPQLCGT 613 (995)
Q Consensus 557 L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~~c~~ 613 (995)
|++|++++.+|..+..++.| .|++++|++++.+|.. +.+..+....+.|||+.|.+
T Consensus 507 Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 507 LSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp CCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred CCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 99999999999999999999 9999999999888853 34566778889999999973
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1e-55 Score=554.43 Aligned_cols=522 Identities=22% Similarity=0.205 Sum_probs=450.3
Q ss_pred eecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCC-Cccccccccccccccccccc
Q 001922 73 LDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGG-LDWNYSSLVNLEVFDAYNNN 149 (995)
Q Consensus 73 l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~n~ 149 (995)
.|.++++++ .+|. -.++|++|+|++|.|++.. .+.++++|++|+|++|.+.+. .+..|.++++|++|+|++|+
T Consensus 9 ~dcs~~~L~-~vP~---lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~ 84 (844)
T 3j0a_A 9 AFYRFCNLT-QVPQ---VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSK 84 (844)
T ss_dssp EEESCCCSS-CCCS---SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCC
T ss_pred EEccCCCCC-CCCC---CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCc
Confidence 455667776 4666 4579999999999999743 699999999999999965544 48899999999999999999
Q ss_pred ccccCCccccCCCCCceeeccCccccccCCcc--ccCCCCCceeeccCCcccccCc-ccccchhhhhhhhccccccccCC
Q 001922 150 FTALLPVGILKLEKLKYLDLGGNYFFGKIPNS--YGELQGLEYLSLAGNDLTGKIP-GELGNLTNLREIYLGYYNVFEGG 226 (995)
Q Consensus 150 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~L~~L~L~~n~~~~~~ 226 (995)
|+++.|..|.++++|++|+|++|.+++.+|.. |+.+++|++|+|++|.+++..+ ..|+++++|++|+|++|.+ .+.
T Consensus 85 l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i-~~~ 163 (844)
T 3j0a_A 85 IYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQI-FLV 163 (844)
T ss_dssp CCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCC-CCC
T ss_pred CcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcC-Cee
Confidence 99999999999999999999999999877765 9999999999999999998765 5799999999999997655 445
Q ss_pred CCcccCCC--CcccEEECcCCCCCCccCccccCccc------cCccccccccccCCCCccccCc---CCCCeEeccC---
Q 001922 227 IPREVGKL--VNLVHLDLSSCELDGQIPHEIGNLKL------LDTVFLHINLLSGSIPKQLGNL---TNLVNLDLSN--- 292 (995)
Q Consensus 227 ~p~~~~~l--~~L~~L~Ls~n~l~~~~~~~~~~l~~------L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~Ls~--- 292 (995)
.+..+..+ ++|+.|+++.|.+.+..|..++.+.+ |+.|++++|.+++..+..+... ++++.|++++
T Consensus 164 ~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~ 243 (844)
T 3j0a_A 164 CEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIM 243 (844)
T ss_dssp CSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCC
T ss_pred CHHHcccccCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccc
Confidence 67777777 89999999999999988888777665 9999999999998888776543 5788888773
Q ss_pred ------CcCcCcCCcccccc--CCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecC
Q 001922 293 ------NALTGEIPYSFINL--RQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSS 364 (995)
Q Consensus 293 ------N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 364 (995)
|.+.+..+..|.++ ++|+.|++++|.+.+..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++
T Consensus 244 ~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~ 323 (844)
T 3j0a_A 244 GAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSY 323 (844)
T ss_dssp BCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEES
T ss_pred cccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCC
Confidence 44454555666665 6899999999999988899999999999999999999999999999999999999999
Q ss_pred ceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCC
Q 001922 365 NKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLP 444 (995)
Q Consensus 365 N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~ 444 (995)
|++++..|..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+++.. .+++|+.+++++|+++ .+|
T Consensus 324 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~-~l~ 397 (844)
T 3j0a_A 324 NLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV-TLP 397 (844)
T ss_dssp CCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC-CCC
T ss_pred CCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc-ccc
Confidence 9999888999999999999999999999988889999999999999999998532 3788999999999998 344
Q ss_pred CCCCCCCCCCCCcEEEcCCCcccccC-CccccCCCCCcEEEcCCCcccCCCCC-CccchhhhccccccccccC-----CC
Q 001922 445 ENGNSSSNPDRLGQLNLSNNLLSGPL-PFSLSNFSSLQILLLSGNQFSGPIPP-SIGELRQVLKLDLSRNSLS-----GE 517 (995)
Q Consensus 445 ~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~ 517 (995)
.. ...++.|++++|++++.. +..+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +.
T Consensus 398 ~~------~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~ 471 (844)
T 3j0a_A 398 KI------NLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETEL 471 (844)
T ss_dssp CC------CTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCC
T ss_pred cc------ccccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCcccccccccc
Confidence 32 357899999999999642 23456899999999999999965543 4567899999999999997 44
Q ss_pred CCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCc
Q 001922 518 IPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFT 597 (995)
Q Consensus 518 ~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~ 597 (995)
.|..|..+++|++|+|++|+|++.+|..|.++++|+.|+|++|+|++..|..+. ++|+.|||++|+++|.+|.. +.
T Consensus 472 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~ 547 (844)
T 3j0a_A 472 CWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FV 547 (844)
T ss_dssp CSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CS
T ss_pred chhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hC
Confidence 556789999999999999999998888899999999999999999987777666 89999999999999999964 66
Q ss_pred ccccccCCCCccCCCCCC
Q 001922 598 VFNASSFAGNPQLCGTLL 615 (995)
Q Consensus 598 ~~~~~~~~~n~~~c~~~~ 615 (995)
.+....+.|||+.|++++
T Consensus 548 ~L~~l~l~~Np~~C~c~~ 565 (844)
T 3j0a_A 548 SLSVLDITHNKFICECEL 565 (844)
T ss_dssp SCCEEEEEEECCCCSSSC
T ss_pred CcCEEEecCCCccccccc
Confidence 777888999999997654
No 10
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.7e-56 Score=541.62 Aligned_cols=527 Identities=21% Similarity=0.175 Sum_probs=415.9
Q ss_pred eeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCccccccccccccccccccc
Q 001922 72 SLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNN 149 (995)
Q Consensus 72 ~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~ 149 (995)
.++.++.+++ .+|..+. +++++|+|++|++++.. .+.++++|++|+|++|.++++.+..|.++++|++|+|++|+
T Consensus 15 ~~~c~~~~l~-~ip~~~~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~ 91 (606)
T 3vq2_A 15 TYQCMDQKLS-KVPDDIP--SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNP 91 (606)
T ss_dssp EEECTTSCCS-SCCTTSC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCC
T ss_pred ceEccCCCcc-cCCCCCC--CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCc
Confidence 3456666665 5676654 78999999999999754 58999999999999999999999999999999999999999
Q ss_pred ccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccc-cCcccccchhhhhhhhccccccccCCCC
Q 001922 150 FTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTG-KIPGELGNLTNLREIYLGYYNVFEGGIP 228 (995)
Q Consensus 150 i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~n~~~~~~~p 228 (995)
++++.|..|+++++|++|+|++|.+++..+..|+++++|++|+|++|++++ .+|..|+++++|++|++++|++.. ..|
T Consensus 92 l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~-~~~ 170 (606)
T 3vq2_A 92 IQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQT-ITV 170 (606)
T ss_dssp CCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCE-ECT
T ss_pred ccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCccee-cCh
Confidence 999889999999999999999999987777889999999999999999986 569999999999999999776543 456
Q ss_pred cccCCCCccc----EEECcCCCCCCccCccccCccccCcccccccccc-CCCCccccCcCCCCeEeccCCcCcC------
Q 001922 229 REVGKLVNLV----HLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLS-GSIPKQLGNLTNLVNLDLSNNALTG------ 297 (995)
Q Consensus 229 ~~~~~l~~L~----~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~L~Ls~N~l~~------ 297 (995)
..++.+++|+ +|++++|.+++..+..+... +|+.|++++|.++ +..|..+.++++|+.+++..+.+.+
T Consensus 171 ~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~ 249 (606)
T 3vq2_A 171 NDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEI 249 (606)
T ss_dssp TTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSC
T ss_pred hhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccc
Confidence 6677776665 89999999996666665554 8999999999886 4567788899999988886554432
Q ss_pred cCCccccccC--CCCEEEc-cCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCc
Q 001922 298 EIPYSFINLR--QLKLFNL-FMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTD 374 (995)
Q Consensus 298 ~~p~~~~~l~--~L~~L~L-~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 374 (995)
..+..+.++. .++.+++ ..|.+.+.+|. +..+++|+.|++++|.++ .+| .+..+++|++|++++|++ +.+| .
T Consensus 250 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~ 324 (606)
T 3vq2_A 250 FEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-T 324 (606)
T ss_dssp CCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-C
T ss_pred cChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-c
Confidence 1222233332 3455566 66777777776 778888888888888886 455 677788888888888888 5777 4
Q ss_pred CcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCC--CCCCcccCCCCceeeccCccccCCCCCCCCCCCC
Q 001922 375 LCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGS--IPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSN 452 (995)
Q Consensus 375 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~--~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~ 452 (995)
+ .+++|+.|++++|...+.+ .+..+++|+.|++++|.+++. +|..+..+++|+.+++++|.+++. | ..+..
T Consensus 325 ~-~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~-~---~~~~~ 397 (606)
T 3vq2_A 325 L-DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIM-S---ANFMG 397 (606)
T ss_dssp C-CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEE-C---CCCTT
T ss_pred C-CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccc-h---hhccC
Confidence 4 7888888888888654433 566788888888888888766 377778888888888888887753 3 23455
Q ss_pred CCCCcEEEcCCCcccccCC-ccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCC-CCCCccCcccccce
Q 001922 453 PDRLGQLNLSNNLLSGPLP-FSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSG-EIPPAIGYCNHLTY 530 (995)
Q Consensus 453 ~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~ 530 (995)
+++|++|++++|++++..| ..+.++++|+.|++++|++++..|..++.+++|+.|+|++|.+++ .+|..++.+++|++
T Consensus 398 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 477 (606)
T 3vq2_A 398 LEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTF 477 (606)
T ss_dssp CTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCE
T ss_pred CCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCE
Confidence 6788888888888887776 577888888888888888888888888888888888888888886 36888888888888
Q ss_pred eeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCc-ccccccCCCCcc
Q 001922 531 LDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFT-VFNASSFAGNPQ 609 (995)
Q Consensus 531 L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~-~~~~~~~~~n~~ 609 (995)
|+|++|++++.+|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|+++..++....+. .+....+.|||+
T Consensus 478 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~ 557 (606)
T 3vq2_A 478 LDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSV 557 (606)
T ss_dssp EECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCC
T ss_pred EECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCc
Confidence 8888888888778888888888888888888888888888888888888888888884333333333 355667788888
Q ss_pred CCCCCC
Q 001922 610 LCGTLL 615 (995)
Q Consensus 610 ~c~~~~ 615 (995)
.|++++
T Consensus 558 ~c~c~~ 563 (606)
T 3vq2_A 558 ACICEH 563 (606)
T ss_dssp CCSSTT
T ss_pred ccCCcc
Confidence 887543
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.7e-55 Score=532.87 Aligned_cols=511 Identities=19% Similarity=0.146 Sum_probs=450.8
Q ss_pred CceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCccccccccccccccc
Q 001922 68 DRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDA 145 (995)
Q Consensus 68 ~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~L 145 (995)
.+++.|||+++++++..+..|.++++|++|+|++|++++.. .|.++++|++|+|++|++++..|..|.++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 36889999999999988889999999999999999999754 5899999999999999999999999999999999999
Q ss_pred ccccccccCCccccCCCCCceeeccCccccc-cCCccccCCCCCceeeccCCcccccCcccccchhhhh----hhhcccc
Q 001922 146 YNNNFTALLPVGILKLEKLKYLDLGGNYFFG-KIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLR----EIYLGYY 220 (995)
Q Consensus 146 s~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~----~L~L~~n 220 (995)
++|.++++.+..|+++++|++|+|++|.+++ .+|..|+++++|++|+|++|++++..|..++.+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 9999999888999999999999999999986 5799999999999999999999999999999999887 6999987
Q ss_pred ccccCCCCcccCCCCcccEEECcCCCCC-CccCccccCccccCccccccccccC------CCCccccCcC--CCCeEec-
Q 001922 221 NVFEGGIPREVGKLVNLVHLDLSSCELD-GQIPHEIGNLKLLDTVFLHINLLSG------SIPKQLGNLT--NLVNLDL- 290 (995)
Q Consensus 221 ~~~~~~~p~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~------~~p~~l~~l~--~L~~L~L- 290 (995)
.+.. ++.......+|++|++++|.++ +..|..+.+++.|+.+.+..+.+.+ ..+..+..+. .++.+++
T Consensus 192 ~l~~--~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 192 PIDF--IQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCE--ECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred Ccce--eCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 7653 4555555559999999999997 4667888999999988886655432 1222333333 4667777
Q ss_pred cCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceeccc
Q 001922 291 SNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGT 370 (995)
Q Consensus 291 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 370 (995)
..|.+++..|. |..+++|+.|++++|.+. .+| .+..+++|+.|++++|++ +.+| .+ .+++|++|++++|+..+.
T Consensus 270 ~~~~~~~~~~~-~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l-~~lp-~~-~l~~L~~L~l~~n~~~~~ 343 (606)
T 3vq2_A 270 YTNDFSDDIVK-FHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQL-KQFP-TL-DLPFLKSLTLTMNKGSIS 343 (606)
T ss_dssp CCTTCCGGGGS-CGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCC-SSCC-CC-CCSSCCEEEEESCSSCEE
T ss_pred ccccccccccc-cccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccC-cccc-cC-CCCccceeeccCCcCccc
Confidence 78889988887 999999999999999997 456 888999999999999999 5778 45 899999999999976655
Q ss_pred CCCcCcCCCccceeeccccccCCC--CCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCC
Q 001922 371 IPTDLCSSNQLRILILLKNFLFGP--IPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGN 448 (995)
Q Consensus 371 ~p~~~~~l~~L~~L~l~~N~l~~~--~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~ 448 (995)
+ .+..+++|+.|++++|.+.+. +|..+..+++|++|++++|.+.+ +|..+..+++|+.+++++|++.+..|..
T Consensus 344 ~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~-- 418 (606)
T 3vq2_A 344 F--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFS-- 418 (606)
T ss_dssp C--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTT--
T ss_pred h--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChh--
Confidence 4 677899999999999999876 48889999999999999999986 6688999999999999999999876532
Q ss_pred CCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccC-CCCCCccchhhhccccccccccCCCCCCccCcccc
Q 001922 449 SSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSG-PIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNH 527 (995)
Q Consensus 449 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 527 (995)
.+..+++|++|++++|++++..|..+.++++|+.|+|++|++++ .+|..++.+++|+.|+|++|++++..|..++.+++
T Consensus 419 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~ 498 (606)
T 3vq2_A 419 AFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHR 498 (606)
T ss_dssp TTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred hhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhccccc
Confidence 34567899999999999999999999999999999999999997 47999999999999999999999988999999999
Q ss_pred cceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCC-cccEEeccCCCCCCCCCC
Q 001922 528 LTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMK-SLTIADFSFNDFSGKLPE 592 (995)
Q Consensus 528 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~l~ls~N~l~g~~p~ 592 (995)
|++|+|++|++++.+|..+.++++|++|+|++|+|+ .+|..+..++ +|+.+++++|++.+..+.
T Consensus 499 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 499 LQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred CCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 999999999999988999999999999999999998 4888899997 699999999999986663
No 12
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=8.6e-54 Score=537.05 Aligned_cols=542 Identities=22% Similarity=0.190 Sum_probs=456.7
Q ss_pred ceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc---ccCcccccceeccccccccCCCcccc
Q 001922 58 CSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI---EIGNLSSLQFLNISNNQFSGGLDWNY 134 (995)
Q Consensus 58 C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~---~~~~l~~L~~L~Ls~N~i~~~~~~~~ 134 (995)
|.|..|-+-..+++.|||+++.+++..|..|.++++|++|+|++|.+.+.+ .+.++++|++|+|++|.|++..|..|
T Consensus 14 ~~L~~vP~lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~ 93 (844)
T 3j0a_A 14 CNLTQVPQVLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAF 93 (844)
T ss_dssp CCSSCCCSSCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSS
T ss_pred CCCCCCCCCCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHc
Confidence 567777664468999999999999999999999999999999999776543 59999999999999999999999999
Q ss_pred cccccccccccccccccccCCcc--ccCCCCCceeeccCccccccCC-ccccCCCCCceeeccCCcccccCcccccch--
Q 001922 135 SSLVNLEVFDAYNNNFTALLPVG--ILKLEKLKYLDLGGNYFFGKIP-NSYGELQGLEYLSLAGNDLTGKIPGELGNL-- 209 (995)
Q Consensus 135 ~~l~~L~~L~Ls~n~i~~~~p~~--~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l-- 209 (995)
.++++|++|+|++|.+++..|.. |.++++|++|+|++|.+++..+ ..|+++++|++|+|++|.+++..+..++.+
T Consensus 94 ~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~ 173 (844)
T 3j0a_A 94 QGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQG 173 (844)
T ss_dssp CSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHH
T ss_pred cCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccC
Confidence 99999999999999999866655 9999999999999999987655 579999999999999999999999999988
Q ss_pred hhhhhhhccccccccCCCCcccCCCCc------ccEEECcCCCCCCccCccccCc---cccCcccccc---------ccc
Q 001922 210 TNLREIYLGYYNVFEGGIPREVGKLVN------LVHLDLSSCELDGQIPHEIGNL---KLLDTVFLHI---------NLL 271 (995)
Q Consensus 210 ~~L~~L~L~~n~~~~~~~p~~~~~l~~------L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~l~~---------N~l 271 (995)
++|+.|+++.|.+. +..|..+..+.+ |++|++++|.+++..+..+... ..++.|.++. |.+
T Consensus 174 ~~L~~L~L~~n~l~-~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l 252 (844)
T 3j0a_A 174 KTLSFFSLAANSLY-SRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNI 252 (844)
T ss_dssp CSSCCCEECCSBSC-CCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSS
T ss_pred CccceEECCCCccc-cccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccccccccccccc
Confidence 89999999976654 456666666555 9999999999998888877653 5667777663 334
Q ss_pred cCCCCccccCc--CCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCC
Q 001922 272 SGSIPKQLGNL--TNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPE 349 (995)
Q Consensus 272 ~~~~p~~l~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 349 (995)
.+..+..|.++ ++|+.|+|++|.+++..|..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..|.
T Consensus 253 ~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 332 (844)
T 3j0a_A 253 KDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSS 332 (844)
T ss_dssp TTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSC
T ss_pred CCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHH
Confidence 43444455554 6899999999999999999999999999999999999998899999999999999999999988899
Q ss_pred cccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCC
Q 001922 350 NLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGL 429 (995)
Q Consensus 350 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 429 (995)
.|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+. ..+++|+.|++++|++. .+|.. ...+
T Consensus 333 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~-~l~~~---~~~l 403 (844)
T 3j0a_A 333 NFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLV-TLPKI---NLTA 403 (844)
T ss_dssp SCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCC-CCCCC---CTTC
T ss_pred HhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcc-----cCCCCcchhccCCCCcc-ccccc---cccc
Confidence 999999999999999999988888899999999999999998653 33789999999999998 44544 4678
Q ss_pred ceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCc-cccCCCCCcEEEcCCCccc-----CCCCCCccchhh
Q 001922 430 NLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPF-SLSNFSSLQILLLSGNQFS-----GPIPPSIGELRQ 503 (995)
Q Consensus 430 ~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~ 503 (995)
+.++++.|++++.-.. .....+++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..+++
T Consensus 404 ~~L~ls~N~l~~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 404 NLIHLSENRLENLDIL--YFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp CEEECCSCCCCSSTTH--HHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ceeecccCccccCchh--hhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 9999999999864211 1123568899999999999965544 4567899999999999997 455677899999
Q ss_pred hccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccC
Q 001922 504 VLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSF 583 (995)
Q Consensus 504 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~ 583 (995)
|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..+. ++|+.|+|++|+|++.+|..+ .+|+.+++++
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~ 556 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVF---VSLSVLDITH 556 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEE
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHh---CCcCEEEecC
Confidence 99999999999998889999999999999999999976666665 899999999999999988776 4789999999
Q ss_pred CCCCCCCCCCCCCcccccccCCCCccCCCCCCCCCCC
Q 001922 584 NDFSGKLPESGQFTVFNASSFAGNPQLCGTLLNNPCN 620 (995)
Q Consensus 584 N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~c~ 620 (995)
|++.+..+.. .|......+|..+||.+....|.
T Consensus 557 Np~~C~c~~~----~f~~~~~~~~~~~~~~~~~~~C~ 589 (844)
T 3j0a_A 557 NKFICECELS----TFINWLNHTNVTIAGPPADIYCV 589 (844)
T ss_dssp ECCCCSSSCC----SHHHHHHHTTTTTCCCGGGCCCS
T ss_pred CCcccccccH----HHHHHHHhcCcccccccccCccC
Confidence 9998766532 22211123455555555444554
No 13
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-51 Score=494.29 Aligned_cols=505 Identities=20% Similarity=0.162 Sum_probs=415.7
Q ss_pred ecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCccccccccccccccccccccc
Q 001922 74 DLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFT 151 (995)
Q Consensus 74 ~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~ 151 (995)
+.++.+++ .+|..+. +++++|+|++|++++.. .+.++++|++|+|++|+++++.+..|.++++|++|++++|+++
T Consensus 13 ~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~ 89 (570)
T 2z63_A 13 QCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQ 89 (570)
T ss_dssp ECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCC
T ss_pred EeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCC
Confidence 33344444 4666543 57999999999998754 6899999999999999999988899999999999999999999
Q ss_pred ccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccc-cCcccccchhhhhhhhccccccccCCCCcc
Q 001922 152 ALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTG-KIPGELGNLTNLREIYLGYYNVFEGGIPRE 230 (995)
Q Consensus 152 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~ 230 (995)
++.|..|.++++|++|++++|++++..+..|+.+++|++|+|++|.+++ .+|..|+++++|++|++++|.+. +..+..
T Consensus 90 ~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~-~~~~~~ 168 (570)
T 2z63_A 90 SLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTD 168 (570)
T ss_dssp EECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC-EECGGG
T ss_pred ccCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc-eecHHH
Confidence 9888999999999999999999986666679999999999999999987 46888999999999999876654 345667
Q ss_pred cCCCCcc----cEEECcCCCCCCccCccccCccccCccccccccccC-CCCccccCcCCCCeEeccCCcC------cCcC
Q 001922 231 VGKLVNL----VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSG-SIPKQLGNLTNLVNLDLSNNAL------TGEI 299 (995)
Q Consensus 231 ~~~l~~L----~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l------~~~~ 299 (995)
+..+++| +.|++++|.+++..|..+..+ +|+.|++++|.... .++..+..+++++.+.+..+.+ ....
T Consensus 169 ~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~ 247 (570)
T 2z63_A 169 LRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFD 247 (570)
T ss_dssp GHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECC
T ss_pred ccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcc
Confidence 7777777 889999999988777777766 78888888875432 2445566777777666543322 2223
Q ss_pred CccccccCC--CCEEEccCC-cCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCc
Q 001922 300 PYSFINLRQ--LKLFNLFMN-RLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLC 376 (995)
Q Consensus 300 p~~~~~l~~--L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 376 (995)
...|.++.+ ++.+++++| .+.+..|..+..+++|+.|++++|.++ .+|..+..+ +|++|++++|.+. .+|. .
T Consensus 248 ~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~ 322 (570)
T 2z63_A 248 KSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--L 322 (570)
T ss_dssp TTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--C
T ss_pred hhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--c
Confidence 334444443 466777777 777788888888899999999999988 578788888 8999999999988 6665 4
Q ss_pred CCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCC--CCCcccCCCCceeeccCccccCCCCCCCCCCCCCC
Q 001922 377 SSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSI--PDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPD 454 (995)
Q Consensus 377 ~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~--p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~ 454 (995)
.+++|+.|++++|.+.+..+. ..+++|++|++++|.+.+.. |..+..+++|+.+++++|.+.+..+. +..++
T Consensus 323 ~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~----~~~l~ 396 (570)
T 2z63_A 323 KLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN----FLGLE 396 (570)
T ss_dssp BCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE----EETCT
T ss_pred cccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc----ccccC
Confidence 678899999999988776665 77889999999999988654 67788889999999999988765432 34567
Q ss_pred CCcEEEcCCCcccccCC-ccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccC-CCCCCccCcccccceee
Q 001922 455 RLGQLNLSNNLLSGPLP-FSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLS-GEIPPAIGYCNHLTYLD 532 (995)
Q Consensus 455 ~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~ 532 (995)
+|++|++++|++++..| ..+.++++|+.|++++|++++..|..+..+++|+.|+|++|.++ +.+|..++.+++|++|+
T Consensus 397 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~ 476 (570)
T 2z63_A 397 QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLD 476 (570)
T ss_dssp TCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEE
T ss_pred CCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEE
Confidence 89999999999997766 57889999999999999999889999999999999999999997 57899999999999999
Q ss_pred ccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCC
Q 001922 533 MSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESG 594 (995)
Q Consensus 533 Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~ 594 (995)
|++|++++..|..+.++++|++|+|++|++++.+|..+..+++|+.+++++|+++|.+|...
T Consensus 477 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 477 LSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp CTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcchH
Confidence 99999998889999999999999999999999888889999999999999999999988643
No 14
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=8.6e-52 Score=450.78 Aligned_cols=258 Identities=22% Similarity=0.356 Sum_probs=216.7
Q ss_pred hccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.++..+.||+|+||+||+|++. +++.||||++.........+.|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 4566788999999999999862 4688999999765555566789999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC
Q 001922 761 VYEYMRNGSLGEALHGKK--------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE 826 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~ 826 (995)
|||||++|+|.+++.... ...+++..+.+++.|||+||+|||+++ ||||||||+|||+++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCccccceEECCCCC
Confidence 999999999999996432 246899999999999999999999877 999999999999999999
Q ss_pred eEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHH
Q 001922 827 AHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKR 905 (995)
Q Consensus 827 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~ 905 (995)
+||+|||+|+.+...+.........||++|||||++.++.|+.++|||||||++|||+| |+.||..... .+....
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~----~~~~~~ 259 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN----QDVVEM 259 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----HHHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----HHHHHH
Confidence 99999999987755444444456789999999999999999999999999999999999 8999965432 222222
Q ss_pred HhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 906 ATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 906 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
+..+ .....|.+++..+.+++.+||+.||++||||+||++.|+++.
T Consensus 260 i~~~-----------~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 260 IRNR-----------QVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp HHTT-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHcC-----------CCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 2222 122245567788999999999999999999999999999864
No 15
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.6e-52 Score=451.73 Aligned_cols=262 Identities=24% Similarity=0.405 Sum_probs=216.6
Q ss_pred hhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcce
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNL 759 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 759 (995)
++|...+.||+|+||+||+|++. +++.||||++... .....++|.+|++++++++|||||+++++|.+++..|
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-SDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCC-ChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 46778899999999999999763 4788999999543 3344667999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeE
Q 001922 760 LVYEYMRNGSLGEALHGK-----------KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAH 828 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~-----------~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vk 828 (995)
+|||||++|+|.++++.. ....+++..+.+++.||++||+|||+++ ||||||||+|||+++++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCccCHhhEEECCCCcEE
Confidence 999999999999999642 2357999999999999999999999877 99999999999999999999
Q ss_pred EeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHh
Q 001922 829 VADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRAT 907 (995)
Q Consensus 829 l~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~ 907 (995)
|+|||+|+...............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+....+.
T Consensus 169 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~----~~~~~~i~ 244 (299)
T 4asz_A 169 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN----NEVIECIT 244 (299)
T ss_dssp ECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH----HHHHHHHH
T ss_pred ECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH----HHHHHHHH
Confidence 999999987654443333345679999999999999999999999999999999999 9999975432 22222222
Q ss_pred cCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 908 NGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 908 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.+ .....|..++..+.+++.+||+.||++|||++||++.|+++.+..+
T Consensus 245 ~~-----------~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~~p 292 (299)
T 4asz_A 245 QG-----------RVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKASP 292 (299)
T ss_dssp HT-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSC
T ss_pred cC-----------CCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhcCC
Confidence 22 1122345567789999999999999999999999999998765443
No 16
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.8e-51 Score=452.56 Aligned_cols=262 Identities=25% Similarity=0.406 Sum_probs=209.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcce
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNL 759 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 759 (995)
+.|...++||+|+||+||+|++. +++.||||++.. ......++|.+|++++++++|||||+++++|.+++..|
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE-ASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC-CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 34666788999999999999864 478899999954 23444677999999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCC-------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC
Q 001922 760 LVYEYMRNGSLGEALHGKK-------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE 826 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~~-------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~ 826 (995)
+|||||++|+|.++++... ...+++..+.+|+.|||.||+|||+.+ ||||||||+|||+++++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~---iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLH---FVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHhhEEECCCCc
Confidence 9999999999999997432 346899999999999999999999877 999999999999999999
Q ss_pred eEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHH
Q 001922 827 AHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKR 905 (995)
Q Consensus 827 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~ 905 (995)
+||+|||+|+.+.............||+.|||||++.+..|+.++|||||||++|||+| |+.||..... .+....
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~----~~~~~~ 272 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN----TEAIDC 272 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH----HHHHHH
T ss_pred EEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH----HHHHHH
Confidence 99999999997655444444456789999999999999999999999999999999999 9999975432 222222
Q ss_pred HhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 906 ATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 906 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
+..+. ....|..++..+.+++.+||+.||++|||++||+++|+.+.+..+
T Consensus 273 i~~g~-----------~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~pp 322 (329)
T 4aoj_A 273 ITQGR-----------ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQAPP 322 (329)
T ss_dssp HHHTC-----------CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHSCC
T ss_pred HHcCC-----------CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhCCc
Confidence 22211 112344567789999999999999999999999999999876543
No 17
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3e-51 Score=444.16 Aligned_cols=263 Identities=30% Similarity=0.430 Sum_probs=208.5
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++++..+.||+|+||+||+|++.. .||||+++... .....+.|.+|++++++++|||||++++++.+ +..|+||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 356678899999999999998743 69999985432 23345679999999999999999999998864 568999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
|++|+|.++++.. ...+++..+.+|+.|||.||+|||+++ ||||||||+|||+++++.+||+|||+|+........
T Consensus 113 ~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~~---IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 113 CEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred CCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCccCHHHEEECCCCcEEEeeccCceecccCCcc
Confidence 9999999999743 456999999999999999999999877 999999999999999999999999999876544444
Q ss_pred ccccccccCccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 845 ECMSAIAGSYGYIAPEYAYT---LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......+||+.|||||++.+ +.|+.++|||||||++|||+||+.||.+......+... +..+ ...+.
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~---~~~~-------~~~p~ 258 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM---VGRG-------YASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHH---HHTT-------CCCCC
T ss_pred eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHH---HhcC-------CCCCC
Confidence 44456789999999999864 46899999999999999999999999764433222221 1111 12233
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
....+.+++..+.+++.+||+.||++||||+||++.|+.++..-
T Consensus 259 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp STTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred cccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 33445567788999999999999999999999999998876543
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8.7e-51 Score=487.22 Aligned_cols=488 Identities=20% Similarity=0.222 Sum_probs=319.7
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccc
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNY 134 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~ 134 (995)
.|.|.|| |+ +++++++ .+|+.+. ++|++|+|++|++++.. .+.++++|++|+|++|++++..+..|
T Consensus 3 ~C~~~~~-c~--------~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~ 70 (549)
T 2z81_A 3 SCDASGV-CD--------GRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAF 70 (549)
T ss_dssp EECTTSE-EE--------CTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTT
T ss_pred cCCCCce-EE--------CCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhc
Confidence 5999998 74 4455555 5777654 68899999999888743 58888888888888888888888888
Q ss_pred cccccccccccccccccccCCccccCCCCCceeeccCccccc-cCCccccCCCCCceeeccCCcccccC-cccccchhhh
Q 001922 135 SSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFG-KIPNSYGELQGLEYLSLAGNDLTGKI-PGELGNLTNL 212 (995)
Q Consensus 135 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~-~~~l~~l~~L 212 (995)
.++++|++|++++|++++..|..|+++++|++|+|++|.+++ ..|..|+.+++|++|++++|++.+.+ +..|+++++|
T Consensus 71 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L 150 (549)
T 2z81_A 71 YSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSL 150 (549)
T ss_dssp TTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEE
T ss_pred cccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhccccc
Confidence 888888888888888888777778888888888888888875 35667888888888888888743333 3566666666
Q ss_pred hhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCC--C-ccccCcCCCCeEe
Q 001922 213 REIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSI--P-KQLGNLTNLVNLD 289 (995)
Q Consensus 213 ~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~--p-~~l~~l~~L~~L~ 289 (995)
++|++++|.+ .+..|..+..+++|++|+++.|.+.......+..+++|++|++++|++++.. | .....+++|+.|+
T Consensus 151 ~~L~L~~n~l-~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~ 229 (549)
T 2z81_A 151 NELEIKALSL-RNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLA 229 (549)
T ss_dssp EEEEEEETTC-CEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEE
T ss_pred CeeeccCCcc-cccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhccccee
Confidence 6666665443 3345566666666666666666655322222234566666666666665431 1 1223345566666
Q ss_pred ccCCcCcCcCCc----cccccCCCCEEEccCCcCCCCC------CccccCCCCcceEEeccCccccc-----CCCcccCC
Q 001922 290 LSNNALTGEIPY----SFINLRQLKLFNLFMNRLHGSI------PDYLADLPNLETLGLWQNNFTGV-----IPENLGQN 354 (995)
Q Consensus 290 Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~L~~N~l~~~-----~p~~~~~l 354 (995)
+++|.+++..+. .+..+++|+.+++++|.+.+.. ...+..+++|+.|+++++.+... ++..+...
T Consensus 230 l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~ 309 (549)
T 2z81_A 230 FRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLL 309 (549)
T ss_dssp EESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHS
T ss_pred ccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhc
Confidence 666655543322 2234455555555555554321 11233444555555555544321 01111222
Q ss_pred CCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCC---CCcccCCCCce
Q 001922 355 GKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIP---DGFIYLPGLNL 431 (995)
Q Consensus 355 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p---~~~~~l~~L~~ 431 (995)
.+|+.|++++|+++ .+|..+. ..+++|++|++++|++.+.+| ..+..+++|+.
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~-----------------------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~ 365 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFS-----------------------QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQT 365 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHH-----------------------HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCE
T ss_pred ccceEEEeccCccc-cCCHHHH-----------------------hcCccccEEEccCCccccccccchhhhhccccCcE
Confidence 34444444444444 3333331 345555555555555554432 22444555555
Q ss_pred eeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccc
Q 001922 432 AELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSR 511 (995)
Q Consensus 432 l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 511 (995)
+++++|++++..+. ......+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|..+. ++|+.|+|++
T Consensus 366 L~Ls~N~l~~~~~~-~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~ 440 (549)
T 2z81_A 366 LVLSQNHLRSMQKT-GEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSN 440 (549)
T ss_dssp EECTTSCCCCHHHH-HHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCS
T ss_pred EEccCCcccccccc-hhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCC
Confidence 55555555432110 001234567888888999888 67888888999999999999988 4554442 5899999999
Q ss_pred cccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 512 NSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 512 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
|+|++.+ +.+++|++|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+..+++|+.|++++|++.+..|
T Consensus 441 N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 441 NNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp SCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred CChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 9998642 57889999999999998 7886 5788999999999999999888889999999999999999988777
Q ss_pred C
Q 001922 592 E 592 (995)
Q Consensus 592 ~ 592 (995)
.
T Consensus 515 ~ 515 (549)
T 2z81_A 515 R 515 (549)
T ss_dssp H
T ss_pred c
Confidence 3
No 19
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-49 Score=479.49 Aligned_cols=488 Identities=22% Similarity=0.190 Sum_probs=419.8
Q ss_pred ceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccc
Q 001922 69 RVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAY 146 (995)
Q Consensus 69 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 146 (995)
+++.|||+++++++..+..|.++++|++|+|++|++++.. .+.++++|++|+|++|++++..+..|.++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 6889999999999888889999999999999999999754 58999999999999999999999999999999999999
Q ss_pred cccccccCCccccCCCCCceeeccCccccc-cCCccccCCCCCceeeccCCcccccCcccccchhhh----hhhhccccc
Q 001922 147 NNNFTALLPVGILKLEKLKYLDLGGNYFFG-KIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNL----REIYLGYYN 221 (995)
Q Consensus 147 ~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L----~~L~L~~n~ 221 (995)
+|+++++.+..|+++++|++|+|++|.+++ .+|..|+++++|++|++++|++++..+..++.+++| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 999999877789999999999999999987 479999999999999999999999889999999999 889999766
Q ss_pred cccCCCCcccCCCCcccEEECcCCCCCC-ccCccccCccccCcccccccccc------CCCCccccCcC--CCCeEeccC
Q 001922 222 VFEGGIPREVGKLVNLVHLDLSSCELDG-QIPHEIGNLKLLDTVFLHINLLS------GSIPKQLGNLT--NLVNLDLSN 292 (995)
Q Consensus 222 ~~~~~~p~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~------~~~p~~l~~l~--~L~~L~Ls~ 292 (995)
+. +..|..+..+ +|+.|++++|.... .++..+..++.++.+.+..+.+. ......+..+. .++.+++++
T Consensus 189 l~-~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 266 (570)
T 2z63_A 189 MN-FIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 266 (570)
T ss_dssp CC-EECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEE
T ss_pred ce-ecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhc
Confidence 54 3445555555 89999999986542 34555666666666555433222 12222333333 357788888
Q ss_pred C-cCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccC
Q 001922 293 N-ALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTI 371 (995)
Q Consensus 293 N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 371 (995)
| .+.+..|..|..+++|+.|++++|.++ .+|..+..+ +|+.|++++|.++ .+|. ..+++|++|++++|.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~ 341 (570)
T 2z63_A 267 LDYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAF 341 (570)
T ss_dssp TTEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBC
T ss_pred chhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-ccCc--ccccccCEEeCcCCcccccc
Confidence 8 788888999999999999999999998 588888888 9999999999998 5554 57889999999999988776
Q ss_pred CCcCcCCCccceeeccccccCCCC--CcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCC
Q 001922 372 PTDLCSSNQLRILILLKNFLFGPI--PERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNS 449 (995)
Q Consensus 372 p~~~~~l~~L~~L~l~~N~l~~~~--p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~ 449 (995)
+. ..+++|+.|++++|.+.+.. |..+..+++|+.|++++|.+.+..+. +..+++|+.+++++|.+.+..+.. .
T Consensus 342 ~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~--~ 416 (570)
T 2z63_A 342 SE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFS--V 416 (570)
T ss_dssp CC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSC--T
T ss_pred cc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchh--h
Confidence 65 77899999999999987654 77888999999999999999876655 889999999999999998765532 3
Q ss_pred CCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCccc-CCCCCCccchhhhccccccccccCCCCCCccCccccc
Q 001922 450 SSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFS-GPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHL 528 (995)
Q Consensus 450 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 528 (995)
+..+++|++|++++|++++..|..+.++++|+.|+|++|+++ +.+|..++.+++|+.|+|++|++++..|..++.+++|
T Consensus 417 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 496 (570)
T 2z63_A 417 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496 (570)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred hhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCC
Confidence 456789999999999999999999999999999999999998 6789999999999999999999998889999999999
Q ss_pred ceeeccCCcccCCCccccccccccCeEeccccccccccCc
Q 001922 529 TYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPK 568 (995)
Q Consensus 529 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~ 568 (995)
++|+|++|++++..|..+.++++|+.|+|++|++++..|.
T Consensus 497 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 497 QVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 9999999999988888899999999999999999987664
No 20
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.1e-50 Score=445.54 Aligned_cols=252 Identities=23% Similarity=0.326 Sum_probs=206.5
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||+||+|++ .+|+.||||++.... .....+.+.+|++++++++|||||++++++.+++..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 5789999999999999999976 469999999995433 23345678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
||+||+|.+++....+..+++..++.++.||+.||+|||+++ ||||||||+|||++.++.+||+|||+|+.+...
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~-- 178 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST-- 178 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CEETTCCGGGEEECTTCCEEECSTTEESCCCHH--
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCCEEEcccccceeecCC--
Confidence 999999999998666677899999999999999999999887 999999999999999999999999999875321
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......+||+.|||||++.+..|+.++||||+||++|||+||+.||... +..+....+... ...
T Consensus 179 ~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~----~~~~~~~~i~~~-----------~~~ 243 (350)
T 4b9d_A 179 VELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG----SMKNLVLKIISG-----------SFP 243 (350)
T ss_dssp HHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS----SHHHHHHHHHHT-----------CCC
T ss_pred cccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc----CHHHHHHHHHcC-----------CCC
Confidence 12234568999999999999999999999999999999999999999643 222222222222 112
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...+..+.+++.+||+.||++|||++|++++
T Consensus 244 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~h 277 (350)
T 4b9d_A 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEK 277 (350)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 2333456678999999999999999999999863
No 21
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=9.4e-50 Score=478.27 Aligned_cols=481 Identities=20% Similarity=0.198 Sum_probs=318.2
Q ss_pred EeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccc
Q 001922 97 LSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFG 176 (995)
Q Consensus 97 L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 176 (995)
.+.++|+++.... .-.++|++|+|++|++++..+..|.++++|++|++++|+++++.|..|.++++|++|+|++|++++
T Consensus 10 c~~~~~~l~~ip~-~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~ 88 (549)
T 2z81_A 10 CDGRSRSFTSIPS-GLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSS 88 (549)
T ss_dssp EECTTSCCSSCCS-CCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCS
T ss_pred EECCCCccccccc-cCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCc
Confidence 4555565554321 112556666666666665555556666666666666666666555556666666666666666655
Q ss_pred cCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccC-ccc
Q 001922 177 KIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIP-HEI 255 (995)
Q Consensus 177 ~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~-~~~ 255 (995)
..|..|+.+++|++|+|++|++++ ...|..+.++++|++|++++|.+.+.+| ..+
T Consensus 89 ~~~~~~~~l~~L~~L~Ls~n~l~~------------------------~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~ 144 (549)
T 2z81_A 89 LSSSWFGPLSSLKYLNLMGNPYQT------------------------LGVTSLFPNLTNLQTLRIGNVETFSEIRRIDF 144 (549)
T ss_dssp CCHHHHTTCTTCCEEECTTCCCSS------------------------SCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred cCHHHhccCCCCcEEECCCCcccc------------------------cchhhhhhccCCccEEECCCCccccccCHhhh
Confidence 444455566666666666665553 2233444445555555555555222222 345
Q ss_pred cCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCC--C-ccccCCCC
Q 001922 256 GNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSI--P-DYLADLPN 332 (995)
Q Consensus 256 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--p-~~~~~l~~ 332 (995)
..+++|++|++++|.+++..|..+..+++|++|++++|.+.......+..+++|+.|++++|++++.. | .....+++
T Consensus 145 ~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~ 224 (549)
T 2z81_A 145 AGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSP 224 (549)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCC
T ss_pred hcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhc
Confidence 55555555555555555555555555555555555555554222222234555555555555555431 1 12233556
Q ss_pred cceEEeccCcccccCC----CcccCCCCCCeEEecCceecccC------CCcCcCCCccceeeccccccCC-----CCCc
Q 001922 333 LETLGLWQNNFTGVIP----ENLGQNGKLQVLDLSSNKLTGTI------PTDLCSSNQLRILILLKNFLFG-----PIPE 397 (995)
Q Consensus 333 L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~l~~N~l~~-----~~p~ 397 (995)
|+.|++++|.+++..+ ..+..+++|+.|++++|.+.+.. ...+..+.+|+.|++.++.+.. .++.
T Consensus 225 L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~ 304 (549)
T 2z81_A 225 MKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLST 304 (549)
T ss_dssp CCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCH
T ss_pred ccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchh
Confidence 6666666666654332 22344556666666666665421 1223455666666666665432 2233
Q ss_pred ccccCCCCcEEEecCCccCCCCCCCc-ccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCC--ccc
Q 001922 398 RLGACYSLTRVRLGQNYLNGSIPDGF-IYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLP--FSL 474 (995)
Q Consensus 398 ~l~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p--~~~ 474 (995)
.+....+|++|++++|.+. .+|..+ ..+++|+.+++++|++++.+|........+++|++|+|++|++++..+ ..+
T Consensus 305 ~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 383 (549)
T 2z81_A 305 VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383 (549)
T ss_dssp HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHG
T ss_pred hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhh
Confidence 3445678999999999997 566665 579999999999999998765443445667899999999999986533 468
Q ss_pred cCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCe
Q 001922 475 SNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNY 554 (995)
Q Consensus 475 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 554 (995)
..+++|+.|+|++|+++ .+|..++.+++|+.|+|++|+++ .+|..+. ++|++|+|++|++++.+ ..+++|++
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECCCCChhhhc----ccCChhcE
Confidence 89999999999999999 78999999999999999999998 4665553 68999999999999743 57899999
Q ss_pred EeccccccccccCcccccCCcccEEeccCCCCCCCCCC-CCCCcccccccCCCCccCCCC
Q 001922 555 LNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPE-SGQFTVFNASSFAGNPQLCGT 613 (995)
Q Consensus 555 L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~~c~~ 613 (995)
|+|++|+|+ .+|. ...+++|+.|++++|++++.+|. .+.+..+....+.|||+.|.+
T Consensus 456 L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 513 (549)
T 2z81_A 456 LYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 513 (549)
T ss_dssp EECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCH
T ss_pred EECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCC
Confidence 999999998 5776 57899999999999999998886 356777788899999998873
No 22
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=8.1e-50 Score=484.45 Aligned_cols=460 Identities=20% Similarity=0.237 Sum_probs=323.6
Q ss_pred cccceeccccccccCCCcccccccccccccccccccccc------------cCCccccCCCCCceeeccCccccccCCcc
Q 001922 114 SSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTA------------LLPVGILKLEKLKYLDLGGNYFFGKIPNS 181 (995)
Q Consensus 114 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~------------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 181 (995)
.+++.|+|++|.++|.+|..++++++|++|+|++|.+.. .+|... +.+|+ +++++|.+.+.+|..
T Consensus 81 ~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~ 157 (636)
T 4eco_A 81 GRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPRED 157 (636)
T ss_dssp CCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGG
T ss_pred CCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhh
Confidence 467788888888887777777777777777777776521 122222 23344 555555555544444
Q ss_pred ccC-CCCCceeeccCCcccccCcccccchhhhhhhhccc-cccccCCCCcccCCCCcccEEECcCCCCCCc---------
Q 001922 182 YGE-LQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGY-YNVFEGGIPREVGKLVNLVHLDLSSCELDGQ--------- 250 (995)
Q Consensus 182 l~~-l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~-n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~--------- 250 (995)
+.. +..+..+++....+.. .....++.++++. +|.+.+ +|..++++++|++|+|++|.+++.
T Consensus 158 ~~~~~~~l~~~~l~~~~~~~------~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~ 230 (636)
T 4eco_A 158 FSDLIKDCINSDPQQKSIKK------SSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENE 230 (636)
T ss_dssp SCHHHHHHHHHCTTSCCCCC------CCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT
T ss_pred HHHHHHHHhhcCcccccccc------ccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCcccccccccccccc
Confidence 432 1222333333222221 1112333344432 344444 677777777777777777777764
Q ss_pred --------cCcccc--CccccCccccccccccCCCCccccCcCCCCeEeccCCc-CcC-cCCcccccc------CCCCEE
Q 001922 251 --------IPHEIG--NLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNA-LTG-EIPYSFINL------RQLKLF 312 (995)
Q Consensus 251 --------~~~~~~--~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L 312 (995)
+|..++ ++++|++|++++|.+.+.+|..++++++|++|+|++|+ +++ .+|..+..+ ++|+.|
T Consensus 231 ~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L 310 (636)
T 4eco_A 231 NSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQII 310 (636)
T ss_dssp TSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEE
T ss_pred ccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEE
Confidence 677776 77777777777777777777777777777777777776 776 667666665 777777
Q ss_pred EccCCcCCCCCCc--cccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCc-cceeecccc
Q 001922 313 NLFMNRLHGSIPD--YLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQ-LRILILLKN 389 (995)
Q Consensus 313 ~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~l~~N 389 (995)
++++|+++ .+|. .+..+++|++|++++|+++|.+| .++.+++|++|+|++|+++ .+|..+..+++ |+.|++++|
T Consensus 311 ~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N 387 (636)
T 4eco_A 311 YIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHN 387 (636)
T ss_dssp ECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSS
T ss_pred ECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCC
Confidence 77777777 6666 67777777777777777776667 6777777777777777777 66666777766 777777777
Q ss_pred ccCCCCCcccccCC--CCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCccc
Q 001922 390 FLFGPIPERLGACY--SLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLS 467 (995)
Q Consensus 390 ~l~~~~p~~l~~l~--~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~ 467 (995)
.+. .+|..+..+. +|+.|++++|.+.+.+|..+.... .......+|++|+|++|+++
T Consensus 388 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~--------------------~~~~~~~~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 388 KLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLD--------------------PTPFKGINVSSINLSNNQIS 446 (636)
T ss_dssp CCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTC--------------------SSCCCCCCEEEEECCSSCCC
T ss_pred cCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccc--------------------cccccCCCCCEEECcCCccC
Confidence 766 5666665544 667777777776666665543110 01113457899999999999
Q ss_pred ccCCccccCCCCCcEEEcCCCcccCCCCCCccc-h-------hhhccccccccccCCCCCCccC--cccccceeeccCCc
Q 001922 468 GPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGE-L-------RQVLKLDLSRNSLSGEIPPAIG--YCNHLTYLDMSQNN 537 (995)
Q Consensus 468 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~ 537 (995)
+..+..+..+++|+.|+|++|+++ .+|..+.. . ++|+.|+|++|+++ .+|..+. .+++|++|+|++|+
T Consensus 447 ~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~ 524 (636)
T 4eco_A 447 KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNS 524 (636)
T ss_dssp SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSC
T ss_pred cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCC
Confidence 544444667999999999999999 66655443 2 39999999999999 7999887 99999999999999
Q ss_pred ccCCCccccccccccCeEec------cccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCC
Q 001922 538 LSGSIPPEISNVRILNYLNL------SRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLC 611 (995)
Q Consensus 538 l~~~ip~~l~~l~~L~~L~L------~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c 611 (995)
+++ +|..+.++++|+.|+| ++|++.+.+|..+..+++|+.|++++|++ +.+|..- ...+....+.+||..|
T Consensus 525 l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~-~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 525 FSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKI-TPNISVLDIKDNPNIS 601 (636)
T ss_dssp CSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCC-CTTCCEEECCSCTTCE
T ss_pred CCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhH-hCcCCEEECcCCCCcc
Confidence 997 9999999999999999 56889999999999999999999999999 7888652 3667788899999887
Q ss_pred C
Q 001922 612 G 612 (995)
Q Consensus 612 ~ 612 (995)
-
T Consensus 602 ~ 602 (636)
T 4eco_A 602 I 602 (636)
T ss_dssp E
T ss_pred c
Confidence 5
No 23
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=8.1e-50 Score=431.36 Aligned_cols=249 Identities=21% Similarity=0.249 Sum_probs=210.2
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCC--CCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGF--GTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||+||+|+. .+|+.||||++.+. ......+.+.+|++++++++|||||+++++|++++..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 4688999999999999999976 56899999998532 12334567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
|||+||+|.+++.. .+.+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+.+....
T Consensus 112 Ey~~gG~L~~~i~~--~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 112 SYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred ecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 99999999999963 457999999999999999999999887 9999999999999999999999999999876544
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
......+.+||+.|||||++.+..|+.++||||+||++|||++|+.||... +..+....+.... +
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~----~~~~~~~~i~~~~-----------~ 251 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG----NEGLIFAKIIKLE-----------Y 251 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHHTC-----------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHcCC-----------C
Confidence 444456779999999999999999999999999999999999999999642 2222222222221 1
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVV 955 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 955 (995)
..|...+..+.+++.+|++.||++|||++|+.
T Consensus 252 -~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 252 -DFPEKFFPKARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp -CCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred -CCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence 12334456789999999999999999999864
No 24
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=1.9e-49 Score=435.02 Aligned_cols=250 Identities=21% Similarity=0.304 Sum_probs=208.3
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
+.|+..+.||+|+||+||+|++. +|+.||||++.... ....+.+.+|++++++++|||||+++++|.+++..||||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGG-CSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCc-hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 46888889999999999999764 69999999985432 33456688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
|+||+|.+++.. ..+++..++.++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-- 224 (346)
T 4fih_A 153 LEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV-- 224 (346)
T ss_dssp CTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--
T ss_pred CCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEECCCCCEEEecCcCceecCCCC--
Confidence 999999999964 35899999999999999999999887 9999999999999999999999999998764332
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.... ..+....+... ..+.. .
T Consensus 225 ~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~~~i~~~--------~~~~~-~ 291 (346)
T 4fih_A 225 PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAMKMIRDN--------LPPRL-K 291 (346)
T ss_dssp CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHHHS--------SCCCC-S
T ss_pred CcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHHHHHcC--------CCCCC-C
Confidence 23356789999999999999999999999999999999999999996532 12222222211 11111 1
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+...+..+.+++.+||+.||++|||++|++++
T Consensus 292 ~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 292 NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp CGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 223456678999999999999999999999763
No 25
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-49 Score=432.96 Aligned_cols=254 Identities=24% Similarity=0.274 Sum_probs=206.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.+.|+..++||+|+||+||+|++ .+|+.||||++..... ..+|+.++++++|||||++++++.+++..|||||
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 35677888999999999999986 4689999999954221 2469999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC-CeEEeeeccccccccCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF-EAHVADFGLAKFLIDGG 842 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~-~vkl~DfGla~~~~~~~ 842 (995)
||+||+|.++++. .+.+++..+..++.||+.||+|||+++ ||||||||+|||++.+| .+||+|||+|+.+....
T Consensus 131 y~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~ 205 (336)
T 4g3f_A 131 LLEGGSLGQLIKQ--MGCLPEDRALYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205 (336)
T ss_dssp CCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCCGGGEEECTTSCCEEECCCTTCEEC----
T ss_pred ccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCC
Confidence 9999999999964 356999999999999999999999777 99999999999999998 69999999999765433
Q ss_pred CCc---cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 843 ASE---CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 843 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
... .....+||+.|||||++.+..|+.++||||+||++|||+||+.||.............. ..
T Consensus 206 ~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~----~~--------- 272 (336)
T 4g3f_A 206 LGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIAS----EP--------- 272 (336)
T ss_dssp --------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHH----SC---------
T ss_pred cccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHc----CC---------
Confidence 221 12346799999999999999999999999999999999999999976544333222211 11
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
+.....++..+..+.+++.+||+.||++|||++|+++.+....
T Consensus 273 ~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l 315 (336)
T 4g3f_A 273 PPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKAL 315 (336)
T ss_dssp CGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence 1111234456678999999999999999999999998876644
No 26
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.8e-49 Score=439.99 Aligned_cols=263 Identities=26% Similarity=0.388 Sum_probs=217.9
Q ss_pred HhhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCC-CCceeEeEEEec-CC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRH-RNIVRLLAFCSN-KE 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~-~~ 756 (995)
.++|+.++.||+|+||+||+|++. .++.||||++.........+.|.+|++++++++| ||||+++++|.+ ++
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~ 142 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 142 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC
Confidence 467889999999999999999753 2367999999665555556779999999999965 999999999865 45
Q ss_pred cceEEEEeccCCChhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC
Q 001922 757 TNLLVYEYMRNGSLGEALHGKK--------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN 822 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~ 822 (995)
..|+|||||++|+|.++++... ...+++..+..++.|||+||+|||+++ ||||||||+|||++
T Consensus 143 ~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~---iiHRDLK~~NILl~ 219 (353)
T 4ase_A 143 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS 219 (353)
T ss_dssp CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC
T ss_pred EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCC---eecCccCccceeeC
Confidence 7899999999999999996432 345899999999999999999999777 99999999999999
Q ss_pred CCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 001922 823 SAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQ 901 (995)
Q Consensus 823 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~ 901 (995)
+++.+||+|||+|+.+............+||+.|||||++.+..|+.++|||||||++|||+| |+.||........+..
T Consensus 220 ~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~ 299 (353)
T 4ase_A 220 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 299 (353)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence 999999999999997755444444456789999999999999999999999999999999998 9999976544433332
Q ss_pred HHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 902 WSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 902 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.+.. + .....|..++..+.+++.+||+.||++|||++||+++|+++.+.
T Consensus 300 ~i~~---g-----------~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 300 RLKE---G-----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp HHHH---T-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHHc---C-----------CCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHH
Confidence 2221 1 11123445667899999999999999999999999999887643
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.6e-48 Score=479.82 Aligned_cols=457 Identities=21% Similarity=0.256 Sum_probs=294.0
Q ss_pred CCCCeEeccCCcccCcc--ccCcccccceecc-ccccccCCCccccccc----c-----ccccccc-------ccccccc
Q 001922 92 DKLTNLSLAGNNFTGSI--EIGNLSSLQFLNI-SNNQFSGGLDWNYSSL----V-----NLEVFDA-------YNNNFTA 152 (995)
Q Consensus 92 ~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~L-s~N~i~~~~~~~~~~l----~-----~L~~L~L-------s~n~i~~ 152 (995)
.+++.|+|++|+++|.+ .+++|++|++|+| ++|.++|..+...... + .++.... ....+..
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999855 6999999999999 8898887644321111 0 0000000 0011111
Q ss_pred c-----------CCccccCCCCCceeeccC--ccccccCCccccCCCCCceeeccCCcccc-cCcccccchhhhhhhhcc
Q 001922 153 L-----------LPVGILKLEKLKYLDLGG--NYFFGKIPNSYGELQGLEYLSLAGNDLTG-KIPGELGNLTNLREIYLG 218 (995)
Q Consensus 153 ~-----------~p~~~~~l~~L~~L~L~~--N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~ 218 (995)
. .+........++.+.++. |.+++ +|..|+++++|++|+|++|++++ .+|..+... +
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~--------s 473 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDA--------N 473 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCT--------T
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCccccccccc--------c
Confidence 1 111112334455565654 88987 89999999999999999999997 222222111 1
Q ss_pred ccccccCCCCcccC--CCCcccEEECcCCCCCCccCccccCccccCcccccccc-ccC-CCCccccCcC-------CCCe
Q 001922 219 YYNVFEGGIPREVG--KLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINL-LSG-SIPKQLGNLT-------NLVN 287 (995)
Q Consensus 219 ~n~~~~~~~p~~~~--~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~-l~~-~~p~~l~~l~-------~L~~ 287 (995)
.+...+.+|..++ ++++|++|+|++|++.+.+|..|+++++|+.|++++|+ +++ .+|..+++++ +|++
T Consensus 474 -~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~ 552 (876)
T 4ecn_A 474 -SDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQI 552 (876)
T ss_dssp -SHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCE
T ss_pred -cccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccE
Confidence 1333455777766 77778888888887777777777778888888888877 776 6676555554 7888
Q ss_pred EeccCCcCcCcCCc--cccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCC-CCeEEecC
Q 001922 288 LDLSNNALTGEIPY--SFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGK-LQVLDLSS 364 (995)
Q Consensus 288 L~Ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~L~~ 364 (995)
|+|++|.++ .+|. .|.++++|+.|+|++|+++ .+| .|..+++|+.|+|++|+++ .+|..+..+++ |++|+|++
T Consensus 553 L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~ 628 (876)
T 4ecn_A 553 FYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSH 628 (876)
T ss_dssp EECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCS
T ss_pred EEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHHhhccccCCEEECcC
Confidence 888888887 6777 7788888888888888887 666 7777888888888888887 67777777777 88888888
Q ss_pred ceecccCCCcCcCCCc--cceeeccccccCCCCCccc---c--cCCCCcEEEecCCccCCCCCCC-cccCCCCceeeccC
Q 001922 365 NKLTGTIPTDLCSSNQ--LRILILLKNFLFGPIPERL---G--ACYSLTRVRLGQNYLNGSIPDG-FIYLPGLNLAELQS 436 (995)
Q Consensus 365 N~l~~~~p~~~~~l~~--L~~L~l~~N~l~~~~p~~l---~--~l~~L~~L~l~~N~l~~~~p~~-~~~l~~L~~l~l~~ 436 (995)
|+++ .+|..+..+.. |+.|++++|.+.+.+|... . .+.+|+.|++++|++.. +|.. +..+++|+.|+|++
T Consensus 629 N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~ 706 (876)
T 4ecn_A 629 NKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQK-FPTELFATGSPISTIILSN 706 (876)
T ss_dssp SCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCS
T ss_pred CCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCC
Confidence 8887 67777766644 7888888888777665322 2 23477788888888873 4443 33566666666666
Q ss_pred ccccCCCCCCCCCC-----CCCCCCcEEEcCCCcccccCCcccc--CCCCCcEEEcCCCcccCCCCCCccchhhhccccc
Q 001922 437 NYLSGSLPENGNSS-----SNPDRLGQLNLSNNLLSGPLPFSLS--NFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDL 509 (995)
Q Consensus 437 n~l~~~~~~~~~~~-----~~~~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 509 (995)
|+++ .+|...... .++++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..++.+++|+.|+|
T Consensus 707 N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~L 783 (876)
T 4ecn_A 707 NLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGI 783 (876)
T ss_dssp CCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEEC
T ss_pred CcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEEC
Confidence 6665 344332211 11225666666666666 4555554 56666666666666664 5556666666666666
Q ss_pred cccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCC
Q 001922 510 SRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 510 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 588 (995)
++|. ++++|++.+.+|..|.++++|+.|+|++|+| +.+|..+. ++|+.|||++|++..
T Consensus 784 s~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~--~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 784 RHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLT--PQLYILDIADNPNIS 841 (876)
T ss_dssp CCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCC--SSSCEEECCSCTTCE
T ss_pred CCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhc--CCCCEEECCCCCCCc
Confidence 5522 2233555555555555566666666666665 45555544 356666666665543
No 28
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-48 Score=464.33 Aligned_cols=453 Identities=21% Similarity=0.196 Sum_probs=300.0
Q ss_pred CeEeccCCcccCcc-ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCcc
Q 001922 95 TNLSLAGNNFTGSI-EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNY 173 (995)
Q Consensus 95 ~~L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~ 173 (995)
++|++++|+++... .+. ++|++|+|++|.+++..+..|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+
T Consensus 3 ~~l~ls~n~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 80 (520)
T 2z7x_B 3 FLVDRSKNGLIHVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNK 80 (520)
T ss_dssp CEEECTTSCCSSCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSC
T ss_pred ceEecCCCCccccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCc
Confidence 46888888888643 233 788888888888888777788888888888888888888777888888888888888888
Q ss_pred ccccCCccccCCCCCceeeccCCcccc-cCcccccchhhhhhhhccccccccCCCCcccCCCCcc--cEEECcCCCC--C
Q 001922 174 FFGKIPNSYGELQGLEYLSLAGNDLTG-KIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNL--VHLDLSSCEL--D 248 (995)
Q Consensus 174 l~~~~p~~l~~l~~L~~L~Ls~N~l~~-~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L--~~L~Ls~n~l--~ 248 (995)
++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+.. ..+..+++| ++|++++|.+ .
T Consensus 81 l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~l~~n~l~~~ 153 (520)
T 2z7x_B 81 LV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK----SSVLPIAHLNISKVLLVLGETYGE 153 (520)
T ss_dssp CC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG----GGGGGGTTSCEEEEEEEECTTTTS
T ss_pred ee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch----hhccccccceeeEEEeeccccccc
Confidence 87 45554 67888888888888876 356667777666666666555433 234445555 6666666666 4
Q ss_pred CccCccccCcc-ccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCc-------CC
Q 001922 249 GQIPHEIGNLK-LLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNR-------LH 320 (995)
Q Consensus 249 ~~~~~~~~~l~-~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------l~ 320 (995)
+..|..+..++ ....+++++|++.+.++. ..+.++++|+.|++++|. +.
T Consensus 154 ~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~-----------------------~~~~~l~~L~~L~l~~n~~~~~~~~~~ 210 (520)
T 2z7x_B 154 KEDPEGLQDFNTESLHIVFPTNKEFHFILD-----------------------VSVKTVANLELSNIKCVLEDNKCSYFL 210 (520)
T ss_dssp SCCTTTTTTCCEEEEEEECCSSSCCCCCCC-----------------------CCCTTCSEEEECCEEECCSTTTTHHHH
T ss_pred ccccccccccccceEEEEeccCcchhhhhh-----------------------hhhhcccceeeccccccccccccceee
Confidence 45555554443 222334444444433222 233444444444444444 33
Q ss_pred CCCCccccCCCCcceEEeccCcccccCCCccc---CCCCCCeEEecCceecccCCCcC-----cCCCccceeeccccccC
Q 001922 321 GSIPDYLADLPNLETLGLWQNNFTGVIPENLG---QNGKLQVLDLSSNKLTGTIPTDL-----CSSNQLRILILLKNFLF 392 (995)
Q Consensus 321 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~ 392 (995)
+.+| .+..+++|+.|++++|.+++..+..+. ..++|++|++++|+++|.+|..+ ..++.|+.+++++|.+
T Consensus 211 ~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~- 288 (520)
T 2z7x_B 211 SILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF- 288 (520)
T ss_dssp HHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC-
T ss_pred cchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce-
Confidence 3333 455555566666655555532221111 13466666666666666666666 6666666666666666
Q ss_pred CCCC-cccccC---CCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccc
Q 001922 393 GPIP-ERLGAC---YSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSG 468 (995)
Q Consensus 393 ~~~p-~~l~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~ 468 (995)
.+| ..+..+ .+|+.|++++|.+.+.. .+..+++|+.+++++|++++.+|.. ...+++|++|+|++|++++
T Consensus 289 -~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~---~~~l~~L~~L~L~~N~l~~ 362 (520)
T 2z7x_B 289 -GFPQSYIYEIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFEN---CGHLTELETLILQMNQLKE 362 (520)
T ss_dssp -CSCTHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT---CCCCSSCCEEECCSSCCCB
T ss_pred -ecchhhhhcccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhh---hccCCCCCEEEccCCccCc
Confidence 344 344433 45777777777665322 1145566666666666666554432 2455678888888888876
Q ss_pred --cCCccccCCCCCcEEEcCCCcccCCCCC-CccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccc
Q 001922 469 --PLPFSLSNFSSLQILLLSGNQFSGPIPP-SIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPE 545 (995)
Q Consensus 469 --~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~ 545 (995)
.+|..+.++++|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..
T Consensus 363 l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~ 439 (520)
T 2z7x_B 363 LSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQ 439 (520)
T ss_dssp HHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGG
T ss_pred cccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchh
Confidence 5567788888888888888888875554 477788888888888888877777664 78888888888888 78888
Q ss_pred cccccccCeEeccccccccccCcc-cccCCcccEEeccCCCCCCCCC
Q 001922 546 ISNVRILNYLNLSRNHLNQNIPKS-IGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 546 l~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~g~~p 591 (995)
+..+++|++|+|++|+|++ +|.. +..+++|+.|++++|++++..+
T Consensus 440 ~~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 440 VVKLEALQELNVASNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp GGGCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhcCCCCCEEECCCCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 8888888888888888875 5554 8888888888888888877544
No 29
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.9e-48 Score=437.69 Aligned_cols=251 Identities=21% Similarity=0.305 Sum_probs=209.2
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.+.|+..+.||+|+||+||+|++ .+|+.||||++... .....+.+.+|+.++++++|||||+++++|.+++.+|||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~-~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmE 228 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLR-KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVME 228 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEST-TCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEecc-chhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEe
Confidence 45688899999999999999976 46899999999543 33445678999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
||+||+|.+++.. ..+++..+..++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 229 y~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~---IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~- 301 (423)
T 4fie_A 229 FLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV- 301 (423)
T ss_dssp CCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-
T ss_pred CCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEecCccceECCCCC-
Confidence 9999999999963 35899999999999999999999887 9999999999999999999999999998764432
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.. ..+....+... ..+...
T Consensus 302 -~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~----~~~~~~~i~~~--------~~~~~~ 368 (423)
T 4fie_A 302 -PRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP----PLKAMKMIRDN--------LPPRLK 368 (423)
T ss_dssp -CCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC----HHHHHHHHHHS--------CCCCCS
T ss_pred -ccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC----HHHHHHHHHcC--------CCCCCc
Confidence 23356789999999999999999999999999999999999999996432 12222222211 111111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+...+..+.+++.+||+.||++|||++|++++
T Consensus 369 -~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 369 -NLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp -CTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred -ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 122345678999999999999999999999763
No 30
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-48 Score=420.03 Aligned_cols=249 Identities=30% Similarity=0.425 Sum_probs=198.6
Q ss_pred ccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEec----CCcceEE
Q 001922 688 VKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN----KETNLLV 761 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~lv 761 (995)
|+..+.||+|+||+||+|.+ .+++.||+|++.... .....++|.+|++++++++|||||+++++|.+ ++..|+|
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lv 107 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEE
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEE
Confidence 35567899999999999976 468899999985432 33345679999999999999999999999865 3467999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-CCCeEEeeecccccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS-AFEAHVADFGLAKFLID 840 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~-~~~vkl~DfGla~~~~~ 840 (995)
||||+||+|.+++.. ...+++..+..++.||+.||+|||+++ ++||||||||+|||++. ++.+||+|||+|+....
T Consensus 108 mEy~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~ 184 (290)
T 3fpq_A 108 TELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA 184 (290)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEecccChhheeEECCCCCEEEEeCcCCEeCCC
Confidence 999999999999964 457899999999999999999999653 34999999999999984 79999999999985422
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
......+||+.|||||++.+ .|+.++|||||||++|||+||+.||....+ .......+.......
T Consensus 185 ----~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~---~~~~~~~i~~~~~~~------- 249 (290)
T 3fpq_A 185 ----SFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN---AAQIYRRVTSGVKPA------- 249 (290)
T ss_dssp ----TSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS---HHHHHHHHTTTCCCG-------
T ss_pred ----CccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc---HHHHHHHHHcCCCCC-------
Confidence 22346789999999998865 699999999999999999999999965332 222223332221110
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...+..+.+++.+||+.||++|||++|++++
T Consensus 250 ---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 250 ---SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp ---GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred ---CCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 1112234568899999999999999999999863
No 31
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3e-48 Score=413.65 Aligned_cols=247 Identities=26% Similarity=0.331 Sum_probs=193.0
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.+|+..+.||+|+||+||+|+. .+|+.||||++.+.. ......++.+|++++++++|||||++++++.+++..|+||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5789999999999999999976 469999999985432 2233567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+ +|+|.+++.. ...+++..+..++.||+.||+|||+++ |+||||||+|||+++++.+||+|||+|+...+.
T Consensus 93 Ey~-~g~L~~~l~~--~~~l~e~~~~~~~~qi~~al~ylH~~~---IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~- 165 (275)
T 3hyh_A 93 EYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG- 165 (275)
T ss_dssp ECC-CEEHHHHHHH--SCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred eCC-CCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCChHHeEECCCCCEEEeecCCCeecCCC-
Confidence 999 6799999964 356999999999999999999999887 999999999999999999999999999876432
Q ss_pred CCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......+||+.|||||++.+..+ +.++||||+||++|||+||+.||.+. ......+.+....
T Consensus 166 --~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~----~~~~~~~~i~~~~----------- 228 (275)
T 3hyh_A 166 --NFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDE----SIPVLFKNISNGV----------- 228 (275)
T ss_dssp -----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHHTC-----------
T ss_pred --CccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHHcCC-----------
Confidence 23345789999999999998886 58999999999999999999999642 2223333332221
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++|||++|++++
T Consensus 229 -~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 263 (275)
T 3hyh_A 229 -YTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQD 263 (275)
T ss_dssp -CCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHC
T ss_pred -CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHcC
Confidence 11233445678899999999999999999999873
No 32
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=3.3e-48 Score=461.37 Aligned_cols=451 Identities=22% Similarity=0.232 Sum_probs=365.2
Q ss_pred ceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCC
Q 001922 117 QFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGN 196 (995)
Q Consensus 117 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 196 (995)
++||+++|+++.++ ..+. ++|++|++++|+++++.|..|.++++|++|+|++|++++..|..|+++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~~ip-~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLIHVP-KDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCSSCC-CSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCccccc-cccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46788888887543 3333 67777777777777766677777777777777777777666777777777777777777
Q ss_pred cccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCC-ccCccccCccccCccccccccccCCC
Q 001922 197 DLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDG-QIPHEIGNLKLLDTVFLHINLLSGSI 275 (995)
Q Consensus 197 ~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~ 275 (995)
+++ .+| .. .+++|++|+|++|++++ .+|..|+.+++|++|++++|.+++
T Consensus 80 ~l~-~lp-------------------------~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~-- 129 (520)
T 2z7x_B 80 KLV-KIS-------------------------CH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK-- 129 (520)
T ss_dssp CCC-EEE-------------------------CC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--
T ss_pred cee-ecC-------------------------cc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch--
Confidence 776 233 22 45677888888888876 457778888888888888888775
Q ss_pred CccccCcCCC--CeEeccCCcC--cCcCCccccccC-CCCEEEccCCcCCCCCCc-cccCCCCcceEEeccCc-------
Q 001922 276 PKQLGNLTNL--VNLDLSNNAL--TGEIPYSFINLR-QLKLFNLFMNRLHGSIPD-YLADLPNLETLGLWQNN------- 342 (995)
Q Consensus 276 p~~l~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~------- 342 (995)
..+..+++| +.|++++|.+ .+..|..|..+. +...+++++|++.+.+++ .+..+++|+.|++++|.
T Consensus 130 -~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~ 208 (520)
T 2z7x_B 130 -SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSY 208 (520)
T ss_dssp -GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHH
T ss_pred -hhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccce
Confidence 356677777 9999999999 778888887766 345678899998876654 67889999999999998
Q ss_pred ccccCCCcccCCCCCCeEEecCceecccCCCcCc---CCCccceeeccccccCCCCCccc-----ccCCCCcEEEecCCc
Q 001922 343 FTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLC---SSNQLRILILLKNFLFGPIPERL-----GACYSLTRVRLGQNY 414 (995)
Q Consensus 343 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~l~~N~l~~~~p~~l-----~~l~~L~~L~l~~N~ 414 (995)
+.+.+| .++.+++|+.|++++|.+++..+..+. ..++|+.|++++|.+.|.+|..+ +.+++|+.+++++|.
T Consensus 209 ~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~ 287 (520)
T 2z7x_B 209 FLSILA-KLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDV 287 (520)
T ss_dssp HHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECC
T ss_pred eecchh-hhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccc
Confidence 777776 789999999999999999864433222 14589999999999999999999 999999999999999
Q ss_pred cCCCCC-CCcccC---CCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcc
Q 001922 415 LNGSIP-DGFIYL---PGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQF 490 (995)
Q Consensus 415 l~~~~p-~~~~~l---~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 490 (995)
+ .+| ..+..+ .+++.+++++|.+.... ....+++|++|++++|++++.+|..+.++++|+.|+|++|++
T Consensus 288 ~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~-----~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l 360 (520)
T 2z7x_B 288 F--GFPQSYIYEIFSNMNIKNFTVSGTRMVHML-----CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQL 360 (520)
T ss_dssp C--CSCTHHHHHHHHTCCCSEEEEESSCCCCCC-----CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCC
T ss_pred e--ecchhhhhcccccCceeEEEcCCCcccccc-----chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCcc
Confidence 9 556 445444 67999999999986432 124678999999999999998999999999999999999999
Q ss_pred cC--CCCCCccchhhhccccccccccCCCCCCc-cCcccccceeeccCCcccCCCccccccccccCeEeccccccccccC
Q 001922 491 SG--PIPPSIGELRQVLKLDLSRNSLSGEIPPA-IGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIP 567 (995)
Q Consensus 491 ~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p 567 (995)
++ .+|..++.+++|+.|+|++|.+++.+|.. +..+++|++|+|++|++++.+|..+. ++|+.|+|++|+++ .+|
T Consensus 361 ~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip 437 (520)
T 2z7x_B 361 KELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIP 437 (520)
T ss_dssp CBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCC
T ss_pred CccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccc
Confidence 96 55678999999999999999999867764 88999999999999999988888775 79999999999998 689
Q ss_pred cccccCCcccEEeccCCCCCCCCCC-CCCCcccccccCCCCccCCC
Q 001922 568 KSIGSMKSLTIADFSFNDFSGKLPE-SGQFTVFNASSFAGNPQLCG 612 (995)
Q Consensus 568 ~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~~c~ 612 (995)
..+..+++|+.|++++|++++.++. ...+..+....+.|||+.|.
T Consensus 438 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 438 KQVVKLEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 483 (520)
T ss_dssp GGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred hhhhcCCCCCEEECCCCcCCccCHHHhccCCcccEEECcCCCCccc
Confidence 9888999999999999999964443 34566777788999999987
No 33
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=1.8e-48 Score=421.23 Aligned_cols=248 Identities=24% Similarity=0.253 Sum_probs=198.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+.||+|+||+||+|+.. +++.||||++.+.. ......++.+|++++++++|||||++++++++++..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46899999999999999999752 47889999985422 12234468889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
|||||+||+|.+++.. .+.+++..+..++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+|+...+
T Consensus 104 vmEy~~gg~L~~~l~~--~~~l~e~~~~~~~~qi~~aL~ylH~~~---IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSK--EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp EECCCTTCEEHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEEcCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 9999999999999964 356899999999999999999999887 99999999999999999999999999986543
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. ......+||+.|||||++.+..|+.++||||+||++|||+||+.||... +..+....+....
T Consensus 179 ~~--~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~----~~~~~~~~i~~~~---------- 242 (304)
T 3ubd_A 179 HE--KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGK----DRKETMTMILKAK---------- 242 (304)
T ss_dssp ----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHHCC----------
T ss_pred CC--ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCc----CHHHHHHHHHcCC----------
Confidence 22 2234678999999999999999999999999999999999999999643 2222222222211
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRM-----REVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 956 (995)
...|...+..+.+++.+||+.||++|||+ +|+++
T Consensus 243 --~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 243 --LGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred --CCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 11233456678999999999999999984 56654
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=3.1e-46 Score=456.12 Aligned_cols=553 Identities=20% Similarity=0.159 Sum_probs=393.4
Q ss_pred CCCCCCCCCCCCCCCCCceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccce
Q 001922 41 NPEPALISWNSSNPSSVCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQF 118 (995)
Q Consensus 41 ~~~~~l~~W~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~ 118 (995)
|+...+++|+.+.|. .|+.-.|.... ...|.++.+|+ .||+.+. +++++|||++|+|++.. .|.++++|++
T Consensus 8 ~~~~~~~~~~~~~p~---~~~~c~~~~~~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~l~~L~~ 80 (635)
T 4g8a_A 8 DDDDKLAAANSSIPE---SWEPCVEVVPN-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQV 80 (635)
T ss_dssp --------------------CCSEEEETT-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCcchhhcccCCCCC---CCCCccccCCC-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhCCCCCCE
Confidence 566678888765442 23222221111 12244455555 5676553 46888888888888743 5888888888
Q ss_pred eccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcc
Q 001922 119 LNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDL 198 (995)
Q Consensus 119 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 198 (995)
|+|++|+|+++.+++|.++++|++|+|++|+|+++.+..|.++++|++|+|++|++++..+..|+++++|++|+|++|++
T Consensus 81 L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l 160 (635)
T 4g8a_A 81 LDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLI 160 (635)
T ss_dssp EECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCC
T ss_pred EECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCcc
Confidence 88888888888888888888888888888888887777888888888888888888876667788888888888888888
Q ss_pred ccc-CcccccchhhhhhhhccccccccCCCCcccCCCCcc----cEEECcCCCCCCccCccccCccccCccccccccccC
Q 001922 199 TGK-IPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNL----VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSG 273 (995)
Q Consensus 199 ~~~-~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L----~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 273 (995)
++. +|..++++++|++|++++|++. +..+..+..+.++ ..++++.|.++...+..+. ...+..+++.+|....
T Consensus 161 ~~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~n~~~~ 238 (635)
T 4g8a_A 161 QSFKLPEYFSNLTNLEHLDLSSNKIQ-SIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRNNFDSL 238 (635)
T ss_dssp CCCCCCGGGGGCTTCCEEECCSSCCC-EECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEESCCSSH
T ss_pred ccCCCchhhccchhhhhhcccCcccc-ccccccccchhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhcccccc
Confidence 753 5777888888888888866553 3445555554443 4688888888855444443 3456677777776543
Q ss_pred -CCCccccCcCCCCeEeccCCc------CcCcCCccccccCCCCEEEccCCcCCCC---CCccccCCCCcceEEeccCcc
Q 001922 274 -SIPKQLGNLTNLVNLDLSNNA------LTGEIPYSFINLRQLKLFNLFMNRLHGS---IPDYLADLPNLETLGLWQNNF 343 (995)
Q Consensus 274 -~~p~~l~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~~L~~L~L~~N~l~~~---~p~~~~~l~~L~~L~L~~N~l 343 (995)
..+..+..+..++...+..+. +.......+..+..+....+..+..... .+..+..+.+++.+++.+|.+
T Consensus 239 ~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~ 318 (635)
T 4g8a_A 239 NVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTI 318 (635)
T ss_dssp HHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEE
T ss_pred cccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhccccccccccccc
Confidence 233456667777766664332 3333445566666777766665544322 334456677888888888887
Q ss_pred cccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCC--CCCC
Q 001922 344 TGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNG--SIPD 421 (995)
Q Consensus 344 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~--~~p~ 421 (995)
.... .+.....|+.|++++|.+.+..+. .+..|+.+++..|.+... .....+++|+.+++++|.+.. ..+.
T Consensus 319 ~~~~--~~~~~~~L~~L~l~~~~~~~~~~~---~l~~L~~l~l~~n~~~~~--~~~~~l~~L~~L~ls~n~l~~~~~~~~ 391 (635)
T 4g8a_A 319 ERVK--DFSYNFGWQHLELVNCKFGQFPTL---KLKSLKRLTFTSNKGGNA--FSEVDLPSLEFLDLSRNGLSFKGCCSQ 391 (635)
T ss_dssp EECG--GGGSCCCCSEEEEESCEESSCCCC---BCTTCCEEEEESCCSCCB--CCCCBCTTCCEEECCSSCCBEEEECCH
T ss_pred cccc--ccccchhhhhhhcccccccCcCcc---cchhhhhcccccccCCCC--cccccccccccchhhcccccccccccc
Confidence 7432 356667888888888888754433 456677788888876543 334578888899998888753 4556
Q ss_pred CcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCC-ccccCCCCCcEEEcCCCcccCCCCCCccc
Q 001922 422 GFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLP-FSLSNFSSLQILLLSGNQFSGPIPPSIGE 500 (995)
Q Consensus 422 ~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 500 (995)
.+..+.+++.+++..+.+.+..+ .+..+..|+.++++.|+.....+ ..+.++++++.+++++|++++..|..+..
T Consensus 392 ~~~~~~~L~~L~~~~~~~~~~~~----~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~ 467 (635)
T 4g8a_A 392 SDFGTISLKYLDLSFNGVITMSS----NFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 467 (635)
T ss_dssp HHHSCSCCCEEECCSCSEEEECS----CCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred chhhhhhhhhhhccccccccccc----cccccccccchhhhhcccccccccccccccccccccccccccccccccccccc
Confidence 66778888888888887765432 24456788999998888775554 45778899999999999999888888899
Q ss_pred hhhhcccccccccc-CCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEE
Q 001922 501 LRQVLKLDLSRNSL-SGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIA 579 (995)
Q Consensus 501 l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l 579 (995)
+++|+.|+|++|.+ .+.+|..|..+++|++|+|++|+|++.+|.+|.++++|++|+|++|+|++..|..+..+++|++|
T Consensus 468 ~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L 547 (635)
T 4g8a_A 468 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVL 547 (635)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEE
T ss_pred chhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEE
Confidence 99999999999874 44578889999999999999999998888889999999999999999998888889999999999
Q ss_pred eccCCCCCCCCCCC-CCC-cccccccCCCCccCCCC
Q 001922 580 DFSFNDFSGKLPES-GQF-TVFNASSFAGNPQLCGT 613 (995)
Q Consensus 580 ~ls~N~l~g~~p~~-~~~-~~~~~~~~~~n~~~c~~ 613 (995)
||++|+|++.+|.. ..+ +.+....+.||||.|++
T Consensus 548 ~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 548 DYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred ECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 99999999988863 223 45666778899999983
No 35
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2e-47 Score=417.79 Aligned_cols=266 Identities=26% Similarity=0.313 Sum_probs=201.1
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC----cceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE----TNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----~~~lv 761 (995)
++|...+.||+|+||+||+|++ +|+.||||++... ......+..|+..+.+++|||||++++++.+++ ..|+|
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~--~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV 79 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR--EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECcc--chhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEE
Confidence 4577888999999999999988 6899999998432 111222345666677889999999999997653 57999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC-----SPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-----~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
||||++|+|.++++.. .+++..+.+++.|++.||+|||+++ .++||||||||+|||++.++.+||+|||+|+
T Consensus 80 ~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~ 156 (303)
T 3hmm_A 80 SDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred ecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCc
Confidence 9999999999999743 5899999999999999999999751 2359999999999999999999999999998
Q ss_pred ccccCCCCc--cccccccCcccccccccccC------CCCcccchhhHHHHHHHHHhCCCCCCCCCCC-----------c
Q 001922 837 FLIDGGASE--CMSAIAGSYGYIAPEYAYTL------RVDEKSDVYSFGVVLLELLTGRRPVGDFGDG-----------V 897 (995)
Q Consensus 837 ~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg~~Pf~~~~~~-----------~ 897 (995)
......... .....+||+.|||||++.+. .++.++|||||||++|||+||+.||....+. .
T Consensus 157 ~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~ 236 (303)
T 3hmm_A 157 RHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDP 236 (303)
T ss_dssp EEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSC
T ss_pred cccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccc
Confidence 765433211 22346799999999998754 4678999999999999999998876432211 1
Q ss_pred hHHHHHHHHhcCChhhhhhhcCCcCCC--CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 898 DIVQWSKRATNGRKEEFLSILDPRLSM--VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
........+... ..+|..+. .+.+++..+.+++.+||+.||++||||+||++.|+++.+.
T Consensus 237 ~~~~~~~~~~~~-------~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~ 298 (303)
T 3hmm_A 237 SVEEMRKVVCEQ-------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CHHHHHHHHTTS-------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHhcc-------cCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHH
Confidence 111222111111 11222221 1235677899999999999999999999999999987653
No 36
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=6.6e-46 Score=453.19 Aligned_cols=508 Identities=23% Similarity=0.183 Sum_probs=426.9
Q ss_pred ceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccc
Q 001922 69 RVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAY 146 (995)
Q Consensus 69 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls 146 (995)
.++.|||++|+|++..+..|.++++|++|+|++|+|++.. .|.+|++|++|+|++|+|+++++..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 5889999999999877789999999999999999999754 58999999999999999999999999999999999999
Q ss_pred cccccccCCccccCCCCCceeeccCccccc-cCCccccCCCCCceeeccCCcccccCcccccchhhhhh----hhccccc
Q 001922 147 NNNFTALLPVGILKLEKLKYLDLGGNYFFG-KIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLRE----IYLGYYN 221 (995)
Q Consensus 147 ~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~----L~L~~n~ 221 (995)
+|+++++.+..|+++++|++|+|++|.+++ .+|..++.+++|++|+|++|++++..+..+..+.+++. ++++.|.
T Consensus 133 ~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~ 212 (635)
T 4g8a_A 133 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 212 (635)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred CCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCc
Confidence 999999888899999999999999999975 46888999999999999999999999999998888764 4555554
Q ss_pred cccCCCCcccCCCCcccEEECcCCCCCCc-cCccccCccccCcccccccc------ccCCCCccccCcCCCCeEeccCCc
Q 001922 222 VFEGGIPREVGKLVNLVHLDLSSCELDGQ-IPHEIGNLKLLDTVFLHINL------LSGSIPKQLGNLTNLVNLDLSNNA 294 (995)
Q Consensus 222 ~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~l~~N~------l~~~~p~~l~~l~~L~~L~Ls~N~ 294 (995)
+.. ++........+..+++++|..... .+..+..+..++...+..+. +.......+..+..+..+++..+.
T Consensus 213 l~~--i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 213 MNF--IQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCE--ECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred ccc--cCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 432 445555566788999999876533 34455666666665554332 333344556667777777777655
Q ss_pred CcC---cCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccC
Q 001922 295 LTG---EIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTI 371 (995)
Q Consensus 295 l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 371 (995)
... ..+..+..+.+++.+.+.+|.+.... .+....+|+.|++.+|.+.+..+ ..+..|+.+++++|.+...
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~---~~l~~L~~l~l~~n~~~~~- 364 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPT---LKLKSLKRLTFTSNKGGNA- 364 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCC---CBCTTCCEEEEESCCSCCB-
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCc---ccchhhhhcccccccCCCC-
Confidence 432 33456777889999999999987433 35667899999999999986544 3567899999999998743
Q ss_pred CCcCcCCCccceeeccccccC--CCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCC
Q 001922 372 PTDLCSSNQLRILILLKNFLF--GPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNS 449 (995)
Q Consensus 372 p~~~~~l~~L~~L~l~~N~l~--~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~ 449 (995)
.....+++|+.|++++|.+. +..+..+..+.+|+.+++..|.+.. .+..+..++.|+.+++..+......+.. .
T Consensus 365 -~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~--~ 440 (635)
T 4g8a_A 365 -FSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFS--V 440 (635)
T ss_dssp -CCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSC--T
T ss_pred -cccccccccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccc--c
Confidence 34567899999999999885 4567777888999999999999875 5667889999999999999888765543 3
Q ss_pred CCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCccc-CCCCCCccchhhhccccccccccCCCCCCccCccccc
Q 001922 450 SSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFS-GPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHL 528 (995)
Q Consensus 450 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 528 (995)
+..+..++.++++.|++++..+..+..++.|+.|+|++|++. +..|..|..+++|+.|+|++|+|++..|..|+.+++|
T Consensus 441 ~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L 520 (635)
T 4g8a_A 441 FLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 520 (635)
T ss_dssp TTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred cccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC
Confidence 456789999999999999999999999999999999999854 4678899999999999999999999889999999999
Q ss_pred ceeeccCCcccCCCccccccccccCeEeccccccccccCcccccC-CcccEEeccCCCCCC
Q 001922 529 TYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSM-KSLTIADFSFNDFSG 588 (995)
Q Consensus 529 ~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~l~ls~N~l~g 588 (995)
++|+|++|+|++..|..|.++++|++|+|++|+|++.+|..+..+ ++|+.|+|++|++..
T Consensus 521 ~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 521 QVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp CEEECTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred CEEECCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 999999999998888999999999999999999999999999998 689999999999985
No 37
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.1e-46 Score=409.44 Aligned_cols=252 Identities=21% Similarity=0.326 Sum_probs=191.1
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC-------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE------- 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------- 756 (995)
.++|+..+.||+|+||+||+|++ .+|+.||||++.........+.+.+|++++++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35688899999999999999976 4689999999865444445567899999999999999999999986544
Q ss_pred -----cceEEEEeccCCChhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 757 -----TNLLVYEYMRNGSLGEALHGKKG-AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 757 -----~~~lv~e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
+.|+|||||++|+|.+++..... ...++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~---IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCc---CccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999975432 34566778899999999999999887 9999999999999999999999
Q ss_pred eeccccccccCCCC----------ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHH
Q 001922 831 DFGLAKFLIDGGAS----------ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIV 900 (995)
Q Consensus 831 DfGla~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~ 900 (995)
|||+|+.+...... ......+||+.|||||++.+..|+.++||||+||++|||++ ||.. ..+..
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~---~~~~~ 234 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFST---QMERV 234 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSS---HHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCC---ccHHH
Confidence 99999876543221 11234679999999999999999999999999999999996 7743 11111
Q ss_pred HHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 901 QWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.....+... ..+......+....+++.+||+.||++|||+.|+++
T Consensus 235 ~~~~~~~~~-----------~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTLTDVRNL-----------KFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHHHHHHTT-----------CCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHhcC-----------CCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111211111 111112234456778999999999999999999987
No 38
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3.5e-45 Score=439.00 Aligned_cols=458 Identities=19% Similarity=0.184 Sum_probs=303.6
Q ss_pred CCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccC
Q 001922 92 DKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGG 171 (995)
Q Consensus 92 ~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~ 171 (995)
...+++++++|++++... .-.++|++|+|++|.|+++.+..|.++++|++|+|++|+|+++.|..|.++++|++|+|++
T Consensus 31 ~~~~~l~ls~~~L~~ip~-~~~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 109 (562)
T 3a79_B 31 ELESMVDYSNRNLTHVPK-DLPPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSH 109 (562)
T ss_dssp --CCEEECTTSCCCSCCT-TSCTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTT
T ss_pred CCCcEEEcCCCCCccCCC-CCCCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCC
Confidence 344889999999987442 1238899999999999998888999999999999999999998889999999999999999
Q ss_pred ccccccCCccccCCCCCceeeccCCccccc-CcccccchhhhhhhhccccccccCCCCcccCCCCcc--cEEECcCCCC-
Q 001922 172 NYFFGKIPNSYGELQGLEYLSLAGNDLTGK-IPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNL--VHLDLSSCEL- 247 (995)
Q Consensus 172 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~-~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L--~~L~Ls~n~l- 247 (995)
|+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|.+.. ..+..+++| ++|++++|.+
T Consensus 110 N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~----~~~~~l~~L~L~~L~L~~n~l~ 182 (562)
T 3a79_B 110 NRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ----LDLLPVAHLHLSCILLDLVSYH 182 (562)
T ss_dssp SCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT----TTTGGGTTSCEEEEEEEESSCC
T ss_pred CcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCcccc----CchhhhhhceeeEEEeeccccc
Confidence 9997 56665 789999999999999863 35778888888888777665543 233344444 7777777777
Q ss_pred -CCccCccccCcc--ccCccccccccccCCCCc-cccCcCCCCeEeccCCcC-----cCcCCccccccCCCCEEEccCCc
Q 001922 248 -DGQIPHEIGNLK--LLDTVFLHINLLSGSIPK-QLGNLTNLVNLDLSNNAL-----TGEIPYSFINLRQLKLFNLFMNR 318 (995)
Q Consensus 248 -~~~~~~~~~~l~--~L~~L~l~~N~l~~~~p~-~l~~l~~L~~L~Ls~N~l-----~~~~p~~~~~l~~L~~L~L~~N~ 318 (995)
++..|..+..+. .+ .++++.|.+.+.++. .+..+++|+.|++++|.. .+ ....|.++++|+.|+++++.
T Consensus 183 ~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~-~~~~l~~l~~L~~L~L~~~~ 260 (562)
T 3a79_B 183 IKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMT-FLSELTRGPTLLNVTLQHIE 260 (562)
T ss_dssp CCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHH-HHHHHHSCSSCEEEEEEEEE
T ss_pred ccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHH-HHHHHhccCcceEEEecCCc
Confidence 666666665543 22 345556655544333 344555666666665531 11 11223344444444444443
Q ss_pred CCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcC-----cCCCccceeeccccccCC
Q 001922 319 LHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDL-----CSSNQLRILILLKNFLFG 393 (995)
Q Consensus 319 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~l~~N~l~~ 393 (995)
+.+. .+.+. +..+ ...+|++|++++|+++|.+|..+ ..++.|+.+++..|.+
T Consensus 261 l~~~-------------------~~~~~-~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~-- 317 (562)
T 3a79_B 261 TTWK-------------------CSVKL-FQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF-- 317 (562)
T ss_dssp ECHH-------------------HHHHH-HHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--
T ss_pred CcHH-------------------HHHHH-HHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhhccccee--
Confidence 3321 11111 1111 12355555555555555555554 4455555555555544
Q ss_pred CCC-cccccC---CCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccc-
Q 001922 394 PIP-ERLGAC---YSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSG- 468 (995)
Q Consensus 394 ~~p-~~l~~l---~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~- 468 (995)
.+| ..+..+ .+|+.|++++|.+.... ....+++|+.+++++|++++.+|.. ...+++|++|+|++|++++
T Consensus 318 ~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~---~~~l~~L~~L~L~~N~l~~~ 392 (562)
T 3a79_B 318 LFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQG---CSTLKRLQTLILQRNGLKNF 392 (562)
T ss_dssp SSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTT---CCSCSSCCEEECCSSCCCBT
T ss_pred ecChhhhhhhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhh---hcccCCCCEEECCCCCcCCc
Confidence 233 222211 34666666666654221 1144555666666666665544432 2445677788888888875
Q ss_pred -cCCccccCCCCCcEEEcCCCcccCCCCC-CccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCcccc
Q 001922 469 -PLPFSLSNFSSLQILLLSGNQFSGPIPP-SIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEI 546 (995)
Q Consensus 469 -~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l 546 (995)
.+|..+.++++|+.|+|++|++++.+|. .+..+++|+.|+|++|++++.+|..+. ++|++|+|++|+++ .+|..+
T Consensus 393 ~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~ 469 (562)
T 3a79_B 393 FKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDV 469 (562)
T ss_dssp THHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTT
T ss_pred ccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhh
Confidence 3356678888888888888888874554 477888888888888888877776654 68888888888888 788877
Q ss_pred ccccccCeEeccccccccccCcc-cccCCcccEEeccCCCCCCCCC
Q 001922 547 SNVRILNYLNLSRNHLNQNIPKS-IGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 547 ~~l~~L~~L~L~~N~l~~~~p~~-~~~l~~L~~l~ls~N~l~g~~p 591 (995)
.++++|++|+|++|+|++ +|.. +..+++|+.+++++|++.+..|
T Consensus 470 ~~l~~L~~L~L~~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 514 (562)
T 3a79_B 470 THLQALQELNVASNQLKS-VPDGVFDRLTSLQYIWLHDNPWDCTCP 514 (562)
T ss_dssp TSSCCCSEEECCSSCCCC-CCTTSTTTCTTCCCEECCSCCBCCCHH
T ss_pred cCCCCCCEEECCCCCCCC-CCHHHHhcCCCCCEEEecCCCcCCCcc
Confidence 788888888888888875 5555 8888888888888888887665
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=8.3e-45 Score=435.78 Aligned_cols=455 Identities=19% Similarity=0.184 Sum_probs=351.0
Q ss_pred cccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCcee
Q 001922 112 NLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYL 191 (995)
Q Consensus 112 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 191 (995)
.+...+++++++|++++++. .+. ++|++|++++|.|+++.|..|.++++|++|+|++|++++..|..|+++++|++|
T Consensus 29 ~~~~~~~l~ls~~~L~~ip~-~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 105 (562)
T 3a79_B 29 SNELESMVDYSNRNLTHVPK-DLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYL 105 (562)
T ss_dssp ----CCEEECTTSCCCSCCT-TSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEE
T ss_pred ccCCCcEEEcCCCCCccCCC-CCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEE
Confidence 34445889999998887443 332 678888888888888777788888888888888888887777788888888888
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCc-cCccccCccccCcccccccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQ-IPHEIGNLKLLDTVFLHINL 270 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~-~~~~~~~l~~L~~L~l~~N~ 270 (995)
+|++|+++ .+|.. .+++|++|+|++|++++. +|..|+++++|++|++++|+
T Consensus 106 ~Ls~N~l~-~lp~~---------------------------~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~ 157 (562)
T 3a79_B 106 DVSHNRLQ-NISCC---------------------------PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAK 157 (562)
T ss_dssp ECTTSCCC-EECSC---------------------------CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSB
T ss_pred ECCCCcCC-ccCcc---------------------------ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCc
Confidence 88888877 33322 345667777777777652 35677777777777777777
Q ss_pred ccCCCCccccCcCCC--CeEeccCCcC--cCcCCccccccC--CCCEEEccCCcCCCCCCc-cccCCCCcceEEeccCc-
Q 001922 271 LSGSIPKQLGNLTNL--VNLDLSNNAL--TGEIPYSFINLR--QLKLFNLFMNRLHGSIPD-YLADLPNLETLGLWQNN- 342 (995)
Q Consensus 271 l~~~~p~~l~~l~~L--~~L~Ls~N~l--~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~- 342 (995)
+++. .+..+++| ++|++++|.+ ++..|..|..+. .| .+++++|.+.+.+++ .+..+++|+.|++++|+
T Consensus 158 l~~~---~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~ 233 (562)
T 3a79_B 158 FRQL---DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDE 233 (562)
T ss_dssp CCTT---TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCST
T ss_pred cccC---chhhhhhceeeEEEeecccccccccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEeccccccc
Confidence 7643 34444555 8888888888 777888777755 33 567888888776554 46678899999999985
Q ss_pred ----ccccCCCcccCCCCCCeEEecCceecccC----CCcCcCCCccceeeccccccCCCCCccc-----ccCCCCcEEE
Q 001922 343 ----FTGVIPENLGQNGKLQVLDLSSNKLTGTI----PTDLCSSNQLRILILLKNFLFGPIPERL-----GACYSLTRVR 409 (995)
Q Consensus 343 ----l~~~~p~~~~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~l~~N~l~~~~p~~l-----~~l~~L~~L~ 409 (995)
+.+. ...+..+++|+.|+|++|.+++.. +..+ ...+|+.|++++|.+.|.+|..+ ..++.|+.++
T Consensus 234 ~~~~l~~~-~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~ 311 (562)
T 3a79_B 234 NCQRLMTF-LSELTRGPTLLNVTLQHIETTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEH 311 (562)
T ss_dssp THHHHHHH-HHHHHSCSSCEEEEEEEEEECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEE
T ss_pred ccchHHHH-HHHHhccCcceEEEecCCcCcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhcccccchheehhh
Confidence 3332 235778889999999988876432 1122 23489999999999999999988 7788888888
Q ss_pred ecCCccCCCCC-CCccc---CCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEc
Q 001922 410 LGQNYLNGSIP-DGFIY---LPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLL 485 (995)
Q Consensus 410 l~~N~l~~~~p-~~~~~---l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 485 (995)
++.|.+ .+| ..+.. -.+++.+++++|.+.... ....+++|++|++++|++++.+|..+.++++|+.|+|
T Consensus 312 ~~~~~~--~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~-----~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 384 (562)
T 3a79_B 312 VKNQVF--LFSKEALYSVFAEMNIKMLSISDTPFIHMV-----CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLIL 384 (562)
T ss_dssp EEECCC--SSCHHHHHHHHHTCCCSEEEEESSCCCCCC-----CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEEC
T ss_pred ccccee--ecChhhhhhhhccCcceEEEccCCCccccc-----CccCCCCceEEECCCCccccchhhhhcccCCCCEEEC
Confidence 888877 445 22222 267999999999986432 1246789999999999999999999999999999999
Q ss_pred CCCcccCC--CCCCccchhhhccccccccccCCCCCC-ccCcccccceeeccCCcccCCCccccccccccCeEecccccc
Q 001922 486 SGNQFSGP--IPPSIGELRQVLKLDLSRNSLSGEIPP-AIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHL 562 (995)
Q Consensus 486 s~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l 562 (995)
++|++++. +|..++.+++|+.|+|++|++++.+|. .+..+++|++|+|++|++++.+|..+. ++|++|+|++|+|
T Consensus 385 ~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l 462 (562)
T 3a79_B 385 QRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRI 462 (562)
T ss_dssp CSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCC
T ss_pred CCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcC
Confidence 99999963 356789999999999999999985665 588999999999999999988887765 7999999999999
Q ss_pred ccccCcccccCCcccEEeccCCCCCCCCCC-CCCCcccccccCCCCccCCCC
Q 001922 563 NQNIPKSIGSMKSLTIADFSFNDFSGKLPE-SGQFTVFNASSFAGNPQLCGT 613 (995)
Q Consensus 563 ~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~~c~~ 613 (995)
+ .+|..+..+++|+.|++++|++++.++. .+.+..+....+.|||+.|.+
T Consensus 463 ~-~ip~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 463 M-SIPKDVTHLQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp C-CCCTTTTSSCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred c-ccChhhcCCCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 7 5888888999999999999999964443 456677778889999999973
No 40
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-44 Score=407.00 Aligned_cols=266 Identities=20% Similarity=0.266 Sum_probs=202.7
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEec------CCc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSN------KET 757 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~ 757 (995)
++|+..+.||+|+||+||+|++ .+|+.||||++...... ....++.+|++++++++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5788999999999999999976 57999999999543322 234568899999999999999999999754 357
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+|||||+ |+|.+++. ..+.+++..+..++.||+.||.|||+++ ||||||||+|||++.++.+||+|||+|+.
T Consensus 134 ~~ivmE~~~-g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~---iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEEECCS-EEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEeCCC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCc---CcCCCcCccccccCCCCCEEEeecceeee
Confidence 899999996 68999995 3567999999999999999999999887 99999999999999999999999999987
Q ss_pred cccCC--CCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 838 LIDGG--ASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 838 ~~~~~--~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
+.... ........+||+.|+|||++.+. .++.++||||+||++|||++|+.||........+...............
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~ 287 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI 287 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence 64322 12234567899999999998875 4699999999999999999999999654322222222221111111000
Q ss_pred -----------hhhcCCcCCC----CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 915 -----------LSILDPRLSM----VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 915 -----------~~~~d~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+.+..+. ..+..+..+.+|+.+||+.||++|||++|++++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 288 QAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp C-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred hhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 0000111000 011234578899999999999999999999874
No 41
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=7.4e-44 Score=398.11 Aligned_cols=264 Identities=24% Similarity=0.270 Sum_probs=201.0
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCc
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKET 757 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 757 (995)
++.++|++.+.||+|+||+||+|+.+ +++.||+|++... ....++.+|+++++.+ +|||||+++++|.+.++
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 35578999999999999999999652 4688999998542 3356688999999998 69999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-CCeEEeeecccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA-FEAHVADFGLAK 836 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~-~~vkl~DfGla~ 836 (995)
.|+||||+++|+|.+++. .+++..++.++.|++.||+|||++| |+||||||+|||++.+ +.+||+|||+|+
T Consensus 95 ~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~g---IiHRDiKPeNiLl~~~~~~~kl~DFGla~ 166 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFG---IVHRDVKPSNFLYNRRLKKYALVDFGLAQ 166 (361)
T ss_dssp EEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCC---eEeCcCCHHHeEEeCCCCeEEECcCCCCc
Confidence 999999999999999994 3889999999999999999999888 9999999999999877 799999999998
Q ss_pred ccccCCC--------------------------CccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCC
Q 001922 837 FLIDGGA--------------------------SECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRP 889 (995)
Q Consensus 837 ~~~~~~~--------------------------~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~P 889 (995)
...+... .......+||+.|+|||++.+. .|+.++||||+||++|||++|+.|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 167 GTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp ECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred ccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 6543211 1112345799999999998775 489999999999999999999999
Q ss_pred CCCCCCCchHHHHHHHHhcCC-----------------------hhhhhhh---cCCcCC-------------CCCHHHH
Q 001922 890 VGDFGDGVDIVQWSKRATNGR-----------------------KEEFLSI---LDPRLS-------------MVPKEEA 930 (995)
Q Consensus 890 f~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~---~d~~~~-------------~~~~~~~ 930 (995)
|....+..+............ ....... .+...+ ......+
T Consensus 247 f~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is 326 (361)
T 4f9c_A 247 FYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVP 326 (361)
T ss_dssp SSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTCC
T ss_pred CCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccCC
Confidence 976554333222211111000 0000000 000000 0011234
Q ss_pred HHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 931 MHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 931 ~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.++.+++.+|++.||++|||++|++++
T Consensus 327 ~~a~DLl~~lL~~dP~~R~ta~eaL~H 353 (361)
T 4f9c_A 327 DEAYDLLDKLLDLNPASRITAEEALLH 353 (361)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHHTS
T ss_pred HHHHHHHHHHCcCChhHCcCHHHHhcC
Confidence 567899999999999999999999863
No 42
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.8e-42 Score=401.62 Aligned_cols=402 Identities=23% Similarity=0.256 Sum_probs=204.1
Q ss_pred CCCCCCeEeccCCcccCcc-ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceee
Q 001922 90 RLDKLTNLSLAGNNFTGSI-EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLD 168 (995)
Q Consensus 90 ~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 168 (995)
..++|++|++++|++.... .++++++|++|++++|.+.+..|..++.+.+|+.++++.|.. .++++|+
T Consensus 9 ~~~~L~~L~l~~n~l~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 9 SNTFLQEPLRHSSNLTEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred ccccchhhhcccCchhhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 3467777777777773222 477777777777777777777777777777777777766642 4578888
Q ss_pred ccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCC
Q 001922 169 LGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELD 248 (995)
Q Consensus 169 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~ 248 (995)
+++|.+++ +|.. .++|++|++++|++++ +|.. +++|++|++++|.+.. +|.. .++|++|++++|+++
T Consensus 78 l~~~~l~~-lp~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~--l~~~---~~~L~~L~L~~n~l~ 144 (454)
T 1jl5_A 78 LNNLGLSS-LPEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA--LSDL---PPLLEYLGVSNNQLE 144 (454)
T ss_dssp CTTSCCSC-CCSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC--CCSC---CTTCCEEECCSSCCS
T ss_pred ecCCcccc-CCCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc--ccCC---CCCCCEEECcCCCCC
Confidence 88888874 4442 3678888888888886 5543 2556666666554432 2211 145666666666666
Q ss_pred CccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCcccc
Q 001922 249 GQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLA 328 (995)
Q Consensus 249 ~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 328 (995)
+ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .|.++++|+.|++++|++++ +|...
T Consensus 145 ~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 145 K-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp S-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred C-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 4 44 36666666666666666653 33322 356666666666654 33 45566666666666666653 33221
Q ss_pred CCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEE
Q 001922 329 DLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRV 408 (995)
Q Consensus 329 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 408 (995)
++|++|++++|+++ .+|. ++.+++|++|++++|++++ +|.. +++|+.|++++|++
T Consensus 215 --~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l----------------- 269 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYL----------------- 269 (454)
T ss_dssp --TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCC-----------------
T ss_pred --CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcc-----------------
Confidence 35566666666555 3442 5555566666666665553 3322 24444455555544
Q ss_pred EecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCC-CCCcEEEcCC
Q 001922 409 RLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNF-SSLQILLLSG 487 (995)
Q Consensus 409 ~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~ 487 (995)
.+ +|.. +++|+.+++++|++++. |. .+++|++|++++|++++ ++ .+ ++|+.|++++
T Consensus 270 -------~~-l~~~---~~~L~~L~ls~N~l~~l-~~------~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~ 326 (454)
T 1jl5_A 270 -------TD-LPEL---PQSLTFLDVSENIFSGL-SE------LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSN 326 (454)
T ss_dssp -------SC-CCCC---CTTCCEEECCSSCCSEE-SC------CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCS
T ss_pred -------cc-cCcc---cCcCCEEECcCCccCcc-cC------cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCC
Confidence 43 2221 13444445555544431 11 11456777777777764 22 22 4677777777
Q ss_pred CcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccC--CCccccccccccCeEeccccccccc
Q 001922 488 NQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSG--SIPPEISNVRILNYLNLSRNHLNQN 565 (995)
Q Consensus 488 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~ip~~l~~l~~L~~L~L~~N~l~~~ 565 (995)
|++++ +|.. +++|+.|+|++|+++ .+|. .+++|++|+|++|++++ .+|.++.++ +.|.+.|.
T Consensus 327 N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~ 390 (454)
T 1jl5_A 327 NKLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAE 390 (454)
T ss_dssp SCCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC----
T ss_pred Ccccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhcccccc
Confidence 77774 5543 366777777777777 4665 36777777777777776 566655433 34555566
Q ss_pred cCcccccCCcccEEeccCCCCCC--CCCC
Q 001922 566 IPKSIGSMKSLTIADFSFNDFSG--KLPE 592 (995)
Q Consensus 566 ~p~~~~~l~~L~~l~ls~N~l~g--~~p~ 592 (995)
+|.. +++|+.|++++|+++| .+|.
T Consensus 391 i~~~---~~~L~~L~ls~N~l~~~~~iP~ 416 (454)
T 1jl5_A 391 VPEL---PQNLKQLHVETNPLREFPDIPE 416 (454)
T ss_dssp -----------------------------
T ss_pred cccc---cCcCCEEECCCCcCCccccchh
Confidence 6653 3567777777777776 5553
No 43
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-42 Score=406.50 Aligned_cols=390 Identities=21% Similarity=0.216 Sum_probs=267.3
Q ss_pred cccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhcccc
Q 001922 141 EVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYY 220 (995)
Q Consensus 141 ~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n 220 (995)
+.++.++++++.+ |. + .++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+
T Consensus 13 ~~~~c~~~~l~~l-p~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i------------------ 70 (455)
T 3v47_A 13 YNAICINRGLHQV-PE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVI------------------ 70 (455)
T ss_dssp TEEECCSSCCSSC-CC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEE------------------
T ss_pred cccCcCCCCcccC-CC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceE------------------
Confidence 3455666666553 33 2 256667777777666666666666666777776666665332
Q ss_pred ccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCcc--ccCcCCCCeEeccCCcCcCc
Q 001922 221 NVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQ--LGNLTNLVNLDLSNNALTGE 298 (995)
Q Consensus 221 ~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~ 298 (995)
.+..|.++++|++|+|++|++++..|..|+.+++|++|++++|++++.++.. +..+++|++|+|++|.+++.
T Consensus 71 ------~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 144 (455)
T 3v47_A 71 ------RNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI 144 (455)
T ss_dssp ------CTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC
T ss_pred ------CcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc
Confidence 1234455566666666666666555666666666666666666666533333 66666777777777776666
Q ss_pred CCcc-ccccCCCCEEEccCCcCCCCCCccccCC--CCcceEEeccCcccccCCCcc--------cCCCCCCeEEecCcee
Q 001922 299 IPYS-FINLRQLKLFNLFMNRLHGSIPDYLADL--PNLETLGLWQNNFTGVIPENL--------GQNGKLQVLDLSSNKL 367 (995)
Q Consensus 299 ~p~~-~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~p~~~--------~~l~~L~~L~L~~N~l 367 (995)
.|.. |.++++|+.|++++|++++..|..+..+ .+|+.|++++|.+++..+..+ ..+++|++|+|++|++
T Consensus 145 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l 224 (455)
T 3v47_A 145 QPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGF 224 (455)
T ss_dssp CCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCC
T ss_pred CcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcc
Confidence 5554 5666667777777766666666666554 566666666666665443332 2345566666666666
Q ss_pred cccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCC
Q 001922 368 TGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENG 447 (995)
Q Consensus 368 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~ 447 (995)
++..|..+... ....+|+.|++++|.+.+.... ...++. +....+.
T Consensus 225 ~~~~~~~~~~~---------------------~~~~~L~~L~l~~~~~~~~~~~-~~~~~~-----~~~~~~~------- 270 (455)
T 3v47_A 225 KESMAKRFFDA---------------------IAGTKIQSLILSNSYNMGSSFG-HTNFKD-----PDNFTFK------- 270 (455)
T ss_dssp CHHHHHHHHHH---------------------TTTCCEEEEECTTCTTTSCCTT-CCSSCC-----CCTTTTG-------
T ss_pred cccchhhhhcc---------------------ccccceeeEeeccccccccccc-hhhhcc-----Ccccccc-------
Confidence 55555444322 0013444444444443322110 000000 0000010
Q ss_pred CCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccc
Q 001922 448 NSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNH 527 (995)
Q Consensus 448 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 527 (995)
.....+|++|++++|++++..|..+.++++|+.|+|++|++++..|..|+.+++|+.|+|++|.+++..|..++.+++
T Consensus 271 --~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 271 --GLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp --GGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred --cccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 012357999999999999999999999999999999999999888999999999999999999999878899999999
Q ss_pred cceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCC
Q 001922 528 LTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESG 594 (995)
Q Consensus 528 L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~ 594 (995)
|++|+|++|++++..|.+|.++++|++|+|++|++++..+..+..+++|+.|++++|++++.+|...
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 415 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRID 415 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTTH
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCCcch
Confidence 9999999999998889999999999999999999998777778999999999999999999998643
No 44
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.4e-43 Score=410.84 Aligned_cols=250 Identities=23% Similarity=0.237 Sum_probs=200.4
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHH---HHHHHHhccCCCCceeEeEEEecCCcce
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFR---AEIQTLGNIRHRNIVRLLAFCSNKETNL 759 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~---~E~~~l~~l~hpniv~~~~~~~~~~~~~ 759 (995)
+.|+..++||+|+||+||+|+.+ +|+.||||++.+.. .......+. .++.+++.++|||||+++++|++.+..|
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 46888999999999999999764 68999999984321 111222333 3466777889999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 760 LVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
+|||||+||+|.+++.. .+.+++..++.++.||+.||+|||+++ ||||||||+|||++.+|.+||+|||+|+.+.
T Consensus 269 lVmEy~~GGdL~~~l~~--~~~l~E~~a~~y~~qIl~aL~yLH~~g---IiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQ--HGVFSEADMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEECCCCSCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999999964 456999999999999999999999777 9999999999999999999999999998764
Q ss_pred cCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.. ...+.+||+.|||||++.. ..|+.++||||+||++|||++|+.||...... +.......+...
T Consensus 344 ~~----~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~-~~~~i~~~i~~~--------- 409 (689)
T 3v5w_A 344 KK----KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK-DKHEIDRMTLTM--------- 409 (689)
T ss_dssp SC----CCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCC-CHHHHHHHHHHC---------
T ss_pred CC----CCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHhhcCC---------
Confidence 32 2345689999999999964 57999999999999999999999999653222 122222222111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHHH
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPR-----MREVVQM 957 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 957 (995)
. ...|...+..+.+++.+||+.||++|++ ++||.++
T Consensus 410 --~-~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~H 450 (689)
T 3v5w_A 410 --A-VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 450 (689)
T ss_dssp --C-CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTS
T ss_pred --C-CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcC
Confidence 0 1123445677899999999999999998 6887754
No 45
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=6.4e-42 Score=396.92 Aligned_cols=419 Identities=21% Similarity=0.233 Sum_probs=276.5
Q ss_pred CCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccc
Q 001922 67 RDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFD 144 (995)
Q Consensus 67 ~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~ 144 (995)
..++..++++++++ |.+|+.|+++++|++|++++|+++|.. .++++++|+.+++++|.. .++++|+
T Consensus 10 ~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~-----------~~l~~L~ 77 (454)
T 1jl5_A 10 NTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLD-----------RQAHELE 77 (454)
T ss_dssp -------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHH-----------HTCSEEE
T ss_pred cccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhc-----------cCCCEEE
Confidence 35788899999999 899999999999999999999998744 689999999999988864 5688999
Q ss_pred cccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhcccccccc
Q 001922 145 AYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFE 224 (995)
Q Consensus 145 Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~ 224 (995)
+++|+++++ |.. .++|++|++++|.+++ +|.. +++|++|++++|++++ +|.. .++|++|++++|.+..
T Consensus 78 l~~~~l~~l-p~~---~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~ 145 (454)
T 1jl5_A 78 LNNLGLSSL-PEL---PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK 145 (454)
T ss_dssp CTTSCCSCC-CSC---CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS
T ss_pred ecCCccccC-CCC---cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC
Confidence 999999984 442 4789999999999986 7754 4789999999999995 3322 2789999999877654
Q ss_pred CCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCcccc
Q 001922 225 GGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFI 304 (995)
Q Consensus 225 ~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 304 (995)
+| .++.+++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++++++|++|++++|++++ +|...
T Consensus 146 --lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~~~- 214 (454)
T 1jl5_A 146 --LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPDLP- 214 (454)
T ss_dssp --CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCCCC-
T ss_pred --Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCCCc-
Confidence 77 59999999999999999996 55543 589999999999997 56 69999999999999999996 44433
Q ss_pred ccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCcccee
Q 001922 305 NLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRIL 384 (995)
Q Consensus 305 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 384 (995)
++|+.|++++|+++ .+|. +..+++|++|++++|++++ +|.. .++|++|++++|++++ +|.. .++|+.|
T Consensus 215 --~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L 282 (454)
T 1jl5_A 215 --LSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFL 282 (454)
T ss_dssp --TTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEE
T ss_pred --CcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEE
Confidence 58999999999999 6774 8999999999999999996 5543 4789999999999995 6653 3677788
Q ss_pred eccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCC
Q 001922 385 ILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNN 464 (995)
Q Consensus 385 ~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N 464 (995)
++++|.+.+. |.. ..+|+.|++++|++++. + . .+++|++|++++|
T Consensus 283 ~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~i-~------------------------~------~~~~L~~L~Ls~N 327 (454)
T 1jl5_A 283 DVSENIFSGL-SEL---PPNLYYLNASSNEIRSL-C------------------------D------LPPSLEELNVSNN 327 (454)
T ss_dssp ECCSSCCSEE-SCC---CTTCCEEECCSSCCSEE-C------------------------C------CCTTCCEEECCSS
T ss_pred ECcCCccCcc-cCc---CCcCCEEECcCCcCCcc-c------------------------C------CcCcCCEEECCCC
Confidence 8888877651 111 14566666666666531 1 0 1246888888888
Q ss_pred cccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCC--CCCCccCcccccceeeccCCcccCCC
Q 001922 465 LLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSG--EIPPAIGYCNHLTYLDMSQNNLSGSI 542 (995)
Q Consensus 465 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~i 542 (995)
++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|+|++|++++ .+|.+++.+ +.|.+.|.+
T Consensus 328 ~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L--------~~n~~~~~i 391 (454)
T 1jl5_A 328 KLIE-LPAL---PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESVEDL--------RMNSHLAEV 391 (454)
T ss_dssp CCSC-CCCC---CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTCCEE--------ECCC-----
T ss_pred cccc-cccc---CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHHHhh--------hhccccccc
Confidence 8885 5554 578899999999998 4666 46789999999999987 677766543 457777888
Q ss_pred ccccccccccCeEecccccccc--ccCcccccCCcccEEeccCCCCCCCCCC
Q 001922 543 PPEISNVRILNYLNLSRNHLNQ--NIPKSIGSMKSLTIADFSFNDFSGKLPE 592 (995)
Q Consensus 543 p~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 592 (995)
|.. +++|+.|+|++|++++ .+|.+ ++.|.+.+|.+.+.+|.
T Consensus 392 ~~~---~~~L~~L~ls~N~l~~~~~iP~s------l~~L~~~~~~~~~~~~~ 434 (454)
T 1jl5_A 392 PEL---PQNLKQLHVETNPLREFPDIPES------VEDLRMNSERVVDPYEF 434 (454)
T ss_dssp ----------------------------------------------------
T ss_pred ccc---cCcCCEEECCCCcCCccccchhh------HhheeCcCcccCCcccc
Confidence 864 5788999999999987 66644 55667888888888774
No 46
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1e-42 Score=412.61 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=209.3
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.++|++.+.||+|+||+||+|+. .+|+.||+|++... .....+.+.+|+++|+.++|||||+++++|.+.+..|+||
T Consensus 155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~-~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~ 233 (573)
T 3uto_A 155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP-HESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIY 233 (573)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEE
T ss_pred CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc-chhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence 456899999999999999999976 46899999998542 2334567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC--CCeEEeeecccccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA--FEAHVADFGLAKFLID 840 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~--~~vkl~DfGla~~~~~ 840 (995)
|||+||+|.+++.. ....+++..+..++.||+.||.|||+++ |+||||||+|||++.+ +.+||+|||+|+.+.+
T Consensus 234 E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~---iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~ 309 (573)
T 3uto_A 234 EFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENN---YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP 309 (573)
T ss_dssp ECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCSSCEECCT
T ss_pred eecCCCcHHHHHHH-hCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhccccCCCCCCEEEeeccceeEccC
Confidence 99999999999963 3457899999999999999999999887 9999999999999854 8999999999998743
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
. ......+||+.|||||++.+..|+.++||||+||++|||++|+.||.+... .+....+...... +.
T Consensus 310 ~---~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~----~~~~~~i~~~~~~-----~~- 376 (573)
T 3uto_A 310 K---QSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGEND----DETLRNVKSCDWN-----MD- 376 (573)
T ss_dssp T---SEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHHTTCCC-----CC-
T ss_pred C---CceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH----HHHHHHHHhCCCC-----CC-
Confidence 2 334567899999999999999999999999999999999999999965322 2222222221100 00
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.......+..+.+||.+||+.||++||+++|++++
T Consensus 377 --~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~H 411 (573)
T 3uto_A 377 --DSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEH 411 (573)
T ss_dssp --SGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --cccccCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 00112345668899999999999999999999884
No 47
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-41 Score=378.23 Aligned_cols=276 Identities=35% Similarity=0.583 Sum_probs=229.0
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+..++|+..+.||+|+||+||+|++.+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 114 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE-SSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY 114 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC-CSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred HHHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence 345689999999999999999999888999999998543 3445677999999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 763 EYMRNGSLGEALHGKK--GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||+++|+|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 191 (321)
T 2qkw_B 115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTE 191 (321)
T ss_dssp ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCSTTEEECTTCCEEECCCTTCEECSS
T ss_pred EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 9999999999996533 235899999999999999999999887 99999999999999999999999999987543
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCC--CchHHHHHHHHhcCChhhhhhhc
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGD--GVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
...........||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......|....... ..+...+
T Consensus 192 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 269 (321)
T 2qkw_B 192 LDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN--GQLEQIV 269 (321)
T ss_dssp SSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTT--TCCCSSS
T ss_pred ccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhcccc--ccHHHhc
Confidence 3333333455689999999999989999999999999999999999999976432 22334443332222 2233444
Q ss_pred CCcC-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 919 DPRL-SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 919 d~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
++.. ...+.+.+..+.+++.+||+.||++||+++|+++.|+.+.+.
T Consensus 270 ~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~ 316 (321)
T 2qkw_B 270 DPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRL 316 (321)
T ss_dssp SSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHS
T ss_pred ChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhc
Confidence 4444 346778999999999999999999999999999999977543
No 48
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.2e-41 Score=375.82 Aligned_cols=293 Identities=28% Similarity=0.459 Sum_probs=170.6
Q ss_pred ccccchHHHHHHHHHhCCCCCCCCCCCCCCCCCCCce--eeeEEeCC----CceeeeecCCCCccc--cCCccccCCCCC
Q 001922 23 ASLVNDFHVLVALKQGFENPEPALISWNSSNPSSVCS--WAGICCSR----DRVASLDLTDLNLCG--SVPAQILRLDKL 94 (995)
Q Consensus 23 ~~~~~~~~~Ll~~k~~~~~~~~~l~~W~~~~~~~~C~--w~gv~C~~----~~v~~l~l~~~~l~~--~~~~~~~~l~~L 94 (995)
.|.+.|++||++||+++.||. .+++|+.+ ++||. |.||+|+. ++|+.|+|++++++| .+|+.+.++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~~--~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLPT--TDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCTT--SCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCCC--CCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 466789999999999999886 79999764 57898 99999975 578888888888877 677666555555
Q ss_pred CeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccc
Q 001922 95 TNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYF 174 (995)
Q Consensus 95 ~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l 174 (995)
++|+|++ .|.+.+.+|..|.++++|++|++++|++++.+|..|.++++|++|+|++|.+
T Consensus 79 ~~L~L~~---------------------~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 137 (313)
T 1ogq_A 79 NFLYIGG---------------------INNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNAL 137 (313)
T ss_dssp SEEEEEE---------------------ETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEE
T ss_pred CeeeCCC---------------------CCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCcc
Confidence 5555542 2444444455555555555555555555555566666666666666666666
Q ss_pred cccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCcc
Q 001922 175 FGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHE 254 (995)
Q Consensus 175 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~ 254 (995)
++.+|..|+.+++|++|+|++|++++.+|..+++++ ++|++|++++|++++.+|..
T Consensus 138 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~------------------------~~L~~L~L~~N~l~~~~~~~ 193 (313)
T 1ogq_A 138 SGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS------------------------KLFTSMTISRNRLTGKIPPT 193 (313)
T ss_dssp ESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC------------------------TTCCEEECCSSEEEEECCGG
T ss_pred CCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh------------------------hcCcEEECcCCeeeccCChH
Confidence 666666666666666666666666654444333221 14555555555555555554
Q ss_pred ccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcc
Q 001922 255 IGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLE 334 (995)
Q Consensus 255 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 334 (995)
+..++ |+.|++++|++++.+|..+..+++|+.|+|++|.+++.+|. +..+++|+.|++++|++++.+|..+..+++|+
T Consensus 194 ~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 271 (313)
T 1ogq_A 194 FANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLH 271 (313)
T ss_dssp GGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCC
T ss_pred HhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCC
Confidence 44443 44455555554444455555555555555555555543332 44444444444444444444444444444444
Q ss_pred eEEeccCcccccCCCcccCCCCCCeEEecCce
Q 001922 335 TLGLWQNNFTGVIPENLGQNGKLQVLDLSSNK 366 (995)
Q Consensus 335 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 366 (995)
.|+|++|++++.+|.. ..+++|+.|++++|+
T Consensus 272 ~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 272 SLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp EEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred EEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 4444444444444433 344444444444444
No 49
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.3e-41 Score=375.65 Aligned_cols=278 Identities=40% Similarity=0.687 Sum_probs=226.3
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
....++|+..+.||+|+||.||+|+..+++.||||++...........+.+|++++++++||||+++++++.+++..++|
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 105 (326)
T 3uim_A 26 QVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLV 105 (326)
T ss_dssp HTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEE
T ss_pred HHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEE
Confidence 33467899999999999999999998889999999986554444455789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 762 YEYMRNGSLGEALHGKK--GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
|||+++|+|.+++.... ...+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 99999999999997543 3458999999999999999999998822239999999999999999999999999998764
Q ss_pred cCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCC----CCCCchHHHHHHHHhcCChhhhh
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGD----FGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~----~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
... ........||+.|+|||++.+..++.++||||+|+++|+|++|+.||.. .........|....... ....
T Consensus 186 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 262 (326)
T 3uim_A 186 YKD-THVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE--KKLE 262 (326)
T ss_dssp SSS-SCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSS--CCST
T ss_pred ccc-ccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhc--hhhh
Confidence 332 2223455699999999999988999999999999999999999999952 22334444554433332 2233
Q ss_pred hhcCCcC-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 916 SILDPRL-SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 916 ~~~d~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
...+... ...+...+..+.+++.+||+.||++|||++||+++|++..
T Consensus 263 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp TSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred hhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence 3344433 3467788999999999999999999999999999998743
No 50
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=2.4e-41 Score=382.54 Aligned_cols=261 Identities=24% Similarity=0.373 Sum_probs=215.1
Q ss_pred HhhccCCCeeeccCceEEEEEEe--------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM--------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNK 755 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~--------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 755 (995)
.++|+..+.||+|+||.||+|++ .++..||||++.........+.+.+|+.+++++ +||||+++++++.+.
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 35788899999999999999975 245679999986544444456789999999999 899999999999999
Q ss_pred CcceEEEEeccCCChhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKK--------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL 821 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill 821 (995)
+..|+||||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+||++
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchhhEEE
Confidence 99999999999999999997532 235789999999999999999999887 9999999999999
Q ss_pred CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHH
Q 001922 822 NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIV 900 (995)
Q Consensus 822 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~ 900 (995)
+.++.+||+|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...
T Consensus 237 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~-~~~ 315 (370)
T 2psq_A 237 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVE-ELF 315 (370)
T ss_dssp CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHH
T ss_pred CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHH-HHH
Confidence 9999999999999987655443333345567889999999999999999999999999999999 99999653321 111
Q ss_pred HHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 901 QWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
..+... .....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 316 ---~~~~~~-----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~ 364 (370)
T 2psq_A 316 ---KLLKEG-----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 364 (370)
T ss_dssp ---HHHHTT-----------CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred ---HHHhcC-----------CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 111111 1122344566789999999999999999999999999988653
No 51
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.2e-40 Score=386.51 Aligned_cols=364 Identities=21% Similarity=0.207 Sum_probs=236.8
Q ss_pred ccCCccccCCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCC
Q 001922 82 GSVPAQILRLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKL 161 (995)
Q Consensus 82 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l 161 (995)
+..+..++++++|++|++++|.+++...++.+++|++|+|++|+|+++. ++.+++|++|++++|+++++ | ++++
T Consensus 32 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~l~~l~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~--~~~l 105 (457)
T 3bz5_A 32 ATDTISEEQLATLTSLDCHNSSITDMTGIEKLTGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D--VTPL 105 (457)
T ss_dssp TTSEEEHHHHTTCCEEECCSSCCCCCTTGGGCTTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C--CTTC
T ss_pred cccccChhHcCCCCEEEccCCCcccChhhcccCCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e--cCCC
Confidence 3344566777778888888888777656777778888888888777752 67777777777777777774 3 6777
Q ss_pred CCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEE
Q 001922 162 EKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLD 241 (995)
Q Consensus 162 ~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~ 241 (995)
++|++|+|++|++++ +| ++.+++|++|++++|++++. + ++++++ |++|+
T Consensus 106 ~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~-------------------------L~~L~ 154 (457)
T 3bz5_A 106 TKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQ-------------------------LTELD 154 (457)
T ss_dssp TTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTT-------------------------CCEEE
T ss_pred CcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCc-------------------------CCEEE
Confidence 777777777777765 33 67777777777777777753 1 444444 45555
Q ss_pred CcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCC
Q 001922 242 LSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHG 321 (995)
Q Consensus 242 Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 321 (995)
+++|+..+.+ .+..+++|+.|++++|++++ +| +..+++|+.|++++|.+++. .+..+++|+.|++++|++++
T Consensus 155 l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~ 226 (457)
T 3bz5_A 155 CHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE 226 (457)
T ss_dssp CTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC
T ss_pred CCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc
Confidence 5555333333 24455555555555555554 23 55566666666666666643 25566666666666666665
Q ss_pred CCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCccccc
Q 001922 322 SIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGA 401 (995)
Q Consensus 322 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~ 401 (995)
+| +..+++|+.|++++|++++.. ++.+++|+.|++++|+ |+.|++++|.+.+.+| ++.
T Consensus 227 -ip--~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~n~~~~~~~--~~~ 284 (457)
T 3bz5_A 227 -ID--VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTHNTQLIYFQ--AEG 284 (457)
T ss_dssp -CC--CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTTCTTCCEEE--CTT
T ss_pred -cC--ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCCCccCCccc--ccc
Confidence 34 556666666666666666542 3445566666666553 3455666666666555 356
Q ss_pred CCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCc
Q 001922 402 CYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQ 481 (995)
Q Consensus 402 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 481 (995)
+++|+.|++++|.+.+.+|.. .+.|+.+++++| ++|++|++++|++++. + ++++++|+
T Consensus 285 l~~L~~L~Ls~n~~l~~l~~~---~~~L~~L~l~~~----------------~~L~~L~L~~N~l~~l-~--l~~l~~L~ 342 (457)
T 3bz5_A 285 CRKIKELDVTHNTQLYLLDCQ---AAGITELDLSQN----------------PKLVYLYLNNTELTEL-D--VSHNTKLK 342 (457)
T ss_dssp CTTCCCCCCTTCTTCCEEECT---TCCCSCCCCTTC----------------TTCCEEECTTCCCSCC-C--CTTCTTCS
T ss_pred cccCCEEECCCCcccceeccC---CCcceEechhhc----------------ccCCEEECCCCccccc-c--cccCCcCc
Confidence 677777777777766666542 234444444333 4678888888888863 3 77888888
Q ss_pred EEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccc
Q 001922 482 ILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEIS 547 (995)
Q Consensus 482 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 547 (995)
.|++++|+|++ ++.|..|++++|.++|. +.+..|..++|++|+++|.+|..+.
T Consensus 343 ~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 343 SLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp EEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred EEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 88888888875 24567778888888764 4566777888888888888877654
No 52
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=1.1e-40 Score=389.58 Aligned_cols=352 Identities=21% Similarity=0.196 Sum_probs=207.4
Q ss_pred CCCCeEeccCCcccCcc--ccCcccccceeccccccccCC-CcccccccccccccccccccccccCCccccCCCCCceee
Q 001922 92 DKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGG-LDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLD 168 (995)
Q Consensus 92 ~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~-~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 168 (995)
++|++|+|++|++++.. .+.++++|++|+|++|.+.+. .+..|.++++|++|+|++|++++..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 45555666665555432 355555666666666555432 244555556666666666666555555555566666666
Q ss_pred ccCccccccCCcc--ccCCCCCceeeccCCcccccCccc-ccchhhhhhhhccccccccCCCCcccCCC--CcccEEECc
Q 001922 169 LGGNYFFGKIPNS--YGELQGLEYLSLAGNDLTGKIPGE-LGNLTNLREIYLGYYNVFEGGIPREVGKL--VNLVHLDLS 243 (995)
Q Consensus 169 L~~N~l~~~~p~~--l~~l~~L~~L~Ls~N~l~~~~~~~-l~~l~~L~~L~L~~n~~~~~~~p~~~~~l--~~L~~L~Ls 243 (995)
|++|.+++.+|.. |+.+++|++|+|++|++++..|.. ++++++|++|++++|.+ .+..+..+..+ .+|+.|+++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l-~~~~~~~l~~l~~~~L~~L~l~ 188 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKV-KSICEEDLLNFQGKHFTLLRLS 188 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCB-SCCCTTTSGGGTTCEEEEEECT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcc-cccChhhhhccccccccccccc
Confidence 6666555433333 555556666666666665554544 55556666666654433 22334444443 456666666
Q ss_pred CCCCCCccCccc--------cCccccCccccccccccCCCCccccCc---CCCCeEeccCCcCcCc----------CCcc
Q 001922 244 SCELDGQIPHEI--------GNLKLLDTVFLHINLLSGSIPKQLGNL---TNLVNLDLSNNALTGE----------IPYS 302 (995)
Q Consensus 244 ~n~l~~~~~~~~--------~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~----------~p~~ 302 (995)
+|.+.+..+..+ ..+++|++|++++|++++..|..+... ++|+.|++++|.+.+. .+..
T Consensus 189 ~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~ 268 (455)
T 3v47_A 189 SITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFT 268 (455)
T ss_dssp TCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTT
T ss_pred cCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccc
Confidence 666654433322 244556666666666655555544433 5566666665543321 1222
Q ss_pred cccc--CCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCc
Q 001922 303 FINL--RQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQ 380 (995)
Q Consensus 303 ~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 380 (995)
+..+ ++|+.|++++|++.+..|..+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..+++
T Consensus 269 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 348 (455)
T 3v47_A 269 FKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDK 348 (455)
T ss_dssp TGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTT
T ss_pred cccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCccc
Confidence 2222 46667777777776666666666777777777777776666666666677777777777776666666666677
Q ss_pred cceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCC
Q 001922 381 LRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLP 444 (995)
Q Consensus 381 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~ 444 (995)
|+.|++++|++.+..|..+..+++|++|++++|++++..+..|..+++|+.+++++|.+++..|
T Consensus 349 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 349 LEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred CCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 7777777777766666667777777777777777766666666667777777777777766554
No 53
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.6e-41 Score=375.62 Aligned_cols=267 Identities=27% Similarity=0.397 Sum_probs=213.8
Q ss_pred HhhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
..+|+..+.||+|+||+||+|++. .+..||||++.........+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 357888899999999999999874 3456999999655445556679999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 128 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 203 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLED 203 (325)
T ss_dssp EEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCSSCEECC-
T ss_pred EeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEECCCCCEEECCCCccccccc
Confidence 99999999999999643 456899999999999999999999887 99999999999999999999999999987644
Q ss_pred CCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 841 GGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 841 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+...
T Consensus 204 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~----~~~~~~~~~--------- 270 (325)
T 3kul_A 204 DPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR----DVISSVEEG--------- 270 (325)
T ss_dssp ---CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH----HHHHHHHTT---------
T ss_pred CccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH----HHHHHHHcC---------
Confidence 3221 12233456788999999998899999999999999999999 99999653221 122222111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCccccc
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSDFNQ 970 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 970 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.+.......
T Consensus 271 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~~~~~ 320 (325)
T 3kul_A 271 --YRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPESLRA 320 (325)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC----
T ss_pred --CCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcccccc
Confidence 11122334567899999999999999999999999999998766554433
No 54
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=1e-39 Score=360.37 Aligned_cols=277 Identities=35% Similarity=0.571 Sum_probs=228.3
Q ss_pred HHHHHhhccCC------CeeeccCceEEEEEEeCCCcEEEEEEecCCC---CCChhHHHHHHHHHHhccCCCCceeEeEE
Q 001922 681 VSDILECVKDG------NVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG---THSHDHGFRAEIQTLGNIRHRNIVRLLAF 751 (995)
Q Consensus 681 ~~~~~~~~~~~------~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 751 (995)
+..++..|... +.||+|+||.||+|+. +++.||||++.... .....+.+.+|+.++++++||||++++++
T Consensus 20 l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~ 98 (307)
T 2nru_A 20 LKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGF 98 (307)
T ss_dssp HHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred HHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEE
Confidence 34445555544 8999999999999987 68899999985432 23345678999999999999999999999
Q ss_pred EecCCcceEEEEeccCCChhhhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 752 CSNKETNLLVYEYMRNGSLGEALHGK-KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 752 ~~~~~~~~lv~e~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
+.+.+..++||||+++|+|.+++... ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 99 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~ 175 (307)
T 2nru_A 99 SSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENH---HIHRDIKSANILLDEAFTAKIS 175 (307)
T ss_dssp ECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEEC
T ss_pred EecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEcCCCcEEEe
Confidence 99999999999999999999998643 2356899999999999999999999887 9999999999999999999999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR 910 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 910 (995)
|||+++...............||+.|+|||.+.+ .++.++||||||+++|+|++|+.||...........+.......
T Consensus 176 Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~- 253 (307)
T 2nru_A 176 DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDE- 253 (307)
T ss_dssp CCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTT-
T ss_pred ecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhh-
Confidence 9999987644333333345679999999998765 58899999999999999999999998765554444444443332
Q ss_pred hhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 911 KEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 911 ~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
...+.+.+++.....+...+..+.+++.+||+.||++||+++++++.|+++..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 254 EKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp SCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred hhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 23345666677777788899999999999999999999999999999998754
No 55
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.1e-41 Score=374.79 Aligned_cols=254 Identities=23% Similarity=0.330 Sum_probs=201.6
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
+++.++|+..+.||+|+||+||+|+. .+|+.||||++...........+.+|++++++++||||+++++++.+.+..++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 34567899999999999999999976 57899999998655444456678999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||++++++.+||+|||++.....
T Consensus 86 v~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~ 160 (347)
T 3zgw_A 86 VLEYCPGGELFDYIIS--QDRLSEEETRVVFRQIVSAVAYVHSQG---YAHRDLKPENLLFDEYHKLKLIDFGLCAKPKG 160 (347)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBC---
T ss_pred EEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCccHHHEEEcCCCCEEEEeccCcccccC
Confidence 9999999999999963 346899999999999999999999887 99999999999999999999999999886543
Q ss_pred CCCCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
.. .......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||... ........+..+..
T Consensus 161 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~----~~~~~~~~i~~~~~-------- 227 (347)
T 3zgw_A 161 NK-DYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDD----NVMALYKKIMRGKY-------- 227 (347)
T ss_dssp ------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHHTCC--------
T ss_pred CC-CccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCC----CHHHHHHHHHcCCC--------
Confidence 22 222345679999999999988775 89999999999999999999999642 22222222222111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...+..+.+++.+||+.||++|||++|+++.
T Consensus 228 ----~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 228 ----DVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred ----CCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 1223345668889999999999999999999974
No 56
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.5e-40 Score=362.90 Aligned_cols=252 Identities=23% Similarity=0.330 Sum_probs=208.4
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
..++|+..+.||+|+||+||+|+. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..++..++||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 96 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVM 96 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccc-ccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEE
Confidence 356899999999999999999975 578999999985432 334567899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++... .+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 97 e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (297)
T 3fxz_A 97 EYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 170 (297)
T ss_dssp ECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred ECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc
Confidence 999999999999643 5889999999999999999999887 9999999999999999999999999998764432
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||............. ... .+.
T Consensus 171 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~---~~~---------~~~- 235 (297)
T 3fxz_A 171 S--KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA---TNG---------TPE- 235 (297)
T ss_dssp C--CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH---HHC---------SCC-
T ss_pred c--ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH---hCC---------CCC-
Confidence 2 2345679999999999999999999999999999999999999996532211111111 110 000
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 236 ~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h 270 (297)
T 3fxz_A 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 270 (297)
T ss_dssp CSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11234456678999999999999999999999863
No 57
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-41 Score=384.11 Aligned_cols=259 Identities=26% Similarity=0.380 Sum_probs=211.4
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+..+.||+|+||+||+|++. +++.||||++.........+.+.+|++++++++||||+++++++.+.+..|+||||
T Consensus 114 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 193 (377)
T 3cbl_A 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMEL 193 (377)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEc
Confidence 56888899999999999999875 78999999986443333345688999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++|+|.+++.. .+..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++...+....
T Consensus 194 ~~~g~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 194 VQGGDFLTFLRT-EGARLRVKTLLQMVGDAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CTTCBHHHHHHH-HGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred CCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 999999999973 3446899999999999999999999887 999999999999999999999999999865332221
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||...... +....+..+ ...
T Consensus 270 ~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~----~~~~~~~~~-----------~~~ 334 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ----QTREFVEKG-----------GRL 334 (377)
T ss_dssp CCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH----HHHHHHHTT-----------CCC
T ss_pred ecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcC-----------CCC
Confidence 11122346778999999998899999999999999999998 99999654321 111111111 011
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
..+..++..+.+++.+||+.||++|||++++++.|+++.+
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~ 374 (377)
T 3cbl_A 335 PCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374 (377)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHh
Confidence 1234456778999999999999999999999999988753
No 58
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.5e-40 Score=359.31 Aligned_cols=260 Identities=22% Similarity=0.391 Sum_probs=213.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
.++|+..+.||+|+||+||+|+..++..||+|++.... ...+.+.+|++++++++||||+++++++.+....++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 35788899999999999999999888899999985432 2356789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++++|.+++... +..+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++........
T Consensus 85 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQ---FIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY- 159 (268)
T ss_dssp CTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE-
T ss_pred cCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCcceEEECCCCCEEEccCccceecchhhh-
Confidence 9999999999642 345899999999999999999999887 99999999999999999999999999987644322
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||...... ......... ...
T Consensus 160 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~----~~~~~~~~~-----------~~~ 224 (268)
T 3sxs_A 160 VSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS----EVVLKVSQG-----------HRL 224 (268)
T ss_dssp EECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHHHHTT-----------CCC
T ss_pred hcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH----HHHHHHHcC-----------CCC
Confidence 22234456778999999998899999999999999999999 99999643221 111111111 111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
..+...+..+.+++.+||+.||++|||++|+++.|+++.+...
T Consensus 225 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~k 267 (268)
T 3sxs_A 225 YRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKDK 267 (268)
T ss_dssp CCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC---
T ss_pred CCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhccC
Confidence 1223345678999999999999999999999999999987653
No 59
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=7.5e-41 Score=371.67 Aligned_cols=269 Identities=25% Similarity=0.325 Sum_probs=208.0
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCc----ceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET----NLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~lv 761 (995)
.+|+..+.||+|+||+||+|++. ++.||||++... ......+..|+.++++++||||+++++++.+... .++|
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ--DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG--GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC--chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 46888999999999999999874 789999998432 2234456678999999999999999999977543 6999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc----------CCCCeEecCCCCCCEEECCCCCeEEee
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD----------CSPLIVHRDVKSNNILLNSAFEAHVAD 831 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~----------~~~~iiHrDlkp~Nill~~~~~vkl~D 831 (995)
|||+++|+|.+++... .+++..++.++.|++.||+|||+. + |+||||||+||+++.++.+||+|
T Consensus 101 ~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~---ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 101 TAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPA---ISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECE---EECSCCSGGGEEECTTCCEEECC
T ss_pred EecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCC---EEeCCCChHhEEECCCCeEEEcc
Confidence 9999999999999643 489999999999999999999976 6 99999999999999999999999
Q ss_pred eccccccccCCCCccccccccCccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 832 FGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT-----LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 832 fGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
||+++.+.............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+...........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 999987655443333445679999999999876 356678999999999999999999997643322111000000
Q ss_pred hcCChhhhhhhc-----CCcCCC--CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 907 TNGRKEEFLSIL-----DPRLSM--VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 907 ~~~~~~~~~~~~-----d~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
............ .+.... .....+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~ 318 (322)
T 3soc_A 255 QHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318 (322)
T ss_dssp SSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 000011111111 111111 123567779999999999999999999999999998764
No 60
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2.3e-40 Score=367.52 Aligned_cols=249 Identities=23% Similarity=0.341 Sum_probs=207.3
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
..+|+..+.||+|+||.||+|++ .+|+.||||++.... .....+++.+|++++++++||||+++++++.+.+..|+||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35688899999999999999986 679999999985432 2334566889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 94 e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 94 EYASGGEVFDYLVA--HGRMKEKEARSKFRQIVSAVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp CCCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred ECCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999999964 346899999999999999999999887 999999999999999999999999999876433
Q ss_pred CCccccccccCcccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVD-EKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......+||+.|+|||++.+..+. .++||||+||++|||++|+.||... +.......+..+.
T Consensus 168 --~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~----~~~~~~~~i~~~~----------- 230 (328)
T 3fe3_A 168 --GKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ----NLKELRERVLRGK----------- 230 (328)
T ss_dssp --CGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHHCC-----------
T ss_pred --CccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC----CHHHHHHHHHhCC-----------
Confidence 233566899999999999888775 7999999999999999999999643 2222222222211
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...|...+..+.+++.+||+.||++|||++|+++.
T Consensus 231 -~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 231 -YRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp -CCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred -CCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 11233345678899999999999999999999874
No 61
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=7.9e-41 Score=378.48 Aligned_cols=261 Identities=28% Similarity=0.419 Sum_probs=202.3
Q ss_pred hhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.+|+..+.||+|+||.||+|+.. ++..||||++.........+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 57889999999999999999764 57789999986544444566799999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. .+..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 125 ~e~~~~~sL~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 125 TEYMENGSLDSFLRK-HDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EECCTTCBHHHHHHT-TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 999999999999974 3456899999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCc-cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 842 GASE-CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 842 ~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
.... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||..... .+....+...
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~----~~~~~~i~~~---------- 266 (373)
T 2qol_A 201 PEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----QDVIKAVDEG---------- 266 (373)
T ss_dssp -------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH----HHHHHHHHTT----------
T ss_pred CccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC----------
Confidence 2111 1122345778999999999999999999999999999998 9999965422 1122222111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 267 -~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 267 -YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -EECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -CCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 001123345677999999999999999999999999999886543
No 62
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.1e-40 Score=360.48 Aligned_cols=256 Identities=23% Similarity=0.435 Sum_probs=212.4
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||+||+|++.+++.||+|++... ....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--SBCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--ccCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 468888999999999999999988999999998543 233567999999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++++|.+++.. ....+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 88 ~~~~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-~~ 162 (269)
T 4hcu_A 88 EHGCLSDYLRT-QRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 162 (269)
T ss_dssp TTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHHh-cCcccCHHHHHHHHHHHHHHHHHHHhCC---eecCCcchheEEEcCCCCEEeccccccccccccc-cc
Confidence 99999999974 3456899999999999999999999887 9999999999999999999999999998653321 11
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......+... ....
T Consensus 163 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~----~~~~~~~~~~-----------~~~~ 227 (269)
T 4hcu_A 163 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN----SEVVEDISTG-----------FRLY 227 (269)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTT-----------CCCC
T ss_pred cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH----HHHHHHHhcC-----------ccCC
Confidence 2234456788999999998999999999999999999999 9999965322 2222222211 1112
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.+...+..+.+++.+||+.||++||+++|++++|+++.+
T Consensus 228 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 228 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 266 (269)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHH
Confidence 233345678999999999999999999999999998754
No 63
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=4.8e-40 Score=362.29 Aligned_cols=265 Identities=29% Similarity=0.421 Sum_probs=208.2
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+..+.||+|+||+||+|++. ..+|+|.++.... ....+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 46788899999999999999864 3689988754332 233467889999999999999999999875 4568999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++++|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++........
T Consensus 113 ~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~ 188 (307)
T 3lb7_A 113 CEGSSLYKHLHV-QETKFQMFQLIDIARQTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp CSSCBHHHHHHT-SCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCSSSEEECTTSCEEECCCCSSCC-------
T ss_pred CCCCcHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCChhhEEEcCCCCEEEccCCCceeccccccc
Confidence 999999999974 3467899999999999999999999887 999999999999999999999999999865433333
Q ss_pred ccccccccCcccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 845 ECMSAIAGSYGYIAPEYAY---TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
.......||+.|+|||++. +..++.++|||||||++|||++|+.||................ ...+.
T Consensus 189 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~----------~~~~~ 258 (307)
T 3lb7_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRG----------YASPD 258 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHT----------CCCCC
T ss_pred ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcC----------CCCcc
Confidence 3344567999999999986 5678899999999999999999999997654433322222111 11222
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcc
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSD 967 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 967 (995)
.......++..+.+++.+||+.+|++||+++|+++.|+.+....+.
T Consensus 259 ~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~pk 304 (307)
T 3lb7_A 259 LSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSLPK 304 (307)
T ss_dssp STTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTCCC
T ss_pred hhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhccc
Confidence 2223344567899999999999999999999999999988766543
No 64
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=372.05 Aligned_cols=264 Identities=25% Similarity=0.400 Sum_probs=215.1
Q ss_pred HhhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|+.++++++||||+++++++.+.+..
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 125 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPM 125 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSC
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCce
Confidence 457888999999999999999864 34789999986544444456789999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCC----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 001922 759 LLVYEYMRNGSLGEALHGKK----------------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKS 816 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp 816 (995)
++||||+++|+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp 202 (343)
T 1luf_A 126 CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERK---FVHRDLAT 202 (343)
T ss_dssp EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSG
T ss_pred EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCc
Confidence 99999999999999997532 256899999999999999999999887 99999999
Q ss_pred CCEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 001922 817 NNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGD 895 (995)
Q Consensus 817 ~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~ 895 (995)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||.....
T Consensus 203 ~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 282 (343)
T 1luf_A 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH 282 (343)
T ss_dssp GGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH
T ss_pred ceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh
Confidence 999999999999999999987644333333345678899999999998899999999999999999999 9999965321
Q ss_pred CchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 896 GVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.+....+... .....+..++..+.+++.+||+.||++||+++|+++.|+++.....
T Consensus 283 ----~~~~~~~~~~-----------~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~~ 338 (343)
T 1luf_A 283 ----EEVIYYVRDG-----------NILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERAE 338 (343)
T ss_dssp ----HHHHHHHHTT-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC---
T ss_pred ----HHHHHHHhCC-----------CcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhhh
Confidence 2222222211 1222344556789999999999999999999999999999886543
No 65
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=366.20 Aligned_cols=261 Identities=24% Similarity=0.409 Sum_probs=210.7
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+.++.||+|+||+||+|++. +++.||+|++.. ......+.+.+|++++++++||||+++++++.+++..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR-FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 56888899999999999999874 689999998843 2344566789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++|+|.+++... ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+......
T Consensus 89 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 164 (310)
T 3s95_A 89 IKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQ 164 (310)
T ss_dssp CTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCcCeEEECCCCCEEEeecccceeccccccc
Confidence 9999999999743 456899999999999999999999887 999999999999999999999999999876433221
Q ss_pred c------------cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 845 E------------CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 845 ~------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
. ......||+.|+|||++.+..++.++||||+|+++|||++|..||............
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~---------- 234 (310)
T 3s95_A 165 PEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGL---------- 234 (310)
T ss_dssp ---------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSB----------
T ss_pred ccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhh----------
Confidence 1 111457999999999999999999999999999999999999998653321110000
Q ss_pred hhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 913 EFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 913 ~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
......+. ..+..++..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 235 ~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~ 283 (310)
T 3s95_A 235 NVRGFLDR---YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMH 283 (310)
T ss_dssp CHHHHHHH---TCCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred hhhccccc---cCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 00000000 01223445688999999999999999999999999988754
No 66
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=3.8e-40 Score=363.30 Aligned_cols=263 Identities=29% Similarity=0.428 Sum_probs=203.8
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
..+|+..+.||+|+||+||+|+. +++.||||++...... .....+.+|++++++++||||+++++++.+.+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 45788899999999999999987 6889999998543322 234568899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 764 YMRNGSLGEALHGKK-GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
|+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ .+|+||||||+||+++.++.+||+|||+++......
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~-~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRN-PPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSS-SCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCC-CCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 999999999997432 124899999999999999999999542 239999999999999999999999999997543221
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
.......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+........ ...
T Consensus 194 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~----~~~~~~~~~~----------~~~ 257 (309)
T 3p86_A 194 --LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNP----AQVVAAVGFK----------CKR 257 (309)
T ss_dssp ----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCH----HHHHHHHHHS----------CCC
T ss_pred --cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhc----------CCC
Confidence 223456799999999999999999999999999999999999999965322 1111111100 111
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
...+...+..+.+++.+||+.||++||+++|+++.|+.+.+..
T Consensus 258 ~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~ 300 (309)
T 3p86_A 258 LEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSA 300 (309)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC--
T ss_pred CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhC
Confidence 1234445667999999999999999999999999999887653
No 67
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=376.01 Aligned_cols=263 Identities=25% Similarity=0.355 Sum_probs=217.2
Q ss_pred HhhccCCCeeeccCceEEEEEEeC--------CCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP--------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNK 755 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 755 (995)
.++|+..+.||+|+||+||+|+.. .+..||||++..........++.+|+++++++ +||||+++++++.++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 357888999999999999999752 34679999996654444557789999999999 899999999999999
Q ss_pred CcceEEEEeccCCChhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKK--------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL 821 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill 821 (995)
+..++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||++
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCcceEEE
Confidence 99999999999999999997543 245899999999999999999999887 9999999999999
Q ss_pred CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHH
Q 001922 822 NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIV 900 (995)
Q Consensus 822 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~ 900 (995)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++|||||||++|||++ |..||.... ..
T Consensus 225 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~----~~ 300 (382)
T 3tt0_A 225 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VE 300 (382)
T ss_dssp CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC----HH
T ss_pred cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCC----HH
Confidence 9999999999999987655443344455668899999999999999999999999999999999 999996432 22
Q ss_pred HHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 901 QWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
+....+.... ....+..++..+.+++.+||+.||++||+++|+++.|+++....
T Consensus 301 ~~~~~~~~~~-----------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 354 (382)
T 3tt0_A 301 ELFKLLKEGH-----------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALT 354 (382)
T ss_dssp HHHHHHHTTC-----------CCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHcCC-----------CCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHH
Confidence 2222222211 11123345667999999999999999999999999999887543
No 68
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=362.71 Aligned_cols=270 Identities=20% Similarity=0.250 Sum_probs=215.9
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC--cceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE--TNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 762 (995)
++|+..+.||+|+||+||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.... ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999875 589999999965444445677889999999999999999999987655 779999
Q ss_pred EeccCCChhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCCeEEeeeccccc
Q 001922 763 EYMRNGSLGEALHGKKG-AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL----NSAFEAHVADFGLAKF 837 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill----~~~~~vkl~DfGla~~ 837 (995)
||+++|+|.+++..... ..+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 99999999999975332 33899999999999999999999887 9999999999999 7888899999999987
Q ss_pred cccCCCCccccccccCcccccccccc--------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcC
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAY--------TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~--------~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
+.... ......||+.|+|||++. +..++.++||||+||++|||++|+.||...............+..+
T Consensus 166 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (319)
T 4euu_A 166 LEDDE---QFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (319)
T ss_dssp CCTTC---CBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHH
T ss_pred cCCCC---ceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcC
Confidence 64432 223457999999999876 5678999999999999999999999997655544433333333322
Q ss_pred Chhhh----hhhcC---------CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccC
Q 001922 910 RKEEF----LSILD---------PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEF 961 (995)
Q Consensus 910 ~~~~~----~~~~d---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 961 (995)
..... ..... +.....+...+..+.+++.+||+.||++||+++|+++...+-
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 11110 00000 111235578889999999999999999999999999987653
No 69
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.1e-40 Score=365.50 Aligned_cols=255 Identities=22% Similarity=0.246 Sum_probs=206.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||+||+|+.. +++.||||++.........+.+.+|+.+++.++||||+++++++.+++..|+|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 467889999999999999999765 7899999998544444445668899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++|+|.+++. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 86 YCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp CCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999996 3456899999999999999999999887 99999999999999999999999999987654433
Q ss_pred CccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
........||+.|+|||++.+..+ +.++||||+||++|+|++|+.||............. .... ..
T Consensus 161 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~--~~~~-----------~~ 227 (323)
T 3tki_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDW--KEKK-----------TY 227 (323)
T ss_dssp ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHH--HTTC-----------TT
T ss_pred ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHH--hccc-----------cc
Confidence 333456689999999999987775 789999999999999999999997644332211110 1100 00
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.......+..+.+++.+||+.||++|||++|+++.
T Consensus 228 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 228 LNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp STTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01112345667899999999999999999999875
No 70
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-40 Score=374.02 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=213.5
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCC-
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKE- 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~- 756 (995)
.++|+..+.||+|+||.||+|++ .+++.||||++.........+.+.+|+++++++ +||||+++++++.+.+
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~ 100 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 100 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC
Confidence 46789999999999999999963 346889999996544444456799999999999 7999999999987754
Q ss_pred cceEEEEeccCCChhhhhcCCCC---------------------------------------------------------
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKG--------------------------------------------------------- 779 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 779 (995)
..++||||+++|+|.+++.....
T Consensus 101 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (359)
T 3vhe_A 101 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 180 (359)
T ss_dssp CCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------------
T ss_pred ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcc
Confidence 48999999999999999975432
Q ss_pred -------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCcccccccc
Q 001922 780 -------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAG 852 (995)
Q Consensus 780 -------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~g 852 (995)
..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.+.............|
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~ 257 (359)
T 3vhe_A 181 APEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL 257 (359)
T ss_dssp ---CTTTTCBCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEE
T ss_pred cccchhccccCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccCC
Confidence 12889999999999999999999887 99999999999999999999999999987654443344455678
Q ss_pred CcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHH
Q 001922 853 SYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAM 931 (995)
Q Consensus 853 t~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 931 (995)
|+.|+|||++.+..++.++||||||+++|||++ |+.||................. ....+...+.
T Consensus 258 t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~ 323 (359)
T 3vhe_A 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT--------------RMRAPDYTTP 323 (359)
T ss_dssp CGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC--------------CCCCCTTCCH
T ss_pred CceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCC--------------CCCCCCCCCH
Confidence 999999999999999999999999999999998 9999976543333322222111 1112333456
Q ss_pred HHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 932 HLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 932 ~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.+.+++.+||+.||++||+++|++++|+++..
T Consensus 324 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~ 355 (359)
T 3vhe_A 324 EMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 355 (359)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCCCHHHHHHHHHHHHH
Confidence 78999999999999999999999999988653
No 71
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6e-40 Score=368.39 Aligned_cols=265 Identities=24% Similarity=0.368 Sum_probs=213.7
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 757 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++.........+.+.+|+.+++++ +||||+++++++...+.
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 123 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGP 123 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCc
Confidence 46788899999999999999975 246689999996554455567899999999999 89999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCC---------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 001922 758 NLLVYEYMRNGSLGEALHGKKG---------------------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKS 816 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp 816 (995)
.++||||+++|+|.+++..... ..+++..++.++.||+.||+|||+++ |+||||||
T Consensus 124 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp 200 (344)
T 1rjb_A 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKS---CVHRDLAA 200 (344)
T ss_dssp CEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTT---EEETTCSG
T ss_pred cEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCh
Confidence 9999999999999999975432 24789999999999999999999887 99999999
Q ss_pred CCEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 001922 817 NNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGD 895 (995)
Q Consensus 817 ~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~ 895 (995)
+||+++.++.+||+|||++................+|+.|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 201 ~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 280 (344)
T 1rjb_A 201 RNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPV 280 (344)
T ss_dssp GGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCC
T ss_pred hhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCCc
Confidence 999999999999999999987655443333445668889999999999999999999999999999998 9999976544
Q ss_pred CchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 896 GVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.......... . .....+...+..+.+++.+||+.||++||+++|++++|+.+.....
T Consensus 281 ~~~~~~~~~~---~-----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 281 DANFYKLIQN---G-----------FKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp SHHHHHHHHT---T-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred HHHHHHHHhc---C-----------CCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 3333222211 1 0011233446679999999999999999999999999998876544
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.9e-41 Score=377.63 Aligned_cols=262 Identities=23% Similarity=0.331 Sum_probs=214.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||+||+|++. +++.||||++...........+.+|+.++++++||||+++++++.+....
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 457888999999999999999842 46789999986554455566788999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---CeEEe
Q 001922 759 LLVYEYMRNGSLGEALHGKK-----GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF---EAHVA 830 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~---~vkl~ 830 (995)
++||||+++|+|.+++.... ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEEecCCCCceEEEC
Confidence 99999999999999997422 245899999999999999999999887 99999999999999655 59999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
|||+++.+.............+|+.|+|||++.+..++.++|||||||++|||++ |..||..... ......+...
T Consensus 227 DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~----~~~~~~i~~~ 302 (367)
T 3l9p_A 227 DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLEFVTSG 302 (367)
T ss_dssp CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHHHTT
T ss_pred CCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC
Confidence 9999986644333333345678999999999999999999999999999999998 9999965321 2222222221
Q ss_pred ChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 910 RKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 910 ~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.....+..++..+.+++.+||+.||++||+++||++.|+.+.+.
T Consensus 303 -----------~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~ 346 (367)
T 3l9p_A 303 -----------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 346 (367)
T ss_dssp -----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----------CCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhC
Confidence 11122334566789999999999999999999999999987654
No 73
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=3.4e-40 Score=365.39 Aligned_cols=261 Identities=23% Similarity=0.343 Sum_probs=214.4
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++.........+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45788899999999999999975 345789999986544444557789999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCCC----------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 001922 759 LLVYEYMRNGSLGEALHGKKG----------------------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKS 816 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp 816 (995)
++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMK---LVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTT---EECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCC---Ccccccch
Confidence 999999999999999975322 34889999999999999999999887 99999999
Q ss_pred CCEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCC
Q 001922 817 NNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGD 895 (995)
Q Consensus 817 ~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~ 895 (995)
+||+++.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 999999999999999999987654433333344567889999999998889999999999999999999 9999965432
Q ss_pred CchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 896 GVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 896 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
. ..... .... .....+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 259 ~-~~~~~---~~~~-----------~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 311 (314)
T 2ivs_A 259 E-RLFNL---LKTG-----------HRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMV 311 (314)
T ss_dssp G-GHHHH---HHTT-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred H-HHHHH---hhcC-----------CcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 2 11111 1111 1112233456679999999999999999999999999988653
No 74
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3e-40 Score=384.23 Aligned_cols=259 Identities=25% Similarity=0.402 Sum_probs=213.5
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||+||+|++.++..||||++.... ...+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 188 ~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~ 264 (454)
T 1qcf_A 188 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFM 264 (454)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCC
T ss_pred HHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeec
Confidence 5678889999999999999999888999999996432 34678999999999999999999999986 56789999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++|+|.+++....+..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....... .
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~-~ 340 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-T 340 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHH-H
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCce-e
Confidence 9999999997544456889999999999999999999887 99999999999999999999999999987533211 1
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+|+.|+|||++....++.++|||||||++|||++ |+.||...... +....+..+. ...
T Consensus 341 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~----~~~~~i~~~~-----------~~~ 405 (454)
T 1qcf_A 341 AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP----EVIRALERGY-----------RMP 405 (454)
T ss_dssp TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH----HHHHHHHHTC-----------CCC
T ss_pred ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH----HHHHHHHcCC-----------CCC
Confidence 1223456789999999998999999999999999999999 99999654321 1112111110 011
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.+..++..+.++|.+||+.||++|||+++|++.|+++.....
T Consensus 406 ~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~~ 447 (454)
T 1qcf_A 406 RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATE 447 (454)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSSC
T ss_pred CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhccc
Confidence 234456789999999999999999999999999999876543
No 75
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.4e-39 Score=359.42 Aligned_cols=266 Identities=21% Similarity=0.249 Sum_probs=209.4
Q ss_pred HHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.++|+..+.||+|+||+||+|+..+|+.||+|++..... ......+.+|++++++++||||+++++++.+++..++||
T Consensus 19 l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 98 (311)
T 3niz_A 19 LMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVF 98 (311)
T ss_dssp SSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEE
T ss_pred hHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEE
Confidence 4578999999999999999999998899999999854322 233467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++ +|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 99 e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 173 (311)
T 3niz_A 99 EFMEK-DLKKVLDE-NKTGLQDSQIKIYLYQLLRGVAHCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPV 173 (311)
T ss_dssp ECCSE-EHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEETTSCC
T ss_pred cCCCC-CHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCchHhEEECCCCCEEEccCcCceecCCCc
Confidence 99975 88888864 3456899999999999999999999887 9999999999999999999999999998764322
Q ss_pred CCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC--
Q 001922 843 ASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD-- 919 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-- 919 (995)
.......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||....+..................+....+
T Consensus 174 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 174 --RSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp --C---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred --ccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccc
Confidence 22344578999999999876 5689999999999999999999999987665555555444333322211111110
Q ss_pred -------CcCCCC-----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 920 -------PRLSMV-----PKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 920 -------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
...... .+..+..+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 000011 1123457889999999999999999999987
No 76
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.8e-40 Score=359.48 Aligned_cols=265 Identities=25% Similarity=0.344 Sum_probs=208.6
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC--ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH--SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++...... ...+.+.+|+.++++++||||+++++++.+++..|+|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 35788999999999999999976 46899999998443222 2345788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 90 ~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 90 MEYIEGPTLSEYIES--HGPLSVDTAINFTNQILDGIKHAHDMR---IVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred EeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 999999999999964 346899999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
.. .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ........... ......
T Consensus 165 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~---~~~~~~~~~~~-~~~~~~----- 234 (294)
T 4eqm_A 165 SL-TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA---VSIAIKHIQDS-VPNVTT----- 234 (294)
T ss_dssp -----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH---HHHHHHHHSSC-CCCHHH-----
T ss_pred cc-cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHhhcc-CCCcch-----
Confidence 22 222345799999999999999999999999999999999999999965321 11111111111 111100
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHHccCCCCCc
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERP-RMREVVQMLSEFPRHSS 966 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~~ 966 (995)
..+...+..+.+++.+|++.||++|| +++++.+.|+++.....
T Consensus 235 --~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~ 278 (294)
T 4eqm_A 235 --DVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENR 278 (294)
T ss_dssp --HSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSS
T ss_pred --hcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhcc
Confidence 11223456789999999999999998 89999999999876543
No 77
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1.8e-39 Score=376.71 Aligned_cols=357 Identities=20% Similarity=0.190 Sum_probs=216.0
Q ss_pred ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCC
Q 001922 109 EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGL 188 (995)
Q Consensus 109 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 188 (995)
.++++++|++|+|++|.+++. | .+..+++|++|++++|+++++ | ++.+++|++|+|++|.+++. | ++.+++|
T Consensus 37 ~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L 108 (457)
T 3bz5_A 37 SEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKL 108 (457)
T ss_dssp EHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTC
T ss_pred ChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcC
Confidence 455555555555555555543 2 344455555555555555442 2 44445555555555554432 2 4444445
Q ss_pred ceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCcccccc
Q 001922 189 EYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHI 268 (995)
Q Consensus 189 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~ 268 (995)
++|++++|++++ +| ++.+++|++|++++|++++. .++.+++|+.|++++
T Consensus 109 ~~L~L~~N~l~~--------------------------l~--~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~ 157 (457)
T 3bz5_A 109 TYLNCDTNKLTK--------------------------LD--VSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHL 157 (457)
T ss_dssp CEEECCSSCCSC--------------------------CC--CTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTT
T ss_pred CEEECCCCcCCe--------------------------ec--CCCCCcCCEEECCCCcccee---ccccCCcCCEEECCC
Confidence 555555444442 11 44556777777777777753 266677777777777
Q ss_pred ccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCC
Q 001922 269 NLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIP 348 (995)
Q Consensus 269 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 348 (995)
|+..+.+ .+..+++|++|++++|++++. | +..+++|+.|++++|++++. .+..+++|+.|++++|++++ +|
T Consensus 158 n~~~~~~--~~~~l~~L~~L~ls~n~l~~l-~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip 228 (457)
T 3bz5_A 158 NKKITKL--DVTPQTQLTTLDCSFNKITEL-D--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID 228 (457)
T ss_dssp CSCCCCC--CCTTCTTCCEEECCSSCCCCC-C--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC
T ss_pred CCccccc--ccccCCcCCEEECCCCcccee-c--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC
Confidence 7544444 366667777777777777753 3 66666777777777777653 26666667777777777665 34
Q ss_pred CcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCC
Q 001922 349 ENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPG 428 (995)
Q Consensus 349 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 428 (995)
++.+++|++|++++|++++.. +..+++|+.|++++|. |+.|++++
T Consensus 229 --~~~l~~L~~L~l~~N~l~~~~---~~~l~~L~~L~l~~n~--------------L~~L~l~~---------------- 273 (457)
T 3bz5_A 229 --VTPLTQLTYFDCSVNPLTELD---VSTLSKLTTLHCIQTD--------------LLEIDLTH---------------- 273 (457)
T ss_dssp --CTTCTTCSEEECCSSCCSCCC---CTTCTTCCEEECTTCC--------------CSCCCCTT----------------
T ss_pred --ccccCCCCEEEeeCCcCCCcC---HHHCCCCCEEeccCCC--------------CCEEECCC----------------
Confidence 566666666666666666432 2334444555444432 33444444
Q ss_pred CceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhcccc
Q 001922 429 LNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLD 508 (995)
Q Consensus 429 L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 508 (995)
|.+.+.+|. ..+++|+.|++++|.+.+.+|. ...+|+.|++++| ++|+.|+
T Consensus 274 --------n~~~~~~~~-----~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~ 324 (457)
T 3bz5_A 274 --------NTQLIYFQA-----EGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLY 324 (457)
T ss_dssp --------CTTCCEEEC-----TTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEE
T ss_pred --------CccCCcccc-----cccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEE
Confidence 444444432 2345677777777776666664 3345555556555 4678888
Q ss_pred ccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCC
Q 001922 509 LSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 509 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 588 (995)
|++|+|++ ++ ++.+++|++|++++|+|++ ++.|..|++++|.++|. ..+..|..+++++|+|+|
T Consensus 325 L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g 388 (457)
T 3bz5_A 325 LNNTELTE-LD--VSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTI 388 (457)
T ss_dssp CTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEE
T ss_pred CCCCcccc-cc--cccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec-----ceeeecCccccccCcEEE
Confidence 88888886 33 7788888888888888875 24566677888888875 355667778888888888
Q ss_pred CCCCC
Q 001922 589 KLPES 593 (995)
Q Consensus 589 ~~p~~ 593 (995)
.||..
T Consensus 389 ~ip~~ 393 (457)
T 3bz5_A 389 AVSPD 393 (457)
T ss_dssp ECCTT
T ss_pred EcChh
Confidence 88863
No 78
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=3.9e-40 Score=366.71 Aligned_cols=260 Identities=25% Similarity=0.391 Sum_probs=204.3
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCc----EEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGV----EIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+.||+|+||+||+|++. +++ +||+|.+...........+.+|+.++++++||||+++++++.++ ..++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEE
Confidence 56888899999999999999863 344 35888875544445567899999999999999999999999875 4789
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+.+|+|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 94 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 99999999999999743 456899999999999999999999887 99999999999999999999999999987654
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
...........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... ...... ...
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~---~~~---------- 235 (327)
T 3poz_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSIL---EKG---------- 235 (327)
T ss_dssp TCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHHH---HTT----------
T ss_pred CcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHH-HHHHHH---HcC----------
Confidence 443333345567889999999999999999999999999999999 99999654322 221111 111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.+..
T Consensus 236 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~~ 280 (327)
T 3poz_A 236 -ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTSH
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhhh
Confidence 111123345667899999999999999999999999999887643
No 79
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=3.8e-39 Score=361.98 Aligned_cols=254 Identities=22% Similarity=0.262 Sum_probs=207.2
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-----ChhHHHHHHHHHHhccCCCCceeEeEEEecCCc
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-----SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET 757 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 757 (995)
+.+.|+..+.||+|+||+||+|+.+ +|+.||+|.+...... ...+.+.+|+.++++++||||+++++++.+...
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 4567999999999999999999764 6899999998543322 135678999999999999999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----CeEEeeec
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF----EAHVADFG 833 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~----~vkl~DfG 833 (995)
.|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++ .+||+|||
T Consensus 90 ~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~~~vkl~DFG 164 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (361)
T ss_dssp EEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCCS
T ss_pred EEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEeCCCCCccCEEEEecC
Confidence 9999999999999999953 457899999999999999999999887 99999999999998877 79999999
Q ss_pred cccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
+++.+.+.. .....+||+.|+|||++.+..++.++||||+||++|+|++|..||.... .......+.......
T Consensus 165 ~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~ 237 (361)
T 2yab_A 165 LAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDT----KQETLANITAVSYDF 237 (361)
T ss_dssp SCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSS----HHHHHHHHHTTCCCC
T ss_pred CceEcCCCC---ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhcCCCC
Confidence 998764432 2345679999999999999999999999999999999999999996532 122222222211000
Q ss_pred hhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 914 FLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 914 ~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
++. .....+..+.+++.+||+.||++|||++|++++
T Consensus 238 -----~~~---~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~h 273 (361)
T 2yab_A 238 -----DEE---FFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (361)
T ss_dssp -----CHH---HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred -----Cch---hccCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 000 001234568899999999999999999999863
No 80
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=3.1e-40 Score=367.38 Aligned_cols=262 Identities=25% Similarity=0.398 Sum_probs=208.8
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCc----EEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGV----EIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+.||+|+||+||+|++. +++ +||+|.+...........+.+|+.++++++||||+++++++. ++..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46788899999999999999764 344 378888754443444556788999999999999999999986 467899
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+.+|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 92 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHG---MVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTT---CCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCC---CCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 99999999999999743 456888999999999999999999887 99999999999999999999999999998755
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
...........+|+.|+|||++.+..++.++||||+|+++|||++ |+.||....... .... ....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~-~~~~---~~~~---------- 233 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE-VPDL---LEKG---------- 233 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH-HHHH---HHTT----------
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH-HHHH---HHcC----------
Confidence 444444455678889999999999999999999999999999999 999997543222 1111 1111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcc
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSD 967 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 967 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.+..+.
T Consensus 234 -~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~~~~ 280 (325)
T 3kex_A 234 -ERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARDPPR 280 (325)
T ss_dssp -CBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTSHHH
T ss_pred -CCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcchh
Confidence 01112223445678899999999999999999999999998765443
No 81
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.8e-40 Score=360.19 Aligned_cols=258 Identities=21% Similarity=0.369 Sum_probs=209.6
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
.++|+..+.||+|+||+||+|++.++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 35788889999999999999999888899999985432 2356789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 101 ~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~-~ 175 (283)
T 3gen_A 101 MANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ---FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE-Y 175 (283)
T ss_dssp CTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHH-H
T ss_pred cCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCccceEEEcCCCCEEEccccccccccccc-c
Confidence 9999999999742 456899999999999999999999887 9999999999999999999999999998653321 1
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... .....+... ...
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~----~~~~~~~~~-----------~~~ 240 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS----ETAEHIAQG-----------LRL 240 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH----HHHHHHHTT-----------CCC
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh----HHHHHHhcc-----------cCC
Confidence 11233456788999999998899999999999999999998 99999653321 122222211 111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
..+...+..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~ 281 (283)
T 3gen_A 241 YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDE 281 (283)
T ss_dssp CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhc
Confidence 12233456788999999999999999999999999887543
No 82
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=9.6e-40 Score=361.57 Aligned_cols=262 Identities=24% Similarity=0.383 Sum_probs=216.7
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 757 (995)
.++|+..+.||+|+||+||+|++ .+++.||+|++.........+.+.+|+.+++++ +||||+++++++.+++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788899999999999999974 356889999996554444567789999999999 89999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCC----------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 001922 758 NLLVYEYMRNGSLGEALHGKKG----------------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL 821 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~----------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill 821 (995)
.++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+++ |+||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEE
Confidence 9999999999999999975432 24899999999999999999999887 9999999999999
Q ss_pred CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHH
Q 001922 822 NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIV 900 (995)
Q Consensus 822 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~ 900 (995)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..........
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~ 258 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY 258 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence 9999999999999987655443333345567889999999999999999999999999999999 999997654433332
Q ss_pred HHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 901 QWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
........ ...+...+..+.+++.+||+.||++||+++|++++|+++..
T Consensus 259 ~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 259 KMIKEGFR--------------MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHTCC--------------CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhccCCC--------------CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 22221110 11223345678999999999999999999999999988654
No 83
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-39 Score=361.20 Aligned_cols=253 Identities=21% Similarity=0.221 Sum_probs=206.4
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.++|+..+.||+|+||+||+|+.. +++.||+|.+.. .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~--~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~ 80 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV--KGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIF 80 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC--CTHHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEec--CcccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEE
Confidence 3567899999999999999999764 588899999853 2334566889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--CCCeEEeeecccccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS--AFEAHVADFGLAKFLID 840 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~--~~~vkl~DfGla~~~~~ 840 (995)
||+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++.+..
T Consensus 81 e~~~g~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~g---ivH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~ 156 (321)
T 1tki_A 81 EFISGLDIFERINT-SAFELNEREIVSYVHQVCEALQFLHSHN---IGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKP 156 (321)
T ss_dssp CCCCCCBHHHHHTS-SSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSCCCEEECCCTTCEECCT
T ss_pred EeCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEccCCCCCEEEEECCCCeECCC
Confidence 99999999999963 3356899999999999999999999887 999999999999987 78999999999987643
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. ......||+.|+|||++.+..++.++||||+||++|+|++|..||..... ......+..........
T Consensus 157 ~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~~~~~---- 225 (321)
T 1tki_A 157 GD---NFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN----QQIIENIMNAEYTFDEE---- 225 (321)
T ss_dssp TC---EEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHHTCCCCCHH----
T ss_pred CC---ccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH----HHHHHHHHcCCCCCChh----
Confidence 32 23456799999999999988899999999999999999999999965322 12222222111000000
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....+..+.+++.+|++.||++|||++|++++
T Consensus 226 ----~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 226 ----AFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----HHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----hhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 001235678899999999999999999999974
No 84
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.5e-40 Score=381.62 Aligned_cols=263 Identities=30% Similarity=0.418 Sum_probs=210.7
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
+.|+..+.||+|+||+||+|++..+..||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 184 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~ 260 (452)
T 1fmk_A 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 260 (452)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhh
Confidence 4678889999999999999999888889999986432 335679999999999999999999999876 6789999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++|+|.+++....+..+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...+... .
T Consensus 261 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-~ 336 (452)
T 1fmk_A 261 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY-T 336 (452)
T ss_dssp TTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCCCTTC---------
T ss_pred cCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChhhEEECCCCCEEECCCccceecCCCce-e
Confidence 9999999997544456899999999999999999999887 99999999999999999999999999987643322 1
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+++.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+..+ ....
T Consensus 337 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~----~~~~~~i~~~-----------~~~~ 401 (452)
T 1fmk_A 337 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERG-----------YRMP 401 (452)
T ss_dssp ------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTT-----------CCCC
T ss_pred cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC-----------CCCC
Confidence 2233457889999999999999999999999999999999 9999965332 1222222211 1112
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCccccc
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSDFNQ 970 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~ 970 (995)
.+..++..+.+++.+||+.||++|||++++++.|+++.....+.++
T Consensus 402 ~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~~~~ 447 (452)
T 1fmk_A 402 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 447 (452)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCCCCC
T ss_pred CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCcccc
Confidence 2345667899999999999999999999999999998766544433
No 85
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.5e-39 Score=355.59 Aligned_cols=262 Identities=30% Similarity=0.460 Sum_probs=200.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
..+|+..+.||+|+||+||+|+.. ..||+|++..... ....+.+.+|+.++++++||||+++++++ .....++|||
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred ccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 356888999999999999999864 3699999854332 23346789999999999999999999965 4567899999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 175 (289)
T 3og7_A 100 WCEGSSLYHHLHA-SETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG 175 (289)
T ss_dssp CCCEEEHHHHHTT-C---CCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEETTTEEEECCCC----------
T ss_pred ecCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEECCCCCEEEccceeccccccccc
Confidence 9999999999964 3456899999999999999999999887 99999999999999999999999999986543333
Q ss_pred CccccccccCcccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 844 SECMSAIAGSYGYIAPEYAY---TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
........||+.|+|||++. +..++.++||||+|+++|+|++|+.||................. ..+
T Consensus 176 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~----------~~~ 245 (289)
T 3og7_A 176 SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGS----------LSP 245 (289)
T ss_dssp --------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTS----------CCC
T ss_pred cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccc----------cCc
Confidence 33344567999999999986 56788899999999999999999999976544333333222111 112
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
........++..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 246 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 DLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred chhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 2222334556789999999999999999999999999998875
No 86
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=1.2e-39 Score=362.63 Aligned_cols=249 Identities=22% Similarity=0.239 Sum_probs=206.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||+||+|+.+ +|+.||+|++.+.. .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57888999999999999999774 68999999985321 2233566889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++......
T Consensus 85 E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 85 EYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp ECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred eCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 99999999999963 346899999999999999999999887 9999999999999999999999999998643221
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+... .
T Consensus 160 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~i~~~-----------~- 221 (337)
T 1o6l_A 160 --ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD----HERLFELILME-----------E- 221 (337)
T ss_dssp --CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC-----------C-
T ss_pred --CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCC----HHHHHHHHHcC-----------C-
Confidence 22345689999999999999999999999999999999999999996422 12222222111 0
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQM 957 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 222 ~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 222 IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 112334566789999999999999999 89999864
No 87
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-39 Score=359.43 Aligned_cols=255 Identities=22% Similarity=0.250 Sum_probs=207.1
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-----ChhHHHHHHHHHHhccCCCCceeEeEEEecCC
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-----SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE 756 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 756 (995)
++.+.|+..+.||+|+||.||+|+.. +|+.||+|++...... ...+.+.+|+.++++++||||+++++++.+..
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 87 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT 87 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 45678999999999999999999874 6899999998543222 23567899999999999999999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----CeEEeee
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF----EAHVADF 832 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~----~vkl~Df 832 (995)
..++||||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 88 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~kl~Df 162 (326)
T 2y0a_A 88 DVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQ---IAHFDLKPENIMLLDRNVPKPRIKIIDF 162 (326)
T ss_dssp EEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCSSSSSCCEEECCC
T ss_pred EEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCC---eEcCCCCHHHEEEecCCCCCCCEEEEEC
Confidence 99999999999999999953 457899999999999999999999887 99999999999999887 7999999
Q ss_pred ccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
|+++.+.... ......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... .....+......
T Consensus 163 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~----~~~~~~~~~~~~ 235 (326)
T 2y0a_A 163 GLAHKIDFGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ----ETLANVSAVNYE 235 (326)
T ss_dssp TTCEECCTTS---CCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH----HHHHHHHHTCCC
T ss_pred CCCeECCCCC---ccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH----HHHHHHHhcCCC
Confidence 9998764322 224567999999999999999999999999999999999999999643221 111111111000
Q ss_pred hhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 913 EFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 913 ~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
... ......+..+.+++.+||+.||++|||++|++++
T Consensus 236 ~~~--------~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 236 FED--------EYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp CCH--------HHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred cCc--------cccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 000 0011234568899999999999999999999974
No 88
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.9e-39 Score=376.80 Aligned_cols=252 Identities=28% Similarity=0.390 Sum_probs=208.6
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC-cceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE-TNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-~~~lv~e~ 764 (995)
++|+..+.||+|+||.||+|++. ++.||||++.... ..+.+.+|+.++++++||||+++++++.+.+ ..|+||||
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 46788899999999999999884 7899999995432 4567999999999999999999999986654 78999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++|+|.+++.......+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~--- 342 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 342 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEECCCCCEEEeeCCCccccccc---
Confidence 99999999998655555799999999999999999999887 999999999999999999999999999854221
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.....+++.|+|||++.+..++.++|||||||++|||++ |+.||......... ..+..+ ...
T Consensus 343 --~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~----~~i~~~-----------~~~ 405 (450)
T 1k9a_A 343 --QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV----PRVEKG-----------YKM 405 (450)
T ss_dssp ------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHH----HHHHTT-----------CCC
T ss_pred --ccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH----HHHHcC-----------CCC
Confidence 123367889999999999999999999999999999998 99999765432221 111111 111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
..+..++..+.++|.+||+.||++|||++++++.|+++...
T Consensus 406 ~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~ 446 (450)
T 1k9a_A 406 DAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTH 446 (450)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHh
Confidence 23445667899999999999999999999999999987643
No 89
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.2e-39 Score=382.75 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=215.1
Q ss_pred hhccCCCeeeccCceEEEEEEeCC-CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPN-GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
..|+..+.||+|+||.||+|++.. +..||||++... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 220 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~--~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSS--SSCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCc--ccchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 457788999999999999998754 889999998543 23467799999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++...... .
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~ 373 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT-Y 373 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCEEECCTTCEECCTTCC-E
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChhhEEECCCCcEEEeecccceeccCCc-e
Confidence 99999999998656667999999999999999999999887 9999999999999999999999999998764322 1
Q ss_pred ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 845 ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......+++.|+|||++.+..++.++|||||||++|||++ |..||...... ...+ .+... ...
T Consensus 374 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~-~~~~---~~~~~-----------~~~ 438 (495)
T 1opk_A 374 TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYE---LLEKD-----------YRM 438 (495)
T ss_dssp ECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHH---HHHTT-----------CCC
T ss_pred eecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH-HHHH---HHHcC-----------CCC
Confidence 22233456789999999998899999999999999999999 99999654322 1111 11111 011
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
..+..++..+.++|.+||+.||++||+++|+++.|+.+.+..
T Consensus 439 ~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~~ 480 (495)
T 1opk_A 439 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 480 (495)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSSS
T ss_pred CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhcc
Confidence 234456678999999999999999999999999999987543
No 90
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-39 Score=357.20 Aligned_cols=270 Identities=25% Similarity=0.345 Sum_probs=207.3
Q ss_pred HhhccCCCeeeccCceEEEEEEe-----CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec--CCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-----PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN--KET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~--~~~ 757 (995)
.++|+..+.||+|+||+||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS-TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccC-CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 35788899999999999999974 36889999998532 33345678999999999999999999999854 356
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~ 163 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKV 163 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCSCC-
T ss_pred eEEEEEeCCCCCHHHHHHhc-ccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHhhEEEcCCCeEEEccCccccc
Confidence 89999999999999999743 345899999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh----
Q 001922 838 LIDGGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE---- 912 (995)
Q Consensus 838 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~---- 912 (995)
....... .......++..|+|||++.+..++.++||||+|+++|||++|..||.... ..+..........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~ 238 (295)
T 3ugc_A 164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPP-----AEFMRMIGNDKQGQMIV 238 (295)
T ss_dssp ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHH-----HHHHHHHCTTCCTHHHH
T ss_pred ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCCh-----HHHHhhhcCccccchhH
Confidence 6433221 22234457788999999999999999999999999999999999985421 1111111110000
Q ss_pred -hh-hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 913 -EF-LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 913 -~~-~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.. ...........+..++..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 239 FHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 00 01111112223445677899999999999999999999999999987654
No 91
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.7e-39 Score=353.30 Aligned_cols=265 Identities=21% Similarity=0.268 Sum_probs=203.5
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+..+.||+|+||+||+|+..+|+.||+|++..... ......+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888899999999999999988899999999854322 22346788999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
+++ +|.+++... ...+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--~ 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIP--V 154 (288)
T ss_dssp CSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCTTHHHHHCC----
T ss_pred cCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEeECccccccCcc--c
Confidence 976 999988743 356889999999999999999999887 999999999999999999999999999875322 1
Q ss_pred ccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh-----hc
Q 001922 845 ECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS-----IL 918 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 918 (995)
.......||+.|+|||++.+. .++.++||||+||++|||++|+.||.......................+.. ..
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T 1ob3_A 155 RKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKY 234 (288)
T ss_dssp -------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTC
T ss_pred cccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhccccc
Confidence 222345789999999998764 589999999999999999999999976443333333322222111111100 01
Q ss_pred CCcCC--------CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 919 DPRLS--------MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 919 d~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
++... ......+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 281 (288)
T 1ob3_A 235 DPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281 (288)
T ss_dssp CTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 11110 1112345678899999999999999999999863
No 92
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.6e-39 Score=363.07 Aligned_cols=261 Identities=24% Similarity=0.371 Sum_probs=213.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC--------CCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP--------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNK 755 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~ 755 (995)
.++|+..+.||+|+||.||+|++. +++.||+|++...........+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367889999999999999999763 46789999986544444556789999999999 899999999999999
Q ss_pred CcceEEEEeccCCChhhhhcCCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKKG--------------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL 821 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill 821 (995)
+..++||||+++|+|.+++..... ..+++..++.++.||+.||.|||+.+ |+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQK---CIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCccceEEE
Confidence 999999999999999999975431 34889999999999999999999887 9999999999999
Q ss_pred CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHH
Q 001922 822 NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIV 900 (995)
Q Consensus 822 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~ 900 (995)
+.++.+||+|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||.... ..
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~----~~ 266 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----VE 266 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCC----HH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCC----HH
Confidence 9999999999999987654433333344567889999999988889999999999999999999 999996532 12
Q ss_pred HHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 901 QWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 901 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
+....+... .....+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 267 ~~~~~~~~~-----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~ 318 (334)
T 2pvf_A 267 ELFKLLKEG-----------HRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILT 318 (334)
T ss_dssp HHHHHHHHT-----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhcC-----------CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 222221111 0111233455678999999999999999999999999998865
No 93
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.4e-39 Score=361.81 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=215.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||.||+|++. +++.||+|++...........+.+|+.++++++||||+++++++.+++..
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 103 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPT 103 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCcc
Confidence 467899999999999999999753 36789999986544444456788999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 759 LLVYEYMRNGSLGEALHGKK--------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~--------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
++||||+++|+|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+
T Consensus 104 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~NIli~~~~~~kl~ 180 (322)
T 1p4o_A 104 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKIG 180 (322)
T ss_dssp EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCSGGGEEECTTCCEEEC
T ss_pred EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---CccCCCccceEEEcCCCeEEEC
Confidence 99999999999999986421 245689999999999999999999887 9999999999999999999999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
|||+++...............+|+.|+|||++.+..++.++||||+|+++|||++ |..||.... ..+.......
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~----~~~~~~~~~~- 255 (322)
T 1p4o_A 181 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS----NEQVLRFVME- 255 (322)
T ss_dssp CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC----HHHHHHHHHT-
T ss_pred cCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCC----HHHHHHHHHc-
Confidence 9999987644333333344567899999999999999999999999999999999 899986532 1222222211
Q ss_pred ChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 910 RKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 910 ~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
......+...+..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 256 ----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 256 ----------GGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp ----------TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred ----------CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 112223344566789999999999999999999999999998663
No 94
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=1.2e-39 Score=354.67 Aligned_cols=258 Identities=26% Similarity=0.349 Sum_probs=199.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeCC----CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPN----GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||.||+|.+.. +..||+|++.........+.+.+|+.++++++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4578899999999999999997643 45699999865444444567899999999999999999999985 467899
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 168 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 168 (281)
T ss_dssp EEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECC---------
T ss_pred EEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHEEECCCCCEEECccccccccCc
Confidence 99999999999999743 446899999999999999999999887 99999999999999999999999999987644
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
.... ......+|+.|+|||++.+..++.++||||+|+++|||++ |..||........ . ..+...
T Consensus 169 ~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~-~---~~i~~~---------- 233 (281)
T 1mp8_A 169 STYY-KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-I---GRIENG---------- 233 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH-H---HHHHTT----------
T ss_pred cccc-ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH-H---HHHHcC----------
Confidence 3221 2234457789999999998899999999999999999997 9999975432221 1 111111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 234 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 276 (281)
T 1mp8_A 234 -ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276 (281)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 1112334456778999999999999999999999999988653
No 95
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.6e-39 Score=361.20 Aligned_cols=248 Identities=23% Similarity=0.305 Sum_probs=204.2
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..+|+..+.||+|+||+||+|++ .+++.||+|++.... .......+.+|+.+++.++||||+++++++.+++..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35788899999999999999986 578999999984321 122245688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+ +|+|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....++
T Consensus 88 ~E~~-~g~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~ 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVE--KKRMTEDEGRRFFQQIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161 (336)
T ss_dssp ECCC-CEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS
T ss_pred EECC-CCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCchhhEEEcCCCCEEEEEeccceeccCC
Confidence 9999 6799998853 346899999999999999999999888 999999999999999999999999999876433
Q ss_pred CCCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
......+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||....... ....+..
T Consensus 162 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~----------------~~~~i~~ 222 (336)
T 3h4j_B 162 ---NFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPN----------------LFKKVNS 222 (336)
T ss_dssp ---BTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTT----------------CBCCCCS
T ss_pred ---cccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHH----------------HHHHHHc
Confidence 22345679999999999988776 689999999999999999999996532111 1111111
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 223 ~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 223 CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 1222344456778999999999999999999999864
No 96
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=3.9e-39 Score=359.83 Aligned_cols=255 Identities=20% Similarity=0.302 Sum_probs=203.3
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC-----
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE----- 756 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 756 (995)
...++|+..+.||+|+||.||+|+.. +++.||||++.........+.+.+|++++++++||||+++++++.+..
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 82 (332)
T 3qd2_B 3 RYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQ 82 (332)
T ss_dssp HHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHH
T ss_pred hhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhh
Confidence 45678999999999999999999875 799999999965555556778999999999999999999999985543
Q ss_pred ----------------------------------------------------cceEEEEeccCCChhhhhcCCCC-CCCC
Q 001922 757 ----------------------------------------------------TNLLVYEYMRNGSLGEALHGKKG-AFLG 783 (995)
Q Consensus 757 ----------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~-~~~~ 783 (995)
..++||||+++|+|.+++..... ...+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~ 162 (332)
T 3qd2_B 83 EEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDRE 162 (332)
T ss_dssp HHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSC
T ss_pred hhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchh
Confidence 27999999999999999975332 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC----------ccccccccC
Q 001922 784 WNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS----------ECMSAIAGS 853 (995)
Q Consensus 784 ~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~----------~~~~~~~gt 853 (995)
+..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++........ .......||
T Consensus 163 ~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt 239 (332)
T 3qd2_B 163 HGVCLHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGT 239 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-C
T ss_pred hHHHHHHHHHHHHHHHHHHhCC---eeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCC
Confidence 7778999999999999999887 999999999999999999999999999876543211 122345799
Q ss_pred cccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHH
Q 001922 854 YGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHL 933 (995)
Q Consensus 854 ~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l 933 (995)
+.|+|||++.+..++.++||||+||++|||++|..|+.. ......... ....+......+..+
T Consensus 240 ~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~------~~~~~~~~~-----------~~~~~~~~~~~~~~~ 302 (332)
T 3qd2_B 240 KLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME------RVRIITDVR-----------NLKFPLLFTQKYPQE 302 (332)
T ss_dssp GGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH------HHHHHHHHH-----------TTCCCHHHHHHCHHH
T ss_pred cCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH------HHHHHHHhh-----------ccCCCcccccCChhH
Confidence 999999999999999999999999999999998777521 111111111 111122233455678
Q ss_pred HHHHhcccCCCCCCCCCHHHHHHH
Q 001922 934 LFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 934 ~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+++.+||+.||++||+++|+++.
T Consensus 303 ~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 303 HMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp HHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred HHHHHHHccCCCCcCCCHHHHhhc
Confidence 899999999999999999999873
No 97
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=8e-39 Score=354.89 Aligned_cols=249 Identities=22% Similarity=0.307 Sum_probs=204.8
Q ss_pred hccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
.|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 124 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLR-KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL 124 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT-TCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEecc-chhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence 3566678999999999999875 7999999998543 3344667899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++|+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....... .
T Consensus 125 ~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 196 (321)
T 2c30_A 125 QGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--P 196 (321)
T ss_dssp CSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS--C
T ss_pred CCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCcEEEeeeeeeeecccCc--c
Confidence 99999999863 35899999999999999999999887 9999999999999999999999999998764322 1
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMV 925 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 925 (995)
......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... .+....+.... .+.. ..
T Consensus 197 ~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~----~~~~~~~~~~~--------~~~~-~~ 263 (321)
T 2c30_A 197 KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKRLRDSP--------PPKL-KN 263 (321)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHSS--------CCCC-TT
T ss_pred ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhcCC--------CCCc-Cc
Confidence 22456799999999999999999999999999999999999999964321 11222221111 1111 11
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 926 PKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 926 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
+...+..+.+++.+||+.||++||+++|+++.
T Consensus 264 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 264 SHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 22345678899999999999999999999874
No 98
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.8e-39 Score=361.61 Aligned_cols=255 Identities=22% Similarity=0.283 Sum_probs=206.7
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.+.++|+..+.||+|+||.||+|... +++.||+|++..... ....+.+.+|+.++++++||||+++++++.+.+..|+
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45678999999999999999999764 689999999854332 2334668899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---CeEEeeeccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF---EAHVADFGLAKF 837 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~---~vkl~DfGla~~ 837 (995)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++ .+||+|||++..
T Consensus 106 v~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~ 180 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIE 180 (362)
T ss_dssp EECCCCSCBHHHHHTT--CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEESCSSTTCCEEECCCTTCBC
T ss_pred EEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEeecCcceE
Confidence 9999999999999953 456899999999999999999999887 99999999999998654 599999999987
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
..+.. ......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... .......+.......
T Consensus 181 ~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~----~~~~~~~i~~~~~~~---- 249 (362)
T 2bdw_A 181 VNDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED----QHRLYAQIKAGAYDY---- 249 (362)
T ss_dssp CTTCC---SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHTCCCC----
T ss_pred ecCCc---ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCC----HHHHHHHHHhCCCCC----
Confidence 64332 2235679999999999999999999999999999999999999996532 122222222111000
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+ .....+..+.+++.+||+.||++||+++|++++
T Consensus 250 ~~~----~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTT----GGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred Ccc----cccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 000 112345678899999999999999999999864
No 99
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=362.90 Aligned_cols=263 Identities=21% Similarity=0.296 Sum_probs=197.2
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCC----cEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc-
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNG----VEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN- 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~----~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~- 758 (995)
.++|+..+.||+|+||+||+|+.... ..||||++.... .....+.+.+|++++++++||||+++++++......
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 35788899999999999999986543 279999985432 333457789999999999999999999999876655
Q ss_pred -----eEEEEeccCCChhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEE
Q 001922 759 -----LLVYEYMRNGSLGEALHGK----KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHV 829 (995)
Q Consensus 759 -----~lv~e~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl 829 (995)
++||||+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCC---cccCCCCcceEEEcCCCCEEE
Confidence 9999999999999998532 2235899999999999999999999887 999999999999999999999
Q ss_pred eeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhc
Q 001922 830 ADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATN 908 (995)
Q Consensus 830 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~ 908 (995)
+|||+++...............+++.|+|||.+.+..++.++||||+||++|||++ |+.||.......... ...
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~----~~~- 253 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYN----YLI- 253 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH----HHH-
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHH----HHh-
Confidence 99999987655443333345567889999999999999999999999999999999 999997543322111 111
Q ss_pred CChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 909 GRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 909 ~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
.......+...+..+.+++.+||+.||++||++.|+++.|+++....
T Consensus 254 ----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~ 300 (323)
T 3qup_A 254 ----------GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHL 300 (323)
T ss_dssp ----------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred ----------cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11112233445667999999999999999999999999999987754
No 100
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.7e-39 Score=371.61 Aligned_cols=258 Identities=21% Similarity=0.245 Sum_probs=206.9
Q ss_pred HHHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 681 VSDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 681 ~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
...+.++|+..+.||+|+||+||+|.. .+|+.||+|++..... ....+.+.+|++++++++||||+++++++.+++..
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 85 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHH 85 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEE
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEE
Confidence 345678899999999999999999975 5789999999854332 22345688999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC---CCCCeEEeeeccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN---SAFEAHVADFGLA 835 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~---~~~~vkl~DfGla 835 (995)
|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||++
T Consensus 86 ~lv~E~~~gg~L~~~i~~--~~~~~e~~~~~i~~qil~aL~~lH~~g---ivHrDlKp~NIll~~~~~~~~vkL~DFG~a 160 (444)
T 3soa_A 86 YLIFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMG---VVHRNLKPENLLLASKLKGAAVKLADFGLA 160 (444)
T ss_dssp EEEECCCBCCBHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred EEEEEeCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence 999999999999999964 356899999999999999999999887 99999999999998 4678999999999
Q ss_pred cccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 836 KFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
+...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||..... ......+..+...
T Consensus 161 ~~~~~~~--~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~----~~~~~~i~~~~~~--- 231 (444)
T 3soa_A 161 IEVEGEQ--QAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ----HRLYQQIKAGAYD--- 231 (444)
T ss_dssp BCCCTTC--CBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHTCCC---
T ss_pred EEecCCC--ceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH----HHHHHHHHhCCCC---
Confidence 8764322 223456799999999999999999999999999999999999999965321 2222222211110
Q ss_pred hhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+.. ...+..+.+++.+||+.||++|||++|+++.
T Consensus 232 -~~~~~~----~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 232 -FPSPEW----DTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp -CCTTTT----TTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred -CCcccc----ccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 001111 2345678899999999999999999999874
No 101
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=8.5e-39 Score=351.84 Aligned_cols=259 Identities=24% Similarity=0.323 Sum_probs=202.8
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhc--cCCCCceeEeEEEec----CCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGN--IRHRNIVRLLAFCSN----KETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~----~~~~ 758 (995)
.++|+..+.||+|+||+||+|++ +++.||||++.. .....+..|.+++.. ++||||+++++++.+ ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSS----RDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecc----ccchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 46788999999999999999988 789999999843 234556667776666 799999999998643 3457
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLH--------HDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH--------~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
++||||+++|+|.++++. ..+++..+++++.|++.||+||| +.+ |+||||||+||+++.++.+||+
T Consensus 82 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nill~~~~~~kl~ 155 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQL---TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPA---IAHRDLKSKNILVKKNGQCCIA 155 (301)
T ss_dssp EEEECCCTTCBHHHHHTT---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCE---EECSCCCGGGEEECTTSCEEEC
T ss_pred EEehhhccCCCHHHHHhh---cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCC---eecCCCChHhEEEcCCCCEEEe
Confidence 999999999999999953 46899999999999999999999 777 9999999999999999999999
Q ss_pred eeccccccccCCCCc--cccccccCcccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCC
Q 001922 831 DFGLAKFLIDGGASE--CMSAIAGSYGYIAPEYAYTL------RVDEKSDVYSFGVVLLELLTG----------RRPVGD 892 (995)
Q Consensus 831 DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~Pf~~ 892 (995)
|||+++......... ......||+.|+|||++.+. .++.++||||+||++|||++| +.||..
T Consensus 156 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~ 235 (301)
T 3q4u_A 156 DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD 235 (301)
T ss_dssp CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence 999998654432221 12334799999999998876 456799999999999999999 888865
Q ss_pred CCCCch-HHHHHHHHhcCChhhhhhhcCCcCC--CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccC
Q 001922 893 FGDGVD-IVQWSKRATNGRKEEFLSILDPRLS--MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEF 961 (995)
Q Consensus 893 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 961 (995)
...... ............ ..+..+ ..+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 236 VVPNDPSFEDMRKVVCVDQ-------QRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp TSCSSCCHHHHHHHHTTSC-------CCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCcchhhhhHHHhccC-------CCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 433222 222222111110 011111 12345788899999999999999999999999999875
No 102
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=6e-39 Score=366.45 Aligned_cols=276 Identities=21% Similarity=0.215 Sum_probs=210.0
Q ss_pred HhhccCCCeeecc--CceEEEEEEeC-CCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRG--GAGIVYHGKMP-NGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G--~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
..+|+..+.||+| +||+||+|+.. +++.||||++..... ....+.+.+|+.++++++|||||++++++.+++..|+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3578999999999 99999999875 689999999854322 2234568889999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.......+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 999999999999998665677999999999999999999999887 99999999999999999999999999875433
Q ss_pred CCC-----CccccccccCccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC---
Q 001922 841 GGA-----SECMSAIAGSYGYIAPEYAYT--LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR--- 910 (995)
Q Consensus 841 ~~~-----~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--- 910 (995)
... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....................
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 260 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDT 260 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-----------
T ss_pred ccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccc
Confidence 221 111233478999999999987 6789999999999999999999999976544333222211100000
Q ss_pred ----hhhh-------------hhh----------cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccC
Q 001922 911 ----KEEF-------------LSI----------LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEF 961 (995)
Q Consensus 911 ----~~~~-------------~~~----------~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~ 961 (995)
.... ... .+......+...+..+.+++.+||+.||++|||++|+++. ++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 261 STIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp ---------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred cccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 0000 000 0000001233456679999999999999999999999965 6655
Q ss_pred CC
Q 001922 962 PR 963 (995)
Q Consensus 962 ~~ 963 (995)
..
T Consensus 341 ~~ 342 (389)
T 3gni_B 341 KR 342 (389)
T ss_dssp --
T ss_pred hh
Confidence 54
No 103
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=360.67 Aligned_cols=259 Identities=24% Similarity=0.385 Sum_probs=203.4
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCc----EEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGV----EIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+.||+|+||+||+|++. +++ +||+|.+...........+.+|+.++++++||||+++++++..+. .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888899999999999999763 344 457787755555556778999999999999999999999998654 789
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+.+|+|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 94 v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCC---CcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 99999999999999743 456899999999999999999999887 99999999999999999999999999987654
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
...........+|+.|+|||++.+..++.++||||+||++|||++ |+.||...... ..... ....
T Consensus 170 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~-~~~~~---~~~~---------- 235 (327)
T 3lzb_A 170 EEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS-EISSI---LEKG---------- 235 (327)
T ss_dssp ----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGG-GHHHH---HHTT----------
T ss_pred ccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHH-HHHHH---HHcC----------
Confidence 433333344567889999999999999999999999999999999 99999654322 11111 1111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++.+.
T Consensus 236 -~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 236 -ERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -CCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 11112334566789999999999999999999999999998754
No 104
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=8.3e-39 Score=361.12 Aligned_cols=251 Identities=22% Similarity=0.275 Sum_probs=205.1
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|+++++.++|||||++++++.+.+..|+|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357888999999999999999764 58899999984321 223356788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+.+|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 94 ~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQ--NVHFKEETVKLFICELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp ECCCTTEEHHHHHHT--TCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 999999999999964 456899999999999999999999887 999999999999999999999999999876432
Q ss_pred CCCccccccccCccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYT---LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
......+||+.|+|||++.+ ..++.++||||+||++|||++|+.||....... .......+...
T Consensus 169 ---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~-~~~~~~~~~~~--------- 235 (384)
T 4fr4_A 169 ---TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTS-SKEIVHTFETT--------- 235 (384)
T ss_dssp ---CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSC-HHHHHHHHHHC---------
T ss_pred ---CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCcc-HHHHHHHHhhc---------
Confidence 23356689999999999864 458999999999999999999999997543322 22222211111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCC-HHHHHH
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPR-MREVVQ 956 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~ 956 (995)
....+...+..+.+++.+||+.||++||+ ++++.+
T Consensus 236 ---~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 236 ---VVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp ---CCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred ---ccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 11233445677899999999999999998 777664
No 105
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.1e-39 Score=368.17 Aligned_cols=273 Identities=20% Similarity=0.260 Sum_probs=217.9
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC--cceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE--TNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~lv~ 762 (995)
++|+..+.||+|+||+||+|++. +++.||||++.........+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999875 589999999965444445677889999999999999999999997655 679999
Q ss_pred EeccCCChhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCCeEEeeeccccc
Q 001922 763 EYMRNGSLGEALHGKK-GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL----NSAFEAHVADFGLAKF 837 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill----~~~~~vkl~DfGla~~ 837 (995)
||+++|+|.+++.... ...+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCC---EEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 9999999999997532 233899999999999999999999887 9999999999999 7778899999999987
Q ss_pred cccCCCCccccccccCccccccccccc--------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcC
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYT--------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~--------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
.... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..........+....+..+
T Consensus 166 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~ 242 (396)
T 4eut_A 166 LEDD---EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITG 242 (396)
T ss_dssp CCCG---GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHS
T ss_pred ccCC---CccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcC
Confidence 6432 22345679999999998765 567889999999999999999999997655444333333333332
Q ss_pred Chhhhhhhc----C---------CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 910 RKEEFLSIL----D---------PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 910 ~~~~~~~~~----d---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
........+ + +.....+...+..+.+++.+||+.||++||+++|+++.++++...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~ 310 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTC
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhc
Confidence 211110000 0 111234578889999999999999999999999999999887654
No 106
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=9.6e-40 Score=359.60 Aligned_cols=262 Identities=24% Similarity=0.327 Sum_probs=208.7
Q ss_pred hhccCCCeeeccCceEEEEEEe-----CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecC--Ccc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-----PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK--ETN 758 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~ 758 (995)
+.|+..+.||+|+||.||+|++ .+++.||+|++.........+.+.+|++++++++||||+++++++.+. ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588889999999999999983 468999999996555555567899999999999999999999999776 668
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||++..+
T Consensus 101 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKN-KNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEeCCCCcHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHhhcCC---cccCCCchheEEEcCCCCEEECcccccccc
Confidence 9999999999999999632 356899999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCC-----------CCchHHHHHHHH
Q 001922 839 IDGGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFG-----------DGVDIVQWSKRA 906 (995)
Q Consensus 839 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~-----------~~~~~~~~~~~~ 906 (995)
...... .......+|..|+|||++.+..++.++||||+|+++|+|++|+.|+.... ............
T Consensus 177 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (302)
T 4e5w_A 177 ETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTL 256 (302)
T ss_dssp CTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHH
T ss_pred cCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHH
Confidence 543221 22344568889999999999999999999999999999999999864310 011111111111
Q ss_pred hcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 907 TNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
. .......+...+..+.+++.+||+.||++|||++|+++.|+++.
T Consensus 257 ~-----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 257 K-----------EGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp H-----------TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred h-----------ccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 1 11112234456678999999999999999999999999998763
No 107
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.2e-39 Score=364.71 Aligned_cols=254 Identities=21% Similarity=0.245 Sum_probs=203.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..++||+|+||+||+|+.+ +++.||+|++.+.. .....+.+..|..++.++ +||||+++++++.+.+..|+
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 357889999999999999999875 57889999985432 222345578899999887 89999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 131 V~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 205 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 205 (396)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEcCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEECCCCCEEEeecceeeeccc
Confidence 9999999999999964 356899999999999999999999887 99999999999999999999999999986322
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCch-----HHHHHHHHhcCChhhhh
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVD-----IVQWSKRATNGRKEEFL 915 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~ 915 (995)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+...
T Consensus 206 ~--~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------ 277 (396)
T 4dc2_A 206 P--GDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------ 277 (396)
T ss_dssp T--TCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHC------
T ss_pred C--CCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhcc------
Confidence 2 2233567899999999999999999999999999999999999999965332111 11111111111
Q ss_pred hhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCH------HHHHHH
Q 001922 916 SILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRM------REVVQM 957 (995)
Q Consensus 916 ~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~~ 957 (995)
. ...|...+..+.+++.+||+.||++||++ +|++++
T Consensus 278 -----~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~H 319 (396)
T 4dc2_A 278 -----Q-IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 319 (396)
T ss_dssp -----C-CCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHS
T ss_pred -----c-cCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcC
Confidence 1 12334456678999999999999999985 566653
No 108
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-38 Score=348.92 Aligned_cols=264 Identities=24% Similarity=0.281 Sum_probs=204.5
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||+||+|+.. +++.||+|++..... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999874 689999999854333 3334678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++ ++.+.+.. ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~~-~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~---ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 154 (292)
T 3o0g_A 82 FCDQ-DLKKYFDS-CNGDLDPEIVKSFLFQLLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIP-- 154 (292)
T ss_dssp CCSE-EHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCSC--
T ss_pred cCCC-CHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceecCCc--
Confidence 9976 66666543 3456899999999999999999999887 999999999999999999999999999876432
Q ss_pred CccccccccCcccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhc-CChhhhhhhc---
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLR-VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATN-GRKEEFLSIL--- 918 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--- 918 (995)
........||+.|+|||++.+.. ++.++||||+||++|||++|..||....+..+.......... .....+....
T Consensus 155 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 22234567899999999988766 799999999999999999999987544333332222222111 1111110000
Q ss_pred C----------CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 919 D----------PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 919 d----------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
+ .......+..+..+.+++.+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 0111122345667889999999999999999999986
No 109
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.2e-39 Score=348.55 Aligned_cols=256 Identities=23% Similarity=0.421 Sum_probs=211.6
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||.||+|++.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 4688889999999999999998888999999995432 23567899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++++|.+++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++...... ..
T Consensus 86 ~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~-~~ 160 (267)
T 3t9t_A 86 EHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ-YT 160 (267)
T ss_dssp TTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-HH
T ss_pred CCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEECCCCCEEEccccccccccccc-cc
Confidence 999999999743 356889999999999999999999887 9999999999999999999999999998653221 11
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||.... .......+... ....
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~----~~~~~~~i~~~-----------~~~~ 225 (267)
T 3t9t_A 161 SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS----NSEVVEDISTG-----------FRLY 225 (267)
T ss_dssp STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHHHHHHHTT-----------CCCC
T ss_pred ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC----HHHHHHHHhcC-----------CcCC
Confidence 1233457789999999998899999999999999999999 899996532 12222222221 1111
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.+...+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 226 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 226 KPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 233345678999999999999999999999999998754
No 110
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9e-39 Score=354.09 Aligned_cols=267 Identities=22% Similarity=0.282 Sum_probs=194.1
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||+||+|... +|+.||+|++...........+.+|++++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 357888999999999999999764 6899999998654444455778899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCC----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 764 YMRNGSLGEALHGK----KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 764 ~~~~gsL~~~l~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
|++ |+|.+++... ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++...
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 159 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFG 159 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCSSCEETT
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCChHHeEEcCCCCEEECcCccceecC
Confidence 998 5999988632 2345889999999999999999999887 9999999999999999999999999998754
Q ss_pred cCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh-
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI- 917 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~- 917 (995)
... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+..................+...
T Consensus 160 ~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 160 IPV--NTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp SCC--CCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGG
T ss_pred CCc--ccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhh
Confidence 321 22245578999999999876 46899999999999999999999999764433222222222211111110000
Q ss_pred ----cCCcCC-------------CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 918 ----LDPRLS-------------MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 918 ----~d~~~~-------------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+... ..+...+..+.+++.+||+.||++|||++|+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~h 294 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHH 294 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCC
Confidence 000000 0011234578999999999999999999999864
No 111
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=1.2e-38 Score=344.93 Aligned_cols=254 Identities=28% Similarity=0.403 Sum_probs=196.9
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC---CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT---HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||.||+|++ .++.||||++..... ....+.+.+|+++++.++||||+++++++.+++..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEE-TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEE-cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 4678889999999999999987 488999999854322 223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--------CCCeEEeeecc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS--------AFEAHVADFGL 834 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~--------~~~vkl~DfGl 834 (995)
||+++++|.+++. ...+++..++.++.|++.|+.|||+++..+|+||||||+||+++. ++.+||+|||+
T Consensus 86 e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~ 162 (271)
T 3dtc_A 86 EFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGL 162 (271)
T ss_dssp ECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC
T ss_pred EcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCc
Confidence 9999999999985 346899999999999999999999876445889999999999986 67899999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
++...... .....||+.|+|||++.+..++.++||||+|+++|+|++|+.||...... .........
T Consensus 163 ~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~----~~~~~~~~~----- 229 (271)
T 3dtc_A 163 AREWHRTT----KMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL----AVAYGVAMN----- 229 (271)
T ss_dssp -----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH----HHHHHHHTS-----
T ss_pred cccccccc----ccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH----HHHHhhhcC-----
Confidence 98654322 22457899999999999999999999999999999999999999653221 111111111
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccC
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEF 961 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 961 (995)
......+..++..+.+++.+||+.||++||+++|++++|+++
T Consensus 230 -----~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 230 -----KLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -----CCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -----CCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 111123344566799999999999999999999999999864
No 112
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.4e-39 Score=356.08 Aligned_cols=262 Identities=26% Similarity=0.396 Sum_probs=213.4
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCC-
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKE- 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~- 756 (995)
.++|+..+.||+|+||+||+|++ .+++.||||++...........+.+|+.+++++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 46789999999999999999974 356889999996544444456789999999999 6999999999987654
Q ss_pred cceEEEEeccCCChhhhhcCCCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKG--------------AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN 822 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~ 822 (995)
..++||||+++|+|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRK---CIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCC---cccccCccceEEEC
Confidence 58999999999999999975432 22789999999999999999999887 99999999999999
Q ss_pred CCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHH
Q 001922 823 SAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQ 901 (995)
Q Consensus 823 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~ 901 (995)
.++.+||+|||+++.+.............+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...........
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~ 262 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCR 262 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHH
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHH
Confidence 999999999999987654433333445668899999999999999999999999999999998 9999976543333222
Q ss_pred HHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 902 WSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 902 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
...... ....+...+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 263 ~~~~~~--------------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 310 (316)
T 2xir_A 263 RLKEGT--------------RMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 310 (316)
T ss_dssp HHHHTC--------------CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HhccCc--------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 211110 011223345678999999999999999999999999988753
No 113
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.9e-39 Score=351.56 Aligned_cols=263 Identities=18% Similarity=0.217 Sum_probs=211.0
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ....+.+|+.+++++ +|++++++++++.+....++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35688899999999999999985 578999999985332 234578899999999 7999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC-----eEEeeeccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE-----AHVADFGLAKF 837 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~-----vkl~DfGla~~ 837 (995)
||+ +++|.+++... +..+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+++.
T Consensus 86 e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 86 DLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKS---LVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred Eec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 999 99999999743 446899999999999999999999777 999999999999988776 99999999987
Q ss_pred cccCCCC-----ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 838 LIDGGAS-----ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 838 ~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
....... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||.............. +......
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~ 239 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER-IGEKKQS 239 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHH-HHHHHHH
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHH-HHhhccC
Confidence 6543322 123456799999999999999999999999999999999999999977543333222211 1111000
Q ss_pred hhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 913 EFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 913 ~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.... ......+..+.+++.+||+.||++||++++|++.|+++.+
T Consensus 240 ~~~~-------~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~ 283 (298)
T 1csn_A 240 TPLR-------ELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLE 283 (298)
T ss_dssp SCHH-------HHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred ccHH-------HHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHH
Confidence 0000 0111245678999999999999999999999999998764
No 114
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=350.96 Aligned_cols=258 Identities=28% Similarity=0.487 Sum_probs=202.2
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||+||+|++ .++.||+|++.. ....+.+.+|++++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKW-RAKDVAIKQIES---ESERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE-TTEEEEEEECSS---TTHHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEE-CCeeEEEEEecC---hhHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 4678889999999999999988 478999999842 345677899999999999999999999886 4589999999
Q ss_pred cCCChhhhhcCCCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC-eEEeeeccccccccCCC
Q 001922 766 RNGSLGEALHGKKG-AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE-AHVADFGLAKFLIDGGA 843 (995)
Q Consensus 766 ~~gsL~~~l~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~-vkl~DfGla~~~~~~~~ 843 (995)
++|+|.+++..... ..+++..++.++.|+++||+|||+.+.++|+||||||+||+++.++. +||+|||++......
T Consensus 82 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~-- 159 (307)
T 2eva_A 82 EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH-- 159 (307)
T ss_dssp TTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC---------
T ss_pred CCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc--
Confidence 99999999975432 34788999999999999999999832244999999999999998887 799999999765321
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||...........+ ..... ...
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~--~~~~~-----------~~~ 223 (307)
T 2eva_A 160 ---MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMW--AVHNG-----------TRP 223 (307)
T ss_dssp --------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHH--HHHTT-----------CCC
T ss_pred ---cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHH--HHhcC-----------CCC
Confidence 23446899999999999999999999999999999999999999764433221111 11111 111
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcc
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSD 967 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 967 (995)
..+...+..+.+++.+||+.||++||+++|+++.|+.+.+..+.
T Consensus 224 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~ 267 (307)
T 2eva_A 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPG 267 (307)
T ss_dssp CCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCC
T ss_pred CcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccC
Confidence 12234456788999999999999999999999999988765443
No 115
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=2.2e-38 Score=343.82 Aligned_cols=254 Identities=22% Similarity=0.285 Sum_probs=209.5
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
..++|+..+.||+|+||.||+|+.. +++.||+|++.........+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 84 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL 84 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEE
Confidence 4678999999999999999999874 689999999865444455677899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||.+..+....
T Consensus 85 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 159 (276)
T 2yex_A 85 EYCSGGELFDRIEP--DIGMPEPDAQRFFHQLMAGVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNN 159 (276)
T ss_dssp ECCTTEEGGGGSBT--TTBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEECEETT
T ss_pred EecCCCcHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCChHHEEEccCCCEEEeeCCCccccCCCc
Confidence 99999999999963 456899999999999999999999887 9999999999999999999999999998764433
Q ss_pred CCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchH-HHHHHHHhcCChhhhhhhcCC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDI-VQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.........|++.|+|||++.+..+ +.++||||+|+++|||++|+.||......... ..+.. .. .
T Consensus 160 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~---~~-~--------- 226 (276)
T 2yex_A 160 RERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE---KK-T--------- 226 (276)
T ss_dssp EECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHT---TC-T---------
T ss_pred chhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhh---cc-c---------
Confidence 3333345679999999999987765 78999999999999999999999765433221 11111 00 0
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
........+..+.+++.+||+.||++|||++|+++
T Consensus 227 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 227 -YLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp -TSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -ccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 00111234567889999999999999999999976
No 116
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.2e-38 Score=355.81 Aligned_cols=252 Identities=23% Similarity=0.281 Sum_probs=204.0
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCC----CCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGF----GTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
+.+.|+..+.||+|+||+||+|+. .+++.||||++... ......+.+.+|+.++++++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356799999999999999999976 46899999998421 1222467789999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC---eEEeeec
Q 001922 759 LLVYEYMRNGSLGEALHGK--KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE---AHVADFG 833 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~---vkl~DfG 833 (995)
|+||||+++|+|.+++... .+..+++..++.++.||+.||.|||+++ |+||||||+||+++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChHHeEEecCCCCCcEEEecCc
Confidence 9999999999998887532 2345899999999999999999999887 999999999999987654 9999999
Q ss_pred cccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
+++...... .......||+.|+|||++.+..++.++||||+||++|+|++|+.||.... . .....+...
T Consensus 179 ~a~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~---~~~~~i~~~---- 247 (351)
T 3c0i_A 179 VAIQLGESG--LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--E---RLFEGIIKG---- 247 (351)
T ss_dssp TCEECCTTS--CBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--H---HHHHHHHHT----
T ss_pred ceeEecCCC--eeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--H---HHHHHHHcC----
Confidence 998764422 22345679999999999999999999999999999999999999996521 1 111111111
Q ss_pred hhhhcCCcCCCCC---HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 914 FLSILDPRLSMVP---KEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 914 ~~~~~d~~~~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.....+ ...+..+.+++.+||+.||++||++.|+++
T Consensus 248 -------~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 248 -------KYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp -------CCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -------CCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 111111 123567889999999999999999999986
No 117
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.4e-39 Score=362.71 Aligned_cols=249 Identities=22% Similarity=0.248 Sum_probs=200.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||+||+|+.+ +++.||||++.+.. .....+.+.+|..+++.+ +||||+++++++.+.+..|+
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 457888999999999999999864 58999999985321 122345678899999988 69999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 102 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NILl~~~g~ikL~DFG~a~~~~~ 176 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQK--SRRFDEARARFYAAEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIC 176 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CcccCCCHHHEEECCCCCEEEccccceeeccc
Confidence 9999999999999964 356899999999999999999999887 99999999999999999999999999985432
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+...
T Consensus 177 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~----~~~~~~~i~~~----------- 239 (353)
T 3txo_A 177 N--GVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAEN----EDDLFEAILND----------- 239 (353)
T ss_dssp -----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC-----------
T ss_pred C--CccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCC----HHHHHHHHHcC-----------
Confidence 2 222345689999999999999899999999999999999999999996532 22222222211
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCH------HHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRM------REVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~ 956 (995)
. ...+...+..+.+++.+|++.||++||++ +|+++
T Consensus 240 ~-~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 240 E-VVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp C-CCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred C-CCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 1 11233355678899999999999999998 77775
No 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=4.8e-39 Score=349.68 Aligned_cols=256 Identities=29% Similarity=0.431 Sum_probs=210.3
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||.||+|+..+++.||+|++.... ...+.+.+|++++++++||||+++++++. .+..++||||+
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 89 (279)
T 1qpc_A 13 ETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYM 89 (279)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECC
T ss_pred HhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecC
Confidence 5788899999999999999998888899999985432 34677999999999999999999999986 45689999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++++|.+++....+..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++........ .
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY-T 165 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE-E
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHhhEEEcCCCCEEECCCcccccccCccc-c
Confidence 9999999996543346899999999999999999999887 99999999999999999999999999987643321 1
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......+++.|+|||++.+..++.++||||+|+++|||++ |+.||..... .+........ ....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~----~~~~~~~~~~-----------~~~~ 230 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN----PEVIQNLERG-----------YRMV 230 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTT-----------CCCC
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH----HHHHHHHhcc-----------cCCC
Confidence 2234457789999999998889999999999999999999 9999965322 1222222211 0111
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.+...+..+.+++.+|++.||++||+++++++.|+++..
T Consensus 231 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 269 (279)
T 1qpc_A 231 RPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFT 269 (279)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHH
Confidence 233455678999999999999999999999999998754
No 119
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1e-38 Score=352.61 Aligned_cols=246 Identities=24% Similarity=0.291 Sum_probs=204.4
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||+||+|+.. +|+.||+|++.+.. .....+.+.+|..+++.++||||+++++++.+.+..|+||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888999999999999999774 68999999985321 1233566888999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 86 e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~-- 158 (318)
T 1fot_A 86 DYIEGGELFSLLRK--SQRFPNPVAKFYAAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVPD-- 158 (318)
T ss_dssp CCCCSCBHHHHHHH--TSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEECTTSCEEECCCSSCEECSS--
T ss_pred eCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChheEEEcCCCCEEEeecCcceecCC--
Confidence 99999999999964 356899999999999999999999777 99999999999999999999999999987532
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+... ..
T Consensus 159 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~----~~~~~~i~~~-----------~~ 220 (318)
T 1fot_A 159 ---VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT----MKTYEKILNA-----------EL 220 (318)
T ss_dssp ---CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHHC-----------CC
T ss_pred ---ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH----HHHHHHHHhC-----------CC
Confidence 22356799999999999999999999999999999999999999965321 1122222111 11
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQM 957 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 957 (995)
..+...+..+.+++.+|++.||++|| +++|++++
T Consensus 221 -~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~h 259 (318)
T 1fot_A 221 -RFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNH 259 (318)
T ss_dssp -CCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTS
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcC
Confidence 12334456789999999999999999 89999854
No 120
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=7.9e-39 Score=356.88 Aligned_cols=261 Identities=18% Similarity=0.229 Sum_probs=209.1
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||+||+|+. .+++.||||++.... ..+.+.+|+++++++ +||||+++++++..++..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS---RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC---SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc---chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5688899999999999999986 578999999985332 234588999999999 89999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC-----eEEeeecccccc
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE-----AHVADFGLAKFL 838 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~-----vkl~DfGla~~~ 838 (995)
|+ +++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+|||+++.+
T Consensus 86 ~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~ 160 (330)
T 2izr_A 86 LL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKN---LIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEY 160 (330)
T ss_dssp CC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTCTTSEEECCCTTCEES
T ss_pred eC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeeccCCCCCCceEEEEEcccceee
Confidence 99 99999999743 457999999999999999999999887 999999999999999887 999999999876
Q ss_pred ccCCCCc-----cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 839 IDGGASE-----CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 839 ~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ .+....+.......
T Consensus 161 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~-~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 161 IDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTL-KERYQKIGDTKRAT 239 (330)
T ss_dssp BCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSH-HHHHHHHHHHHHHS
T ss_pred ecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccH-HHHHHHHHhhhccC
Confidence 5433221 12456799999999999999999999999999999999999999976543322 22222221110000
Q ss_pred hhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 914 FLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 914 ~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
..... ....+ .+.+++.+||+.||.+||++++|.+.|+++..
T Consensus 240 ~~~~~-------~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~ 281 (330)
T 2izr_A 240 PIEVL-------CENFP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFD 281 (330)
T ss_dssp CHHHH-------TTTCH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHH
T ss_pred CHHHH-------hccCh-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHH
Confidence 00000 01123 79999999999999999999999999987653
No 121
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.1e-39 Score=360.77 Aligned_cols=262 Identities=23% Similarity=0.369 Sum_probs=214.1
Q ss_pred HhhccCCCeeeccCceEEEEEEeCC------CcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPN------GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~ 757 (995)
.++|+..+.||+|+||+||+|+... +..||+|.+.........+.+.+|+.+++++ +||||+++++++.+++.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3568888999999999999997632 2479999996554444567789999999999 89999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 001922 758 NLLVYEYMRNGSLGEALHGKK------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF 825 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~ 825 (995)
.++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCC---cccCCcccceEEECCCC
Confidence 999999999999999986421 345789999999999999999999887 99999999999999999
Q ss_pred CeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHH
Q 001922 826 EAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSK 904 (995)
Q Consensus 826 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~ 904 (995)
.+||+|||+++...............+|+.|+|||++.+..++.++||||||+++|||++ |..||..............
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 281 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVK 281 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHH
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHh
Confidence 999999999987654433333345567889999999999899999999999999999999 9999976544333332222
Q ss_pred HHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 905 RATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 905 ~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.... ...+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 282 ~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~ 326 (333)
T 2i1m_A 282 DGYQ--------------MAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQ 326 (333)
T ss_dssp HTCC--------------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCC--------------CCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHH
Confidence 1110 11122345678999999999999999999999999987653
No 122
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.8e-39 Score=362.69 Aligned_cols=255 Identities=19% Similarity=0.237 Sum_probs=206.8
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.+.+.|+..+.||+|+||+||+|... +++.||+|++... .......+.+|+.++++++||||+++++++.+....++|
T Consensus 48 ~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 126 (387)
T 1kob_A 48 SVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP-YPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLI 126 (387)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEE
T ss_pred ccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc-chhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEE
Confidence 34678999999999999999999764 6889999988432 223455788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC--CCCeEEeeeccccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS--AFEAHVADFGLAKFLI 839 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~--~~~vkl~DfGla~~~~ 839 (995)
|||+++|+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++. .+.+||+|||+++.+.
T Consensus 127 ~E~~~gg~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~ 202 (387)
T 1kob_A 127 LEFLSGGELFDRIAA-EDYKMSEAEVINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLN 202 (387)
T ss_dssp EECCCCCBHHHHTTC-TTCCBCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSTTCCCEEECCCTTCEECC
T ss_pred EEcCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccchHHeEEecCCCCceEEEecccceecC
Confidence 999999999999964 3456899999999999999999999887 999999999999974 4679999999998764
Q ss_pred cCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
... ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+...... .+
T Consensus 203 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~----~~~~~~i~~~~~~-----~~ 270 (387)
T 1kob_A 203 PDE---IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD----LETLQNVKRCDWE-----FD 270 (387)
T ss_dssp TTS---CEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHHHCCCC-----CC
T ss_pred CCc---ceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCC-----CC
Confidence 322 22445799999999999999999999999999999999999999965322 1111111111000 00
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.......+..+.+++.+||+.||++|||++|+++.
T Consensus 271 ---~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 271 ---EDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp ---SSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ---ccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 11122345678899999999999999999999975
No 123
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.5e-38 Score=344.14 Aligned_cols=255 Identities=22% Similarity=0.346 Sum_probs=207.0
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecC--CcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK--ETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~lv~ 762 (995)
++|+..+.||+|+||+||+|++ +++.||||++..... ....+.+.+|+.++++++||||+++++++.+. ...++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRW-QGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEE-CCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 5688889999999999999998 488999999854332 23345689999999999999999999999877 7889999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++.......+++..++.++.|++.||+|||+.+ ..|+||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLE-PLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSS-SCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS---
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCC-CceecCCCccceEEEcCCcceeEEeccceeeec---
Confidence 9999999999998665557999999999999999999999542 339999999999999999999999999875431
Q ss_pred CCccccccccCcccccccccccCCCCc---ccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDE---KSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
.....||+.|+|||++.+..++. ++||||+|+++|||++|+.||......... .......
T Consensus 165 ----~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~---~~~~~~~---------- 227 (271)
T 3kmu_A 165 ----SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIG---MKVALEG---------- 227 (271)
T ss_dssp ----CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHH---HHHHHSC----------
T ss_pred ----ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHH---HHHHhcC----------
Confidence 12346899999999988765544 799999999999999999999653221111 1111111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.....+...+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 228 -~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 228 -LRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred -CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1112334456679999999999999999999999999998765
No 124
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=3.7e-38 Score=344.22 Aligned_cols=255 Identities=30% Similarity=0.521 Sum_probs=203.5
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChh------HHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHD------HGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
++|+..+.||+|+||+||+|+. .+++.||+|++......... +.+.+|++++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 5688889999999999999976 57899999998543332221 57889999999999999999999996654
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC-----eEEeeec
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE-----AHVADFG 833 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~-----vkl~DfG 833 (995)
++||||+++|+|.+++.. ....+++..++.++.|++.|++|||+++ ++|+||||||+||+++.++. +||+|||
T Consensus 97 ~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~l~~~l~~lH~~~-~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg 174 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD-KAHPIKWSVKLRLMLDIALGIEYMQNQN-PPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174 (287)
T ss_dssp EEEEECCTTCBHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred eEEEEecCCCCHHHHHhc-ccCCccHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence 799999999999998864 3457899999999999999999999542 23999999999999988776 9999999
Q ss_pred cccccccCCCCccccccccCcccccccccc--cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAY--TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
+++.... ......||+.|+|||++. ...++.++||||+|+++|||++|+.||........ .........
T Consensus 175 ~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~--~~~~~~~~~-- 245 (287)
T 4f0f_A 175 LSQQSVH-----SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKI--KFINMIREE-- 245 (287)
T ss_dssp TCBCCSS-----CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHH--HHHHHHHHS--
T ss_pred ccccccc-----cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHH--HHHHHHhcc--
Confidence 9985422 234567999999999984 45678999999999999999999999976443222 111111111
Q ss_pred hhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccC
Q 001922 912 EEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEF 961 (995)
Q Consensus 912 ~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~ 961 (995)
......+...+..+.+++.+||+.||++||+++|+++.|+++
T Consensus 246 --------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 246 --------GLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp --------CCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred --------CCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 011123345567899999999999999999999999999875
No 125
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=357.81 Aligned_cols=252 Identities=24% Similarity=0.295 Sum_probs=190.8
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.+.|+..+.||+|+||+||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+++..++||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 127 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVL 127 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEE
Confidence 3467889999999999999999875 57899999985432 3456888999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCCeEEeeeccccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS---AFEAHVADFGLAKFLI 839 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~---~~~vkl~DfGla~~~~ 839 (995)
||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++...
T Consensus 128 e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~ 202 (349)
T 2w4o_A 128 ELVTGGELFDRIVE--KGYYSERDAADAVKQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE 202 (349)
T ss_dssp CCCCSCBHHHHHTT--CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESSSSTTCCEEECCCC------
T ss_pred EeCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCcccEEEecCCCCCCEEEccCccccccC
Confidence 99999999999953 456899999999999999999999887 999999999999975 8899999999998653
Q ss_pred cCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||......... ...+...... ...
T Consensus 203 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~---~~~i~~~~~~----~~~ 272 (349)
T 2w4o_A 203 HQ---VLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFM---FRRILNCEYY----FIS 272 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHH---HHHHHTTCCC----CCT
T ss_pred cc---cccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHH---HHHHHhCCCc----cCC
Confidence 32 2224567999999999999999999999999999999999999999654332211 1111111100 001
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
......+..+.+++.+||+.||++||+++|+++.
T Consensus 273 ----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 273 ----PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp ----TTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----chhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112345678899999999999999999999874
No 126
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.2e-39 Score=351.86 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=215.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||+||+|.+. +++.||+|++.. .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE--DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECS--CSTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCc--CHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 456888899999999999999875 488899999854 33446778999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++++|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~- 165 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT- 165 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHT---CCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS-
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCC---ccCCCCCcceEEEcCCCCEEEccCccceeccCCc-
Confidence 999999999998766677999999999999999999999888 9999999999999999999999999998764332
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
........+|+.|+|||++.+..++.++||||+|+++|+|++ |..||...... ..... .... ..
T Consensus 166 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~-~~~~~---~~~~-----------~~ 230 (288)
T 3kfa_A 166 YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS-QVYEL---LEKD-----------YR 230 (288)
T ss_dssp SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGG-GHHHH---HHTT-----------CC
T ss_pred cccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-HHHHH---Hhcc-----------CC
Confidence 223344567889999999998999999999999999999999 99999653322 11111 1111 01
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
...+...+..+.+++.+|++.||++||+++|+++.|+++...
T Consensus 231 ~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~ 272 (288)
T 3kfa_A 231 MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 272 (288)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHh
Confidence 122334556799999999999999999999999999887653
No 127
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=9.3e-39 Score=374.88 Aligned_cols=254 Identities=24% Similarity=0.275 Sum_probs=210.3
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.|+..++||+|+||.||+|+.. +|+.||+|++.... .......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 184 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 263 (576)
T 2acx_A 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 263 (576)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEE
Confidence 46888899999999999999774 68999999984321 2233556889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||++||+|.+++.......+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.+....
T Consensus 264 Ey~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~g---IvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~ 340 (576)
T 2acx_A 264 TLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ 340 (576)
T ss_dssp CCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCTTC
T ss_pred EcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeccCCchheEEEeCCCCeEEEecccceecccCc
Confidence 9999999999997655556999999999999999999999887 9999999999999999999999999998764332
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
.....+||+.|+|||++.+..++.++||||+||++|||++|+.||...............+....
T Consensus 341 ---~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~------------ 405 (576)
T 2acx_A 341 ---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVP------------ 405 (576)
T ss_dssp ---CEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCC------------
T ss_pred ---cccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhccc------------
Confidence 22445899999999999999999999999999999999999999976543333333322222110
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQM 957 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 406 ~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 406 EEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred ccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 112334556789999999999999999 78888764
No 128
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.5e-39 Score=363.61 Aligned_cols=259 Identities=30% Similarity=0.429 Sum_probs=198.0
Q ss_pred hccCCCeeeccCceEEEEEEeC--CC--cEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEe-cCCcceEE
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMP--NG--VEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCS-NKETNLLV 761 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~-~~~~~~lv 761 (995)
.|+..+.||+|+||+||+|+.. ++ ..||||.+.........+.+.+|+.++++++||||+++++++. ..+..++|
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999753 22 4589998865555555678999999999999999999999864 45678999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ....+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 170 ~e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKFLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EECCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EECCCCCCHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHHHCC---EecCccchheEEECCCCCEEEeecccccccccc
Confidence 999999999999974 3456889999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCc--cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 842 GASE--CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 842 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... ......+|+.|+|||++.+..++.++|||||||++|||++ |..||....... ..... ...
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~-~~~~~---~~~--------- 312 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD-ITVYL---LQG--------- 312 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSC-HHHHH---HTT---------
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHH-HHHHH---HcC---------
Confidence 2211 1233457889999999999999999999999999999999 677776543322 22111 111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 313 --~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~ 356 (373)
T 3c1x_A 313 --RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 356 (373)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11122334566799999999999999999999999999987653
No 129
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.7e-39 Score=349.11 Aligned_cols=257 Identities=25% Similarity=0.332 Sum_probs=208.8
Q ss_pred hccCCC-eeeccCceEEEEEEeC---CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 687 CVKDGN-VIGRGGAGIVYHGKMP---NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 687 ~~~~~~-~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+|...+ .||+|+||.||+|.+. +++.||+|++.........+.+.+|++++++++||||+++++++. .+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-SSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-CCCcEEEE
Confidence 444544 8999999999999753 578899999965544445677899999999999999999999994 56789999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 89 EMAGGGPLHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp ECCTTEEHHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred EeCCCCCHHHHHHh-CCccCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 99999999999963 3456899999999999999999999887 9999999999999999999999999998764332
Q ss_pred CC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 843 AS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 843 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||...... . ....+...
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~---~~~~i~~~----------- 229 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-E---VMAFIEQG----------- 229 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH-H---HHHHHHTT-----------
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH-H---HHHHHhcC-----------
Confidence 21 11233456889999999988889999999999999999998 99999654321 1 11122111
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 230 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~ 272 (287)
T 1u59_A 230 KRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 272 (287)
T ss_dssp CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112334556789999999999999999999999999988753
No 130
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=9.7e-38 Score=365.15 Aligned_cols=147 Identities=26% Similarity=0.339 Sum_probs=88.3
Q ss_pred CCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeec
Q 001922 90 RLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDL 169 (995)
Q Consensus 90 ~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L 169 (995)
.++++++|+++++.++....+..+++|++|+|++|.+++..+ +..+++|++|++++|.+++..+ +.++++|++|+|
T Consensus 44 ~l~~l~~L~l~~~~i~~l~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L 119 (466)
T 1o6v_A 44 DLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTL 119 (466)
T ss_dssp HHHTCCEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred HhccccEEecCCCCCccCcchhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEEC
Confidence 356677777777777655556667777777777777776554 6667777777777777766443 666777777777
Q ss_pred cCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCC
Q 001922 170 GGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELD 248 (995)
Q Consensus 170 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~ 248 (995)
++|.+++. +. +..+++|++|++++|.+++. + .++++++|++|+++ ++... + ..+..+++|++|++++|.++
T Consensus 120 ~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~--~-~~~~~l~~L~~L~l~~n~l~ 190 (466)
T 1o6v_A 120 FNNQITDI-DP-LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTD--L-KPLANLTTLERLDISSNKVS 190 (466)
T ss_dssp CSSCCCCC-GG-GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCC--C-GGGTTCTTCCEEECCSSCCC
T ss_pred CCCCCCCC-hH-HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccC--c-hhhccCCCCCEEECcCCcCC
Confidence 77766643 22 66667777777777766642 2 35555555555554 22211 1 12444455555555555444
No 131
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.6e-39 Score=383.42 Aligned_cols=262 Identities=29% Similarity=0.417 Sum_probs=214.7
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
++|+..+.||+|+||+||+|++..+..||||++.... ...+.|.+|++++++++||||+++++++.+ +..|+||||+
T Consensus 267 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~ 343 (535)
T 2h8h_A 267 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 343 (535)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCC
T ss_pred hhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehh
Confidence 5678889999999999999999888899999996432 335679999999999999999999999976 6789999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~ 845 (995)
++|+|.+++....+..+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++.+.... ..
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-~~ 419 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNE-YT 419 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH-HH
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHhhEEEcCCCcEEEcccccceecCCCc-ee
Confidence 9999999997544456899999999999999999999887 9999999999999999999999999998653211 11
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSM 924 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 924 (995)
......++..|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+..+. ...
T Consensus 420 ~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~----~~~~~~i~~~~-----------~~~ 484 (535)
T 2h8h_A 420 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN----REVLDQVERGY-----------RMP 484 (535)
T ss_dssp TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH----HHHHHHHHTTC-----------CCC
T ss_pred cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcCC-----------CCC
Confidence 1223456789999999999999999999999999999999 9999965322 12222222110 111
Q ss_pred CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcccc
Q 001922 925 VPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSDFN 969 (995)
Q Consensus 925 ~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 969 (995)
.+..++..+.++|.+||+.||++||++++|++.|+++.......+
T Consensus 485 ~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~~~ 529 (535)
T 2h8h_A 485 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEPQY 529 (535)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSCSS
T ss_pred CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCccc
Confidence 234556789999999999999999999999999999876654443
No 132
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=8.6e-39 Score=360.32 Aligned_cols=253 Identities=23% Similarity=0.246 Sum_probs=197.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 357889999999999999999875 78999999985432 234668899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC--eEEeeeccccccccC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE--AHVADFGLAKFLIDG 841 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~--vkl~DfGla~~~~~~ 841 (995)
|+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++. +||+|||+++.....
T Consensus 97 ~~~~~~L~~~l~~--~~~~~~~~~~~i~~ql~~~L~~LH~~~---ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~ 171 (361)
T 3uc3_A 97 YASGGELYERICN--AGRFSEDEARFFFQQLLSGVSYCHSMQ---ICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH 171 (361)
T ss_dssp CCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCSCCCCGGGEEECSSSSCCEEECCCCCC------
T ss_pred eCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCceEEEeecCcccccccc
Confidence 9999999999853 346899999999999999999999887 999999999999987765 999999999753222
Q ss_pred CCCccccccccCcccccccccccCCCCcc-cchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEK-SDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.......||+.|+|||++.+..++.+ +||||+||++|+|++|+.||...............+.....
T Consensus 172 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~--------- 239 (361)
T 3uc3_A 172 ---SQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKY--------- 239 (361)
T ss_dssp ------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCC---------
T ss_pred ---CCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCC---------
Confidence 22244579999999999988887655 89999999999999999999876555554444443332211
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+ .....+..+.+++.+||+.||++|||++|++++
T Consensus 240 ~~~-~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 240 SIP-DDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp CCC-TTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred CCC-CcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 000 011234568899999999999999999999975
No 133
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.5e-39 Score=358.33 Aligned_cols=262 Identities=30% Similarity=0.452 Sum_probs=205.7
Q ss_pred hhccCCCeeeccCceEEEEEEeCC-----CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPN-----GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+.||+|+||+||+|+... +..||+|++...........+.+|+.++++++||||+++++++.+.+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 456778899999999999997642 245999998654444445678899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 124 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 199 (333)
T 1mqb_A 124 ITEYMENGALDKFLRE-KDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 199 (333)
T ss_dssp EEECCTTEEHHHHHHH-TTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECCCCC------
T ss_pred EEeCCCCCcHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChheEEECCCCcEEECCCCcchhhcc
Confidence 9999999999999974 3456899999999999999999999887 99999999999999999999999999987643
Q ss_pred CCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 841 GGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 841 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... .......+|+.|+|||++.+..++.++||||+|+++|||++ |+.||..... ......+...
T Consensus 200 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~----~~~~~~~~~~--------- 266 (333)
T 1mqb_A 200 DPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN----HEVMKAINDG--------- 266 (333)
T ss_dssp -----------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTT---------
T ss_pred ccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH----HHHHHHHHCC---------
Confidence 3211 11223446789999999999999999999999999999999 9999965322 1122222111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++.+...
T Consensus 267 --~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 267 --FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp --CCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred --CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 1111233456678999999999999999999999999998876443
No 134
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=7.5e-39 Score=367.52 Aligned_cols=257 Identities=24% Similarity=0.229 Sum_probs=204.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..++||+|+||+||+|+.+ +++.||+|++.+.. .......+.+|..++..++||||++++++|.+++..|+|
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 152 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEE
Confidence 467899999999999999999875 47889999984311 112233488899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ....+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 153 ~Ey~~gg~L~~~l~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~ 228 (437)
T 4aw2_A 153 MDYYVGGDLLTLLSK-FEDRLPEEMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLMED 228 (437)
T ss_dssp ECCCTTCBHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EecCCCCcHHHHHHH-ccCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeeEcCCCCEEEcchhhhhhcccC
Confidence 999999999999974 2456899999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCccccccccCcccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 842 GASECMSAIAGSYGYIAPEYAY-----TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
.. ......+||+.|+|||++. ...++.++||||+||++|||++|+.||..... .+....+.... . .
T Consensus 229 ~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~~-~---~ 299 (437)
T 4aw2_A 229 GT-VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL----VETYGKIMNHK-E---R 299 (437)
T ss_dssp SC-EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHH-H---H
T ss_pred CC-cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCCh----hHHHHhhhhcc-c---c
Confidence 22 2224468999999999987 55789999999999999999999999965322 12222221110 0 0
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCC--CCCHHHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIE--RPRMREVVQM 957 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 957 (995)
...+......+..+.+++.+|+..+|++ ||+++|++++
T Consensus 300 ---~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 300 ---FQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp ---CCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred ---ccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 0111111224567889999999999988 9999999875
No 135
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.2e-38 Score=356.42 Aligned_cols=253 Identities=21% Similarity=0.250 Sum_probs=203.9
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCC--CChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT--HSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 761 (995)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... ....+.+.+|..+++++ +||||+++++++.+.+..|+|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 56888899999999999999874 588999999854322 22345678899999988 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 89 ~e~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred EeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 999999999999963 346899999999999999999999887 999999999999999999999999999864322
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCch-----HHHHHHHHhcCChhhhhh
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVD-----IVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 916 (995)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||........ .......+..
T Consensus 164 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~-------- 233 (345)
T 3a8x_A 164 G--DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-------- 233 (345)
T ss_dssp T--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH--------
T ss_pred C--CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc--------
Confidence 1 223456899999999999999999999999999999999999999965332111 1111111111
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCH------HHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRM------REVVQM 957 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~------~evl~~ 957 (995)
.. ...+...+..+.+++.+||+.||++||++ +|++++
T Consensus 234 ---~~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~h 276 (345)
T 3a8x_A 234 ---KQ-IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 276 (345)
T ss_dssp ---CC-CCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTS
T ss_pred ---CC-CCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcC
Confidence 11 11334456678999999999999999995 666643
No 136
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=1.1e-38 Score=350.32 Aligned_cols=260 Identities=30% Similarity=0.434 Sum_probs=205.2
Q ss_pred hhccCCCeeeccCceEEEEEEeCC----CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEE-ecCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPN----GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFC-SNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~l 760 (995)
.+|+..+.||+|+||+||+|+..+ +..||+|.+.........+.+.+|+.++++++||||+++++++ ..++..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357788999999999999997643 2358999986544444567789999999999999999999985 55668899
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ....+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.+.+
T Consensus 105 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~ql~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRN-ETHNPTVKDLIGFGLQVAKGMKYLASKK---FVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEECCTTCBHHHHHHC-TTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEeCCCCCCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEECCCCCEEECcccccccccc
Confidence 9999999999999974 3456889999999999999999999887 99999999999999999999999999986643
Q ss_pred CCC--CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 841 GGA--SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 841 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
... ........+|+.|+|||.+.+..++.++||||+|+++|+|++ |.+||..... .+...... ..
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~-~~~~~~~~---~~-------- 248 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT-FDITVYLL---QG-------- 248 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT-TTHHHHHH---TT--------
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH-HHHHHHHh---cC--------
Confidence 221 112234567889999999999999999999999999999999 5555544322 22221111 11
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 249 ---~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~ 292 (298)
T 3f66_A 249 ---RRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFST 292 (298)
T ss_dssp ---CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ---CCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 11112333456789999999999999999999999999987653
No 137
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.9e-39 Score=359.80 Aligned_cols=265 Identities=25% Similarity=0.346 Sum_probs=208.6
Q ss_pred ccCCCeeeccCceEEEEEEeC-----CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecC--CcceE
Q 001922 688 VKDGNVIGRGGAGIVYHGKMP-----NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK--ETNLL 760 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~--~~~~l 760 (995)
|+..+.||+|+||+||++++. +++.||||++...........+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 488899999999999988652 68899999996554444566789999999999999999999999774 56799
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 113 v~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~---ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp EECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 99999999999999643 3899999999999999999999887 99999999999999999999999999987654
Q ss_pred CCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC----hhhhh
Q 001922 841 GGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR----KEEFL 915 (995)
Q Consensus 841 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~----~~~~~ 915 (995)
.... .......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||...... ......... .....
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 261 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTK-----FLELIGIAQGQMTVLRLT 261 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHH-----HHHHHCSCCHHHHHHHHH
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchh-----hhhhhcccccchhHHHHH
Confidence 3221 1233456888999999999989999999999999999999999998642110 000000000 00011
Q ss_pred hhcC-CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 916 SILD-PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 916 ~~~d-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
..+. ......+..++..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 262 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 310 (318)
T 3lxp_A 262 ELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHE 310 (318)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHH
Confidence 1111 11122344566789999999999999999999999999988754
No 138
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.4e-38 Score=346.41 Aligned_cols=249 Identities=22% Similarity=0.277 Sum_probs=195.8
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-------------------------ChhHHHHHHHHHHhc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-------------------------SHDHGFRAEIQTLGN 739 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~ 739 (995)
++|+..+.||+|+||.||+|+. .+++.||||++...... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 5788899999999999999976 46889999998543211 123568899999999
Q ss_pred cCCCCceeEeEEEec--CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 001922 740 IRHRNIVRLLAFCSN--KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSN 817 (995)
Q Consensus 740 l~hpniv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~ 817 (995)
++||||+++++++.+ .+..|+||||+++++|.+++. ...+++..++.++.|++.||+|||+++ |+||||||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~ 166 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT---LKPLSEDQARFYFQDLIKGIEYLHYQK---IIHRDIKPS 166 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC---SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGG
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHH
Confidence 999999999999976 567899999999999998764 346899999999999999999999887 999999999
Q ss_pred CEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCC
Q 001922 818 NILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLR---VDEKSDVYSFGVVLLELLTGRRPVGDFG 894 (995)
Q Consensus 818 Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~Pf~~~~ 894 (995)
||+++.++.+||+|||+++...... .......||+.|+|||++.+.. ++.++||||+||++|||++|+.||....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~ 244 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSD--ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSS--CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred HEEECCCCCEEEecCCCcccccccc--ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCcc
Confidence 9999999999999999998764322 2234567999999999987665 4788999999999999999999996421
Q ss_pred CCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 895 DGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 895 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.......+..... ..+ .....+..+.+++.+||+.||++||+++|+++
T Consensus 245 ----~~~~~~~~~~~~~---------~~~-~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 245 ----IMCLHSKIKSQAL---------EFP-DQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ----HHHHHHHHHHCCC---------CCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ----HHHHHHHHhcccC---------CCC-CccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 2222222211100 000 11234457889999999999999999999975
No 139
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.1e-39 Score=366.75 Aligned_cols=268 Identities=24% Similarity=0.307 Sum_probs=195.4
Q ss_pred HHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccC-CCCceeEeEEEecCC--c
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKE--T 757 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~--~ 757 (995)
.+.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......++.+|+.+++++. ||||+++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 4677899999999999999999976 568999999985432 2334556788999999997 999999999996543 6
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||++ |+|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 86 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~---ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 899999997 599999864 36889999999999999999999887 99999999999999999999999999986
Q ss_pred cccCC-------------------CCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 001922 838 LIDGG-------------------ASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV 897 (995)
Q Consensus 838 ~~~~~-------------------~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~ 897 (995)
+.... ........+||+.|+|||++.+ ..++.++||||+||++|||++|+.||.......
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 53211 1112344679999999999876 678999999999999999999999997643322
Q ss_pred hHHHHHHHHhcCChhhhhhhcCC------------------cCCCC-------------CHHHHHHHHHHHhcccCCCCC
Q 001922 898 DIVQWSKRATNGRKEEFLSILDP------------------RLSMV-------------PKEEAMHLLFVAMLCIQENSI 946 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~d~------------------~~~~~-------------~~~~~~~l~~li~~cl~~dP~ 946 (995)
.+..............+..+..+ ..... ...++..+.+++.+||+.||+
T Consensus 239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~ 318 (388)
T 3oz6_A 239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN 318 (388)
T ss_dssp HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence 22222222211111111100000 00000 012345788999999999999
Q ss_pred CCCCHHHHHHH
Q 001922 947 ERPRMREVVQM 957 (995)
Q Consensus 947 ~RPt~~evl~~ 957 (995)
+|||++|++++
T Consensus 319 ~R~t~~e~l~H 329 (388)
T 3oz6_A 319 KRISANDALKH 329 (388)
T ss_dssp GSCCHHHHTTS
T ss_pred cCCCHHHHhCC
Confidence 99999999876
No 140
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.3e-38 Score=356.44 Aligned_cols=247 Identities=20% Similarity=0.211 Sum_probs=205.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+.. +|+.||+|++.... .....+.+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 357888999999999999999874 68999999984321 223356788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~ 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYLHSLD---LIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR 194 (350)
T ss_dssp EECCTTCBHHHHHHH--HCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCccceEEECCCCCEEEcccccceeccCC
Confidence 999999999999964 245899999999999999999999887 999999999999999999999999999875322
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
....+||+.|+|||++.+..++.++||||+||++|||++|+.||.... ..+....+....
T Consensus 195 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~i~~~~----------- 254 (350)
T 1rdq_E 195 -----TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQ----PIQIYEKIVSGK----------- 254 (350)
T ss_dssp -----BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHCC-----------
T ss_pred -----cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCC----HHHHHHHHHcCC-----------
Confidence 234679999999999999999999999999999999999999996432 222222222211
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPR-----MREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++||+ ++|++++
T Consensus 255 -~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h 294 (350)
T 1rdq_E 255 -VRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294 (350)
T ss_dssp -CCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTS
T ss_pred -CCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhC
Confidence 1123345667899999999999999998 8888764
No 141
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-38 Score=348.91 Aligned_cols=260 Identities=27% Similarity=0.371 Sum_probs=208.6
Q ss_pred hccCCCeeeccCceEEEEEEeC-C---CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc-eEE
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMP-N---GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN-LLV 761 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~lv 761 (995)
.|+.++.||+|+||+||+|++. + +..||+|++.........+.+.+|+.++++++||||+++++++.+.+.. ++|
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4566789999999999999753 2 2379999986544444567789999999999999999999999766655 999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+.+|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 102 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 177 (298)
T 3pls_A 102 LPYMCHGDLLQFIRS-PQRNPTVKDLISFGLQVARGMEYLAEQK---FVHRDLAARNCMLDESFTVKVADFGLARDILDR 177 (298)
T ss_dssp ECCCTTCBHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTCCEEECCTTSSCTTTTG
T ss_pred EecccCCCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEeCcCCCcccccCC
Confidence 999999999999974 3466889999999999999999999887 999999999999999999999999999865432
Q ss_pred C--CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 842 G--ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 842 ~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
. .........+|+.|+|||.+.+..++.++||||+|+++|+|++|..|+....+............
T Consensus 178 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~------------ 245 (298)
T 3pls_A 178 EYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR------------ 245 (298)
T ss_dssp GGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTC------------
T ss_pred cccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCC------------
Confidence 2 11222345688999999999999999999999999999999997666554434333332222111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
....+...+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 246 --~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 288 (298)
T 3pls_A 246 --RLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSA 288 (298)
T ss_dssp --CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred --CCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHH
Confidence 1112333456789999999999999999999999999987653
No 142
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=350.30 Aligned_cols=267 Identities=22% Similarity=0.259 Sum_probs=204.9
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC----CCChhHHHHHHHHHHhccC---CCCceeEeEEEecC
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG----THSHDHGFRAEIQTLGNIR---HRNIVRLLAFCSNK 755 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~ 755 (995)
..++|+..+.||+|+||+||+|+. .+++.||+|++.... .......+.+|+.++++++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999986 568999999985322 1122346778888887775 99999999999765
Q ss_pred C-----cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 756 E-----TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 756 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
. ..++||||+. |+|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEEe
Confidence 4 4799999997 59999998766666999999999999999999999887 9999999999999999999999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR 910 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 910 (995)
|||+++..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||....................
T Consensus 163 Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 239 (308)
T 3g33_A 163 DFGLARIYSYQ---MALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239 (308)
T ss_dssp SCSCTTTSTTC---CCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred eCccccccCCC---cccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 99999865332 223456799999999999999999999999999999999999999976443333333333222211
Q ss_pred hhhhhhhc-------CCcCC----CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 911 KEEFLSIL-------DPRLS----MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 911 ~~~~~~~~-------d~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+.... .+... ...++.+..+.+++.+|++.||++|||++|++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 297 (308)
T 3g33_A 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQH 297 (308)
T ss_dssp TTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcC
Confidence 11111000 00000 0111345678899999999999999999999863
No 143
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=1.1e-38 Score=354.72 Aligned_cols=250 Identities=24% Similarity=0.305 Sum_probs=195.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe----CCCcEEEEEEecCCCC---CChhHHHHHHHHHHhccCCCCceeEeEEEecCCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM----PNGVEIAVKKLLGFGT---HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 757 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++..... ......+.+|+.++++++||||+++++++.+.+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35788999999999999999986 4789999999854321 2234557889999999999999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLER--EGIFMEDTACFYLAEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEEECCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEEeCCCCCcHHHHHHh--CCCCCHHHHHHHHHHHHHHHHHHHhCC---EEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 9999999999999999963 346889999999999999999999887 99999999999999999999999999976
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
..... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||..... ......+...
T Consensus 171 ~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~----~~~~~~i~~~-------- 236 (327)
T 3a62_A 171 SIHDG--TVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR----KKTIDKILKC-------- 236 (327)
T ss_dssp ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH----HHHHHHHHHT--------
T ss_pred cccCC--ccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhC--------
Confidence 43221 122456799999999999999999999999999999999999999965321 1222222111
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQM 957 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 957 (995)
. ...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 237 ---~-~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~h 277 (327)
T 3a62_A 237 ---K-LNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAH 277 (327)
T ss_dssp ---C-CCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHS
T ss_pred ---C-CCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcC
Confidence 0 112334456789999999999999999 78888764
No 144
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=3e-39 Score=359.85 Aligned_cols=280 Identities=25% Similarity=0.272 Sum_probs=209.4
Q ss_pred hhccCCCeeeccCceEEEEEEe-----CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEe--cCCcc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-----PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCS--NKETN 758 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~ 758 (995)
++|+..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++. +....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS-GPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC-CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC-CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5788899999999999999983 46889999998543 3334566899999999999999999999885 45668
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 102 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRH-RARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEeecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChhhEEECCCCCEEEcccccceec
Confidence 9999999999999999642 345899999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 839 IDGGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 839 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
...... .......+|+.|+|||++.+..++.++||||+|+++|+|++|+.||....... ...+...............
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF-LRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHH-HHHCC----CCHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchh-hhhcccccccccHHHHHHH
Confidence 433221 12234568889999999999889999999999999999999999985421100 0000000000000011111
Q ss_pred -cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcccccC
Q 001922 918 -LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSDFNQS 971 (995)
Q Consensus 918 -~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~~~ 971 (995)
........+..++..+.+++.+||+.||++||+++|++++|+++..........
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~ 311 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSRGCETH 311 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----------
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhcCcccc
Confidence 111112234456678999999999999999999999999999998766554433
No 145
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5e-39 Score=358.09 Aligned_cols=262 Identities=23% Similarity=0.334 Sum_probs=208.8
Q ss_pred HhhccCCCeeeccCceEEEEEEe------CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM------PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||.||+|++ .+++.||||++...........+.+|+.++++++||||+++++++.+....
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788999999999999999974 357789999986544444566789999999999999999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCCC-----CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CCeEEe
Q 001922 759 LLVYEYMRNGSLGEALHGKKG-----AFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA---FEAHVA 830 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~-----~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~---~~vkl~ 830 (995)
|+||||+++|+|.+++..... ..+++..++.++.|++.||.|||+.+ |+||||||+||+++.+ ..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~---i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENH---FIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eecCcCCHhHEEEecCCCcceEEEC
Confidence 999999999999999975322 45889999999999999999999887 9999999999999954 469999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
|||+++...............+|+.|+|||++.+..++.++||||||+++|+|++ |+.||..... ......+...
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----~~~~~~~~~~ 261 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN----QEVLEFVTSG 261 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH----HHHHHHHHTT
T ss_pred ccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH----HHHHHHHhcC
Confidence 9999986644433333345568899999999998899999999999999999998 9999964321 1222222211
Q ss_pred ChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 910 RKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 910 ~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+.+...
T Consensus 262 -----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~ 305 (327)
T 2yfx_A 262 -----------GRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQD 305 (327)
T ss_dssp -----------CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred -----------CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcC
Confidence 11122334556789999999999999999999999999987654
No 146
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8e-39 Score=354.15 Aligned_cols=264 Identities=22% Similarity=0.335 Sum_probs=200.2
Q ss_pred HhhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCC---
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE--- 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--- 756 (995)
.++|+..+.||+|+||.||+|+.. .++.||+|++..... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 457888999999999999999653 345899999854322 233466889999999999999999999997654
Q ss_pred --cceEEEEeccCCChhhhhcC----CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 757 --TNLLVYEYMRNGSLGEALHG----KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 757 --~~~lv~e~~~~gsL~~~l~~----~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
..++||||+++|+|.+++.. .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRN---FLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCcEEEe
Confidence 34999999999999999842 23457899999999999999999999777 9999999999999999999999
Q ss_pred eeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcC
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
|||+++...............+++.|+|||.+.+..++.++||||||+++|+|++ |..||......... . ....
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~---~~~~- 264 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMY-D---YLLH- 264 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHH-H---HHHT-
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHH-H---HHHc-
Confidence 9999987654433333345567889999999999999999999999999999999 88998654322111 1 1111
Q ss_pred ChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 910 RKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 910 ~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
......+...+..+.+++.+||+.||++||++++++++|+++.+..+
T Consensus 265 ----------~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~lp 311 (313)
T 3brb_A 265 ----------GHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESLP 311 (313)
T ss_dssp ----------TCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC-
T ss_pred ----------CCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcC
Confidence 11122334456679999999999999999999999999998765544
No 147
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1e-38 Score=347.40 Aligned_cols=258 Identities=26% Similarity=0.340 Sum_probs=205.6
Q ss_pred HhhccCCCeeeccCceEEEEEEeCC----CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPN----GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||+||+|++.. +..||+|.+.........+.+.+|+.++++++||||+++++++.+ +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 3578889999999999999997532 346999998654444456778999999999999999999999875 45689
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++++|.+++.. ....+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.....
T Consensus 90 v~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 90 IMELYPYGELGHYLER-NKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEECCTTCBHHHHHHH-HTTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEecCCCCCHHHHHHh-ccccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 9999999999999964 3356899999999999999999999887 99999999999999999999999999987643
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||........ ..... ..
T Consensus 166 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~-~~~~~---~~---------- 230 (281)
T 3cc6_A 166 EDY-YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLE---KG---------- 230 (281)
T ss_dssp --------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGH-HHHHH---HT----------
T ss_pred ccc-cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHH-HHHHh---cC----------
Confidence 322 12234567889999999998899999999999999999998 9999965433221 11111 11
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 231 -~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 273 (281)
T 3cc6_A 231 -DRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273 (281)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -CCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHH
Confidence 0011223345678999999999999999999999999988754
No 148
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=5.9e-39 Score=358.09 Aligned_cols=249 Identities=24% Similarity=0.294 Sum_probs=203.7
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||.||+|+.+ +++.||+|++.... .......+..|..+++.+ +||||+++++++.+.+..|+
T Consensus 16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~l 95 (345)
T 1xjd_A 16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF 95 (345)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEE
Confidence 457888999999999999999874 68899999985321 123355678899999877 89999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 96 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 96 VMEYLNGGDLMYHIQS--CHKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999999964 346899999999999999999999887 99999999999999999999999999986432
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+....
T Consensus 171 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~----~~~~~~~i~~~~---------- 234 (345)
T 1xjd_A 171 GD--AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQD----EEELFHSIRMDN---------- 234 (345)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHCC----------
T ss_pred CC--CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCC----HHHHHHHHHhCC----------
Confidence 22 22345689999999999999999999999999999999999999996432 222222222111
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHH-HHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMR-EVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~-evl~ 956 (995)
...+...+..+.+++.+||+.||++||++. |+.+
T Consensus 235 --~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~~ 269 (345)
T 1xjd_A 235 --PFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269 (345)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGGG
T ss_pred --CCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHHc
Confidence 112333556788999999999999999997 6653
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-38 Score=367.86 Aligned_cols=248 Identities=28% Similarity=0.400 Sum_probs=205.6
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.+|+..+.||+|+||.||+|++. +|+.||||++.... .......+.+|+.+++.++||||+++++++.+.+..|+||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888999999999999999874 79999999984321 1223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++. ....+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++....+.
T Consensus 96 E~~~gg~L~~~l~--~~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 96 EYVSGGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp ECCSSEEHHHHTT--SSSSCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred eCCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 9999999999995 3457999999999999999999999777 9999999999999999999999999998764432
Q ss_pred CCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
.....+||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.+... ......+..+ .
T Consensus 171 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~----~~~~~~i~~~-----------~ 232 (476)
T 2y94_A 171 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHV----PTLFKKICDG-----------I 232 (476)
T ss_dssp ---CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSS----HHHHHHHHTT-----------C
T ss_pred ---cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCH----HHHHHHHhcC-----------C
Confidence 2345689999999999988776 6899999999999999999999965322 1222222221 1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
. ..+...+..+.+++.+||+.||++|||++|++++
T Consensus 233 ~-~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~h 267 (476)
T 2y94_A 233 F-YTPQYLNPSVISLLKHMLQVDPMKRATIKDIREH 267 (476)
T ss_dssp C-CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred c-CCCccCCHHHHHHHHHHcCCCchhCcCHHHHHhC
Confidence 1 1223345678899999999999999999999973
No 150
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.1e-38 Score=355.99 Aligned_cols=263 Identities=25% Similarity=0.249 Sum_probs=203.9
Q ss_pred cHHHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCC----CCCChhHHHHHHHHHHhccCCCCceeEeEEEec
Q 001922 680 SVSDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGF----GTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN 754 (995)
Q Consensus 680 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~----~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 754 (995)
++.++.++|+..+.||+|+||+||+|+. .+++.||+|++... ......+.+.+|++++++++||||+++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4577889999999999999999999976 46889999998432 133456779999999999999999999999999
Q ss_pred CCcceEEEEeccCCChhhhhcCC--------------------------------------CCCCCCHHHHHHHHHHHHH
Q 001922 755 KETNLLVYEYMRNGSLGEALHGK--------------------------------------KGAFLGWNLRYKIAIEAAK 796 (995)
Q Consensus 755 ~~~~~lv~e~~~~gsL~~~l~~~--------------------------------------~~~~~~~~~~~~i~~qi~~ 796 (995)
.+..++||||+++|+|.+++... ....+++..++.++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 99999999999999999998520 0122357778899999999
Q ss_pred HHHHHHhcCCCCeEecCCCCCCEEECCCC--CeEEeeeccccccccCCC--CccccccccCccccccccccc--CCCCcc
Q 001922 797 GLCYLHHDCSPLIVHRDVKSNNILLNSAF--EAHVADFGLAKFLIDGGA--SECMSAIAGSYGYIAPEYAYT--LRVDEK 870 (995)
Q Consensus 797 ~l~~LH~~~~~~iiHrDlkp~Nill~~~~--~vkl~DfGla~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~--~~~~~~ 870 (995)
||+|||+.+ |+||||||+||+++.++ .+||+|||+++.+..... ........||+.|+|||++.+ ..++.+
T Consensus 180 ~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 256 (345)
T 3hko_A 180 ALHYLHNQG---ICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPK 256 (345)
T ss_dssp HHHHHHHTT---EECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTH
T ss_pred HHHHHHHCC---ccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcH
Confidence 999999887 99999999999998776 899999999987643221 112345679999999999875 678999
Q ss_pred cchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCC
Q 001922 871 SDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPR 950 (995)
Q Consensus 871 ~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt 950 (995)
+||||||+++|||++|+.||........... ....... ...+ .....+..+.+++.+||+.||++||+
T Consensus 257 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~----~~~~~~~----~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps 324 (345)
T 3hko_A 257 CDAWSAGVLLHLLLMGAVPFPGVNDADTISQ----VLNKKLC----FENP----NYNVLSPLARDLLSNLLNRNVDERFD 324 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH----HHHCCCC----TTSG----GGGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCChHHHHHH----HHhcccc----cCCc----ccccCCHHHHHHHHHHcCCChhHCCC
Confidence 9999999999999999999965432222211 1111000 0000 11124567889999999999999999
Q ss_pred HHHHHHH
Q 001922 951 MREVVQM 957 (995)
Q Consensus 951 ~~evl~~ 957 (995)
+.|+++.
T Consensus 325 ~~~~l~h 331 (345)
T 3hko_A 325 AMRALQH 331 (345)
T ss_dssp HHHHHHS
T ss_pred HHHHhcC
Confidence 9999873
No 151
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.7e-38 Score=349.16 Aligned_cols=255 Identities=22% Similarity=0.267 Sum_probs=207.5
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCC-----hhHHHHHHHHHHhccCCCCceeEeEEEecCC
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHS-----HDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE 756 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 756 (995)
.+.+.|+..+.||+|+||.||+|+.. +|+.||+|++....... ..+.+.+|+.++++++||||+++++++.+.+
T Consensus 9 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (321)
T 2a2a_A 9 KVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT 88 (321)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC
Confidence 35678999999999999999999874 68999999985433221 3567999999999999999999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----CeEEeee
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF----EAHVADF 832 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~----~vkl~Df 832 (995)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++ .+||+||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~---ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 89 DVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEEEECCCCSCBHHHHHHT--CSCEEHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999999964 456899999999999999999999887 99999999999999888 7999999
Q ss_pred ccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
|+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+......
T Consensus 164 g~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~ 236 (321)
T 2a2a_A 164 GLAHEIEDGV---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK----QETLANITSVSYD 236 (321)
T ss_dssp TTCEECCTTC---CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH----HHHHHHHHTTCCC
T ss_pred ccceecCccc---cccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHhcccc
Confidence 9998764432 22345799999999999999999999999999999999999999964321 1222222111100
Q ss_pred hhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 913 EFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 913 ~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
. ++ ......+..+.+++.+||+.||++|||++|++++
T Consensus 237 ~-----~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~h 273 (321)
T 2a2a_A 237 F-----DE---EFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273 (321)
T ss_dssp C-----CH---HHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHHS
T ss_pred c-----Ch---hhhcccCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 00 0011234568899999999999999999999874
No 152
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.6e-39 Score=361.56 Aligned_cols=269 Identities=17% Similarity=0.195 Sum_probs=204.7
Q ss_pred HhhccCCCeeeccCceEEEEEEeCC------CcEEEEEEecCCCCCC----------hhHHHHHHHHHHhccCCCCceeE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPN------GVEIAVKKLLGFGTHS----------HDHGFRAEIQTLGNIRHRNIVRL 748 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~------~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~hpniv~~ 748 (995)
.+.|+..+.||+|+||+||+|++.. ++.||||++....... ....+..|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 3478999999999999999998754 4789999985432110 01123345566777789999999
Q ss_pred eEEEecC----CcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC--
Q 001922 749 LAFCSNK----ETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-- 822 (995)
Q Consensus 749 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-- 822 (995)
++++... ...|+||||+ +++|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||+++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~-~~~~l~~~~~~~i~~qi~~~l~~lH~~~---iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA-NAKRFSRKTVLQLSLRILDILEYIHEHE---YVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEESS
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eEEecCCHHHEEEecC
Confidence 9998664 4579999999 9999999974 3467999999999999999999999887 99999999999999
Q ss_pred CCCCeEEeeeccccccccCCCCc-----cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 001922 823 SAFEAHVADFGLAKFLIDGGASE-----CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV 897 (995)
Q Consensus 823 ~~~~vkl~DfGla~~~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~ 897 (995)
.++.+||+|||+++.+....... ......||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~ 268 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDP 268 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCH
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCH
Confidence 88999999999998764332211 1133459999999999999999999999999999999999999997643333
Q ss_pred hHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 898 DIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
........... ......+++.+. ....+..+.+++..||+.+|++||+++++++.|+++.+
T Consensus 269 ~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~ 329 (364)
T 3op5_A 269 KYVRDSKIRYR---ENIASLMDKCFP--AANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLK 329 (364)
T ss_dssp HHHHHHHHHHH---HCHHHHHHHHSC--TTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhh---hhHHHHHHHhcc--cccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHH
Confidence 33322222111 122222222221 12235678999999999999999999999999888654
No 153
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=8e-39 Score=355.65 Aligned_cols=271 Identities=20% Similarity=0.255 Sum_probs=200.7
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+..+.||+|+||+||+|+.. +++.||+|++...........+.+|++++++++||||+++++++.+.+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999875 68999999985433333333456799999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGAS 844 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~ 844 (995)
++ |+|.+++... +..+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++..... .
T Consensus 82 ~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~--~ 154 (324)
T 3mtl_A 82 LD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIP--T 154 (324)
T ss_dssp CS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred cc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCcCHHHEEECCCCCEEEccCcccccccCC--c
Confidence 97 5999988743 456899999999999999999999887 999999999999999999999999999865322 1
Q ss_pred ccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC----
Q 001922 845 ECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD---- 919 (995)
Q Consensus 845 ~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---- 919 (995)
.......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.......................+....+
T Consensus 155 ~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 234 (324)
T 3mtl_A 155 KTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEF 234 (324)
T ss_dssp --------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHH
T ss_pred cccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhh
Confidence 22344578999999999876 5689999999999999999999999976433332322222222211111111110
Q ss_pred -----CcCCC-----CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCCC
Q 001922 920 -----PRLSM-----VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFPR 963 (995)
Q Consensus 920 -----~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~~ 963 (995)
+.... .....+..+.+++.+|++.||++|||++|+++. +.++..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 290 (324)
T 3mtl_A 235 KTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290 (324)
T ss_dssp HHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCS
T ss_pred cccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccc
Confidence 00000 011234578899999999999999999999873 555443
No 154
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=7e-39 Score=350.28 Aligned_cols=252 Identities=20% Similarity=0.327 Sum_probs=202.0
Q ss_pred hhccCCCeeeccCceEEEEEEeCC-C-------cEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPN-G-------VEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET 757 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 757 (995)
++|+..+.||+|+||+||+|+... + ..||+|++... .....+.+.+|+.++++++||||+++++++.+++.
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA-HRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG-GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc-cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 578888999999999999997543 3 47999998432 33445679999999999999999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC--------eEE
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE--------AHV 829 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~--------vkl 829 (995)
.++||||+++|+|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++. +||
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~kl 162 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGNPPFIKL 162 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEEECCBGGGTBCCEEEE
T ss_pred CEEEEECCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHhhCC---eECCCcCcceEEEecCCcccccccceeee
Confidence 99999999999999999743 345899999999999999999999887 999999999999998887 999
Q ss_pred eeeccccccccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhc
Q 001922 830 ADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATN 908 (995)
Q Consensus 830 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 908 (995)
+|||++..... .....+|+.|+|||++.+ ..++.++||||+|+++|||++|..|+....+........ ..
T Consensus 163 ~Dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~---~~ 233 (289)
T 4fvq_A 163 SDPGISITVLP------KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFY---ED 233 (289)
T ss_dssp CCCCSCTTTSC------HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH---HT
T ss_pred ccCcccccccC------ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHh---hc
Confidence 99999875422 133468899999999987 678999999999999999999655543322221111111 11
Q ss_pred CChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 909 GRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 909 ~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
. . ..+...+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 234 ~----------~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p 276 (289)
T 4fvq_A 234 R----------H---QLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTP 276 (289)
T ss_dssp T----------C---CCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC--
T ss_pred c----------C---CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCC
Confidence 0 0 01112244688999999999999999999999999998763
No 155
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=348.83 Aligned_cols=268 Identities=26% Similarity=0.360 Sum_probs=204.4
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc--CCCCceeEeEEEecC----
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI--RHRNIVRLLAFCSNK---- 755 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l--~hpniv~~~~~~~~~---- 755 (995)
..+.++|+..+.||+|+||.||+|+.. ++.||||++.. .....+..|.+++... +||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFT----TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEec----cccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 345678999999999999999999884 89999999842 2234455566666555 899999999998776
Q ss_pred CcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCEEECCCCCeEEe
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC-----SPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-----~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
...++||||+++|+|.+++... .+++..++.++.|++.||+|||+.+ .++|+||||||+||+++.++.+||+
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~ 184 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA 184 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC
T ss_pred CceEEEEeccCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE
Confidence 6789999999999999999643 5899999999999999999999760 1139999999999999999999999
Q ss_pred eeccccccccCCCCc--cccccccCcccccccccccCCCCcc------cchhhHHHHHHHHHhC----------CCCCCC
Q 001922 831 DFGLAKFLIDGGASE--CMSAIAGSYGYIAPEYAYTLRVDEK------SDVYSFGVVLLELLTG----------RRPVGD 892 (995)
Q Consensus 831 DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~------~DvwSlGvil~elltg----------~~Pf~~ 892 (995)
|||+++.+....... ......||+.|+|||++.+..++.+ +|||||||++|||++| +.||..
T Consensus 185 Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~ 264 (337)
T 3mdy_A 185 DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD 264 (337)
T ss_dssp CCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred eCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence 999998664332211 1134579999999999987766654 9999999999999999 666655
Q ss_pred CCCCch-HHHHHHHHhcCChhhhhhhcCCcCC--CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 893 FGDGVD-IVQWSKRATNGRKEEFLSILDPRLS--MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 893 ~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
...... ........... ...+..+ ..+..++..+.+++.+||+.||++||+++|++++|+++.+.
T Consensus 265 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~ 332 (337)
T 3mdy_A 265 LVPSDPSYEDMREIVCIK-------KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332 (337)
T ss_dssp TSCSSCCHHHHHHHHTTS-------CCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred hcCCCCchhhhHHHHhhh-------ccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhh
Confidence 332221 11111111111 0111111 11237888999999999999999999999999999987654
No 156
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-38 Score=343.08 Aligned_cols=253 Identities=25% Similarity=0.343 Sum_probs=200.8
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.++|+..+.||+|+||+||+|+. .++..||+|++.........+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 20 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 99 (285)
T 3is5_A 20 IDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM 99 (285)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence 457899999999999999999976 4688999999866555556788999999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeeccccc
Q 001922 763 EYMRNGSLGEALHGK--KGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKF 837 (995)
Q Consensus 763 e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~ 837 (995)
||+++|+|.+++... .+..+++..++.++.|++.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.
T Consensus 100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~ 176 (285)
T 3is5_A 100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAEL 176 (285)
T ss_dssp CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEESSSSTTCCEEECCCCCCCC
T ss_pred EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCCCHHHEEEecCCCCCCEEEEeeeccee
Confidence 999999999988532 2456899999999999999999999887 9999999999999 4567899999999986
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
+... .......||+.|+|||++. ..++.++||||+|+++|||++|+.||.... ...........
T Consensus 177 ~~~~---~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~----~~~~~~~~~~~-------- 240 (285)
T 3is5_A 177 FKSD---EHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS----LEEVQQKATYK-------- 240 (285)
T ss_dssp -------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC--------
T ss_pred cCCc---ccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC----HHHHHhhhccC--------
Confidence 5432 2224567999999999875 568999999999999999999999996532 11111111111
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.+.........+..+.+++.+||+.||++||+++|+++
T Consensus 241 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 241 -EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp -CCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred -CcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11111111113456889999999999999999999986
No 157
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2e-38 Score=354.92 Aligned_cols=250 Identities=23% Similarity=0.242 Sum_probs=204.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||+||+|+.+ +++.||+|++.... .....+.+..|..++..+ +||+|+++++++.+.+..|+
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 357888999999999999999875 47889999985321 123356688899999988 79999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||++||+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 99 v~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 9999999999999963 346899999999999999999999887 99999999999999999999999999986432
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+...
T Consensus 174 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~----~~~~~~~i~~~----------- 236 (353)
T 2i0e_A 174 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGED----EDELFQSIMEH----------- 236 (353)
T ss_dssp TT--CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC-----------
T ss_pred CC--cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCC----HHHHHHHHHhC-----------
Confidence 21 22345689999999999999999999999999999999999999996432 22222222211
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCC-----HHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPR-----MREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-----~~evl~~ 957 (995)
.. ..+...+..+.+++.+||+.||++||+ ++|++++
T Consensus 237 ~~-~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h 277 (353)
T 2i0e_A 237 NV-AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 277 (353)
T ss_dssp CC-CCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTS
T ss_pred CC-CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 11 123345667899999999999999995 5777654
No 158
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=357.79 Aligned_cols=251 Identities=22% Similarity=0.286 Sum_probs=196.5
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCC--CCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRH--RNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h--pniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||.||+|...+++.||||++..... ....+.+.+|+.++++++| |||+++++++.+++..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 46888999999999999999988899999999854322 2234678899999999976 99999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
|+ .+++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.+....
T Consensus 89 e~-~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 89 EC-GNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp CC-CSEEHHHHHHH--SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred eC-CCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 95 57899999964 356889999999999999999999887 99999999999997 6789999999998765443
Q ss_pred CCccccccccCccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 843 ASECMSAIAGSYGYIAPEYAYT-----------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
.........||+.|+|||++.+ ..++.++||||+||++|||++|+.||....+. .....
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~--~~~~~-------- 231 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH-------- 231 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSH--HHHHH--------
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhH--HHHHH--------
Confidence 3333345679999999999864 67889999999999999999999999653321 11111
Q ss_pred hhhhhhcCCcC-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 912 EEFLSILDPRL-SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 912 ~~~~~~~d~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+++.. ...+...+..+.+++.+||+.||++|||++|+++.
T Consensus 232 ----~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 232 ----AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp ----HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 1111111 11222334578899999999999999999999865
No 159
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=7.8e-39 Score=353.76 Aligned_cols=262 Identities=25% Similarity=0.327 Sum_probs=196.6
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCC--hhHHHHHHHHHHhccCCCCceeEeEEEecCCcc---
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHS--HDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN--- 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~--- 758 (995)
.++|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46789999999999999999986 578999999996533222 235688999999999999999999998765544
Q ss_pred -eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 759 -LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 759 -~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
|+||||+++++|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~ 165 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHT--EGPMTPKRAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARA 165 (311)
T ss_dssp EEEEEECCCEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEETTSCEEECCCSCC--
T ss_pred cEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCcCCCCHHHEEEcCCCCEEEeeccCccc
Confidence 999999999999999964 346899999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 838 LIDGGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 838 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
+...... .......||+.|+|||++.+..++.++||||+|+++|||++|+.||...... ...............
T Consensus 166 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~----~~~~~~~~~~~~~~~- 240 (311)
T 3ork_A 166 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPV----SVAYQHVREDPIPPS- 240 (311)
T ss_dssp ----------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHH----HHHHHHHHCCCCCHH-
T ss_pred ccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCCCCCcc-
Confidence 6443221 2223456899999999999999999999999999999999999999653221 111111111000000
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHH-HHHHHccCCC
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMRE-VVQMLSEFPR 963 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e-vl~~L~~~~~ 963 (995)
......+..+.+++.+||+.||++||++.+ +.+.+.++..
T Consensus 241 -------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~ 281 (311)
T 3ork_A 241 -------ARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN 281 (311)
T ss_dssp -------HHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred -------cccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence 001124567889999999999999997555 4455555443
No 160
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=368.54 Aligned_cols=321 Identities=22% Similarity=0.163 Sum_probs=204.0
Q ss_pred cEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCC
Q 001922 238 VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMN 317 (995)
Q Consensus 238 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 317 (995)
+.++.++++++ .+|..+. +.++.|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n 90 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSN 90 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCC
Confidence 35566666665 4444432 45666677777766666666777777777777777777666777777777777777777
Q ss_pred cCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCc
Q 001922 318 RLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPE 397 (995)
Q Consensus 318 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 397 (995)
++++..+..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+++..|..|..+++|+.|++++|.+.+..+.
T Consensus 91 ~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 170 (477)
T 2id5_A 91 RLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTE 170 (477)
T ss_dssp CCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHH
T ss_pred cCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChh
Confidence 77755555667777777777777777766677777777777777777777766666777777777777777777666666
Q ss_pred ccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCC
Q 001922 398 RLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNF 477 (995)
Q Consensus 398 ~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l 477 (995)
.+..+++|+.|++++|.+.+..+..|..+++|+.+++++|.+.+.+|..... ..+|++|+|++|++++..+..+.++
T Consensus 171 ~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~---~~~L~~L~l~~n~l~~~~~~~~~~l 247 (477)
T 2id5_A 171 ALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLY---GLNLTSLSITHCNLTAVPYLAVRHL 247 (477)
T ss_dssp HHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTT---TCCCSEEEEESSCCCSCCHHHHTTC
T ss_pred HhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCccccc---CccccEEECcCCcccccCHHHhcCc
Confidence 6777777777777777777766666666666666555555554444432211 2256666666666664333455566
Q ss_pred CCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEec
Q 001922 478 SSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNL 557 (995)
Q Consensus 478 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L 557 (995)
++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|..+++|++|+|++|++++..+..|..+++|+.|+|
T Consensus 248 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 327 (477)
T 2id5_A 248 VYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLIL 327 (477)
T ss_dssp TTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEEC
T ss_pred cccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEc
Confidence 66666666666666555555555566666666666665555555555556666666666555444444555555555555
Q ss_pred ccccccc
Q 001922 558 SRNHLNQ 564 (995)
Q Consensus 558 ~~N~l~~ 564 (995)
++|++..
T Consensus 328 ~~N~l~c 334 (477)
T 2id5_A 328 DSNPLAC 334 (477)
T ss_dssp CSSCEEC
T ss_pred cCCCccC
Confidence 5555543
No 161
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-37 Score=361.28 Aligned_cols=210 Identities=30% Similarity=0.428 Sum_probs=98.4
Q ss_pred ceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccc
Q 001922 69 RVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNN 148 (995)
Q Consensus 69 ~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n 148 (995)
+++.|++.++++.. +| .+..+++|++|+|++|.+++...+.++++|++|+|++|.+++..+ +..+++|++|++++|
T Consensus 47 ~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n 122 (466)
T 1o6v_A 47 QVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNN 122 (466)
T ss_dssp TCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred cccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchhhhccccCCEEECCCCccccChh--hcCCCCCCEEECCCC
Confidence 44455555554442 33 244555555555555555544445555555555555555554443 555555555555555
Q ss_pred cccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCC
Q 001922 149 NFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIP 228 (995)
Q Consensus 149 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p 228 (995)
.++++.+ +..+++|++|++++|.+++ ++ .++.+++|++|+++ |.+.+..+ ++++++|++|++++|.+.. +
T Consensus 123 ~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~~--~- 192 (466)
T 1o6v_A 123 QITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVSD--I- 192 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCCC--C-
T ss_pred CCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCCC--C-
Confidence 5555322 5555555555555555542 22 25555555555554 33332221 5555555555555444322 1
Q ss_pred cccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCc
Q 001922 229 REVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALT 296 (995)
Q Consensus 229 ~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~ 296 (995)
..+..+++|++|++++|.+++..| ++.+++|+.|++++|++++. ..+..+++|++|++++|.++
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~ 256 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQIS 256 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCC
T ss_pred hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccc
Confidence 224444555555555555543322 33344444444444444321 12333334444444444433
No 162
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=4e-38 Score=359.59 Aligned_cols=253 Identities=23% Similarity=0.258 Sum_probs=192.1
Q ss_pred HhhccCC-CeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhc-cCCCCceeEeEEEec----CCc
Q 001922 685 LECVKDG-NVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGN-IRHRNIVRLLAFCSN----KET 757 (995)
Q Consensus 685 ~~~~~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~hpniv~~~~~~~~----~~~ 757 (995)
.+.|... ++||+|+||+||+|+.. +++.||||++.. ...+.+|+.++.+ .+||||+++++++.. ...
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~ 133 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 133 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc------chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcE
Confidence 4456655 68999999999999764 688999999842 3457788888754 489999999998865 567
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCCeEEeeecc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS---AFEAHVADFGL 834 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~---~~~vkl~DfGl 834 (995)
.|+||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~~~kl~DFG~ 210 (400)
T 1nxk_A 134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFGF 210 (400)
T ss_dssp EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCcceEEEecCCCCccEEEEeccc
Confidence 899999999999999998655567999999999999999999999887 999999999999998 78899999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
++..... ......+||+.|+|||++.+..++.++|||||||++|||++|+.||...............+..+...
T Consensus 211 a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~-- 285 (400)
T 1nxk_A 211 AKETTSH---NSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYE-- 285 (400)
T ss_dssp CEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCC--
T ss_pred ccccCCC---CccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCccc--
Confidence 9865322 22345678999999999999999999999999999999999999997643221100011111111000
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.-.+ .....+..+.+++.+||+.||++|||++|++++
T Consensus 286 --~~~~----~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 286 --FPNP----EWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp --CCTT----TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred --CCCc----ccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0001 112345678999999999999999999999975
No 163
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=2.4e-38 Score=352.62 Aligned_cols=263 Identities=24% Similarity=0.395 Sum_probs=209.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEE--EEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEI--AVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~v--avK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 761 (995)
++|+..+.||+|+||.||+|+.. ++..+ |+|++.........+.+.+|+++++++ +||||+++++++.+.+..|+|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888999999999999999764 55544 999886554555567789999999999 899999999999999999999
Q ss_pred EEeccCCChhhhhcCCC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCe
Q 001922 762 YEYMRNGSLGEALHGKK--------------GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEA 827 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~v 827 (995)
|||+++|+|.+++.... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCccceEEEcCCCeE
Confidence 99999999999997532 347899999999999999999999887 9999999999999999999
Q ss_pred EEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHH
Q 001922 828 HVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 828 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~ 906 (995)
||+|||+++..... .......+++.|+|||++.+..++.++||||+|+++|||++ |+.||.... .......+
T Consensus 182 kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~----~~~~~~~~ 254 (327)
T 1fvr_A 182 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT----CAELYEKL 254 (327)
T ss_dssp EECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC----HHHHHHHG
T ss_pred EEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCc----HHHHHHHh
Confidence 99999998753221 12233457889999999988889999999999999999998 999996532 22222222
Q ss_pred hcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcccc
Q 001922 907 TNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSDFN 969 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~~~ 969 (995)
... .....+...+..+.+++.+||+.||++||+++|+++.|+++......+.
T Consensus 255 ~~~-----------~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 306 (327)
T 1fvr_A 255 PQG-----------YRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERKTYV 306 (327)
T ss_dssp GGT-----------CCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSSCSB
T ss_pred hcC-----------CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhcCcc
Confidence 211 1111233455679999999999999999999999999998876554443
No 164
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=347.85 Aligned_cols=266 Identities=23% Similarity=0.272 Sum_probs=200.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||+||+|+.. +|+.||+|++...... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 467889999999999999999874 5899999998543322 22456788999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 82 e~~~~~~l~~~~~~--~~~~~~~~~~~i~~~l~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 156 (311)
T 4agu_A 82 EYCDHTVLHELDRY--QRGVPEHLVKSITWQTLQAVNFCHKHN---CIHRDVKPENILITKHSVIKLCDFGFARLLTGPS 156 (311)
T ss_dssp ECCSEEHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECC---
T ss_pred EeCCCchHHHHHhh--hcCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc
Confidence 99999999998853 356899999999999999999999887 9999999999999999999999999998764322
Q ss_pred CCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh------
Q 001922 843 ASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL------ 915 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~------ 915 (995)
.......||+.|+|||++.+ ..++.++||||+|+++|+|++|+.||.........................
T Consensus 157 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (311)
T 4agu_A 157 --DYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQ 234 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCG
T ss_pred --cccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccccccc
Confidence 22245578999999999876 568999999999999999999999997644332222222221111000000
Q ss_pred -----hhcCCcCCC----CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 -----SILDPRLSM----VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 -----~~~d~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...++.... ..+..+..+.+++.+||+.||++|||++|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 235 YFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred ccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000000000 001345568899999999999999999999864
No 165
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=356.00 Aligned_cols=267 Identities=16% Similarity=0.165 Sum_probs=202.2
Q ss_pred hhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCCCC----------hhHHHHHHHHHHhccCCCCceeEeEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGTHS----------HDHGFRAEIQTLGNIRHRNIVRLLAF 751 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~hpniv~~~~~ 751 (995)
++|+..+.||+|+||+||+|+.. ++..||+|++....... ....+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999875 57889999985432211 11235678888999999999999999
Q ss_pred Eec----CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC--
Q 001922 752 CSN----KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF-- 825 (995)
Q Consensus 752 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~-- 825 (995)
+.. ....|+||||+ +++|.+++... ..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~ 190 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENE---YVHGDIKAANLLLGYKNPD 190 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEESSSTT
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCcCHHHEEEccCCCC
Confidence 877 67889999999 99999999643 37899999999999999999999887 99999999999999887
Q ss_pred CeEEeeeccccccccCCCC-----ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC-chH
Q 001922 826 EAHVADFGLAKFLIDGGAS-----ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDG-VDI 899 (995)
Q Consensus 826 ~vkl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~-~~~ 899 (995)
.+||+|||+++.+...... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...
T Consensus 191 ~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~ 270 (345)
T 2v62_A 191 QVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAV 270 (345)
T ss_dssp SEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHH
T ss_pred cEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHH
Confidence 9999999999876432211 1124457999999999999999999999999999999999999999643222 222
Q ss_pred HHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 900 VQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 900 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
.................... ....+..+.+++.+||+.||++||++++|++.|+++...
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~ 329 (345)
T 2v62_A 271 QTAKTNLLDELPQSVLKWAP------SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGIP 329 (345)
T ss_dssp HHHHHHHHHTTTHHHHHHSC------TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCCC
T ss_pred HHHHHhhcccccHHHHhhcc------ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCCc
Confidence 22222222211111111110 113455799999999999999999999999999987653
No 166
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=356.10 Aligned_cols=247 Identities=21% Similarity=0.261 Sum_probs=195.4
Q ss_pred CCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEeccCC
Q 001922 690 DGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNG 768 (995)
Q Consensus 690 ~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~g 768 (995)
..+.||+|+||.||+|+. .+|+.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 93 ~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTR-GMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEECC-----CEEEEEETTTCCEEEEEEEECC-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred cceEEecCcCEEEEEEEEcCCCcEEEEEEEccc-ccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 356899999999999976 46899999998542 2234567899999999999999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE--CCCCCeEEeeeccccccccCCCCcc
Q 001922 769 SLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL--NSAFEAHVADFGLAKFLIDGGASEC 846 (995)
Q Consensus 769 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill--~~~~~vkl~DfGla~~~~~~~~~~~ 846 (995)
+|.+++.. ....+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+||+|||+++.+.... .
T Consensus 172 ~L~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~---~ 244 (373)
T 2x4f_A 172 ELFDRIID-ESYNLTELDTILFMKQICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE---K 244 (373)
T ss_dssp EEHHHHHH-TGGGCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC---B
T ss_pred cHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc---c
Confidence 99998864 3356899999999999999999999887 9999999999999 667899999999998764332 2
Q ss_pred ccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCC
Q 001922 847 MSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVP 926 (995)
Q Consensus 847 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 926 (995)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....+.... ..+...... .... ..
T Consensus 245 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----~~i~~~~~~----~~~~----~~ 312 (373)
T 2x4f_A 245 LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL----NNILACRWD----LEDE----EF 312 (373)
T ss_dssp CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH----HHHHHTCCC----SCSG----GG
T ss_pred cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHH----HHHHhccCC----CChh----hh
Confidence 23457999999999999989999999999999999999999999653322111 111111000 0000 11
Q ss_pred HHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 927 KEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 927 ~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
...+..+.+++.+||+.||++||+++|+++
T Consensus 313 ~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 313 QDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp TTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 224567899999999999999999999997
No 167
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.8e-38 Score=342.84 Aligned_cols=246 Identities=25% Similarity=0.332 Sum_probs=181.6
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||.||+|+. .+++.||+|++.... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5689999999999999999976 468999999985432 2233567889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+ ++++.+++.. ...+++..++.++.|++.|+.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 93 e~~-~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 166 (275)
T 2eue_A 93 EYA-GNELFDYIVQ--RDKMSEQEARRFFQQIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp ECC-CEEHHHHHHT--SSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCSSCC-------
T ss_pred hhc-CCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeeccCChHhEEECCCCCEEEeecccceeccCcc
Confidence 999 6788888853 356899999999999999999999887 9999999999999999999999999998654332
Q ss_pred CCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......||+.|+|||++.+..+ +.++||||+|+++|||++|+.||.... ...........
T Consensus 167 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~------------ 227 (275)
T 2eue_A 167 ---FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDES----IPVLFKNISNG------------ 227 (275)
T ss_dssp -----------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHT------------
T ss_pred ---cccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCC----HHHHHHHHHhC------------
Confidence 2234579999999999988765 789999999999999999999996532 12222222111
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
....+...+..+.+++.+||+.||++|||++|+++
T Consensus 228 ~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 228 VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 11123335567889999999999999999999975
No 168
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=9.1e-39 Score=364.05 Aligned_cols=254 Identities=23% Similarity=0.262 Sum_probs=202.9
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..++||+|+||+||+|+.+ +++.||+|++.+.. .......+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV 147 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEE
Confidence 457888999999999999999875 58899999984311 112234578899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||++||+|.+++.. ..+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 148 ~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~ 221 (410)
T 3v8s_A 148 MEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 221 (410)
T ss_dssp ECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeeECCCCCEEEeccceeEeeccC
Confidence 999999999999964 35889999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCccccccccCcccccccccccCC----CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLR----VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~----~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
.. ......+||+.|+|||++.+.. ++.++||||+||++|||++|+.||.... .......+..... ..
T Consensus 222 ~~-~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~----~~~~~~~i~~~~~----~~ 292 (410)
T 3v8s_A 222 GM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADS----LVGTYSKIMNHKN----SL 292 (410)
T ss_dssp SE-EECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHHHTHHH----HC
T ss_pred Cc-ccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCC----hhhHHHHHHhccc----cc
Confidence 21 1234568999999999987665 7899999999999999999999996432 1222222211100 00
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCC--CCCHHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIE--RPRMREVVQM 957 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPt~~evl~~ 957 (995)
.-+. ....+..+.+++.+|++.+|.+ ||+++|++++
T Consensus 293 ~~p~----~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 293 TFPD----DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp CCCT----TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred cCCC----cccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0011 1124567889999999999999 9999999975
No 169
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.3e-38 Score=360.59 Aligned_cols=251 Identities=22% Similarity=0.284 Sum_probs=197.1
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccC--CCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIR--HRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv~ 762 (995)
..|+..+.||+|+||+||+|...+++.||||++.... .....+.+.+|+.++++++ ||||+++++++...+..|+||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 3588899999999999999998889999999985432 2234567899999999996 599999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
| +.+++|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+||+++ ++.+||+|||+++.+....
T Consensus 136 E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp E-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTT---CCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred e-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 9 5678999999743 46888899999999999999999777 99999999999996 5899999999998765443
Q ss_pred CCccccccccCccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 843 ASECMSAIAGSYGYIAPEYAYT-----------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
........+||+.|+|||++.+ ..++.++|||||||++|||++|+.||....+... ...
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~---~~~------- 278 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQIS---KLH------- 278 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH---HHH-------
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHH---HHH-------
Confidence 3333345689999999999865 4688999999999999999999999965332111 111
Q ss_pred hhhhhhcCCcCC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 912 EEFLSILDPRLS-MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 912 ~~~~~~~d~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.++++... ..+...+..+.+++.+||+.||++||+++|+++.
T Consensus 279 ----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 279 ----AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp ----HHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ----HHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11121111 1122234578899999999999999999999864
No 170
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=2.7e-38 Score=351.19 Aligned_cols=245 Identities=22% Similarity=0.297 Sum_probs=181.3
Q ss_pred CCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEecCCcceEEEEeccCC
Q 001922 691 GNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKETNLLVYEYMRNG 768 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~g 768 (995)
++.||+|+||+||+|+.. +++.||||++.. .....+.+|+.+++++. ||||+++++++.++...|+||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISK----RMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEG----GGHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEECh----hhhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999774 689999999843 23566889999999997 999999999999999999999999999
Q ss_pred ChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---CeEEeeeccccccccCCCCc
Q 001922 769 SLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF---EAHVADFGLAKFLIDGGASE 845 (995)
Q Consensus 769 sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~---~vkl~DfGla~~~~~~~~~~ 845 (995)
+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++...... .
T Consensus 92 ~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~--~ 164 (325)
T 3kn6_A 92 ELFERIKK--KKHFSETEASYIMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN--Q 164 (325)
T ss_dssp BHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEEEC----CEEEECCCTTCEECCC-----
T ss_pred cHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCHHHEEEecCCCcccEEEeccccceecCCCC--C
Confidence 99999964 356899999999999999999999887 99999999999997765 79999999998654322 2
Q ss_pred cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC---chHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 846 CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDG---VDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 846 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~---~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||...... ....+....+..+ ..
T Consensus 165 ~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~-----------~~ 233 (325)
T 3kn6_A 165 PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKG-----------DF 233 (325)
T ss_dssp -------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTT-----------CC
T ss_pred cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcC-----------CC
Confidence 234567899999999999999999999999999999999999999753321 1122222222221 11
Q ss_pred CCCC---HHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 923 SMVP---KEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 923 ~~~~---~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.... ...+..+.+++.+||+.||++||+++|+++.
T Consensus 234 ~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 234 SFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp CCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred CCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 1111 2346678999999999999999999998753
No 171
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=363.17 Aligned_cols=256 Identities=23% Similarity=0.202 Sum_probs=202.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||+||+|+.+ +|+.||+|++.+.. .......+.+|..++..++||||+++++++.+.+..|+|
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV 139 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLV 139 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEE
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 457889999999999999999874 68999999984311 112234478899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++... +..+++..++.++.||+.||+|||+.+ |+||||||+||+++.++.+||+|||+++.+...
T Consensus 140 mE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~g---iiHrDLKp~NILld~~g~vkL~DFGla~~~~~~ 215 (412)
T 2vd5_A 140 MEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLG---YVHRDIKPDNILLDRCGHIRLADFGSCLKLRAD 215 (412)
T ss_dssp ECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccCHHHeeecCCCCEEEeechhheeccCC
Confidence 9999999999999642 346899999999999999999999887 999999999999999999999999999876433
Q ss_pred CCCccccccccCcccccccccc-------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 842 GASECMSAIAGSYGYIAPEYAY-------TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~-------~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
.. ......+||+.|+|||++. ...++.++||||+||++|||++|+.||..... ......+.....
T Consensus 216 ~~-~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~----~~~~~~i~~~~~--- 287 (412)
T 2vd5_A 216 GT-VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADST----AETYGKIVHYKE--- 287 (412)
T ss_dssp SC-EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTHHH---
T ss_pred Cc-cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCH----HHHHHHHHhccc---
Confidence 22 1223468999999999987 35689999999999999999999999965322 111111111100
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCC---CCHHHHHHH
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIER---PRMREVVQM 957 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~R---Pt~~evl~~ 957 (995)
. ...+..+...+..+.++|.+||. +|++| |+++|++++
T Consensus 288 --~--~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 288 --H--LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp --H--CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred --C--cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 0 01111123355678999999999 99998 689999865
No 172
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=6e-38 Score=340.61 Aligned_cols=248 Identities=23% Similarity=0.300 Sum_probs=204.3
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
++.++|+..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF-VEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLV 84 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc-cchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEE
Confidence 45778999999999999999999764 57789999985432 23467799999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeecccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKFL 838 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~~ 838 (995)
|||+++++|.+++.. ...+++..++.++.|++.|+.|||+++ |+||||||+||++ +.++.+||+|||++..+
T Consensus 85 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~ 159 (277)
T 3f3z_A 85 MELCTGGELFERVVH--KRVFRESDAARIMKDVLSAVAYCHKLN---VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARF 159 (277)
T ss_dssp EECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EeccCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEecCCCCCcEEEEecccceec
Confidence 999999999999864 345899999999999999999999887 9999999999999 78899999999999876
Q ss_pred ccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 839 IDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... ......||+.|+|||++.+. ++.++||||+|+++|||++|+.||....+.. ....+....
T Consensus 160 ~~~~---~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~-------- 223 (277)
T 3f3z_A 160 KPGK---MMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSE----VMLKIREGT-------- 223 (277)
T ss_dssp CTTS---CBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH----HHHHHHHCC--------
T ss_pred cCcc---chhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHH----HHHHHHhCC--------
Confidence 4332 23456799999999988654 8999999999999999999999996533211 111111110
Q ss_pred CCcCCCCCH----HHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 919 DPRLSMVPK----EEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 919 d~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
. ..+. ..+..+.+++.+|++.||++||++.|+++
T Consensus 224 ---~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 224 ---F-TFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp ---C-CCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---C-CCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0111 23567899999999999999999999985
No 173
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=346.99 Aligned_cols=247 Identities=22% Similarity=0.241 Sum_probs=193.7
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-ChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
..++|+..++||+|+||+||+|+.. +++.||||++...... .....+..|+..+.++ +||||+++++++.+++..++
T Consensus 55 ~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l 134 (311)
T 3p1a_A 55 FQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL 134 (311)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence 3467999999999999999999875 7899999998543222 2233455566665555 89999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+ +++|.+++... +..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 135 v~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~ 209 (311)
T 3p1a_A 135 QTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGT 209 (311)
T ss_dssp EEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECGGGCEEECCCTTCEECC-
T ss_pred EEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEccceeeeeccc
Confidence 99999 67999988643 456999999999999999999999887 99999999999999999999999999987643
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
. .......||+.|+|||++.+ .++.++|||||||++|||++|..|+... . .+. ....... .+
T Consensus 210 ~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~----~--~~~-~~~~~~~-------~~ 271 (311)
T 3p1a_A 210 A---GAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGG----E--GWQ-QLRQGYL-------PP 271 (311)
T ss_dssp --------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSH----H--HHH-HHTTTCC-------CH
T ss_pred C---CCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCc----c--HHH-HHhccCC-------Cc
Confidence 2 22344579999999998876 7899999999999999999997776431 1 111 1111100 00
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
..+...+..+.+++.+||+.||++|||++|+++
T Consensus 272 ---~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 272 ---EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 011124567899999999999999999999986
No 174
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.9e-38 Score=379.72 Aligned_cols=251 Identities=25% Similarity=0.341 Sum_probs=202.6
Q ss_pred eeeccCceEEEEEEeC---CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEeccCCC
Q 001922 693 VIGRGGAGIVYHGKMP---NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRNGS 769 (995)
Q Consensus 693 ~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~gs 769 (995)
.||+|+||.||+|.+. ++..||||++.........+.+.+|++++++++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999763 4667999999665555567789999999999999999999999976 56899999999999
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC-Ccccc
Q 001922 770 LGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA-SECMS 848 (995)
Q Consensus 770 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~-~~~~~ 848 (995)
|.+++.. ....+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+..... .....
T Consensus 422 L~~~l~~-~~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~ 497 (613)
T 2ozo_A 422 LHKFLVG-KREEIPVSNVAELLHQVSMGMKYLEEKN---FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARS 497 (613)
T ss_dssp HHHHHTT-CTTTSCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCSTTTTCC----------
T ss_pred HHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeecc
Confidence 9999964 3566899999999999999999999887 99999999999999999999999999987643221 11122
Q ss_pred ccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCH
Q 001922 849 AIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPK 927 (995)
Q Consensus 849 ~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 927 (995)
...+++.|+|||++.+..++.++|||||||++|||++ |+.||...... + ....+..+ .....+.
T Consensus 498 ~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~-~---~~~~i~~~-----------~~~~~p~ 562 (613)
T 2ozo_A 498 AGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP-E---VMAFIEQG-----------KRMECPP 562 (613)
T ss_dssp ----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSH-H---HHHHHHTT-----------CCCCCCT
T ss_pred CCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHH-H---HHHHHHcC-----------CCCCCCC
Confidence 3346789999999999999999999999999999998 99999764332 1 11222211 1112344
Q ss_pred HHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 928 EEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 928 ~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.++..+.++|.+||+.||++||++++|++.|+.+..
T Consensus 563 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 598 (613)
T 2ozo_A 563 ECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY 598 (613)
T ss_dssp TCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 566789999999999999999999999999988643
No 175
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.2e-38 Score=350.71 Aligned_cols=254 Identities=22% Similarity=0.252 Sum_probs=203.2
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
++.+.|+..+.||+|+||+||+|+.+ +++.||+|++..... ...+|++++.++ +||||+++++++.+++..|+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~l 93 (342)
T 2qr7_A 19 QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYV 93 (342)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEE
T ss_pred CccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEE
Confidence 35678999999999999999999764 688999999854322 235688888888 79999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC----CCeEEeeecccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA----FEAHVADFGLAK 836 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~----~~vkl~DfGla~ 836 (995)
||||+++|+|.+++.. ...+++..+..++.||+.||.|||+++ |+||||||+||++.++ +.+||+|||+++
T Consensus 94 v~E~~~gg~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~g---ivHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~ 168 (342)
T 2qr7_A 94 VTELMKGGELLDKILR--QKFFSEREASAVLFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK 168 (342)
T ss_dssp EECCCCSCBHHHHHHT--CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSCSGGGEEECCCTTCE
T ss_pred EEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeccCCHHHEEEecCCCCcCeEEEEECCCcc
Confidence 9999999999999964 356899999999999999999999887 9999999999998543 359999999998
Q ss_pred ccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
...... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||....+ ....+....+..+...
T Consensus 169 ~~~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~~~~i~~~~~~---- 241 (342)
T 2qr7_A 169 QLRAEN--GLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPD-DTPEEILARIGSGKFS---- 241 (342)
T ss_dssp ECBCTT--CCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTT-SCHHHHHHHHHHCCCC----
T ss_pred cCcCCC--CceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCc-CCHHHHHHHHccCCcc----
Confidence 764332 223456789999999999888899999999999999999999999975332 2222233333222110
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.. .......+..+.+++.+||+.||++||+++|++++
T Consensus 242 -~~---~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~h 278 (342)
T 2qr7_A 242 -LS---GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRH 278 (342)
T ss_dssp -CC---STTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred -cC---ccccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 00 01122345678899999999999999999999864
No 176
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=5.4e-38 Score=367.92 Aligned_cols=254 Identities=25% Similarity=0.295 Sum_probs=208.5
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.|+..++||+|+||.||+|+.+ +|+.||+|++.... .......+.+|++++++++||||+++++++.+.+..|+||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 46788899999999999999874 68999999984321 1223466889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 763 EYMRNGSLGEALHGKK--GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||++||+|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~g---IvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcC---CcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 9999999999987533 456899999999999999999999887 99999999999999999999999999987644
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
... .....+||+.|+|||++.+..++.++||||+||++|||++|+.||...............+....
T Consensus 342 ~~~--~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~---------- 409 (543)
T 3c4z_A 342 GQT--KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQA---------- 409 (543)
T ss_dssp TCC--CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCC----------
T ss_pred CCc--ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcc----------
Confidence 322 22345899999999999999999999999999999999999999976544333333333322211
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRM-----REVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 956 (995)
...+...+..+.+++.+||+.||++||++ +++.+
T Consensus 410 --~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 410 --VTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp --CCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred --cCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 11234456778999999999999999965 66664
No 177
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=6.2e-38 Score=354.32 Aligned_cols=260 Identities=23% Similarity=0.217 Sum_probs=203.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-----CCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-----HRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||+||+|+. .+++.||||++.. .......+..|+.+++.++ ||||+++++++...+..
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~ 111 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN--IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHM 111 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS--CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc--chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCee
Confidence 56799999999999999999987 5688999999853 2233456788999999986 99999999999999999
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---------------
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS--------------- 823 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~--------------- 823 (995)
++||||+ +++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+||+++.
T Consensus 112 ~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~~~~~~~~~~~~ 187 (360)
T 3llt_A 112 CLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTD 187 (360)
T ss_dssp EEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred EEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCcccEEEccccccccccchhcccc
Confidence 9999999 899999998766667999999999999999999999887 999999999999976
Q ss_pred ----------CCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 001922 824 ----------AFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDF 893 (995)
Q Consensus 824 ----------~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~ 893 (995)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||...
T Consensus 188 ~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 262 (360)
T 3llt_A 188 GKKIQIYRTKSTGIKLIDFGCATFKSDY-----HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH 262 (360)
T ss_dssp CCEEEEEEESCCCEEECCCTTCEETTSC-----CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred cccccccccCCCCEEEEeccCceecCCC-----CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence 789999999999864322 23457899999999999999999999999999999999999999754
Q ss_pred CCCchHHHHHHHHhcCChhhh-hhhc--------CC-----cCCC-----------------CCHHHHHHHHHHHhcccC
Q 001922 894 GDGVDIVQWSKRATNGRKEEF-LSIL--------DP-----RLSM-----------------VPKEEAMHLLFVAMLCIQ 942 (995)
Q Consensus 894 ~~~~~~~~~~~~~~~~~~~~~-~~~~--------d~-----~~~~-----------------~~~~~~~~l~~li~~cl~ 942 (995)
......... ........... .... +. ..+. .+......+.+++.+||+
T Consensus 263 ~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 341 (360)
T 3llt_A 263 EHMEHLAMM-ESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQ 341 (360)
T ss_dssp SHHHHHHHH-HHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCC
T ss_pred cHHHHHHHH-HHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhc
Confidence 322222221 11111111110 0000 00 0000 000112567899999999
Q ss_pred CCCCCCCCHHHHHH
Q 001922 943 ENSIERPRMREVVQ 956 (995)
Q Consensus 943 ~dP~~RPt~~evl~ 956 (995)
.||++|||++|+++
T Consensus 342 ~dP~~Rpta~elL~ 355 (360)
T 3llt_A 342 IDPTLRPSPAELLK 355 (360)
T ss_dssp SSGGGSCCHHHHTT
T ss_pred CChhhCCCHHHHhc
Confidence 99999999999975
No 178
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.1e-38 Score=345.47 Aligned_cols=253 Identities=21% Similarity=0.352 Sum_probs=208.1
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec-------
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN------- 754 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------- 754 (995)
.+..+|+..+.||+|+||.||+|+.. +++.||+|++... .+.+.+|++++++++||||+++++++..
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (284)
T 2a19_B 8 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN-----NEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPET 82 (284)
T ss_dssp HHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECC-----SGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---
T ss_pred hhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEeccc-----cHHHHHHHHHHHhCCCCCEEEEeeeEeccccCccc
Confidence 45678999999999999999999875 7899999998532 2347789999999999999999998854
Q ss_pred ---------CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 001922 755 ---------KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF 825 (995)
Q Consensus 755 ---------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~ 825 (995)
....++||||+++|+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++
T Consensus 83 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 83 SSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKK---LINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETT
T ss_pred ccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHEEEcCCC
Confidence 445799999999999999997655567999999999999999999999887 99999999999999999
Q ss_pred CeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHH
Q 001922 826 EAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKR 905 (995)
Q Consensus 826 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~ 905 (995)
.+||+|||++....... ......||+.|+|||++.+..++.++||||+|+++|||++|..|+.. .......
T Consensus 160 ~~kl~Dfg~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~------~~~~~~~ 230 (284)
T 2a19_B 160 QVKIGDFGLVTSLKNDG---KRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE------TSKFFTD 230 (284)
T ss_dssp EEEECCCTTCEESSCCS---CCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHH------HHHHHHH
T ss_pred CEEECcchhheeccccc---cccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchh------HHHHHHH
Confidence 99999999998764432 22345799999999999999999999999999999999999998732 1111111
Q ss_pred HhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCc
Q 001922 906 ATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSS 966 (995)
Q Consensus 906 ~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~ 966 (995)
.. ... .+...+..+.+++.+||+.||++||+++|+++.|+.+.+...
T Consensus 231 ~~-----------~~~---~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 231 LR-----------DGI---ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HH-----------TTC---CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred hh-----------ccc---ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 11 111 122234568899999999999999999999999998876543
No 179
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=8.1e-38 Score=348.02 Aligned_cols=260 Identities=20% Similarity=0.228 Sum_probs=207.0
Q ss_pred cHHHHHhhccCC-CeeeccCceEEEEEEeC-CCcEEEEEEecCCCC-CChhHHHHHHHHHHhccC-CCCceeEeEEEecC
Q 001922 680 SVSDILECVKDG-NVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNK 755 (995)
Q Consensus 680 ~~~~~~~~~~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~ 755 (995)
..+.+.++|... +.||+|+||+||+|+.. +++.||+|++..... ......+.+|+.++++++ ||||+++++++.+.
T Consensus 22 ~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~ 101 (327)
T 3lm5_A 22 SMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENT 101 (327)
T ss_dssp CHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECS
T ss_pred HHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeC
Confidence 346677788877 89999999999999764 689999999854322 233567889999999995 69999999999999
Q ss_pred CcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCCeEEeee
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS---AFEAHVADF 832 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~---~~~vkl~Df 832 (995)
+..++||||+++|+|.+++.......+++..++.++.|++.||+|||+.+ |+||||||+||+++. ++.+||+||
T Consensus 102 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~g---ivH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 102 SEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp SEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred CeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCcCChHHEEEecCCCCCcEEEeeC
Confidence 99999999999999999997666678999999999999999999999887 999999999999998 789999999
Q ss_pred ccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
|+++...... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||......... ..+....
T Consensus 179 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~----~~i~~~~-- 249 (327)
T 3lm5_A 179 GMSRKIGHAC---ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETY----LNISQVN-- 249 (327)
T ss_dssp GGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH----HHHHHTC--
T ss_pred ccccccCCcc---ccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHH----HHHHhcc--
Confidence 9998764322 223457999999999999999999999999999999999999999653221111 1111110
Q ss_pred hhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 913 EFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 913 ~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...........+..+.+++.+||+.||++|||++|+++.
T Consensus 250 ------~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 250 ------VDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp ------CCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred ------cccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 000111222345678899999999999999999999864
No 180
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.9e-38 Score=355.11 Aligned_cols=247 Identities=26% Similarity=0.268 Sum_probs=192.7
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHH-HhccCCCCceeEeEEEecCCcceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQT-LGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
++|+..+.||+|+||+||+|+.+ +++.||+|++.+.. .......+..|..+ ++.++||||+++++++.+.+..|+|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 56888999999999999999875 58889999985432 12233456667776 5778999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 118 ~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 118 LDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999999964 346889999999999999999999887 999999999999999999999999999864322
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
. ......+||+.|+|||++.+..++.++||||+||++|||++|+.||.... .......+... .
T Consensus 193 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~----~~~~~~~i~~~-----------~ 255 (373)
T 2r5t_A 193 N--STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN----TAEMYDNILNK-----------P 255 (373)
T ss_dssp C--CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSB----HHHHHHHHHHS-----------C
T ss_pred C--CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC----HHHHHHHHHhc-----------c
Confidence 2 22345689999999999999999999999999999999999999996422 22222222211 1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVV 955 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl 955 (995)
. ..+...+..+.+++.+||+.||++||++.+.+
T Consensus 256 ~-~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 256 L-QLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp C-CCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred c-CCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 1 12233456788999999999999999985433
No 181
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=8e-38 Score=339.83 Aligned_cols=250 Identities=25% Similarity=0.368 Sum_probs=184.2
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 45788999999999999999986 578999999984321 122246788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 90 ~e~~~~~~L~~~l~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 90 LEMCHNGEMNRYLKN-RVKPFSENEARHFMHQIITGMLYLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EECCTTEEHHHHHHT-CSSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EecCCCCcHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 999999999999974 3456899999999999999999999887 999999999999999999999999999875432
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
. .......||+.|+|||.+.+..++.++||||+|+++|||++|+.||.......... . .....
T Consensus 166 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~----~-----------~~~~~ 228 (278)
T 3cok_A 166 H--EKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLN----K-----------VVLAD 228 (278)
T ss_dssp ----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC--------------------CCSSC
T ss_pred C--CcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHH----H-----------Hhhcc
Confidence 2 12234578999999999998889999999999999999999999996532211110 0 00011
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
. ..+...+..+.+++.+||+.||++||+++++++
T Consensus 229 ~-~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 229 Y-EMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp C-CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred c-CCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1 123334567889999999999999999999986
No 182
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=351.14 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=204.4
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCC-------hhHHHHHHHHHHhccCCCCceeEeEEEe
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHS-------HDHGFRAEIQTLGNIRHRNIVRLLAFCS 753 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~hpniv~~~~~~~ 753 (995)
.+..++|+..+.||+|+||+||+|+. .+++.||||++....... ....+.+|+.++++++||||+++++++.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45678899999999999999999975 568899999985433211 2345778999999999999999999999
Q ss_pred cCCcceEEEEeccCC-ChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeee
Q 001922 754 NKETNLLVYEYMRNG-SLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADF 832 (995)
Q Consensus 754 ~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~Df 832 (995)
+.+..++||||+.+| +|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 100 ~~~~~~lv~e~~~~g~~l~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 100 NQGFFQLVMEKHGSGLDLFAFIDR--HPRLDEPLASYIFRQLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp CSSEEEEEEECCTTSCBHHHHHHT--CCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTSCEEECCC
T ss_pred eCCEEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEEeccCHHHEEEcCCCcEEEeec
Confidence 999999999999776 99999964 446899999999999999999999887 999999999999999999999999
Q ss_pred ccccccccCCCCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
|+++...... ......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||.....
T Consensus 175 g~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------------- 235 (335)
T 3dls_A 175 GSAAYLERGK---LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEE---------------- 235 (335)
T ss_dssp TTCEECCTTC---CBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGG----------------
T ss_pred ccceECCCCC---ceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHH----------------
Confidence 9998764432 2234679999999999988877 7899999999999999999999964211
Q ss_pred hhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 912 EEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 912 ~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..... ...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 236 -----~~~~~-~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 236 -----TVEAA-IHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -----GTTTC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -----HHhhc-cCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 01122245678999999999999999999999985
No 183
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=4.8e-38 Score=342.72 Aligned_cols=254 Identities=22% Similarity=0.295 Sum_probs=204.8
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
+.++|+..+.||+|+||.||+|... +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+++..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 3567899999999999999999764 58999999985432 223346688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC---eEEeeecccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE---AHVADFGLAKFL 838 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~---vkl~DfGla~~~ 838 (995)
|||+++++|.+.+.. ...+++..+..++.|++.|+.|||+.+ |+||||||+||+++.++. +||+|||++...
T Consensus 84 ~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~ 158 (284)
T 3kk8_A 84 FDLVTGGELFEDIVA--REFYSEADASHCIQQILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAIEV 158 (284)
T ss_dssp ECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEESSSSTTCCEEECCCTTCEEC
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCcCCCCHHHEEEecCCCCCcEEEeeceeeEEc
Confidence 999999999998863 356899999999999999999999887 999999999999987655 999999999876
Q ss_pred ccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 839 IDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ............. ..
T Consensus 159 ~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~----~~~~~~~~~~~~~----~~ 227 (284)
T 3kk8_A 159 NDSE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ----HRLYAQIKAGAYD----YP 227 (284)
T ss_dssp CSSC---BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHTCCC----CC
T ss_pred ccCc---cccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch----hHHHHHHHhcccc----CC
Confidence 4322 22446799999999999999999999999999999999999999965322 1111111111000 00
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+ .....+..+.+++.+||+.||++||+++|+++.
T Consensus 228 ~~----~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 228 SP----EWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp TT----TTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred ch----hhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 01 112345678899999999999999999999873
No 184
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=2.3e-38 Score=344.08 Aligned_cols=252 Identities=28% Similarity=0.398 Sum_probs=199.8
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec-CCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN-KETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~~lv~e 763 (995)
.++|+..+.||+|+||+||+|+. .|+.||||++.. ....+.+.+|++++++++||||+++++++.+ .+..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKN---DATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEE-TTEEEEEEECCC---CC--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEE-cCCEEEEEEecc---hhHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 35788899999999999999987 588999999853 2345678999999999999999999998754 457899999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++++|.+++.......+++..++.++.|++.|+.|||+++ |+||||||+||+++.++.+||+|||++......
T Consensus 96 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~-- 170 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 170 (278)
T ss_dssp CCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred cCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCcceEEEeCCCcEEEeecccccccccc--
Confidence 999999999997543334789999999999999999999887 999999999999999999999999998864322
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
.....+++.|+|||++.+..++.++||||+|+++|||++ |+.||...... + ....+... ..
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~---~~~~~~~~-----------~~ 232 (278)
T 1byg_A 171 ---QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK-D---VVPRVEKG-----------YK 232 (278)
T ss_dssp --------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGG-G---HHHHHTTT-----------CC
T ss_pred ---ccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHH-H---HHHHHhcC-----------CC
Confidence 123467889999999998899999999999999999998 99999653221 1 11111111 11
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
...+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 233 ~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~ 273 (278)
T 1byg_A 233 MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273 (278)
T ss_dssp CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHh
Confidence 12334456779999999999999999999999999998754
No 185
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=6.3e-38 Score=360.55 Aligned_cols=256 Identities=22% Similarity=0.279 Sum_probs=195.4
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-------CCChhHHHHHHHHHHhccCCCCceeEeEEEe
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-------THSHDHGFRAEIQTLGNIRHRNIVRLLAFCS 753 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 753 (995)
..+.++|+..+.||+|+||+||+|.. .+++.||||++.... .......+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45678899999999999999999976 468999999985321 1112234789999999999999999999986
Q ss_pred cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---CeEEe
Q 001922 754 NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF---EAHVA 830 (995)
Q Consensus 754 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~---~vkl~ 830 (995)
. +..|+||||+++|+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+||+++.++ .+||+
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred c-CceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCCCcceEEEe
Confidence 4 457999999999999999853 456899999999999999999999887 99999999999997654 59999
Q ss_pred eeccccccccCCCCccccccccCccccccccccc---CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT---LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRAT 907 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 907 (995)
|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.................
T Consensus 285 DFG~a~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~ 361 (419)
T 3i6u_A 285 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 361 (419)
T ss_dssp CSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTC
T ss_pred ecccceecCCC---ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCC
Confidence 99999876432 22345679999999999853 5688999999999999999999999976544433332222111
Q ss_pred cCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 908 NGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 908 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..... ......+..+.+++.+||+.||++||+++|++++
T Consensus 362 ~~~~~-----------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 400 (419)
T 3i6u_A 362 YNFIP-----------EVWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 400 (419)
T ss_dssp CCCCH-----------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCCc-----------hhhcccCHHHHHHHHHHccCChhHCcCHHHHhCC
Confidence 10000 0001235678899999999999999999999874
No 186
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1.7e-38 Score=355.72 Aligned_cols=251 Identities=25% Similarity=0.327 Sum_probs=202.0
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC--ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH--SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
..+.|+..+.||+|+||+||+|+. .+++.||||++...... ...+.+.+|++++++++||||+++++++.+++..++
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 131 (348)
T 1u5q_A 52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL 131 (348)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEE
Confidence 346688889999999999999976 57899999998543222 223568899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+. |++.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++....
T Consensus 132 v~e~~~-g~l~~~l~~-~~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~ 206 (348)
T 1u5q_A 132 VMEYCL-GSASDLLEV-HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206 (348)
T ss_dssp EEECCS-EEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS
T ss_pred EEecCC-CCHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEeeccCceecCC
Confidence 999997 588888753 2356899999999999999999999887 99999999999999999999999999986532
Q ss_pred CCCCccccccccCcccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 841 GGASECMSAIAGSYGYIAPEYAY---TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
.....||+.|+|||++. ...++.++|||||||++|||++|+.||...... .....+....
T Consensus 207 ------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~----~~~~~~~~~~------- 269 (348)
T 1u5q_A 207 ------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM----SALYHIAQNE------- 269 (348)
T ss_dssp ------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSC-------
T ss_pred ------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHHhcC-------
Confidence 13457999999999874 567899999999999999999999999653221 1111111110
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHc
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLS 959 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~ 959 (995)
.+ ...+...+..+.+++.+||+.||++|||++++++...
T Consensus 270 -~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~ 308 (348)
T 1u5q_A 270 -SP--ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 308 (348)
T ss_dssp -CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHH
T ss_pred -CC--CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChh
Confidence 01 1112234567889999999999999999999987543
No 187
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.6e-38 Score=363.77 Aligned_cols=262 Identities=21% Similarity=0.223 Sum_probs=196.8
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCC------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE------ 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 756 (995)
.++|+..+.||+|+||+||+|.. .+++.||||++.... ......++.+|+.+++.++||||+++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 46799999999999999999976 468999999985432 2334567889999999999999999999996543
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
+.|+||||+++ ++.+.+.. .+++..+..++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~---iiHrDlkp~NIll~~~~~~kl~DFG~a~ 212 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 212 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCCCC-
T ss_pred eEEEEEeCCCC-CHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChHhEEEeCCCCEEEEEEEeee
Confidence 46999999976 57776642 3889999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh----
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE---- 912 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~---- 912 (995)
..... ......+||+.|+|||++.+..++.++||||+||++|||++|+.||......................
T Consensus 213 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~ 289 (464)
T 3ttj_A 213 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289 (464)
T ss_dssp ----C---CCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTT
T ss_pred ecCCC---cccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHH
Confidence 75432 22345689999999999999999999999999999999999999996543222222222211111100
Q ss_pred ---hhhhhcCCc--CCC-----------------CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 913 ---EFLSILDPR--LSM-----------------VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 913 ---~~~~~~d~~--~~~-----------------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....+... ... .....+..+.+++.+||+.||++|||++|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 290 LQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp SCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 001111100 000 011236778999999999999999999999875
No 188
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.1e-38 Score=368.32 Aligned_cols=250 Identities=22% Similarity=0.240 Sum_probs=196.2
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCC--CCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGF--GTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+. .+|+.||||++... ........+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35788899999999999999976 46899999998532 2223345678899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHH-DCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+ |+||||||+||+++.++.+||+|||+++....
T Consensus 227 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~g---iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 227 MEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp ECCCSSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EeeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHhhcCC---EEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999964 3468999999999999999999997 77 99999999999999999999999999986432
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
. .......+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+....
T Consensus 302 ~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~~~---------- 365 (446)
T 4ejn_A 302 D--GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH----EKLFELILMEE---------- 365 (446)
T ss_dssp -------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHCC----------
T ss_pred C--CcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH----HHHHHHHHhCC----------
Confidence 2 2223457899999999999999999999999999999999999999965321 12222211110
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQM 957 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++|| +++|++++
T Consensus 366 --~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~h 405 (446)
T 4ejn_A 366 --IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQH 405 (446)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred --CCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhC
Confidence 112334556789999999999999999 99999863
No 189
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.3e-38 Score=345.32 Aligned_cols=257 Identities=24% Similarity=0.335 Sum_probs=204.5
Q ss_pred hhccCCC-eeeccCceEEEEEEe---CCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 686 ECVKDGN-VIGRGGAGIVYHGKM---PNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 686 ~~~~~~~-~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
++|+..+ .||+|+||+||+|.+ .+++.||||++..... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~l 94 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWML 94 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEE
Confidence 4677777 899999999999954 3468899999854332 22356789999999999999999999999 5677899
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 95 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 95 VMEMAELGPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EEECCTTEEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEEeCCCCCHHHHHHh--CcCCCHHHHHHHHHHHHHHHHHHHhCC---eEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 9999999999999964 346899999999999999999999887 99999999999999999999999999987644
Q ss_pred CCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 841 GGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 841 ~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.... .......+++.|+|||++.+..++.++||||+|+++|+|++ |+.||..... ......+...
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~--------- 236 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEVTAMLEKG--------- 236 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTT---------
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH----HHHHHHHHcC---------
Confidence 3221 11223456789999999988889999999999999999999 9999965322 1122222111
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.....+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 237 --~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 279 (291)
T 1xbb_A 237 --ERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 279 (291)
T ss_dssp --CCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 1112334456789999999999999999999999999988643
No 190
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.2e-37 Score=339.38 Aligned_cols=260 Identities=22% Similarity=0.266 Sum_probs=205.7
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-----ChhHHHHHHHHHHhccCCCCceeEeEEEecCCc
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-----SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET 757 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 757 (995)
+.++|+..+.||+|+||.||+|+.. +++.||+|.+...... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 82 (283)
T 3bhy_A 3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD 82 (283)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence 3567999999999999999999875 6899999998543221 235778999999999999999999999999999
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC----CeEEeeec
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF----EAHVADFG 833 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~----~vkl~DfG 833 (995)
.++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++ .+||+|||
T Consensus 83 ~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 83 VVLILELVSGGELFDFLAE--KESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEeecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999999963 346899999999999999999999887 99999999999999877 89999999
Q ss_pred cccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
++....... ......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+.......
T Consensus 158 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~ 230 (283)
T 3bhy_A 158 IAHKIEAGN---EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETK----QETLTNISAVNYDF 230 (283)
T ss_dssp TCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTTCCCC
T ss_pred cceeccCCC---cccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcch----HHHHHHhHhcccCC
Confidence 998764322 22345689999999999999999999999999999999999999965321 11111111110000
Q ss_pred hhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH--HHccCCC
Q 001922 914 FLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ--MLSEFPR 963 (995)
Q Consensus 914 ~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~ 963 (995)
.. ......+..+.+++.+||+.||++||+++|+++ .++++.+
T Consensus 231 -----~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~ 274 (283)
T 3bhy_A 231 -----DE---EYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274 (283)
T ss_dssp -----CH---HHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHH
T ss_pred -----cc---hhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHH
Confidence 00 001123456889999999999999999999997 3555443
No 191
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=8.3e-38 Score=343.00 Aligned_cols=261 Identities=19% Similarity=0.254 Sum_probs=203.7
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEE-ecCCcceEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFC-SNKETNLLV 761 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~lv 761 (995)
+.++|+..+.||+|+||+||+|+. .+++.||||++.... ....+.+|++++++++|++++..+.++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc---cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 457899999999999999999986 578899999874322 223478899999999988877666655 667788999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeecccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKFL 838 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~~ 838 (995)
|||+ +++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||++ +.++.+||+|||+++..
T Consensus 84 ~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~ 158 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKY 158 (296)
T ss_dssp EECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECCGGGTTCEEECCCTTCEEC
T ss_pred EEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeeeeccCCCCeEEEecCccceec
Confidence 9999 99999999732 346899999999999999999999887 9999999999999 78899999999999876
Q ss_pred ccCCCC-----ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHH---HHHHHhcCC
Q 001922 839 IDGGAS-----ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQ---WSKRATNGR 910 (995)
Q Consensus 839 ~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~---~~~~~~~~~ 910 (995)
...... .......||+.|+|||++.+..++.++||||+||++|||++|+.||........... .........
T Consensus 159 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (296)
T 4hgt_A 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTP 238 (296)
T ss_dssp BCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSC
T ss_pred cCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccch
Confidence 543321 122356799999999999999999999999999999999999999976543322111 111111110
Q ss_pred hhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 911 KEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 911 ~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.. . .....+..+.+++.+||+.||++||+++++++.|+++..
T Consensus 239 ~~----~-------~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~ 280 (296)
T 4hgt_A 239 IE----V-------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HH----H-------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred hh----h-------hhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHH
Confidence 00 0 011234678999999999999999999999999998765
No 192
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8.1e-38 Score=353.83 Aligned_cols=253 Identities=15% Similarity=0.136 Sum_probs=206.2
Q ss_pred HhhccCCCeeeccCceEEEEEE------eCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC---CCCceeEeEEEecC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGK------MPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR---HRNIVRLLAFCSNK 755 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~ 755 (995)
.+.|+..+.||+|+||+||+|. ..+++.||||++.. .....+..|++++++++ |+||+++++++...
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP----ANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESS----CCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCC----CChhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 3568888999999999999993 45688999999843 23566888888888886 99999999999999
Q ss_pred CcceEEEEeccCCChhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---------
Q 001922 756 ETNLLVYEYMRNGSLGEALHG---KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS--------- 823 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~--------- 823 (995)
+..|+||||+++|+|.+++.. .....+++..++.++.||+.||+|||+.+ |+||||||+|||++.
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~---ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCE---IIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEecccccCccccc
Confidence 999999999999999999963 13467999999999999999999999777 999999999999998
Q ss_pred --CCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHH
Q 001922 824 --AFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQ 901 (995)
Q Consensus 824 --~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~ 901 (995)
++.+||+|||+++.+............+||+.|+|||++.+..++.++|||||||++|||++|+.||.......
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~---- 292 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE---- 292 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE----
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCc----
Confidence 89999999999986643333444566789999999999999999999999999999999999999985421110
Q ss_pred HHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCC-CCHHHHHHHHccCCCC
Q 001922 902 WSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIER-PRMREVVQMLSEFPRH 964 (995)
Q Consensus 902 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Pt~~evl~~L~~~~~~ 964 (995)
..........+ ....+.+++..|++.+|.+| |+++++.+.|+++...
T Consensus 293 --------------~~~~~~~~~~~--~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~ 340 (365)
T 3e7e_A 293 --------------CKPEGLFRRLP--HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340 (365)
T ss_dssp --------------EEECSCCTTCS--SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHH
T ss_pred --------------eeechhccccC--cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHH
Confidence 00111111111 24567789999999999999 5788888888876543
No 193
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.2e-37 Score=340.29 Aligned_cols=248 Identities=18% Similarity=0.254 Sum_probs=201.3
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcce
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNL 759 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~ 759 (995)
...++|+..+.||+|+||+||+|+.. +++.||+|++.... .......+.+|+.++.++ +||||+++++++.+++..+
T Consensus 8 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~ 87 (289)
T 1x8b_A 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHML 87 (289)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEE
T ss_pred cccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEE
Confidence 34678999999999999999999875 78999999985432 233456788899999999 8999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-------------
Q 001922 760 LVYEYMRNGSLGEALHGKK--GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA------------- 824 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~------------- 824 (995)
+||||+++++|.+++.... ...+++..++.++.||+.||.|||+++ |+||||||+||+++.+
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMS---LVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeecCCCHHHEEEcCCCCCcccccccccc
Confidence 9999999999999996422 256899999999999999999999887 9999999999999844
Q ss_pred ------CCeEEeeeccccccccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 001922 825 ------FEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV 897 (995)
Q Consensus 825 ------~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~ 897 (995)
..+||+|||.+...... ....||+.|+|||++.+. .++.++||||+|+++|+|++|..|+... .
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~---~ 235 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSP------QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNG---D 235 (289)
T ss_dssp -----CCCEEECCCTTCEETTCS------CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSS---H
T ss_pred cccCCceEEEEcccccccccCCc------cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcch---h
Confidence 47999999999876432 234589999999998766 5678999999999999999998876421 1
Q ss_pred hHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 898 DIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.. . .+........+...+..+.+++.+||+.||++||+++|+++.
T Consensus 236 ~~----~-----------~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 280 (289)
T 1x8b_A 236 QW----H-----------EIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKH 280 (289)
T ss_dssp HH----H-----------HHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred HH----H-----------HHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhC
Confidence 11 1 111122223344456678999999999999999999999863
No 194
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=1.4e-37 Score=343.63 Aligned_cols=263 Identities=21% Similarity=0.336 Sum_probs=201.3
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..+|+..+.||+|+||.||+|.. .+|+.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 31 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 110 (310)
T 2wqm_A 31 LANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 110 (310)
T ss_dssp GGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEE
Confidence 45788999999999999999976 578999999985422 223356688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 762 YEYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
|||+++++|.+++.. .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++....
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~ 187 (310)
T 2wqm_A 111 LELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS 187 (310)
T ss_dssp EECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCC-------
T ss_pred EecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCcHHHEEEcCCCCEEEEeccceeeec
Confidence 999999999999863 23456899999999999999999999887 9999999999999999999999999998654
Q ss_pred cCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 840 DGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
... .......|++.|+|||++.+..++.++||||||+++|+|++|+.||.... ...............
T Consensus 188 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~-------- 255 (310)
T 2wqm_A 188 SKT--TAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK--MNLYSLCKKIEQCDY-------- 255 (310)
T ss_dssp -------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-----CCHHHHHHHHHTTCS--------
T ss_pred CCC--ccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccc--hhHHHHHHHhhcccC--------
Confidence 322 12234568999999999999999999999999999999999999996432 222222222222110
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
+ .......+..+.+++.+||+.||++||+++|+++.|+++...
T Consensus 256 ~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~ 298 (310)
T 2wqm_A 256 P--PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHAC 298 (310)
T ss_dssp C--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred C--CCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 0 011123456789999999999999999999999999987653
No 195
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.7e-39 Score=355.04 Aligned_cols=263 Identities=25% Similarity=0.341 Sum_probs=191.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhc--cCCCCceeEeEEEecCC----cc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGN--IRHRNIVRLLAFCSNKE----TN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~~~----~~ 758 (995)
.++|+..+.||+|+||+||+|++ +++.||||++.. .....+.+|.+++.. ++||||+++++++.... ..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 76 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-C-TTSCEEEEECC-----TTHHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEE
T ss_pred cceeeehhhccCCCCeEEEEEEE-cCcceEEEEecc----cchhhHHHHHHHHHHHhccCcceeeeeeecccCCCcccee
Confidence 35789999999999999999987 488999999842 335567788888887 78999999999997766 78
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLH--------HDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH--------~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
++||||+++|+|.+++... .+++..++.++.|++.|++||| +.+ |+||||||+||+++.++.+||+
T Consensus 77 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~Nil~~~~~~~kl~ 150 (303)
T 3gxj_A 77 WLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTCCIA 150 (303)
T ss_dssp EEEEECCTTCCHHHHHHHC---CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BC
T ss_pred EEEEeccCCCCHHHHHhcc---CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCC---EeeCcCCHHHeEECCCCCEEEe
Confidence 9999999999999999643 4778888999999999999999 777 9999999999999999999999
Q ss_pred eeccccccccCCCCc--cccccccCcccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCCCCC
Q 001922 831 DFGLAKFLIDGGASE--CMSAIAGSYGYIAPEYAYTL------RVDEKSDVYSFGVVLLELLTG----------RRPVGD 892 (995)
Q Consensus 831 DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~Pf~~ 892 (995)
|||+++......... ......||+.|+|||++.+. .++.++|||||||++|||++| ..||..
T Consensus 151 DFg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~ 230 (303)
T 3gxj_A 151 DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYD 230 (303)
T ss_dssp CCCC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTT
T ss_pred ecCcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccc
Confidence 999997654432221 12334799999999998776 445789999999999999999 667654
Q ss_pred CCCCc-hHHHHHHHHhcCChhhhhhhcCCcCC--CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 893 FGDGV-DIVQWSKRATNGRKEEFLSILDPRLS--MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 893 ~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
..... ............ ...+..+ .....++..+.+++.+||+.||++|||++|+++.|+++.+..
T Consensus 231 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 231 LVPSDPSVEEMRKVVCEQ-------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp TCC-CCCCC-CHHHHTTS-------CCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred cCCCCccHHHHHHHHHHh-------hcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 32111 111111111110 0111111 112367788999999999999999999999999999998754
No 196
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=8.6e-38 Score=346.56 Aligned_cols=264 Identities=22% Similarity=0.280 Sum_probs=205.7
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEe----cCCcceE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCS----NKETNLL 760 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~----~~~~~~l 760 (995)
++|+..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 107 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH-EQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWL 107 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC-CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEE
Confidence 5788999999999999999986 57899999988442 3334567889999999999999999999986 3457799
Q ss_pred EEEeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 761 VYEYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
||||+++|+|.+++.. ..+..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||++...
T Consensus 108 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~ 184 (317)
T 2buj_A 108 LLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKG---YAHRDLKPTNILLGDEGQPVLMDLGSMNQA 184 (317)
T ss_dssp EEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTSCEEECCCSSCEES
T ss_pred EEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCCEEEEecCcchhc
Confidence 9999999999999864 23567899999999999999999999887 999999999999999999999999998764
Q ss_pred ccCCCCc-------cccccccCcccccccccccCC---CCcccchhhHHHHHHHHHhCCCCCCCCCC-CchHHHHHHHHh
Q 001922 839 IDGGASE-------CMSAIAGSYGYIAPEYAYTLR---VDEKSDVYSFGVVLLELLTGRRPVGDFGD-GVDIVQWSKRAT 907 (995)
Q Consensus 839 ~~~~~~~-------~~~~~~gt~~y~aPE~~~~~~---~~~~~DvwSlGvil~elltg~~Pf~~~~~-~~~~~~~~~~~~ 907 (995)
....... ......||+.|+|||++.+.. ++.++||||||+++|||++|+.||..... ........ .
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~---~ 261 (317)
T 2buj_A 185 CIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAV---Q 261 (317)
T ss_dssp CEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHH---H
T ss_pred ccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHh---h
Confidence 3211100 112345799999999987554 68999999999999999999999953110 00111100 0
Q ss_pred cCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcc
Q 001922 908 NGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSD 967 (995)
Q Consensus 908 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 967 (995)
.......+...+..+.+++.+||+.||++||+++|+++.|+++....+.
T Consensus 262 -----------~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 262 -----------NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp -----------CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred -----------ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 0000011223456799999999999999999999999999998765544
No 197
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=5e-38 Score=341.62 Aligned_cols=248 Identities=27% Similarity=0.394 Sum_probs=200.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||+||+|+.. +++.||+|++.... .......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 357888999999999999999764 57789999984321 112245688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++|+|.+++.. ...+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 88 ~e~~~~~~l~~~l~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~ 162 (279)
T 3fdn_A 88 LEYAPLGTVYRELQK--LSKFDEQRTATYITELANALSYCHSKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAPSS 162 (279)
T ss_dssp ECCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---CEECCCCGGGEEECTTSCEEECSCCEESCC---
T ss_pred EecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHhEEEcCCCCEEEEeccccccCCcc
Confidence 999999999999963 346899999999999999999999777 999999999999999999999999998654322
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......|++.|+|||.+.+..++.++||||+|+++|+|++|+.||.... .......+... .
T Consensus 163 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~---------~-- 223 (279)
T 3fdn_A 163 ----RRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANT----YQETYKRISRV---------E-- 223 (279)
T ss_dssp ---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSS----HHHHHHHHHHT---------C--
T ss_pred ----cccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCc----HHHHHHHHHhC---------C--
Confidence 2234578999999999999999999999999999999999999996422 11111111111 0
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++||+++|++++
T Consensus 224 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 224 -FTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp -CCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred -CCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11233345678899999999999999999999974
No 198
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=1.4e-37 Score=342.40 Aligned_cols=250 Identities=24% Similarity=0.303 Sum_probs=208.3
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.+.|+..+.||+|+||.||+|+. .+++.||+|++.........+.+.+|+.++++++||||+++++++.+....++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 100 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIME 100 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEE
Confidence 45688899999999999999976 46899999998655555556789999999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|+++++|.+++.. ..+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.......
T Consensus 101 ~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~- 173 (303)
T 3a7i_A 101 YLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ- 173 (303)
T ss_dssp CCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTTCEECBTTB-
T ss_pred eCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChheEEECCCCCEEEeecccceecCccc-
Confidence 9999999999953 46899999999999999999999887 9999999999999999999999999998764332
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS 923 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 923 (995)
.......||+.|+|||++.+..++.++||||||+++|+|++|+.||..... ......+... ...
T Consensus 174 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~-----------~~~ 237 (303)
T 3a7i_A 174 -IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIPKN-----------NPP 237 (303)
T ss_dssp -CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHS-----------CCC
T ss_pred -cccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH----HHHHHHhhcC-----------CCC
Confidence 122455789999999999999999999999999999999999999965321 1111111111 011
Q ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 924 MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 924 ~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...+..+.+++.+||+.||++||+++|+++.
T Consensus 238 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 238 TLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp CCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred CCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 1222345678999999999999999999999875
No 199
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-37 Score=343.65 Aligned_cols=264 Identities=21% Similarity=0.225 Sum_probs=200.6
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC--ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH--SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
..++|+..+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++++++||||+++++++.+++..|+
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 3567899999999999999999864 6889999998543222 223668899999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++.....
T Consensus 112 v~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 186 (309)
T 2h34_A 112 DMRLINGVDLAAMLRR--QGPLAPPRAVAIVRQIGSALDAAHAAG---ATHRDVKPENILVSADDFAYLVDFGIASATTD 186 (309)
T ss_dssp EEECCCCEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECSCCC------
T ss_pred EEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCc---CCcCCCChHHEEEcCCCCEEEecCccCccccc
Confidence 9999999999999964 346899999999999999999999887 99999999999999999999999999986543
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
... .......|++.|+|||++.+..++.++||||||+++|||++|+.||.... ............ +
T Consensus 187 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~----~~~~~~~~~~~~---------~ 252 (309)
T 2h34_A 187 EKL-TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQ----LSVMGAHINQAI---------P 252 (309)
T ss_dssp -----------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCH----HHHHHHHHHSCC---------C
T ss_pred ccc-ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCch----HHHHHHHhccCC---------C
Confidence 221 22234578999999999999999999999999999999999999996421 111111111110 0
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCC-CHHHHHHHHccCCCCCc
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERP-RMREVVQMLSEFPRHSS 966 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RP-t~~evl~~L~~~~~~~~ 966 (995)
.....+...+..+.+++.+||+.||++|| +++++++.|++......
T Consensus 253 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 253 RPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp CGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred CccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 01112334456788999999999999999 99999999998876554
No 200
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-37 Score=348.82 Aligned_cols=269 Identities=22% Similarity=0.262 Sum_probs=201.6
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCC----hhHHHHHHHHHHhccCCCCceeEeEEEecCC
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHS----HDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE 756 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 756 (995)
....++|+..+.||+|+||.||+|+.. +|+.||||++....... ....+.+|++++++++||||+++++++.+.+
T Consensus 6 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp -------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred HHHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 445678999999999999999999874 58999999985322211 1346789999999999999999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..++||||+++ +|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 86 ~~~lv~e~~~~-~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~ 160 (346)
T 1ua2_A 86 NISLVFDFMET-DLEVIIKD-NSLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK 160 (346)
T ss_dssp CCEEEEECCSE-EHHHHHTT-CCSSCCSSHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECCCGGGS
T ss_pred ceEEEEEcCCC-CHHHHHHh-cCcCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCCHHHEEEcCCCCEEEEecccce
Confidence 99999999986 89888864 3456888899999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.+.... .......||+.|+|||++.+. .++.++||||+||++|||++|..||....+..................+.
T Consensus 161 ~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 238 (346)
T 1ua2_A 161 SFGSPN--RAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238 (346)
T ss_dssp TTTSCC--CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred eccCCc--ccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence 764322 223456789999999998764 58899999999999999999999986543333333333322221111111
Q ss_pred hhcC-------CcCCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SILD-------PRLSMVP-----KEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~d-------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
+... ......+ ...+..+.+++.+||+.||++|||++|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 239 DMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp STTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 1100 0001111 2345679999999999999999999999975
No 201
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.8e-37 Score=347.91 Aligned_cols=265 Identities=26% Similarity=0.343 Sum_probs=211.1
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhc--cCCCCceeEeEEEecCC---
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGN--IRHRNIVRLLAFCSNKE--- 756 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~hpniv~~~~~~~~~~--- 756 (995)
..+.++|+..+.||+|+||+||+|+. +++.||||++.. .....+.+|.++++. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSS----REERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECG----GGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCc----hhHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 44677899999999999999999988 589999999842 335667888888887 68999999999998765
Q ss_pred -cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEecCCCCCCEEECCCCCe
Q 001922 757 -TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLH--------HDCSPLIVHRDVKSNNILLNSAFEA 827 (995)
Q Consensus 757 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH--------~~~~~~iiHrDlkp~Nill~~~~~v 827 (995)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| +.+ |+||||||+||+++.++.+
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~---ivH~Dlkp~NIll~~~~~~ 186 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPA---IAHRDLKSKNILVKKNGTC 186 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCE---EECSCCSGGGEEECTTSCE
T ss_pred ceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCC---eeeCCCCHHHEEECCCCCE
Confidence 78999999999999999964 35899999999999999999999 666 9999999999999999999
Q ss_pred EEeeeccccccccCCCCc--cccccccCcccccccccccC------CCCcccchhhHHHHHHHHHhC----------CCC
Q 001922 828 HVADFGLAKFLIDGGASE--CMSAIAGSYGYIAPEYAYTL------RVDEKSDVYSFGVVLLELLTG----------RRP 889 (995)
Q Consensus 828 kl~DfGla~~~~~~~~~~--~~~~~~gt~~y~aPE~~~~~------~~~~~~DvwSlGvil~elltg----------~~P 889 (995)
||+|||+++......... ......||+.|+|||++.+. .++.++||||||+++|||++| ..|
T Consensus 187 kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p 266 (342)
T 1b6c_B 187 CIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLP 266 (342)
T ss_dssp EECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCT
T ss_pred EEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccC
Confidence 999999998764432211 22445799999999998765 334789999999999999999 788
Q ss_pred CCCCCCCc-hHHHHHHHHhcCChhhhhhhcCCcCC--CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 890 VGDFGDGV-DIVQWSKRATNGRKEEFLSILDPRLS--MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 890 f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
|....... ....+....... ...+..+ ....+++..+.+++.+||+.||++||+++||+++|+++.+.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 267 YYDLVPSDPSVEEMRKVVCEQ-------KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp TTTTSCSSCCHHHHHHHHTTS-------CCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred ccccCcCcccHHHHHHHHHHH-------HhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHH
Confidence 86643322 222332222211 0111111 12236778899999999999999999999999999987654
No 202
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.5e-37 Score=339.83 Aligned_cols=272 Identities=20% Similarity=0.262 Sum_probs=207.5
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||.||+|+.. +++.||||++.... .......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56888899999999999999875 68999999985332 22234678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
|++ ++|.+++.......+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 83 ~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~- 157 (299)
T 2r3i_A 83 FLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV- 157 (299)
T ss_dssp CCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS-
T ss_pred ccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc-
Confidence 997 59999997665567899999999999999999999887 9999999999999999999999999998764321
Q ss_pred CccccccccCcccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh-----h
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLR-VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS-----I 917 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 917 (995)
.......+|+.|+|||++.+.. ++.++||||+|+++|+|++|+.||.......................+.. .
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (299)
T 2r3i_A 158 -RTYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPD 236 (299)
T ss_dssp -BCTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred -cccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCchhhhhHhhcCcc
Confidence 2223457899999999988765 78999999999999999999999976433222333322222111100000 0
Q ss_pred cCCcCCC--------CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH--HHccCCC
Q 001922 918 LDPRLSM--------VPKEEAMHLLFVAMLCIQENSIERPRMREVVQ--MLSEFPR 963 (995)
Q Consensus 918 ~d~~~~~--------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~--~L~~~~~ 963 (995)
..+.... .....+..+.+++.+|++.||++|||++|+++ .++++..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~hp~~~~~~~ 292 (299)
T 2r3i_A 237 YKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 292 (299)
T ss_dssp CCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred cchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcChhhhcCCC
Confidence 0011100 01124567889999999999999999999987 3444443
No 203
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=1.2e-37 Score=341.91 Aligned_cols=260 Identities=19% Similarity=0.248 Sum_probs=206.3
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEE-ecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFC-SNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~-~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ..+.+.+|+.++++++|++++..+.++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 45788999999999999999986 578999999985432 234688999999999988877666655 6677889999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC---CCCCeEEeeeccccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN---SAFEAHVADFGLAKFLI 839 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~---~~~~vkl~DfGla~~~~ 839 (995)
||+ +++|.+++.. ....+++..++.++.|++.||+|||+++ |+||||||+||+++ .++.+||+|||+++...
T Consensus 85 e~~-~~~L~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~ 159 (296)
T 3uzp_A 85 ELL-GPSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKN---FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYR 159 (296)
T ss_dssp ECC-CCBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred Eec-CCCHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHeEEecCCCCCeEEEeeCCCccccc
Confidence 999 8999999973 2356899999999999999999999887 99999999999994 78899999999998765
Q ss_pred cCCCCc-----cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCch---HHHHHHHHhcCCh
Q 001922 840 DGGASE-----CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVD---IVQWSKRATNGRK 911 (995)
Q Consensus 840 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~---~~~~~~~~~~~~~ 911 (995)
...... ......||+.|+|||++.+..++.++||||+||++|||++|+.||........ .............
T Consensus 160 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 239 (296)
T 3uzp_A 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI 239 (296)
T ss_dssp CTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH
T ss_pred ccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCch
Confidence 433211 12456799999999999999999999999999999999999999986443221 1111111111100
Q ss_pred hhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 912 EEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 912 ~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.. .....+..+.+++.+||+.||++||+++++++.|+++..
T Consensus 240 ~~-----------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 280 (296)
T 3uzp_A 240 EV-----------LCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH 280 (296)
T ss_dssp HH-----------HTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHH
T ss_pred HH-----------HHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHH
Confidence 00 011234678999999999999999999999999998764
No 204
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-38 Score=354.31 Aligned_cols=256 Identities=25% Similarity=0.272 Sum_probs=206.0
Q ss_pred HhhccCCCeeeccCceEEEEEEe----CCCcEEEEEEecCCC---CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM----PNGVEIAVKKLLGFG---THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKE 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~----~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~ 756 (995)
.++|+..+.||+|+||+||+|+. .+++.||||++.... .....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 35789999999999999999987 378999999985322 122345577899999999 6999999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQ--RERFTEHEVQIYVGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred eEEEEeecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 99999999999999999964 346899999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYT--LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
.+..... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....................
T Consensus 208 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---- 282 (355)
T 1vzo_A 208 EFVADET-ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE---- 282 (355)
T ss_dssp ECCGGGG-GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCC----
T ss_pred ecccCCC-CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccC----
Confidence 6533221 22234679999999999885 3478999999999999999999999976544444443333322211
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCC-----CHHHHHHHH
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERP-----RMREVVQML 958 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----t~~evl~~L 958 (995)
...+...+..+.+++.+||+.||++|| +++|+++..
T Consensus 283 --------~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 283 --------PPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp --------CCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred --------CCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 112334556788999999999999999 999998753
No 205
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.4e-37 Score=338.84 Aligned_cols=254 Identities=25% Similarity=0.304 Sum_probs=203.0
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC---CCChhHHHHHHHHHHhccCCCCceeEeEEE--ecCCc
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG---THSHDHGFRAEIQTLGNIRHRNIVRLLAFC--SNKET 757 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--~~~~~ 757 (995)
+.++|+..+.||+|+||.||+|.. .+++.||+|++.... .......+.+|++++++++||||+++++++ .+...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 457899999999999999999987 468899999985321 123456789999999999999999999998 45568
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.++||||++++ +.+++.......+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++..
T Consensus 83 ~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~NIl~~~~~~~kl~dfg~~~~ 158 (305)
T 2wtk_C 83 MYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEA 158 (305)
T ss_dssp EEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEcCCCcEEeeccccccc
Confidence 89999999876 777776655677999999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCCCccccccccCcccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLR--VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
..............||+.|+|||++.+.. ++.++||||+|+++|||++|+.||... ........+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~----~~~~~~~~i~~~~----- 229 (305)
T 2wtk_C 159 LHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGD----NIYKLFENIGKGS----- 229 (305)
T ss_dssp CCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCS----SHHHHHHHHHHCC-----
T ss_pred cCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHhcCC-----
Confidence 65433334445567999999999987644 478999999999999999999999642 2222222222111
Q ss_pred hhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+..++..+.+++.+||+.||++||+++|+++.
T Consensus 230 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 230 -------YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp -------CCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred -------CCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11223455678899999999999999999999964
No 206
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=7.3e-38 Score=346.98 Aligned_cols=255 Identities=23% Similarity=0.275 Sum_probs=196.8
Q ss_pred HhhccC-CCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKD-GNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~-~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv 761 (995)
.+.|++ .+.||+|+||+||+|+. .+++.||||++... .......+.+|++++.++ +||||+++++++.+.+..|+|
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 89 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQ-PGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV 89 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECC-SSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeC-cchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence 345666 47899999999999975 46899999998543 334467789999999885 799999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC---eEEeeecccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE---AHVADFGLAKFL 838 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~---vkl~DfGla~~~ 838 (995)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++. +||+|||++...
T Consensus 90 ~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~ 164 (316)
T 2ac3_A 90 FEKMRGGSILSHIHK--RRHFNELEASVVVQDVASALDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGI 164 (316)
T ss_dssp EECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEESCSSSSCSEEECCTTCCC--
T ss_pred EEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---ceeCCCCHHHEEEccCCCcCceEEEEccCcccc
Confidence 999999999999964 346899999999999999999999887 999999999999998776 999999998765
Q ss_pred ccCCC-----CccccccccCccccccccccc-----CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCch----------
Q 001922 839 IDGGA-----SECMSAIAGSYGYIAPEYAYT-----LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVD---------- 898 (995)
Q Consensus 839 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~-----~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~---------- 898 (995)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||........
T Consensus 165 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~ 244 (316)
T 2ac3_A 165 KLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPA 244 (316)
T ss_dssp -----------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHH
T ss_pred ccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchh
Confidence 32211 111234569999999999875 5688999999999999999999999976432210
Q ss_pred -HHHHHHHHhcCChhhhhhhcCCcCCCCCH----HHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 899 -IVQWSKRATNGRKEEFLSILDPRLSMVPK----EEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 899 -~~~~~~~~~~~~~~~~~~~~d~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.......+.. ... ..+. ..+..+.+++.+||+.||++||+++|+++.
T Consensus 245 ~~~~~~~~i~~-----------~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 245 CQNMLFESIQE-----------GKY-EFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp HHHHHHHHHHH-----------CCC-CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HHHHHHHHHhc-----------cCc-ccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 0111111111 111 1111 235678999999999999999999999873
No 207
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=3e-38 Score=355.44 Aligned_cols=262 Identities=18% Similarity=0.171 Sum_probs=206.4
Q ss_pred hhccCCCeeeccCceEEEEEEeCC---------CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCcee---------
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPN---------GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVR--------- 747 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~--------- 747 (995)
++|+..+.||+|+||.||+|+... ++.||+|++... ..+.+|++++++++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 578899999999999999998753 789999998532 35788999999999999987
Q ss_pred ------EeEEEec-CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEE
Q 001922 748 ------LLAFCSN-KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNIL 820 (995)
Q Consensus 748 ------~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nil 820 (995)
+++++.. +...|+||||+ +++|.+++.......+++..++.++.||+.||.|||+++ |+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENE---YVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCC---ccCCCCCHHHEE
Confidence 5677765 67889999999 999999998654567999999999999999999999887 999999999999
Q ss_pred ECCCC--CeEEeeeccccccccCCCC-----ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCC
Q 001922 821 LNSAF--EAHVADFGLAKFLIDGGAS-----ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDF 893 (995)
Q Consensus 821 l~~~~--~vkl~DfGla~~~~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~ 893 (995)
++.++ .+||+|||+++.+...... .......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~ 271 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNC 271 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGG
T ss_pred EcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccC
Confidence 99998 8999999999876432211 1123457999999999999999999999999999999999999999765
Q ss_pred C-CCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 894 G-DGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 894 ~-~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
. ....+........... ....+... .....+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 336 (352)
T 2jii_A 272 LPNTEDIMKQKQKFVDKP----GPFVGPCG--HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQ 336 (352)
T ss_dssp TTCHHHHHHHHHHHHHSC----CCEECTTS--CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHhccCCh----hhhhhhcc--ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHH
Confidence 4 2222222222221111 01111110 011234678999999999999999999999999998764
No 208
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2e-37 Score=350.06 Aligned_cols=265 Identities=23% Similarity=0.321 Sum_probs=199.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCC------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE------ 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 756 (995)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......++.+|++++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 45788999999999999999976 568999999985432 2223456889999999999999999999997653
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 176 (367)
T 1cm8_A 104 DFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLAR 176 (367)
T ss_dssp CCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCE
T ss_pred eEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCcCHHHEEEcCCCCEEEEeeeccc
Confidence 459999999 7899999964 35889999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.||........+.......... ...+.
T Consensus 177 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~-~~~~~ 250 (367)
T 1cm8_A 177 QADS-----EMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP-PAEFV 250 (367)
T ss_dssp ECCS-----SCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCC-CHHHH
T ss_pred cccc-----ccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC-CHHHH
Confidence 7532 2244578999999999877 679999999999999999999999997543222222222211111 11111
Q ss_pred hhc----------------CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCC
Q 001922 916 SIL----------------DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFP 962 (995)
Q Consensus 916 ~~~----------------d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 962 (995)
..+ ...+.......+..+.+++.+|++.||++|||++|++++ ++++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhcChHHHhhc
Confidence 000 011111223446678999999999999999999999984 55543
No 209
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=6.2e-37 Score=341.71 Aligned_cols=257 Identities=23% Similarity=0.254 Sum_probs=201.3
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEec--CCcceEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSN--KETNLLV 761 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~--~~~~~lv 761 (995)
++|+..+.||+|+||+||+|+. .+++.||||++.. ...+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~----~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP----VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS----CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc----cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5788999999999999999975 5789999999842 33577899999999997 9999999999987 5678999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC-CeEEeeecccccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF-EAHVADFGLAKFLID 840 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~-~vkl~DfGla~~~~~ 840 (995)
|||+++++|.+++. .+++..++.++.|++.||+|||+.+ |+||||||+||+++.++ .+||+|||+++.+..
T Consensus 112 ~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMG---IMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp EECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred EeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 99999999999985 3788999999999999999999887 99999999999999777 899999999987643
Q ss_pred CCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhc-----------
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATN----------- 908 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~----------- 908 (995)
.. ......|++.|+|||++.+ ..++.++||||+||++|||++|+.||....+..+..........
T Consensus 184 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQ---EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TC---CCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CC---ccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence 32 2245578999999999877 67899999999999999999999999654332222111111110
Q ss_pred --CChhhhhhhcCCcC---------CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 909 --GRKEEFLSILDPRL---------SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 909 --~~~~~~~~~~d~~~---------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....+........ ...+...+..+.+++.+||+.||++|||++|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~h 320 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 320 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 00000101100000 01112246778999999999999999999999873
No 210
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=8e-38 Score=365.01 Aligned_cols=271 Identities=21% Similarity=0.220 Sum_probs=188.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEec-----CCc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN-----KET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-----~~~ 757 (995)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......++.+|++++++++|||||++++++.. ...
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999764 68999999985432 22345678899999999999999999999843 356
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||+ +|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 132 ~~lv~e~~-~~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~---iiHrDlKp~NILl~~~~~~kl~DFGla~~ 205 (458)
T 3rp9_A 132 LYVVLEIA-DSDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLART 205 (458)
T ss_dssp EEEEECCC-SEEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEEecc-ccchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCC---cCCCCCChhhEEECCCCCEeecccccchh
Confidence 89999998 4699999963 456999999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCCC-------------------------ccccccccCccccccccc-ccCCCCcccchhhHHHHHHHHHh------
Q 001922 838 LIDGGAS-------------------------ECMSAIAGSYGYIAPEYA-YTLRVDEKSDVYSFGVVLLELLT------ 885 (995)
Q Consensus 838 ~~~~~~~-------------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~ellt------ 885 (995)
+...... ......+||+.|+|||++ ....++.++||||+||++|||++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~ 285 (458)
T 3rp9_A 206 VDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENV 285 (458)
T ss_dssp TTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTC
T ss_pred ccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccc
Confidence 6432111 123456789999999976 56679999999999999999999
Q ss_pred -----CCCCCCCCCCC-------------------chHHHHHHHHhcCChhhh------------hhhcCCc----CCCC
Q 001922 886 -----GRRPVGDFGDG-------------------VDIVQWSKRATNGRKEEF------------LSILDPR----LSMV 925 (995)
Q Consensus 886 -----g~~Pf~~~~~~-------------------~~~~~~~~~~~~~~~~~~------------~~~~d~~----~~~~ 925 (995)
|+.+|...... .+................ ...+... +...
T Consensus 286 ~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (458)
T 3rp9_A 286 AYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAER 365 (458)
T ss_dssp SSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGG
T ss_pred cccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHH
Confidence 55555332100 011111111111100000 0000000 0011
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccC
Q 001922 926 PKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEF 961 (995)
Q Consensus 926 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~ 961 (995)
.+..+..+.+++.+||+.||++|||++|++++ ++++
T Consensus 366 ~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 366 FPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp STTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred CCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 12335678899999999999999999999985 4444
No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=9.3e-38 Score=349.34 Aligned_cols=268 Identities=24% Similarity=0.337 Sum_probs=197.0
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHH--HhccCCCCceeEeEEEec-----CCcc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQT--LGNIRHRNIVRLLAFCSN-----KETN 758 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~hpniv~~~~~~~~-----~~~~ 758 (995)
++|+..+.||+|+||+||+|+. +++.||||++.. .....+..|.++ +..++||||+++++++.. ....
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~----~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 87 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSF----ANRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEY 87 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEG----GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeec----cchhhHHHHHHHHHHHhccCcchhhheecccccccCCCceE
Confidence 5688889999999999999987 689999999842 223445555554 455899999999986532 3356
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc---------CCCCeEecCCCCCCEEECCCCCeEE
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD---------CSPLIVHRDVKSNNILLNSAFEAHV 829 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---------~~~~iiHrDlkp~Nill~~~~~vkl 829 (995)
++||||+++|+|.+++... ..++..++.++.||+.||+|||+. + |+||||||+||+++.++.+||
T Consensus 88 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~---ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 88 LLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPA---ISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCC---EECSSCSGGGEEECTTSCEEE
T ss_pred EEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccc---eeecccccceEEEcCCCcEEE
Confidence 8999999999999999643 358899999999999999999976 5 999999999999999999999
Q ss_pred eeeccccccccCCC------CccccccccCccccccccccc-------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCC
Q 001922 830 ADFGLAKFLIDGGA------SECMSAIAGSYGYIAPEYAYT-------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDG 896 (995)
Q Consensus 830 ~DfGla~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~ 896 (995)
+|||+++.+..... ........||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 162 ~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~ 241 (336)
T 3g2f_A 162 SDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241 (336)
T ss_dssp CCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCC
T ss_pred eeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccch
Confidence 99999987643221 122234579999999999876 45678999999999999999998887543221
Q ss_pred chHHH-HHHHHhcC-Chhhhhhhc-----CCcCC---CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCC
Q 001922 897 VDIVQ-WSKRATNG-RKEEFLSIL-----DPRLS---MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRH 964 (995)
Q Consensus 897 ~~~~~-~~~~~~~~-~~~~~~~~~-----d~~~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~ 964 (995)
..... +....... ........+ .+..+ ......+..+.+++.+||+.||++|||++|+++.|+++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~ 319 (336)
T 3g2f_A 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMI 319 (336)
T ss_dssp CCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred hHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHH
Confidence 11000 00000000 000000000 11111 12234777899999999999999999999999999987643
No 212
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.3e-37 Score=351.58 Aligned_cols=263 Identities=24% Similarity=0.318 Sum_probs=204.2
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
++|+..+.||+|+||+||+|+.. +++.||+|++.........+.+.+|+.++++++||||+++++++.+++..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 46888899999999999999875 68999999986544444556789999999999999999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~ 843 (995)
+++++|.+++.. ...+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-- 185 (360)
T 3eqc_A 113 MDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-- 185 (360)
T ss_dssp CTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHHHC---CCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH--
T ss_pred CCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHhCC---EEcCCccHHHEEECCCCCEEEEECCCCcccccc--
Confidence 999999999964 34688999999999999999999985 7 999999999999999999999999999765322
Q ss_pred CccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcC--------------
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNG-------------- 909 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~-------------- 909 (995)
......||+.|+|||++.+..++.++||||+||++|+|++|+.||...................
T Consensus 186 --~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (360)
T 3eqc_A 186 --MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRP 263 (360)
T ss_dssp --C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------------
T ss_pred --cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCc
Confidence 1234578999999999999999999999999999999999999996532111100000000000
Q ss_pred -------------ChhhhhhhcCCcCC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 910 -------------RKEEFLSILDPRLS-MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 910 -------------~~~~~~~~~d~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.......+...... ......+..+.+++.+||+.||++|||++|++++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 264 LNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp ----------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred ccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000111111 1112245678999999999999999999999864
No 213
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=4.8e-37 Score=346.74 Aligned_cols=256 Identities=24% Similarity=0.351 Sum_probs=204.8
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCC-------hhHHHHHHHHHHhcc-CCCCceeEeEEE
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHS-------HDHGFRAEIQTLGNI-RHRNIVRLLAFC 752 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l-~hpniv~~~~~~ 752 (995)
..+.++|+..+.||+|+||.||+|+.. +|+.||||++....... ..+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 456678999999999999999999875 79999999985433211 134578899999999 799999999999
Q ss_pred ecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeee
Q 001922 753 SNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADF 832 (995)
Q Consensus 753 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~Df 832 (995)
......|+||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~g---i~H~Dlkp~NIl~~~~~~ikl~Df 244 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTE--KVALSEKETRSIMRSLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDF 244 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEEec
Confidence 999999999999999999999963 346899999999999999999999887 999999999999999999999999
Q ss_pred ccccccccCCCCccccccccCccccccccccc------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYT------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
|++..+.... ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+
T Consensus 245 G~~~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~----~~~~~~i 317 (365)
T 2y7j_A 245 GFSCHLEPGE---KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ----ILMLRMI 317 (365)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH
T ss_pred CcccccCCCc---ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH----HHHHHHH
Confidence 9998764332 2345679999999998863 3588999999999999999999999965321 1111111
Q ss_pred hcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 907 TNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
......... +.. ...+..+.+++.+||+.||++||+++|+++.
T Consensus 318 ~~~~~~~~~----~~~----~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 360 (365)
T 2y7j_A 318 MEGQYQFSS----PEW----DDRSSTVKDLISRLLQVDPEARLTAEQALQH 360 (365)
T ss_dssp HHTCCCCCH----HHH----SSSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred HhCCCCCCC----ccc----ccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 111000000 000 1234568899999999999999999999873
No 214
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=2.4e-37 Score=363.43 Aligned_cols=259 Identities=24% Similarity=0.304 Sum_probs=206.3
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.+.++|+..+.||+|+||+||+|+.. +++.||||++.... .......+.+|++++++++||||+++++++.+....|+
T Consensus 19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 98 (486)
T 3mwu_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (486)
T ss_dssp HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence 46788999999999999999999874 78999999984321 23345678999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC---CCCCeEEeeeccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN---SAFEAHVADFGLAKF 837 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~---~~~~vkl~DfGla~~ 837 (995)
||||+.+|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||+++ .++.+||+|||+++.
T Consensus 99 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 173 (486)
T 3mwu_A 99 VGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTC 173 (486)
T ss_dssp EECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEESSSSTTCCEEECSCSCTTT
T ss_pred EEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCchHHEEEecCCCCCCEEEEECCcCeE
Confidence 9999999999998864 346899999999999999999999887 99999999999995 456799999999987
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
+... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+......
T Consensus 174 ~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~----- 240 (486)
T 3mwu_A 174 FQQN---TKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILKRVETGKYA----- 240 (486)
T ss_dssp BCCC-------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHTCCC-----
T ss_pred CCCC---CccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCC-----
Confidence 6432 22345679999999999875 589999999999999999999999965322 1222222211100
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCC
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFP 962 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 962 (995)
... ......+..+.+++.+||+.||++|||+.|++++ +++..
T Consensus 241 --~~~-~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~ 284 (486)
T 3mwu_A 241 --FDL-PQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYS 284 (486)
T ss_dssp --SCS-GGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTC
T ss_pred --CCC-cccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCHhhccCc
Confidence 000 0112345678899999999999999999999975 44443
No 215
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.2e-37 Score=347.02 Aligned_cols=265 Identities=16% Similarity=0.186 Sum_probs=195.0
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..++|+..+.||+|+||+||+|+. .+++.||||++...... .....+.+|++++++++||||+++++++.+++..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 356899999999999999999975 47889999998543222 2245577899999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE-----CCCCCeEEeeecccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL-----NSAFEAHVADFGLAK 836 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill-----~~~~~vkl~DfGla~ 836 (995)
|||+++ +|.+++... ..+++..++.++.||+.||.|||+.+ |+||||||+||++ +..+.+||+|||+++
T Consensus 112 ~e~~~~-~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 112 FEYAEN-DLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRR---CLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EECCSE-EHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EecCCC-CHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCC---EECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 999975 999999643 45899999999999999999999887 9999999999999 455569999999998
Q ss_pred ccccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.+... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.......................+.
T Consensus 186 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 186 AFGIP--IRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263 (329)
T ss_dssp HHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred ccCCc--ccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence 76432 1223445789999999998875 48999999999999999999999997543333333322222111111110
Q ss_pred hhc-----CCcC---CCC------CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 916 SIL-----DPRL---SMV------PKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 916 ~~~-----d~~~---~~~------~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
... .... ... +...+..+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 000 0000 000 0113467889999999999999999999986
No 216
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=3.8e-37 Score=342.09 Aligned_cols=256 Identities=23% Similarity=0.284 Sum_probs=201.0
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCC-------CChhHHHHHHHHHHhccCCCCceeEeEEEe
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT-------HSHDHGFRAEIQTLGNIRHRNIVRLLAFCS 753 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 753 (995)
..+.++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 446778999999999999999999764 578999999854221 112345789999999999999999999997
Q ss_pred cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC---eEEe
Q 001922 754 NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE---AHVA 830 (995)
Q Consensus 754 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~---vkl~ 830 (995)
..+ .|+||||+++++|.+++. ....+++..++.++.||+.||.|||+++ |+||||||+||+++.++. +||+
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~~~~kl~ 159 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV--GNKRLKEATCKLYFYQMLLAVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKIT 159 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS--TTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSSSCCEEEC
T ss_pred CCc-eEEEEecCCCCcHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEecCCCCCeEEEc
Confidence 654 899999999999999985 3457899999999999999999999887 999999999999987664 9999
Q ss_pred eeccccccccCCCCccccccccCcccccccccc---cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHh
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAY---TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRAT 907 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~ 907 (995)
|||+++..... .......||+.|+|||++. ...++.++||||+||++|+|++|+.||.................
T Consensus 160 Dfg~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 236 (322)
T 2ycf_A 160 DFGHSKILGET---SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGK 236 (322)
T ss_dssp CCTTCEECCCC---HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTC
T ss_pred cCccceecccc---cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCc
Confidence 99999875322 2223457899999999864 56788999999999999999999999976544433333222111
Q ss_pred cCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 908 NGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 908 ~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...... .....+..+.+++.+||+.||++||+++|+++.
T Consensus 237 ~~~~~~-----------~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~h 275 (322)
T 2ycf_A 237 YNFIPE-----------VWAEVSEKALDLVKKLLVVDPKARFTTEEALRH 275 (322)
T ss_dssp CCCCHH-----------HHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred cccCch-----------hhhhcCHHHHHHHHHHcccCHhhCCCHHHHhhC
Confidence 110000 011235678899999999999999999999863
No 217
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.7e-37 Score=343.80 Aligned_cols=268 Identities=25% Similarity=0.359 Sum_probs=208.5
Q ss_pred hhccCCCeeeccCceEEEEEEe-----CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC--cc
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-----PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE--TN 758 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~ 758 (995)
++|+..+.||+|+||.||+|++ .+++.||||++.. ......+.+.+|++++++++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH-STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESS-CCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEecc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4678889999999999999983 4688999999854 23444567899999999999999999999986543 78
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dikp~NIli~~~~~~kL~Dfg~~~~~ 195 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKR---YIHRDLATRNILVENENRVKIGDFGLTKVL 195 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCC---EeccCCCcceEEEcCCCcEEEecCcchhhc
Confidence 9999999999999999743 356899999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCCC-ccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh-----h
Q 001922 839 IDGGAS-ECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK-----E 912 (995)
Q Consensus 839 ~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~-----~ 912 (995)
...... .......++..|+|||++.+..++.++||||+|+++|||++|..||... ...+......... .
T Consensus 196 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 270 (326)
T 2w1i_A 196 PQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSP-----PAEFMRMIGNDKQGQMIVF 270 (326)
T ss_dssp CSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSH-----HHHHHHHHCTTCCTHHHHH
T ss_pred cccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCC-----HHHHHHhhccccchhhhHH
Confidence 443221 1123345778899999999888999999999999999999999998531 0111111110000 0
Q ss_pred hhhhhcC-CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 913 EFLSILD-PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 913 ~~~~~~d-~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
.+...+. ......+..++..+.+++.+||+.||++||+++|+++.|+++.+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~ 322 (326)
T 2w1i_A 271 HLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 322 (326)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 0011111 11112334566789999999999999999999999999988753
No 218
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=2.3e-37 Score=363.79 Aligned_cols=253 Identities=27% Similarity=0.330 Sum_probs=206.2
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCC--CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT--HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
+.++|+..+.||+|+||+||+|+.. +++.||||++..... ....+.+.+|+.++++++||||+++++++.+.+..|+
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 4678999999999999999999875 789999999854322 3446779999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeeccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKF 837 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~ 837 (995)
||||+.+|+|.+++.. ...+++..++.++.||+.||.|||+++ |+||||||+||++ +.++.+||+|||+++.
T Consensus 104 v~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~ 178 (484)
T 3nyv_A 104 VGEVYTGGELFDEIIS--RKRFSEVDAARIIRQVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLSTH 178 (484)
T ss_dssp EECCCCSCBHHHHHHT--CSCCBHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESSSSTTCCEEECCTTHHHH
T ss_pred EEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEecCCCCCcEEEEeeeeeEE
Confidence 9999999999999964 356899999999999999999999887 9999999999999 5678999999999987
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
+.... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... ......+......
T Consensus 179 ~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~----- 245 (484)
T 3nyv_A 179 FEASK---KMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE----YDILKKVEKGKYT----- 245 (484)
T ss_dssp BCCCC---SHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHCCCC-----
T ss_pred ccccc---ccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHcCCCC-----
Confidence 64332 2345679999999998866 689999999999999999999999965322 1222222211100
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
... ......+..+.+++.+||+.||++|||++|++++
T Consensus 246 --~~~-~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 282 (484)
T 3nyv_A 246 --FEL-PQWKKVSESAKDLIRKMLTYVPSMRISARDALDH 282 (484)
T ss_dssp --CCS-GGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred --CCC-cccccCCHHHHHHHHHHCCCChhHCcCHHHHhhC
Confidence 000 0112345678899999999999999999999864
No 219
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=2.2e-37 Score=341.11 Aligned_cols=253 Identities=24% Similarity=0.282 Sum_probs=203.8
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
.+.++|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 84 (304)
T 2jam_A 6 NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP-AFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLV 84 (304)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred chhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc-ccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEE
Confidence 45678999999999999999999874 68999999985432 22345688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeecccccc
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKFL 838 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~~ 838 (995)
|||+++++|.+++.. ...+++..+..++.|++.||.|||+.+ |+||||||+||++ +.++.+||+|||+++..
T Consensus 85 ~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~ 159 (304)
T 2jam_A 85 MQLVSGGELFDRILE--RGVYTEKDASLVIQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKME 159 (304)
T ss_dssp ECCCCSCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCC
T ss_pred EEcCCCccHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEecCCCCCCEEEccCCcceec
Confidence 999999999999863 346889999999999999999999887 9999999999999 78899999999998754
Q ss_pred ccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 839 IDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
.. .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+......
T Consensus 160 ~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~------ 225 (304)
T 2jam_A 160 QN----GIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE----SKLFEKIKEGYYE------ 225 (304)
T ss_dssp CC----BTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH----HHHHHHHHHCCCC------
T ss_pred CC----CccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH----HHHHHHHHcCCCC------
Confidence 22 122345689999999999999999999999999999999999999965321 1122222111100
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.........+..+.+++.+|++.||++||+++|+++.
T Consensus 226 --~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (304)
T 2jam_A 226 --FESPFWDDISESAKDFICHLLEKDPNERYTCEKALSH 262 (304)
T ss_dssp --CCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred --CCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 0011122345678999999999999999999999863
No 220
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.7e-37 Score=362.45 Aligned_cols=254 Identities=28% Similarity=0.362 Sum_probs=200.6
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.+.++|+..+.||+|+||+||+|+.. +++.||+|++.... .......+.+|+.++++++||||+++++++.+....|+
T Consensus 34 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 113 (494)
T 3lij_A 34 HLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYL 113 (494)
T ss_dssp CHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred chhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 45678999999999999999999874 68899999985432 23345678999999999999999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CCeEEeeeccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA---FEAHVADFGLAKF 837 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~---~~vkl~DfGla~~ 837 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.. +.+||+|||+++.
T Consensus 114 v~e~~~~g~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 114 VMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 9999999999998863 346899999999999999999999887 9999999999999764 4599999999987
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
+... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+...... .
T Consensus 189 ~~~~---~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i~~~~~~----~ 256 (494)
T 3lij_A 189 FENQ---KKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTD----QEILRKVEKGKYT----F 256 (494)
T ss_dssp CBTT---BCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHTCCC----C
T ss_pred CCCC---ccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHHhCCCC----C
Confidence 6432 2234567999999999876 4689999999999999999999999965322 2222222211100 0
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+.. ...+..+.+++.+||+.||++|||++|++++
T Consensus 257 ~~~~~----~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h 292 (494)
T 3lij_A 257 DSPEW----KNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292 (494)
T ss_dssp CSGGG----TTSCHHHHHHHHHHTCSSTTTSCCHHHHHTC
T ss_pred Cchhc----ccCCHHHHHHHHHHCCCChhhCccHHHHhcC
Confidence 01111 1234568899999999999999999999853
No 221
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=1.5e-37 Score=337.22 Aligned_cols=248 Identities=26% Similarity=0.386 Sum_probs=196.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 56888999999999999999875 78999999984321 1223457889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.+++.. ...+++..+..++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++.......
T Consensus 91 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 91 EYVSGGELFDYICK--HGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp ECCCSCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHC---SSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred eccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 99999999999964 345889999999999999999999888 9999999999999999999999999998764322
Q ss_pred CCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
......|++.|+|||++.+..+ +.++||||+|+++|+|++|+.||.... .......+...
T Consensus 166 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~----~~~~~~~~~~~------------ 226 (276)
T 2h6d_A 166 ---FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----VPTLFKKIRGG------------ 226 (276)
T ss_dssp --------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHC------------
T ss_pred ---ceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCc----HHHHHHHhhcC------------
Confidence 2234578999999999988765 689999999999999999999996422 12222222111
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
....+...+..+.+++.+||+.||++||+++|+++.
T Consensus 227 ~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 227 VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 111223345678899999999999999999999974
No 222
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.8e-37 Score=348.88 Aligned_cols=261 Identities=19% Similarity=0.281 Sum_probs=206.7
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCCh----------------hHHHHHHHHHHhccCCCCceeE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSH----------------DHGFRAEIQTLGNIRHRNIVRL 748 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~hpniv~~ 748 (995)
.++|+..+.||+|+||.||+|+. +++.||+|++........ .+.+.+|++++++++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35789999999999999999988 899999999843211111 1779999999999999999999
Q ss_pred eEEEecCCcceEEEEeccCCChhhh------hcCCCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCEEE
Q 001922 749 LAFCSNKETNLLVYEYMRNGSLGEA------LHGKKGAFLGWNLRYKIAIEAAKGLCYLHH-DCSPLIVHRDVKSNNILL 821 (995)
Q Consensus 749 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~~~~iiHrDlkp~Nill 821 (995)
++++.+.+..++||||+++|+|.++ +.......+++..++.++.|++.||.|||+ .+ |+||||||+||++
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dl~p~Nil~ 185 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKN---ICHRDVKPSNILM 185 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSC---EECCCCCGGGEEE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCC---EeecCCChHhEEE
Confidence 9999999999999999999999999 654446789999999999999999999998 77 9999999999999
Q ss_pred CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccC-CCCc-ccchhhHHHHHHHHHhCCCCCCCCCCCchH
Q 001922 822 NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDE-KSDVYSFGVVLLELLTGRRPVGDFGDGVDI 899 (995)
Q Consensus 822 ~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~-~~DvwSlGvil~elltg~~Pf~~~~~~~~~ 899 (995)
+.++.+||+|||.+...... ......|++.|+|||++.+. .++. ++||||+|+++|||++|+.||.........
T Consensus 186 ~~~~~~kl~dfg~~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~ 261 (348)
T 2pml_X 186 DKNGRVKLSDFGESEYMVDK----KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVEL 261 (348)
T ss_dssp CTTSCEEECCCTTCEECBTT----EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHH
T ss_pred cCCCcEEEeccccccccccc----cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence 99999999999999875332 33456799999999999877 6666 999999999999999999999764443222
Q ss_pred HHHHHHHhcCChhhh-------hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 900 VQWSKRATNGRKEEF-------LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 900 ~~~~~~~~~~~~~~~-------~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.. .+........ ...............+..+.+++.+||+.||++||+++|+++
T Consensus 262 ~~---~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 262 FN---NIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HH---HHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred HH---HHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22 2221110000 000000000011345667899999999999999999999987
No 223
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=4.2e-37 Score=342.50 Aligned_cols=272 Identities=20% Similarity=0.254 Sum_probs=207.8
Q ss_pred HhhccCCCeeeccCceEEEEEEe--CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhcc---CCCCceeEeEEEe-----
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM--PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNI---RHRNIVRLLAFCS----- 753 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l---~hpniv~~~~~~~----- 753 (995)
.++|+..+.||+|+||.||+|+. .+++.||+|++.... .......+.+|+.+++.+ +||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~ 89 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD 89 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence 46789999999999999999987 467889999884322 222234567788877776 8999999999986
Q ss_pred cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeec
Q 001922 754 NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFG 833 (995)
Q Consensus 754 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfG 833 (995)
.....++||||++ |+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||
T Consensus 90 ~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~g---i~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 90 RETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHHHeEEcCCCCEEEecCc
Confidence 5567899999997 69999998665566899999999999999999999887 9999999999999999999999999
Q ss_pred cccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
+++.... ........||+.|+|||++.+..++.++||||+|+++|+|++|+.||.......................
T Consensus 166 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 166 LARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242 (326)
T ss_dssp SCCCCCG---GGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGG
T ss_pred ccccccC---CCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCccc
Confidence 9986532 1223456789999999999999999999999999999999999999975433222222222221111111
Q ss_pred hhhhc-----------CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCCC
Q 001922 914 FLSIL-----------DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFPR 963 (995)
Q Consensus 914 ~~~~~-----------d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~~ 963 (995)
+.... ...........+..+.+++.+||+.||++||+++|+++. ++++..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~ 305 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER 305 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence 11000 000111223455678899999999999999999999953 554443
No 224
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=5.9e-37 Score=354.10 Aligned_cols=273 Identities=20% Similarity=0.231 Sum_probs=199.7
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecC-----Cc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK-----ET 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~ 757 (995)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ......++.+|++++++++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 46799999999999999999976 458889999995432 223456788999999999999999999999765 56
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||++ |+|.+++.. ...+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++.
T Consensus 105 ~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~g---ivHrDlkp~NILl~~~~~~kL~DFGla~~ 178 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLART 178 (432)
T ss_dssp EEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CCCCCCCHHHeEECCCCCEEEccCCCccc
Confidence 899999996 599999963 456899999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCCC--------------------ccccccccCccccccccc-ccCCCCcccchhhHHHHHHHHHhCCCCCCCC---
Q 001922 838 LIDGGAS--------------------ECMSAIAGSYGYIAPEYA-YTLRVDEKSDVYSFGVVLLELLTGRRPVGDF--- 893 (995)
Q Consensus 838 ~~~~~~~--------------------~~~~~~~gt~~y~aPE~~-~~~~~~~~~DvwSlGvil~elltg~~Pf~~~--- 893 (995)
....... ......+||+.|+|||++ ....++.++||||+||++|||++|..||...
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~ 258 (432)
T 3n9x_A 179 INSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258 (432)
T ss_dssp C-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGG
T ss_pred ccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccccccccccc
Confidence 6433211 123567899999999985 5667999999999999999999865555321
Q ss_pred -------CCC-----------------chHHHHHHHHhcC-Chhhh--------hhh---cCCcCCC----CCHHHHHHH
Q 001922 894 -------GDG-----------------VDIVQWSKRATNG-RKEEF--------LSI---LDPRLSM----VPKEEAMHL 933 (995)
Q Consensus 894 -------~~~-----------------~~~~~~~~~~~~~-~~~~~--------~~~---~d~~~~~----~~~~~~~~l 933 (995)
.+. .+........... ....+ ... ....... ..+..+..+
T Consensus 259 ~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 338 (432)
T 3n9x_A 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDG 338 (432)
T ss_dssp CCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHH
T ss_pred ccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHH
Confidence 000 0011111111111 00000 000 0000000 002245678
Q ss_pred HHHHhcccCCCCCCCCCHHHHHHH--HccCCC
Q 001922 934 LFVAMLCIQENSIERPRMREVVQM--LSEFPR 963 (995)
Q Consensus 934 ~~li~~cl~~dP~~RPt~~evl~~--L~~~~~ 963 (995)
.+++.+||+.||++|||++|++++ ++++..
T Consensus 339 ~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~ 370 (432)
T 3n9x_A 339 INLLESMLKFNPNKRITIDQALDHPYLKDVRK 370 (432)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred HHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence 899999999999999999999974 555544
No 225
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-37 Score=350.83 Aligned_cols=261 Identities=23% Similarity=0.281 Sum_probs=200.3
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec--------
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN-------- 754 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 754 (995)
..++|+..+.||+|+||+||+|+. .+|+.||||++...... ..+|+++++.++||||+++++++..
T Consensus 5 ~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~-----~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 5 SSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY-----KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp -CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS-----CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred ccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch-----HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 346789999999999999999976 57899999998543222 3469999999999999999999843
Q ss_pred ------------------------------CCcceEEEEeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001922 755 ------------------------------KETNLLVYEYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLH 802 (995)
Q Consensus 755 ------------------------------~~~~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH 802 (995)
..+.++||||+++ +|.+.+.. ..+..+++..++.++.||+.||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3347899999984 88777753 34567999999999999999999999
Q ss_pred hcCCCCeEecCCCCCCEEEC-CCCCeEEeeeccccccccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHH
Q 001922 803 HDCSPLIVHRDVKSNNILLN-SAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVL 880 (995)
Q Consensus 803 ~~~~~~iiHrDlkp~Nill~-~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil 880 (995)
+.+ |+||||||+||+++ .++.+||+|||+++.+.... ......+|+.|+|||++.+. .++.++||||+||++
T Consensus 159 ~~g---i~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 232 (383)
T 3eb0_A 159 SLG---ICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---PSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232 (383)
T ss_dssp TTT---EECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---CCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHH
T ss_pred HCc---CccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---CCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHH
Confidence 777 99999999999997 68899999999998764332 22345789999999998765 489999999999999
Q ss_pred HHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC--------C------CCCHHHHHHHHHHHhcccCCCCC
Q 001922 881 LELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL--------S------MVPKEEAMHLLFVAMLCIQENSI 946 (995)
Q Consensus 881 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--------~------~~~~~~~~~l~~li~~cl~~dP~ 946 (995)
|||++|+.||.....................+.+.. .++.. . ..+...+..+.+++.+||+.||+
T Consensus 233 ~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 311 (383)
T 3eb0_A 233 GELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIR-MNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPD 311 (383)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH-HCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH-hCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChh
Confidence 999999999976544333444433333222221111 11111 0 02233556789999999999999
Q ss_pred CCCCHHHHHHH
Q 001922 947 ERPRMREVVQM 957 (995)
Q Consensus 947 ~RPt~~evl~~ 957 (995)
+|||+.|++++
T Consensus 312 ~R~t~~e~l~h 322 (383)
T 3eb0_A 312 LRINPYEAMAH 322 (383)
T ss_dssp GSCCHHHHHTS
T ss_pred hCCCHHHHhcC
Confidence 99999999853
No 226
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.2e-37 Score=337.42 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=203.0
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888999999999999999775 57889999984321 1223467889999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++|+|.+++.. ...+++..++.++.|++.|+.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~- 167 (284)
T 2vgo_A 94 EFAPRGELYKELQK--HGRFDEQRSATFMEELADALHYCHERK---VIHRDIKPENLLMGYKGELKIADFGWSVHAPSL- 167 (284)
T ss_dssp CCCTTEEHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCSGGGEEECTTCCEEECCCTTCEECSSS-
T ss_pred EeCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCHHHEEEcCCCCEEEecccccccCccc-
Confidence 99999999999964 346899999999999999999999777 999999999999999999999999998765321
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRL 922 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 922 (995)
......|++.|+|||++.+..++.++||||+|+++|+|++|+.||..... ......+... +.
T Consensus 168 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~---------~~-- 229 (284)
T 2vgo_A 168 ---RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH----TETHRRIVNV---------DL-- 229 (284)
T ss_dssp ---CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTT---------CC--
T ss_pred ---ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCH----hHHHHHHhcc---------cc--
Confidence 22345789999999999999999999999999999999999999964321 1111111111 11
Q ss_pred CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 923 SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 923 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
..+...+..+.+++.+|++.||++||+++|+++
T Consensus 230 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 230 -KFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp -CCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred -CCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 122334567889999999999999999999986
No 227
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=6.5e-38 Score=340.75 Aligned_cols=261 Identities=22% Similarity=0.326 Sum_probs=205.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEe--cCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCS--NKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~~l 760 (995)
.++|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|++++++++||||+++++++. .....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 457888999999999999999774 68999999985433 2234566889999999999999999999874 4667899
Q ss_pred EEEeccCCChhhhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 761 VYEYMRNGSLGEALHGK--KGAFLGWNLRYKIAIEAAKGLCYLHHDC--SPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~~~--~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
||||+++++|.+++... ....+++..++.++.|++.||+|||+.+ ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999999999642 2345899999999999999999999764 2349999999999999999999999999998
Q ss_pred ccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
...... .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||.... .......+...
T Consensus 165 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~i~~~------- 231 (279)
T 2w5a_A 165 ILNHDT--SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFS----QKELAGKIREG------- 231 (279)
T ss_dssp HC---C--HHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSS----HHHHHHHHHHT-------
T ss_pred eecccc--ccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccC----HHHHHHHHhhc-------
Confidence 754321 12234578999999999999899999999999999999999999996532 11222222211
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
.....+...+..+.+++.+||+.||++||+++|+++.+....
T Consensus 232 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 273 (279)
T 2w5a_A 232 ----KFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273 (279)
T ss_dssp ----CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred ----ccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence 111233345677999999999999999999999998765543
No 228
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=4.6e-37 Score=345.80 Aligned_cols=268 Identities=19% Similarity=0.245 Sum_probs=202.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEec--------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN-------- 754 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 754 (995)
..+|+..+.||+|+||+||+|+. .+|+.||+|++..... ......+.+|++++++++||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 46899999999999999999987 5789999999854332 3335568899999999999999999999876
Q ss_pred CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecc
Q 001922 755 KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGL 834 (995)
Q Consensus 755 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGl 834 (995)
.+..++||||+++ ++.+.+.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+
T Consensus 96 ~~~~~lv~e~~~~-~l~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~ 170 (351)
T 3mi9_A 96 KGSIYLVFDFCEH-DLAGLLSN-VLVKFTLSEIKRVMQMLLNGLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGL 170 (351)
T ss_dssp -CEEEEEEECCSE-EHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTSCEEECCCTT
T ss_pred CceEEEEEeccCC-CHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCCEEEccchh
Confidence 3467999999975 77777763 3356899999999999999999999887 99999999999999999999999999
Q ss_pred ccccccCC--CCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 835 AKFLIDGG--ASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 835 a~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
++.+.... .........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.....................
T Consensus 171 a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 250 (351)
T 3mi9_A 171 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITP 250 (351)
T ss_dssp CEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCT
T ss_pred cccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 98764322 1222345678999999998876 45899999999999999999999999754332222222222111111
Q ss_pred hhhhhhcC-----------CcCCCCCH-----HHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 912 EEFLSILD-----------PRLSMVPK-----EEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 912 ~~~~~~~d-----------~~~~~~~~-----~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...-. ........ ..+..+.+++.+||+.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 312 (351)
T ss_dssp TTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence 11100000 00000000 013558899999999999999999999975
No 229
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=7.7e-37 Score=335.13 Aligned_cols=251 Identities=26% Similarity=0.376 Sum_probs=198.5
Q ss_pred hccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEec
Q 001922 687 CVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
.|.....||+|+||.||+|+. .+++.||+|++... .....+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER-DSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC-CC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC-chHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 345556899999999999986 56889999998543 3334567899999999999999999999999999999999999
Q ss_pred cCCChhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-CCCeEEeeeccccccccCCC
Q 001922 766 RNGSLGEALHGKK-GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS-AFEAHVADFGLAKFLIDGGA 843 (995)
Q Consensus 766 ~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~-~~~vkl~DfGla~~~~~~~~ 843 (995)
++++|.+++.... ....++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+++......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~- 177 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN- 177 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCC---EEccCCChhhEEEECCCCCEEEeecccccccCCCC-
Confidence 9999999997542 335678889999999999999999887 999999999999987 8999999999998764321
Q ss_pred CccccccccCcccccccccccCC--CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 844 SECMSAIAGSYGYIAPEYAYTLR--VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 844 ~~~~~~~~gt~~y~aPE~~~~~~--~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
.......|++.|+|||++.+.. ++.++||||||+++|+|++|+.||......... ....... ..
T Consensus 178 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~--~~~~~~~-----------~~ 243 (295)
T 2clq_A 178 -PCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAA--MFKVGMF-----------KV 243 (295)
T ss_dssp ----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHH--HHHHHHH-----------CC
T ss_pred -CcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHH--HHhhccc-----------cc
Confidence 2223457899999999987654 789999999999999999999999653322111 1110000 01
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
....+...+..+.+++.+||+.||++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 244 HPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp CCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 11233445667899999999999999999999986
No 230
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=4.1e-37 Score=337.16 Aligned_cols=250 Identities=23% Similarity=0.290 Sum_probs=205.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..+|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 457888999999999999999875 57889999985432 223456688999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. ...+++..++.++.|++.|++|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 94 ~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 94 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EECCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 999999999998863 346899999999999999999999887 999999999999999999999999999876432
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
. .......||+.|+|||++.+..++.++||||+|+++|+|++|+.||..... .+....+... .
T Consensus 169 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~-----------~ 231 (294)
T 2rku_A 169 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKN-----------E 231 (294)
T ss_dssp T--CCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHTT-----------C
T ss_pred c--cccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHHhhc-----------c
Confidence 2 222446789999999999998899999999999999999999999965321 1111111111 1
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 232 -~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 232 -YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -CCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11223345678899999999999999999999874
No 231
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=2.8e-37 Score=346.00 Aligned_cols=251 Identities=25% Similarity=0.378 Sum_probs=199.6
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHH-HhccCCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQT-LGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||+||+|+. .+|+.||||++..........++..|..+ ++.++||||+++++++.+.+..|+|||
T Consensus 51 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 130 (340)
T 3an0_A 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 130 (340)
T ss_dssp SCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEEC
T ss_pred hheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHH
Confidence 4677888999999999999986 57899999999654444444556666665 778899999999999999999999999
Q ss_pred eccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 764 YMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 764 ~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
|+++ +|.+++.. ..+..+++..++.++.||+.||+|||++ + |+||||||+||+++.++.+||+|||+++.+..
T Consensus 131 ~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 206 (340)
T 3an0_A 131 LMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLVD 206 (340)
T ss_dssp CCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHTC---CCCCSCCSTTEEECSTTCEEECCCSHHHHHSC
T ss_pred HhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeCCCceeccc
Confidence 9975 99888863 2456799999999999999999999976 7 99999999999999999999999999987632
Q ss_pred CCCCccccccccCcccccccccc----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 841 GGASECMSAIAGSYGYIAPEYAY----TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~----~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||........ .........
T Consensus 207 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~--~~~~~~~~~------- 274 (340)
T 3an0_A 207 S---VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQ--QLKQVVEEP------- 274 (340)
T ss_dssp H---HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHH--HHHHHHHSC-------
T ss_pred c---cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHH--HHHHHhcCC-------
Confidence 1 1223457999999999964 34789999999999999999999999975332211 111111111
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.........+..+.+++.+||+.||++||+++|+++
T Consensus 275 ----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 275 ----SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp ----CCCCCGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred ----CCCCCcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 011112234667999999999999999999999986
No 232
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=6.5e-37 Score=355.68 Aligned_cols=262 Identities=19% Similarity=0.245 Sum_probs=207.4
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCC-CCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRH-RNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h-pniv~~~~~~~~~~~~~lv~ 762 (995)
.++|++.+.||+|+||.||+|++ .+++.||||++..... ...+..|+++++.++| +++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 46789999999999999999986 5689999998743322 2347889999999986 55666666777788899999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---CCCCCeEEeeeccccccc
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL---NSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill---~~~~~vkl~DfGla~~~~ 839 (995)
||+ +++|.+++... ...+++..++.++.||+.||+|||+++ |+||||||+|||+ +.++.+||+|||+++.+.
T Consensus 83 e~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKS---FLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp ECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred ECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 999 89999999732 456899999999999999999999887 9999999999999 588999999999998765
Q ss_pred cCCCCc-----cccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 840 DGGASE-----CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 840 ~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
...... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...........+............
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 443221 123567999999999999999999999999999999999999999876544333222221111000000
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
.. ....++..+.+++.+||+.+|++||++++|++.|+++.
T Consensus 238 ~~--------l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~ 277 (483)
T 3sv0_A 238 EA--------LCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLF 277 (483)
T ss_dssp HH--------HHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HH--------HhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 00 01123467899999999999999999999999998864
No 233
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=1.4e-37 Score=346.89 Aligned_cols=265 Identities=23% Similarity=0.330 Sum_probs=201.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||.||+|+.. +++.||+|++...... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 103 (331)
T 4aaa_A 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVF 103 (331)
T ss_dssp GGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEE
Confidence 467899999999999999999875 5899999998543322 22455788999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.++... ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||+++.+....
T Consensus 104 e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 178 (331)
T 4aaa_A 104 EFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178 (331)
T ss_dssp ECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred ecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCC---EEccCcChheEEEcCCCcEEEEeCCCceeecCCc
Confidence 99999999988753 346899999999999999999999887 9999999999999999999999999998654322
Q ss_pred CCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh---------
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE--------- 912 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~--------- 912 (995)
.......||+.|+|||++.+. .++.++||||+||++|+|++|+.||....+.................
T Consensus 179 --~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 179 --EVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCG
T ss_pred --cccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhcc
Confidence 222445789999999998875 68999999999999999999999997644333332222221111000
Q ss_pred hhhhhcCCcCC-CC-----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 913 EFLSILDPRLS-MV-----PKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 913 ~~~~~~d~~~~-~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.+.....+... .. .+..+..+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00000001110 01 1134667999999999999999999999986
No 234
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=1.1e-37 Score=375.36 Aligned_cols=250 Identities=24% Similarity=0.348 Sum_probs=199.4
Q ss_pred CeeeccCceEEEEEEe---CCCcEEEEEEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEEeccC
Q 001922 692 NVIGRGGAGIVYHGKM---PNGVEIAVKKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYEYMRN 767 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~---~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 767 (995)
+.||+|+||+||+|.+ ..++.||||++..... ....+.+.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999954 3467899999854322 2335779999999999999999999999964 568899999999
Q ss_pred CChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCC-Ccc
Q 001922 768 GSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGA-SEC 846 (995)
Q Consensus 768 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~-~~~ 846 (995)
|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+||+++.++.+||+|||+++.+..... ...
T Consensus 454 g~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~yLH~~~---iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 528 (635)
T 4fl3_A 454 GPLNKYLQQ--NRHVKDKNIIELVHQVSMGMKYLEESN---FVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKA 528 (635)
T ss_dssp EEHHHHHHH--CTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeCCCCChHhEEEeCCCCEEEEEcCCccccccCcccccc
Confidence 999999963 456899999999999999999999887 99999999999999999999999999987644322 222
Q ss_pred ccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCC
Q 001922 847 MSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMV 925 (995)
Q Consensus 847 ~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 925 (995)
.....+|+.|+|||++.+..++.++|||||||++|||++ |+.||..... .+....+... .....
T Consensus 529 ~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~----~~~~~~i~~~-----------~~~~~ 593 (635)
T 4fl3_A 529 QTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG----SEVTAMLEKG-----------ERMGC 593 (635)
T ss_dssp ------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH----HHHHHHHHTT-----------CCCCC
T ss_pred ccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH----HHHHHHHHcC-----------CCCCC
Confidence 234457889999999999999999999999999999998 9999965322 1122222211 11223
Q ss_pred CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 926 PKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 926 ~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
+..++..+.++|.+||+.||++||++++|++.|+++.
T Consensus 594 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~ 630 (635)
T 4fl3_A 594 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY 630 (635)
T ss_dssp CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence 4456678999999999999999999999999998753
No 235
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3e-37 Score=337.55 Aligned_cols=252 Identities=25% Similarity=0.348 Sum_probs=188.2
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhH-HHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDH-GFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||+||+|+. .+++.||+|++.......... .+.++...++.++||||+++++++.+++..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 35788899999999999999986 578999999985443332223 3445555688889999999999999999999999
Q ss_pred EeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 763 EYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 763 e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
||+++ +|.+++.. ..+..+++..++.++.|++.||+|||++ + |+||||||+||+++.++.+||+|||+++...
T Consensus 86 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 86 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS---VIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp ECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSC---CCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred ehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 99975 88887753 2456799999999999999999999987 7 9999999999999999999999999998764
Q ss_pred cCCCCccccccccCccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 840 DGGASECMSAIAGSYGYIAPEYA----YTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
... ......||+.|+|||++ .+..++.++||||+|+++|+|++|+.||....... ..........
T Consensus 162 ~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~------ 230 (290)
T 3fme_A 162 DDV---AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPF--QQLKQVVEEP------ 230 (290)
T ss_dssp -----------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHH--HHHHHHHHSC------
T ss_pred ccc---cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchH--HHHHHHhccC------
Confidence 322 22345799999999996 56678999999999999999999999996533221 1111111111
Q ss_pred hhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 916 SILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 916 ~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.....+...+..+.+++.+||+.||++|||++|+++
T Consensus 231 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 231 -----SPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp -----CCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -----CCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 111112234567899999999999999999999986
No 236
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=7.6e-38 Score=344.54 Aligned_cols=264 Identities=27% Similarity=0.375 Sum_probs=187.1
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||.||+|.. .+++.||||++.........+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 35688889999999999999976 46889999988544334445678899999999999999999999999999999999
Q ss_pred eccCCChhhhhcC------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 764 YMRNGSLGEALHG------KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 764 ~~~~gsL~~~l~~------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
|+++++|.+++.. .....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNG---QIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---CCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 9999999999863 23456899999999999999999999887 99999999999999999999999999987
Q ss_pred cccCCC---CccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 838 LIDGGA---SECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 838 ~~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
...... ........||+.|+|||++.+ ..++.++||||+|+++|||++|+.||.......... ..........
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~~~ 247 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLM---LTLQNDPPSL 247 (303)
T ss_dssp CC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHH---HHHTSSCCCT
T ss_pred eccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHH---HHhccCCCcc
Confidence 643221 111234578999999999876 568999999999999999999999997643322211 1111110000
Q ss_pred hhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 914 FLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 914 ~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....++ ......+..+.+++.+||+.||++||+++|+++.
T Consensus 248 ~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 288 (303)
T 2vwi_A 248 ETGVQDK---EMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRH 288 (303)
T ss_dssp TC--------CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred ccccccc---hhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 0000011 1112334578899999999999999999999873
No 237
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=2.1e-37 Score=350.26 Aligned_cols=269 Identities=20% Similarity=0.222 Sum_probs=199.3
Q ss_pred HHHHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCCh----------hHHHHHHHHHHhccCCCCceeEeE
Q 001922 681 VSDILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSH----------DHGFRAEIQTLGNIRHRNIVRLLA 750 (995)
Q Consensus 681 ~~~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~hpniv~~~~ 750 (995)
...+.++|+..+.||+|+||.||+|...+|+.||||++........ .+.+.+|++++++++||||+++++
T Consensus 17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 96 (362)
T 3pg1_A 17 LHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRD 96 (362)
T ss_dssp HHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSE
T ss_pred HHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceee
Confidence 4455678999999999999999999988899999999854322211 267899999999999999999999
Q ss_pred EEec-----CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC
Q 001922 751 FCSN-----KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF 825 (995)
Q Consensus 751 ~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~ 825 (995)
++.. ....|+||||++ |+|.+++.. ....+++..+..++.||+.||.|||+.+ |+||||||+||+++.++
T Consensus 97 ~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~NIl~~~~~ 171 (362)
T 3pg1_A 97 IFVHFEEPAMHKLYLVTELMR-TDLAQVIHD-QRIVISPQHIQYFMYHILLGLHVLHEAG---VVHRDLHPGNILLADNN 171 (362)
T ss_dssp EEEECCTTTCCEEEEEEECCS-EEHHHHHHC-TTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTC
T ss_pred eEEeccCCCcceEEEEEccCC-CCHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHHCc---CEecCCChHHEEEcCCC
Confidence 9843 346799999997 588888873 3457899999999999999999999887 99999999999999999
Q ss_pred CeEEeeeccccccccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHH
Q 001922 826 EAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSK 904 (995)
Q Consensus 826 ~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~ 904 (995)
.+||+|||+++..... .......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||..............
T Consensus 172 ~~kl~Dfg~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~ 248 (362)
T 3pg1_A 172 DITICDFNLAREDTAD---ANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVE 248 (362)
T ss_dssp CEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred CEEEEecCcccccccc---cccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence 9999999999754322 22244578999999999876 6789999999999999999999999975433222222222
Q ss_pred HHhcCChhh--------hhhhcCCcCC--------CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 905 RATNGRKEE--------FLSILDPRLS--------MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 905 ~~~~~~~~~--------~~~~~d~~~~--------~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
......... ..+....... ......+..+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 317 (362)
T 3pg1_A 249 VVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRH 317 (362)
T ss_dssp HHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred HcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcC
Confidence 222111111 1111111111 0112235668899999999999999999999874
No 238
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=5.3e-37 Score=346.90 Aligned_cols=266 Identities=22% Similarity=0.272 Sum_probs=206.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecC-----Ccc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK-----ETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~ 758 (995)
..+|+..+.||+|+||.||+|+.. +++.||||++...........+.+|++++++++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457899999999999999999764 68889999996544444456788999999999999999999999654 367
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
|+||||++ |+|.+++.. ..+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++..
T Consensus 106 ~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~ 178 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVA 178 (364)
T ss_dssp EEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChHhEEECCCCCEEEEeCcceEec
Confidence 99999997 499999864 35899999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCC-CccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 839 IDGGA-SECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 839 ~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
..... ........||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.......................+..
T Consensus 179 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 258 (364)
T 3qyz_A 179 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC 258 (364)
T ss_dssp CGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHT
T ss_pred CCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 43221 112245589999999998654 4589999999999999999999999976544444444333222222111111
Q ss_pred hcC----------CcCCCC-----CHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 917 ILD----------PRLSMV-----PKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 917 ~~d----------~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+ +..... ....+..+.+++.+||+.||++|||++|+++.
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 314 (364)
T 3qyz_A 259 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314 (364)
T ss_dssp CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred hhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 100 000001 12235678899999999999999999999974
No 239
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.5e-37 Score=345.28 Aligned_cols=250 Identities=23% Similarity=0.290 Sum_probs=205.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..+|+..+.||+|+||.||+|+.. +++.||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 457888999999999999999875 57889999985432 223456788999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++.....
T Consensus 120 ~e~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 120 LELCRRRSLLELHKR--RKALTEPEARYYLRQIVLGCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp ECCCTTCBHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EecCCCCCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---CEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 999999999999863 346899999999999999999999887 999999999999999999999999999876432
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
. .......||+.|+|||++.+..++.++||||||+++|||++|+.||..... ......+....
T Consensus 195 ~--~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~----~~~~~~~~~~~----------- 257 (335)
T 2owb_A 195 G--ERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCL----KETYLRIKKNE----------- 257 (335)
T ss_dssp T--CCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSH----HHHHHHHHHTC-----------
T ss_pred c--ccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCH----HHHHHHHhcCC-----------
Confidence 2 222456799999999999998999999999999999999999999964321 11111111110
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 258 -~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 258 -YSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp -CCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred -CCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 01222345678899999999999999999999863
No 240
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=6.4e-37 Score=361.41 Aligned_cols=259 Identities=27% Similarity=0.340 Sum_probs=203.9
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC------------ChhHHHHHHHHHHhccCCCCceeEe
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH------------SHDHGFRAEIQTLGNIRHRNIVRLL 749 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~hpniv~~~ 749 (995)
.+.++|+..+.||+|+||+||+|+.. +++.||+|++...... ...+.+.+|+.++++++||||++++
T Consensus 33 ~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~ 112 (504)
T 3q5i_A 33 KIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF 112 (504)
T ss_dssp CGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEE
T ss_pred CcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 35678999999999999999999864 5789999998543211 2356788999999999999999999
Q ss_pred EEEecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC---C
Q 001922 750 AFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF---E 826 (995)
Q Consensus 750 ~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~---~ 826 (995)
+++.++...|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||+.+ |+||||||+||+++.++ .
T Consensus 113 ~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 113 DVFEDKKYFYLVTEFYEGGELFEQIIN--RHKFDECDAANIMKQILSGICYLHKHN---IVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EEEECSSEEEEEEECCTTCBHHHHHHH--HSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESSTTCCSS
T ss_pred EEEEcCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999999864 346899999999999999999999887 99999999999998876 6
Q ss_pred eEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 827 AHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 827 vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
+||+|||+++.+... .......||+.|+|||++. ..++.++||||+||++|+|++|+.||..... ......+
T Consensus 188 ~kl~Dfg~a~~~~~~---~~~~~~~gt~~y~aPE~~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~----~~~~~~i 259 (504)
T 3q5i_A 188 IKIVDFGLSSFFSKD---YKLRDRLGTAYYIAPEVLK-KKYNEKCDVWSCGVIMYILLCGYPPFGGQND----QDIIKKV 259 (504)
T ss_dssp EEECCCTTCEECCTT---SCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH
T ss_pred EEEEECCCCEEcCCC---CccccccCCcCCCCHHHhc-cCCCchHHHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHH
Confidence 999999999876432 2234567999999999886 4689999999999999999999999965322 2222222
Q ss_pred hcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCC
Q 001922 907 TNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFP 962 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 962 (995)
......... +. ....+..+.+++.+||+.||++|||++|+++. +++..
T Consensus 260 ~~~~~~~~~----~~----~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 260 EKGKYYFDF----ND----WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp HHCCCCCCH----HH----HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTC
T ss_pred HcCCCCCCc----cc----cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhch
Confidence 221100000 00 01234678999999999999999999999864 44443
No 241
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=4.7e-37 Score=350.45 Aligned_cols=267 Identities=24% Similarity=0.306 Sum_probs=201.0
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCC------cce
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE------TNL 759 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------~~~ 759 (995)
.+|+..+.||+|+||+||+|+...+..||+|++...... ..+|+++++.++||||+++++++.... ..+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~~-----~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRF-----KNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTS-----CCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcch-----HHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 468899999999999999999888788999998543222 236999999999999999999985433 378
Q ss_pred EEEEeccCCChhhhhc-CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCCeEEeeeccccc
Q 001922 760 LVYEYMRNGSLGEALH-GKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-SAFEAHVADFGLAKF 837 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~-~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-~~~~vkl~DfGla~~ 837 (995)
+||||++++.+..... ......+++..++.++.||+.||+|||+++ |+||||||+||+++ .++.+||+|||+++.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIG---ICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 9999998744333322 123457899999999999999999999887 99999999999999 799999999999987
Q ss_pred cccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||.............+.........+..
T Consensus 192 ~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~ 268 (394)
T 4e7w_A 192 LIAGEP---NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKT 268 (394)
T ss_dssp CCTTCC---CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHH
T ss_pred ccCCCC---CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 643322 2345789999999998765 589999999999999999999999976543333433333322222111111
Q ss_pred h----cCCcC---CC------CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCCC
Q 001922 917 I----LDPRL---SM------VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFPR 963 (995)
Q Consensus 917 ~----~d~~~---~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~~ 963 (995)
. ..... .. .+...+..+.+++.+||+.||++|||+.|++++ ++++..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 330 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDELRT 330 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGSTTTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcChhhhhhcc
Confidence 1 00001 00 112245678999999999999999999999975 555443
No 242
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=5.4e-37 Score=335.50 Aligned_cols=251 Identities=29% Similarity=0.417 Sum_probs=198.0
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEec----CCcce
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN----KETNL 759 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~~~ 759 (995)
..|+..+.||+|+||+||+|.. .++..||+|++.... .....+.+.+|+.++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3477788999999999999976 467889999985432 23345678899999999999999999998865 35689
Q ss_pred EEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCCeEEeeecccccc
Q 001922 760 LVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-SAFEAHVADFGLAKFL 838 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-~~~~vkl~DfGla~~~ 838 (995)
+||||+++|+|.+++.. ...+++..++.++.|++.||.|||+.+ .+|+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~-~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKR--FKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHcCC-CCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 99999999999999964 356889999999999999999999542 2399999999999998 7899999999999754
Q ss_pred ccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhc
Q 001922 839 IDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSIL 918 (995)
Q Consensus 839 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 918 (995)
... ......||+.|+|||++. +.++.++||||+|+++|+|++|+.||....+... ............
T Consensus 183 ~~~----~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~---~~~~~~~~~~~~----- 249 (290)
T 1t4h_A 183 RAS----FAKAVIGTPEFMAPEMYE-EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ---IYRRVTSGVKPA----- 249 (290)
T ss_dssp CTT----SBEESCSSCCCCCGGGGG-TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH---HHHHHTTTCCCG-----
T ss_pred ccc----ccccccCCcCcCCHHHHh-ccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHH---HHHHHhccCCcc-----
Confidence 322 223457999999999876 4589999999999999999999999965433222 222222211100
Q ss_pred CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 919 DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 919 d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+...+..+.+++.+||+.||++||+++|+++.
T Consensus 250 -----~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 283 (290)
T 1t4h_A 250 -----SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp -----GGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred -----ccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 0112233568899999999999999999999863
No 243
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.2e-36 Score=350.76 Aligned_cols=262 Identities=21% Similarity=0.221 Sum_probs=204.5
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhcc------CCCCceeEeEEEecCC
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI------RHRNIVRLLAFCSNKE 756 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~~~~~~~~ 756 (995)
+..+|+..+.||+|+||+||+|... +++.||||++... ......+.+|+++++.+ .|+||+++++++....
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~--~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 172 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE--KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN 172 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC--HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc--cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC
Confidence 3457899999999999999999764 5889999998532 22345677888888877 4779999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC--eEEeeecc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE--AHVADFGL 834 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~--vkl~DfGl 834 (995)
..++||||+. ++|.+++.......+++..++.++.||+.||+|||+.+ |+||||||+||+++.++. +||+|||+
T Consensus 173 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NILl~~~~~~~vkL~DFG~ 248 (429)
T 3kvw_A 173 HICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFGS 248 (429)
T ss_dssp EEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHT---EECSCCSGGGEEESSTTSCCEEECCCTT
T ss_pred eEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEccCCCcceEEeeccc
Confidence 9999999996 69999998666667999999999999999999999888 999999999999999987 99999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
++.... ......||+.|+|||++.+..++.++|||||||++|||++|+.||........+..+........ ..+
T Consensus 249 a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~-~~~ 322 (429)
T 3kvw_A 249 SCYEHQ-----RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPS-QKL 322 (429)
T ss_dssp CEETTC-----CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCC-HHH
T ss_pred ceecCC-----cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCC-HHH
Confidence 976432 22345789999999999999999999999999999999999999976443333333332221111 111
Q ss_pred hh-------hcCCc--------------------------------CCC-----CCHHHHHHHHHHHhcccCCCCCCCCC
Q 001922 915 LS-------ILDPR--------------------------------LSM-----VPKEEAMHLLFVAMLCIQENSIERPR 950 (995)
Q Consensus 915 ~~-------~~d~~--------------------------------~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt 950 (995)
.+ .++.. ... .+...+..+.+++.+||+.||++|||
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpt 402 (429)
T 3kvw_A 323 LDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMT 402 (429)
T ss_dssp HHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCC
T ss_pred HHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCC
Confidence 00 00000 000 00112466889999999999999999
Q ss_pred HHHHHHH
Q 001922 951 MREVVQM 957 (995)
Q Consensus 951 ~~evl~~ 957 (995)
++|++++
T Consensus 403 a~e~L~H 409 (429)
T 3kvw_A 403 PGQALRH 409 (429)
T ss_dssp HHHHHTS
T ss_pred HHHHhCC
Confidence 9999874
No 244
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.3e-37 Score=339.72 Aligned_cols=252 Identities=23% Similarity=0.298 Sum_probs=200.6
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
...+.|+..+.||+|+||.||+|... +|+.||+|++... ...+.+.+|+.++++++||||+++++++.+.+..++|
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 102 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE---SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIV 102 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT---SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch---HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 34567899999999999999999775 5899999998542 2356789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 103 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (314)
T 3com_A 103 MEYCGAGSVSDIIRL-RNKTLTEDEIATILQSTLKGLEYLHFMR---KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDT 178 (314)
T ss_dssp EECCTTEEHHHHHHH-HTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECTTCCEEECCCTTCEECBTT
T ss_pred eecCCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCcCHHHEEECCCCCEEEeecccchhhhhh
Confidence 999999999999863 3456899999999999999999999887 999999999999999999999999999876432
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
. .......|++.|+|||++.+..++.++||||+|+++|+|++|+.||...... .......... .+.
T Consensus 179 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~~~~--------~~~ 244 (314)
T 3com_A 179 M--AKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM----RAIFMIPTNP--------PPT 244 (314)
T ss_dssp B--SCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH----HHHHHHHHSC--------CCC
T ss_pred c--cccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH----HHHHHHhcCC--------Ccc
Confidence 2 1224457899999999999999999999999999999999999999653221 1111111110 000
Q ss_pred CCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 922 LSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 922 ~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
...+...+..+.+++.+||+.||++||+++++++
T Consensus 245 -~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 245 -FRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp -CSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred -cCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1123334567899999999999999999999986
No 245
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.9e-37 Score=352.54 Aligned_cols=258 Identities=26% Similarity=0.302 Sum_probs=197.5
Q ss_pred hccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecC------Ccce
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK------ETNL 759 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~~ 759 (995)
.|+..+.||+|+||+||+|++. +|+.||||++..... ...+|++++++++|||||++++++... .+.+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~-----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 5888899999999999999874 589999999854322 234699999999999999999988432 2367
Q ss_pred EEEEeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-CCeEEeeecccc
Q 001922 760 LVYEYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA-FEAHVADFGLAK 836 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~-~~vkl~DfGla~ 836 (995)
+||||+++ ++.+.+.. .....+++..++.++.||++||+|||+++ |+||||||+|||++.+ +.+||+|||+++
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 99999976 66666542 23467899999999999999999999777 9999999999999965 568999999998
Q ss_pred ccccCCCCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.+..... .....||+.|+|||++.+. .++.++||||+||++|||++|+.||........+.+..+.......+.+.
T Consensus 206 ~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 206 QLVRGEP---NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp ECCTTCC---CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHH
T ss_pred hcccCCC---ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 7643322 2345789999999998765 78999999999999999999999997654333444444433322222222
Q ss_pred hhcCCcC--------CC------CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SILDPRL--------SM------VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~d~~~--------~~------~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.. ++.+ .. .+...+..+.+++.+||+.||++||++.|++++
T Consensus 283 ~~-~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~h 337 (420)
T 1j1b_A 283 EM-NPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 337 (420)
T ss_dssp HH-CSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hh-ChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhCC
Confidence 11 1111 11 112345678999999999999999999999864
No 246
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=7.9e-37 Score=346.16 Aligned_cols=261 Identities=23% Similarity=0.249 Sum_probs=192.6
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCC------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKE------ 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 756 (995)
.++|+..+.||+|+||.||+|.. .+++.||||++.... .......+.+|+.+++.++||||+++++++...+
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 103 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 103 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccccccccc
Confidence 46789999999999999999976 468899999985432 2233456889999999999999999999997654
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..|+||||+++ +|.+++.. .+++..+..++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++
T Consensus 104 ~~~lv~e~~~~-~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 175 (371)
T 2xrw_A 104 DVYIVMELMDA-NLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR 175 (371)
T ss_dssp EEEEEEECCSE-EHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEECCCCC--
T ss_pred ceEEEEEcCCC-CHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCC---eecccCCHHHEEEcCCCCEEEEEeeccc
Confidence 67999999975 78888852 4889999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
..... .......||+.|+|||++.+..++.++||||+||++|||++|+.||................... ...+..
T Consensus 176 ~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~-~~~~~~ 251 (371)
T 2xrw_A 176 TAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP-CPEFMK 251 (371)
T ss_dssp -----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCC-CHHHHT
T ss_pred ccccc---cccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC-CHHHHH
Confidence 65322 22345679999999999999999999999999999999999999996532211111111100000 000000
Q ss_pred -----------------------hcC----CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 917 -----------------------ILD----PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 917 -----------------------~~d----~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
... +.........+..+.+++.+||+.||++|||++|+++.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp TSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred HhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000 00000112346789999999999999999999999874
No 247
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=1.7e-36 Score=339.33 Aligned_cols=261 Identities=21% Similarity=0.275 Sum_probs=205.8
Q ss_pred HhhccCCCeeeccCceEEEEEEe--CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC------ceeEeEEEecCC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM--PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN------IVRLLAFCSNKE 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~ 756 (995)
.++|+..+.||+|+||+||+|.. .+++.||||++... ....+.+.+|+++++.++|++ ++++++++.+.+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV--DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC--CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 45789999999999999999976 36889999998532 233566889999999997664 999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-------------
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS------------- 823 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~------------- 823 (995)
..++||||+ +++|.+++.......+++..++.++.|++.||+|||+++ |+||||||+||+++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCCGGGEEESCCCEEEEEC----C
T ss_pred cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeccccccccCCcccc
Confidence 999999999 889999998665567899999999999999999999887 999999999999987
Q ss_pred ------CCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 001922 824 ------AFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV 897 (995)
Q Consensus 824 ------~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~ 897 (995)
++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 241 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH-----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC-----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHH
T ss_pred ccccccCCCceEeeCcccccCccc-----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence 668999999999864321 234578999999999999999999999999999999999999997543322
Q ss_pred hHHHHHHHHhcCChhhhhhh---------------------------cCC--cCCCCCHHHHHHHHHHHhcccCCCCCCC
Q 001922 898 DIVQWSKRATNGRKEEFLSI---------------------------LDP--RLSMVPKEEAMHLLFVAMLCIQENSIER 948 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~---------------------------~d~--~~~~~~~~~~~~l~~li~~cl~~dP~~R 948 (995)
.... ...........+... ..+ .........+..+.+++.+||+.||++|
T Consensus 242 ~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 320 (339)
T 1z57_A 242 HLAM-MERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKR 320 (339)
T ss_dssp HHHH-HHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHH-HHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccc
Confidence 2222 222211111111000 000 0012234567889999999999999999
Q ss_pred CCHHHHHHH
Q 001922 949 PRMREVVQM 957 (995)
Q Consensus 949 Pt~~evl~~ 957 (995)
||++|+++.
T Consensus 321 pt~~ell~h 329 (339)
T 1z57_A 321 ITLREALKH 329 (339)
T ss_dssp CCHHHHTTS
T ss_pred cCHHHHhcC
Confidence 999999854
No 248
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.9e-37 Score=337.87 Aligned_cols=262 Identities=23% Similarity=0.322 Sum_probs=198.7
Q ss_pred HhhccCCCeeeccCceEEEEEEeC--CCc--EEEEEEecCCC--CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP--NGV--EIAVKKLLGFG--THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~--~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 758 (995)
.++|+..+.||+|+||+||+|++. +++ .||+|++.... .....+.+.+|++++++++||||+++++++.++. .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 357888999999999999999753 333 68999885432 2334567889999999999999999999998654 8
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
++||||+++++|.+++... ...+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKH-QGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEEECCTTCBHHHHHHHH-GGGSCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeeEecccCCCHHHHHHhc-cCCcCHHHHHHHHHHHHHHHHHHHhCC---cccCCCchheEEEcCCCCEEEccccccccc
Confidence 9999999999999999743 356889999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCCCc-cccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 839 IDGGASE-CMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 839 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
....... ......+|+.|+|||++.+..++.++||||+|+++|+|++ |+.||..... .+....+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~----~~~~~~~~~~~------ 241 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG----SQILHKIDKEG------ 241 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHTSC------
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH----HHHHHHHHccC------
Confidence 4432211 2234567889999999998889999999999999999999 9999965322 22222222110
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
.....+...+..+.+++.+||+.||++||+++++++.|+++....
T Consensus 242 ----~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 242 ----ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp ----CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred ----CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 001122345667999999999999999999999999999876543
No 249
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.8e-36 Score=347.21 Aligned_cols=262 Identities=19% Similarity=0.166 Sum_probs=203.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC--------CCCceeEeEEEe--
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR--------HRNIVRLLAFCS-- 753 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------hpniv~~~~~~~-- 753 (995)
.++|+..+.||+|+||+||+|+. .+++.||||++.. .....+.+.+|+.++++++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS--AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec--CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 36789999999999999999976 4688999999853 2233567889999999996 788999999987
Q ss_pred --cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCC-----
Q 001922 754 --NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAF----- 825 (995)
Q Consensus 754 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~----- 825 (995)
+....++||||+ ++++.+.+.......+++..++.++.||+.||.|||++ + |+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~g---ivHrDikp~NIll~~~~~~~~~ 189 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR---IIHTDIKPENILLSVNEQYIRR 189 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECCCCSGGGEEECCCHHHHHH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHeeEeccchhhhh
Confidence 566889999999 56777777655556799999999999999999999987 7 99999999999999775
Q ss_pred --------------------------------------------CeEEeeeccccccccCCCCccccccccCcccccccc
Q 001922 826 --------------------------------------------EAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEY 861 (995)
Q Consensus 826 --------------------------------------------~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~ 861 (995)
.+||+|||+++..... .....||+.|+|||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----~~~~~gt~~y~aPE~ 264 (397)
T 1wak_A 190 LAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----FTEDIQTRQYRSLEV 264 (397)
T ss_dssp HHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----SCSCCSCGGGCCHHH
T ss_pred hhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----CccCCCCCcccCChh
Confidence 7999999999875332 234578999999999
Q ss_pred cccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCc---h--HHHHHHHHhcCChhhhh-------hhcCC---------
Q 001922 862 AYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV---D--IVQWSKRATNGRKEEFL-------SILDP--------- 920 (995)
Q Consensus 862 ~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~---~--~~~~~~~~~~~~~~~~~-------~~~d~--------- 920 (995)
+.+..++.++|||||||++|||++|+.||....... . ................. .....
T Consensus 265 ~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (397)
T 1wak_A 265 LIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITK 344 (397)
T ss_dssp HHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCC
T ss_pred hcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccc
Confidence 999999999999999999999999999997644321 1 11111111111100000 00000
Q ss_pred -----------cCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 921 -----------RLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 921 -----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.....+...+..+.+++.+||+.||++|||++|++++
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 392 (397)
T 1wak_A 345 LKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392 (397)
T ss_dssp CCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTS
T ss_pred cCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhC
Confidence 0012356778899999999999999999999999863
No 250
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.5e-37 Score=348.80 Aligned_cols=261 Identities=23% Similarity=0.274 Sum_probs=185.6
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecC------C
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK------E 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~ 756 (995)
.++|+..+.||+|+||.||+|.. .+|+.||||++.... ......++.+|++++++++||||+++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 46899999999999999999975 568999999985432 223456788999999999999999999998654 5
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..|+||||+ +++|.+++.. ..+++..+..++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~g---ivH~Dlkp~NIll~~~~~~kL~DFG~a~ 180 (367)
T 2fst_X 108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR 180 (367)
T ss_dssp CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECTTCCEEECC-----
T ss_pred eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHhhEEECCCCCEEEeeccccc
Confidence 679999999 6799998853 46899999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.... ......||+.|+|||++.+ ..++.++||||+||++|||++|+.||........+............+.+.
T Consensus 181 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~ 255 (367)
T 2fst_X 181 HTAD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLK 255 (367)
T ss_dssp ---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred cccc-----cCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence 6532 2244679999999999876 678999999999999999999999996543322222222222211111111
Q ss_pred hhcC----------CcCCCCC-----HHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SILD----------PRLSMVP-----KEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~d----------~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+.. +.....+ ...+..+.+++.+||+.||++|||++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 256 KISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 0000 0001111 1234668899999999999999999999875
No 251
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.7e-37 Score=372.22 Aligned_cols=257 Identities=26% Similarity=0.341 Sum_probs=205.8
Q ss_pred HhhccCCCeeeccCceEEEEEEeC----CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP----NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..+.||+|+||+||+|++. .+..||+|++.........+.+.+|+.++++++||||+++++++. .+..++
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~l 467 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 467 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEE
Confidence 357888999999999999999764 246799999865444444577899999999999999999999985 467899
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++... +..+++..++.++.|++.||.|||+++ |+||||||+||+++.++.+||+|||+++....
T Consensus 468 v~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~g---ivHrDikp~NILl~~~~~vkL~DFG~a~~~~~ 543 (656)
T 2j0j_A 468 IMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543 (656)
T ss_dssp EEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCSGGGEEEEETTEEEECCCCCCCSCCC
T ss_pred EEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchHhEEEeCCCCEEEEecCCCeecCC
Confidence 99999999999999743 446899999999999999999999887 99999999999999999999999999987644
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD 919 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 919 (995)
... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||..... .+....+...
T Consensus 544 ~~~-~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~----~~~~~~i~~~---------- 608 (656)
T 2j0j_A 544 STY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN----NDVIGRIENG---------- 608 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH----HHHHHHHHHT----------
T ss_pred Ccc-eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH----HHHHHHHHcC----------
Confidence 322 12234567889999999998899999999999999999997 9999965322 1122222111
Q ss_pred CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCC
Q 001922 920 PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFP 962 (995)
Q Consensus 920 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~ 962 (995)
.....+..++..+.+++.+||+.||++||+++|+++.|+++.
T Consensus 609 -~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 609 -ERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp -CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -CCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111233445678999999999999999999999999998764
No 252
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=341.71 Aligned_cols=262 Identities=24% Similarity=0.373 Sum_probs=200.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
.++|+..+.||+|+||.||+|+... .||+|++.... .....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 32 ~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e 109 (319)
T 2y4i_B 32 FEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITS 109 (319)
T ss_dssp CSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECB
T ss_pred HHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEee
Confidence 3568899999999999999998743 59999985432 22334557889999999999999999999999999999999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC-
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG- 842 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~- 842 (995)
|+++++|.+++.. .+..+++..++.++.|++.||+|||+++ |+||||||+||+++ ++.+||+|||+++......
T Consensus 110 ~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 110 LCKGRTLYSVVRD-AKIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCCSEEHHHHTTS-SCCCCCSHHHHHHHHHHHHHHHHHHHTT---CCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred cccCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999964 3456889999999999999999999887 99999999999998 6899999999987543211
Q ss_pred --CCccccccccCccccccccccc---------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCCh
Q 001922 843 --ASECMSAIAGSYGYIAPEYAYT---------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRK 911 (995)
Q Consensus 843 --~~~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~ 911 (995)
.........|++.|+|||++.+ ..++.++||||||+++|||++|+.||..... ...........
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~- 259 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA----EAIIWQMGTGM- 259 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCH----HHHHHHHHTTC-
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH----HHHHHHhccCC-
Confidence 1122234568999999999864 3578899999999999999999999965322 11222222111
Q ss_pred hhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCCcc
Q 001922 912 EEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHSSD 967 (995)
Q Consensus 912 ~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~~~ 967 (995)
.+.. .....+..+.+++.+||+.||++||++++++++|+++.+....
T Consensus 260 -------~~~~--~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~~~ 306 (319)
T 2y4i_B 260 -------KPNL--SQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNRR 306 (319)
T ss_dssp -------CCCC--CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC------
T ss_pred -------CCCC--CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 1111 1112345688999999999999999999999999999876544
No 253
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=6.1e-38 Score=356.23 Aligned_cols=242 Identities=13% Similarity=0.113 Sum_probs=188.9
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCC--CCCChhHHHHHHHH---HHhccCCCCceeEe-------EE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGF--GTHSHDHGFRAEIQ---TLGNIRHRNIVRLL-------AF 751 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~--~~~~~~~~~~~E~~---~l~~l~hpniv~~~-------~~ 751 (995)
.++|+..+.||+|+||+||+|+. .+|+.||||++... ......+.+.+|+. ++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45788889999999999999986 56999999998532 23334577899994 55555799999998 77
Q ss_pred EecCCc-----------------ceEEEEeccCCChhhhhcCCC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 001922 752 CSNKET-----------------NLLVYEYMRNGSLGEALHGKK-----GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLI 809 (995)
Q Consensus 752 ~~~~~~-----------------~~lv~e~~~~gsL~~~l~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~i 809 (995)
+.+++. .|+||||+ +|+|.+++.... ...+++..++.++.||+.||+|||+++ |
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---i 227 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---L 227 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT---E
T ss_pred hhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCC---e
Confidence 665532 78999999 679999997421 122335888899999999999999887 9
Q ss_pred EecCCCCCCEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccC-----------CCCcccchhhHHH
Q 001922 810 VHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTL-----------RVDEKSDVYSFGV 878 (995)
Q Consensus 810 iHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-----------~~~~~~DvwSlGv 878 (995)
+||||||+||+++.++.+||+|||+++... .......| +.|+|||++.+. .++.++|||||||
T Consensus 228 vHrDikp~NIll~~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 228 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETT-----CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred ecCCCCHHHEEEcCCCCEEEEechhheecC-----CcccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 999999999999999999999999998632 12345567 999999999887 8999999999999
Q ss_pred HHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 879 VLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 879 il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
++|||++|+.||......... ..+.. ... ..+..+.+++.+||+.||++||++.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~~---------------~~~~~-~~~----~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGGS---------------EWIFR-SCK----NIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CCS---------------GGGGS-SCC----CCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccch---------------hhhhh-hcc----CCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 999999999999653221110 00111 111 23456889999999999999999999986
No 254
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=2.6e-37 Score=340.19 Aligned_cols=253 Identities=21% Similarity=0.286 Sum_probs=199.4
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
..++|+..+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 95 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK-SEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI 95 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC-CHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence 3567899999999999999999875 5889999998543 3344677899999999999999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||+++++|.+++.. ....+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+|||++......
T Consensus 96 e~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~- 170 (302)
T 2j7t_A 96 EFCPGGAVDAIMLE-LDRGLTEPQIQVVCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT- 170 (302)
T ss_dssp ECCTTEEHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH-
T ss_pred EeCCCCcHHHHHHh-hccCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEECCCCCEEEEECCCCcccccc-
Confidence 99999999998864 2355899999999999999999999887 999999999999999999999999997643211
Q ss_pred CCccccccccCccccccccc-----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 843 ASECMSAIAGSYGYIAPEYA-----YTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~-----~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
........||+.|+|||++ .+..++.++||||+|+++|+|++|+.||....... .........
T Consensus 171 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~----~~~~~~~~~------- 238 (302)
T 2j7t_A 171 -LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR----VLLKIAKSD------- 238 (302)
T ss_dssp -HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH----HHHHHHHSC-------
T ss_pred -ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH----HHHHHhccC-------
Confidence 1112345689999999987 36678999999999999999999999996533211 111111110
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
+.....+...+..+.+++.+||+.||++||+++|+++
T Consensus 239 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 239 --PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp --CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred --CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0011123345667899999999999999999999976
No 255
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.4e-36 Score=338.26 Aligned_cols=252 Identities=25% Similarity=0.350 Sum_probs=197.4
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEec------C
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSN------K 755 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~------~ 755 (995)
..++|+..+.||+|+||.||+|+. .+++.||+|++... ....+.+.+|+.+++++ +||||+++++++.. .
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 99 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 99 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--SSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCC
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecC--cccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcccc
Confidence 356789999999999999999987 47899999998543 23456789999999999 79999999999976 4
Q ss_pred CcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccc
Q 001922 756 ETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLA 835 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla 835 (995)
+..++||||+++|+|.+++.......+++..++.++.||+.||.|||+.+ |+||||||+||+++.++.+||+|||++
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~ 176 (326)
T 2x7f_A 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDFGVS 176 (326)
T ss_dssp CEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEECTTCCEEECCCTTT
T ss_pred ceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCcHHHEEEcCCCCEEEeeCcCc
Confidence 67899999999999999998655567899999999999999999999887 999999999999999999999999999
Q ss_pred cccccCCCCccccccccCcccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC
Q 001922 836 KFLIDGGASECMSAIAGSYGYIAPEYAY-----TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR 910 (995)
Q Consensus 836 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 910 (995)
....... .......||+.|+|||++. +..++.++|||||||++|+|++|+.||........ ...+....
T Consensus 177 ~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~ 250 (326)
T 2x7f_A 177 AQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA----LFLIPRNP 250 (326)
T ss_dssp C---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH----HHHHHHSC
T ss_pred eecCcCc--cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHH----HHHhhcCc
Confidence 8653321 1223457899999999987 56788999999999999999999999965332111 11111110
Q ss_pred hhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 911 KEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 911 ~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.+ ...+...+..+.+++.+||+.||++||+++|+++
T Consensus 251 --------~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 251 --------AP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp --------CC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred --------cc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 01 1112234567889999999999999999999987
No 256
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=352.68 Aligned_cols=330 Identities=21% Similarity=0.162 Sum_probs=207.0
Q ss_pred cccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEcc
Q 001922 236 NLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLF 315 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 315 (995)
++++|+|++|++++..+..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+++..+..|.++++|+.|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 44555555555554445555555555555555555555445555555555555555555554444445555555555555
Q ss_pred CCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC
Q 001922 316 MNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI 395 (995)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 395 (995)
+|++.+..|..|..+++|+.|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~ 192 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIR 192 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEEC
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeC
Confidence 55555555555555555555555555555555555555555555555555555443344555555555555555555555
Q ss_pred CcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCcccc
Q 001922 396 PERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLS 475 (995)
Q Consensus 396 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 475 (995)
+..+..+++|+.|++++|.+.+.+|.......+|+.+++++|.+++..+. .+..+++|+.|+|++|++++..+..|.
T Consensus 193 ~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~---~~~~l~~L~~L~Ls~n~l~~~~~~~~~ 269 (477)
T 2id5_A 193 DYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYL---AVRHLVYLRFLNLSYNPISTIEGSMLH 269 (477)
T ss_dssp TTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHH---HHTTCTTCCEEECCSSCCCEECTTSCT
T ss_pred hhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHH---HhcCccccCeeECCCCcCCccChhhcc
Confidence 55555555555555555555555555554445556666666655532111 123457899999999999988888899
Q ss_pred CCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeE
Q 001922 476 NFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYL 555 (995)
Q Consensus 476 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L 555 (995)
++++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|.++...+. ..-...+..+
T Consensus 270 ~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~-~~~~~~~~~~ 348 (477)
T 2id5_A 270 ELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL-LWVFRRRWRL 348 (477)
T ss_dssp TCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG-HHHHTTTTSS
T ss_pred ccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch-HhHHhhhhcc
Confidence 999999999999999998999999999999999999999977777889999999999999999854331 1112223334
Q ss_pred eccccccccccCcc
Q 001922 556 NLSRNHLNQNIPKS 569 (995)
Q Consensus 556 ~L~~N~l~~~~p~~ 569 (995)
.+.++...-.-|..
T Consensus 349 ~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 349 NFNRQQPTCATPEF 362 (477)
T ss_dssp CCTTCCCBEEESGG
T ss_pred ccCccCceeCCchH
Confidence 44555444434443
No 257
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-36 Score=369.54 Aligned_cols=249 Identities=23% Similarity=0.248 Sum_probs=205.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC--CCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLL 760 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~l 760 (995)
.++|+..++||+|+||+||+|+.. +++.||||++.... .....+.+..|..++..+ +||+|+++++++++.+..|+
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 356888899999999999999764 57889999985321 223356678899999988 79999999999999999999
Q ss_pred EEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccccc
Q 001922 761 VYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLID 840 (995)
Q Consensus 761 v~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~ 840 (995)
||||+++|+|.+++.. ...+++..++.++.||+.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 420 V~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~g---IiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQ--VGRFKEPHAVFYAAEIAIGLFFLQSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EEECCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTS---EECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EEeCcCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 9999999999999964 346899999999999999999999887 99999999999999999999999999986432
Q ss_pred CCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCC
Q 001922 841 GGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDP 920 (995)
Q Consensus 841 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 920 (995)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.||... +..+....+...
T Consensus 495 ~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~----~~~~~~~~i~~~----------- 557 (674)
T 3pfq_A 495 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGE----DEDELFQSIMEH----------- 557 (674)
T ss_dssp TT--CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCS----SHHHHHHHHHSS-----------
T ss_pred CC--cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCC----CHHHHHHHHHhC-----------
Confidence 22 2235678999999999999999999999999999999999999999652 222222222222
Q ss_pred cCCCCCHHHHHHHHHHHhcccCCCCCCCCCH-----HHHHH
Q 001922 921 RLSMVPKEEAMHLLFVAMLCIQENSIERPRM-----REVVQ 956 (995)
Q Consensus 921 ~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~-----~evl~ 956 (995)
. ...+...+..+.+++.+||+.||++||++ +||++
T Consensus 558 ~-~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 558 N-VAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp C-CCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred C-CCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 1 12334456778999999999999999997 77764
No 258
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=348.32 Aligned_cols=266 Identities=20% Similarity=0.282 Sum_probs=184.2
Q ss_pred HhhccC-CCeeeccCceEEEEEEeC---CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEe--cCCcc
Q 001922 685 LECVKD-GNVIGRGGAGIVYHGKMP---NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCS--NKETN 758 (995)
Q Consensus 685 ~~~~~~-~~~lG~G~~g~V~~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~--~~~~~ 758 (995)
.+.|+. +++||+|+||+||+|++. +++.||+|++... .....+.+|+.++++++||||+++++++. .....
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~ 95 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT---GISMSACREIALLRELKHPNVISLQKVFLSHADRKV 95 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS---SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC---CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeE
Confidence 445665 668999999999999865 5788999998532 22456889999999999999999999994 46788
Q ss_pred eEEEEeccCCChhhhhcC-------CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE----CCCCCe
Q 001922 759 LLVYEYMRNGSLGEALHG-------KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL----NSAFEA 827 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~-------~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill----~~~~~v 827 (995)
|+||||+.+ +|.+++.. .....+++..++.++.||+.||+|||+.+ |+||||||+||++ +.++.+
T Consensus 96 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~Dlkp~NIll~~~~~~~~~~ 171 (405)
T 3rgf_A 96 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRV 171 (405)
T ss_dssp EEEEECCSE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEECCSSTTTTCE
T ss_pred EEEEeCCCC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCC---EeCCCcCHHHeEEecCCCCCCcE
Confidence 999999965 88887752 12235899999999999999999999887 9999999999999 678899
Q ss_pred EEeeeccccccccCCC-CccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCC---------
Q 001922 828 HVADFGLAKFLIDGGA-SECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDG--------- 896 (995)
Q Consensus 828 kl~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~--------- 896 (995)
||+|||+++.+..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||......
T Consensus 172 kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~ 251 (405)
T 3rgf_A 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHH 251 (405)
T ss_dssp EECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCH
T ss_pred EEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchH
Confidence 9999999987643211 1223456799999999998874 5899999999999999999999999653321
Q ss_pred chHHHHHHHHhcCChhhhhhh------------c-CCcCCCCCH---------HHHHHHHHHHhcccCCCCCCCCCHHHH
Q 001922 897 VDIVQWSKRATNGRKEEFLSI------------L-DPRLSMVPK---------EEAMHLLFVAMLCIQENSIERPRMREV 954 (995)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~------------~-d~~~~~~~~---------~~~~~l~~li~~cl~~dP~~RPt~~ev 954 (995)
..+..............+..+ + ......... ..+..+.+++.+||+.||++|||++|+
T Consensus 252 ~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~ 331 (405)
T 3rgf_A 252 DQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQA 331 (405)
T ss_dssp HHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHH
T ss_pred HHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHH
Confidence 111111111111111100000 0 000000000 014567899999999999999999999
Q ss_pred HHH
Q 001922 955 VQM 957 (995)
Q Consensus 955 l~~ 957 (995)
+++
T Consensus 332 L~h 334 (405)
T 3rgf_A 332 MQD 334 (405)
T ss_dssp HTS
T ss_pred hcC
Confidence 975
No 259
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=1e-36 Score=337.21 Aligned_cols=252 Identities=22% Similarity=0.275 Sum_probs=195.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCC-CCChhHHHHHHHHHHhccC--CCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIR--HRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~~~~lv 761 (995)
.++|+..+.||+|+||.||+|+..+++.||||++.... .....+.+.+|++++++++ ||||+++++++.+.+..++|
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 106 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 106 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEE
T ss_pred cceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEE
Confidence 35688899999999999999998889999999985432 2234567889999999997 59999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|| +.+++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||++++ +.+||+|||+++.+...
T Consensus 107 ~e-~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 107 ME-CGNIDLNSWLKK--KKSIDPWERKSYWKNMLEAVHTIHQHG---IVHSDLKPANFLIVD-GMLKLIDFGIANQMQPD 179 (313)
T ss_dssp EC-CCSEEHHHHHHH--CSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCCGGGEEEET-TEEEECCCSSSCC----
T ss_pred Ee-cCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEEEC-CeEEEeeccccccccCc
Confidence 99 557899999964 346889999999999999999999887 999999999999964 89999999999876543
Q ss_pred CCCccccccccCccccccccccc-----------CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCC
Q 001922 842 GASECMSAIAGSYGYIAPEYAYT-----------LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGR 910 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~-----------~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~ 910 (995)
..........||+.|+|||++.+ ..++.++||||||+++|||++|+.||....... ... ..
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~--~~~-~~----- 251 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--SKL-HA----- 251 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHH--HHH-HH-----
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHH--HHH-HH-----
Confidence 33333345679999999999865 468889999999999999999999996543221 111 11
Q ss_pred hhhhhhhcCCcC-CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 911 KEEFLSILDPRL-SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 911 ~~~~~~~~d~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..++.. ...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 252 ------~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 252 ------IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp ------HHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred ------HHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111 11222235678899999999999999999999864
No 260
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=2e-36 Score=342.02 Aligned_cols=267 Identities=22% Similarity=0.237 Sum_probs=194.0
Q ss_pred HHHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCc--
Q 001922 681 VSDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET-- 757 (995)
Q Consensus 681 ~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~-- 757 (995)
.....++|+..+.||+|+||+||+|+. .+++.||||++.... .......+|++.++.++||||+++++++...+.
T Consensus 18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~ 95 (360)
T 3e3p_A 18 SRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERD 95 (360)
T ss_dssp HHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSC
T ss_pred chhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccc
Confidence 345577899999999999999999987 468999999985432 224456778888899999999999999865333
Q ss_pred -----ceEEEEeccCCChhhhhcC--CCCCCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEecCCCCCCEEECC-CCCe
Q 001922 758 -----NLLVYEYMRNGSLGEALHG--KKGAFLGWNLRYKIAIEAAKGLCYLH--HDCSPLIVHRDVKSNNILLNS-AFEA 827 (995)
Q Consensus 758 -----~~lv~e~~~~gsL~~~l~~--~~~~~~~~~~~~~i~~qi~~~l~~LH--~~~~~~iiHrDlkp~Nill~~-~~~v 827 (995)
.++||||+++ ++.+.+.. .....+++..+..++.|++.|+.||| +.+ |+||||||+||+++. ++.+
T Consensus 96 ~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~---ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 96 RRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVN---VCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp TTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTC---CBCSCCCGGGEEEETTTTEE
T ss_pred ccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCC---eecCcCCHHHEEEeCCCCcE
Confidence 7899999986 55544431 34567889999999999999999999 777 999999999999997 8999
Q ss_pred EEeeeccccccccCCCCccccccccCcccccccccccCC-CCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 828 HVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLR-VDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 828 kl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
||+|||+++.+.... ......||+.|+|||++.+.. ++.++||||+||++|||++|+.||.............+..
T Consensus 172 kl~Dfg~a~~~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 248 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE---PNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248 (360)
T ss_dssp EECCCTTCBCCCTTS---CCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHH
T ss_pred EEeeCCCceecCCCC---CcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHc
Confidence 999999998764332 223457899999999986654 8999999999999999999999997654433344433332
Q ss_pred hcCChhhhhhhcCCcC-----------------CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 907 TNGRKEEFLSILDPRL-----------------SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~-----------------~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...... ....+++.. ...+...+..+.+++.+||+.||++|||++|++++
T Consensus 249 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 249 GCPSRE-VLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCH 315 (360)
T ss_dssp CCCCHH-HHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTTS
T ss_pred CCCCHH-HHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 222211 111111111 11122256789999999999999999999999864
No 261
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=1.3e-36 Score=342.53 Aligned_cols=271 Identities=20% Similarity=0.272 Sum_probs=203.1
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecC-----Ccc
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNK-----ETN 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~-----~~~ 758 (995)
.++|+..+.||+|+||.||+|+.. +|+.||||++...........+.+|++++++++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 467889999999999999999874 68899999996544444456688999999999999999999988654 678
Q ss_pred eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccccc
Q 001922 759 LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 759 ~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
++||||+. |+|.+++.. ..+++..+..++.|++.||+|||+++ |+||||||+||+++.++.+||+|||+++.+
T Consensus 90 ~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSN---VIHRDLKPSNLLINSNCDLKVCDFGLARII 162 (353)
T ss_dssp EEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEEcCCCcEEEEeccccccc
Confidence 99999997 599999864 35899999999999999999999887 999999999999999999999999999876
Q ss_pred ccCCCCc--------cccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcC
Q 001922 839 IDGGASE--------CMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNG 909 (995)
Q Consensus 839 ~~~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~ 909 (995)
....... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||...................
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 242 (353)
T 2b9h_A 163 DESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTP 242 (353)
T ss_dssp C----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred ccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 4322111 1223578999999998754 678999999999999999999999997543222222221111111
Q ss_pred Chhh---------hhhhcC--CcCCC-----CCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH--HccCC
Q 001922 910 RKEE---------FLSILD--PRLSM-----VPKEEAMHLLFVAMLCIQENSIERPRMREVVQM--LSEFP 962 (995)
Q Consensus 910 ~~~~---------~~~~~d--~~~~~-----~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~--L~~~~ 962 (995)
.... ...... +.... .....+..+.+++.+||+.||++|||++|+++. ++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 243 HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp CSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred chhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence 0000 000000 00000 112345678899999999999999999999873 44443
No 262
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.5e-36 Score=329.66 Aligned_cols=254 Identities=25% Similarity=0.302 Sum_probs=203.7
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCC-CCChhHHHHHHHHHHhccCCCCceeEeEEEecCCcce
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFG-THSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNL 759 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 759 (995)
..+.++|+..+.||+|+||.||+|+.. +++.||+|++.... .......+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 446778999999999999999999875 68999999984332 2344677899999999999999999999999999999
Q ss_pred EEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC---CCeEEeeecccc
Q 001922 760 LVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA---FEAHVADFGLAK 836 (995)
Q Consensus 760 lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~---~~vkl~DfGla~ 836 (995)
+||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.+ +.+||+|||++.
T Consensus 98 lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~ 172 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK--RKRFSEHDAARIIKQVFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLST 172 (287)
T ss_dssp EEECCCCSCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred EEEEccCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChhhEEEecCCCcccEEEeccCcce
Confidence 99999999999998853 346899999999999999999999887 9999999999999764 469999999998
Q ss_pred ccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
...... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||..... ......+.......
T Consensus 173 ~~~~~~---~~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~--- 241 (287)
T 2wei_A 173 CFQQNT---KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE----YDILKRVETGKYAF--- 241 (287)
T ss_dssp TBCCCS---SCSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHHHHCCCCC---
T ss_pred eecCCC---ccccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH----HHHHHHHHcCCCCC---
Confidence 754322 2234468999999998865 489999999999999999999999965321 12222222111000
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
..+. ....+..+.+++.+||+.||++||+++|+++
T Consensus 242 -~~~~----~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 -DLPQ----WRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp -CSGG----GTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred -Cchh----hhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 0000 1123557889999999999999999999987
No 263
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.9e-36 Score=332.62 Aligned_cols=254 Identities=24% Similarity=0.286 Sum_probs=203.4
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC--------ChhHHHHHHHHHHhccC-CCCceeEeEEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH--------SHDHGFRAEIQTLGNIR-HRNIVRLLAFC 752 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~-hpniv~~~~~~ 752 (995)
...++|+..+.||+|+||.||+|+.. +++.||||++...... ...+.+.+|+++++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34578999999999999999999874 6889999998543211 12345788999999995 99999999999
Q ss_pred ecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeee
Q 001922 753 SNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADF 832 (995)
Q Consensus 753 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~Df 832 (995)
.+.+..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++.++.+||+||
T Consensus 94 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 94 ETNTFFFLVFDLMKKGELFDYLTE--KVTLSEKETRKIMRALLEVICALHKLN---IVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH--HSSCCHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEECTTCCEEECCC
T ss_pred ccCCeEEEEEeccCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999999964 356899999999999999999999887 999999999999999999999999
Q ss_pred ccccccccCCCCccccccccCcccccccccc------cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAY------TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~------~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
|++....... ......|++.|+|||++. ...++.++||||+|+++|+|++|+.||..... ......+
T Consensus 169 g~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~ 241 (298)
T 1phk_A 169 GFSCQLDPGE---KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ----MLMLRMI 241 (298)
T ss_dssp TTCEECCTTC---CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH----HHHHHHH
T ss_pred cchhhcCCCc---ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH----HHHHHHH
Confidence 9998764332 224457899999999875 45688999999999999999999999965321 1111111
Q ss_pred hcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 907 TNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 907 ~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
...... . ........+..+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~-------~-~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 242 MSGNYQ-------F-GSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHTCCC-------C-CTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred hcCCcc-------c-CcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 111000 0 00111245667899999999999999999999986
No 264
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=2.1e-36 Score=342.69 Aligned_cols=259 Identities=21% Similarity=0.254 Sum_probs=198.5
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCcc----
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETN---- 758 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---- 758 (995)
.++|...+.||+|+||+||+|.. .+|+.||||++...... .....+.+|+.+++.++||||+++++++...+..
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 45788899999999999999976 46899999998543222 2346688999999999999999999999877655
Q ss_pred --eEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 759 --LLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 759 --~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 121 ~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~Dikp~NIll~~~~~~kL~Dfg~a~ 192 (371)
T 4exu_A 121 DFYLVMPFMQ-TDLQKIMG----MEFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLAR 192 (371)
T ss_dssp CCEEEEECCC-EEHHHHTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTCCEEECSTTCC-
T ss_pred eEEEEEcccc-ccHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHHCC---CcCCCcCHHHeEECCCCCEEEEecCccc
Confidence 99999997 58888874 34899999999999999999999887 9999999999999999999999999998
Q ss_pred ccccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 837 FLIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 837 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
.... ......||+.|+|||++.+ ..++.++||||+||++|+|++|+.||.................... ..+.
T Consensus 193 ~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~ 266 (371)
T 4exu_A 193 HADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG-TEFV 266 (371)
T ss_dssp ------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC-HHHH
T ss_pred cccc-----CcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc-HHHH
Confidence 6532 2234578999999999887 6789999999999999999999999975433222222222221111 1111
Q ss_pred hhc------------CCcCC----CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 916 SIL------------DPRLS----MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 916 ~~~------------d~~~~----~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
..+ ..... ......+..+.+++.+||+.||++|||++|+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 267 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp TTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 100 00000 0112345678999999999999999999999875
No 265
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4.4e-36 Score=342.93 Aligned_cols=334 Identities=20% Similarity=0.179 Sum_probs=238.0
Q ss_pred CcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEc
Q 001922 235 VNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNL 314 (995)
Q Consensus 235 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 314 (995)
.++++|++++|.++...+..+..+++|++|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|+.|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 45666666666666444444566666666666666666555556666677777777777776666666666677777777
Q ss_pred cCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCC
Q 001922 315 FMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGP 394 (995)
Q Consensus 315 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 394 (995)
++|+++...+..|..+++|++|++++|++++..|..+..+++|++|++++|++++. .+..+++|+.|++++|.+.+
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~- 200 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST- 200 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSE-
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeecccccccc-
Confidence 77776644444456667777777777777666666666666777777777766642 23444555555555555432
Q ss_pred CCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccc
Q 001922 395 IPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSL 474 (995)
Q Consensus 395 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 474 (995)
+....+|++|++++|.+... | . ....+|+.|++++|++++. ..+
T Consensus 201 ----~~~~~~L~~L~l~~n~l~~~-~------------------------~-----~~~~~L~~L~l~~n~l~~~--~~l 244 (390)
T 3o6n_A 201 ----LAIPIAVEELDASHNSINVV-R------------------------G-----PVNVELTILKLQHNNLTDT--AWL 244 (390)
T ss_dssp ----EECCSSCSEEECCSSCCCEE-E------------------------C-----CCCSSCCEEECCSSCCCCC--GGG
T ss_pred ----cCCCCcceEEECCCCeeeec-c------------------------c-----cccccccEEECCCCCCccc--HHH
Confidence 22234566666666655422 1 1 1125788999999999853 578
Q ss_pred cCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCe
Q 001922 475 SNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNY 554 (995)
Q Consensus 475 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 554 (995)
..+++|+.|+|++|++++..|..++.+++|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|++
T Consensus 245 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~ 322 (390)
T 3o6n_A 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV-ALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 322 (390)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCC-EEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCc-ccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCE
Confidence 89999999999999999888999999999999999999998 47888888999999999999998 68888999999999
Q ss_pred EeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCCCCC
Q 001922 555 LNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLCGTL 614 (995)
Q Consensus 555 L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~ 614 (995)
|+|++|++++. | +..+++|+.|++++|++.+.-.. .-+..+....+.+++..|+.+
T Consensus 323 L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~~~ 378 (390)
T 3o6n_A 323 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 378 (390)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCCTT
T ss_pred EECCCCcccee-C--chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceeccc
Confidence 99999999764 4 77889999999999998864221 123445556678888888854
No 266
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=337.75 Aligned_cols=259 Identities=21% Similarity=0.247 Sum_probs=198.4
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-ChhHHHHHHHHHHhccCCCCceeEeEEEecCCc------
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-SHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET------ 757 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~------ 757 (995)
++|...+.||+|+||.||+|+. .+|+.||||++...... .....+.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 5688889999999999999976 46899999998543222 234568899999999999999999999977654
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||++ ++|.+++. ..+++..++.++.||+.||.|||+++ |+||||||+||+++.++.+||+|||+++.
T Consensus 104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMG----LKFSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp CEEEEECCS-EEGGGTTT----SCCCHHHHHHHHHHHHHHHHHHHHTT---CCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEEecccc-CCHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEeECCCCcEEEeecccccC
Confidence 499999997 58888874 24899999999999999999999887 99999999999999999999999999986
Q ss_pred cccCCCCccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
... ......+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||..........................
T Consensus 176 ~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 250 (353)
T 3coi_A 176 ADA-----EMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQK 250 (353)
T ss_dssp -------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTT
T ss_pred CCC-----CccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHH
Confidence 432 1234578999999999876 6789999999999999999999999975432222222222111111110000
Q ss_pred -----------hc----CCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 917 -----------IL----DPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 917 -----------~~----d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+ .+.........+..+.+++.+|++.||++|||++|+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~h 306 (353)
T 3coi_A 251 LNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306 (353)
T ss_dssp CSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 00 011122233456789999999999999999999999864
No 267
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.3e-36 Score=337.43 Aligned_cols=254 Identities=22% Similarity=0.242 Sum_probs=174.3
Q ss_pred HHhhccCC-CeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec----CCc
Q 001922 684 ILECVKDG-NVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN----KET 757 (995)
Q Consensus 684 ~~~~~~~~-~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----~~~ 757 (995)
+.++|... ++||+|+||+||+|+.. +++.||||++... .....+....++.++||||+++++++.. ...
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 100 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRC 100 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCce
Confidence 35678874 56999999999999875 6899999998431 2222233334566799999999999865 455
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCCeEEeeecc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS---AFEAHVADFGL 834 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~---~~~vkl~DfGl 834 (995)
.++||||+++|+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||+
T Consensus 101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~---ivH~dlkp~NIll~~~~~~~~~kl~Dfg~ 177 (336)
T 3fhr_A 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGF 177 (336)
T ss_dssp EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTT---EECSCCSGGGEEESCSSTTCCEEECCCTT
T ss_pred EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEEecCCCceEEEecccc
Confidence 899999999999999998766667999999999999999999999887 999999999999986 45599999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
++..... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.....................
T Consensus 178 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--- 250 (336)
T 3fhr_A 178 AKETTQN----ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQY--- 250 (336)
T ss_dssp CEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------------------
T ss_pred ceecccc----ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhcccc---
Confidence 9865322 223457899999999998888999999999999999999999999654322111111111110000
Q ss_pred hhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 915 LSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 915 ~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.... ......+..+.+++.+||+.||++|||++|+++.
T Consensus 251 -~~~~----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 288 (336)
T 3fhr_A 251 -GFPN----PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNH 288 (336)
T ss_dssp -CCCT----TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred -ccCc----hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 0000 1112345678899999999999999999999973
No 268
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.1e-36 Score=332.87 Aligned_cols=254 Identities=23% Similarity=0.338 Sum_probs=194.6
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec--------
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN-------- 754 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 754 (995)
+.++|+..+.||+|+||.||+|+. .+++.||||++.. .....+.+.+|+.++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 81 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH--TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPM 81 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE--EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC--
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec--cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhh
Confidence 567899999999999999999986 4789999999843 22335678899999999999999999998754
Q ss_pred -----CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEE
Q 001922 755 -----KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHV 829 (995)
Q Consensus 755 -----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl 829 (995)
....|+||||+++|+|.+++.. .+..+++..++.++.|++.||+|||+++ |+||||||+||+++.++.+||
T Consensus 82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~---i~H~dlkp~Nil~~~~~~~kl 157 (303)
T 1zy4_A 82 TAVKKKSTLFIQMEYCENGTLYDLIHS-ENLNQQRDEYWRLFRQILEALSYIHSQG---IIHRDLKPMNIFIDESRNVKI 157 (303)
T ss_dssp ----CEEEEEEEEECCCSCBHHHHHHH-SCGGGCHHHHHHHHHHHHHHHHHHHHTT---CCCSCCCGGGEEECTTSCEEE
T ss_pred cccccCCceEEEEecCCCCCHHHhhhc-cccccchHHHHHHHHHHHHHHHHHHhCC---eecccCCHHhEEEcCCCCEEE
Confidence 4567999999999999999974 3456788999999999999999999887 999999999999999999999
Q ss_pred eeeccccccccCC------------CCccccccccCcccccccccccC-CCCcccchhhHHHHHHHHHhCCCCCCCCCCC
Q 001922 830 ADFGLAKFLIDGG------------ASECMSAIAGSYGYIAPEYAYTL-RVDEKSDVYSFGVVLLELLTGRRPVGDFGDG 896 (995)
Q Consensus 830 ~DfGla~~~~~~~------------~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DvwSlGvil~elltg~~Pf~~~~~~ 896 (995)
+|||+++...... .........||+.|+|||++.+. .++.++||||+|+++|||++ ||...
T Consensus 158 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~--- 231 (303)
T 1zy4_A 158 GDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG--- 231 (303)
T ss_dssp CCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH---
T ss_pred eeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc---
Confidence 9999998653221 01222345689999999998764 68999999999999999998 55321
Q ss_pred chHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 897 VDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
.+............. ......+...+..+.+++.+||+.||++|||++|+++.
T Consensus 232 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 284 (303)
T 1zy4_A 232 MERVNILKKLRSVSI--------EFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284 (303)
T ss_dssp HHHHHHHHHHHSTTC--------CCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred hhHHHHHHhcccccc--------ccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCC
Confidence 122222222221100 00112334455678899999999999999999999874
No 269
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=6.6e-37 Score=347.07 Aligned_cols=253 Identities=10% Similarity=0.030 Sum_probs=179.9
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCC--ChhHHHHHHHHHHhcc--CCCCceeEe-------EEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTH--SHDHGFRAEIQTLGNI--RHRNIVRLL-------AFCS 753 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l--~hpniv~~~-------~~~~ 753 (995)
..|+..+.||+|+||+||+|++. +++.||||++...... ...+.+.+|+.+++.+ +||||++++ +++.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEE
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhee
Confidence 34788899999999999999864 7899999999654321 2345577885555444 699988755 4443
Q ss_pred cC-----------------CcceEEEEeccCCChhhhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 001922 754 NK-----------------ETNLLVYEYMRNGSLGEALHGKKGAFLGWNLR------YKIAIEAAKGLCYLHHDCSPLIV 810 (995)
Q Consensus 754 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~------~~i~~qi~~~l~~LH~~~~~~ii 810 (995)
.. ...|+||||++ |+|.+++... +..+++..+ ..++.||+.||+|||+++ |+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~---iv 216 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL-DFVYVFRGDEGILALHILTAQLIRLAANLQSKG---LV 216 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH-HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTT---EE
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh-ccccchhhhhhhhhHHHHHHHHHHHHHHHHHCC---Cc
Confidence 32 33799999998 7999999743 223345555 678899999999999887 99
Q ss_pred ecCCCCCCEEECCCCCeEEeeeccccccccCCCCccccccccCccccccccccc--CCCCcccchhhHHHHHHHHHhCCC
Q 001922 811 HRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT--LRVDEKSDVYSFGVVLLELLTGRR 888 (995)
Q Consensus 811 HrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~ 888 (995)
||||||+||+++.++.+||+|||+++.... ......+|+.|+|||++.+ ..++.++||||+||++|||++|+.
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~ 291 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----RGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFL 291 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----EEEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSC
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----CccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999986522 1124567799999999987 679999999999999999999999
Q ss_pred CCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 889 PVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLS-MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 889 Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
||......... .+ .............. ......+..+.+++.+||+.||++||+++|+++
T Consensus 292 Pf~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 292 PFGLVTPGIKG-SW-------KRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp STTBCCTTCTT-CC-------CBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCCcCccccc-ch-------hhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 99764221110 00 00000000011111 111245667999999999999999999999975
No 270
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.6e-36 Score=361.74 Aligned_cols=334 Identities=20% Similarity=0.171 Sum_probs=241.2
Q ss_pred CcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEc
Q 001922 235 VNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNL 314 (995)
Q Consensus 235 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 314 (995)
.+++.|++++|.++...+..+..+++|+.|++++|.+++..|..|..+++|++|+|++|.|++..|..|+++++|++|+|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 130 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 130 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEe
Confidence 34566666666666544445566666666666666666655556666666666666666666666666666666666666
Q ss_pred cCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCC
Q 001922 315 FMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGP 394 (995)
Q Consensus 315 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 394 (995)
++|.|++..+..|..+++|++|+|++|.+++..|..|+.+++|++|+|++|.+++. + +..+++|+.|++++|.+.+
T Consensus 131 ~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~--~~~l~~L~~L~l~~n~l~~- 206 (597)
T 3oja_B 131 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV-D--LSLIPSLFHANVSYNLLST- 206 (597)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC-C--GGGCTTCSEEECCSSCCSE-
T ss_pred eCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCc-C--hhhhhhhhhhhcccCcccc-
Confidence 66666655555556666666666666666666666666666666666666666643 1 3344555555555555432
Q ss_pred CCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccc
Q 001922 395 IPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSL 474 (995)
Q Consensus 395 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 474 (995)
+....+|+.|++++|.+....+. .+.+|+.|+|++|.+++ +..+
T Consensus 207 ----l~~~~~L~~L~ls~n~l~~~~~~------------------------------~~~~L~~L~L~~n~l~~--~~~l 250 (597)
T 3oja_B 207 ----LAIPIAVEELDASHNSINVVRGP------------------------------VNVELTILKLQHNNLTD--TAWL 250 (597)
T ss_dssp ----EECCTTCSEEECCSSCCCEEECS------------------------------CCSCCCEEECCSSCCCC--CGGG
T ss_pred ----ccCCchhheeeccCCcccccccc------------------------------cCCCCCEEECCCCCCCC--Chhh
Confidence 22334566666666665422111 12468899999999986 4678
Q ss_pred cCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCe
Q 001922 475 SNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNY 554 (995)
Q Consensus 475 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~ 554 (995)
..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++ +|..++.+++|++|+|++|.++ .+|..+..+++|++
T Consensus 251 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~ 328 (597)
T 3oja_B 251 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLEN 328 (597)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSE
T ss_pred ccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCE
Confidence 899999999999999998889999999999999999999985 7888888999999999999998 78989999999999
Q ss_pred EeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCCCCC
Q 001922 555 LNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLCGTL 614 (995)
Q Consensus 555 L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~ 614 (995)
|+|++|++++. | +..+++|+.|++++|++++..+. ..+..+....+.+++..|+.+
T Consensus 329 L~L~~N~l~~~-~--~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~ 384 (597)
T 3oja_B 329 LYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKID 384 (597)
T ss_dssp EECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTT
T ss_pred EECCCCCCCCc-C--hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcc
Confidence 99999999774 3 77889999999999999875432 234556666788999999964
No 271
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=340.39 Aligned_cols=257 Identities=24% Similarity=0.292 Sum_probs=185.7
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEe--------cC
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCS--------NK 755 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~--------~~ 755 (995)
.+|+..++||+|+||.||+|++ .+++.||+|++... .......+.+|+.+++++. ||||+++++++. ..
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN-EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES-SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC-chHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 4688899999999999999986 46899999998433 2334566889999999996 999999999983 33
Q ss_pred CcceEEEEeccCCChhhhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecc
Q 001922 756 ETNLLVYEYMRNGSLGEALHG-KKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGL 834 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~~l~~-~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGl 834 (995)
...++||||+. |+|.+++.. .....+++..++.++.||+.||.|||+.+ ++|+||||||+||+++.++.+||+|||+
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-~~ivH~Dikp~NIl~~~~~~~kl~Dfg~ 184 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK-PPIIHRDLKVENLLLSNQGTIKLCDFGS 184 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSS-SCCBCCCCCGGGCEECTTSCEEBCCCTT
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCC-CCEEEccCCcccEEECCCCCEEEecCcc
Confidence 45799999996 699998864 23456999999999999999999999542 2399999999999999999999999999
Q ss_pred ccccccCCCCc----------cccccccCccccccccc---ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHH
Q 001922 835 AKFLIDGGASE----------CMSAIAGSYGYIAPEYA---YTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQ 901 (995)
Q Consensus 835 a~~~~~~~~~~----------~~~~~~gt~~y~aPE~~---~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~ 901 (995)
++......... ......||+.|+|||++ .+..++.++||||||+++|||++|+.||.......
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~---- 260 (337)
T 3ll6_A 185 ATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR---- 260 (337)
T ss_dssp CBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----------
T ss_pred ceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH----
Confidence 98764322111 11245689999999998 56678999999999999999999999996432110
Q ss_pred HHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCC
Q 001922 902 WSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPR 963 (995)
Q Consensus 902 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~ 963 (995)
..... ... ..+...+..+.+++.+||+.||++||+++|+++.|+++..
T Consensus 261 ~~~~~-----------~~~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~ 308 (337)
T 3ll6_A 261 IVNGK-----------YSI---PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAA 308 (337)
T ss_dssp ----------------CCC---CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hhcCc-----------ccC---CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 00000 000 0111223457889999999999999999999999998865
No 272
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.2e-35 Score=338.10 Aligned_cols=265 Identities=20% Similarity=0.184 Sum_probs=202.8
Q ss_pred HHhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CC-----CceeEeEEEecCC
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HR-----NIVRLLAFCSNKE 756 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hp-----niv~~~~~~~~~~ 756 (995)
+.++|+..+.||+|+||+||+|+.. +++.||||++... ......+..|+.+++.++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK--KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS--HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc--HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3578999999999999999999764 6888999998532 223456778888888885 44 4999999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC--CCCCeEEeeecc
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN--SAFEAHVADFGL 834 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~--~~~~vkl~DfGl 834 (995)
..++||||+. |+|.+++.......+++..++.++.|++.||.|||.+ ..+|+||||||+||+++ .++.+||+|||+
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~ 207 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGS 207 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTT
T ss_pred ceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccC
Confidence 9999999996 5999999866556799999999999999999999942 23399999999999995 477899999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEF 914 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~ 914 (995)
++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||........+...............
T Consensus 208 a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~ 282 (382)
T 2vx3_A 208 SCQLGQR-----IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHIL 282 (382)
T ss_dssp CEETTCC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHH
T ss_pred ceecccc-----cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 9876322 23467899999999999999999999999999999999999999764333223222222111110000
Q ss_pred ------hhhc----CC--------------------------------------cCCCCCHHHHHHHHHHHhcccCCCCC
Q 001922 915 ------LSIL----DP--------------------------------------RLSMVPKEEAMHLLFVAMLCIQENSI 946 (995)
Q Consensus 915 ------~~~~----d~--------------------------------------~~~~~~~~~~~~l~~li~~cl~~dP~ 946 (995)
...+ +. ............+.+++.+||+.||+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~ 362 (382)
T 2vx3_A 283 DQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPK 362 (382)
T ss_dssp TTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTT
T ss_pred HhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChh
Confidence 0000 00 00011234456889999999999999
Q ss_pred CCCCHHHHHHH
Q 001922 947 ERPRMREVVQM 957 (995)
Q Consensus 947 ~RPt~~evl~~ 957 (995)
+|||++|+++.
T Consensus 363 ~Rpta~e~L~h 373 (382)
T 2vx3_A 363 TRIQPYYALQH 373 (382)
T ss_dssp TSCCHHHHTTS
T ss_pred hCCCHHHHhcC
Confidence 99999999863
No 273
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-36 Score=336.83 Aligned_cols=264 Identities=19% Similarity=0.258 Sum_probs=193.7
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEe----------
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCS---------- 753 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~---------- 753 (995)
..+|+..+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++||||+++++++.
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 88 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT-DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV 88 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC-SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC-ChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence 467889999999999999999875 4899999998532 3334567889999999999999999999873
Q ss_pred ----cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCCeE
Q 001922 754 ----NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-SAFEAH 828 (995)
Q Consensus 754 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-~~~~vk 828 (995)
+....++||||++ |+|.+++.. ..+++..++.++.|++.||+|||+++ |+||||||+||+++ +++.+|
T Consensus 89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~k 161 (320)
T 2i6l_A 89 GSLTELNSVYIVQEYME-TDLANVLEQ---GPLLEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANLFINTEDLVLK 161 (320)
T ss_dssp --CCSCSEEEEEEECCS-EEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT---CBCCCCSGGGEEEETTTTEEE
T ss_pred ccccccCceeEEeeccC-CCHHHHhhc---CCccHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCeEE
Confidence 3467799999997 599999953 45889999999999999999999887 99999999999997 567999
Q ss_pred EeeeccccccccCCC-CccccccccCccccccccccc-CCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHH
Q 001922 829 VADFGLAKFLIDGGA-SECMSAIAGSYGYIAPEYAYT-LRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRA 906 (995)
Q Consensus 829 l~DfGla~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~ 906 (995)
|+|||+++....... ........+|+.|+|||.+.+ ..++.++||||+|+++|||++|+.||................
T Consensus 162 l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 241 (320)
T 2i6l_A 162 IGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESI 241 (320)
T ss_dssp ECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHS
T ss_pred EccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 999999987543211 112234567999999998765 678999999999999999999999997643322222222221
Q ss_pred hcCChhhhhhhcC------------CcC--CCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 907 TNGRKEEFLSILD------------PRL--SMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 907 ~~~~~~~~~~~~d------------~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.........+... +.. .......+..+.+++.+||+.||++||+++|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 242 PVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp CCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred CCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 1111111111000 000 0011234567899999999999999999999986
No 274
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=4.5e-36 Score=334.25 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=179.2
Q ss_pred hhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHH-HHhccCCCCceeEeEEEecCCcceEEEE
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQ-TLGNIRHRNIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~lv~e 763 (995)
++|+..+.||+|+||.||+|... +|+.||||++...........+..|+. +++.++||||+++++++.+.+..++|||
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57888999999999999999874 689999999965443333445556665 6777899999999999999999999999
Q ss_pred eccCCChhhhhcC---CCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCCCeEEeeeccccccc
Q 001922 764 YMRNGSLGEALHG---KKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLI 839 (995)
Q Consensus 764 ~~~~gsL~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~ 839 (995)
|+++ +|.+++.. .....+++..+..++.|++.||.|||+. + |+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 102 LMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLK---IIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp CCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHS---CCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred ecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCC---EeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9985 88777752 2356789999999999999999999987 7 9999999999999999999999999998764
Q ss_pred cCCCCccccccccCccccccccc----ccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 840 DGGASECMSAIAGSYGYIAPEYA----YTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 840 ~~~~~~~~~~~~gt~~y~aPE~~----~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
... ......||+.|+|||++ .+..++.++||||||+++|+|++|+.||......... .......
T Consensus 178 ~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~------ 245 (327)
T 3aln_A 178 DSI---AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQ---LTQVVKG------ 245 (327)
T ss_dssp -------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC----------CCCCCS------
T ss_pred ccc---ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHH---HHHHhcC------
Confidence 322 22334799999999998 4567899999999999999999999999653221110 0000000
Q ss_pred hhcCCcCC-CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 916 SILDPRLS-MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 916 ~~~d~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
..+.+. ......+..+.+++.+||+.||++||+++|+++
T Consensus 246 --~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 246 --DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp --CCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred --CCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 001111 111234567899999999999999999999986
No 275
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=1.3e-35 Score=339.16 Aligned_cols=346 Identities=17% Similarity=0.140 Sum_probs=180.0
Q ss_pred CCCCCCCCCCCCce-eeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccc
Q 001922 46 LISWNSSNPSSVCS-WAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNIS 122 (995)
Q Consensus 46 l~~W~~~~~~~~C~-w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls 122 (995)
+++|... .+||. |.+..|....+. ++-..... .....-..+++++.|++++|.++... .+..+++|++|+|+
T Consensus 3 ~~~~~~~--~~C~~~~~~~~c~~~~~~-i~~~~~~~--~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPE--YKCIDSNLQYDCVFYDVH-IDMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCE--ECBCC------EEEESCE-ECSSCCCC--EESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCc--cceehhhhhhccceeeee-eecccccc--cccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 6789875 35654 555555322111 11111111 11111234567777777777776543 25677777777777
Q ss_pred cccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccC
Q 001922 123 NNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKI 202 (995)
Q Consensus 123 ~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 202 (995)
+|.++++.+..|..+++|++|++++|+++++.|..|.++++|++|+|++|.++...+..|+.+++|++|+|++|++++..
T Consensus 78 ~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~ 157 (390)
T 3o6n_A 78 DLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIE 157 (390)
T ss_dssp TSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCC
T ss_pred CCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccC
Confidence 77777777777777777777777777777776777777777777777777776444444577777777777777777666
Q ss_pred cccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCc
Q 001922 203 PGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNL 282 (995)
Q Consensus 203 ~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 282 (995)
+..++++++|++|++++|.+... .+..+++|++|++++|.+++ +...+.|+.|++++|.++.. |.. ..
T Consensus 158 ~~~~~~l~~L~~L~l~~n~l~~~----~~~~l~~L~~L~l~~n~l~~-----~~~~~~L~~L~l~~n~l~~~-~~~--~~ 225 (390)
T 3o6n_A 158 DDTFQATTSLQNLQLSSNRLTHV----DLSLIPSLFHANVSYNLLST-----LAIPIAVEELDASHNSINVV-RGP--VN 225 (390)
T ss_dssp TTTTSSCTTCCEEECCSSCCSBC----CGGGCTTCSEEECCSSCCSE-----EECCSSCSEEECCSSCCCEE-ECC--CC
T ss_pred hhhccCCCCCCEEECCCCcCCcc----ccccccccceeecccccccc-----cCCCCcceEEECCCCeeeec-ccc--cc
Confidence 66666666666666655444321 23444555555555555542 12223455555555555432 211 12
Q ss_pred CCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEe
Q 001922 283 TNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDL 362 (995)
Q Consensus 283 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 362 (995)
++|+.|++++|.+++. ..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|
T Consensus 226 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L 302 (390)
T 3o6n_A 226 VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDL 302 (390)
T ss_dssp SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEEC
T ss_pred ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEEC
Confidence 4455555555555432 244444555555555555554444445555555555555555543 2333344445555555
Q ss_pred cCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCcc
Q 001922 363 SSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYL 415 (995)
Q Consensus 363 ~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l 415 (995)
++|+++ .+|..+..+++|+.|++++|.+... + +..+++|+.|++++|++
T Consensus 303 ~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~ 351 (390)
T 3o6n_A 303 SHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDW 351 (390)
T ss_dssp CSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCE
T ss_pred CCCcce-ecCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCc
Confidence 555444 3333344444444444444444322 1 33334444444444444
No 276
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=1.8e-35 Score=333.46 Aligned_cols=260 Identities=20% Similarity=0.246 Sum_probs=202.5
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CC-cEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC------ceeEeEEEecCC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NG-VEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN------IVRLLAFCSNKE 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn------iv~~~~~~~~~~ 756 (995)
.++|+..+.||+|+||+||+|... ++ +.||+|++.. .....+.+.+|+.++++++|++ ++.+++++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN--VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc--cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 467899999999999999999764 34 6899999853 2233566888999999998766 899999999999
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEE---------------
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILL--------------- 821 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill--------------- 821 (995)
..++||||+ ++++.+++.......+++..++.++.||+.||.|||+++ |+||||||+||++
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~~~~~~~~~~ 171 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ---LTHTDLKPENILFVNSEFETLYNEHKSC 171 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTT---EECCCCCGGGEEESCCCEEEEECCC-CC
T ss_pred eEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecccccccccccccc
Confidence 999999999 668888776555567999999999999999999999777 9999999999999
Q ss_pred ----CCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCc
Q 001922 822 ----NSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGV 897 (995)
Q Consensus 822 ----~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~ 897 (995)
+.++.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||.......
T Consensus 172 ~~~~~~~~~~kl~Dfg~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~ 246 (355)
T 2eu9_A 172 EEKSVKNTSIRVADFGSATFDHEH-----HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246 (355)
T ss_dssp CEEEESCCCEEECCCTTCEETTSC-----CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred cccccCCCcEEEeecCcccccccc-----ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 56789999999999864322 234579999999999999999999999999999999999999997543322
Q ss_pred hHHHHHHHHhcCChhhhhhh---------------------------cCC--cCCCCCHHHHHHHHHHHhcccCCCCCCC
Q 001922 898 DIVQWSKRATNGRKEEFLSI---------------------------LDP--RLSMVPKEEAMHLLFVAMLCIQENSIER 948 (995)
Q Consensus 898 ~~~~~~~~~~~~~~~~~~~~---------------------------~d~--~~~~~~~~~~~~l~~li~~cl~~dP~~R 948 (995)
....... ........+... ..+ .........+..+.+++.+||+.||++|
T Consensus 247 ~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~R 325 (355)
T 2eu9_A 247 HLVMMEK-ILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQR 325 (355)
T ss_dssp HHHHHHH-HHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTS
T ss_pred HHHHHHH-HcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhC
Confidence 2222222 111111110000 000 0011223456789999999999999999
Q ss_pred CCHHHHHH
Q 001922 949 PRMREVVQ 956 (995)
Q Consensus 949 Pt~~evl~ 956 (995)
||++|+++
T Consensus 326 pt~~e~l~ 333 (355)
T 2eu9_A 326 ITLAEALL 333 (355)
T ss_dssp CCHHHHTT
T ss_pred cCHHHHhc
Confidence 99999985
No 277
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=6.8e-36 Score=339.38 Aligned_cols=260 Identities=20% Similarity=0.226 Sum_probs=201.5
Q ss_pred hhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-----------CCCceeEeEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-----------HRNIVRLLAFCS 753 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------hpniv~~~~~~~ 753 (995)
.+|+..+.||+|+||+||+|+. .+++.||||++.. .....+.+.+|+.++++++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG--DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS--CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC--CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 4688899999999999999986 5689999999853 2233566888999998886 899999999987
Q ss_pred cCC----cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEEC------
Q 001922 754 NKE----TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLN------ 822 (995)
Q Consensus 754 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~------ 822 (995)
..+ ..++||||+ +++|.+++.......+++..+..++.||+.||+|||++ + |+||||||+||+++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~---ivH~Dikp~NIll~~~~~~~ 172 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG---IIHTDIKPENVLMEIVDSPE 172 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTC---EECSCCSGGGEEEEEEETTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCC---EEecCCChHHeEEeccCCCc
Confidence 544 789999999 88999999866666799999999999999999999987 7 99999999999994
Q ss_pred CCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCC------
Q 001922 823 SAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDG------ 896 (995)
Q Consensus 823 ~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~------ 896 (995)
..+.+||+|||+++..... .....||+.|+|||++.+..++.++||||+||++|||++|+.||......
T Consensus 173 ~~~~~kl~Dfg~a~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 173 NLIQIKIADLGNACWYDEH-----YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TEEEEEECCCTTCEETTBC-----CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred CcceEEEcccccccccCCC-----CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 4457999999999875332 23457899999999999999999999999999999999999999753311
Q ss_pred chHHHHHHHHhcCChhhhh-------hhcC--------------------CcCCCCCHHHHHHHHHHHhcccCCCCCCCC
Q 001922 897 VDIVQWSKRATNGRKEEFL-------SILD--------------------PRLSMVPKEEAMHLLFVAMLCIQENSIERP 949 (995)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~-------~~~d--------------------~~~~~~~~~~~~~l~~li~~cl~~dP~~RP 949 (995)
....+........ ...+. ..++ ......+...+..+.+++.+||+.||++||
T Consensus 248 ~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 326 (373)
T 1q8y_A 248 DHIAQIIELLGEL-PSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRA 326 (373)
T ss_dssp HHHHHHHHHHCSC-CHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCB
T ss_pred HHHHHHHHhcCCC-CHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccC
Confidence 1111111111110 00000 0000 001134567889999999999999999999
Q ss_pred CHHHHHHH
Q 001922 950 RMREVVQM 957 (995)
Q Consensus 950 t~~evl~~ 957 (995)
|++|+++.
T Consensus 327 t~~ell~h 334 (373)
T 1q8y_A 327 DAGGLVNH 334 (373)
T ss_dssp CHHHHHTC
T ss_pred CHHHHhhC
Confidence 99999874
No 278
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=4.5e-36 Score=331.24 Aligned_cols=259 Identities=29% Similarity=0.503 Sum_probs=190.1
Q ss_pred CCCEEEccCCcCCC--CCCccccCCCCcceEEecc-CcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCcccee
Q 001922 308 QLKLFNLFMNRLHG--SIPDYLADLPNLETLGLWQ-NNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRIL 384 (995)
Q Consensus 308 ~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 384 (995)
+++.|+|++|.+++ .+|..+..+++|++|+|++ |.+++.+|..|+.+++|++|+|++|++++.+|..+.
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~-------- 122 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS-------- 122 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG--------
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh--------
Confidence 45566666666665 5555666666666666663 555555555566666666666666655555555444
Q ss_pred eccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCC
Q 001922 385 ILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNN 464 (995)
Q Consensus 385 ~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N 464 (995)
.+++|++|++++|.+.+.+|..+..+ ++|++|+|++|
T Consensus 123 ----------------~l~~L~~L~Ls~N~l~~~~p~~~~~l---------------------------~~L~~L~L~~N 159 (313)
T 1ogq_A 123 ----------------QIKTLVTLDFSYNALSGTLPPSISSL---------------------------PNLVGITFDGN 159 (313)
T ss_dssp ----------------GCTTCCEEECCSSEEESCCCGGGGGC---------------------------TTCCEEECCSS
T ss_pred ----------------CCCCCCEEeCCCCccCCcCChHHhcC---------------------------CCCCeEECcCC
Confidence 44455555555555554455444333 23445555555
Q ss_pred cccccCCccccCCC-CCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCc
Q 001922 465 LLSGPLPFSLSNFS-SLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIP 543 (995)
Q Consensus 465 ~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 543 (995)
++++.+|..+..++ +|+.|+|++|++++.+|..++.+. |+.|+|++|.+++.+|..++.+++|++|+|++|++++.+|
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 238 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG 238 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGG
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecC
Confidence 55556666677776 788888888888877888888776 8888888888888888888889999999999999987666
Q ss_pred cccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCCCCCCCCCCC
Q 001922 544 PEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLCGTLLNNPCN 620 (995)
Q Consensus 544 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~~~~~c~ 620 (995)
. +..+++|++|+|++|++++.+|..+..+++|+.|++++|+++|.+|..+++..+....+.|||++||.|++ +|.
T Consensus 239 ~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C~ 313 (313)
T 1ogq_A 239 K-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-ACT 313 (313)
T ss_dssp G-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CCC
T ss_pred c-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CCC
Confidence 5 88889999999999999989999999999999999999999999998888888999999999999999888 674
No 279
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.1e-35 Score=356.00 Aligned_cols=348 Identities=17% Similarity=0.151 Sum_probs=192.1
Q ss_pred CCCCCCCCCCCCCCce----eeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccc
Q 001922 44 PALISWNSSNPSSVCS----WAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQ 117 (995)
Q Consensus 44 ~~l~~W~~~~~~~~C~----w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~ 117 (995)
..+++|.++ ++||. |.++.|+. + ++......... ..-..+.+++.|++++|.++... .+.++++|+
T Consensus 7 ~~l~~~~~~--~~C~~~~~~~~c~~~~~-~---i~~~~~~~~~~--~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 7 YNVKPRQPE--YKCIDSNLQYDCVFYDV-H---IDMQTQDVYFG--FEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ----CCCSE--ECCCCC--CCSEEECSC-E---ECSSCCCCEES--CSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred ccccCCCCC--CcCcccCcCceeEecCc-e---ecccccccccC--cccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 457889875 35663 66666542 1 11111111111 11123456666666666665533 255566666
Q ss_pred eeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCc
Q 001922 118 FLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGND 197 (995)
Q Consensus 118 ~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~ 197 (995)
+|+|++|.|+++++..|..+++|++|+|++|.|+++.|..|+++++|++|+|++|.+++..+..|+.+++|++|+|++|.
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~ 158 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNN 158 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCc
Confidence 66666666666666666666666666666666666655566666666666666666654444445666666666666666
Q ss_pred ccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCc
Q 001922 198 LTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPK 277 (995)
Q Consensus 198 l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~ 277 (995)
+++..|..|+++++| ++|+|++|.+++. .++.+++|+.|++++|.+++
T Consensus 159 l~~~~~~~~~~l~~L-------------------------~~L~L~~N~l~~~---~~~~l~~L~~L~l~~n~l~~---- 206 (597)
T 3oja_B 159 LERIEDDTFQATTSL-------------------------QNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLST---- 206 (597)
T ss_dssp CCBCCTTTTTTCTTC-------------------------CEEECTTSCCSBC---CGGGCTTCSEEECCSSCCSE----
T ss_pred CCCCChhhhhcCCcC-------------------------cEEECcCCCCCCc---ChhhhhhhhhhhcccCcccc----
Confidence 665555555555444 4455555544432 13334445555555554442
Q ss_pred cccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCC
Q 001922 278 QLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKL 357 (995)
Q Consensus 278 ~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 357 (995)
+...++|+.|++++|.++...+.. .++|+.|+|++|.+++ +..+..+++|+.|+|++|.+++..|..|+.+++|
T Consensus 207 -l~~~~~L~~L~ls~n~l~~~~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 280 (597)
T 3oja_B 207 -LAIPIAVEELDASHNSINVVRGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRL 280 (597)
T ss_dssp -EECCTTCSEEECCSSCCCEEECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSC
T ss_pred -ccCCchhheeeccCCccccccccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCC
Confidence 223345566666666555332221 1456666666666654 2455566666666666666666656666666666
Q ss_pred CeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCc
Q 001922 358 QVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSN 437 (995)
Q Consensus 358 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n 437 (995)
++|+|++|.+++ +|..+..+++|+.|+|++|.+. .+|..+..+++|+.|++++|.+.+.. +..++.|+.+++++|
T Consensus 281 ~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N 355 (597)
T 3oja_B 281 ERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHN 355 (597)
T ss_dssp CEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSS
T ss_pred CEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCC
Confidence 666666666653 4555555666666666666664 35555666666666666666665442 445566667777777
Q ss_pred cccCC
Q 001922 438 YLSGS 442 (995)
Q Consensus 438 ~l~~~ 442 (995)
.+.+.
T Consensus 356 ~~~~~ 360 (597)
T 3oja_B 356 DWDCN 360 (597)
T ss_dssp CEEHH
T ss_pred CCCCh
Confidence 66643
No 280
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=1.3e-35 Score=342.84 Aligned_cols=252 Identities=24% Similarity=0.318 Sum_probs=188.1
Q ss_pred hhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEEEEe
Q 001922 686 ECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLVYEY 764 (995)
Q Consensus 686 ~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~ 764 (995)
+.|...+.||+|+||+||.+...+|+.||||++.. ...+.+.+|+++++++ +||||+++++++.+++..|+||||
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~----~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~ 90 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLI----DFCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALEL 90 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEG----GGHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECC
T ss_pred heeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcH----HHHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEec
Confidence 34556788999999999877667899999999843 2245678899999886 899999999999999999999999
Q ss_pred ccCCChhhhhcCCCCCC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCC-------------CC
Q 001922 765 MRNGSLGEALHGKKGAF-----LGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSA-------------FE 826 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~-----~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~-------------~~ 826 (995)
+. |+|.+++....... .++..++.++.||+.||+|||+.+ |+||||||+||+++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCC---ccccCCChHhEEEecCcccccccccCCCceE
Confidence 96 59999997533211 122345679999999999999887 9999999999999754 48
Q ss_pred eEEeeeccccccccCCCC--ccccccccCccccccccccc-------CCCCcccchhhHHHHHHHHHh-CCCCCCCCCCC
Q 001922 827 AHVADFGLAKFLIDGGAS--ECMSAIAGSYGYIAPEYAYT-------LRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDG 896 (995)
Q Consensus 827 vkl~DfGla~~~~~~~~~--~~~~~~~gt~~y~aPE~~~~-------~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~ 896 (995)
+||+|||+++.+...... .......||+.|+|||++.+ ..++.++||||+||++|||++ |+.||.+....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876543221 12234679999999999865 568999999999999999999 99999653221
Q ss_pred chHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 897 VDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 897 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
.......... ........+...+..+.+++.+||+.||++||++.|+++
T Consensus 247 --~~~i~~~~~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 --ESNIIRGIFS---------LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp --HHHHHHTCCC---------CCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred --HHHHhcCCCC---------cccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1111110000 001111234567889999999999999999999999986
No 281
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=341.62 Aligned_cols=248 Identities=24% Similarity=0.293 Sum_probs=185.8
Q ss_pred hccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEEEEec
Q 001922 687 CVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLVYEYM 765 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~e~~ 765 (995)
.|+..++||+|+||+||.....+++.||||++.... ...+.+|+++++++ +|||||++++++.+....|+||||+
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~----~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC----FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT----EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH----HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 577788999999999766556689999999985322 23356899999999 7999999999999999999999999
Q ss_pred cCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC-----CCCeEEeeecccccccc
Q 001922 766 RNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS-----AFEAHVADFGLAKFLID 840 (995)
Q Consensus 766 ~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~-----~~~vkl~DfGla~~~~~ 840 (995)
. |+|.+++.... ....+..++.++.||+.||.|||+.+ |+||||||+||+++. ...+||+|||+++....
T Consensus 101 ~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~ 175 (432)
T 3p23_A 101 A-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLN---IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175 (432)
T ss_dssp S-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTT---CCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC--
T ss_pred C-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCc---CEeCCCCHHHEEEecCCCCCceeEEEecccceeeccC
Confidence 6 59999997543 23444456789999999999999887 999999999999953 23588999999987643
Q ss_pred CCC-CccccccccCcccccccccc---cCCCCcccchhhHHHHHHHHHh-CCCCCCCCCCCchHHHHHHHHhcCChhhhh
Q 001922 841 GGA-SECMSAIAGSYGYIAPEYAY---TLRVDEKSDVYSFGVVLLELLT-GRRPVGDFGDGVDIVQWSKRATNGRKEEFL 915 (995)
Q Consensus 841 ~~~-~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DvwSlGvil~ellt-g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (995)
... ........||+.|+|||++. ...++.++||||+||++|||++ |..||..... .... .....
T Consensus 176 ~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~--~~~~---~~~~~------ 244 (432)
T 3p23_A 176 GRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ--RQAN---ILLGA------ 244 (432)
T ss_dssp ----------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT--HHHH---HHTTC------
T ss_pred CCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH--HHHH---HHhcc------
Confidence 321 12234567999999999987 4567889999999999999999 9999854221 1111 11100
Q ss_pred hhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 916 SILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 916 ~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
............+..+.+++.+||+.||++||+++|+++
T Consensus 245 --~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 245 --CSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp --CCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred --CCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 001111123345667889999999999999999999985
No 282
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=328.49 Aligned_cols=253 Identities=22% Similarity=0.336 Sum_probs=181.0
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCChhH-HHHHHHHHHhccCCCCceeEeEEEecCCcceEEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHSHDH-GFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.++|+..+.||+|+||.||+|+.. +|+.||||++.......... .+.++..+++.++||||+++++++.+.+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 467888899999999999999874 68999999986543332222 3444556788889999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHD-CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
||+ ++.+..+.. .....+++..++.++.|++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 104 e~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 178 (318)
T 2dyl_A 104 ELM-GTCAEKLKK-RMQGPIPERILGKMTVAIVKALYYLKEKHG---VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD 178 (318)
T ss_dssp CCC-SEEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHHHC---CCCCCCCGGGEEECTTSCEEECCCTTC------
T ss_pred ecc-CCcHHHHHH-HhccCCCHHHHHHHHHHHHHHHHHHHhhCC---EEeCCCCHHHEEECCCCCEEEEECCCchhccCC
Confidence 999 445555543 3345689999999999999999999984 7 999999999999999999999999999765432
Q ss_pred CCCccccccccCcccccccccc-----cCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhh
Q 001922 842 GASECMSAIAGSYGYIAPEYAY-----TLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLS 916 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 916 (995)
. ......||+.|+|||++. ...++.++||||+|+++|||++|+.||.......... ........
T Consensus 179 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~---~~~~~~~~----- 247 (318)
T 2dyl_A 179 K---AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVL---TKVLQEEP----- 247 (318)
T ss_dssp -----------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHH---HHHHHSCC-----
T ss_pred c---cccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHH---HHHhccCC-----
Confidence 2 223457999999999984 4568899999999999999999999997543322211 11111110
Q ss_pred hcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 917 ILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 917 ~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
+..+ .....+..+.+++.+||+.||++||+++|+++.
T Consensus 248 ---~~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h 284 (318)
T 2dyl_A 248 ---PLLP-GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEH 284 (318)
T ss_dssp ---CCCC-SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ---CCCC-ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 0111 111245578899999999999999999999863
No 283
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=4.5e-36 Score=332.83 Aligned_cols=242 Identities=20% Similarity=0.336 Sum_probs=197.6
Q ss_pred HhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCC-----hhHHHHHHHHHHhccC--CCCceeEeEEEecCC
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHS-----HDHGFRAEIQTLGNIR--HRNIVRLLAFCSNKE 756 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~~ 756 (995)
.++|+..+.||+|+||.||+|+. .+++.||||++....... ....+.+|+.++++++ ||||+++++++.+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 45788999999999999999975 568899999985432221 2245678999999996 599999999999999
Q ss_pred cceEEEEeccC-CChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCCeEEeeecc
Q 001922 757 TNLLVYEYMRN-GSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-SAFEAHVADFGL 834 (995)
Q Consensus 757 ~~~lv~e~~~~-gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-~~~~vkl~DfGl 834 (995)
..++||||+.+ ++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+||+++ .++.+||+|||+
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITE--RGALQEELARSFFWQVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred cEEEEEEcCCCCccHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 99999999976 899999964 356899999999999999999999887 99999999999999 788999999999
Q ss_pred ccccccCCCCccccccccCcccccccccccCCC-CcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 835 AKFLIDGGASECMSAIAGSYGYIAPEYAYTLRV-DEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 835 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
++..... ......||+.|+|||++.+..+ +.++||||||+++|||++|+.||... . ... ...
T Consensus 197 ~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~----~--~~~---~~~---- 259 (320)
T 3a99_A 197 GALLKDT----VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD----E--EII---RGQ---- 259 (320)
T ss_dssp CEECCSS----CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH----H--HHH---HCC----
T ss_pred ccccccc----cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh----h--hhh---ccc----
Confidence 9876432 2234579999999999887766 68899999999999999999999531 0 000 000
Q ss_pred hhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 914 FLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 914 ~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 260 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h 294 (320)
T 3a99_A 260 ---------VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQNH 294 (320)
T ss_dssp ---------CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred ---------ccccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122345578899999999999999999999873
No 284
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.9e-36 Score=329.13 Aligned_cols=245 Identities=22% Similarity=0.326 Sum_probs=191.3
Q ss_pred HHHHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC-----ChhHHHHHHHHHHhcc----CCCCceeEeEE
Q 001922 682 SDILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH-----SHDHGFRAEIQTLGNI----RHRNIVRLLAF 751 (995)
Q Consensus 682 ~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l----~hpniv~~~~~ 751 (995)
+.+.++|+..+.||+|+||.||+|+. .+++.||||++...... .....+.+|+.+++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34567899999999999999999976 46889999998543221 1223356799999888 89999999999
Q ss_pred EecCCcceEEEEe-ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEEC-CCCCeEE
Q 001922 752 CSNKETNLLVYEY-MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLN-SAFEAHV 829 (995)
Q Consensus 752 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~-~~~~vkl 829 (995)
+.+.+..++|||| +.+++|.+++.. ...+++..++.++.|++.||.|||+.+ |+||||||+||+++ .++.+||
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~kl 181 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE--KGPLGEGPSRCFFGQVVAAIQHCHSRG---VVHRDIKDENILIDLRRGCAKL 181 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH--HCSCCHHHHHHHHHHHHHHHHHHHHHT---EECCCCSGGGEEEETTTTEEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChhhEEEeCCCCeEEE
Confidence 9999999999999 789999999964 346899999999999999999999888 99999999999999 8899999
Q ss_pred eeeccccccccCCCCccccccccCcccccccccccCCCC-cccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhc
Q 001922 830 ADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVD-EKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATN 908 (995)
Q Consensus 830 ~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~ 908 (995)
+|||+++...... .....|++.|+|||++.+..+. .++||||+|+++|||++|+.||... ... ..
T Consensus 182 ~dfg~~~~~~~~~----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~------~~~----~~ 247 (312)
T 2iwi_A 182 IDFGSGALLHDEP----YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD------QEI----LE 247 (312)
T ss_dssp CCCSSCEECCSSC----BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHH----HH
T ss_pred EEcchhhhcccCc----ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh------HHH----hh
Confidence 9999998764322 2345789999999998877664 5899999999999999999999531 000 00
Q ss_pred CChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 909 GRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 909 ~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
. . ...+...+..+.+++.+||+.||++||+++|+++.
T Consensus 248 ~-----------~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 248 A-----------E-LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp T-----------C-CCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred h-----------c-cCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 11223345678899999999999999999999874
No 285
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.2e-35 Score=351.33 Aligned_cols=261 Identities=24% Similarity=0.289 Sum_probs=199.3
Q ss_pred HHhhccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEec------CC
Q 001922 684 ILECVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSN------KE 756 (995)
Q Consensus 684 ~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~ 756 (995)
...+|+..+.||+|+||+||+|.. .+|+.||||++.........+.+.+|++++++++||||+++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 357899999999999999999976 46899999998654444456678999999999999999999999765 67
Q ss_pred cceEEEEeccCCChhhhhcCCC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCC---eEEeee
Q 001922 757 TNLLVYEYMRNGSLGEALHGKK-GAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFE---AHVADF 832 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~---vkl~Df 832 (995)
..++||||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~g---IVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTT---BCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHeEeecCCCceeEEEccc
Confidence 7899999999999999997532 336888899999999999999999887 999999999999997765 899999
Q ss_pred ccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChh
Q 001922 833 GLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKE 912 (995)
Q Consensus 833 Gla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~ 912 (995)
|++....... ......||+.|+|||++.+..++.++||||+|+++|+|++|+.||.... ....|..........
T Consensus 169 G~a~~~~~~~---~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~---~~~~~~~~i~~~~~~ 242 (676)
T 3qa8_A 169 GYAKELDQGE---LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNW---QPVQWHGKVREKSNE 242 (676)
T ss_dssp CCCCBTTSCC---CCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSC---HHHHSSTTCC-----
T ss_pred cccccccccc---ccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCccc---chhhhhhhhhcccch
Confidence 9998764432 2244679999999999999999999999999999999999999996421 112221111110000
Q ss_pred h--hhhhcC---------CcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHH
Q 001922 913 E--FLSILD---------PRLSMVPKEEAMHLLFVAMLCIQENSIERPRMRE 953 (995)
Q Consensus 913 ~--~~~~~d---------~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 953 (995)
. ..+... +.........+..+.+++.+||+.||++|||++|
T Consensus 243 ~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~e 294 (676)
T 3qa8_A 243 HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQ 294 (676)
T ss_dssp -CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTT
T ss_pred hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHH
Confidence 0 000000 1112244567889999999999999999999977
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=9.1e-34 Score=318.45 Aligned_cols=304 Identities=23% Similarity=0.334 Sum_probs=133.0
Q ss_pred CCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeec
Q 001922 90 RLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDL 169 (995)
Q Consensus 90 ~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L 169 (995)
.+++|++|++++|.++....+..+++|++|+|++|++++..+ +..+++|++|++++|.++.+ ..+..+++|++|++
T Consensus 42 ~l~~L~~L~l~~~~i~~~~~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~--~~~~~l~~L~~L~l 117 (347)
T 4fmz_A 42 ELESITKLVVAGEKVASIQGIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI--SALQNLTNLRELYL 117 (347)
T ss_dssp HHTTCSEEECCSSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCSEEEC
T ss_pred hcccccEEEEeCCccccchhhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc--hHHcCCCcCCEEEC
Confidence 345555555555555544445555555555555555554433 55555555555555555542 23555555555555
Q ss_pred cCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCC
Q 001922 170 GGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDG 249 (995)
Q Consensus 170 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 249 (995)
++|.+++ ++. +..+++|++|++++|.....++ .+..+++|++|++++|.+.. ++. +..+++|++|++++|.+++
T Consensus 118 ~~n~i~~-~~~-~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~--~~~-~~~l~~L~~L~l~~n~l~~ 191 (347)
T 4fmz_A 118 NEDNISD-ISP-LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKD--VTP-IANLTDLYSLSLNYNQIED 191 (347)
T ss_dssp TTSCCCC-CGG-GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCC--CGG-GGGCTTCSEEECTTSCCCC
T ss_pred cCCcccC-chh-hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCC--chh-hccCCCCCEEEccCCcccc
Confidence 5555542 222 5555555555555554332222 13333333333333332221 111 3334444444444444442
Q ss_pred ccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccC
Q 001922 250 QIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLAD 329 (995)
Q Consensus 250 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 329 (995)
..+ +..+++|+.|++++|.+++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++. +.+..
T Consensus 192 ~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~ 263 (347)
T 4fmz_A 192 ISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKD 263 (347)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTT
T ss_pred ccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhc
Confidence 221 3444444444444444443222 3444444444444444443222 44444444444444444421 23444
Q ss_pred CCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEE
Q 001922 330 LPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVR 409 (995)
Q Consensus 330 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 409 (995)
+++|++|++++|++++. ..+..+++|++|++++|++++..|..+..+++|+.|++++|.+.+..| +..+++|++|+
T Consensus 264 l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~ 339 (347)
T 4fmz_A 264 LTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSAD 339 (347)
T ss_dssp CTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEES
T ss_pred CCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceee
Confidence 44444444444444432 224444444444444444444333334444444444444444433333 33344444444
Q ss_pred ecCCcc
Q 001922 410 LGQNYL 415 (995)
Q Consensus 410 l~~N~l 415 (995)
+++|.|
T Consensus 340 l~~N~i 345 (347)
T 4fmz_A 340 FANQVI 345 (347)
T ss_dssp SSCC--
T ss_pred hhhhcc
Confidence 444433
No 287
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=1.5e-33 Score=316.57 Aligned_cols=317 Identities=25% Similarity=0.329 Sum_probs=244.5
Q ss_pred ccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccC
Q 001922 99 LAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKI 178 (995)
Q Consensus 99 L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 178 (995)
+....+++...+..+++|++|++++|.+.... .+..+++|++|++++|+++++.+ +..+++|++|+|++|.+++ +
T Consensus 29 ~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~ 103 (347)
T 4fmz_A 29 LQKASVTDVVTQEELESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-I 103 (347)
T ss_dssp HTCSCTTSEECHHHHTTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C
T ss_pred ccccccCCcccchhcccccEEEEeCCccccch--hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-c
Confidence 34445555566778999999999999998763 48889999999999999998644 8999999999999999974 4
Q ss_pred CccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCc
Q 001922 179 PNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNL 258 (995)
Q Consensus 179 p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 258 (995)
| .|..+++|++|++++|++++..+ +..+++|++|++++|.... .+..+..+++|++|++++|.+.+..+ +..+
T Consensus 104 ~-~~~~l~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~--~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l 176 (347)
T 4fmz_A 104 S-ALQNLTNLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLS--DLSPLSNMTGLNYLTVTESKVKDVTP--IANL 176 (347)
T ss_dssp G-GGTTCTTCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCC--CCGGGTTCTTCCEEECCSSCCCCCGG--GGGC
T ss_pred h-HHcCCCcCCEEECcCCcccCchh--hccCCceeEEECCCCCCcc--cccchhhCCCCcEEEecCCCcCCchh--hccC
Confidence 4 69999999999999999995533 8888999999998775554 23447888889999999988875544 7788
Q ss_pred cccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEe
Q 001922 259 KLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGL 338 (995)
Q Consensus 259 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 338 (995)
++|+.|++++|.+++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|++|++
T Consensus 177 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l 250 (347)
T 4fmz_A 177 TDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEI 250 (347)
T ss_dssp TTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEEC
Confidence 888888888888875433 7788888888888888886554 7788888888888888885444 778888888888
Q ss_pred ccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCC
Q 001922 339 WQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGS 418 (995)
Q Consensus 339 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 418 (995)
++|++++. ..+..+++|++|++++|++++. ..+..+++|+.|++++|.+.+..|..+..+++|++|++++|++++.
T Consensus 251 ~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~ 326 (347)
T 4fmz_A 251 GTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDI 326 (347)
T ss_dssp CSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCC
T ss_pred CCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccc
Confidence 88888753 4577888888888888888753 3467777777777777777777777777777777777777777765
Q ss_pred CCCCcccCCCCceeeccCccc
Q 001922 419 IPDGFIYLPGLNLAELQSNYL 439 (995)
Q Consensus 419 ~p~~~~~l~~L~~l~l~~n~l 439 (995)
.| +..+++|+.+++++|.|
T Consensus 327 ~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 327 RP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp GG--GGGCTTCSEESSSCC--
T ss_pred cC--hhhhhccceeehhhhcc
Confidence 55 44455444444444443
No 288
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=1.9e-34 Score=313.71 Aligned_cols=232 Identities=13% Similarity=0.077 Sum_probs=183.3
Q ss_pred HhhccCCCeeeccCceEEEEEEeC-CCcEEEEEEecCCCCCC--hhHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGTHS--HDHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
..+|+..+.||+|+||.||+|++. +++.||||++....... ....+.+|+.++++++||||+++++++.+.+..|+|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 357888999999999999999875 48999999986543322 236789999999999999999999999999999999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||++|++|.+++... .....+.+++.|++.||.|||+++ |+||||||+||+++.++.+||+++|
T Consensus 110 ~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~g---ivH~Dikp~NIll~~~g~~kl~~~~-------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAG---VALSIDHPSRVRVSIDGDVVLAYPA-------- 174 (286)
T ss_dssp EECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTT---CCCCCCSGGGEEEETTSCEEECSCC--------
T ss_pred EEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCC---CccCCCCcccEEEcCCCCEEEEecc--------
Confidence 9999999999999532 355567889999999999999887 9999999999999999999998443
Q ss_pred CCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCc
Q 001922 842 GASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPR 921 (995)
Q Consensus 842 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 921 (995)
|++ .++.++|||||||++|||++|+.||........+.... ......
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~------------~~~~~~ 221 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAE------------RDTAGQ 221 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECC------------BCTTSC
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHH------------HHhccC
Confidence 333 36889999999999999999999997643221110000 000000
Q ss_pred CC---CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHccCCCCC
Q 001922 922 LS---MVPKEEAMHLLFVAMLCIQENSIERPRMREVVQMLSEFPRHS 965 (995)
Q Consensus 922 ~~---~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~~L~~~~~~~ 965 (995)
.. ......+..+.+++.+||+.||++| |++|+++.|+++....
T Consensus 222 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~ 267 (286)
T 3uqc_A 222 PIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVA 267 (286)
T ss_dssp BCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC--
T ss_pred CCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccC
Confidence 00 0112345678999999999999999 9999999999987654
No 289
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=3.6e-34 Score=350.00 Aligned_cols=240 Identities=23% Similarity=0.240 Sum_probs=193.2
Q ss_pred HhhccCCCeeeccCceEEEEEEeC--CCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEEEecCCc-----
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMP--NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAFCSNKET----- 757 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----- 757 (995)
.++|++.+.||+|+||+||+|.+. +++.||||++...........+.+|++++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 367899999999999999999874 5899999998654444445678899999999999999999999987665
Q ss_pred ceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 758 NLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 758 ~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
.|+||||+++++|.+++.. .+++..++.++.||+.||.|||+++ |+||||||+||+++.+ .+||+|||+++.
T Consensus 159 ~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~g---iiHrDlkp~NIll~~~-~~kl~DFG~a~~ 230 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSR 230 (681)
T ss_dssp EEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEECSS-CEEECCCTTCEE
T ss_pred eEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCC---CeecccChHHeEEeCC-cEEEEecccchh
Confidence 6999999999999988743 6899999999999999999999887 9999999999999985 899999999987
Q ss_pred cccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhh
Q 001922 838 LIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSI 917 (995)
Q Consensus 838 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (995)
.... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||...... .
T Consensus 231 ~~~~------~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~------------~-------- 283 (681)
T 2pzi_A 231 INSF------GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVD------------G-------- 283 (681)
T ss_dssp TTCC------SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECS------------S--------
T ss_pred cccC------CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccc------------c--------
Confidence 5332 3457999999999987654 88999999999999999999987531100 0
Q ss_pred cCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCC-HHHHHHHHccC
Q 001922 918 LDPRLSMVPKEEAMHLLFVAMLCIQENSIERPR-MREVVQMLSEF 961 (995)
Q Consensus 918 ~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt-~~evl~~L~~~ 961 (995)
+. ........+..+.+++.+||+.||++||+ ++++.+.+.++
T Consensus 284 ~~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 284 LP--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp CC--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred cc--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence 00 00011234467889999999999999995 66666666554
No 290
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.8e-34 Score=330.97 Aligned_cols=240 Identities=14% Similarity=0.114 Sum_probs=178.8
Q ss_pred hccCCCeeeccCceEEEEEEe-CCCcEEEEEEecCCCCC--ChhHHHHHHHHHHhccCC-CCce----------------
Q 001922 687 CVKDGNVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTH--SHDHGFRAEIQTLGNIRH-RNIV---------------- 746 (995)
Q Consensus 687 ~~~~~~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~h-pniv---------------- 746 (995)
.|+.++.||+|+||+||+|++ .+|+.||||++...... ...+.+.+|+.+++.++| ++..
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 467788999999999999985 56999999998533222 235678999999999976 2211
Q ss_pred -----eEeEEEec-----CCcceEEEEeccCCChhhhhc-----CCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 001922 747 -----RLLAFCSN-----KETNLLVYEYMRNGSLGEALH-----GKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVH 811 (995)
Q Consensus 747 -----~~~~~~~~-----~~~~~lv~e~~~~gsL~~~l~-----~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiH 811 (995)
.+..++.. ....+++|+++ +++|.+++. ...+..+++..+..++.|++.||+|||+++ |+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~---iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYG---LVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccc
Confidence 11111111 12356777766 679999984 334556788899999999999999999887 999
Q ss_pred cCCCCCCEEECCCCCeEEeeeccccccccCCCCccccccccCccccccccc----------ccCCCCcccchhhHHHHHH
Q 001922 812 RDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYA----------YTLRVDEKSDVYSFGVVLL 881 (995)
Q Consensus 812 rDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~----------~~~~~~~~~DvwSlGvil~ 881 (995)
|||||+|||++.++.+||+|||+++..... ....+| +.|+|||++ .+..++.++|||||||++|
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~a~~~~~~-----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ 308 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEHLVRDGAS-----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIY 308 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTEE-----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHH
T ss_pred CCcccceEEEecCCeEEEEeccceeecCCc-----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHH
Confidence 999999999999999999999998864321 345567 999999998 5566889999999999999
Q ss_pred HHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcCCcCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHH
Q 001922 882 ELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILDPRLSMVPKEEAMHLLFVAMLCIQENSIERPRMREVVQ 956 (995)
Q Consensus 882 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~evl~ 956 (995)
||++|+.||....... ....++.. ... .+..+.+++.+||+.||++||++.|+++
T Consensus 309 elltg~~Pf~~~~~~~---------------~~~~~~~~-~~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 309 WIWCADLPNTDDAALG---------------GSEWIFRS-CKN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHSSCCCCTTGGGS---------------CSGGGGSS-CCC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHCCCCCCCcchhh---------------hHHHHHhh-ccc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 9999999996532110 01111111 112 2356899999999999999999877753
No 291
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.6e-33 Score=309.20 Aligned_cols=229 Identities=23% Similarity=0.271 Sum_probs=180.6
Q ss_pred HHhhccCC-CeeeccCceEEEEEEe-CCCcEEEEEEecCCCCCChhHHHHHHHHHH-hccCCCCceeEeEEEec----CC
Q 001922 684 ILECVKDG-NVIGRGGAGIVYHGKM-PNGVEIAVKKLLGFGTHSHDHGFRAEIQTL-GNIRHRNIVRLLAFCSN----KE 756 (995)
Q Consensus 684 ~~~~~~~~-~~lG~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~hpniv~~~~~~~~----~~ 756 (995)
+.+.|... +.||+|+||.||+|.. .+++.||+|++.. ...+.+|+.++ +..+||||+++++++.. ..
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~ 88 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRK 88 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCc
Confidence 34566665 7899999999999976 5689999999842 34577888888 55589999999999876 67
Q ss_pred cceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECC---CCCeEEeeec
Q 001922 757 TNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNS---AFEAHVADFG 833 (995)
Q Consensus 757 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~---~~~vkl~DfG 833 (995)
..++||||+++|+|.+++.......+++..++.++.|++.||.|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 89 CLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTT---EECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred eEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 7899999999999999998766667999999999999999999999887 999999999999998 7889999999
Q ss_pred cccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhh
Q 001922 834 LAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEE 913 (995)
Q Consensus 834 la~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~ 913 (995)
++.... +..++.++||||+||++|||++|+.||......... ..
T Consensus 166 ~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~--------~~---- 209 (299)
T 3m2w_A 166 FAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS--------PG---- 209 (299)
T ss_dssp TCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC---------------CC----
T ss_pred cccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhh--------HH----
Confidence 987531 234678899999999999999999999653221100 00
Q ss_pred hhhhcCCcCCCCC----HHHHHHHHHHHhcccCCCCCCCCCHHHHHHH
Q 001922 914 FLSILDPRLSMVP----KEEAMHLLFVAMLCIQENSIERPRMREVVQM 957 (995)
Q Consensus 914 ~~~~~d~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPt~~evl~~ 957 (995)
....+.......+ ...+..+.+++.+||+.||++||+++|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 210 MKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 0000000001112 1346679999999999999999999999973
No 292
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=9.2e-34 Score=314.58 Aligned_cols=271 Identities=21% Similarity=0.272 Sum_probs=157.7
Q ss_pred cccccchHHHHHHHHHhC-CCCCCCCCCCCC--CCCCCCceeeeEEeCC----------CceeeeecCCCCccccCCccc
Q 001922 22 AASLVNDFHVLVALKQGF-ENPEPALISWNS--SNPSSVCSWAGICCSR----------DRVASLDLTDLNLCGSVPAQI 88 (995)
Q Consensus 22 ~~~~~~~~~~Ll~~k~~~-~~~~~~l~~W~~--~~~~~~C~w~gv~C~~----------~~v~~l~l~~~~l~~~~~~~~ 88 (995)
.++..+|++||++||+++ .||.+.+.+|.. ....++|.|.|+.|.. .+|+.|+|++++++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 445678999999999999 578778899941 1135789999999952 34555555555554 444444
Q ss_pred cCCCCCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceee
Q 001922 89 LRLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLD 168 (995)
Q Consensus 89 ~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 168 (995)
.+ +++|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..+.++++|++|+
T Consensus 101 ~~----------------------l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 101 FR----------------------LSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp GG----------------------GTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred hh----------------------CCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 44 455555555555555 34445555555555555555555 3455566666666666
Q ss_pred ccCccccccCCcccc---------CCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccE
Q 001922 169 LGGNYFFGKIPNSYG---------ELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVH 239 (995)
Q Consensus 169 L~~N~l~~~~p~~l~---------~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~ 239 (995)
|++|++.+.+|..++ ++++|++|+|++|+++ .+|..++++++| ++
T Consensus 157 L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L-------------------------~~ 210 (328)
T 4fcg_A 157 IRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNL-------------------------KS 210 (328)
T ss_dssp EEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTC-------------------------CE
T ss_pred CCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCC-------------------------CE
Confidence 666655555665544 3777777777777776 445444444433 34
Q ss_pred EECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcC
Q 001922 240 LDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRL 319 (995)
Q Consensus 240 L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 319 (995)
|+|++|++++ +|..+..+++|++|++++|.+.+.+|..+..+++|++|+|++|.+.+.+|..+.++++|+.|+|++|++
T Consensus 211 L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 211 LKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp EEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred EEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 4444444442 233344444444444444444444555555555555555555555555555555556666666666555
Q ss_pred CCCCCccccCCCCcceEEeccCccc
Q 001922 320 HGSIPDYLADLPNLETLGLWQNNFT 344 (995)
Q Consensus 320 ~~~~p~~~~~l~~L~~L~L~~N~l~ 344 (995)
.+.+|..+..+++|+.+++..|.+.
T Consensus 290 ~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 290 LSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp CCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred hhhccHHHhhccCceEEeCCHHHHH
Confidence 5556666666666666665555443
No 293
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.5e-32 Score=304.52 Aligned_cols=288 Identities=23% Similarity=0.261 Sum_probs=188.0
Q ss_pred CCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEec
Q 001922 284 NLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLS 363 (995)
Q Consensus 284 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 363 (995)
+++.+++++|.++ .+|..+. ++|+.|++++|++++..|..|..+++|++|+|++|++++..|..|+.+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 3455555555554 3333332 345555555555554444455555555555555555555445555555555555555
Q ss_pred CceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccC--CCCCCCcccCCCCceeeccCccccC
Q 001922 364 SNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLN--GSIPDGFIYLPGLNLAELQSNYLSG 441 (995)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~--~~~p~~~~~l~~L~~l~l~~n~l~~ 441 (995)
+|+++ .+|..+. ++|+.|++++|.+.+..+..+..+++|+.|++++|.++ +..|..+..+ +|+.+++++|++++
T Consensus 111 ~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 111 KNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp SSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc
Confidence 55555 3444333 45555555555555544455556666666666666664 2455555555 56666666666654
Q ss_pred CCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCc
Q 001922 442 SLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPA 521 (995)
Q Consensus 442 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 521 (995)
+|... .++|++|++++|++++..+..+.++++|+.|+|++|++++..+..++.+++|+.|+|++|+++ .+|..
T Consensus 187 -l~~~~-----~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~ 259 (332)
T 2ft3_A 187 -IPKDL-----PETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAG 259 (332)
T ss_dssp -CCSSS-----CSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTT
T ss_pred -cCccc-----cCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChh
Confidence 23221 257888888888888777788888889999999999988777778888888999999999888 78888
Q ss_pred cCcccccceeeccCCcccCCCccccccc------cccCeEeccccccc--cccCcccccCCcccEEeccCCC
Q 001922 522 IGYCNHLTYLDMSQNNLSGSIPPEISNV------RILNYLNLSRNHLN--QNIPKSIGSMKSLTIADFSFND 585 (995)
Q Consensus 522 ~~~l~~L~~L~Ls~N~l~~~ip~~l~~l------~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~l~ls~N~ 585 (995)
++.+++|++|+|++|++++..+..|..+ ..|+.|+|++|++. +..|..+..+++|+.+++++|+
T Consensus 260 l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 260 LPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp GGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred hhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhccccc
Confidence 8888899999999999886666666553 56888999999887 5677788888888888888874
No 294
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=2.9e-32 Score=303.78 Aligned_cols=302 Identities=22% Similarity=0.233 Sum_probs=190.7
Q ss_pred CCCCCCCCCCCC-ceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccc
Q 001922 46 LISWNSSNPSSV-CSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNIS 122 (995)
Q Consensus 46 l~~W~~~~~~~~-C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls 122 (995)
+..|....|..| |.|+.+.|+... ++ .+|..+. +.++.|+|++|++++.. .+.++++|++|+|+
T Consensus 18 i~~~~~~cp~~c~c~l~~l~~~~~~----------l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 84 (330)
T 1xku_A 18 IEPMGPVCPFRCQCHLRVVQCSDLG----------LE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILI 84 (330)
T ss_dssp ----CCCCCTTCEEETTEEECTTSC----------CC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred cccccCCCCCCCcCCCeEEEecCCC----------cc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECC
Confidence 455654433333 778777776433 22 3444332 46777777777776643 36666677777777
Q ss_pred cccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccC
Q 001922 123 NNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKI 202 (995)
Q Consensus 123 ~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~ 202 (995)
+|+++++.|..|..+++|++|++++|+++. +|..+. ++|++|++++|.+++..+..|..+++|++|++++|.++.
T Consensus 85 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-- 159 (330)
T 1xku_A 85 NNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-- 159 (330)
T ss_dssp SSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG--
T ss_pred CCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc--
Confidence 666666666666666666666666666654 333332 456666666666655555555666666666666665542
Q ss_pred cccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCc
Q 001922 203 PGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNL 282 (995)
Q Consensus 203 ~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 282 (995)
.+..+..+..+++|++|++++|.++. +|..+. ++|++|++++|++++..|..+..+
T Consensus 160 ---------------------~~~~~~~~~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l 215 (330)
T 1xku_A 160 ---------------------SGIENGAFQGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGL 215 (330)
T ss_dssp ---------------------GGBCTTGGGGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTC
T ss_pred ---------------------cCcChhhccCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCC
Confidence 11234455566667777777777663 344333 667777777777776667777777
Q ss_pred CCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccC------CCC
Q 001922 283 TNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQ------NGK 356 (995)
Q Consensus 283 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~------l~~ 356 (995)
++|++|+|++|.+++..+..|..+++|+.|++++|+++ .+|..+..+++|++|++++|++++..+..|.. ...
T Consensus 216 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~ 294 (330)
T 1xku_A 216 NNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKAS 294 (330)
T ss_dssp TTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCC
T ss_pred CCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccccccccc
Confidence 77777777777777776777777777888888888777 66777777778888888888877666666643 356
Q ss_pred CCeEEecCceecc--cCCCcCcCCCccceeeccccc
Q 001922 357 LQVLDLSSNKLTG--TIPTDLCSSNQLRILILLKNF 390 (995)
Q Consensus 357 L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~l~~N~ 390 (995)
|+.|++++|++.. ..|..|..+..++.+++++|+
T Consensus 295 l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 295 YSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp CSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC----
T ss_pred ccceEeecCcccccccCccccccccceeEEEecccC
Confidence 7788888887752 455667777888888888774
No 295
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.3e-33 Score=312.21 Aligned_cols=240 Identities=15% Similarity=0.144 Sum_probs=185.4
Q ss_pred HhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCC-------CCChhHHHHHHHHHHhccC---------CCCceeE
Q 001922 685 LECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFG-------THSHDHGFRAEIQTLGNIR---------HRNIVRL 748 (995)
Q Consensus 685 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~-------~~~~~~~~~~E~~~l~~l~---------hpniv~~ 748 (995)
.++|+..+.||+|+||+||+|++ +|+.||||++.... .....+.+.+|+.++++++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 46789999999999999999988 78999999985432 2223467889999998886 6676666
Q ss_pred eEEE-----------------ec-------------CCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHH
Q 001922 749 LAFC-----------------SN-------------KETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGL 798 (995)
Q Consensus 749 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l 798 (995)
.+++ .+ .+..|+||||+++|++.+.+.. ..+++..++.++.||+.||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL 174 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASL 174 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHH
Confidence 6653 22 6789999999999987777742 4589999999999999999
Q ss_pred HHHH-hcCCCCeEecCCCCCCEEECCCC--------------------CeEEeeeccccccccCCCCccccccccCcccc
Q 001922 799 CYLH-HDCSPLIVHRDVKSNNILLNSAF--------------------EAHVADFGLAKFLIDGGASECMSAIAGSYGYI 857 (995)
Q Consensus 799 ~~LH-~~~~~~iiHrDlkp~Nill~~~~--------------------~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~ 857 (995)
+||| +.+ |+||||||+|||++.++ .+||+|||+|+...+ ....||+.|+
T Consensus 175 ~~lH~~~~---ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~y~ 244 (336)
T 2vuw_A 175 AVAEASLR---FEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDVSM 244 (336)
T ss_dssp HHHHHHHC---CBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCCTT
T ss_pred HHHHHhCC---EeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeeccc
Confidence 9999 888 99999999999999887 899999999987643 2347999999
Q ss_pred cccccccCCCCcccchhhHHHH-HHHHHhCCCCCCCCCCCchHHHHHHHHhcCChhhhhhhcC--C-cCCCCCHHHHHHH
Q 001922 858 APEYAYTLRVDEKSDVYSFGVV-LLELLTGRRPVGDFGDGVDIVQWSKRATNGRKEEFLSILD--P-RLSMVPKEEAMHL 933 (995)
Q Consensus 858 aPE~~~~~~~~~~~DvwSlGvi-l~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~d--~-~~~~~~~~~~~~l 933 (995)
|||++.+.. +.++||||+|++ .+++++|..||.. ..|...... ....... . .....+...+..+
T Consensus 245 aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~-------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~s~~~ 312 (336)
T 2vuw_A 245 DEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSN-------VLWLHYLTD----KMLKQMTFKTKCNTPAMKQIKRKI 312 (336)
T ss_dssp CSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHH-------HHHHHHHHH----HHHHTCCCSSCCCSHHHHHHHHHH
T ss_pred ChhhhcCCC-ccceehhhhhCCCCcccccccCCCcc-------hhhhhHHHH----hhhhhhccCcccchhhhhhcCHHH
Confidence 999998766 899999998777 7888889999832 111111110 0000000 0 0111234678899
Q ss_pred HHHHhcccCCCCCCCCCHHHHH
Q 001922 934 LFVAMLCIQENSIERPRMREVV 955 (995)
Q Consensus 934 ~~li~~cl~~dP~~RPt~~evl 955 (995)
.+++.+||+.| |++|++
T Consensus 313 ~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 313 QEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHhccC-----CHHHHH
Confidence 99999999976 899988
No 296
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=9.5e-32 Score=299.58 Aligned_cols=290 Identities=23% Similarity=0.244 Sum_probs=211.6
Q ss_pred cccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEe
Q 001922 259 KLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGL 338 (995)
Q Consensus 259 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 338 (995)
.+++.++++++.++ .+|..+. ++|++|+|++|.+++..+..|.++++|++|++++|++++..|..|..+++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 35666777777766 3454443 46777777777777666666777777777777777777666667777777777777
Q ss_pred ccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccC--CCCCcccccCCCCcEEEecCCccC
Q 001922 339 WQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLF--GPIPERLGACYSLTRVRLGQNYLN 416 (995)
Q Consensus 339 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~--~~~p~~l~~l~~L~~L~l~~N~l~ 416 (995)
++|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.+. +..+..+..+++|+.|++++|.++
T Consensus 108 s~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~ 184 (330)
T 1xku_A 108 SKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 184 (330)
T ss_dssp CSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC
T ss_pred CCCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc
Confidence 777776 3444443 56777777777766555555566666666666666553 244555555555555555555554
Q ss_pred CCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCC
Q 001922 417 GSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPP 496 (995)
Q Consensus 417 ~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 496 (995)
. +|... .++|++|++++|++++..|..+..+++|+.|+|++|++++..+.
T Consensus 185 ~-------------------------l~~~~-----~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~ 234 (330)
T 1xku_A 185 T-------------------------IPQGL-----PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNG 234 (330)
T ss_dssp S-------------------------CCSSC-----CTTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred c-------------------------CCccc-----cccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChh
Confidence 2 22211 25789999999999988889999999999999999999988888
Q ss_pred CccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccc------cccCeEecccccccc--ccCc
Q 001922 497 SIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNV------RILNYLNLSRNHLNQ--NIPK 568 (995)
Q Consensus 497 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l------~~L~~L~L~~N~l~~--~~p~ 568 (995)
.+..+++|+.|+|++|+++ .+|..+..+++|++|+|++|++++..+..|+.. ..|+.|+|++|++.. ..|.
T Consensus 235 ~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~ 313 (330)
T 1xku_A 235 SLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPS 313 (330)
T ss_dssp TGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGG
T ss_pred hccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCcc
Confidence 9999999999999999998 799999999999999999999997666666543 788999999999864 5678
Q ss_pred ccccCCcccEEeccCCC
Q 001922 569 SIGSMKSLTIADFSFND 585 (995)
Q Consensus 569 ~~~~l~~L~~l~ls~N~ 585 (995)
.+..+++++.++|++|+
T Consensus 314 ~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 314 TFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGTTCCCGGGEEC----
T ss_pred ccccccceeEEEecccC
Confidence 89999999999999985
No 297
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=2.9e-32 Score=303.92 Aligned_cols=246 Identities=24% Similarity=0.276 Sum_probs=114.5
Q ss_pred CCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeec
Q 001922 92 DKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDL 169 (995)
Q Consensus 92 ~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L 169 (995)
++|++|+|++|++++.. .+.++++|++|+|++|++++..+..|.++++|++|++++|+++. +|..+. ++|++|++
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~--~~L~~L~l 130 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLVE-IPPNLP--SSLVELRI 130 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCCS-CCSSCC--TTCCEEEC
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCCc-cCcccc--ccCCEEEC
Confidence 45555666555555432 34555555555555555554444444444444444444444443 222222 34444444
Q ss_pred cCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCC
Q 001922 170 GGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDG 249 (995)
Q Consensus 170 ~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 249 (995)
++|++++..+..|..+++|++|++++|.++. .+..+..+..+ +|++|++++|++++
T Consensus 131 ~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------------~~~~~~~~~~l-~L~~L~l~~n~l~~ 186 (332)
T 2ft3_A 131 HDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-----------------------SGFEPGAFDGL-KLNYLRISEAKLTG 186 (332)
T ss_dssp CSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-----------------------GGSCTTSSCSC-CCSCCBCCSSBCSS
T ss_pred CCCccCccCHhHhCCCccCCEEECCCCcccc-----------------------CCCCcccccCC-ccCEEECcCCCCCc
Confidence 4444443333334444444444444444431 01223333334 55555555555553
Q ss_pred ccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccC
Q 001922 250 QIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLAD 329 (995)
Q Consensus 250 ~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 329 (995)
+|..+. ++|++|++++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|+.|++++|+++ .+|..+..
T Consensus 187 -l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~ 262 (332)
T 2ft3_A 187 -IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD 262 (332)
T ss_dssp -CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG
T ss_pred -cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc
Confidence 333222 34555555555555444445555555555555555555444445555555555555555554 44444555
Q ss_pred CCCcceEEeccCcccccCCCcccCC------CCCCeEEecCceec
Q 001922 330 LPNLETLGLWQNNFTGVIPENLGQN------GKLQVLDLSSNKLT 368 (995)
Q Consensus 330 l~~L~~L~L~~N~l~~~~p~~~~~l------~~L~~L~L~~N~l~ 368 (995)
+++|+.|++++|++++..+..|... ..|+.|++++|++.
T Consensus 263 l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 263 LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred CccCCEEECCCCCCCccChhHccccccccccccccceEeecCccc
Confidence 5555555555555554444433321 33444444444443
No 298
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=5e-36 Score=350.85 Aligned_cols=363 Identities=20% Similarity=0.128 Sum_probs=182.4
Q ss_pred cccceeccccccccCCCccc-cccccccccccccccccccc----CCccccCCCCCceeeccCccccccCCccc-cCCC-
Q 001922 114 SSLQFLNISNNQFSGGLDWN-YSSLVNLEVFDAYNNNFTAL----LPVGILKLEKLKYLDLGGNYFFGKIPNSY-GELQ- 186 (995)
Q Consensus 114 ~~L~~L~Ls~N~i~~~~~~~-~~~l~~L~~L~Ls~n~i~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~l~- 186 (995)
++|++|+|++|+++...... +..+++|++|++++|+++.. ++..+..+++|++|+|++|.+++..+..+ ..++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56777777777776543333 56666777777777776642 34556666677777777776654333332 2233
Q ss_pred ---CCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCcccc-----Cc
Q 001922 187 ---GLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIG-----NL 258 (995)
Q Consensus 187 ---~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~-----~l 258 (995)
+|++|+|++|+++.... ..++..+..+++|++|++++|.+++..+..+. ..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~---------------------~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~ 141 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGC---------------------GVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQ 141 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGH---------------------HHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTT
T ss_pred CCCceeEEEccCCCCCHHHH---------------------HHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCC
Confidence 46666666666653110 01223334444555555555555433222221 12
Q ss_pred cccCccccccccccCC----CCccccCcCCCCeEeccCCcCcCcCCccccc-----cCCCCEEEccCCcCCCC----CCc
Q 001922 259 KLLDTVFLHINLLSGS----IPKQLGNLTNLVNLDLSNNALTGEIPYSFIN-----LRQLKLFNLFMNRLHGS----IPD 325 (995)
Q Consensus 259 ~~L~~L~l~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~----~p~ 325 (995)
++|++|++++|++++. ++..+..+++|++|++++|.+++..+..+.. .++|+.|++++|.+++. ++.
T Consensus 142 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 221 (461)
T 1z7x_W 142 CRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCG 221 (461)
T ss_dssp CCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHH
T ss_pred CcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHH
Confidence 3344444444444432 2333444455555555555555433333321 33555555555555532 244
Q ss_pred cccCCCCcceEEeccCcccccC-----CCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccc
Q 001922 326 YLADLPNLETLGLWQNNFTGVI-----PENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLG 400 (995)
Q Consensus 326 ~~~~l~~L~~L~L~~N~l~~~~-----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 400 (995)
.+..+++|++|++++|++++.. +..+..+++|++|+|++|.+++... ..++..+.
T Consensus 222 ~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~--------------------~~l~~~l~ 281 (461)
T 1z7x_W 222 IVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGC--------------------GDLCRVLR 281 (461)
T ss_dssp HHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHH--------------------HHHHHHHH
T ss_pred HHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHH--------------------HHHHHHHh
Confidence 4444555555555555554321 1112234455555555555442100 01344455
Q ss_pred cCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCccccc----CCccccC
Q 001922 401 ACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGP----LPFSLSN 476 (995)
Q Consensus 401 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~----~p~~~~~ 476 (995)
.+++|++|++++|.+.+..+..+... + ....++|++|+|++|.+++. ++..+..
T Consensus 282 ~~~~L~~L~Ls~n~i~~~~~~~l~~~----------------l------~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 339 (461)
T 1z7x_W 282 AKESLKELSLAGNELGDEGARLLCET----------------L------LEPGCQLESLWVKSCSFTAACCSHFSSVLAQ 339 (461)
T ss_dssp HCTTCCEEECTTCCCHHHHHHHHHHH----------------H------TSTTCCCCEEECTTSCCBGGGHHHHHHHHHH
T ss_pred hCCCcceEECCCCCCchHHHHHHHHH----------------h------ccCCccceeeEcCCCCCchHHHHHHHHHHhh
Confidence 56666666666666543222211110 0 00123566777777776644 4555666
Q ss_pred CCCCcEEEcCCCcccCCCCCCccc-----hhhhccccccccccCC----CCCCccCcccccceeeccCCccc
Q 001922 477 FSSLQILLLSGNQFSGPIPPSIGE-----LRQVLKLDLSRNSLSG----EIPPAIGYCNHLTYLDMSQNNLS 539 (995)
Q Consensus 477 l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 539 (995)
+++|+.|+|++|++++..+..+.. .++|+.|+|++|.+++ .+|..+..+++|++|+|++|+++
T Consensus 340 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 340 NRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLG 411 (461)
T ss_dssp CSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCC
T ss_pred CCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCC
Confidence 677777777777776433333322 3355555555555553 34555555555555555555554
No 299
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=2.3e-35 Score=345.17 Aligned_cols=384 Identities=18% Similarity=0.145 Sum_probs=244.4
Q ss_pred cccccccccccccccccCCcc-ccCCCCCceeeccCccccc----cCCccccCCCCCceeeccCCcccccCcccccchhh
Q 001922 137 LVNLEVFDAYNNNFTALLPVG-ILKLEKLKYLDLGGNYFFG----KIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTN 211 (995)
Q Consensus 137 l~~L~~L~Ls~n~i~~~~p~~-~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 211 (995)
.++|++||+++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++..+..+..
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~--- 78 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQ--- 78 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHH---
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHH---
Confidence 357888888888887654333 6778888888888888874 35666777888888888888887433322211
Q ss_pred hhhhhccccccccCCCCcccCC-CCcccEEECcCCCCCC----ccCccccCccccCccccccccccCCCCcccc-----C
Q 001922 212 LREIYLGYYNVFEGGIPREVGK-LVNLVHLDLSSCELDG----QIPHEIGNLKLLDTVFLHINLLSGSIPKQLG-----N 281 (995)
Q Consensus 212 L~~L~L~~n~~~~~~~p~~~~~-l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~-----~ 281 (995)
.+.. ..+|++|+|++|+++. .++..+..+++|++|++++|.+++..+..+. .
T Consensus 79 ------------------~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~ 140 (461)
T 1z7x_W 79 ------------------GLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDP 140 (461)
T ss_dssp ------------------TTCSTTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTST
T ss_pred ------------------HHhhCCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcC
Confidence 0111 1268889999998874 4466777777777777777777643333222 2
Q ss_pred cCCCCeEeccCCcCcCcC----CccccccCCCCEEEccCCcCCCCCCcccc-----CCCCcceEEeccCccccc----CC
Q 001922 282 LTNLVNLDLSNNALTGEI----PYSFINLRQLKLFNLFMNRLHGSIPDYLA-----DLPNLETLGLWQNNFTGV----IP 348 (995)
Q Consensus 282 l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~L~~N~l~~~----~p 348 (995)
.++|++|+|++|.+++.. +..+..+++|+.|++++|.+++..+..+. ..++|++|++++|.+++. ++
T Consensus 141 ~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 220 (461)
T 1z7x_W 141 QCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLC 220 (461)
T ss_dssp TCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHH
T ss_pred CCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHH
Confidence 456777777777777533 44455567777777777776644333332 245667777777766642 34
Q ss_pred CcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCC----CCCCcc
Q 001922 349 ENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGS----IPDGFI 424 (995)
Q Consensus 349 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~----~p~~~~ 424 (995)
..+..+++|++|+|++|++++.....+ .+..+..+++|++|++++|.++.. ++..+.
T Consensus 221 ~~l~~~~~L~~L~Ls~n~l~~~~~~~l-------------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~ 281 (461)
T 1z7x_W 221 GIVASKASLRELALGSNKLGDVGMAEL-------------------CPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLR 281 (461)
T ss_dssp HHHHHCTTCCEEECCSSBCHHHHHHHH-------------------HHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHH
T ss_pred HHHHhCCCccEEeccCCcCChHHHHHH-------------------HHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHh
Confidence 555566666666666666653211000 012223467888888888887643 233332
Q ss_pred cCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccC-----CCCCcEEEcCCCcccCC----CC
Q 001922 425 YLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSN-----FSSLQILLLSGNQFSGP----IP 495 (995)
Q Consensus 425 ~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~~----~p 495 (995)
.+ ++|++|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++
T Consensus 282 ~~---------------------------~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~ 334 (461)
T 1z7x_W 282 AK---------------------------ESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFS 334 (461)
T ss_dssp HC---------------------------TTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHH
T ss_pred hC---------------------------CCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHH
Confidence 22 45667777777776544433332 36889999999988754 45
Q ss_pred CCccchhhhccccccccccCCCCCCccCc-----ccccceeeccCCcccC----CCccccccccccCeEecccccccccc
Q 001922 496 PSIGELRQVLKLDLSRNSLSGEIPPAIGY-----CNHLTYLDMSQNNLSG----SIPPEISNVRILNYLNLSRNHLNQNI 566 (995)
Q Consensus 496 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~ip~~l~~l~~L~~L~L~~N~l~~~~ 566 (995)
..+..+++|+.|+|++|.+++..+..+.. .++|++|+|++|++++ .+|..+..+++|++|+|++|++++.-
T Consensus 335 ~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~ 414 (461)
T 1z7x_W 335 SVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAG 414 (461)
T ss_dssp HHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHH
T ss_pred HHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHH
Confidence 55666788888888888887654444443 5688888888888875 67888888888888888888887642
Q ss_pred Ccccc-----cCCcccEEeccCCCCC
Q 001922 567 PKSIG-----SMKSLTIADFSFNDFS 587 (995)
Q Consensus 567 p~~~~-----~l~~L~~l~ls~N~l~ 587 (995)
...+. ...+|+.|++.++.+.
T Consensus 415 ~~~l~~~l~~~~~~L~~L~~~~~~~~ 440 (461)
T 1z7x_W 415 ILQLVESVRQPGCLLEQLVLYDIYWS 440 (461)
T ss_dssp HHHHHHHHTSTTCCCCEEECTTCCCC
T ss_pred HHHHHHHhccCCcchhheeecccccC
Confidence 11111 1234566666555544
No 300
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=6.6e-31 Score=289.48 Aligned_cols=282 Identities=22% Similarity=0.277 Sum_probs=172.0
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCC--Ccc
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGG--LDW 132 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~--~~~ 132 (995)
.|.|.+|.|+...++ .+|..+. ++|++|+|++|+++... .+.++++|++|+|++|.++.. .+.
T Consensus 6 ~C~~~~l~c~~~~l~-----------~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 72 (306)
T 2z66_A 6 SCSGTEIRCNSKGLT-----------SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQ 72 (306)
T ss_dssp EEETTEEECCSSCCS-----------SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEH
T ss_pred eeCCCEEEcCCCCcc-----------cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccc
Confidence 389999999865433 3454332 57888888888887644 267788888888888877633 245
Q ss_pred cccccccccccccccccccccCCccccCCCCCceeeccCccccccCC-ccccCCCCCceeeccCCcccccCcccccchhh
Q 001922 133 NYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIP-NSYGELQGLEYLSLAGNDLTGKIPGELGNLTN 211 (995)
Q Consensus 133 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 211 (995)
.+..+++|++|++++|.++. +|..+..+++|++|++++|.+++..+ ..+..+++|++|++++|.+++..+..+.+++
T Consensus 73 ~~~~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~- 150 (306)
T 2z66_A 73 SDFGTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS- 150 (306)
T ss_dssp HHHSCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCT-
T ss_pred ccccccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCc-
Confidence 55566777777777777765 45556777777777777777764443 4566777777777777777655555555444
Q ss_pred hhhhhccccccccCCCCcccCCCCcccEEECcCCCCCC-ccCccccCccccCccccccccccCCCCccccCcCCCCeEec
Q 001922 212 LREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDG-QIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDL 290 (995)
Q Consensus 212 L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~L 290 (995)
+|++|++++|.+++ ..|..+..+++|++|++++|++++..|..+..+++|++|+|
T Consensus 151 ------------------------~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 206 (306)
T 2z66_A 151 ------------------------SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNM 206 (306)
T ss_dssp ------------------------TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred ------------------------CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEEC
Confidence 45555555555543 34455555555555555555555555555666666666666
Q ss_pred cCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCC-CcceEEeccCcccccCC--CcccCCCCCCeEEecCcee
Q 001922 291 SNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLP-NLETLGLWQNNFTGVIP--ENLGQNGKLQVLDLSSNKL 367 (995)
Q Consensus 291 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~L~~N~l 367 (995)
++|.+++..+..|..+++|+.|++++|++++..|..+..++ +|++|+|++|.+++.-+ .....+...+.+.+..+.+
T Consensus 207 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~ 286 (306)
T 2z66_A 207 SHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERM 286 (306)
T ss_dssp TTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGC
T ss_pred CCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhcccccc
Confidence 66666655555566666666666666666666666666653 66666666666654211 0011122334445555666
Q ss_pred cccCCCcCcC
Q 001922 368 TGTIPTDLCS 377 (995)
Q Consensus 368 ~~~~p~~~~~ 377 (995)
....|..+.+
T Consensus 287 ~C~~p~~~~g 296 (306)
T 2z66_A 287 ECATPSDKQG 296 (306)
T ss_dssp BEEESGGGTT
T ss_pred ccCCchhhCC
Confidence 6666665544
No 301
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=8.9e-31 Score=294.57 Aligned_cols=277 Identities=20% Similarity=0.243 Sum_probs=163.6
Q ss_pred CCceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCccc
Q 001922 56 SVCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWN 133 (995)
Q Consensus 56 ~~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~ 133 (995)
..|.|.|+ | |+++++++ .+|..+. ++|++|+|++|++++.. .+.++++|++|+|++|++++..+..
T Consensus 28 ~~C~~~~~-c--------~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 95 (353)
T 2z80_A 28 LSCDRNGI-C--------KGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDS 95 (353)
T ss_dssp CEECTTSE-E--------ECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTT
T ss_pred CCCCCCeE-e--------eCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhh
Confidence 46899887 5 34455554 4666544 36777777777776533 3666666666666666666655555
Q ss_pred ccccccccccccccccccccCCccccCCCCCceeeccCccccccCC-ccccCCCCCceeeccCCc-ccccCcccccchhh
Q 001922 134 YSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIP-NSYGELQGLEYLSLAGND-LTGKIPGELGNLTN 211 (995)
Q Consensus 134 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~ 211 (995)
|.++++|++|++++|+++++.+..|.++++|++|+|++|++++..+ ..|..+++|++|++++|+ +++.
T Consensus 96 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~---------- 165 (353)
T 2z80_A 96 FSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKI---------- 165 (353)
T ss_dssp TTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEE----------
T ss_pred cCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCcccccc----------
Confidence 5555566666666665555444445555555555555555552222 245555555555555552 3322
Q ss_pred hhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEecc
Q 001922 212 LREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLS 291 (995)
Q Consensus 212 L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls 291 (995)
.+..+.++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|+++
T Consensus 166 ---------------~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 230 (353)
T 2z80_A 166 ---------------QRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELR 230 (353)
T ss_dssp ---------------CTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEE
T ss_pred ---------------CHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECC
Confidence 33445555666666666666666666666666666666666666653333334446677777777
Q ss_pred CCcCcCcCCcccc---ccCCCCEEEccCCcCCC----CCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecC
Q 001922 292 NNALTGEIPYSFI---NLRQLKLFNLFMNRLHG----SIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSS 364 (995)
Q Consensus 292 ~N~l~~~~p~~~~---~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 364 (995)
+|.+++..+..+. ....++.++++++.+++ .+|..+..+++|++|+|++|+++...+..|..+++|++|+|++
T Consensus 231 ~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 310 (353)
T 2z80_A 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHT 310 (353)
T ss_dssp SCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeC
Confidence 7777655444332 24456666666666654 2455666677777777777777643333346677777777777
Q ss_pred ceecc
Q 001922 365 NKLTG 369 (995)
Q Consensus 365 N~l~~ 369 (995)
|++++
T Consensus 311 N~~~~ 315 (353)
T 2z80_A 311 NPWDC 315 (353)
T ss_dssp SCBCC
T ss_pred CCccC
Confidence 76664
No 302
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=1.3e-32 Score=332.69 Aligned_cols=454 Identities=16% Similarity=0.081 Sum_probs=248.9
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCccc---Ccc--c------------cCccccccee
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFT---GSI--E------------IGNLSSLQFL 119 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~--~------------~~~l~~L~~L 119 (995)
|++|.++.+...+. +.+.+ ......+..+..+++|++|+|+++... +.. . ...+++|++|
T Consensus 41 ck~W~~~~~~~~~~--l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L 117 (592)
T 3ogk_B 41 CRRWFKIDSETREH--VTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSV 117 (592)
T ss_dssp CHHHHHHHHHHCCE--EEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEE
T ss_pred hHHHHHhhhccccE--EEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeE
Confidence 45799986543322 22221 122233445567889999999874321 100 1 1267888888
Q ss_pred ccccccccCCCccccccc-c-ccccccccccc-ccc-cCCccccCCCCCceeeccCcccccc----CCccccCCCCCcee
Q 001922 120 NISNNQFSGGLDWNYSSL-V-NLEVFDAYNNN-FTA-LLPVGILKLEKLKYLDLGGNYFFGK----IPNSYGELQGLEYL 191 (995)
Q Consensus 120 ~Ls~N~i~~~~~~~~~~l-~-~L~~L~Ls~n~-i~~-~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~l~~l~~L~~L 191 (995)
+|++|.+++..+..+... + +|++|+|++|. ++. .++.....+++|++|+|++|.+++. ++..+..+++|++|
T Consensus 118 ~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L 197 (592)
T 3ogk_B 118 HFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVL 197 (592)
T ss_dssp EEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEE
T ss_pred EeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEE
Confidence 888887776555555553 3 48888887775 221 1222334677888888888877654 33344567778888
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLL 271 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l 271 (995)
+|++|.+++.....+ +..+..+++|++|++++|.+.+ ++..+..+++|+.|+++.+..
T Consensus 198 ~L~~n~~~~~~~~~l---------------------~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~ 255 (592)
T 3ogk_B 198 NFYMTEFAKISPKDL---------------------ETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNE 255 (592)
T ss_dssp ECTTCCCSSCCHHHH---------------------HHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCC
T ss_pred EeeccCCCccCHHHH---------------------HHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhccccccc
Confidence 888777763222111 1122234556666666666653 445566666666666654222
Q ss_pred c---CCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCC-ccccCCCCcceEEeccCcccccC
Q 001922 272 S---GSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIP-DYLADLPNLETLGLWQNNFTGVI 347 (995)
Q Consensus 272 ~---~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 347 (995)
. +..+..+..+++|+.|+++++... .+|..+..+++|+.|++++|.+++... ..+..+++|+.|+++++-..+.+
T Consensus 256 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l 334 (592)
T 3ogk_B 256 DIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGL 334 (592)
T ss_dssp CTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHH
T ss_pred ccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHH
Confidence 1 223345666777777777775433 566667777778888887777654333 33567778888888733222333
Q ss_pred CCcccCCCCCCeEEecC-----------ceecccCC-CcCcCCCccceeeccccccCCCCCccccc-CCCCcEEEecCCc
Q 001922 348 PENLGQNGKLQVLDLSS-----------NKLTGTIP-TDLCSSNQLRILILLKNFLFGPIPERLGA-CYSLTRVRLGQNY 414 (995)
Q Consensus 348 p~~~~~l~~L~~L~L~~-----------N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~-l~~L~~L~l~~N~ 414 (995)
+..+..+++|++|+|++ |.+++... .....+++|+.|++..|.+.+..+..+.. +++|+.|+++++.
T Consensus 335 ~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~ 414 (592)
T 3ogk_B 335 EVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLD 414 (592)
T ss_dssp HHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECS
T ss_pred HHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecC
Confidence 33345567788888773 44443211 11222444555555444444433333333 4444444443110
Q ss_pred cCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCccccc-----CCccccCCCCCcEEEcCCCc
Q 001922 415 LNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGP-----LPFSLSNFSSLQILLLSGNQ 489 (995)
Q Consensus 415 l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~-----~p~~~~~l~~L~~L~Ls~N~ 489 (995)
..|.+++. ++..+.++++|+.|+|++|.
T Consensus 415 -----------------------------------------------~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~ 447 (592)
T 3ogk_B 415 -----------------------------------------------REERITDLPLDNGVRSLLIGCKKLRRFAFYLRQ 447 (592)
T ss_dssp -----------------------------------------------CCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCG
T ss_pred -----------------------------------------------CCccccCchHHHHHHHHHHhCCCCCEEEEecCC
Confidence 02222221 22224445566666665322
Q ss_pred --ccCCCCCCccc-hhhhccccccccccCC-CCCCccCcccccceeeccCCcccCC-CccccccccccCeEecccccccc
Q 001922 490 --FSGPIPPSIGE-LRQVLKLDLSRNSLSG-EIPPAIGYCNHLTYLDMSQNNLSGS-IPPEISNVRILNYLNLSRNHLNQ 564 (995)
Q Consensus 490 --l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~-ip~~l~~l~~L~~L~L~~N~l~~ 564 (995)
+++..+..++. +++|+.|+|++|++++ .++..+..+++|++|+|++|.+++. ++..+..+++|++|+|++|+++.
T Consensus 448 ~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 448 GGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp GGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCT
T ss_pred CCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCH
Confidence 33322223322 4556666666666654 2344456667777777777776644 33344567777777777777765
Q ss_pred ccCcccc-cCCcccEEeccC
Q 001922 565 NIPKSIG-SMKSLTIADFSF 583 (995)
Q Consensus 565 ~~p~~~~-~l~~L~~l~ls~ 583 (995)
.-...+. .++.+....+..
T Consensus 528 ~~~~~l~~~~p~l~~~~~~~ 547 (592)
T 3ogk_B 528 TGQDLMQMARPYWNIELIPS 547 (592)
T ss_dssp TCTTGGGGCCTTEEEEEECC
T ss_pred HHHHHHHHhCCCcEEEEecC
Confidence 4333332 456555554443
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.6e-29 Score=278.32 Aligned_cols=250 Identities=22% Similarity=0.220 Sum_probs=191.0
Q ss_pred CeEeccCCcccCccccCcccccceeccccccccCCCccccccccccccccccccccccc--CCccccCCCCCceeeccCc
Q 001922 95 TNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTAL--LPVGILKLEKLKYLDLGGN 172 (995)
Q Consensus 95 ~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~--~p~~~~~l~~L~~L~L~~N 172 (995)
+.++.+++.++.... .-.++|++|+|++|+++.+++..|.++++|++|++++|+++.. .|..+..+++|++|+|++|
T Consensus 10 ~~l~c~~~~l~~ip~-~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n 88 (306)
T 2z66_A 10 TEIRCNSKGLTSVPT-GIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLSFN 88 (306)
T ss_dssp TEEECCSSCCSSCCS-CCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECCSC
T ss_pred CEEEcCCCCcccCCC-CCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECCCC
Confidence 456777776664321 2235677777777777766655666667777777777666643 2455556666666666666
Q ss_pred cccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccC
Q 001922 173 YFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIP 252 (995)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 252 (995)
.++ .+|..+..+++|++|++++|++++..+ ...+..+++|++|++++|.+++..+
T Consensus 89 ~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~~ 143 (306)
T 2z66_A 89 GVI-TMSSNFLGLEQLEHLDFQHSNLKQMSE------------------------FSVFLSLRNLIYLDISHTHTRVAFN 143 (306)
T ss_dssp SEE-EEEEEEETCTTCCEEECTTSEEESSTT------------------------TTTTTTCTTCCEEECTTSCCEECST
T ss_pred ccc-cChhhcCCCCCCCEEECCCCccccccc------------------------chhhhhccCCCEEECCCCcCCccch
Confidence 665 455556666666666666666653221 1356677889999999999988888
Q ss_pred ccccCccccCccccccccccC-CCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCC
Q 001922 253 HEIGNLKLLDTVFLHINLLSG-SIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLP 331 (995)
Q Consensus 253 ~~~~~l~~L~~L~l~~N~l~~-~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 331 (995)
..+..+++|++|++++|.+++ .+|..+..+++|++|++++|.+++..|..|..+++|+.|++++|++++..+..+..++
T Consensus 144 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 223 (306)
T 2z66_A 144 GIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLN 223 (306)
T ss_dssp TTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCT
T ss_pred hhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcc
Confidence 889999999999999999986 5788899999999999999999988888999999999999999999987777888899
Q ss_pred CcceEEeccCcccccCCCcccCCC-CCCeEEecCceeccc
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNG-KLQVLDLSSNKLTGT 370 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~ 370 (995)
+|+.|+|++|++++..|..+..++ +|++|+|++|++++.
T Consensus 224 ~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 224 SLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred cCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 999999999999988888888884 899999999999854
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.3e-29 Score=281.78 Aligned_cols=279 Identities=19% Similarity=0.159 Sum_probs=150.1
Q ss_pred ccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccC
Q 001922 237 LVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFM 316 (995)
Q Consensus 237 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 316 (995)
....++++|.++ .+|..+. ++|++|++++|++++..+..|.++++|++|++++|.+++..|..|.++++|++|++++
T Consensus 33 ~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 33 NGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp TSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 334555555555 3344333 3555566666665554444555666666666666666655555566666666666666
Q ss_pred CcCCCCCCccccCCCCcceEEeccCcccccCC-CcccCCCCCCeEEecCc-eecccCCCcCcCCCccceeeccccccCCC
Q 001922 317 NRLHGSIPDYLADLPNLETLGLWQNNFTGVIP-ENLGQNGKLQVLDLSSN-KLTGTIPTDLCSSNQLRILILLKNFLFGP 394 (995)
Q Consensus 317 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 394 (995)
|++++..+..|..+++|++|++++|++++..+ ..+..+++|++|++++| .+++..+..+..+++|+.|++++|.+.+.
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 189 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSY 189 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEE
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCcc
Confidence 66654444445556666666666666653322 24555666666666665 34444455555566666666666666555
Q ss_pred CCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccc
Q 001922 395 IPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSL 474 (995)
Q Consensus 395 ~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~ 474 (995)
.|..+..+++|++|++++|++....+..+..+++|+.+++++|.+++..+.......
T Consensus 190 ~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~----------------------- 246 (353)
T 2z80_A 190 EPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGE----------------------- 246 (353)
T ss_dssp CTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC-----------------------------
T ss_pred CHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccccc-----------------------
Confidence 555666666666666666655422222222334444444444333322211111111
Q ss_pred cCCCCCcEEEcCCCcccC----CCCCCccchhhhccccccccccCCCCCCc-cCcccccceeeccCCcccCCCc
Q 001922 475 SNFSSLQILLLSGNQFSG----PIPPSIGELRQVLKLDLSRNSLSGEIPPA-IGYCNHLTYLDMSQNNLSGSIP 543 (995)
Q Consensus 475 ~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ip 543 (995)
....++.++|++|.+++ .+|..+..+++|+.|+|++|+++ .+|.. |+.+++|++|+|++|.+++..|
T Consensus 247 -~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 247 -TNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp -CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred -ccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 22344455555555443 24555666667777777777776 45554 4777788888888887775443
No 305
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=3e-32 Score=329.46 Aligned_cols=378 Identities=12% Similarity=0.055 Sum_probs=249.5
Q ss_pred CCCCCceeeccCCcccccCcccccch--hhhhhhhcccccccc-CCCCcccCCCCcccEEECcCCCCCCc----cCcccc
Q 001922 184 ELQGLEYLSLAGNDLTGKIPGELGNL--TNLREIYLGYYNVFE-GGIPREVGKLVNLVHLDLSSCELDGQ----IPHEIG 256 (995)
Q Consensus 184 ~l~~L~~L~Ls~N~l~~~~~~~l~~l--~~L~~L~L~~n~~~~-~~~p~~~~~l~~L~~L~Ls~n~l~~~----~~~~~~ 256 (995)
.+++|++|+|++|.+++..+..++.. .+|++|+|++|.... ..++.....+++|++|+|++|.+++. ++..+.
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~ 189 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ 189 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh
Confidence 45666666666666665555555543 336666665544211 11222233567778888888777654 233345
Q ss_pred CccccCccccccccccC----CCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC---CCCCccccC
Q 001922 257 NLKLLDTVFLHINLLSG----SIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH---GSIPDYLAD 329 (995)
Q Consensus 257 ~l~~L~~L~l~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~---~~~p~~~~~ 329 (995)
.+++|++|++++|.+++ .++..+.++++|+.|++++|.+.+ +|..+.++++|+.|+++.+... +..+..+..
T Consensus 190 ~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~ 268 (592)
T 3ogk_B 190 HNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVF 268 (592)
T ss_dssp HCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCC
T ss_pred cCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhc
Confidence 56777777777777762 234445567778888888877774 5567777778888877754322 233445666
Q ss_pred CCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCC-CcCcCCCccceeeccccccCCCCCcccccCCCCcEE
Q 001922 330 LPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIP-TDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRV 408 (995)
Q Consensus 330 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L 408 (995)
+++|+.|+++++... .+|..+..+++|++|+|++|.+++... ..+..+++|+.|+++++...+.++.....+++|++|
T Consensus 269 ~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L 347 (592)
T 3ogk_B 269 PRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRL 347 (592)
T ss_dssp CTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEE
T ss_pred cccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEE
Confidence 777777777775433 556666777778888888777654333 224566777777776333223334444566777777
Q ss_pred EecC-----------CccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccC-
Q 001922 409 RLGQ-----------NYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSN- 476 (995)
Q Consensus 409 ~l~~-----------N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~- 476 (995)
++++ |.+++.....+ ...+++|++|+++.|++++..+..+..
T Consensus 348 ~L~~g~~~~~~~~~~~~~~~~~~~~l--------------------------~~~~~~L~~L~l~~~~l~~~~~~~l~~~ 401 (592)
T 3ogk_B 348 RIERGADEQGMEDEEGLVSQRGLIAL--------------------------AQGCQELEYMAVYVSDITNESLESIGTY 401 (592)
T ss_dssp EEECCCCSSTTSSTTCCCCHHHHHHH--------------------------HHHCTTCSEEEEEESCCCHHHHHHHHHH
T ss_pred EeecCccccccccccCccCHHHHHHH--------------------------HhhCccCeEEEeecCCccHHHHHHHHhh
Confidence 7773 33321100000 012457888888888888777777765
Q ss_pred CCCCcEEEcC----CCcccCC-----CCCCccchhhhcccccccc--ccCCCCCCccCc-ccccceeeccCCcccC-CCc
Q 001922 477 FSSLQILLLS----GNQFSGP-----IPPSIGELRQVLKLDLSRN--SLSGEIPPAIGY-CNHLTYLDMSQNNLSG-SIP 543 (995)
Q Consensus 477 l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~-~ip 543 (995)
+++|+.|+|+ .|++++. ++..+..+++|+.|+|++| .+++..+..++. +++|++|+|++|++++ .++
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~ 481 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLM 481 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHH
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHH
Confidence 8999999996 7788753 2333667899999999854 376655555544 8899999999999986 456
Q ss_pred cccccccccCeEeccccccccc-cCcccccCCcccEEeccCCCCCCC
Q 001922 544 PEISNVRILNYLNLSRNHLNQN-IPKSIGSMKSLTIADFSFNDFSGK 589 (995)
Q Consensus 544 ~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~l~ls~N~l~g~ 589 (995)
..+..+++|++|+|++|++++. ++..+..+++|+.|++++|++++.
T Consensus 482 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~it~~ 528 (592)
T 3ogk_B 482 EFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYRASMT 528 (592)
T ss_dssp HHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCBCCTT
T ss_pred HHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCcCCHH
Confidence 6678899999999999998765 445556799999999999998764
No 306
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.2e-28 Score=270.00 Aligned_cols=234 Identities=22% Similarity=0.295 Sum_probs=140.6
Q ss_pred cCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEE
Q 001922 282 LTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLD 361 (995)
Q Consensus 282 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 361 (995)
.++++.|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+++|++|+|++|+++ .+|..++.+++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 357788888888887 66667777888888888888887 67777778888888888888887 6677788888888888
Q ss_pred ecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccC
Q 001922 362 LSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSG 441 (995)
Q Consensus 362 L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~ 441 (995)
|++|++.+.+|..+... ..+..+.++++|++|++++|+++ .
T Consensus 157 L~~n~~~~~~p~~~~~~---------------~~~~~~~~l~~L~~L~L~~n~l~-~----------------------- 197 (328)
T 4fcg_A 157 IRACPELTELPEPLAST---------------DASGEHQGLVNLQSLRLEWTGIR-S----------------------- 197 (328)
T ss_dssp EEEETTCCCCCSCSEEE---------------C-CCCEEESTTCCEEEEEEECCC-C-----------------------
T ss_pred CCCCCCccccChhHhhc---------------cchhhhccCCCCCEEECcCCCcC-c-----------------------
Confidence 88877777777665431 11223445555555555555554 2
Q ss_pred CCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCc
Q 001922 442 SLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPA 521 (995)
Q Consensus 442 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 521 (995)
+|..+.++++|+.|+|++|++++ +|..++.+++|+.|+|++|++.+.+|..
T Consensus 198 ----------------------------lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~ 248 (328)
T 4fcg_A 198 ----------------------------LPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPI 248 (328)
T ss_dssp ----------------------------CCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCC
T ss_pred ----------------------------chHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHH
Confidence 33334444444444444444442 3334444445555555555554455555
Q ss_pred cCcccccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCC
Q 001922 522 IGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDF 586 (995)
Q Consensus 522 ~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 586 (995)
++.+++|++|+|++|++.+.+|..+.++++|++|+|++|++.+.+|..++++++|+.++++.|.+
T Consensus 249 ~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 249 FGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGS
T ss_pred hcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHH
Confidence 55555555555555555555555555555555555555555555555555555555555554433
No 307
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.96 E-value=3.3e-29 Score=298.70 Aligned_cols=292 Identities=24% Similarity=0.252 Sum_probs=179.1
Q ss_pred CCCCCCCCCCCCCCCceeeeEEe--------CCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCccccCccc
Q 001922 43 EPALISWNSSNPSSVCSWAGICC--------SRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSIEIGNLS 114 (995)
Q Consensus 43 ~~~l~~W~~~~~~~~C~w~gv~C--------~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~ 114 (995)
...+++|... .+||.|+|..| ....++.|++++++++ .+|..+. ++|++|+|++|+|++... .++
T Consensus 9 ~~~w~~W~~~--~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~--~l~ 81 (622)
T 3g06_A 9 DAVWSAWRRA--APAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA--LPP 81 (622)
T ss_dssp -CHHHHHHHT--CCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC--CCT
T ss_pred HHHHHHHHhc--CCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC--cCC
Confidence 3456778654 45899977543 3346888999999987 7787765 789999999998886444 678
Q ss_pred ccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeecc
Q 001922 115 SLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLA 194 (995)
Q Consensus 115 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 194 (995)
+|++|+|++|+|++++. .+++|++|++++|+|+++ |. .+++|++|+|++|++++ +|.. +++|++|+|+
T Consensus 82 ~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l-~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls 149 (622)
T 3g06_A 82 ELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHL-PA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVS 149 (622)
T ss_dssp TCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCC-CC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred CCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCC-CC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECc
Confidence 88888888888886544 667888888888888874 33 56778888888888873 5553 3778888888
Q ss_pred CCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCC
Q 001922 195 GNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGS 274 (995)
Q Consensus 195 ~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 274 (995)
+|++++ +|.. +.+ |+.|++++|.+++ +| ..+++|+.|++++|++++
T Consensus 150 ~N~l~~-l~~~---~~~-------------------------L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~- 195 (622)
T 3g06_A 150 DNQLAS-LPAL---PSE-------------------------LCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS- 195 (622)
T ss_dssp SSCCSC-CCCC---CTT-------------------------CCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-
T ss_pred CCcCCC-cCCc---cCC-------------------------CCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-
Confidence 888774 3322 233 4444555555442 22 223445555555555543
Q ss_pred CCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCC
Q 001922 275 IPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQN 354 (995)
Q Consensus 275 ~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 354 (995)
+|.. +++|+.|++++|.++ .+|.. +++|+.|++++|+|++ +| ..+++|+.|+|++|+|+. +|. .+
T Consensus 196 l~~~---~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~ 260 (622)
T 3g06_A 196 LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LP 260 (622)
T ss_dssp CCCC---CTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CC
T ss_pred CCCc---cchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---cc
Confidence 2221 245555555555555 22321 2455555555555553 33 234555666666665552 333 34
Q ss_pred CCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCC
Q 001922 355 GKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACY 403 (995)
Q Consensus 355 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~ 403 (995)
++|++|+|++|+|+ .+|..+..+++|+.|+|++|.+.+..|..+..+.
T Consensus 261 ~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 261 SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp TTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred ccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 55666666666665 4555555666666666666666555555554443
No 308
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.3e-28 Score=284.45 Aligned_cols=247 Identities=23% Similarity=0.254 Sum_probs=166.9
Q ss_pred eeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCccccccc
Q 001922 60 WAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSL 137 (995)
Q Consensus 60 w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l 137 (995)
|..|.|+... ++ .+|..+. +++++|+|++|+|++.. .|.++++|++|+|++|+|+++.+..|.++
T Consensus 56 ~~~v~c~~~~----------l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 122 (452)
T 3zyi_A 56 FSKVVCTRRG----------LS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGL 122 (452)
T ss_dssp SCEEECCSSC----------CS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTC
T ss_pred CcEEEECCCC----------cC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCc
Confidence 4667776533 32 3555443 45666666666665432 35555555555555555555554555555
Q ss_pred ccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhc
Q 001922 138 VNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYL 217 (995)
Q Consensus 138 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 217 (995)
++|++|+|++|+|+.+.+..|..+++|++|+|++|.+++..+..|..+++|++|+|++
T Consensus 123 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~---------------------- 180 (452)
T 3zyi_A 123 ASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGE---------------------- 180 (452)
T ss_dssp TTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCC----------------------
T ss_pred ccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCC----------------------
Confidence 5555555555555544444444555555555555555443344444445555555444
Q ss_pred cccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcC
Q 001922 218 GYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTG 297 (995)
Q Consensus 218 ~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 297 (995)
|+......+..+..+++|++|+|++|++++. | .+..+++|+.|++++|++++..|..|.++++|+.|+|++|++++
T Consensus 181 --~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 256 (452)
T 3zyi_A 181 --LKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSL 256 (452)
T ss_dssp --CTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCE
T ss_pred --CCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCce
Confidence 3333333334567778888888888888854 3 57788889999999999988888889999999999999999998
Q ss_pred cCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccc
Q 001922 298 EIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTG 345 (995)
Q Consensus 298 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 345 (995)
..+..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 257 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 257 IERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp ECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred ECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 888899999999999999999998888888899999999999998863
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.3e-31 Score=311.39 Aligned_cols=236 Identities=19% Similarity=0.136 Sum_probs=127.4
Q ss_pred ccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCcccee
Q 001922 305 NLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRIL 384 (995)
Q Consensus 305 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 384 (995)
.+++|+.|+|++|.+++..|..|..+++|++|+|++|.+++..| +..+++|++|+|++|.|++..+ .++|+.|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 44588999999999988888888889999999999999887665 8888889999999998884322 1455555
Q ss_pred eccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCC
Q 001922 385 ILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNN 464 (995)
Q Consensus 385 ~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N 464 (995)
++++|.+.+..+.. +++|+.|++++|.+++..|..|..+ ++|++|+|++|
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l---------------------------~~L~~L~Ls~N 154 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCR---------------------------SRVQYLDLKLN 154 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGG---------------------------SSEEEEECTTS
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCC---------------------------CCCCEEECCCC
Confidence 55555554433321 2334444444444443333322221 23344444444
Q ss_pred cccccCCcccc-CCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCc
Q 001922 465 LLSGPLPFSLS-NFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIP 543 (995)
Q Consensus 465 ~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip 543 (995)
.+++..|..+. .+++|+.|+|++|.|++. |. +..+++|+.|+|++|.|++ +|+.++.+++|+.|+|++|.|+ .+|
T Consensus 155 ~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~-~lp 230 (487)
T 3oja_A 155 EIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIE 230 (487)
T ss_dssp CCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCC-EEC
T ss_pred CCCCcChHHHhhhCCcccEEecCCCccccc-cc-cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCc-ccc
Confidence 44444444443 344455555555544432 11 1224444444444444443 3333444444444444444444 244
Q ss_pred cccccccccCeEeccccccc-cccCcccccCCcccEEec
Q 001922 544 PEISNVRILNYLNLSRNHLN-QNIPKSIGSMKSLTIADF 581 (995)
Q Consensus 544 ~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~l 581 (995)
..+..+++|+.|+|++|++. +.+|..+..++.|+.+++
T Consensus 231 ~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~ 269 (487)
T 3oja_A 231 KALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAK 269 (487)
T ss_dssp TTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHH
T ss_pred hhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEec
Confidence 44444444444444444444 334444444444444443
No 310
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=5.9e-29 Score=274.31 Aligned_cols=254 Identities=21% Similarity=0.174 Sum_probs=183.1
Q ss_pred cCcccccceeccccccccCCCccccccccccccccccccccc-ccCCcccc-------CCCCCceeeccCccccccCCcc
Q 001922 110 IGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFT-ALLPVGIL-------KLEKLKYLDLGGNYFFGKIPNS 181 (995)
Q Consensus 110 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~-~~~p~~~~-------~l~~L~~L~L~~N~l~~~~p~~ 181 (995)
++..++|++|++++|.+ .+|..+... |++|+|++|+++ ..+|..+. ++++|++|+|++|.+++.+|..
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 114 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPP 114 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCC
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHH
Confidence 56678888999999988 455555443 888899999884 45666665 7899999999999999888887
Q ss_pred c--cCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCcc
Q 001922 182 Y--GELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLK 259 (995)
Q Consensus 182 l--~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 259 (995)
+ +.+++|++|+|++|++++. |..++.+... .+++|++|+|++|++++..|..|+.++
T Consensus 115 ~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~--------------------~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 115 LLEATGPDLNILNLRNVSWATR-DAWLAELQQW--------------------LKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTT--------------------CCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred HHHhcCCCccEEEccCCCCcch-hHHHHHHHHh--------------------hcCCCcEEEeeCCCCccchHHHhccCC
Confidence 6 8899999999999999976 7666665210 124566666667777666666666777
Q ss_pred ccCccccccccccCC--CCccc--cCcCCCCeEeccCCcCcCc---CCccccccCCCCEEEccCCcCCCCCC-ccccCCC
Q 001922 260 LLDTVFLHINLLSGS--IPKQL--GNLTNLVNLDLSNNALTGE---IPYSFINLRQLKLFNLFMNRLHGSIP-DYLADLP 331 (995)
Q Consensus 260 ~L~~L~l~~N~l~~~--~p~~l--~~l~~L~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 331 (995)
+|++|++++|++.+. .+..+ ..+++|++|+|++|+|++. ....+.++++|+.|++++|++++..| ..+..++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~ 253 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS 253 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC
Confidence 777777777766543 22333 6777777777777777732 22334566778888888888776664 4455677
Q ss_pred CcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCC
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFG 393 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~ 393 (995)
+|++|+|++|+++ .+|..+. ++|++|+|++|+|++. |. +..+++|+.|++++|++.+
T Consensus 254 ~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 254 QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 8888888888887 5666665 6788888888888754 55 7778888888888887754
No 311
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=9.4e-28 Score=279.32 Aligned_cols=246 Identities=21% Similarity=0.194 Sum_probs=191.5
Q ss_pred eEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCcccc
Q 001922 96 NLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFF 175 (995)
Q Consensus 96 ~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~ 175 (995)
.++.+++.++... -.-.++|++|+|++|+|+++.+..|.++++|++|+|++|+|+++.|..|.++++|++|+|++|+++
T Consensus 58 ~v~c~~~~l~~iP-~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~ 136 (452)
T 3zyi_A 58 KVVCTRRGLSEVP-QGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT 136 (452)
T ss_dssp EEECCSSCCSSCC-SCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS
T ss_pred EEEECCCCcCccC-CCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCC
Confidence 3445555554322 111256777777777777666666666666666666666666666666666666666666666666
Q ss_pred ccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCC-CCCCccCcc
Q 001922 176 GKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSC-ELDGQIPHE 254 (995)
Q Consensus 176 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n-~l~~~~~~~ 254 (995)
+..+..|..+++|++|+|++|++++. .+..+..+++|++|++++| .+....+..
T Consensus 137 ~~~~~~~~~l~~L~~L~L~~N~l~~~-------------------------~~~~~~~l~~L~~L~l~~~~~l~~i~~~~ 191 (452)
T 3zyi_A 137 VIPSGAFEYLSKLRELWLRNNPIESI-------------------------PSYAFNRVPSLMRLDLGELKKLEYISEGA 191 (452)
T ss_dssp BCCTTTSSSCTTCCEEECCSCCCCEE-------------------------CTTTTTTCTTCCEEECCCCTTCCEECTTT
T ss_pred ccChhhhcccCCCCEEECCCCCccee-------------------------CHhHHhcCCcccEEeCCCCCCccccChhh
Confidence 55555566666666666666666532 2335667889999999995 555444557
Q ss_pred ccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcc
Q 001922 255 IGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLE 334 (995)
Q Consensus 255 ~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 334 (995)
|..+++|+.|++++|++++. | .+..+++|+.|+|++|.|++..|..|.++++|+.|++++|++++..+..|..+++|+
T Consensus 192 ~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 269 (452)
T 3zyi_A 192 FEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLV 269 (452)
T ss_dssp TTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCC
T ss_pred ccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCC
Confidence 99999999999999999954 4 588999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeccCcccccCCCcccCCCCCCeEEecCceecc
Q 001922 335 TLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTG 369 (995)
Q Consensus 335 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 369 (995)
.|+|++|++++..+..|..+++|+.|+|++|++..
T Consensus 270 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 270 ELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp EEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred EEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999999998888889999999999999999873
No 312
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=1.1e-27 Score=277.67 Aligned_cols=227 Identities=24% Similarity=0.252 Sum_probs=140.6
Q ss_pred cceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccC
Q 001922 116 LQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAG 195 (995)
Q Consensus 116 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~ 195 (995)
++.|+|++|+|+++.+..|.++++|++|+|++|+|+.+.+..|.++++|++|+|++|++++..+..|..+++|++|+|++
T Consensus 66 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 145 (440)
T 3zyj_A 66 TRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145 (440)
T ss_dssp CSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCS
T ss_pred CcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCC
Confidence 33344444444444444444455555555555555554555555556666666666666544444555566666666666
Q ss_pred CcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCC
Q 001922 196 NDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSI 275 (995)
Q Consensus 196 N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 275 (995)
|++++..+..|.++++|++|++++|+......+..+.++++|++|+|++|+++ .+
T Consensus 146 N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-------------------------~~ 200 (440)
T 3zyj_A 146 NPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-------------------------EI 200 (440)
T ss_dssp CCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-------------------------SC
T ss_pred CcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-------------------------cc
Confidence 66554444444444444444443333222222234445555666666666554 22
Q ss_pred CccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCC
Q 001922 276 PKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNG 355 (995)
Q Consensus 276 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 355 (995)
| .+..+++|+.|+|++|.|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|++++..+..|..++
T Consensus 201 ~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 279 (440)
T 3zyj_A 201 P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLH 279 (440)
T ss_dssp C-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTTSSCT
T ss_pred c-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHhcccc
Confidence 2 256677788888888888877777888888888888888888877777888888888888888888877777788888
Q ss_pred CCCeEEecCceec
Q 001922 356 KLQVLDLSSNKLT 368 (995)
Q Consensus 356 ~L~~L~L~~N~l~ 368 (995)
+|+.|+|++|++.
T Consensus 280 ~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 280 HLERIHLHHNPWN 292 (440)
T ss_dssp TCCEEECCSSCEE
T ss_pred CCCEEEcCCCCcc
Confidence 8888888888886
No 313
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=4.1e-27 Score=280.64 Aligned_cols=268 Identities=26% Similarity=0.353 Sum_probs=166.6
Q ss_pred cccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEcc
Q 001922 236 NLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLF 315 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 315 (995)
+++.|++++|.++ .+|..+. ++|+.|++++|.++. +|. .+++|++|+|++|+|++ +|. .+++|++|+++
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECc
Confidence 4778888888887 5565554 677777777777773 444 45677777777777773 443 55677777777
Q ss_pred CCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC
Q 001922 316 MNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI 395 (995)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 395 (995)
+|+|++ +|. .+++|+.|++++|++++ +|.. +++|++|+|++|++++ +|.. +.+|+.|++++|.+.+ +
T Consensus 110 ~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~-l~~~---~~~L~~L~L~~N~l~~-l 176 (622)
T 3g06_A 110 SNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLAS-LPAL---PSELCKLWAYNNQLTS-L 176 (622)
T ss_dssp SCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSC-C
T ss_pred CCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCC-cCCc---cCCCCEEECCCCCCCC-C
Confidence 777764 333 45667777777777764 4432 3667777777777663 3332 2344555555555433 2
Q ss_pred CcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCcccc
Q 001922 396 PERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLS 475 (995)
Q Consensus 396 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~ 475 (995)
| ..+++|+.|++++|.+++ +|. .+++|+.|++++|.++ .+|..
T Consensus 177 ~---~~~~~L~~L~Ls~N~l~~-------------------------l~~------~~~~L~~L~L~~N~l~-~l~~~-- 219 (622)
T 3g06_A 177 P---MLPSGLQELSVSDNQLAS-------------------------LPT------LPSELYKLWAYNNRLT-SLPAL-- 219 (622)
T ss_dssp C---CCCTTCCEEECCSSCCSC-------------------------CCC------CCTTCCEEECCSSCCS-SCCCC--
T ss_pred c---ccCCCCcEEECCCCCCCC-------------------------CCC------ccchhhEEECcCCccc-ccCCC--
Confidence 2 223444444444444432 111 1245667777777776 34432
Q ss_pred CCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeE
Q 001922 476 NFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYL 555 (995)
Q Consensus 476 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L 555 (995)
+++|+.|+|++|+|++ +| ..+++|+.|+|++|.|+ .+|. .+++|++|+|++|+|+ .+|..+.++++|+.|
T Consensus 220 -~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L 289 (622)
T 3g06_A 220 -PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTV 289 (622)
T ss_dssp -CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEE
T ss_pred -CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEE
Confidence 3667777777777774 44 34466777777777777 4555 4567777777777777 667777777777777
Q ss_pred eccccccccccCcccccCC
Q 001922 556 NLSRNHLNQNIPKSIGSMK 574 (995)
Q Consensus 556 ~L~~N~l~~~~p~~~~~l~ 574 (995)
+|++|++++.+|..+..++
T Consensus 290 ~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 290 NLEGNPLSERTLQALREIT 308 (622)
T ss_dssp ECCSCCCCHHHHHHHHHHH
T ss_pred EecCCCCCCcCHHHHHhcc
Confidence 7777777777776665544
No 314
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2.6e-28 Score=265.74 Aligned_cols=225 Identities=24% Similarity=0.210 Sum_probs=150.0
Q ss_pred ceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCC
Q 001922 117 QFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGN 196 (995)
Q Consensus 117 ~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N 196 (995)
+.++.+++.++.++.. + .++|++|++++|+|+++.+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|
T Consensus 14 ~~~~c~~~~l~~ip~~-~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-I--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSSCCTT-C--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcccCCcC-C--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 5667777777654321 1 245666666666666655556666666666666666666555666666666666666666
Q ss_pred c-ccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCC
Q 001922 197 D-LTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSI 275 (995)
Q Consensus 197 ~-l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 275 (995)
+ ++... |..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..
T Consensus 91 ~~l~~~~-------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 145 (285)
T 1ozn_A 91 AQLRSVD-------------------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP 145 (285)
T ss_dssp TTCCCCC-------------------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC
T ss_pred CCccccC-------------------------HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC
Confidence 5 44333 344555566677777777776666666677777777777777776655
Q ss_pred CccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCC
Q 001922 276 PKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNG 355 (995)
Q Consensus 276 p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 355 (995)
+..+..+++|++|+|++|.+++..+..|.++++|+.|++++|++++..|..|..+++|+.|++++|++++..+..+..++
T Consensus 146 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 225 (285)
T 1ozn_A 146 DDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLR 225 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCT
T ss_pred HhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCc
Confidence 56677777777777777777766666677777777777777777766677777777777777777777765556677777
Q ss_pred CCCeEEecCceecc
Q 001922 356 KLQVLDLSSNKLTG 369 (995)
Q Consensus 356 ~L~~L~L~~N~l~~ 369 (995)
+|++|+|++|++..
T Consensus 226 ~L~~L~l~~N~~~c 239 (285)
T 1ozn_A 226 ALQYLRLNDNPWVC 239 (285)
T ss_dssp TCCEEECCSSCEEC
T ss_pred ccCEEeccCCCccC
Confidence 77777777777764
No 315
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=4.1e-29 Score=276.24 Aligned_cols=263 Identities=19% Similarity=0.180 Sum_probs=134.4
Q ss_pred ccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCccc
Q 001922 265 FLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFT 344 (995)
Q Consensus 265 ~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 344 (995)
+++.+.+...+...+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+ +..+++|++|++++|+++
T Consensus 16 ~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~ 93 (317)
T 3o53_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQ 93 (317)
T ss_dssp SCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEE
T ss_pred eccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccc
Confidence 333343333333334444555555665555555555555555555555555555554332 555566666666666655
Q ss_pred ccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcc
Q 001922 345 GVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFI 424 (995)
Q Consensus 345 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~ 424 (995)
+.. ..++|++|++++|++++..+.. +++|+.|++++|.+.+..+..+..+++|+.|++++|
T Consensus 94 ~l~-----~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N----------- 154 (317)
T 3o53_A 94 ELL-----VGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN----------- 154 (317)
T ss_dssp EEE-----ECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS-----------
T ss_pred ccc-----CCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCC-----------
Confidence 322 2255666666666655433222 233444444444443333333333333333333333
Q ss_pred cCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccc-cCCCCCcEEEcCCCcccCCCCCCccchhh
Q 001922 425 YLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSL-SNFSSLQILLLSGNQFSGPIPPSIGELRQ 503 (995)
Q Consensus 425 ~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 503 (995)
++++..+..+ ..+++|+.|+|++|++++. |. ...+++
T Consensus 155 ----------------------------------------~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~ 192 (317)
T 3o53_A 155 ----------------------------------------EIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAK 192 (317)
T ss_dssp ----------------------------------------CCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTT
T ss_pred ----------------------------------------CCCcccHHHHhhccCcCCEEECCCCcCccc-cc-cccccc
Confidence 3333333333 2345555555555555532 21 223555
Q ss_pred hccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccccccc-cccCcccccCCcccEEecc
Q 001922 504 VLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLN-QNIPKSIGSMKSLTIADFS 582 (995)
Q Consensus 504 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~l~ls 582 (995)
|+.|+|++|+++ .+|..+..+++|++|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..++.|+.++++
T Consensus 193 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 193 LKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp CCEEECCSSCCC-EECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHH
T ss_pred CCEEECCCCcCC-cchhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECC
Confidence 666666666665 34444666666666666666665 45556666666666666666665 5556666666666666666
Q ss_pred -CCCCCCCCCC
Q 001922 583 -FNDFSGKLPE 592 (995)
Q Consensus 583 -~N~l~g~~p~ 592 (995)
.+.++|..|.
T Consensus 271 ~~~~l~~~~~~ 281 (317)
T 3o53_A 271 TVKKLTGQNEE 281 (317)
T ss_dssp HHHHHHSSSSC
T ss_pred CchhccCCchh
Confidence 4445555554
No 316
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=275.18 Aligned_cols=227 Identities=23% Similarity=0.216 Sum_probs=112.8
Q ss_pred CCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEec
Q 001922 284 NLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLS 363 (995)
Q Consensus 284 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 363 (995)
+++.|+|++|.|++..+..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 65 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 144 (440)
T 3zyj_A 65 NTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLR 144 (440)
T ss_dssp TCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECC
T ss_pred CCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCC
Confidence 44555555555554444455555555555555555554444445555555555555555554444445555555555555
Q ss_pred CceecccCCCcCcCCCccceeeccccccCCC-CCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCC
Q 001922 364 SNKLTGTIPTDLCSSNQLRILILLKNFLFGP-IPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGS 442 (995)
Q Consensus 364 ~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~ 442 (995)
+|++++..+..|..+++|+.|++++|...+. .+..+.++++|+.|++++|.++. +|.
T Consensus 145 ~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~--------------------- 202 (440)
T 3zyj_A 145 NNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPN--------------------- 202 (440)
T ss_dssp SCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCC---------------------
T ss_pred CCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccc---------------------
Confidence 5555543333444444444444444222111 12234444455555555554431 110
Q ss_pred CCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCcc
Q 001922 443 LPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAI 522 (995)
Q Consensus 443 ~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 522 (995)
...+++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|
T Consensus 203 -------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 275 (440)
T 3zyj_A 203 -------LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLF 275 (440)
T ss_dssp -------CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTTT
T ss_pred -------cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhHh
Confidence 1123345555555555555555555556666666666666655555555555555555555555554444445
Q ss_pred CcccccceeeccCCccc
Q 001922 523 GYCNHLTYLDMSQNNLS 539 (995)
Q Consensus 523 ~~l~~L~~L~Ls~N~l~ 539 (995)
..+++|+.|+|++|.+.
T Consensus 276 ~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 276 TPLHHLERIHLHHNPWN 292 (440)
T ss_dssp SSCTTCCEEECCSSCEE
T ss_pred ccccCCCEEEcCCCCcc
Confidence 55555555555555554
No 317
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=3.3e-27 Score=256.96 Aligned_cols=176 Identities=25% Similarity=0.200 Sum_probs=92.0
Q ss_pred cEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCC
Q 001922 238 VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMN 317 (995)
Q Consensus 238 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 317 (995)
++++.+++.++ .+|..+ .++|+.|++++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|+.|++++|
T Consensus 14 ~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 45666666665 333322 245555556555555544455555666666666666665555555555566666666655
Q ss_pred c-CCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCC
Q 001922 318 R-LHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIP 396 (995)
Q Consensus 318 ~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p 396 (995)
+ +.+..|..|..+++|++|++++|++++..|..+..+++|++|+|++|++++..+..+..+++|+.|++++|.+.+..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 4 554445555555555555555555555555555555555555555555554333334444444444444444433333
Q ss_pred cccccCCCCcEEEecCCccC
Q 001922 397 ERLGACYSLTRVRLGQNYLN 416 (995)
Q Consensus 397 ~~l~~l~~L~~L~l~~N~l~ 416 (995)
..+..+++|+.|++++|++.
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCC
T ss_pred HHhcCccccCEEECCCCccc
Confidence 33334444444444444433
No 318
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=8.1e-29 Score=273.89 Aligned_cols=263 Identities=17% Similarity=0.173 Sum_probs=173.2
Q ss_pred CeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCc
Q 001922 95 TNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGN 172 (995)
Q Consensus 95 ~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 172 (995)
+.++++.+.+.... .+..+++|++|+|++|+|++..+..|..+++|++|+|++|++++..+ +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 33445555543221 23445566666666666666655566666666666666666655433 556666666666666
Q ss_pred cccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccC
Q 001922 173 YFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIP 252 (995)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 252 (995)
++++.. ..++|++|++++|++++..+. .+++|++|++++|++++..+
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~----------------------------~~~~L~~L~l~~N~l~~~~~ 137 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS----------------------------RGQGKKNIYLANNKITMLRD 137 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC----------------------------CCSSCEEEECCSSCCCSGGG
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc----------------------------ccCCCCEEECCCCCCCCccc
Confidence 655322 225566666666655532211 23567888888888887777
Q ss_pred ccccCccccCccccccccccCCCCcccc-CcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCC
Q 001922 253 HEIGNLKLLDTVFLHINLLSGSIPKQLG-NLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLP 331 (995)
Q Consensus 253 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 331 (995)
..+..+++|++|++++|.+++..+..+. .+++|++|+|++|.|++..+ ...+++|+.|++++|++++ +|..+..++
T Consensus 138 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~ 214 (317)
T 3o53_A 138 LDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAA 214 (317)
T ss_dssp BCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGT
T ss_pred hhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccccc--ccccccCCEEECCCCcCCc-chhhhcccC
Confidence 7777788888888888888776666653 67888888888888875522 2347788888888888875 444477788
Q ss_pred CcceEEeccCcccccCCCcccCCCCCCeEEecCceec-ccCCCcCcCCCccceeecccc-ccCCCCC
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLT-GTIPTDLCSSNQLRILILLKN-FLFGPIP 396 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~l~~N-~l~~~~p 396 (995)
+|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ +.+|..+..+++|+.|++.++ .+.+..|
T Consensus 215 ~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 215 GVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp TCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred cccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 8888888888888 45667778888888888888887 677777777888888887743 4444444
No 319
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.3e-28 Score=269.65 Aligned_cols=236 Identities=22% Similarity=0.169 Sum_probs=118.2
Q ss_pred cccCCCCCceeeccCccccccCCccccCCCCCceeeccCCccc-ccCcccccchhhhhhhhccccccccCCCCcccCCCC
Q 001922 157 GILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLT-GKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLV 235 (995)
Q Consensus 157 ~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~ 235 (995)
.++..++|++|++++|.+ .+|..+... |++|+|++|+++ ..+|..+.. ..++ +.+++
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~-~~~~-----------------~~~l~ 95 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILF-GALR-----------------VLGIS 95 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHH-HHHH-----------------HHTTS
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHH-HHHH-----------------hcCcC
Confidence 345566677777777777 566655543 677777777773 334443330 0000 00334
Q ss_pred cccEEECcCCCCCCccCccc--cCccccCccccccccccCCCCccccCc-----CCCCeEeccCCcCcCcCCccccccCC
Q 001922 236 NLVHLDLSSCELDGQIPHEI--GNLKLLDTVFLHINLLSGSIPKQLGNL-----TNLVNLDLSNNALTGEIPYSFINLRQ 308 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~--~~l~~L~~L~l~~N~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~ 308 (995)
+|++|+|++|++++.+|..+ ..+++|++|++++|++++. |..+..+ ++|++|+|++|++++..|..|.++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 55555555555555555443 4555555555555555544 4444444 55555555555555555555555555
Q ss_pred CCEEEccCCcCCCC--CCccc--cCCCCcceEEeccCcccc---cCCCcccCCCCCCeEEecCceecccCC-CcCcCCCc
Q 001922 309 LKLFNLFMNRLHGS--IPDYL--ADLPNLETLGLWQNNFTG---VIPENLGQNGKLQVLDLSSNKLTGTIP-TDLCSSNQ 380 (995)
Q Consensus 309 L~~L~L~~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~---~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~ 380 (995)
|+.|++++|++.+. .|..+ ..+++|++|+|++|++++ .....+..+++|++|+|++|++++.+| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 55555555554432 12222 455555555555555552 111222344555555555555554443 23333445
Q ss_pred cceeeccccccCCCCCcccccCCCCcEEEecCCccCCC
Q 001922 381 LRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGS 418 (995)
Q Consensus 381 L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 418 (995)
|+.|++++|.+. .+|..+. ++|++|++++|++++.
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~ 289 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN 289 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC
Confidence 555555555544 3444333 4555555555555443
No 320
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.94 E-value=1.4e-30 Score=314.83 Aligned_cols=456 Identities=16% Similarity=0.134 Sum_probs=252.7
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCc-cccCCCCCCeEeccCCcccCccc-----------------cCcccccce
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPA-QILRLDKLTNLSLAGNNFTGSIE-----------------IGNLSSLQF 118 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~-----------------~~~l~~L~~ 118 (995)
|++|+++.. .....+++.... +..|. .+..+++|++|+|+++....... ...+++|++
T Consensus 34 ck~W~~~~~--~~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~ 109 (594)
T 2p1m_B 34 CKSWYEIER--WCRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEE 109 (594)
T ss_dssp CHHHHHHHH--HHCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCE
T ss_pred HHHHHHhhh--hhceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCe
Confidence 557888722 223345554432 22332 45678889999999875321110 235667788
Q ss_pred eccccccccCCCccccc-ccccccccccccc-ccccc-CCccccCCCCCceeeccCccccccCCcccc----CCCCCcee
Q 001922 119 LNISNNQFSGGLDWNYS-SLVNLEVFDAYNN-NFTAL-LPVGILKLEKLKYLDLGGNYFFGKIPNSYG----ELQGLEYL 191 (995)
Q Consensus 119 L~Ls~N~i~~~~~~~~~-~l~~L~~L~Ls~n-~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~----~l~~L~~L 191 (995)
|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .+++|++|
T Consensus 110 L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L 189 (594)
T 2p1m_B 110 IRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSL 189 (594)
T ss_dssp EEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEE
T ss_pred EEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEE
Confidence 88887777665555554 5677777777777 44432 333344677777777777776654443333 45577777
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCC-CCCCccCccccCccccCccc-----
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSC-ELDGQIPHEIGNLKLLDTVF----- 265 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~----- 265 (995)
+|++|. .......+..+ +..+++|++|++++| .+. .++..+..+++|+.|+
T Consensus 190 ~l~~~~-~~~~~~~l~~l---------------------~~~~~~L~~L~L~~~~~~~-~l~~~~~~~~~L~~L~l~~~~ 246 (594)
T 2p1m_B 190 NISCLA-SEVSFSALERL---------------------VTRCPNLKSLKLNRAVPLE-KLATLLQRAPQLEELGTGGYT 246 (594)
T ss_dssp ECTTCC-SCCCHHHHHHH---------------------HHHCTTCCEEECCTTSCHH-HHHHHHHHCTTCSEEECSBCC
T ss_pred EecccC-CcCCHHHHHHH---------------------HHhCCCCcEEecCCCCcHH-HHHHHHhcCCcceEccccccc
Confidence 777775 11111111111 112345555555555 222 2444455555555555
Q ss_pred --cccccccCCCCccccCcCCCCeE-eccCCcCcCcCCccccccCCCCEEEccCCcCCCCCC-ccccCCCCcceEEeccC
Q 001922 266 --LHINLLSGSIPKQLGNLTNLVNL-DLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIP-DYLADLPNLETLGLWQN 341 (995)
Q Consensus 266 --l~~N~l~~~~p~~l~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N 341 (995)
++.|.+.+ ++..+.++++|+.| .+.+... +.++..+..+++|+.|++++|.+++... ..+..+++|+.|++++|
T Consensus 247 ~~~~~~~~~~-l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 247 AEVRPDVYSG-LSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp CCCCHHHHHH-HHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CccchhhHHH-HHHHHhcCCCcccccCCcccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 33344443 34467778888888 4444332 2445555567888888888888664322 23557788888888887
Q ss_pred ccccc-CCCcccCCCCCCeEEecCc---------eecccCCCcCc-CCCccceeeccccccCCCCCcccc-cCCCCcEEE
Q 001922 342 NFTGV-IPENLGQNGKLQVLDLSSN---------KLTGTIPTDLC-SSNQLRILILLKNFLFGPIPERLG-ACYSLTRVR 409 (995)
Q Consensus 342 ~l~~~-~p~~~~~l~~L~~L~L~~N---------~l~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~ 409 (995)
++.. ++.....+++|++|+|+++ .+++.....+. .+++|+.|.+..|.+.+..+..+. .+++|+.|+
T Consensus 325 -~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~ 403 (594)
T 2p1m_B 325 -IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFR 403 (594)
T ss_dssp -GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEE
T ss_pred -cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeE
Confidence 4422 2222334778888888543 33321111111 133444444433333322222222 233344443
Q ss_pred ecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccc-----cCCccccCCCCCcEEE
Q 001922 410 LGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSG-----PLPFSLSNFSSLQILL 484 (995)
Q Consensus 410 l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~-----~~p~~~~~l~~L~~L~ 484 (995)
++.|...+ -|+++. .++..+..+++|+.|+
T Consensus 404 L~~~~~~~---------------------------------------------~~~l~~~~~~~~~~~l~~~~~~L~~L~ 438 (594)
T 2p1m_B 404 LCIIEPKA---------------------------------------------PDYLTLEPLDIGFGAIVEHCKDLRRLS 438 (594)
T ss_dssp EEESSTTC---------------------------------------------CCTTTCCCTHHHHHHHHHHCTTCCEEE
T ss_pred eecccCCC---------------------------------------------cccccCCchhhHHHHHHhhCCCccEEe
Confidence 33110000 022221 1222245567777777
Q ss_pred cCCCcccCCCCCCccc-hhhhccccccccccCCCCCCcc-CcccccceeeccCCcccCCCcc-ccccccccCeEeccccc
Q 001922 485 LSGNQFSGPIPPSIGE-LRQVLKLDLSRNSLSGEIPPAI-GYCNHLTYLDMSQNNLSGSIPP-EISNVRILNYLNLSRNH 561 (995)
Q Consensus 485 Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~ip~-~l~~l~~L~~L~L~~N~ 561 (995)
|++ .+++..+..++. +++|+.|+|++|.+++..+..+ ..+++|++|+|++|.+++..+. .+..+++|++|+|++|+
T Consensus 439 L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 439 LSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp CCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred ecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 766 555433344444 6678888888887765444444 5578888888888888654443 34458888999998888
Q ss_pred cccccCccc-ccCCcccEEeccCCCCCC
Q 001922 562 LNQNIPKSI-GSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 562 l~~~~p~~~-~~l~~L~~l~ls~N~l~g 588 (995)
++......+ ..++.|+...+..+....
T Consensus 518 ~~~~~~~~l~~~lp~l~i~~~~~~~~~~ 545 (594)
T 2p1m_B 518 VSFGACKLLGQKMPKLNVEVIDERGAPD 545 (594)
T ss_dssp CBHHHHHHHHHHCTTEEEEEECSSSCGG
T ss_pred CCHHHHHHHHHhCCCCEEEEecCCCccc
Confidence 865444445 457788777777665443
No 321
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=5.8e-28 Score=286.31 Aligned_cols=186 Identities=18% Similarity=0.098 Sum_probs=129.9
Q ss_pred eeccCceEEEEEE-eCCCcEEEEEEecCCCCC---------ChhHHHHHHHHHHhcc-CCCCceeEeEEEecCCcceEEE
Q 001922 694 IGRGGAGIVYHGK-MPNGVEIAVKKLLGFGTH---------SHDHGFRAEIQTLGNI-RHRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 694 lG~G~~g~V~~~~-~~~~~~vavK~~~~~~~~---------~~~~~~~~E~~~l~~l-~hpniv~~~~~~~~~~~~~lv~ 762 (995)
.+.|++|.+..++ .-.|+.|+||.+...... ...++|.+|+++|+++ .|+||+++++++++++..||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666665543 235888999998543211 2235689999999999 6999999999999999999999
Q ss_pred EeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCC
Q 001922 763 EYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGG 842 (995)
Q Consensus 763 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~ 842 (995)
||++|++|.+++.. ++.++.. +|+.||+.||+|+|++| ||||||||+|||++++|.+||+|||+|+......
T Consensus 322 Eyv~G~~L~d~i~~--~~~l~~~---~I~~QIl~AL~ylH~~G---IIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~ 393 (569)
T 4azs_A 322 EKLPGRLLSDMLAA--GEEIDRE---KILGSLLRSLAALEKQG---FWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC 393 (569)
T ss_dssp ECCCSEEHHHHHHT--TCCCCHH---HHHHHHHHHHHHHHHTT---CEESCCCGGGEEECTTSCEEECCCTTEESCC---
T ss_pred ecCCCCcHHHHHHh--CCCCCHH---HHHHHHHHHHHHHHHCC---ceeccCchHhEEECCCCCEEEeecccCeeCCCCC
Confidence 99999999999964 3456653 58999999999999888 9999999999999999999999999998764332
Q ss_pred CCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 001922 843 ASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPV 890 (995)
Q Consensus 843 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf 890 (995)
......+||+.|||||++.+ .+..++|+||+|++.+++.++..|+
T Consensus 394 --~~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~~ 438 (569)
T 4azs_A 394 --SWPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSNW 438 (569)
T ss_dssp --CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHH
T ss_pred --ccccCceechhhccHHHhCC-CCCCcccccccccchhhhccccchh
Confidence 23355789999999999875 4677899999999988877665543
No 322
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.6e-27 Score=275.89 Aligned_cols=240 Identities=21% Similarity=0.227 Sum_probs=184.2
Q ss_pred CcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeE
Q 001922 281 NLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVL 360 (995)
Q Consensus 281 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 360 (995)
.+++|++|+|++|.+++..|..|..+++|+.|+|++|.+++..| +..+++|++|+|++|.+++..+ .++|++|
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~-----~~~L~~L 104 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV-----GPSIETL 104 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE-----CTTCCEE
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC-----CCCcCEE
Confidence 34578888888888888777888888888888888888886555 7888888888888888885432 3788888
Q ss_pred EecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCcccc
Q 001922 361 DLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLS 440 (995)
Q Consensus 361 ~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~ 440 (995)
+|++|.+++..+.. +++|+.|++++|.+.+..|..++.+++|+.|++++|.+++.+|..+..
T Consensus 105 ~L~~N~l~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~--------------- 166 (487)
T 3oja_A 105 HAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAA--------------- 166 (487)
T ss_dssp ECCSSCCCCEEECC---CSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGG---------------
T ss_pred ECcCCcCCCCCccc---cCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhh---------------
Confidence 88888888665543 467888888888888888888888888888888888888766665531
Q ss_pred CCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCC
Q 001922 441 GSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPP 520 (995)
Q Consensus 441 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 520 (995)
.+++|+.|+|++|.|++..+ +..+++|+.|+|++|+|++ +|..++.+++|+.|+|++|.|++ +|.
T Consensus 167 -----------~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~ 231 (487)
T 3oja_A 167 -----------SSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEK 231 (487)
T ss_dssp -----------GTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECT
T ss_pred -----------hCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cch
Confidence 12456777777777775422 3357888888888888885 44458888888888888888884 777
Q ss_pred ccCcccccceeeccCCccc-CCCccccccccccCeEecccc
Q 001922 521 AIGYCNHLTYLDMSQNNLS-GSIPPEISNVRILNYLNLSRN 560 (995)
Q Consensus 521 ~~~~l~~L~~L~Ls~N~l~-~~ip~~l~~l~~L~~L~L~~N 560 (995)
.++.+++|+.|+|++|.+. +.+|..+..++.|+.++++.+
T Consensus 232 ~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~~~ 272 (487)
T 3oja_A 232 ALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTV 272 (487)
T ss_dssp TCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHHHH
T ss_pred hhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecccc
Confidence 7888888888888888887 677777888888888777643
No 323
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.93 E-value=1.9e-25 Score=240.72 Aligned_cols=217 Identities=24% Similarity=0.266 Sum_probs=121.6
Q ss_pred CCCceeeeEEeCC-CceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCccccCcccccceeccccccccCCCccc
Q 001922 55 SSVCSWAGICCSR-DRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWN 133 (995)
Q Consensus 55 ~~~C~w~gv~C~~-~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~ 133 (995)
.++|.|.|+.|+. ..++.+++++++++ .+|..+. +++++|+|++|++++ +.+..
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~----------------------~~~~~ 56 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSS----------------------LPSKA 56 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSC----------------------CCTTS
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCe----------------------eCHHH
Confidence 3689999999975 35667888888776 3565443 345555555555554 44444
Q ss_pred ccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhh
Q 001922 134 YSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLR 213 (995)
Q Consensus 134 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 213 (995)
|.++++|++|++++|+++.+.+..|.++++|++|+|++|.+++..+..|..+++|++|+|++|++++..+..|
T Consensus 57 ~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------- 129 (270)
T 2o6q_A 57 FHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVF------- 129 (270)
T ss_dssp SSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTT-------
T ss_pred hcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHh-------
Confidence 4444444444444444444444444555555555555555554444455555556666666555553332222
Q ss_pred hhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCC
Q 001922 214 EIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNN 293 (995)
Q Consensus 214 ~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N 293 (995)
..+++|++|+|++|.+++..+..|..+++|+.|++++|++++..+..|.++++|++|+|++|
T Consensus 130 ------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (270)
T 2o6q_A 130 ------------------DSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNN 191 (270)
T ss_dssp ------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSS
T ss_pred ------------------CcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCC
Confidence 23334444444444444333334444555555555555555444445666666666666666
Q ss_pred cCcCcCCccccccCCCCEEEccCCcCCC
Q 001922 294 ALTGEIPYSFINLRQLKLFNLFMNRLHG 321 (995)
Q Consensus 294 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 321 (995)
++++..+..|..+++|+.|++++|.+..
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 192 QLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 6665555556666666777777666653
No 324
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=1.4e-24 Score=235.04 Aligned_cols=216 Identities=24% Similarity=0.238 Sum_probs=107.2
Q ss_pred cCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccC
Q 001922 83 SVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILK 160 (995)
Q Consensus 83 ~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~ 160 (995)
.+|..+. ++|++|+|++|++++.. .+.++++|++|+|++|+++++. +..|.+
T Consensus 21 ~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------------------------~~~~~~ 74 (276)
T 2z62_A 21 KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIE------------------------DGAYQS 74 (276)
T ss_dssp SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEEC------------------------TTTTTT
T ss_pred ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccC------------------------HHHccC
Confidence 3454432 35666666666665432 3455555555555555554444 444445
Q ss_pred CCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEE
Q 001922 161 LEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHL 240 (995)
Q Consensus 161 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L 240 (995)
+++|++|+|++|.+++..+..|.++++|++|++++|++++..+..++++++|++|++++|.+....+|..+..+++|++|
T Consensus 75 l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L 154 (276)
T 2z62_A 75 LSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHL 154 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEE
T ss_pred CcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEE
Confidence 55555555555555444444455555555555555555433332333333333333322222222234444555556666
Q ss_pred ECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC
Q 001922 241 DLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH 320 (995)
Q Consensus 241 ~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 320 (995)
++++|++++..+..+..+++|+.+.+ .|++++|.+++..+..+.. .+|+.|++++|+++
T Consensus 155 ~Ls~N~l~~~~~~~~~~l~~L~~l~l--------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~ 213 (276)
T 2z62_A 155 DLSSNKIQSIYCTDLRVLHQMPLLNL--------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLK 213 (276)
T ss_dssp ECCSSCCCEECGGGGHHHHTCTTCCE--------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCS
T ss_pred ECCCCCCCcCCHHHhhhhhhccccce--------------------eeecCCCcccccCccccCC-CcccEEECCCCcee
Confidence 66666665544444444444441110 5566666665444444433 35666666666666
Q ss_pred CCCCccccCCCCcceEEeccCcccc
Q 001922 321 GSIPDYLADLPNLETLGLWQNNFTG 345 (995)
Q Consensus 321 ~~~p~~~~~l~~L~~L~L~~N~l~~ 345 (995)
+..+..|..+++|+.|+|++|++++
T Consensus 214 ~~~~~~~~~l~~L~~L~l~~N~~~c 238 (276)
T 2z62_A 214 SVPDGIFDRLTSLQKIWLHTNPWDC 238 (276)
T ss_dssp CCCTTTTTTCCSCCEEECCSSCBCC
T ss_pred ecCHhHhcccccccEEEccCCcccc
Confidence 5555555666666666666666654
No 325
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.91 E-value=1.9e-28 Score=296.17 Aligned_cols=408 Identities=15% Similarity=0.130 Sum_probs=219.6
Q ss_pred cccccccccccccccccccc---cCC------------ccccCCCCCceeeccCccccccCCcccc-CCCCCceeeccCC
Q 001922 133 NYSSLVNLEVFDAYNNNFTA---LLP------------VGILKLEKLKYLDLGGNYFFGKIPNSYG-ELQGLEYLSLAGN 196 (995)
Q Consensus 133 ~~~~l~~L~~L~Ls~n~i~~---~~p------------~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~L~~L~Ls~N 196 (995)
.+..+++|+.|+++++.... ..| .....+++|++|+|++|.+++..+..+. .+++|++|+|++|
T Consensus 61 ~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~ 140 (594)
T 2p1m_B 61 VIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSC 140 (594)
T ss_dssp HHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCc
Confidence 34556677777777654221 111 1123455666666666666555444443 4556666666665
Q ss_pred -ccccc-CcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCcccc----CccccCcccccccc
Q 001922 197 -DLTGK-IPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIG----NLKLLDTVFLHINL 270 (995)
Q Consensus 197 -~l~~~-~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~----~l~~L~~L~l~~N~ 270 (995)
.++.. ++..+.+++ +|++|+|++|.+++..+..+. .+++|+.|++++|.
T Consensus 141 ~~~~~~~l~~~~~~~~-------------------------~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~ 195 (594)
T 2p1m_B 141 EGFSTDGLAAIAATCR-------------------------NLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLA 195 (594)
T ss_dssp EEEEHHHHHHHHHHCT-------------------------TCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCC
T ss_pred CCCCHHHHHHHHHhCC-------------------------CCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccC
Confidence 33321 222223444 445555554444433222222 33345555554443
Q ss_pred --ccC-CCCccccCcCCCCeEeccCC-cCcCcCCccccccCCCCEEEccCCc-------CCCCCCccccCCCCcceE-Ee
Q 001922 271 --LSG-SIPKQLGNLTNLVNLDLSNN-ALTGEIPYSFINLRQLKLFNLFMNR-------LHGSIPDYLADLPNLETL-GL 338 (995)
Q Consensus 271 --l~~-~~p~~l~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L-~L 338 (995)
++. .++..+..+++|++|++++| .+++ ++..+..+++|+.|+++.+. +.+ ++..+.++++|+.| .+
T Consensus 196 ~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~L~~Ls~~ 273 (594)
T 2p1m_B 196 SEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKELRCLSGF 273 (594)
T ss_dssp SCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTTCCEEECC
T ss_pred CcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCCcccccCC
Confidence 110 01111223455566666555 2332 44455555556665543332 221 22345555666665 33
Q ss_pred ccCcccccCCCcccCCCCCCeEEecCceecccCCC-cCcCCCccceeeccccccC-CCCCcccccCCCCcEEEecCCccC
Q 001922 339 WQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPT-DLCSSNQLRILILLKNFLF-GPIPERLGACYSLTRVRLGQNYLN 416 (995)
Q Consensus 339 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~l~~N~l~-~~~p~~l~~l~~L~~L~l~~N~l~ 416 (995)
.+... +.++..+..+++|++|+|++|.+++.... .+..+++|+.|++++| +. ..++.....+++|++|++.++.-.
T Consensus 274 ~~~~~-~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~ 351 (594)
T 2p1m_B 274 WDAVP-AYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPF 351 (594)
T ss_dssp BTCCG-GGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTT
T ss_pred cccch-hhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCccc
Confidence 32222 23333344456666666666665432211 1334555666666555 22 112222234666777777443210
Q ss_pred CCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCcccc-CCCCCcEEEcC--C----Cc
Q 001922 417 GSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLS-NFSSLQILLLS--G----NQ 489 (995)
Q Consensus 417 ~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~ 489 (995)
| ....+.+++..... .....++|+.|+++.|++++..+..+. .+++|+.|+|+ + |.
T Consensus 352 g---------------~~~~~~l~~~~l~~--l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~ 414 (594)
T 2p1m_B 352 V---------------MEPNVALTEQGLVS--VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDY 414 (594)
T ss_dssp C---------------SSCSSCCCHHHHHH--HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCT
T ss_pred c---------------cccCCCCCHHHHHH--HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCccc
Confidence 0 00011111000000 001135688888888888866666665 58999999999 4 56
Q ss_pred ccCCCC-----CCccchhhhccccccccccCCCCCCccCc-ccccceeeccCCcccCCCcccc-ccccccCeEecccccc
Q 001922 490 FSGPIP-----PSIGELRQVLKLDLSRNSLSGEIPPAIGY-CNHLTYLDMSQNNLSGSIPPEI-SNVRILNYLNLSRNHL 562 (995)
Q Consensus 490 l~~~~p-----~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~ip~~l-~~l~~L~~L~L~~N~l 562 (995)
+++... ..+..+++|+.|+|++ .+++..+..++. +++|++|+|++|.+++..+..+ ..+++|+.|+|++|++
T Consensus 415 l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 415 LTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp TTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSC
T ss_pred ccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCC
Confidence 652211 1256678999999987 677655556665 8899999999999987666666 6789999999999999
Q ss_pred ccccCc-ccccCCcccEEeccCCCCC
Q 001922 563 NQNIPK-SIGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 563 ~~~~p~-~~~~l~~L~~l~ls~N~l~ 587 (995)
++..+. .+..+++|+.|++++|+++
T Consensus 494 ~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 494 GDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp CHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred cHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 765544 4455899999999999874
No 326
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=7.1e-25 Score=236.51 Aligned_cols=227 Identities=28% Similarity=0.323 Sum_probs=128.7
Q ss_pred CCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCcc
Q 001922 94 LTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNY 173 (995)
Q Consensus 94 L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~ 173 (995)
+..+++..+.+.+......+++|+.|++++|.++.. ..+..+++|++|+|++|.
T Consensus 21 l~~l~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~--------------------------~~l~~l~~L~~L~l~~n~ 74 (272)
T 3rfs_A 21 TIKANLKKKSVTDAVTQNELNSIDQIIANNSDIKSV--------------------------QGIQYLPNVRYLALGGNK 74 (272)
T ss_dssp HHHHHHTCSCTTSEECHHHHTTCCEEECTTSCCCCC--------------------------TTGGGCTTCCEEECTTSC
T ss_pred HHHHHhcCcccccccccccccceeeeeeCCCCcccc--------------------------cccccCCCCcEEECCCCC
Confidence 334455555555444455555555555555555432 234555566666666666
Q ss_pred ccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCc
Q 001922 174 FFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPH 253 (995)
Q Consensus 174 l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~ 253 (995)
+++ + ..++.+++|++|+|++|.+++..+..|+ .+++|++|++++|++++..+.
T Consensus 75 l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~~-------------------------~l~~L~~L~L~~n~l~~~~~~ 127 (272)
T 3rfs_A 75 LHD-I-SALKELTNLTYLILTGNQLQSLPNGVFD-------------------------KLTNLKELVLVENQLQSLPDG 127 (272)
T ss_dssp CCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTTT-------------------------TCTTCCEEECTTSCCCCCCTT
T ss_pred CCC-c-hhhcCCCCCCEEECCCCccCccChhHhc-------------------------CCcCCCEEECCCCcCCccCHH
Confidence 553 2 2455666666666666665543332222 233444444444444444444
Q ss_pred cccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCc
Q 001922 254 EIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNL 333 (995)
Q Consensus 254 ~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 333 (995)
.+..+++|++|++++|++++..+..+..+++|++|++++|++++..+..|.++++|+.|++++|++++..+..+..+++|
T Consensus 128 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 207 (272)
T 3rfs_A 128 VFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSL 207 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC
T ss_pred HhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCC
Confidence 44455555555555555554444455666666666666666666655566666666666666666666666666667777
Q ss_pred ceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCc
Q 001922 334 ETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQ 380 (995)
Q Consensus 334 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 380 (995)
+.|++++|.+.+. +++|++|+++.|.++|.+|..++.+..
T Consensus 208 ~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 208 QYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp CEEECCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CEEEccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 7777777766543 335677777777777777777665544
No 327
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=5.3e-24 Score=230.38 Aligned_cols=229 Identities=22% Similarity=0.186 Sum_probs=108.2
Q ss_pred EeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCcee
Q 001922 288 LDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKL 367 (995)
Q Consensus 288 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 367 (995)
.+.++..++ .+|..+. ++|+.|++++|++++..+..|.++++|++|++++|++++..+..|..+++|++|+|++|++
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 88 (276)
T 2z62_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (276)
T ss_dssp EECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCcc
Confidence 344444444 3333332 3455555555555544444455555555555555555544444444555555555555554
Q ss_pred cccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCC
Q 001922 368 TGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENG 447 (995)
Q Consensus 368 ~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~ 447 (995)
++.. +..+.++++|++|++++|.+.+..+..+..
T Consensus 89 ~~~~------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~---------------------- 122 (276)
T 2z62_A 89 QSLA------------------------LGAFSGLSSLQKLVAVETNLASLENFPIGH---------------------- 122 (276)
T ss_dssp CEEC------------------------TTTTTTCTTCCEEECTTSCCCCSTTCCCTT----------------------
T ss_pred CccC------------------------hhhhcCCccccEEECCCCCccccCchhccc----------------------
Confidence 4333 334444444455555554444322222211
Q ss_pred CCCCCCCCCcEEEcCCCccccc-CCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCccc
Q 001922 448 NSSSNPDRLGQLNLSNNLLSGP-LPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCN 526 (995)
Q Consensus 448 ~~~~~~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 526 (995)
+++|++|++++|++++. +|..+.++++|+.|+|++|++++..+..+..+.+|+.|++
T Consensus 123 -----l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l----------------- 180 (276)
T 2z62_A 123 -----LKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNL----------------- 180 (276)
T ss_dssp -----CTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCE-----------------
T ss_pred -----CCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccce-----------------
Confidence 22344444444444432 3555555556666666666655444444555544441110
Q ss_pred ccceeeccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 527 HLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 527 ~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
+|++++|++++ +|.......+|++|+|++|++++..+..+..+++|+.|++++|++++..|
T Consensus 181 ---~L~ls~n~l~~-~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 181 ---SLDLSLNPMNF-IQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ---EEECCSSCCCE-ECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred ---eeecCCCcccc-cCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 45555555553 22222223355555555555555444445555666666666666655544
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.2e-24 Score=232.65 Aligned_cols=229 Identities=23% Similarity=0.216 Sum_probs=186.7
Q ss_pred ccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhc
Q 001922 138 VNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYL 217 (995)
Q Consensus 138 ~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L 217 (995)
.++..+++..+.+... ..+..+++|+.|++++|.++ .++ .++.+++|++|+|++|++++.
T Consensus 19 ~~l~~l~l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~~---------------- 78 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA--VTQNELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHDI---------------- 78 (272)
T ss_dssp HHHHHHHHTCSCTTSE--ECHHHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCCC----------------
T ss_pred HHHHHHHhcCcccccc--cccccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCCc----------------
Confidence 3444555555555543 34556778888888888876 333 477788888888888887731
Q ss_pred cccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcC
Q 001922 218 GYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTG 297 (995)
Q Consensus 218 ~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 297 (995)
..+..+++|++|++++|.+++..+..+..+++|++|++++|++++..+..|..+++|++|++++|.+++
T Consensus 79 -----------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~ 147 (272)
T 3rfs_A 79 -----------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQS 147 (272)
T ss_dssp -----------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred -----------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCc
Confidence 134456789999999999998888888999999999999999998888888999999999999999998
Q ss_pred cCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcC
Q 001922 298 EIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCS 377 (995)
Q Consensus 298 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 377 (995)
..+..|..+++|+.|++++|++++..+..+..+++|+.|++++|++++..|..+..+++|++|+|++|++.+.
T Consensus 148 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~------- 220 (272)
T 3rfs_A 148 LPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT------- 220 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC-------
T ss_pred cCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc-------
Confidence 8888889999999999999999988888889999999999999999988888889999999999999988744
Q ss_pred CCccceeeccccccCCCCCcccccCCC
Q 001922 378 SNQLRILILLKNFLFGPIPERLGACYS 404 (995)
Q Consensus 378 l~~L~~L~l~~N~l~~~~p~~l~~l~~ 404 (995)
++.|+.|++..|.+.|.+|..++.+..
T Consensus 221 ~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 221 CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 446888888888888888888776654
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.91 E-value=6e-25 Score=259.05 Aligned_cols=186 Identities=15% Similarity=0.193 Sum_probs=145.5
Q ss_pred cCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCCh-------hHHHHHHHHHHhccCCCCceeEeEEEecCCcceEE
Q 001922 689 KDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSH-------DHGFRAEIQTLGNIRHRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 689 ~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 761 (995)
...+.||+|+||+||+|+. .++.+++|+......... .+++.+|++++++++||||+++..++...+..|+|
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4567899999999999955 578899998744222211 24478999999999999999666666677788999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccC
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDG 841 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~ 841 (995)
|||+++++|.+++.. +..++.|+++||.|||+++ |+||||||+||+++. .+||+|||+++.....
T Consensus 418 mE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~g---IiHrDiKp~NILl~~--~~kL~DFGla~~~~~~ 482 (540)
T 3en9_A 418 MSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKND---VIHNDLTTSNFIFDK--DLYIIDFGLGKISNLD 482 (540)
T ss_dssp EECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTT---EECTTCCTTSEEESS--SEEECCCTTCEECCCH
T ss_pred EECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCc---CccCCCCHHHEEECC--eEEEEECccCEECCCc
Confidence 999999999999964 4579999999999999887 999999999999999 9999999999976432
Q ss_pred CCCc-----cccccccCccccccccccc--CCCCcccchhhHHHHHHHHHhCCCCC
Q 001922 842 GASE-----CMSAIAGSYGYIAPEYAYT--LRVDEKSDVYSFGVVLLELLTGRRPV 890 (995)
Q Consensus 842 ~~~~-----~~~~~~gt~~y~aPE~~~~--~~~~~~~DvwSlGvil~elltg~~Pf 890 (995)
.... ......||+.|+|||++.. ..|+...|+|+..+-..+-+.++.+|
T Consensus 483 ~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY 538 (540)
T 3en9_A 483 EDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY 538 (540)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred cccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence 1111 1235679999999999987 56888899999999988888877776
No 330
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.91 E-value=3.2e-26 Score=255.62 Aligned_cols=265 Identities=20% Similarity=0.202 Sum_probs=167.4
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCccccCC--CCCCeEeccCCcccCcc-ccCcccccceeccccccccCC-Ccc
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRL--DKLTNLSLAGNNFTGSI-EIGNLSSLQFLNISNNQFSGG-LDW 132 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~Ls~N~i~~~-~~~ 132 (995)
|..|+++.|+...++.+|++++++. +..+..+ ++++.|++++|.+++.. .+..+++|++|+|++|.+++. .+.
T Consensus 36 c~~W~~~~~~~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~ 112 (336)
T 2ast_B 36 CKRWYRLASDESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHG 112 (336)
T ss_dssp CHHHHHHHTCSTTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHH
T ss_pred HHHHHHHhcCchhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHH
Confidence 5679999987666788888887765 4455555 77778888887777643 456677777777777776654 555
Q ss_pred cccccccccccccccccccccCCccccCCCCCceeeccCc-ccccc-CCccccCCCCCceeeccCC-ccccc-Ccccccc
Q 001922 133 NYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGN-YFFGK-IPNSYGELQGLEYLSLAGN-DLTGK-IPGELGN 208 (995)
Q Consensus 133 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~~l~~l~~L~~L~Ls~N-~l~~~-~~~~l~~ 208 (995)
.+..+++|++|++++|.+++..+..++.+++|++|+|++| .+++. ++..+..+++|++|+|++| .+++. ++..+.
T Consensus 113 ~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~- 191 (336)
T 2ast_B 113 ILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVA- 191 (336)
T ss_dssp HHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHH-
T ss_pred HHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHH-
Confidence 5666667777777766666656666666666666666666 45542 4555666666666666666 66542 333334
Q ss_pred hhhhhhhhccccccccCCCCcccCCCC-cccEEECcCC--CCC-CccCccccCccccCcccccccc-ccCCCCccccCcC
Q 001922 209 LTNLREIYLGYYNVFEGGIPREVGKLV-NLVHLDLSSC--ELD-GQIPHEIGNLKLLDTVFLHINL-LSGSIPKQLGNLT 283 (995)
Q Consensus 209 l~~L~~L~L~~n~~~~~~~p~~~~~l~-~L~~L~Ls~n--~l~-~~~~~~~~~l~~L~~L~l~~N~-l~~~~p~~l~~l~ 283 (995)
.++ +|++|++++| .++ +.++..+..+++|+.|++++|. +++..+..+..++
T Consensus 192 ------------------------~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~ 247 (336)
T 2ast_B 192 ------------------------HVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLN 247 (336)
T ss_dssp ------------------------HSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCT
T ss_pred ------------------------hcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCC
Confidence 444 5555666555 333 2344455556666666666666 5545555666677
Q ss_pred CCCeEeccCCc-CcCcCCccccccCCCCEEEccCCcCCCCCCccccCC-CCcceEEeccCcccccCCCcccC
Q 001922 284 NLVNLDLSNNA-LTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADL-PNLETLGLWQNNFTGVIPENLGQ 353 (995)
Q Consensus 284 ~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~ 353 (995)
+|++|++++|. +.......+.++++|+.|++++| ++.. .+..+ .+|+.|++++|++++..|..++.
T Consensus 248 ~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~~~---~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 248 YLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VPDG---TLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp TCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SCTT---CHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cCHH---HHHHHHhhCcceEEecccCccccCCcccc
Confidence 77777777774 32222235666777777777777 3322 23333 23666667888888777776664
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=7.5e-24 Score=233.27 Aligned_cols=227 Identities=17% Similarity=0.154 Sum_probs=159.2
Q ss_pred CCCCeEeccCCcccCcc-----ccCcccccceeccccccccCCCcccc--cccccccccccccccccccCC----ccccC
Q 001922 92 DKLTNLSLAGNNFTGSI-----EIGNLSSLQFLNISNNQFSGGLDWNY--SSLVNLEVFDAYNNNFTALLP----VGILK 160 (995)
Q Consensus 92 ~~L~~L~L~~n~l~~~~-----~~~~l~~L~~L~Ls~N~i~~~~~~~~--~~l~~L~~L~Ls~n~i~~~~p----~~~~~ 160 (995)
..++.|.++++.++... ....+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..+ ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 34677777777765321 23345668888888888887777776 777788888888887776544 34456
Q ss_pred CCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEE
Q 001922 161 LEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHL 240 (995)
Q Consensus 161 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L 240 (995)
+++|++|+|++|++++..|..|+.+++|++|+|++|++.+... -..+..+..+++|++|
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~---------------------~~~~~~~~~l~~L~~L 202 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG---------------------LMAALCPHKFPAIQNL 202 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH---------------------HHTTSCTTSSCCCCSC
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh---------------------hhHHHhhhcCCCCCEE
Confidence 7777777777777776667777777777777777777653200 0011223456677777
Q ss_pred ECcCCCCCCccCc----cccCccccCccccccccccCCCCccccCc---CCCCeEeccCCcCcCcCCccccccCCCCEEE
Q 001922 241 DLSSCELDGQIPH----EIGNLKLLDTVFLHINLLSGSIPKQLGNL---TNLVNLDLSNNALTGEIPYSFINLRQLKLFN 313 (995)
Q Consensus 241 ~Ls~n~l~~~~~~----~~~~l~~L~~L~l~~N~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 313 (995)
+|++|+++. ++. .+..+++|++|+|++|++++..|..+..+ ++|++|+|++|+|+ .+|..+. ++|+.|+
T Consensus 203 ~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~ 278 (310)
T 4glp_A 203 ALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLD 278 (310)
T ss_dssp BCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEE
T ss_pred ECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEE
Confidence 777777763 222 24667788888888888887767666666 58888888888888 5566664 7888899
Q ss_pred ccCCcCCCCCCccccCCCCcceEEeccCcccc
Q 001922 314 LFMNRLHGSIPDYLADLPNLETLGLWQNNFTG 345 (995)
Q Consensus 314 L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 345 (995)
|++|+|++. |. +..+++|+.|+|++|+++.
T Consensus 279 Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 279 LSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999988854 33 6778889999999998874
No 332
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=2.9e-23 Score=225.64 Aligned_cols=203 Identities=26% Similarity=0.219 Sum_probs=142.8
Q ss_pred ccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhh
Q 001922 134 YSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLR 213 (995)
Q Consensus 134 ~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~ 213 (995)
++++++++++++++|+++. +|..+. +++++|+|++|.+++..|..|..+++|++|+|++|.+++..
T Consensus 6 ~~~l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----------- 71 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQ----------- 71 (290)
T ss_dssp EECSTTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEE-----------
T ss_pred ccccCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCccc-----------
Confidence 4555666666666666665 333332 45666666666666555566666666666666666665321
Q ss_pred hhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCC
Q 001922 214 EIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNN 293 (995)
Q Consensus 214 ~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N 293 (995)
. ...+++|++|+|++|+++ .+|..+..+++|++|++++|++++..+..|.++++|++|+|++|
T Consensus 72 ---------------~-~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N 134 (290)
T 1p9a_G 72 ---------------V-DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGN 134 (290)
T ss_dssp ---------------C-CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTS
T ss_pred ---------------C-CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCC
Confidence 1 135567888888888887 56667777777777778877777666677788888888888888
Q ss_pred cCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceec
Q 001922 294 ALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 294 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 368 (995)
+|++..+..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+++ .+|..+..+.+|+.|+|++|++.
T Consensus 135 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 135 ELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 888777777777888888888888888666666777888888888888887 56666777778888888888775
No 333
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=1.7e-22 Score=217.73 Aligned_cols=201 Identities=26% Similarity=0.218 Sum_probs=120.4
Q ss_pred cccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEcc
Q 001922 236 NLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLF 315 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 315 (995)
+.+.+++++++++ .+|..+. +.|+.|++++|++++..+..|.++++|++|+|++|.++...+..|.++++|+.|+++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~ 93 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVT 93 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECC
T ss_pred CCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECC
Confidence 3556666666666 3444333 456666666666665555566666666666666666665555555666666666666
Q ss_pred CCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC
Q 001922 316 MNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI 395 (995)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 395 (995)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..|..+++|+.|++++|.+.+..
T Consensus 94 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 173 (270)
T 2o6q_A 94 DNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVP 173 (270)
T ss_dssp SSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeC
Confidence 66666555555666666666666666666655555666666666666666666444444566666666666666666555
Q ss_pred CcccccCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCccc
Q 001922 396 PERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYL 439 (995)
Q Consensus 396 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l 439 (995)
+..+..+++|+.|++++|++++..+..|..+++|+.+++++|.+
T Consensus 174 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 217 (270)
T 2o6q_A 174 EGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPW 217 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred hhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCe
Confidence 55566666666666666666655444454444444444444433
No 334
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=4.2e-23 Score=224.38 Aligned_cols=205 Identities=22% Similarity=0.147 Sum_probs=173.0
Q ss_pred ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCC
Q 001922 109 EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGL 188 (995)
Q Consensus 109 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L 188 (995)
++.++++|++|++++|.++.+++... +++++|+|++|+|+++.|..|..+++|++|+|++|.+++..+ .+.+++|
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 79 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVL 79 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTC
T ss_pred cccccCCccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcC
Confidence 46788999999999999997655433 689999999999999999999999999999999999985443 3789999
Q ss_pred ceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCcccccc
Q 001922 189 EYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHI 268 (995)
Q Consensus 189 ~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~ 268 (995)
++|+|++|+++ .+| ..+..+++|++|+|++|++++..+..|..+++|++|++++
T Consensus 80 ~~L~Ls~N~l~-~l~-------------------------~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~ 133 (290)
T 1p9a_G 80 GTLDLSHNQLQ-SLP-------------------------LLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKG 133 (290)
T ss_dssp CEEECCSSCCS-SCC-------------------------CCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTT
T ss_pred CEEECCCCcCC-cCc-------------------------hhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCC
Confidence 99999999987 333 3345566788888888888877777888888888888888
Q ss_pred ccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccc
Q 001922 269 NLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTG 345 (995)
Q Consensus 269 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 345 (995)
|++++..+..|..+++|+.|+|++|+|++..+..|.++++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.+..
T Consensus 134 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 134 NELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCccC
Confidence 8888777777888899999999999999777777888999999999999998 677777788899999999998863
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=3e-25 Score=250.13 Aligned_cols=266 Identities=19% Similarity=0.179 Sum_probs=159.7
Q ss_pred EEECcCCCCCCccCccccCccccCccccccccccCCCC----ccccCcC-CCCeEeccCCcCcCcCCcccccc-----CC
Q 001922 239 HLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIP----KQLGNLT-NLVNLDLSNNALTGEIPYSFINL-----RQ 308 (995)
Q Consensus 239 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p----~~l~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~ 308 (995)
+++++.|.+++.+|..+...++|++|++++|.+++..+ ..+..++ +|++|+|++|.|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 35677777777777666666667777777777776555 5666777 77777777777777666666665 77
Q ss_pred CCEEEccCCcCCCCCCcccc----CC-CCcceEEeccCcccccCCCcccC-----CCCCCeEEecCceecccCCCcCcCC
Q 001922 309 LKLFNLFMNRLHGSIPDYLA----DL-PNLETLGLWQNNFTGVIPENLGQ-----NGKLQVLDLSSNKLTGTIPTDLCSS 378 (995)
Q Consensus 309 L~~L~L~~N~l~~~~p~~~~----~l-~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~L~~N~l~~~~p~~~~~l 378 (995)
|+.|+|++|++++..+..+. .+ ++|++|+|++|++++..+..+.. .++|++|+|++|++++..+..+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l--- 158 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL--- 158 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH---
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH---
Confidence 77777777777765555333 33 67777777777777655444332 2467777777777764322221
Q ss_pred CccceeeccccccCCCCCcccccCC-CCcEEEecCCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCC-CCC
Q 001922 379 NQLRILILLKNFLFGPIPERLGACY-SLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNP-DRL 456 (995)
Q Consensus 379 ~~L~~L~l~~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~-~~L 456 (995)
+..+..+. +|++|++++|++++..+..+... .... .+|
T Consensus 159 -----------------~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~-----------------------l~~~~~~L 198 (362)
T 3goz_A 159 -----------------IQILAAIPANVNSLNLRGNNLASKNCAELAKF-----------------------LASIPASV 198 (362)
T ss_dssp -----------------HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHH-----------------------HHTSCTTC
T ss_pred -----------------HHHHhcCCccccEeeecCCCCchhhHHHHHHH-----------------------HHhCCCCC
Confidence 12222232 56666666666654433322111 0001 245
Q ss_pred cEEEcCCCccccc----CCccccC-CCCCcEEEcCCCcccCCCC----CCccchhhhccccccccccCCC-------CCC
Q 001922 457 GQLNLSNNLLSGP----LPFSLSN-FSSLQILLLSGNQFSGPIP----PSIGELRQVLKLDLSRNSLSGE-------IPP 520 (995)
Q Consensus 457 ~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~-------~p~ 520 (995)
++|+|++|.+++. ++..+.. .++|+.|+|++|++++..+ ..+..+++|+.|+|++|.+.+. ++.
T Consensus 199 ~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~ 278 (362)
T 3goz_A 199 TSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGA 278 (362)
T ss_dssp CEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHT
T ss_pred CEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHH
Confidence 5566666665532 3444444 3477777777777765433 2345566777777777774432 233
Q ss_pred ccCcccccceeeccCCcccCCCccccc
Q 001922 521 AIGYCNHLTYLDMSQNNLSGSIPPEIS 547 (995)
Q Consensus 521 ~~~~l~~L~~L~Ls~N~l~~~ip~~l~ 547 (995)
.+..+++|++|||++|++.+..|..+.
T Consensus 279 ~~~~l~~L~~LdL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 279 AFPNIQKIILVDKNGKEIHPSHSIPIS 305 (362)
T ss_dssp TSTTCCEEEEECTTSCBCCGGGCHHHH
T ss_pred HhccCCceEEEecCCCcCCCcchHHHH
Confidence 566777788888888887765454443
No 336
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=5.3e-25 Score=248.05 Aligned_cols=111 Identities=18% Similarity=0.232 Sum_probs=58.4
Q ss_pred CCcEEEcCCCcccCCCCCCccch-----hhhccccccccccCCC----CCCccCc-ccccceeeccCCcccCCCc----c
Q 001922 479 SLQILLLSGNQFSGPIPPSIGEL-----RQVLKLDLSRNSLSGE----IPPAIGY-CNHLTYLDMSQNNLSGSIP----P 544 (995)
Q Consensus 479 ~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~ip----~ 544 (995)
+|+.|+|++|++++..+..++.. ++|+.|||++|.+++. ++..+.. .++|++|+|++|.+++..+ .
T Consensus 168 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 247 (362)
T 3goz_A 168 NVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKL 247 (362)
T ss_dssp TCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHH
T ss_pred cccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHH
Confidence 45555555555543333333322 3455555555555431 3333333 2366666666666664433 2
Q ss_pred ccccccccCeEeccccccccc-------cCcccccCCcccEEeccCCCCCCC
Q 001922 545 EISNVRILNYLNLSRNHLNQN-------IPKSIGSMKSLTIADFSFNDFSGK 589 (995)
Q Consensus 545 ~l~~l~~L~~L~L~~N~l~~~-------~p~~~~~l~~L~~l~ls~N~l~g~ 589 (995)
.+..+++|+.|+|++|++.+. ++..+..+++|+.||+++|++.+.
T Consensus 248 ~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 248 LKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp TTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 234556666666666664322 334566677777777777776654
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=2.2e-23 Score=229.51 Aligned_cols=224 Identities=19% Similarity=0.130 Sum_probs=157.8
Q ss_pred ccceeccccccccCCCcc---cccccccccccccccccccccCCccc--cCCCCCceeeccCccccccCC----ccccCC
Q 001922 115 SLQFLNISNNQFSGGLDW---NYSSLVNLEVFDAYNNNFTALLPVGI--LKLEKLKYLDLGGNYFFGKIP----NSYGEL 185 (995)
Q Consensus 115 ~L~~L~Ls~N~i~~~~~~---~~~~l~~L~~L~Ls~n~i~~~~p~~~--~~l~~L~~L~L~~N~l~~~~p----~~l~~l 185 (995)
.++.|.+.++.++...-. .+..+++|++|++++|++++..|..+ ..+++|++|+|++|.+++..+ ..+..+
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~ 144 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLK 144 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBC
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhc
Confidence 456666666655421100 11223446666666666665555555 555666666666666654333 223345
Q ss_pred CCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCc--c--CccccCcccc
Q 001922 186 QGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQ--I--PHEIGNLKLL 261 (995)
Q Consensus 186 ~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~--~--~~~~~~l~~L 261 (995)
++|++|+|++|++++. .+..+..+++|++|+|++|++.+. + +..+..+++|
T Consensus 145 ~~L~~L~Ls~n~l~~~-------------------------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L 199 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAF-------------------------SCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAI 199 (310)
T ss_dssp SCCCEEEEECCSSCCC-------------------------CTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCC
T ss_pred cCCCEEEeeCCCcchh-------------------------hHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCC
Confidence 5555555555555533 345566778889999999988652 2 2334789999
Q ss_pred CccccccccccCCCCc----cccCcCCCCeEeccCCcCcCcCCcccccc---CCCCEEEccCCcCCCCCCccccCCCCcc
Q 001922 262 DTVFLHINLLSGSIPK----QLGNLTNLVNLDLSNNALTGEIPYSFINL---RQLKLFNLFMNRLHGSIPDYLADLPNLE 334 (995)
Q Consensus 262 ~~L~l~~N~l~~~~p~----~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 334 (995)
++|++++|+++. ++. .+.++++|++|+|++|+|++..|..+..+ ++|+.|+|++|+|+ .+|..+. ++|+
T Consensus 200 ~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~ 275 (310)
T 4glp_A 200 QNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLR 275 (310)
T ss_dssp CSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCS
T ss_pred CEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCC
Confidence 999999999973 333 35788999999999999998888888776 69999999999999 6677664 8999
Q ss_pred eEEeccCcccccCCCcccCCCCCCeEEecCceecc
Q 001922 335 TLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTG 369 (995)
Q Consensus 335 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 369 (995)
.|+|++|++++. |. +..+++|+.|+|++|+|+.
T Consensus 276 ~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 276 VLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred EEECCCCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 999999999964 44 7888999999999999874
No 338
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.88 E-value=1.8e-24 Score=241.44 Aligned_cols=253 Identities=19% Similarity=0.237 Sum_probs=131.1
Q ss_pred CCeEeccCCcccCccccCcc--cccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccC
Q 001922 94 LTNLSLAGNNFTGSIEIGNL--SSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGG 171 (995)
Q Consensus 94 L~~L~L~~n~l~~~~~~~~l--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~ 171 (995)
++.+++++|.+.. ..+..+ ++++.|++++|.+++..+. +..+++|++|+|++
T Consensus 49 ~~~l~l~~~~~~~-~~~~~~~~~~l~~L~l~~n~l~~~~~~-------------------------~~~~~~L~~L~L~~ 102 (336)
T 2ast_B 49 WQTLDLTGKNLHP-DVTGRLLSQGVIAFRCPRSFMDQPLAE-------------------------HFSPFRVQHMDLSN 102 (336)
T ss_dssp SSEEECTTCBCCH-HHHHHHHHTTCSEEECTTCEECSCCCS-------------------------CCCCBCCCEEECTT
T ss_pred heeeccccccCCH-HHHHhhhhccceEEEcCCccccccchh-------------------------hccCCCCCEEEccC
Confidence 4556666555542 223333 4555555555555544333 23344444455554
Q ss_pred cccccc-CCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccC-CCCcccCCCCcccEEECcCC-CCC
Q 001922 172 NYFFGK-IPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEG-GIPREVGKLVNLVHLDLSSC-ELD 248 (995)
Q Consensus 172 N~l~~~-~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~-~~p~~~~~l~~L~~L~Ls~n-~l~ 248 (995)
|.+++. +|..+..+++|++|+|++|.+++..+..++.+++|++|++++|..+.+ .++..+..+++|++|++++| .++
T Consensus 103 ~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~ 182 (336)
T 2ast_B 103 SVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFT 182 (336)
T ss_dssp CEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCC
T ss_pred CCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcC
Confidence 444433 444444445555555555544444444444444444444433311111 13333445667777777777 776
Q ss_pred Cc-cCccccCcc-ccCccccccc--ccc-CCCCccccCcCCCCeEeccCCc-CcCcCCccccccCCCCEEEccCCc-CCC
Q 001922 249 GQ-IPHEIGNLK-LLDTVFLHIN--LLS-GSIPKQLGNLTNLVNLDLSNNA-LTGEIPYSFINLRQLKLFNLFMNR-LHG 321 (995)
Q Consensus 249 ~~-~~~~~~~l~-~L~~L~l~~N--~l~-~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~-l~~ 321 (995)
+. ++..+..++ +|++|++++| .++ +.+|..+..+++|++|++++|. +++..+..+..+++|+.|++++|. +..
T Consensus 183 ~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~ 262 (336)
T 2ast_B 183 EKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIP 262 (336)
T ss_dssp HHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCG
T ss_pred hHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCH
Confidence 43 455566666 7777777777 333 3345555666677777777776 555556666666666666666664 221
Q ss_pred CCCccccCCCCcceEEeccCcccccCCCcccCC-CCCCeEEecCceecccCCCcCc
Q 001922 322 SIPDYLADLPNLETLGLWQNNFTGVIPENLGQN-GKLQVLDLSSNKLTGTIPTDLC 376 (995)
Q Consensus 322 ~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~ 376 (995)
.....+..+++|+.|++++| ++ ...+..+ ..|+.|++++|++++..|..++
T Consensus 263 ~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 263 ETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp GGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCccc
Confidence 11124555666666666666 22 1123332 2255555666666655555443
No 339
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=2.7e-22 Score=220.27 Aligned_cols=209 Identities=24% Similarity=0.312 Sum_probs=126.3
Q ss_pred eEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCcccc
Q 001922 96 NLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFF 175 (995)
Q Consensus 96 ~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~ 175 (995)
.+.+..+.+++......+++|++|++++|.++... .+..+++|++|++++|+++++.+ +..+++|++|+|++|.++
T Consensus 23 ~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 23 KIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HHHTTCSSTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCS
T ss_pred HHHhCCCCcCceecHHHcCCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCC
Confidence 34455555555555566667777777777666532 45566666666666666666433 666666666666666665
Q ss_pred ccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccc
Q 001922 176 GKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEI 255 (995)
Q Consensus 176 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~ 255 (995)
+ ++ .+..+++|++|+|++|++++. + .+..+++|++|++++|.+++..+ +
T Consensus 99 ~-~~-~~~~l~~L~~L~l~~n~l~~~-~--------------------------~l~~l~~L~~L~l~~n~l~~~~~--l 147 (308)
T 1h6u_A 99 N-VS-AIAGLQSIKTLDLTSTQITDV-T--------------------------PLAGLSNLQVLYLDLNQITNISP--L 147 (308)
T ss_dssp C-CG-GGTTCTTCCEEECTTSCCCCC-G--------------------------GGTTCTTCCEEECCSSCCCCCGG--G
T ss_pred C-ch-hhcCCCCCCEEECCCCCCCCc-h--------------------------hhcCCCCCCEEECCCCccCcCcc--c
Confidence 3 22 466666666666666666532 1 13344556666666666654332 5
Q ss_pred cCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcce
Q 001922 256 GNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLET 335 (995)
Q Consensus 256 ~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 335 (995)
..+++|+.|++++|++++..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.
T Consensus 148 ~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~ 221 (308)
T 1h6u_A 148 AGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFI 221 (308)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCE
T ss_pred cCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCCCCE
Confidence 556666666666666664322 6666677777777777664433 6666677777777777664432 666677777
Q ss_pred EEeccCcccc
Q 001922 336 LGLWQNNFTG 345 (995)
Q Consensus 336 L~L~~N~l~~ 345 (995)
|++++|++++
T Consensus 222 L~l~~N~i~~ 231 (308)
T 1h6u_A 222 VTLTNQTITN 231 (308)
T ss_dssp EEEEEEEEEC
T ss_pred EEccCCeeec
Confidence 7777777663
No 340
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.7e-24 Score=246.54 Aligned_cols=248 Identities=20% Similarity=0.194 Sum_probs=146.8
Q ss_pred CCccccCCCCCceeeccCccccccCC----ccccCCCCCceeeccCCc---ccccCcccccchhhhhhhhccccccccCC
Q 001922 154 LPVGILKLEKLKYLDLGGNYFFGKIP----NSYGELQGLEYLSLAGND---LTGKIPGELGNLTNLREIYLGYYNVFEGG 226 (995)
Q Consensus 154 ~p~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~l~~L~~L~Ls~N~---l~~~~~~~l~~l~~L~~L~L~~n~~~~~~ 226 (995)
++..+..+++|++|+|++|.+++..+ ..|..+++|++|+|++|. +++.+|..+..+.
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~---------------- 87 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLL---------------- 87 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHH----------------
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHH----------------
Confidence 44556666667777777776665433 335566777777777643 3334443332111
Q ss_pred CCcccCCCCcccEEECcCCCCCC----ccCccccCccccCccccccccccCCCCcc----ccCc---------CCCCeEe
Q 001922 227 IPREVGKLVNLVHLDLSSCELDG----QIPHEIGNLKLLDTVFLHINLLSGSIPKQ----LGNL---------TNLVNLD 289 (995)
Q Consensus 227 ~p~~~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~~p~~----l~~l---------~~L~~L~ 289 (995)
..+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+.. +..+ ++|++|+
T Consensus 88 --~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~ 165 (386)
T 2ca6_A 88 --QALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSII 165 (386)
T ss_dssp --HHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEE
T ss_pred --HHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEE
Confidence 223344556666666666654 24445555566666666666654332222 2222 6777777
Q ss_pred ccCCcCc-CcCC---ccccccCCCCEEEccCCcCCC-----CCCccccCCCCcceEEeccCccc----ccCCCcccCCCC
Q 001922 290 LSNNALT-GEIP---YSFINLRQLKLFNLFMNRLHG-----SIPDYLADLPNLETLGLWQNNFT----GVIPENLGQNGK 356 (995)
Q Consensus 290 Ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p~~~~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~ 356 (995)
|++|+++ +.++ ..+..+++|+.|++++|+|+. ..|..+..+++|+.|+|++|.++ +.+|..+..+++
T Consensus 166 L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~ 245 (386)
T 2ca6_A 166 CGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 245 (386)
T ss_dssp CCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTT
T ss_pred CCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCC
Confidence 7777776 2333 345566677777777777662 23335666777777777777775 455666677777
Q ss_pred CCeEEecCceeccc----CCCcC--cCCCccceeeccccccCC----CCCccc-ccCCCCcEEEecCCccCCCC
Q 001922 357 LQVLDLSSNKLTGT----IPTDL--CSSNQLRILILLKNFLFG----PIPERL-GACYSLTRVRLGQNYLNGSI 419 (995)
Q Consensus 357 L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~l~~N~l~~----~~p~~l-~~l~~L~~L~l~~N~l~~~~ 419 (995)
|++|+|++|++++. +|..+ +.+++|+.|+|++|.+.+ .+|..+ .++++|+.|++++|++++..
T Consensus 246 L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~ 319 (386)
T 2ca6_A 246 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEED 319 (386)
T ss_dssp CCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTS
T ss_pred cCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcch
Confidence 77777777777654 34444 336667777777777665 356655 45677777777777777554
No 341
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.5e-22 Score=213.90 Aligned_cols=196 Identities=16% Similarity=0.166 Sum_probs=84.5
Q ss_pred cccccccccccccccCCccccCCCCCceeeccCcc-ccccCCccccCCCCCceeeccC-CcccccCcccccchhhhhhhh
Q 001922 139 NLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNY-FFGKIPNSYGELQGLEYLSLAG-NDLTGKIPGELGNLTNLREIY 216 (995)
Q Consensus 139 ~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L~~L~ 216 (995)
+|++|++++|+|+++.+..|.++++|++|++++|. +++..+..|.++++|++|+|++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 34444444444444444444444444444444443 4433333444444444444444 444433333333333333333
Q ss_pred ccccccccCCCCcccCCCCccc---EEECcCC-CCCCccCccccCccccCccccccccccCCCCccccCcCCCC-eEecc
Q 001922 217 LGYYNVFEGGIPREVGKLVNLV---HLDLSSC-ELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLV-NLDLS 291 (995)
Q Consensus 217 L~~n~~~~~~~p~~~~~l~~L~---~L~Ls~n-~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~-~L~Ls 291 (995)
+++|.+.. +|. +..+++|+ +|++++| ++++..+.. |.++++|+ .|+++
T Consensus 112 l~~n~l~~--lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~------------------------~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 112 IFNTGLKM--FPD-LTKVYSTDIFFILEITDNPYMTSIPVNA------------------------FQGLCNETLTLKLY 164 (239)
T ss_dssp EEEECCCS--CCC-CTTCCBCCSEEEEEEESCTTCCEECTTT------------------------TTTTBSSEEEEECC
T ss_pred CCCCCCcc--ccc-cccccccccccEEECCCCcchhhcCccc------------------------ccchhcceeEEEcC
Confidence 33222211 222 23333333 5555555 554333333 44444444 44444
Q ss_pred CCcCcCcCCccccccCCCCEEEccCCc-CCCCCCccccCC-CCcceEEeccCcccccCCCcccCCCCCCeEEecCc
Q 001922 292 NNALTGEIPYSFINLRQLKLFNLFMNR-LHGSIPDYLADL-PNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSN 365 (995)
Q Consensus 292 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 365 (995)
+|.++...+..|.. ++|+.|++++|+ +++..+..|..+ ++|+.|++++|++++. |.. .+++|+.|+++++
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKELIARNT 236 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSEEECTTC
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCceeeccCc
Confidence 44444222223333 445555555552 443334444555 5555555555555532 221 3445555555543
No 342
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=7.3e-25 Score=249.51 Aligned_cols=255 Identities=21% Similarity=0.228 Sum_probs=177.0
Q ss_pred CCccccCCCCCCeEeccCCcccCcc------ccCcccccceeccccccccCCCcccccccccccccccccccccccCCcc
Q 001922 84 VPAQILRLDKLTNLSLAGNNFTGSI------EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVG 157 (995)
Q Consensus 84 ~~~~~~~l~~L~~L~L~~n~l~~~~------~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~ 157 (995)
++..+..+++|++|+|++|++++.. .+..+++|++|+|++|.+. ++++.+|..
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~---------------------~l~~~~~~~ 82 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTG---------------------RVKDEIPEA 82 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTT---------------------SCGGGSHHH
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccC---------------------ccccchhHH
Confidence 4444555555666666666555321 1445555555555554332 222333333
Q ss_pred -------ccCCCCCceeeccCccccc----cCCccccCCCCCceeeccCCcccccCcccccc-hhhhhhhhccccccccC
Q 001922 158 -------ILKLEKLKYLDLGGNYFFG----KIPNSYGELQGLEYLSLAGNDLTGKIPGELGN-LTNLREIYLGYYNVFEG 225 (995)
Q Consensus 158 -------~~~l~~L~~L~L~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~-l~~L~~L~L~~n~~~~~ 225 (995)
+..+++|++|+|++|.+++ .+|..+..+++|++|+|++|.+++..+..+.. +..+....+. +
T Consensus 83 ~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~------~ 156 (386)
T 2ca6_A 83 LRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKA------K 156 (386)
T ss_dssp HHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHH------H
T ss_pred HHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhc------c
Confidence 4678889999999998876 47778888889999999999887554444443 2222221111 0
Q ss_pred CCCcccCCCCcccEEECcCCCCC-CccC---ccccCccccCccccccccccC-----CCCccccCcCCCCeEeccCCcCc
Q 001922 226 GIPREVGKLVNLVHLDLSSCELD-GQIP---HEIGNLKLLDTVFLHINLLSG-----SIPKQLGNLTNLVNLDLSNNALT 296 (995)
Q Consensus 226 ~~p~~~~~l~~L~~L~Ls~n~l~-~~~~---~~~~~l~~L~~L~l~~N~l~~-----~~p~~l~~l~~L~~L~Ls~N~l~ 296 (995)
..++|++|+|++|+++ +.++ ..+..+++|++|++++|+++. ..+..+..+++|++|+|++|.++
T Consensus 157 -------~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~ 229 (386)
T 2ca6_A 157 -------NAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFT 229 (386)
T ss_dssp -------TCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCH
T ss_pred -------cCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCC
Confidence 1167888888888887 3334 356677888888888888872 34447888899999999999986
Q ss_pred ----CcCCccccccCCCCEEEccCCcCCCC----CCcccc--CCCCcceEEeccCcccc----cCCCcc-cCCCCCCeEE
Q 001922 297 ----GEIPYSFINLRQLKLFNLFMNRLHGS----IPDYLA--DLPNLETLGLWQNNFTG----VIPENL-GQNGKLQVLD 361 (995)
Q Consensus 297 ----~~~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~ 361 (995)
+.+|..+..+++|+.|+|++|+|++. ++..+. .+++|+.|+|++|++++ .+|..+ .++++|++|+
T Consensus 230 ~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~ 309 (386)
T 2ca6_A 230 HLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLE 309 (386)
T ss_dssp HHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEE
T ss_pred cHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEE
Confidence 56778888899999999999998865 456663 48999999999999997 477777 6689999999
Q ss_pred ecCceecccCC
Q 001922 362 LSSNKLTGTIP 372 (995)
Q Consensus 362 L~~N~l~~~~p 372 (995)
|++|++++..+
T Consensus 310 l~~N~l~~~~~ 320 (386)
T 2ca6_A 310 LNGNRFSEEDD 320 (386)
T ss_dssp CTTSBSCTTSH
T ss_pred ccCCcCCcchh
Confidence 99999986553
No 343
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.9e-22 Score=213.16 Aligned_cols=197 Identities=17% Similarity=0.208 Sum_probs=156.3
Q ss_pred CCceeeccCccccccCCccccCCCCCceeeccCCc-ccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEE
Q 001922 163 KLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGND-LTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLD 241 (995)
Q Consensus 163 ~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~ 241 (995)
+|++|+|++|++++..+..|+.+++|++|++++|+ +++..+.. |.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~-------------------------f~~l~~L~~L~ 86 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHS-------------------------FYNLSKVTHIE 86 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTT-------------------------EESCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhH-------------------------cCCCcCCcEEE
Confidence 67888888888876666677778888888888886 66444334 44455667777
Q ss_pred CcC-CCCCCccCccccCccccCccccccccccCCCCccccCcCCCC---eEeccCC-cCcCcCCccccccCCCC-EEEcc
Q 001922 242 LSS-CELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLV---NLDLSNN-ALTGEIPYSFINLRQLK-LFNLF 315 (995)
Q Consensus 242 Ls~-n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~L~L~ 315 (995)
+++ |++++..+..|..+++|++|++++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ .|+++
T Consensus 87 l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 87 IRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp EEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred CCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 776 77776666677778888888888888875 555 78888888 9999999 99988888899999999 99999
Q ss_pred CCcCCCCCCccccCCCCcceEEeccCc-ccccCCCcccCC-CCCCeEEecCceecccCCCcCcCCCccceeeccccc
Q 001922 316 MNRLHGSIPDYLADLPNLETLGLWQNN-FTGVIPENLGQN-GKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNF 390 (995)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l-~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 390 (995)
+|+++...+..|.. ++|+.|+|++|+ +++..+..|..+ ++|++|+|++|+++ .+|.. .+.+|+.|+++++.
T Consensus 165 ~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~-~l~~~--~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 165 NNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVT-ALPSK--GLEHLKELIARNTW 237 (239)
T ss_dssp SCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCC-CCCCT--TCTTCSEEECTTC-
T ss_pred CCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccc-cCChh--HhccCceeeccCcc
Confidence 99999444445555 899999999995 998888889999 99999999999999 45554 57788888887763
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.87 E-value=2.2e-22 Score=225.43 Aligned_cols=201 Identities=18% Similarity=0.123 Sum_probs=104.9
Q ss_pred ceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCC-Ccccc
Q 001922 58 CSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGG-LDWNY 134 (995)
Q Consensus 58 C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~-~~~~~ 134 (995)
|+|+.|.|+..++ + ++|..+ .+++++|+|++|+|+... .|.++++|++|+|++|++.+. .+..|
T Consensus 9 C~~~~v~C~~~~L----------t-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f 75 (350)
T 4ay9_X 9 CSNRVFLCQESKV----------T-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 75 (350)
T ss_dssp EETTEEEEESTTC----------C-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSB
T ss_pred eeCCEEEecCCCC----------C-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHh
Confidence 7888888875443 3 466654 246777777777776533 366666666666666666442 33455
Q ss_pred cccccccc-cccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccC-CcccccCcccccchhhh
Q 001922 135 SSLVNLEV-FDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAG-NDLTGKIPGELGNLTNL 212 (995)
Q Consensus 135 ~~l~~L~~-L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~-N~l~~~~~~~l~~l~~L 212 (995)
.++++|+. +.++.|+++.+.|..|..+++|++|++++|++++..+..+....++..|++.+ |+++...+
T Consensus 76 ~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~--------- 146 (350)
T 4ay9_X 76 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIER--------- 146 (350)
T ss_dssp CSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECT---------
T ss_pred hcchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccc---------
Confidence 55555443 33444555555555555555555555555555544444444444455555533 23332211
Q ss_pred hhhhccccccccCCCCcccCCC-CcccEEECcCCCCCCccCccccCccccCcccccc-ccccCCCCccccCcCCCCeEec
Q 001922 213 REIYLGYYNVFEGGIPREVGKL-VNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHI-NLLSGSIPKQLGNLTNLVNLDL 290 (995)
Q Consensus 213 ~~L~L~~n~~~~~~~p~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~-N~l~~~~p~~l~~l~~L~~L~L 290 (995)
..+..+ ..++.|+|++|+|+. ++.......+|+.|++.+ |.++.+.+++|.++++|++|||
T Consensus 147 ----------------~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 147 ----------------NSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDI 209 (350)
T ss_dssp ----------------TSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEEC
T ss_pred ----------------cchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhc
Confidence 122222 245666666666663 333333334455555542 3444333334455555555555
Q ss_pred cCCcCcC
Q 001922 291 SNNALTG 297 (995)
Q Consensus 291 s~N~l~~ 297 (995)
++|+|+.
T Consensus 210 s~N~l~~ 216 (350)
T 4ay9_X 210 SRTRIHS 216 (350)
T ss_dssp TTSCCCC
T ss_pred CCCCcCc
Confidence 5555553
No 345
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=4.1e-22 Score=218.83 Aligned_cols=214 Identities=25% Similarity=0.395 Sum_probs=146.4
Q ss_pred ccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceee
Q 001922 113 LSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLS 192 (995)
Q Consensus 113 l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~ 192 (995)
+..+..+.+..+.+++.. .+..+++|++|++++|.++.+ | .+..+++|++|+|++|.+++. +. +..+++|++|+
T Consensus 18 l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~l-~-~~~~l~~L~~L~L~~n~i~~~-~~-~~~l~~L~~L~ 91 (308)
T 1h6u_A 18 LANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTI-E-GVQYLNNLIGLELKDNQITDL-AP-LKNLTKITELE 91 (308)
T ss_dssp HHHHHHHHTTCSSTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCCSCCEEE
T ss_pred HHHHHHHHhCCCCcCcee--cHHHcCCcCEEEeeCCCccCc-h-hhhccCCCCEEEccCCcCCCC-hh-HccCCCCCEEE
Confidence 344445556666555432 244566666677766666653 3 466666666666666666533 32 66666666666
Q ss_pred ccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCcccccccccc
Q 001922 193 LAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLS 272 (995)
Q Consensus 193 Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~ 272 (995)
|++|++++. ..+..+++|++|++++|++++. + .+..+++|+.|++++|+++
T Consensus 92 L~~n~l~~~---------------------------~~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~ 142 (308)
T 1h6u_A 92 LSGNPLKNV---------------------------SAIAGLQSIKTLDLTSTQITDV-T-PLAGLSNLQVLYLDLNQIT 142 (308)
T ss_dssp CCSCCCSCC---------------------------GGGTTCTTCCEEECTTSCCCCC-G-GGTTCTTCCEEECCSSCCC
T ss_pred ccCCcCCCc---------------------------hhhcCCCCCCEEECCCCCCCCc-h-hhcCCCCCCEEECCCCccC
Confidence 666666531 1345567888888888888854 3 2778888888888888887
Q ss_pred CCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCccc
Q 001922 273 GSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLG 352 (995)
Q Consensus 273 ~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 352 (995)
+..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|++++..+ +..+++|+.|+|++|++++..+ +.
T Consensus 143 ~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~ 214 (308)
T 1h6u_A 143 NISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LA 214 (308)
T ss_dssp CCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GT
T ss_pred cCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--cc
Confidence 5433 7778888888888888875444 7778888888888888875443 7778888888888888875542 77
Q ss_pred CCCCCCeEEecCceecc
Q 001922 353 QNGKLQVLDLSSNKLTG 369 (995)
Q Consensus 353 ~l~~L~~L~L~~N~l~~ 369 (995)
.+++|++|+|++|++++
T Consensus 215 ~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 215 NTSNLFIVTLTNQTITN 231 (308)
T ss_dssp TCTTCCEEEEEEEEEEC
T ss_pred CCCCCCEEEccCCeeec
Confidence 77888888888888873
No 346
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.86 E-value=4.3e-22 Score=205.50 Aligned_cols=183 Identities=23% Similarity=0.246 Sum_probs=127.4
Q ss_pred CceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcccc
Q 001922 57 VCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDWNY 134 (995)
Q Consensus 57 ~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~~~ 134 (995)
.|.|.+|.|+...++ .+|..+ .++|++|+|++|++++.. .+.++++|++|+|++|+++++.+..|
T Consensus 6 ~C~~~~v~c~~~~l~-----------~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 72 (208)
T 2o6s_A 6 SCSGTTVECYSQGRT-----------SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF 72 (208)
T ss_dssp EEETTEEECCSSCCS-----------SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT
T ss_pred EECCCEEEecCCCcc-----------CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc
Confidence 489999999864433 234333 357888888888887644 36778888888888888887777777
Q ss_pred cccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhh
Q 001922 135 SSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLRE 214 (995)
Q Consensus 135 ~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~ 214 (995)
..+++|++|++++|+++++.+..|..+++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+.
T Consensus 73 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~------- 145 (208)
T 2o6s_A 73 NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD------- 145 (208)
T ss_dssp TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT-------
T ss_pred CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhc-------
Confidence 7778888888888888776666677777888888888877766666677777788888877777754443344
Q ss_pred hhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCC
Q 001922 215 IYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTN 284 (995)
Q Consensus 215 L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~ 284 (995)
.+++|++|++++|.+.+ .++.|+.|+++.|+++|.+|..++.++.
T Consensus 146 ------------------~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 146 ------------------RLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp ------------------TCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred ------------------cCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCccccC
Confidence 44555666666665543 2345666666666666666666665544
No 347
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=4.9e-21 Score=203.80 Aligned_cols=180 Identities=22% Similarity=0.175 Sum_probs=127.7
Q ss_pred cccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEcc
Q 001922 236 NLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLF 315 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~ 315 (995)
+.++++++++.++ .+|..+. +.++.|++++|.+++..+..|.++++|++|+|++|.|++..+..|.++++|+.|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 4566777777776 4454443 466777777777776666677777777777777777777666677777777777777
Q ss_pred CCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC
Q 001922 316 MNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI 395 (995)
Q Consensus 316 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 395 (995)
+|++++..+..|..+++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|++.+..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 77777666666777777777777777777666666677777777777777777555556677777777777777777666
Q ss_pred CcccccCCCCcEEEecCCccCCC
Q 001922 396 PERLGACYSLTRVRLGQNYLNGS 418 (995)
Q Consensus 396 p~~l~~l~~L~~L~l~~N~l~~~ 418 (995)
+..+..+++|+.|++++|++.+.
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTT
T ss_pred HHHHhCCCCCCEEEeeCCceeCC
Confidence 66677777777777777777654
No 348
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.86 E-value=2.9e-21 Score=216.26 Aligned_cols=122 Identities=20% Similarity=0.184 Sum_probs=78.1
Q ss_pred CccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCC-ccccCCCCcce-EEec
Q 001922 262 DTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIP-DYLADLPNLET-LGLW 339 (995)
Q Consensus 262 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 339 (995)
++++.++++++ .+|..+ .+++++|+|++|+|+.+.+.+|.++++|+.|+|++|++.+.+| .+|.+++++.+ +.++
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 45667777777 455544 2467777777777775555667777777777777777655444 45667766654 5555
Q ss_pred cCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeec
Q 001922 340 QNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILIL 386 (995)
Q Consensus 340 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 386 (995)
+|+++...|..|..+++|++|++++|++++..+..+....++..|++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l 135 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 135 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhh
Confidence 67777666777777777777777777776544444444444444444
No 349
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.85 E-value=1.6e-21 Score=210.48 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=116.0
Q ss_pred ccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCC-----------------ChhHHHHHHHHHHhccCCCCceeEeE
Q 001922 688 VKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTH-----------------SHDHGFRAEIQTLGNIRHRNIVRLLA 750 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~~E~~~l~~l~hpniv~~~~ 750 (995)
|+.++.||+|+||.||+|++.+|+.||+|.+...... .....+.+|++++++++ | +++.+
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 5566899999999999998877999999998532211 12456889999999999 4 66666
Q ss_pred EEecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEe
Q 001922 751 FCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVA 830 (995)
Q Consensus 751 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~ 830 (995)
++.. +..|+||||++||+|.+ +.. .....++.|++.||.|||+.+ |+||||||+|||++ ++.+||+
T Consensus 169 ~~~~-~~~~lvmE~~~g~~L~~-l~~--------~~~~~i~~qi~~~l~~lH~~g---iiHrDlkp~NILl~-~~~vkl~ 234 (282)
T 1zar_A 169 VYAW-EGNAVLMELIDAKELYR-VRV--------ENPDEVLDMILEEVAKFYHRG---IVHGDLSQYNVLVS-EEGIWII 234 (282)
T ss_dssp EEEE-ETTEEEEECCCCEEGGG-CCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEE-TTEEEEC
T ss_pred EEec-cceEEEEEecCCCcHHH-cch--------hhHHHHHHHHHHHHHHHHHCC---CEeCCCCHHHEEEE-CCcEEEE
Confidence 5543 56799999999999999 531 123469999999999999887 99999999999999 9999999
Q ss_pred eeccccccccCCCCccccccccCccccccccccc
Q 001922 831 DFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYT 864 (995)
Q Consensus 831 DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~ 864 (995)
|||+|+. +..|+|||++..
T Consensus 235 DFG~a~~---------------~~~~~a~e~l~r 253 (282)
T 1zar_A 235 DFPQSVE---------------VGEEGWREILER 253 (282)
T ss_dssp CCTTCEE---------------TTSTTHHHHHHH
T ss_pred ECCCCeE---------------CCCCCHHHHHHH
Confidence 9999864 235788998753
No 350
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=3.8e-22 Score=234.80 Aligned_cols=211 Identities=25% Similarity=0.313 Sum_probs=155.3
Q ss_pred CCCCCCCCCCCCCc-----eeeeE-EeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCccccCcccccce
Q 001922 45 ALISWNSSNPSSVC-----SWAGI-CCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSIEIGNLSSLQF 118 (995)
Q Consensus 45 ~l~~W~~~~~~~~C-----~w~gv-~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~ 118 (995)
.+.+|..+ .+.| .|.|+ .|...+++.|+|+++++++ +|..+. ++|++|+|++|+|+... ..+++|++
T Consensus 32 ~l~~W~~~--~~~~~~~~~~~~~l~~C~~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~~ip--~~l~~L~~ 104 (571)
T 3cvr_A 32 AWDKWEKQ--ALPGENRNEAVSLLKECLINQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALISLP--ELPASLEY 104 (571)
T ss_dssp HHHHHHTT--CCTTCCHHHHHHHHHHHHHTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCSCCC--CCCTTCCE
T ss_pred HHHHHhcc--CCccccccchhhhccccccCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCcccc--cccCCCCE
Confidence 45667543 2356 79999 7988899999999999987 787663 78999999999988533 66788888
Q ss_pred eccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcc
Q 001922 119 LNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDL 198 (995)
Q Consensus 119 L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l 198 (995)
|+|++|+|++++ . +.. +|++|+|++|+|++ +|. .+++|++|+|++|.|++ +|. .+++|++|+|++|+|
T Consensus 105 L~Ls~N~l~~ip-~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L 172 (571)
T 3cvr_A 105 LDACDNRLSTLP-E-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQL 172 (571)
T ss_dssp EECCSSCCSCCC-C-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCC
T ss_pred EEccCCCCCCcc-h-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCC
Confidence 888888888743 3 544 77778888877777 444 56777777777777764 554 456777777777777
Q ss_pred cccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCcccc-------Cccccccccc
Q 001922 199 TGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLL-------DTVFLHINLL 271 (995)
Q Consensus 199 ~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-------~~L~l~~N~l 271 (995)
++ +|. | . ++|++|+|++|+|+ .+|. +.. +| +.|+|++|+|
T Consensus 173 ~~-lp~-l-------------------------~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 173 TF-LPE-L-------------------------P--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRI 219 (571)
T ss_dssp SC-CCC-C-------------------------C--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCC
T ss_pred CC-cch-h-------------------------h--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcc
Confidence 74 333 2 2 46777777777777 4454 443 55 8888888888
Q ss_pred cCCCCccccCcCCCCeEeccCCcCcCcCCccccccCC
Q 001922 272 SGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQ 308 (995)
Q Consensus 272 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 308 (995)
+ .+|..+..+++|+.|+|++|.|++.+|..|..++.
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 8 57777888999999999999999888888877654
No 351
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.84 E-value=2.1e-20 Score=198.83 Aligned_cols=179 Identities=23% Similarity=0.206 Sum_probs=143.4
Q ss_pred cccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEe
Q 001922 259 KLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGL 338 (995)
Q Consensus 259 ~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 338 (995)
...+.++++++.++ .+|..+. ++|+.|+|++|.+++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 90 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGL 90 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEEC
Confidence 35677888888888 4665554 58899999999998888888888999999999999998888888888899999999
Q ss_pred ccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCC
Q 001922 339 WQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGS 418 (995)
Q Consensus 339 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~ 418 (995)
++|++++..+..|..+++|++|+|++|+|++..+..|..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++++.
T Consensus 91 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 170 (251)
T 3m19_A 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSV 170 (251)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCcc
Confidence 99999877778888888999999999988866666678888888888888888877777788888888888888888877
Q ss_pred CCCCcccCCCCceeeccCcccc
Q 001922 419 IPDGFIYLPGLNLAELQSNYLS 440 (995)
Q Consensus 419 ~p~~~~~l~~L~~l~l~~n~l~ 440 (995)
.+..|..+++|+.+++++|.+.
T Consensus 171 ~~~~~~~l~~L~~L~l~~N~~~ 192 (251)
T 3m19_A 171 PHGAFDRLGKLQTITLFGNQFD 192 (251)
T ss_dssp CTTTTTTCTTCCEEECCSCCBC
T ss_pred CHHHHhCCCCCCEEEeeCCcee
Confidence 7666666655555555555443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=9.2e-21 Score=223.06 Aligned_cols=189 Identities=28% Similarity=0.414 Sum_probs=134.2
Q ss_pred CcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEec
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLG 411 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 411 (995)
+|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|++++|.+.+ +|. +.. +|+.|+++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls 128 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVD 128 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECC
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECC
Confidence 78889999988886 666553 67888888888888 566 345677777777777766 555 444 66677777
Q ss_pred CCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCccc
Q 001922 412 QNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFS 491 (995)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 491 (995)
+|+|++ +|. .+++|+.|+|++|+|++ +|. .+++|+.|+|++|+|+
T Consensus 129 ~N~l~~-lp~------------------------------~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~ 173 (571)
T 3cvr_A 129 NNQLTM-LPE------------------------------LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLT 173 (571)
T ss_dssp SSCCSC-CCC------------------------------CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCS
T ss_pred CCcCCC-CCC------------------------------cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCC
Confidence 666664 332 13456777777777774 554 4567778888888877
Q ss_pred CCCCCCccchhhhccccccccccCCCCCCccCccccc-------ceeeccCCcccCCCccccccccccCeEecccccccc
Q 001922 492 GPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHL-------TYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQ 564 (995)
Q Consensus 492 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~ 564 (995)
+ +|. |. ++|+.|+|++|+|+ .+|. +.. +| +.|+|++|+|+ .+|..+..+++|+.|+|++|+|++
T Consensus 174 ~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 174 F-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp C-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred C-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 5 665 55 77788888888887 5666 554 66 88888888887 678878788888888888888888
Q ss_pred ccCcccccCCc
Q 001922 565 NIPKSIGSMKS 575 (995)
Q Consensus 565 ~~p~~~~~l~~ 575 (995)
.+|..+..++.
T Consensus 245 ~~p~~l~~l~~ 255 (571)
T 3cvr_A 245 RIRESLSQQTA 255 (571)
T ss_dssp HHHHHHHHHHH
T ss_pred cCHHHHHHhhc
Confidence 88877776544
No 353
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.82 E-value=1.7e-21 Score=238.17 Aligned_cols=274 Identities=18% Similarity=0.160 Sum_probs=122.9
Q ss_pred ccchHHHHHHHHHhCCC-CCCCCCCCCCCCCCCCceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCc
Q 001922 25 LVNDFHVLVALKQGFEN-PEPALISWNSSNPSSVCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNN 103 (995)
Q Consensus 25 ~~~~~~~Ll~~k~~~~~-~~~~l~~W~~~~~~~~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~ 103 (995)
...++++|+++..+... ....-..|... ++..+.|.++.++..+++.++|.++++.. ++. ..++.++|+.|.
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~l~L~~n~~~~-~~~-----~~l~~l~Ls~~~ 202 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGD-STPSGTATNSAVSTPLTPKIELFANGKDE-ANQ-----ALLQHKKLSQYS 202 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCC-CCccccCCCceecCCccceEEeeCCCCCc-chh-----hHhhcCccCccc
Confidence 45689999999877642 22234467543 34578899999999999999999888775 233 235566677766
Q ss_pred ccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCcccc
Q 001922 104 FTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYG 183 (995)
Q Consensus 104 l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 183 (995)
|. .++++.|.+. .++..|..+++|+.|+|++|.+.. +|..+..+++|++|+|++|.|+ .+|..|+
T Consensus 203 i~------------~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 267 (727)
T 4b8c_D 203 ID------------EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN-ISANIFKYDFLTRLYLNGNSLT-ELPAEIK 267 (727)
T ss_dssp --------------------------------CCCCCCEEECTTSCCSC-CCGGGGGCCSCSCCBCTTSCCS-CCCGGGG
T ss_pred cc------------Ccccccccee-cChhhhccCCCCcEEECCCCCCCC-CChhhcCCCCCCEEEeeCCcCc-ccChhhh
Confidence 54 3455566665 566777788888888888888875 5666668888888888888887 7788888
Q ss_pred CCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccc-cC
Q 001922 184 ELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKL-LD 262 (995)
Q Consensus 184 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~-L~ 262 (995)
.+++|++|+|++|+|+ .+|..|+++++|++|+|++|.+. .+|..|+.+++|++|+|++|.|++.+|..+..+.. +.
T Consensus 268 ~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~--~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~ 344 (727)
T 4b8c_D 268 NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT--TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGL 344 (727)
T ss_dssp GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC--CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHH
T ss_pred CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC--ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhh
Confidence 8888888888888888 66888888888888888876653 47777888888888888888888888877765532 23
Q ss_pred ccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCc
Q 001922 263 TVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNN 342 (995)
Q Consensus 263 ~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 342 (995)
.++|++|.+++.+|. .|+.|++++|... -..+ +.|.+..+..+..+..+....+++|-
T Consensus 345 ~l~l~~N~l~~~~p~------~l~~l~l~~n~~~---~~~~-------------~~l~~~~~~~~~~l~~~~~~~ls~Ni 402 (727)
T 4b8c_D 345 IFYLRDNRPEIPLPH------ERRFIEINTDGEP---QREY-------------DSLQQSTEHLATDLAKRTFTVLSYNT 402 (727)
T ss_dssp HHHHHHCCCCCCCCC------C---------------------------------------------------------C
T ss_pred HHhhccCcccCcCcc------ccceeEeeccccc---cccc-------------CCccccccchhhcccccceeeeeccc
Confidence 467788888777665 3555666666110 0111 12222333444555566666777776
Q ss_pred ccc
Q 001922 343 FTG 345 (995)
Q Consensus 343 l~~ 345 (995)
+.+
T Consensus 403 l~~ 405 (727)
T 4b8c_D 403 LCQ 405 (727)
T ss_dssp CCG
T ss_pred ccc
Confidence 653
No 354
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.82 E-value=7.8e-20 Score=188.49 Aligned_cols=163 Identities=25% Similarity=0.229 Sum_probs=123.6
Q ss_pred CcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEc
Q 001922 235 VNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNL 314 (995)
Q Consensus 235 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 314 (995)
++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|.+++..+..|.++++|+.|++
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 107 (208)
T 2o6s_A 28 AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELAL 107 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEc
Confidence 46778888888887666666777888888888888887666666777888888888888888766667778888888888
Q ss_pred cCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCC
Q 001922 315 FMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGP 394 (995)
Q Consensus 315 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~ 394 (995)
++|+|++..+..|..+++|++|++++|++++..+..+..+++|++|+|++|.+.+ .+++|+.|+++.|.+.|.
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ 180 (208)
T 2o6s_A 108 NTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGV 180 (208)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTT
T ss_pred CCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCce
Confidence 8888887666667778888888888888887666667778888888888887663 344677777777777777
Q ss_pred CCcccccCCC
Q 001922 395 IPERLGACYS 404 (995)
Q Consensus 395 ~p~~l~~l~~ 404 (995)
+|..++.+..
T Consensus 181 ip~~~~~l~~ 190 (208)
T 2o6s_A 181 VRNSAGSVAP 190 (208)
T ss_dssp BBCTTSSBCT
T ss_pred eeccCccccC
Confidence 7777665543
No 355
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=6.7e-20 Score=218.33 Aligned_cols=189 Identities=25% Similarity=0.316 Sum_probs=93.6
Q ss_pred CCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCc
Q 001922 93 KLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGN 172 (995)
Q Consensus 93 ~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 172 (995)
.+..++++.+.+++...+..|++|+.|+|++|.|..+. .+..+++|+.|+|++|+|+++.| +..+++|++|+|++|
T Consensus 22 ~l~~l~l~~~~i~~~~~~~~L~~L~~L~l~~n~i~~l~--~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHHHHHTTCSCTTSEECHHHHTTCCCCBCTTCCCCCCT--TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSS
T ss_pred HHHHHhccCCCcccccchhcCCCCCEEECcCCCCCCCh--HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCC
Confidence 34445555555555555556666666666666665432 35555555555555555555433 555555555555555
Q ss_pred cccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccC
Q 001922 173 YFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIP 252 (995)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 252 (995)
.+++ +| .+..+++|++|+|++|++++. . .+..+++|+.|+|++|.+++.
T Consensus 98 ~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l--~-------------------------~l~~l~~L~~L~Ls~N~l~~l-- 146 (605)
T 1m9s_A 98 KIKD-LS-SLKDLKKLKSLSLEHNGISDI--N-------------------------GLVHLPQLESLYLGNNKITDI-- 146 (605)
T ss_dssp CCCC-CT-TSTTCTTCCEEECTTSCCCCC--G-------------------------GGGGCTTCSEEECCSSCCCCC--
T ss_pred CCCC-Ch-hhccCCCCCEEEecCCCCCCC--c-------------------------cccCCCccCEEECCCCccCCc--
Confidence 5542 22 455555555555555555521 1 122334455555555555432
Q ss_pred ccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC
Q 001922 253 HEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH 320 (995)
Q Consensus 253 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 320 (995)
..+..+++|+.|+|++|++++..| +..+++|+.|+|++|.|++. ..+..+++|+.|+|++|++.
T Consensus 147 ~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 147 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEE
T ss_pred hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCc
Confidence 334444444444444444443332 44444444444444444432 13444444444444444444
No 356
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=8.2e-20 Score=189.78 Aligned_cols=138 Identities=16% Similarity=0.148 Sum_probs=124.9
Q ss_pred CCCcEEEcCCCcccccCC-ccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceee
Q 001922 454 DRLGQLNLSNNLLSGPLP-FSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLD 532 (995)
Q Consensus 454 ~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 532 (995)
..+++|+|++|+|++..| ..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..|..|+.+++|++|+
T Consensus 32 ~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 111 (220)
T 2v70_A 32 QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLM 111 (220)
T ss_dssp TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEE
T ss_pred CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEE
Confidence 346789999999997655 4588999999999999999988888999999999999999999987777899999999999
Q ss_pred ccCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 533 MSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 533 Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
|++|+|++..|..|..+++|++|+|++|+|++..|..+..+++|+.|++++|++.+..+
T Consensus 112 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 112 LRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 99999998889999999999999999999999889999999999999999999987655
No 357
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=1.2e-19 Score=216.28 Aligned_cols=193 Identities=23% Similarity=0.334 Sum_probs=109.8
Q ss_pred cccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCcee
Q 001922 112 NLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYL 191 (995)
Q Consensus 112 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 191 (995)
.+..+..++|+.+.+.+..+ +..+++|+.|++++|.|..+ | .+..+++|++|+|++|++++..| +..+++|++|
T Consensus 19 ~l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L 92 (605)
T 1m9s_A 19 AFAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWL 92 (605)
T ss_dssp HHHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEE
T ss_pred HHHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEE
Confidence 45556666666666664432 44566666666666666553 2 45666666666666666654333 5566666666
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLL 271 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l 271 (995)
+|++|++++ + ..+..+++|++|+|++|.+++. ..+..+++|+.|+|++|++
T Consensus 93 ~Ls~N~l~~--------------------------l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l 143 (605)
T 1m9s_A 93 FLDENKIKD--------------------------L-SSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKI 143 (605)
T ss_dssp ECCSSCCCC--------------------------C-TTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCC
T ss_pred ECcCCCCCC--------------------------C-hhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCcc
Confidence 666666552 1 1345566777777777777642 3355566666666666666
Q ss_pred cCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccc
Q 001922 272 SGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTG 345 (995)
Q Consensus 272 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 345 (995)
++. ..+..+++|+.|+|++|.|++..| +..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 144 ~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 144 TDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp CCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred CCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 543 345555556666666555554444 55555555555555555532 234555555555555555543
No 358
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=8.8e-20 Score=198.34 Aligned_cols=190 Identities=25% Similarity=0.315 Sum_probs=125.2
Q ss_pred CCCeEeccCCcccCccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCc
Q 001922 93 KLTNLSLAGNNFTGSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGN 172 (995)
Q Consensus 93 ~L~~L~L~~n~l~~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 172 (995)
++..+.+..+.+++...+..+++|++|++++|.++... .+..+++|++|++++|+++++.+ +..+++|++|+|++|
T Consensus 25 ~~~~~~l~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~--~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 25 ETIKDNLKKKSVTDAVTQNELNSIDQIIANNSDIKSVQ--GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHHTTCSCTTSEECHHHHHTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHHHhcCCCcccccchhhcCcccEEEccCCCcccCh--hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 34445566666666556667777777777777776552 36667777777777777776543 677777777777777
Q ss_pred cccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccC
Q 001922 173 YFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIP 252 (995)
Q Consensus 173 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 252 (995)
.+++ +| .+..+++|++|+|++|++++. .. +..+++|++|++++|++++.
T Consensus 101 ~l~~-~~-~l~~l~~L~~L~L~~n~i~~~--~~-------------------------l~~l~~L~~L~l~~n~l~~~-- 149 (291)
T 1h6t_A 101 KVKD-LS-SLKDLKKLKSLSLEHNGISDI--NG-------------------------LVHLPQLESLYLGNNKITDI-- 149 (291)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCCCC--GG-------------------------GGGCTTCCEEECCSSCCCCC--
T ss_pred cCCC-Ch-hhccCCCCCEEECCCCcCCCC--hh-------------------------hcCCCCCCEEEccCCcCCcc--
Confidence 7764 33 367777777777777777642 12 33445666666666666643
Q ss_pred ccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCC
Q 001922 253 HEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHG 321 (995)
Q Consensus 253 ~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 321 (995)
..+..+++|+.|++++|++++..+ +..+++|+.|++++|.|++. + .+..+++|+.|++++|++..
T Consensus 150 ~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 150 TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GGTTCTTCSEEEEEEEEEEC
T ss_pred hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hhccCCCCCEEECcCCcccC
Confidence 456666677777777777765433 67777777777777777743 3 36777777777777777764
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.79 E-value=2.7e-19 Score=187.21 Aligned_cols=156 Identities=29% Similarity=0.289 Sum_probs=111.1
Q ss_pred CCCceeeeEEeCCCceeeeecCCCCccccCCccccCCCCCCeEeccCCcccCcc--ccCcccccceeccccccccCCCcc
Q 001922 55 SSVCSWAGICCSRDRVASLDLTDLNLCGSVPAQILRLDKLTNLSLAGNNFTGSI--EIGNLSSLQFLNISNNQFSGGLDW 132 (995)
Q Consensus 55 ~~~C~w~gv~C~~~~v~~l~l~~~~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~--~~~~l~~L~~L~Ls~N~i~~~~~~ 132 (995)
.+.|+|.+|.|+..+++ .+|..+. ++|++|+|++|+|++.. .+.++++|++|+|++|+|+.+.+.
T Consensus 16 ~~~Cs~~~v~c~~~~l~-----------~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~ 82 (229)
T 3e6j_A 16 QCSCSGTTVDCRSKRHA-----------SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVG 82 (229)
T ss_dssp TCEEETTEEECTTSCCS-----------SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTT
T ss_pred CCEEeCCEeEccCCCcC-----------ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChh
Confidence 45799999999864432 4555443 67888888888887753 477778888888888888777767
Q ss_pred cccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhh
Q 001922 133 NYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNL 212 (995)
Q Consensus 133 ~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L 212 (995)
.|..+++|++|+|++|+|+++.+..|..+++|++|+|++|+|+ .+|..+..+++|++|+|++|+|++..+..
T Consensus 83 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~------- 154 (229)
T 3e6j_A 83 VFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGA------- 154 (229)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTT-------
T ss_pred hcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHH-------
Confidence 7777777777777777777766666777777777777777776 66777777777777777777777443333
Q ss_pred hhhhccccccccCCCCcccCCCCcccEEECcCCCCCC
Q 001922 213 REIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDG 249 (995)
Q Consensus 213 ~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~ 249 (995)
+..+++|++|+|++|.+..
T Consensus 155 ------------------~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 155 ------------------FDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp ------------------TTTCTTCCEEECTTSCBCT
T ss_pred ------------------HhCCCCCCEEEeeCCCccC
Confidence 4445666777777777664
No 360
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=5e-21 Score=226.72 Aligned_cols=186 Identities=20% Similarity=0.150 Sum_probs=96.2
Q ss_pred CCCCCceeeccCccccccCCccccCCCCCceeeccCCc-------------ccccCcccccchhhhhhhh-ccccccccC
Q 001922 160 KLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGND-------------LTGKIPGELGNLTNLREIY-LGYYNVFEG 225 (995)
Q Consensus 160 ~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-------------l~~~~~~~l~~l~~L~~L~-L~~n~~~~~ 225 (995)
.+++|+.|+|++|+++ .+|..++.+++|+.|++++|. +.+.+|..++++++|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~--- 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL--- 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH---
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc---
Confidence 3445555555555553 445555555555555554443 4456666677777777776 443221
Q ss_pred CCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccc
Q 001922 226 GIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFIN 305 (995)
Q Consensus 226 ~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 305 (995)
.+|..+.+++|.++...+ ..|+.|+|++|.+++ +|. ++.+++|+.|+|++|.|+ .+|..|++
T Consensus 423 ---------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 484 (567)
T 1dce_A 423 ---------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAA 484 (567)
T ss_dssp ---------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGG
T ss_pred ---------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhc
Confidence 234444444444442211 124455555555553 333 555555555555555555 44555555
Q ss_pred cCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccC-CCcccCCCCCCeEEecCceecc
Q 001922 306 LRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVI-PENLGQNGKLQVLDLSSNKLTG 369 (995)
Q Consensus 306 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~ 369 (995)
+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+|++.. |..++.+++|+.|+|++|++++
T Consensus 485 l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 485 LRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred CCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 5555555555555553 34 4555555555555555555444 5555555555555555555553
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=1.6e-19 Score=196.20 Aligned_cols=192 Identities=24% Similarity=0.310 Sum_probs=102.3
Q ss_pred cccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCcee
Q 001922 112 NLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYL 191 (995)
Q Consensus 112 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 191 (995)
.+..+..+++..+.+++.. .+..+++|++|++++|.++.+ + .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 22 ~l~~~~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L 95 (291)
T 1h6t_A 22 AFAETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWL 95 (291)
T ss_dssp HHHHHHHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEE
Confidence 3444555556665555432 234455555666665555553 2 25555555555555555553322 5555555555
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLL 271 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l 271 (995)
+|++|++++. ..+..+++|++|++++|++++. ..
T Consensus 96 ~l~~n~l~~~---------------------------~~l~~l~~L~~L~L~~n~i~~~--~~----------------- 129 (291)
T 1h6t_A 96 FLDENKVKDL---------------------------SSLKDLKKLKSLSLEHNGISDI--NG----------------- 129 (291)
T ss_dssp ECCSSCCCCG---------------------------GGGTTCTTCCEEECTTSCCCCC--GG-----------------
T ss_pred ECCCCcCCCC---------------------------hhhccCCCCCEEECCCCcCCCC--hh-----------------
Confidence 5555555421 1134455666666666666532 23
Q ss_pred cCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcc
Q 001922 272 SGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENL 351 (995)
Q Consensus 272 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 351 (995)
+..+++|+.|++++|++++. ..+..+++|+.|++++|++++..+ +..+++|+.|++++|++++. + .+
T Consensus 130 -------l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~l-~-~l 196 (291)
T 1h6t_A 130 -------LVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL-R-AL 196 (291)
T ss_dssp -------GGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-G-GG
T ss_pred -------hcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCCC-h-hh
Confidence 44445555555555555533 345555555555555555554333 55556666666666666542 2 25
Q ss_pred cCCCCCCeEEecCceec
Q 001922 352 GQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 352 ~~l~~L~~L~L~~N~l~ 368 (995)
..+++|+.|++++|+++
T Consensus 197 ~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 197 AGLKNLDVLELFSQECL 213 (291)
T ss_dssp TTCTTCSEEEEEEEEEE
T ss_pred ccCCCCCEEECcCCccc
Confidence 56666666666666665
No 362
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.4e-20 Score=222.92 Aligned_cols=202 Identities=21% Similarity=0.188 Sum_probs=156.5
Q ss_pred cccccccccccccccccCCccccCCCCCceeeccCcc-------------ccccCCccccCCCCCceee-ccCCcccccC
Q 001922 137 LVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNY-------------FFGKIPNSYGELQGLEYLS-LAGNDLTGKI 202 (995)
Q Consensus 137 l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~p~~l~~l~~L~~L~-Ls~N~l~~~~ 202 (995)
+++|+.|+|++|+++. +|..++.|++|+.|++++|. +.+.+|..++.+++|+.|+ ++.|.+
T Consensus 348 ~~~L~~L~Ls~n~L~~-Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~---- 422 (567)
T 1dce_A 348 DEQLFRCELSVEKSTV-LQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL---- 422 (567)
T ss_dssp TTTSSSCCCCHHHHHH-HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH----
T ss_pred CccceeccCChhhHHh-hHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc----
Confidence 3444444444444443 34444444455555544443 5567888899999999998 676644
Q ss_pred cccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCc
Q 001922 203 PGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNL 282 (995)
Q Consensus 203 ~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l 282 (995)
.+|+.++++.|.+.. +|. ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..++++
T Consensus 423 -------~~L~~l~l~~n~i~~--l~~-----~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 485 (567)
T 1dce_A 423 -------DDLRSKFLLENSVLK--MEY-----ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAAL 485 (567)
T ss_dssp -------HHHHHHHHHHHHHHH--HHH-----TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGC
T ss_pred -------chhhhhhhhcccccc--cCc-----cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcC
Confidence 467777887665543 221 258999999999996 566 999999999999999999 789999999
Q ss_pred CCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCC-CccccCCCCcceEEeccCcccccCCCc---ccCCCCCC
Q 001922 283 TNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSI-PDYLADLPNLETLGLWQNNFTGVIPEN---LGQNGKLQ 358 (995)
Q Consensus 283 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~ 358 (995)
++|+.|+|++|.|++ +| .|.++++|+.|+|++|+|++.. |..+..+++|+.|+|++|++++.+|.. +..+++|+
T Consensus 486 ~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~ 563 (567)
T 1dce_A 486 RCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 563 (567)
T ss_dssp TTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCS
T ss_pred CCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccC
Confidence 999999999999996 56 8999999999999999999887 999999999999999999999765532 23478899
Q ss_pred eEEe
Q 001922 359 VLDL 362 (995)
Q Consensus 359 ~L~L 362 (995)
.|++
T Consensus 564 ~L~l 567 (567)
T 1dce_A 564 SILT 567 (567)
T ss_dssp EEEC
T ss_pred ccCC
Confidence 8875
No 363
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=3e-18 Score=179.21 Aligned_cols=137 Identities=25% Similarity=0.232 Sum_probs=122.7
Q ss_pred CCCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeec
Q 001922 454 DRLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDM 533 (995)
Q Consensus 454 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 533 (995)
++|++|+|++|++++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|+|++..+..|..+++|++|+|
T Consensus 40 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L 119 (229)
T 3e6j_A 40 TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFM 119 (229)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEec
Confidence 57889999999999888889999999999999999998666677899999999999999999766777899999999999
Q ss_pred cCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 534 SQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 534 s~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
++|+|+ .+|..+..+++|++|+|++|+|++..+..+..+++|+.|++++|++.+..+
T Consensus 120 s~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 120 CCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp CSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 999998 789999999999999999999988777788999999999999999987655
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=3.6e-18 Score=177.31 Aligned_cols=109 Identities=25% Similarity=0.306 Sum_probs=44.3
Q ss_pred ccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEec
Q 001922 260 LLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLW 339 (995)
Q Consensus 260 ~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 339 (995)
.|+.|++++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|..+++|++|+|+
T Consensus 33 ~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 33 TITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp TCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECC
Confidence 33444444444443333334444444444444444443334444444444444444444443333333344444444444
Q ss_pred cCcccccCCCcccCCCCCCeEEecCceec
Q 001922 340 QNNFTGVIPENLGQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 340 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 368 (995)
+|++++..|..|..+++|++|+|++|+|+
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 141 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKLQ 141 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcCC
Confidence 44444333333444444444444444443
No 365
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=4.3e-18 Score=176.78 Aligned_cols=150 Identities=25% Similarity=0.257 Sum_probs=71.2
Q ss_pred EEECcCCCCCCccCccccCccccCccccccccccCCCC-ccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCC
Q 001922 239 HLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIP-KQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMN 317 (995)
Q Consensus 239 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 317 (995)
.+++++|.++ .+|..+. +.++.|++++|++++..+ ..|..+++|++|+|++|.|++..+..|.++++|+.|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 4555555555 2333332 223445555555544322 23444555555555555555444444555555555555555
Q ss_pred cCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeecccccc
Q 001922 318 RLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFL 391 (995)
Q Consensus 318 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l 391 (995)
+|++..+..|..+++|++|+|++|++++..|..|..+++|++|+|++|+|++..|..|..+++|+.|++++|.+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 165 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPF 165 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCC
Confidence 55544444455555555555555555544444455555555555555555444444444444444444444433
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.75 E-value=5.3e-18 Score=176.08 Aligned_cols=152 Identities=22% Similarity=0.235 Sum_probs=118.3
Q ss_pred ccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCc
Q 001922 263 TVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNN 342 (995)
Q Consensus 263 ~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 342 (995)
.+++++|.++ .+|..+. ++|+.|+|++|.|++..+..|.++++|+.|+|++|+|++..|..|..+++|++|+|++|+
T Consensus 15 ~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~ 91 (220)
T 2v9t_B 15 IVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNK 91 (220)
T ss_dssp EEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSC
T ss_pred EEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCc
Confidence 4555555555 3454443 578888888888887777788888888888888888887778888888888888888888
Q ss_pred ccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCC
Q 001922 343 FTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNG 417 (995)
Q Consensus 343 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~ 417 (995)
|+...+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|.+.+..+..+..+++|+.|++++|++..
T Consensus 92 l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 92 ITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 886666667888888888888888887777778778888888888888777777777777777777777777753
No 367
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.75 E-value=2.1e-18 Score=193.85 Aligned_cols=176 Identities=26% Similarity=0.189 Sum_probs=109.7
Q ss_pred cEEECcCCCCCCccCccccCccccCccccccccccCCCCcccc-CcCCCCeEeccCCcCcCcCCccccccCCCCEEEccC
Q 001922 238 VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLG-NLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFM 316 (995)
Q Consensus 238 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 316 (995)
+.+++++++++ .+|..+. +.++.|+|++|+|++..+..+. ++++|++|+|++|+|++..+..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 46777777776 3454443 3466677777777666666665 677777777777777766666677777777777777
Q ss_pred CcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcC---cCCCccceeeccccccCC
Q 001922 317 NRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDL---CSSNQLRILILLKNFLFG 393 (995)
Q Consensus 317 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~l~~N~l~~ 393 (995)
|+|++..+..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..+..| ..+++|+.|+|++|++.+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 77776556666777777777777777776666677777777777777777764222223 345555555555555554
Q ss_pred CCCcccccCCC--CcEEEecCCccC
Q 001922 394 PIPERLGACYS--LTRVRLGQNYLN 416 (995)
Q Consensus 394 ~~p~~l~~l~~--L~~L~l~~N~l~ 416 (995)
..+..+..+.. ++.|++++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44444444444 245555555554
No 368
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=1.4e-18 Score=176.45 Aligned_cols=155 Identities=23% Similarity=0.319 Sum_probs=118.7
Q ss_pred cEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCC-CccchhhhccccccccccCCCCCCccCcccccceeeccC
Q 001922 457 GQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPP-SIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQ 535 (995)
Q Consensus 457 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 535 (995)
+.+++++|+++ .+|..+.. +|+.|+|++|+|++..+. .|+.+++|+.|+|++|+|++..|..|+.+++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57888888886 56765543 788888888888865554 478888888888888888887788888888888888888
Q ss_pred CcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCCCCC
Q 001922 536 NNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLCGTL 614 (995)
Q Consensus 536 N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~~ 614 (995)
|+|++..|..|.++++|++|+|++|+|++.+|..+..+++|+.|++++|++++..+...-...+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 8888777777888888888888888888888888888888888888888888776532111112233455666667644
No 369
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.75 E-value=3.7e-19 Score=197.42 Aligned_cols=282 Identities=16% Similarity=0.148 Sum_probs=185.2
Q ss_pred CCCCCeEeccCCcccCc--cccCc-ccccceecccccccc--CCCcccccccccccccccccccccccCCccccC-----
Q 001922 91 LDKLTNLSLAGNNFTGS--IEIGN-LSSLQFLNISNNQFS--GGLDWNYSSLVNLEVFDAYNNNFTALLPVGILK----- 160 (995)
Q Consensus 91 l~~L~~L~L~~n~l~~~--~~~~~-l~~L~~L~Ls~N~i~--~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~----- 160 (995)
+.++++|.++++ +.+. ..+.. +++|++|||++|+|. ......+ +.+..+.+..|.| .+.+|.+
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~~ 96 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNGV 96 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETTE
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhccccccc
Confidence 667888888864 2221 12334 788999999999987 3322222 2244455555533 3456667
Q ss_pred ---CCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccc---cCCCCcccCCC
Q 001922 161 ---LEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVF---EGGIPREVGKL 234 (995)
Q Consensus 161 ---l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~---~~~~p~~~~~l 234 (995)
+++|+.|+|.+ .++...+.+|.++++|+.|++++|.++.+.+.+|.++.++..+.++.+... ...-...|..+
T Consensus 97 ~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~ 175 (329)
T 3sb4_A 97 TKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEG 175 (329)
T ss_dssp EEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEES
T ss_pred ccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccc
Confidence 88888888888 777666777888888888888888888777788888777776665532111 11112344455
Q ss_pred Cccc-EEECcCCCCCCccCccc----cCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCC
Q 001922 235 VNLV-HLDLSSCELDGQIPHEI----GNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQL 309 (995)
Q Consensus 235 ~~L~-~L~Ls~n~l~~~~~~~~----~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 309 (995)
.+|+ .+.+.... .++..+ ....+++.+.+.++-...........+++|+.|+|++|.++.+.+.+|.++++|
T Consensus 176 ~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L 252 (329)
T 3sb4_A 176 EPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYL 252 (329)
T ss_dssp CCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTC
T ss_pred cccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCC
Confidence 5665 44443321 112111 123444555444332111111111236788888888888887777788888888
Q ss_pred CEEEccCCcCCCCCCccccCCCCcc-eEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceee
Q 001922 310 KLFNLFMNRLHGSIPDYLADLPNLE-TLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILI 385 (995)
Q Consensus 310 ~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 385 (995)
+.+++.+| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.++++|+.|++++|+++...+..|.++++|+.++
T Consensus 253 ~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 253 LKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp CEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 88888887 7766777888888888 888887 77767778888888888888888888866677888888888776
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=6.6e-19 Score=215.23 Aligned_cols=75 Identities=21% Similarity=0.253 Sum_probs=30.9
Q ss_pred ccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccC
Q 001922 339 WQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLN 416 (995)
Q Consensus 339 ~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~ 416 (995)
+.|.+. ..|..+..+++|+.|+|++|.+. .+|..+..+++|+.|+|++|.+. .+|..++.+.+|+.|+|++|.|+
T Consensus 209 ~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~ 283 (727)
T 4b8c_D 209 IENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT 283 (727)
T ss_dssp --------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS
T ss_pred ccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC
Confidence 334444 44555555555555555555555 44444444444444444444443 34444444444444444444444
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=1.4e-18 Score=185.73 Aligned_cols=170 Identities=25% Similarity=0.295 Sum_probs=80.8
Q ss_pred cccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCcee
Q 001922 112 NLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYL 191 (995)
Q Consensus 112 ~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L 191 (995)
.+.++..+++++|.+++.. .+..+++|++|++++|+|+.+ | .+..+++|++|+|++|++++..+ +..+++|++|
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQSL-A-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcccc-h-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 3444444555555544332 344455555555555555542 2 45555666666666666653322 5566666666
Q ss_pred eccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccc
Q 001922 192 SLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLL 271 (995)
Q Consensus 192 ~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l 271 (995)
+|++|++++. |.. .. ++|++|+|++|++++. ..+..+++|+.|++++|++
T Consensus 91 ~L~~N~l~~l-~~~-~~--------------------------~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i 140 (263)
T 1xeu_A 91 SVNRNRLKNL-NGI-PS--------------------------ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKL 140 (263)
T ss_dssp ECCSSCCSCC-TTC-CC--------------------------SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccCCc-Ccc-cc--------------------------CcccEEEccCCccCCC--hhhcCcccccEEECCCCcC
Confidence 6666665532 110 00 2344444444444421 1244444444444444444
Q ss_pred cCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCC
Q 001922 272 SGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHG 321 (995)
Q Consensus 272 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 321 (995)
++. + .+..+++|++|+|++|++++. ..+..+++|+.|++++|++.+
T Consensus 141 ~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 141 KSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 432 2 344455555555555555543 344455555555555555543
No 372
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=6.5e-18 Score=189.84 Aligned_cols=163 Identities=23% Similarity=0.154 Sum_probs=134.6
Q ss_pred CccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCcccc-ccCCCCEEEccCCcCCCCCCccccCCCCcceEEecc
Q 001922 262 DTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFI-NLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQ 340 (995)
Q Consensus 262 ~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 340 (995)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|..+++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 57888999888 4666554 4689999999999988888887 899999999999999987778899999999999999
Q ss_pred CcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCccc---ccCCCCcEEEecCCccCC
Q 001922 341 NNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERL---GACYSLTRVRLGQNYLNG 417 (995)
Q Consensus 341 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l---~~l~~L~~L~l~~N~l~~ 417 (995)
|+|++..+..|..+++|++|+|++|+|++..|..|..+++|+.|+|++|++.+..+..+ ..+++|+.|+|++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 99998888888999999999999999998888889899999999999998877655555 568888888888888886
Q ss_pred CCCCCcccCC
Q 001922 418 SIPDGFIYLP 427 (995)
Q Consensus 418 ~~p~~~~~l~ 427 (995)
..+..+..++
T Consensus 178 l~~~~~~~l~ 187 (361)
T 2xot_A 178 LPLTDLQKLP 187 (361)
T ss_dssp CCHHHHHHSC
T ss_pred cCHHHhhhcc
Confidence 5555555544
No 373
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.72 E-value=1.2e-17 Score=177.86 Aligned_cols=137 Identities=20% Similarity=0.157 Sum_probs=105.3
Q ss_pred ccCCCeeeccCceEEEEEEe-CCCcE--EEEEEecCCCCCC-----------------------hhHHHHHHHHHHhccC
Q 001922 688 VKDGNVIGRGGAGIVYHGKM-PNGVE--IAVKKLLGFGTHS-----------------------HDHGFRAEIQTLGNIR 741 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~-~~~~~--vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~ 741 (995)
|+..+.||+|+||.||+|.. .+|+. ||||++....... ....+.+|+.+++++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999987 68889 9999874321110 0135788999999998
Q ss_pred CCCc--eeEeEEEecCCcceEEEEeccC-C----ChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecC
Q 001922 742 HRNI--VRLLAFCSNKETNLLVYEYMRN-G----SLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLH-HDCSPLIVHRD 813 (995)
Q Consensus 742 hpni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH-~~~~~~iiHrD 813 (995)
|+++ +..+++ +..++||||+.+ | +|.++... .++..+..++.|++.|+.||| +.+ |+|||
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~g---ivHrD 196 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAE---LVHAD 196 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSC---EECSS
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCC---EEeCC
Confidence 8764 333332 367999999942 4 66665432 123456789999999999999 888 99999
Q ss_pred CCCCCEEECCCCCeEEeeecccccc
Q 001922 814 VKSNNILLNSAFEAHVADFGLAKFL 838 (995)
Q Consensus 814 lkp~Nill~~~~~vkl~DfGla~~~ 838 (995)
|||+|||++. .++|+|||+|...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999764
No 374
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=2.5e-17 Score=175.96 Aligned_cols=170 Identities=25% Similarity=0.295 Sum_probs=91.2
Q ss_pred chhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCe
Q 001922 208 NLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVN 287 (995)
Q Consensus 208 ~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~ 287 (995)
++.++..++++.+.+.. ++ .+..+++|++|++++|.++. ++ .+..+++|+.|++++|++++..+ +.++++|++
T Consensus 17 ~l~~l~~l~l~~~~i~~--~~-~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD--LV-SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTS--EE-CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccc--cc-chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCE
Confidence 44455555555443322 22 34455566666666666652 33 45555666666666666654332 566666666
Q ss_pred EeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCcee
Q 001922 288 LDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKL 367 (995)
Q Consensus 288 L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 367 (995)
|+|++|++++..+ +.. ++|+.|++++|++++. ..+..+++|+.|+|++|++++. + .+..+++|++|+|++|++
T Consensus 90 L~L~~N~l~~l~~--~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 90 LSVNRNRLKNLNG--IPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp EECCSSCCSCCTT--CCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCC
T ss_pred EECCCCccCCcCc--ccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcC
Confidence 6666666664322 112 5666666666666542 2355666666666666666543 2 455566666666666666
Q ss_pred cccCCCcCcCCCccceeeccccccCC
Q 001922 368 TGTIPTDLCSSNQLRILILLKNFLFG 393 (995)
Q Consensus 368 ~~~~p~~~~~l~~L~~L~l~~N~l~~ 393 (995)
++. ..+..+++|+.|++++|.+.+
T Consensus 163 ~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 163 TNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp CBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred cch--HHhccCCCCCEEeCCCCcccC
Confidence 543 344455555555555555433
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.6e-17 Score=167.81 Aligned_cols=108 Identities=22% Similarity=0.332 Sum_probs=51.8
Q ss_pred CCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCc-CcCcCCccccccCCCC
Q 001922 232 GKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNA-LTGEIPYSFINLRQLK 310 (995)
Q Consensus 232 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~ 310 (995)
..+++|++|++++|++++..+..++.+++|++|++++|++++..|..+..+++|++|++++|. ++ .+| .+..+++|+
T Consensus 85 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~ 162 (197)
T 4ezg_A 85 SGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELK 162 (197)
T ss_dssp TTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCC
T ss_pred hcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCC
Confidence 344555555555555554444444444444444455454444444445555555555555554 33 222 344455555
Q ss_pred EEEccCCcCCCCCCccccCCCCcceEEeccCcc
Q 001922 311 LFNLFMNRLHGSIPDYLADLPNLETLGLWQNNF 343 (995)
Q Consensus 311 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 343 (995)
.|++++|++++ ++ .+..+++|+.|++++|++
T Consensus 163 ~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 163 SLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 55555555443 22 344444455555544444
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=3.6e-17 Score=165.94 Aligned_cols=162 Identities=19% Similarity=0.188 Sum_probs=122.5
Q ss_pred CCcEEEcCCCcccccCCc-cccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeec
Q 001922 455 RLGQLNLSNNLLSGPLPF-SLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDM 533 (995)
Q Consensus 455 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 533 (995)
++++|+|++|++++..+. .+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|..|..+++|++|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 688999999999876664 4889999999999999999888999999999999999999999888888999999999999
Q ss_pred cCCcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCCCCCCcccccccCCCCccCCCC
Q 001922 534 SQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPESGQFTVFNASSFAGNPQLCGT 613 (995)
Q Consensus 534 s~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~~c~~ 613 (995)
++|+|++.+|..+..+++|++|+|++|++++..+-..- ...++...+..+.....-|. .+......++..+..-|..
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~-~~~l~~~~~~~~~~~C~~P~--~l~~~~l~~l~~~~~~C~~ 186 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWF-AEWLRKKSLNGGAARCGAPS--KVRDVQIKDLPHSEFKCSS 186 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHH-HHHHHHHCCSGGGCBBCSST--TTTTSBGGGSCTTTCCCCC
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHH-HHHHHHcCCCCCCCCCCCCh--HHcCCChhhCcHhhcCcCC
Confidence 99999998899999999999999999999886552210 11122223444444433343 2344444556666666776
Q ss_pred CCCCCC
Q 001922 614 LLNNPC 619 (995)
Q Consensus 614 ~~~~~c 619 (995)
+.+..|
T Consensus 187 ~~~~~c 192 (192)
T 1w8a_A 187 ENSEGC 192 (192)
T ss_dssp C---CC
T ss_pred CCCCCC
Confidence 555444
No 377
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.69 E-value=4.6e-17 Score=165.99 Aligned_cols=152 Identities=16% Similarity=0.214 Sum_probs=100.2
Q ss_pred CCCCcccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCE
Q 001922 232 GKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKL 311 (995)
Q Consensus 232 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 311 (995)
..+++|++|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..+..|..+++|+.
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 45667777777777777 444 56677777777777775542 235677777777777777777666777777777777
Q ss_pred EEccCCcCCCCCCccccCCCCcceEEeccCc-ccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccc
Q 001922 312 FNLFMNRLHGSIPDYLADLPNLETLGLWQNN-FTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNF 390 (995)
Q Consensus 312 L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~ 390 (995)
|++++|++++..|..+..+++|++|++++|+ ++ .+| .+..+++|++|++++|++++ ++ .+..+++|+.|++++|+
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC-
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCcc
Confidence 7777777776666677777777777777776 44 334 46667777777777777763 22 44455555555555554
Q ss_pred c
Q 001922 391 L 391 (995)
Q Consensus 391 l 391 (995)
+
T Consensus 193 i 193 (197)
T 4ezg_A 193 I 193 (197)
T ss_dssp -
T ss_pred c
Confidence 4
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.68 E-value=1.4e-17 Score=184.67 Aligned_cols=284 Identities=12% Similarity=0.069 Sum_probs=210.1
Q ss_pred cccccceeccccccccCCCcccccc-ccccccccccccccc--ccCCccccCCCCCceeeccCccccccCCccccC----
Q 001922 112 NLSSLQFLNISNNQFSGGLDWNYSS-LVNLEVFDAYNNNFT--ALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGE---- 184 (995)
Q Consensus 112 ~l~~L~~L~Ls~N~i~~~~~~~~~~-l~~L~~L~Ls~n~i~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~---- 184 (995)
.+.+|+.|.++++ +....-..+.. +++|++|||++|+|. ...+..+ +.++.+.+..|.| .+..|.+
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~---~~~~~~~~~~~~I---~~~aF~~~~~~ 95 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTY---PNGKFYIYMANFV---PAYAFSNVVNG 95 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSS---GGGCCEEECTTEE---CTTTTEEEETT
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccc---ccccccccccccc---CHHHhcccccc
Confidence 4678899999875 22111123333 788999999999998 4333333 3356666666644 2455666
Q ss_pred ----CCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCC----CCCccCcccc
Q 001922 185 ----LQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCE----LDGQIPHEIG 256 (995)
Q Consensus 185 ----l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~----l~~~~~~~~~ 256 (995)
+++|+.|+|.+ .++.+.+.+|.++++|++|+++.|.+.. ..+..|..+.++..+.+..+. ........|.
T Consensus 96 ~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~-i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~ 173 (329)
T 3sb4_A 96 VTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPN-LLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFI 173 (329)
T ss_dssp EEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCE-ECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEE
T ss_pred cccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccc-cchhhhcCCCceEEecCcchhhhhccccccccccc
Confidence 99999999999 8997888899999999999999776543 345678888888888877632 2323344566
Q ss_pred CccccC-ccccccccccCCCCcc----ccCcCCCCeEeccCCcCcCcCCccc-cccCCCCEEEccCCcCCCCCCccccCC
Q 001922 257 NLKLLD-TVFLHINLLSGSIPKQ----LGNLTNLVNLDLSNNALTGEIPYSF-INLRQLKLFNLFMNRLHGSIPDYLADL 330 (995)
Q Consensus 257 ~l~~L~-~L~l~~N~l~~~~p~~----l~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l 330 (995)
++..|+ .+.+.... .++.. -....+++.+.+.++-.. .....+ ..+++|+.++|++|+++.+.+.+|.++
T Consensus 174 ~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~ 249 (329)
T 3sb4_A 174 EGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQK 249 (329)
T ss_dssp ESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTC
T ss_pred cccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceecHhhhhCC
Confidence 666665 33333221 12221 123567888888776332 222222 247899999999999997778899999
Q ss_pred CCcceEEeccCcccccCCCcccCCCCCC-eEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEE
Q 001922 331 PNLETLGLWQNNFTGVIPENLGQNGKLQ-VLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVR 409 (995)
Q Consensus 331 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~ 409 (995)
++|+.|+|.+| ++.+.+.+|.++++|+ .+++.+ .++...+..|.++.+|+.++++.|.+....+..|.++++|+.++
T Consensus 250 ~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 250 KYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp TTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred CCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 99999999998 8878889999999999 999998 78767788999999999999999999988899999999999987
Q ss_pred e
Q 001922 410 L 410 (995)
Q Consensus 410 l 410 (995)
.
T Consensus 328 ~ 328 (329)
T 3sb4_A 328 K 328 (329)
T ss_dssp C
T ss_pred c
Confidence 4
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.66 E-value=1.1e-16 Score=158.70 Aligned_cols=135 Identities=21% Similarity=0.196 Sum_probs=120.9
Q ss_pred CCCCcEEEcCCCccc-ccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCccccccee
Q 001922 453 PDRLGQLNLSNNLLS-GPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYL 531 (995)
Q Consensus 453 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 531 (995)
+++|++|++++|+++ +.+|..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|++++.+|..+..+++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 467999999999998 78898899999999999999999965 789999999999999999998788888889999999
Q ss_pred eccCCcccCCC-ccccccccccCeEeccccccccccC---cccccCCcccEEeccCCCCCCC
Q 001922 532 DMSQNNLSGSI-PPEISNVRILNYLNLSRNHLNQNIP---KSIGSMKSLTIADFSFNDFSGK 589 (995)
Q Consensus 532 ~Ls~N~l~~~i-p~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~g~ 589 (995)
+|++|++++.. +..+..+++|++|+|++|++++..+ ..+..+++|+.|++++|.+...
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 99999998532 2789999999999999999987555 4899999999999999998753
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.65 E-value=1.2e-16 Score=155.02 Aligned_cols=129 Identities=22% Similarity=0.259 Sum_probs=115.6
Q ss_pred CCCCcEEEcCCCccc-ccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCccccccee
Q 001922 453 PDRLGQLNLSNNLLS-GPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYL 531 (995)
Q Consensus 453 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 531 (995)
+++++.|++++|.++ +.+|..+..+++|+.|+|++|++++. ..++.+++|+.|+|++|.+++.+|..++.+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367999999999998 78898899999999999999999965 789999999999999999998788888889999999
Q ss_pred eccCCcccCC-CccccccccccCeEeccccccccccC---cccccCCcccEEeccC
Q 001922 532 DMSQNNLSGS-IPPEISNVRILNYLNLSRNHLNQNIP---KSIGSMKSLTIADFSF 583 (995)
Q Consensus 532 ~Ls~N~l~~~-ip~~l~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~l~ls~ 583 (995)
++++|++++. .|..+..+++|++|+|++|++++..+ ..+..+++|+.||+++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 9999999863 34889999999999999999988655 5789999999999874
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=4.7e-16 Score=157.64 Aligned_cols=128 Identities=23% Similarity=0.299 Sum_probs=102.9
Q ss_pred cEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCC
Q 001922 457 GQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQN 536 (995)
Q Consensus 457 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 536 (995)
+.+++++|+++ .+|..+. ++|+.|+|++|+|+ .+|..|..+++|+.|+|++|+|++..|..|..+++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 46788888887 5665543 57888888888887 67778888888888888888888777777888888888888888
Q ss_pred cccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCC
Q 001922 537 NLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 537 ~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 588 (995)
+|++..|..|..+++|++|+|++|+|++..+..+..+++|+.|++++|++.+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8887777788888888888888888887666678888888888888777654
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.63 E-value=6.9e-16 Score=154.34 Aligned_cols=134 Identities=21% Similarity=0.191 Sum_probs=113.0
Q ss_pred CcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccC
Q 001922 456 LGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQ 535 (995)
Q Consensus 456 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 535 (995)
.+.+++++|+++ .+|..+ .++|+.|+|++|++++..+..++.+++|+.|+|++|++++..+..++.+++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 467888888888 456544 36899999999999977777788999999999999999976666788999999999999
Q ss_pred CcccCCCccccccccccCeEeccccccccccCcccccCCcccEEeccCCCCCCCCCC
Q 001922 536 NNLSGSIPPEISNVRILNYLNLSRNHLNQNIPKSIGSMKSLTIADFSFNDFSGKLPE 592 (995)
Q Consensus 536 N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 592 (995)
|++++..+..+..+++|++|+|++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 999977777788999999999999999876666678899999999999999987763
No 383
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=6.9e-16 Score=152.89 Aligned_cols=136 Identities=24% Similarity=0.240 Sum_probs=109.1
Q ss_pred CcccEEECcCCCCC-CccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEE
Q 001922 235 VNLVHLDLSSCELD-GQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFN 313 (995)
Q Consensus 235 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 313 (995)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|+|++|.+++.+|..+.++++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 67899999999987 67787788888888888888888865 6788888888888888888877777777788888888
Q ss_pred ccCCcCCCCC-CccccCCCCcceEEeccCcccccCC---CcccCCCCCCeEEecCceecccCCC
Q 001922 314 LFMNRLHGSI-PDYLADLPNLETLGLWQNNFTGVIP---ENLGQNGKLQVLDLSSNKLTGTIPT 373 (995)
Q Consensus 314 L~~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~N~l~~~~p~ 373 (995)
+++|++++.. +..+..+++|+.|++++|++++..+ ..+..+++|++|++++|.+. .+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~-~~~~ 164 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ-EAPD 164 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC-BCCS
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh-hccc
Confidence 8888888542 2677888888888888888886544 36778888888888888876 4454
No 384
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.61 E-value=4.9e-16 Score=171.17 Aligned_cols=138 Identities=11% Similarity=0.030 Sum_probs=99.5
Q ss_pred ccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCC-------------CChhHH--------HHHHHHHHhccCCCCce
Q 001922 688 VKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGT-------------HSHDHG--------FRAEIQTLGNIRHRNIV 746 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~-------------~~~~~~--------~~~E~~~l~~l~hpniv 746 (995)
|++++.||+|+||.||+|...+|+.||||+++.... ...... ..+|+..+.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 788899999999999999998999999998742110 001111 23456666666444432
Q ss_pred eEeEEEecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCC-
Q 001922 747 RLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAF- 825 (995)
Q Consensus 747 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~- 825 (995)
...-+.. ...++||||++|++|.++... .....++.|++.+|.|+|+.| ||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~--------~~~~~l~~qll~~l~~lH~~g---IVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV--------PDPASLYADLIALILRLAKHG---LIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC--------SCHHHHHHHHHHHHHHHHHTT---EECSCCSTTSEEEEEEEC
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc--------HHHHHHHHHHHHHHHHHHHCC---CcCCCCCHHHEEEeCCCC
Confidence 1111111 234799999999998776531 123467899999999999888 99999999999998876
Q ss_pred ---------CeEEeeecccccc
Q 001922 826 ---------EAHVADFGLAKFL 838 (995)
Q Consensus 826 ---------~vkl~DfGla~~~ 838 (995)
.+.|+||+.+-..
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~ 265 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSM 265 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEET
T ss_pred cccccccccceEEEEeCCcccC
Confidence 3899999987653
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=5.2e-15 Score=149.90 Aligned_cols=128 Identities=28% Similarity=0.340 Sum_probs=99.9
Q ss_pred cEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCC
Q 001922 238 VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMN 317 (995)
Q Consensus 238 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 317 (995)
+.+++++|.++ .+|..+. ++|+.|++++|+++ .+|..|.++++|++|+|++|.|++..+..|.++++|+.|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 56788888887 4555443 57778888888887 56677888888888888888888777777888888888888888
Q ss_pred cCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecc
Q 001922 318 RLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTG 369 (995)
Q Consensus 318 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 369 (995)
+|++..|..|..+++|+.|+|++|+|++..+..|..+++|++|+|++|++..
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 8887777778888888888888888886666677788888888888888763
No 386
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.58 E-value=1.4e-15 Score=147.23 Aligned_cols=128 Identities=21% Similarity=0.222 Sum_probs=90.5
Q ss_pred CcccEEECcCCCCC-CccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEE
Q 001922 235 VNLVHLDLSSCELD-GQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFN 313 (995)
Q Consensus 235 ~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 313 (995)
++|++|++++|.++ +.+|..+..+++|+.|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+++|+.|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 56788888888877 66677777777777777777777754 5677777777777777777766676666677777777
Q ss_pred ccCCcCCCC-CCccccCCCCcceEEeccCcccccCC---CcccCCCCCCeEEecC
Q 001922 314 LFMNRLHGS-IPDYLADLPNLETLGLWQNNFTGVIP---ENLGQNGKLQVLDLSS 364 (995)
Q Consensus 314 L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~L~~ 364 (995)
+++|++++. .+..+..+++|++|++++|++++..+ ..+..+++|++|++++
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 777777753 23666777777777777777775544 3566677777776653
No 387
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.58 E-value=1.2e-14 Score=164.38 Aligned_cols=265 Identities=11% Similarity=0.077 Sum_probs=123.5
Q ss_pred cccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeec
Q 001922 114 SSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSL 193 (995)
Q Consensus 114 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L 193 (995)
..++.+.+.+ .++.+...+|.+. +|+.+++..+ ++.+...+|.++ +|+.+++.. .++...+.+|.++++|+.++|
T Consensus 113 ~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l 187 (401)
T 4fdw_A 113 KGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADL 187 (401)
T ss_dssp SSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEEC
T ss_pred CCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeec
Confidence 4455555433 3444444555543 4555555444 555555555553 455555553 444344455555555555555
Q ss_pred cCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccccccC
Q 001922 194 AGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSG 273 (995)
Q Consensus 194 s~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~ 273 (995)
++|+++......|. .++|+.+.+ ..+ ++.....+|.++++|+.+.+..| ++.
T Consensus 188 ~~n~l~~I~~~aF~-~~~L~~l~l-------------------------p~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~ 239 (401)
T 4fdw_A 188 SKTKITKLPASTFV-YAGIEEVLL-------------------------PVT-LKEIGSQAFLKTSQLKTIEIPEN-VST 239 (401)
T ss_dssp TTSCCSEECTTTTT-TCCCSEEEC-------------------------CTT-CCEECTTTTTTCTTCCCEECCTT-CCE
T ss_pred CCCcceEechhhEe-ecccCEEEe-------------------------CCc-hheehhhHhhCCCCCCEEecCCC-ccC
Confidence 55555533333333 234444444 321 33233333444444444444332 222
Q ss_pred CCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC-----CCCCccccCCCCcceEEeccCcccccCC
Q 001922 274 SIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH-----GSIPDYLADLPNLETLGLWQNNFTGVIP 348 (995)
Q Consensus 274 ~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p 348 (995)
+-..+|.+ .+|+.+.+. |.++.+...+|.++++|+.+++.+|.+. ...+.+|.++++|+.++|. +.++.+..
T Consensus 240 I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~ 316 (401)
T 4fdw_A 240 IGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQ 316 (401)
T ss_dssp ECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECT
T ss_pred cccccccc-CCccEEEeC-CCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhh
Confidence 22333433 344444442 2333344444444445555544444432 2333445555555555555 23444444
Q ss_pred CcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCC-CCcEEEecCCccC
Q 001922 349 ENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACY-SLTRVRLGQNYLN 416 (995)
Q Consensus 349 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~-~L~~L~l~~N~l~ 416 (995)
.+|.++++|+.++|..| ++..-+..|.++ +|+.+++.+|.+....+..|.++. +++.|++..+.+.
T Consensus 317 ~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 317 GLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred hhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 45555555555555333 333334445445 555555555554444444555552 5666766666543
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.57 E-value=9e-15 Score=146.16 Aligned_cols=131 Identities=23% Similarity=0.211 Sum_probs=90.7
Q ss_pred ccEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccC
Q 001922 237 LVHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFM 316 (995)
Q Consensus 237 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 316 (995)
.+.+++++|+++ .+|..+. ++|+.|++++|++++..+..|..+++|++|++++|.|++..+..|.++++|+.|++++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCCC--CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 466777777777 3343332 5677777777777766556667777777777777777766666677777777777777
Q ss_pred CcCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceeccc
Q 001922 317 NRLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGT 370 (995)
Q Consensus 317 N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 370 (995)
|+|++..+..+..+++|++|++++|++++..+..+..+++|++|+|++|++++.
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeecc
Confidence 777766666667777777777777777765555566677777777777777643
No 389
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=2.8e-14 Score=161.46 Aligned_cols=266 Identities=12% Similarity=0.082 Sum_probs=204.9
Q ss_pred CCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEE
Q 001922 161 LEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHL 240 (995)
Q Consensus 161 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L 240 (995)
+..++.+.+.. .++.....+|.+. +|+.+.+..| ++.+...+|.+. +|+.+.+.. ++. ..-+..|.++++|+.+
T Consensus 112 ~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~-~I~~~aF~~c~~L~~l 185 (401)
T 4fdw_A 112 LKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLE-QLKEDIFYYCYNLKKA 185 (401)
T ss_dssp CSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCC-EECSSTTTTCTTCCEE
T ss_pred cCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-Ccc-EehHHHhhCcccCCee
Confidence 34555555543 3443444555553 5666666554 554555556553 466666652 222 2234578888999999
Q ss_pred ECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC
Q 001922 241 DLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH 320 (995)
Q Consensus 241 ~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 320 (995)
++++|+++......|. ..+|+.+.+..+ ++.+...+|.++++|+.+++..| ++.+...+|.+ .+|+.+.+ .+.++
T Consensus 186 ~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~ 260 (401)
T 4fdw_A 186 DLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVT 260 (401)
T ss_dssp ECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCC
T ss_pred ecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCcc
Confidence 9999999866666666 589999999855 77677789999999999999986 66677888988 89999999 56677
Q ss_pred CCCCccccCCCCcceEEeccCccc-----ccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCC
Q 001922 321 GSIPDYLADLPNLETLGLWQNNFT-----GVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPI 395 (995)
Q Consensus 321 ~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~ 395 (995)
.+...+|.++++|+.+++.+|.+. .+.+..|.++++|+.++|.+ .++..-...|.++.+|+.+.+..| +...-
T Consensus 261 ~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~ 338 (401)
T 4fdw_A 261 NIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQIN 338 (401)
T ss_dssp EECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEEC
T ss_pred EEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEc
Confidence 677889999999999999998875 57788999999999999995 577666788999999999999665 66667
Q ss_pred CcccccCCCCcEEEecCCccCCCCCCCcccCC-CCceeeccCcccc
Q 001922 396 PERLGACYSLTRVRLGQNYLNGSIPDGFIYLP-GLNLAELQSNYLS 440 (995)
Q Consensus 396 p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~l~l~~n~l~ 440 (995)
+..|.++ +|+.+++++|.+....+..|..++ .+..+.+..+.+.
T Consensus 339 ~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 339 FSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp TTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred HHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 7889999 999999999999988888998885 6888888877654
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=8.3e-15 Score=146.21 Aligned_cols=130 Identities=18% Similarity=0.193 Sum_probs=107.4
Q ss_pred CCCCCcEEEcCCCcccccCCccccCC-CCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccce
Q 001922 452 NPDRLGQLNLSNNLLSGPLPFSLSNF-SSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTY 530 (995)
Q Consensus 452 ~~~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 530 (995)
.+.+|+.|++++|+++. +|. +..+ ++|+.|+|++|+|++. ..++.+++|+.|+|++|+|++..|..++.+++|++
T Consensus 17 ~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 17 NAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp CTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred CcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 35678899999999984 454 4444 4999999999999864 67889999999999999998544444588999999
Q ss_pred eeccCCcccCCCcc--ccccccccCeEeccccccccccCcc----cccCCcccEEeccCCCCC
Q 001922 531 LDMSQNNLSGSIPP--EISNVRILNYLNLSRNHLNQNIPKS----IGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 531 L~Ls~N~l~~~ip~--~l~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~ 587 (995)
|+|++|+++ .+|. .+..+++|+.|+|++|+++. +|.. +..+++|+.||+++|...
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHH
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHH
Confidence 999999996 6776 88899999999999999975 6664 889999999999998765
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=7.7e-15 Score=146.47 Aligned_cols=109 Identities=19% Similarity=0.194 Sum_probs=67.3
Q ss_pred ccCCCCCCeEeccCCcccCccccCccc-ccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCce
Q 001922 88 ILRLDKLTNLSLAGNNFTGSIEIGNLS-SLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKY 166 (995)
Q Consensus 88 ~~~l~~L~~L~L~~n~l~~~~~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~ 166 (995)
+.++.+|++|++++|+++....+..+. +|++|+|++|.|++. ..|..+++|++|++++|+|+++.+..|..+++|++
T Consensus 15 ~~~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 92 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTE 92 (176)
T ss_dssp EECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCE
T ss_pred cCCcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCE
Confidence 445566666677666666544444444 666666666666654 45666666666666666666654444566666666
Q ss_pred eeccCccccccCCc--cccCCCCCceeeccCCccc
Q 001922 167 LDLGGNYFFGKIPN--SYGELQGLEYLSLAGNDLT 199 (995)
Q Consensus 167 L~L~~N~l~~~~p~--~l~~l~~L~~L~Ls~N~l~ 199 (995)
|+|++|.|+ .+|. .+..+++|++|++++|.++
T Consensus 93 L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 93 LILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp EECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred EECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 666666664 3444 5666666666666666665
No 392
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.51 E-value=3.7e-13 Score=152.91 Aligned_cols=67 Identities=6% Similarity=-0.035 Sum_probs=35.9
Q ss_pred ccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCceeecc
Q 001922 126 FSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLA 194 (995)
Q Consensus 126 i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls 194 (995)
++.+...+|.++.+|+.+.+.. .++.+...+|.++++|+.++|..+ ++..-..+|.++.+|+.+.+.
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p 125 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLP 125 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhccc
Confidence 4445555566666666666642 355555556666666666666533 333334455555555555444
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.49 E-value=4.8e-13 Score=151.97 Aligned_cols=74 Identities=8% Similarity=0.015 Sum_probs=49.1
Q ss_pred ccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCC
Q 001922 109 EIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGEL 185 (995)
Q Consensus 109 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l 185 (995)
.|.++++|+.+.|.. .++.+...+|.++++|+.+++.++ ++.+...+|.++.+|+.+.+..+ +......+|.+.
T Consensus 66 AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~~i~~~aF~~~ 139 (394)
T 4fs7_A 66 AFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LKSIGVEAFKGC 139 (394)
T ss_dssp TTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTC
T ss_pred HhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-eeeecceeeecc
Confidence 577777788887764 366666777777888888877644 66666677777777777766544 333344445444
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.49 E-value=6.5e-16 Score=157.58 Aligned_cols=125 Identities=23% Similarity=0.240 Sum_probs=89.8
Q ss_pred CCcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeecc
Q 001922 455 RLGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMS 534 (995)
Q Consensus 455 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 534 (995)
+|++|+|++|++++ +| .+.++++|+.|+|++|+++ .+|..+..+++|+.|+|++|++++ +| .++.+++|++|+|+
T Consensus 49 ~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~ 123 (198)
T 1ds9_A 49 ACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMS 123 (198)
T ss_dssp TCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEES
T ss_pred CCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECC
Confidence 34445555555553 44 5666777788888888877 567777777888888888888875 55 57778888888888
Q ss_pred CCcccCCCc--cccccccccCeEeccccccccccCcc----------cccCCcccEEeccCCCCC
Q 001922 535 QNNLSGSIP--PEISNVRILNYLNLSRNHLNQNIPKS----------IGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 535 ~N~l~~~ip--~~l~~l~~L~~L~L~~N~l~~~~p~~----------~~~l~~L~~l~ls~N~l~ 587 (995)
+|++++ +| ..+..+++|++|+|++|++++.+|.. +..+++|+.|| +|.++
T Consensus 124 ~N~i~~-~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 124 NNKITN-WGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp EEECCC-HHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCcCCc-hhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 888874 33 36778888888888888887766653 77788888876 55554
No 395
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.48 E-value=4.3e-16 Score=158.92 Aligned_cols=132 Identities=21% Similarity=0.238 Sum_probs=113.5
Q ss_pred CcEEEcCCCcccccCCc------cccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccc
Q 001922 456 LGQLNLSNNLLSGPLPF------SLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLT 529 (995)
Q Consensus 456 L~~L~Ls~N~l~~~~p~------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 529 (995)
++.++++.|.++|.+|. .+..+++|+.|+|++|++++ +| .+..+++|+.|+|++|.++ .+|..+..+++|+
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~ 96 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLE 96 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCS
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCC
Confidence 34444555555554444 89999999999999999996 67 8999999999999999999 7899898899999
Q ss_pred eeeccCCcccCCCccccccccccCeEeccccccccccC-cccccCCcccEEeccCCCCCCCCCC
Q 001922 530 YLDMSQNNLSGSIPPEISNVRILNYLNLSRNHLNQNIP-KSIGSMKSLTIADFSFNDFSGKLPE 592 (995)
Q Consensus 530 ~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~g~~p~ 592 (995)
+|+|++|++++ +| .+..+++|++|+|++|++++..+ ..+..+++|+.|++++|++++.+|.
T Consensus 97 ~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 97 ELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp EEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred EEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 99999999995 66 79999999999999999987433 5789999999999999999988775
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.48 E-value=7.3e-14 Score=138.30 Aligned_cols=106 Identities=24% Similarity=0.282 Sum_probs=61.3
Q ss_pred CcEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccC
Q 001922 456 LGQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQ 535 (995)
Q Consensus 456 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 535 (995)
.+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|..+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356666666666 3554442 5566666666666655555566666666666666666644444455566666666666
Q ss_pred CcccCCCccccccccccCeEecccccccc
Q 001922 536 NNLSGSIPPEISNVRILNYLNLSRNHLNQ 564 (995)
Q Consensus 536 N~l~~~ip~~l~~l~~L~~L~L~~N~l~~ 564 (995)
|+|++..|..|.++++|++|+|++|+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 66654444445555555555555555544
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.46 E-value=1.2e-13 Score=136.76 Aligned_cols=109 Identities=22% Similarity=0.210 Sum_probs=91.7
Q ss_pred CcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccc
Q 001922 480 LQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSR 559 (995)
Q Consensus 480 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~ 559 (995)
.+.|++++|+++ .+|..+. ++|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..|..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 578899999988 5776664 7888999999999887788888999999999999999876666678899999999999
Q ss_pred cccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 560 NHLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 560 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
|+|++..|..+..+++|+.|+|++|++++..+
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 99988767778889999999999998887655
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.45 E-value=1.5e-13 Score=136.47 Aligned_cols=105 Identities=23% Similarity=0.262 Sum_probs=64.0
Q ss_pred cEEEcCCCcccccCCccccCCCCCcEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCC
Q 001922 457 GQLNLSNNLLSGPLPFSLSNFSSLQILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQN 536 (995)
Q Consensus 457 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 536 (995)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++..|..|+.+++|+.|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 56677777765 4555443 56666666666666655666666666666666666666543444566666666666666
Q ss_pred cccCCCccccccccccCeEecccccccc
Q 001922 537 NLSGSIPPEISNVRILNYLNLSRNHLNQ 564 (995)
Q Consensus 537 ~l~~~ip~~l~~l~~L~~L~L~~N~l~~ 564 (995)
+|++..+..|..+++|++|+|++|++..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 6664333346666666666666666644
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.43 E-value=2.8e-13 Score=134.56 Aligned_cols=108 Identities=19% Similarity=0.218 Sum_probs=84.8
Q ss_pred cEEEcCCCcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEecccc
Q 001922 481 QILLLSGNQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRN 560 (995)
Q Consensus 481 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N 560 (995)
+.+++++|+++ .+|..+. .+|+.|+|++|+|++..|..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67888888886 6676664 67888888888888777778888888888888888888655555678888888888888
Q ss_pred ccccccCcccccCCcccEEeccCCCCCCCCC
Q 001922 561 HLNQNIPKSIGSMKSLTIADFSFNDFSGKLP 591 (995)
Q Consensus 561 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 591 (995)
+|++..+..+..+++|+.|+|++|++....+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 8877555568888888888888888876544
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.25 E-value=1.3e-10 Score=131.87 Aligned_cols=326 Identities=12% Similarity=0.075 Sum_probs=162.3
Q ss_pred cccCCC-CCCeEeccCCccc--CccccCcccccceecccccc---ccCCCcccccccccccccccccccccccCCccccC
Q 001922 87 QILRLD-KLTNLSLAGNNFT--GSIEIGNLSSLQFLNISNNQ---FSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILK 160 (995)
Q Consensus 87 ~~~~l~-~L~~L~L~~n~l~--~~~~~~~l~~L~~L~Ls~N~---i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~ 160 (995)
+|.++. .|+++.+..+ ++ |...|.++++|+.+.++.|. ++.+...+|.++.+|+.+.+..+ ++.+...+|..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 455553 4777777653 44 23367888888888887764 55566777888888887777543 56666677788
Q ss_pred CCCCceeeccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEE
Q 001922 161 LEKLKYLDLGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHL 240 (995)
Q Consensus 161 l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L 240 (995)
+.+|+.+.+..+ +.......|..+.+|+.+.+..+ ++.+...+|.+ .+|+.+.+..+-.. .-...+..+.+++..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~--i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR--IGTNAFSECFALSTI 210 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE--ECTTTTTTCTTCCEE
T ss_pred hcccccccccce-eeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc--cccchhhhcccccee
Confidence 888888888644 33355566777778888877654 44344445543 45666655422111 123445556666666
Q ss_pred ECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCC
Q 001922 241 DLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLH 320 (995)
Q Consensus 241 ~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 320 (995)
....+.... ....+..-..... .....+.....+..+.+.. .++.....+|.++..|+.+.+..+...
T Consensus 211 ~~~~~~~~~-~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c~~L~~i~lp~~~~~ 278 (394)
T 4gt6_A 211 TSDSESYPA-IDNVLYEKSANGD----------YALIRYPSQREDPAFKIPN-GVARIETHAFDSCAYLASVKMPDSVVS 278 (394)
T ss_dssp EECCSSSCB-SSSCEEEECTTSC----------EEEEECCTTCCCSEEECCT-TEEEECTTTTTTCSSCCEEECCTTCCE
T ss_pred ccccccccc-ccceeeccccccc----------ccccccccccccceEEcCC-cceEcccceeeecccccEEecccccce
Confidence 555444331 1111100000000 0000011112222333221 122233344555555555555433322
Q ss_pred CCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccc
Q 001922 321 GSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLG 400 (995)
Q Consensus 321 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~ 400 (995)
....+|.++++|+.+.+. +.++.+....|.++.+|+.++|..+ ++..-...|.++.+|+.+.+..+ +...-...|.
T Consensus 279 -I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~ 354 (394)
T 4gt6_A 279 -IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFS 354 (394)
T ss_dssp -ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGT
T ss_pred -ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhh
Confidence 334445555555555553 3344344445555555555555443 33233444555555555555433 3333445566
Q ss_pred cCCCCcEEEecCCccCCCCCCCcccCCCCceeeccCcc
Q 001922 401 ACYSLTRVRLGQNYLNGSIPDGFIYLPGLNLAELQSNY 438 (995)
Q Consensus 401 ~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l~~n~ 438 (995)
+|.+|+.+++.++.... ..|....+|+.+.+..+.
T Consensus 355 ~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~ 389 (394)
T 4gt6_A 355 NCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGS 389 (394)
T ss_dssp TCTTCCEEEESSCHHHH---HTCBCCCCC---------
T ss_pred CCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCC
Confidence 66666666666654321 234444555555554443
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.24 E-value=6.3e-14 Score=156.99 Aligned_cols=167 Identities=21% Similarity=0.194 Sum_probs=95.9
Q ss_pred CCCCceeeccCccccccCCccccCC-----CCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCC
Q 001922 161 LEKLKYLDLGGNYFFGKIPNSYGEL-----QGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLV 235 (995)
Q Consensus 161 l~~L~~L~L~~N~l~~~~p~~l~~l-----~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~ 235 (995)
+++|++|+|++|.++......|... ++|++|+|++|.++......+.. .++
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~------------------------~L~ 126 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLP------------------------VFL 126 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHH------------------------HHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHH------------------------HHH
Confidence 4678899999998875544444332 68889999988887432222211 122
Q ss_pred cccEEECcCCCCCCccCcccc-----CccccCccccccccccC----CCCccccCcCCCCeEeccCCcCcCcC----Ccc
Q 001922 236 NLVHLDLSSCELDGQIPHEIG-----NLKLLDTVFLHINLLSG----SIPKQLGNLTNLVNLDLSNNALTGEI----PYS 302 (995)
Q Consensus 236 ~L~~L~Ls~n~l~~~~~~~~~-----~l~~L~~L~l~~N~l~~----~~p~~l~~l~~L~~L~Ls~N~l~~~~----p~~ 302 (995)
+|++|+|++|.++......++ ..+.|++|+|++|.++. .++..+..+++|++|+|++|.|++.. +..
T Consensus 127 ~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~ 206 (372)
T 3un9_A 127 RARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQ 206 (372)
T ss_dssp TEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHH
T ss_pred hccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHH
Confidence 456666666666543333332 23456666666665543 13334455666777777777766432 344
Q ss_pred ccccCCCCEEEccCCcCCCC----CCccccCCCCcceEEeccCcccccCCCcc
Q 001922 303 FINLRQLKLFNLFMNRLHGS----IPDYLADLPNLETLGLWQNNFTGVIPENL 351 (995)
Q Consensus 303 ~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 351 (995)
+...++|+.|+|++|.|++. ++..+...++|++|+|++|.|+......+
T Consensus 207 L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 207 LDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSEGRQVL 259 (372)
T ss_dssp GGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHHHHHHH
T ss_pred HhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHHHHHHH
Confidence 55556677777777766542 22333445667777777776664433333
No 402
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.24 E-value=1.3e-10 Score=131.97 Aligned_cols=316 Identities=11% Similarity=0.097 Sum_probs=194.8
Q ss_pred ccCccc-ccceeccccccccCCCccccccccccccccccccc---ccccCCccccCCCCCceeeccCccccccCCccccC
Q 001922 109 EIGNLS-SLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNN---FTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGE 184 (995)
Q Consensus 109 ~~~~l~-~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~---i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~ 184 (995)
.|.++. .|+.+.+..+ ++.+...+|.++++|+.+.+..|. ++.+...+|.++.+|+.+.+..+ ++......|..
T Consensus 58 aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~ 135 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHH 135 (394)
T ss_dssp TTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTT
T ss_pred hccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhh
Confidence 466664 5888888654 666777788888888888877664 66666677777778877777654 44345566777
Q ss_pred CCCCceeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCcc
Q 001922 185 LQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTV 264 (995)
Q Consensus 185 l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 264 (995)
+.+|+.+.+..+ ++.+....|.++.+|+.+.+.. ++.. +........+|+.+.+..+-.. ..
T Consensus 136 c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~-~~~~--I~~~aF~~~~l~~i~ip~~~~~-i~------------- 197 (394)
T 4gt6_A 136 CEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPD-SVTA--IEERAFTGTALTQIHIPAKVTR-IG------------- 197 (394)
T ss_dssp CTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCT-TCCE--ECTTTTTTCCCSEEEECTTCCE-EC-------------
T ss_pred hcccccccccce-eeeecccceecccccccccccc-eeeE--eccccccccceeEEEECCcccc-cc-------------
Confidence 777777777643 3334455566666666555542 1111 1111112234554444332211 22
Q ss_pred ccccccccCCCCccccCcCCCCeEeccCCcCcCcCCc-------------cccccCCCCEEEccCCcCCCCCCccccCCC
Q 001922 265 FLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPY-------------SFINLRQLKLFNLFMNRLHGSIPDYLADLP 331 (995)
Q Consensus 265 ~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~-------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 331 (995)
..+|.++.+++......+......-. .+.....+..+.+. +.+......+|.++.
T Consensus 198 -----------~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~ 265 (394)
T 4gt6_A 198 -----------TNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCA 265 (394)
T ss_dssp -----------TTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCS
T ss_pred -----------cchhhhccccceecccccccccccceeecccccccccccccccccccceEEcC-CcceEcccceeeecc
Confidence 33444444554444443333211111 11122334444443 233334566889999
Q ss_pred CcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEec
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLG 411 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~ 411 (995)
+|+.+.+.++..+ .....|.++.+|+.+.+. +.++......|.++.+|+.+.+..+ +...-...|.+|.+|+++.+.
T Consensus 266 ~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip 342 (394)
T 4gt6_A 266 YLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIP 342 (394)
T ss_dssp SCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEC
T ss_pred cccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEEC
Confidence 9999999876554 777889999999999996 4566566678899999999999865 555556789999999999997
Q ss_pred CCccCCCCCCCcccCCCCceeeccCccccCCCCCCCCCCCCCCCCcEEEcCCCcc
Q 001922 412 QNYLNGSIPDGFIYLPGLNLAELQSNYLSGSLPENGNSSSNPDRLGQLNLSNNLL 466 (995)
Q Consensus 412 ~N~l~~~~p~~~~~l~~L~~l~l~~n~l~~~~~~~~~~~~~~~~L~~L~Ls~N~l 466 (995)
.+ ++.+-..+|.+..+|+.+++.++..... .+.....|+.+.+..|.+
T Consensus 343 ~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~~------~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 343 SS-VTKIPESAFSNCTALNNIEYSGSRSQWN------AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TT-CCBCCGGGGTTCTTCCEEEESSCHHHHH------TCBCCCCC----------
T ss_pred cc-cCEEhHhHhhCCCCCCEEEECCceeehh------hhhccCCCCEEEeCCCCE
Confidence 65 7767778999999999999988765421 223345678887776654
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=8.8e-14 Score=155.81 Aligned_cols=45 Identities=22% Similarity=0.311 Sum_probs=22.4
Q ss_pred cccCcCCCCeEeccCCcCcCcC----CccccccCCCCEEEccCCcCCCC
Q 001922 278 QLGNLTNLVNLDLSNNALTGEI----PYSFINLRQLKLFNLFMNRLHGS 322 (995)
Q Consensus 278 ~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~L~~N~l~~~ 322 (995)
.+...++|+.|+|++|.|++.. +..+...++|+.|+|++|.|++.
T Consensus 206 ~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 206 QLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCHH
Confidence 3444455555555555555322 22233345566666666655543
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.21 E-value=9.4e-12 Score=138.79 Aligned_cols=104 Identities=21% Similarity=0.243 Sum_probs=75.8
Q ss_pred EEEcCCC-cccccCCccccCCCCCcEEEcCC-CcccCCCCCCccchhhhccccccccccCCCCCCccCcccccceeeccC
Q 001922 458 QLNLSNN-LLSGPLPFSLSNFSSLQILLLSG-NQFSGPIPPSIGELRQVLKLDLSRNSLSGEIPPAIGYCNHLTYLDMSQ 535 (995)
Q Consensus 458 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 535 (995)
.++++++ +|+ .+|. +..+++|+.|+|++ |+|++..+..|+.+.+|+.|+|++|+|++..|..|+.|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 4677777 777 4666 77778888888875 888766667777777778888888877776677777777777777777
Q ss_pred CcccCCCccccccccccCeEecccccccc
Q 001922 536 NNLSGSIPPEISNVRILNYLNLSRNHLNQ 564 (995)
Q Consensus 536 N~l~~~ip~~l~~l~~L~~L~L~~N~l~~ 564 (995)
|+|++..|..+..+. |+.|+|++|++..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 777754444444444 7777777777754
No 405
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.20 E-value=1e-11 Score=138.44 Aligned_cols=104 Identities=17% Similarity=0.098 Sum_probs=61.3
Q ss_pred EEEcCCC-cccCCCCCCccchhhhccccccc-cccCCCCCCccCcccccceeeccCCcccCCCccccccccccCeEeccc
Q 001922 482 ILLLSGN-QFSGPIPPSIGELRQVLKLDLSR-NSLSGEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSR 559 (995)
Q Consensus 482 ~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~ 559 (995)
.++++++ +|+ .+|. +..+.+|+.|+|++ |.|++..|..|+.|++|++|+|++|+|++..|..|.+|++|++|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455665 565 3555 66666666666664 666654445566666666666666666665555666666666666666
Q ss_pred cccccccCcccccCCcccEEeccCCCCCC
Q 001922 560 NHLNQNIPKSIGSMKSLTIADFSFNDFSG 588 (995)
Q Consensus 560 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 588 (995)
|+|++..|..+..++ |+.|+|++|++..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 666554444444443 6666666666553
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.12 E-value=1.2e-10 Score=124.25 Aligned_cols=145 Identities=13% Similarity=0.030 Sum_probs=111.5
Q ss_pred HHHhhccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEecCCcceEE
Q 001922 683 DILECVKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKETNLLV 761 (995)
Q Consensus 683 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv 761 (995)
.....|+.....+.|+++.||++... ++.+++|....... .....+.+|+.+++.+. +..+.++++++.+.+..|+|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 44556777777888999999999764 68999999843211 22345889999999884 67788899999888889999
Q ss_pred EEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------
Q 001922 762 YEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC------------------------------------ 805 (995)
Q Consensus 762 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~------------------------------------ 805 (995)
|||++|.++.+.... ......++.+++++++.||+..
T Consensus 89 ~e~i~G~~l~~~~~~-------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (263)
T 3tm0_A 89 MSEADGVLCSEEYED-------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEED 161 (263)
T ss_dssp EECCSSEEHHHHCCT-------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTT
T ss_pred EEecCCeehhhccCC-------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccccc
Confidence 999999999876421 1123467889999999999810
Q ss_pred --------------------CCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 806 --------------------SPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 806 --------------------~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
...++|||++|.||++++...+.|+||+.+.
T Consensus 162 ~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 162 TPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp CSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred ccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1348999999999999876556799999775
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.97 E-value=1.1e-09 Score=116.60 Aligned_cols=129 Identities=15% Similarity=0.063 Sum_probs=97.5
Q ss_pred eccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC--ceeEeEEEecCCcceEEEEeccCCChhh
Q 001922 695 GRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN--IVRLLAFCSNKETNLLVYEYMRNGSLGE 772 (995)
Q Consensus 695 G~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~~~~~~~~~lv~e~~~~gsL~~ 772 (995)
+.|..+.||++...+|+.+++|..... ....+..|+.+++.+.+.+ +.+++++...++..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 456669999998777888999987432 2345788999999986544 456888888778889999999998884
Q ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 001922 773 ALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC----------------------------------------------- 805 (995)
Q Consensus 773 ~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~----------------------------------------------- 805 (995)
... .+ ...++.++++.+..||+..
T Consensus 104 -~~~-----~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 174 (264)
T 1nd4_A 104 -SSH-----LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARL 174 (264)
T ss_dssp -TSC-----CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHH
T ss_pred -cCc-----CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHH
Confidence 211 11 1256788888888888642
Q ss_pred --------CCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 806 --------SPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 806 --------~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
...++|||++|.||+++.++.+.|+|||.+..
T Consensus 175 ~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 175 KARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999998753
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.93 E-value=2.8e-09 Score=119.19 Aligned_cols=141 Identities=15% Similarity=0.215 Sum_probs=105.1
Q ss_pred CeeeccCceEEEEEEeCCCcEEEEEEec--CCCCCChhHHHHHHHHHHhccC--CCCceeEeEEEecC---CcceEEEEe
Q 001922 692 NVIGRGGAGIVYHGKMPNGVEIAVKKLL--GFGTHSHDHGFRAEIQTLGNIR--HRNIVRLLAFCSNK---ETNLLVYEY 764 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--hpniv~~~~~~~~~---~~~~lv~e~ 764 (995)
+.++.|.++.||+++.. +..+++|+.. ..........+.+|+.+++.+. +..+++++.++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56899999999999875 4688888764 2222223456888999999996 45578888888766 457999999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC--------------------------------------- 805 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--------------------------------------- 805 (995)
++|..+.+.. ...++...+..++.+++++|+.||...
T Consensus 123 v~G~~l~~~~----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 123 VSGRVLWDQS----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp CCCBCCCCTT----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred cCCeecCCCc----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 9998875422 123677888899999999999999731
Q ss_pred ----------------CCCeEecCCCCCCEEECCCCC--eEEeeeccccc
Q 001922 806 ----------------SPLIVHRDVKSNNILLNSAFE--AHVADFGLAKF 837 (995)
Q Consensus 806 ----------------~~~iiHrDlkp~Nill~~~~~--vkl~DfGla~~ 837 (995)
...++|||+++.||+++.++. +.|+||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 245999999999999997753 68999998864
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.92 E-value=2.5e-08 Score=112.32 Aligned_cols=298 Identities=11% Similarity=0.074 Sum_probs=131.7
Q ss_pred CCCCCeEeccCCccc--CccccCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceee
Q 001922 91 LDKLTNLSLAGNNFT--GSIEIGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLD 168 (995)
Q Consensus 91 l~~L~~L~L~~n~l~--~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~ 168 (995)
..+|+++.+.. .++ |...|.++++|+.++|..+ ++.+...+|.+. +|+.+.+.. +++.+...+|... +|+.++
T Consensus 45 ~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~-~l~~I~~~aF~~~-~L~~i~ 119 (379)
T 4h09_A 45 RDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGME-RVKKFGDYVFQGT-DLDDFE 119 (379)
T ss_dssp GGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECT-TCCEECTTTTTTC-CCSEEE
T ss_pred ccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCc-eeeEeccceeccC-Cccccc
Confidence 34555555543 233 1224666666666666533 555555566554 455554432 2444444555543 566666
Q ss_pred ccCccccccCCccccCCCCCceeeccCCcccccCcccccchhhhhhhhccccccccC-----------CCCcccCCCCcc
Q 001922 169 LGGNYFFGKIPNSYGELQGLEYLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEG-----------GIPREVGKLVNL 237 (995)
Q Consensus 169 L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~-----------~~p~~~~~l~~L 237 (995)
+..+- +......|.+ .+|+...+..+ ++......|.++.+++...+..++.... .....+.....+
T Consensus 120 lp~~~-~~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (379)
T 4h09_A 120 FPGAT-TEIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTG 196 (379)
T ss_dssp CCTTC-CEECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCC
T ss_pred CCCcc-cccccccccc-ceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccc
Confidence 65442 2122333333 24444444332 3323344445555554444332211100 001111222222
Q ss_pred cEEECcCCCCCCccCccccCccccCccccccccccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCC
Q 001922 238 VHLDLSSCELDGQIPHEIGNLKLLDTVFLHINLLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMN 317 (995)
Q Consensus 238 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 317 (995)
..+.+....- ......+....+|+.+.+..+ ++.....+|.++..|+.+.+..+
T Consensus 197 ~~~~~~~~~~-------------------------~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~ 250 (379)
T 4h09_A 197 TEFTIPSTVK-------------------------TVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN 250 (379)
T ss_dssp SEEECCTTCC-------------------------EECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT
T ss_pred ccccccccee-------------------------EEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC
Confidence 3222222111 122233444444555544433 22233444455555555555443
Q ss_pred cCCCCCCccccCCCCcceEEeccCcccccCCCcccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCc
Q 001922 318 RLHGSIPDYLADLPNLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPE 397 (995)
Q Consensus 318 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~ 397 (995)
++.....+|.++.+|+.+.+..+ ++......|..+.+|+.+.+.++.++..-...|.++.+|+.+.+..+ +...-..
T Consensus 251 -v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~ 327 (379)
T 4h09_A 251 -VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVY 327 (379)
T ss_dssp -CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred -ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHH
Confidence 33333444555555555555432 33333444555555555555555444333444555555555555433 3333344
Q ss_pred ccccCCCCcEEEecCCccCCCCCCCcccC
Q 001922 398 RLGACYSLTRVRLGQNYLNGSIPDGFIYL 426 (995)
Q Consensus 398 ~l~~l~~L~~L~l~~N~l~~~~p~~~~~l 426 (995)
.|.+|.+|+.+.+..+ ++.+-..+|.+.
T Consensus 328 aF~~C~~L~~i~ip~~-v~~I~~~aF~~c 355 (379)
T 4h09_A 328 AFKNCKALSTISYPKS-ITLIESGAFEGS 355 (379)
T ss_dssp TTTTCTTCCCCCCCTT-CCEECTTTTTTS
T ss_pred HhhCCCCCCEEEECCc-cCEEchhHhhCC
Confidence 5666666666666543 444444555443
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.89 E-value=3.1e-08 Score=111.57 Aligned_cols=302 Identities=13% Similarity=0.046 Sum_probs=205.2
Q ss_pred cCcccccceeccccccccCCCcccccccccccccccccccccccCCccccCCCCCceeeccCccccccCCccccCCCCCc
Q 001922 110 IGNLSSLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQGLE 189 (995)
Q Consensus 110 ~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 189 (995)
+....+|+.+.+.. .++.+...+|.++.+|+.+++.. .++.+...+|.++ +|+.+.+..+ ++.....+|.. .+|+
T Consensus 42 ~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~-~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~ 116 (379)
T 4h09_A 42 YKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAS-TVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLD 116 (379)
T ss_dssp GGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECT-TCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCS
T ss_pred cccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCC-cceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcc
Confidence 55667888888864 46667788899999999999864 4777777888887 6777777644 44344445554 4788
Q ss_pred eeeccCCcccccCcccccchhhhhhhhccccccccCCCCcccCCCCcccEEECcCCCCCCccCccccCccccCccccccc
Q 001922 190 YLSLAGNDLTGKIPGELGNLTNLREIYLGYYNVFEGGIPREVGKLVNLVHLDLSSCELDGQIPHEIGNLKLLDTVFLHIN 269 (995)
Q Consensus 190 ~L~Ls~N~l~~~~~~~l~~l~~L~~L~L~~n~~~~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~l~~N 269 (995)
.+.+..+ ++......|.+. +|+.+.+.. ++. ..-...+..+.+++...+..+........ .. ..+
T Consensus 117 ~i~lp~~-~~~i~~~~F~~~-~l~~~~~~~-~v~-~i~~~~f~~~~~l~~~~~~~~~~~~~~~~-~~----------~~~ 181 (379)
T 4h09_A 117 DFEFPGA-TTEIGNYIFYNS-SVKRIVIPK-SVT-TIKDGIGYKAENLEKIEVSSNNKNYVAEN-YV----------LYN 181 (379)
T ss_dssp EEECCTT-CCEECTTTTTTC-CCCEEEECT-TCC-EECSCTTTTCTTCCEEEECTTCSSEEEET-TE----------EEE
T ss_pred cccCCCc-cccccccccccc-eeeeeeccc-eee-ccccchhcccccccccccccccceeeccc-ce----------ecc
Confidence 8888765 332334444443 333333321 111 11123455556666665554433211100 00 001
Q ss_pred cccCCCCccccCcCCCCeEeccCCcCcCcCCccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEeccCcccccCCC
Q 001922 270 LLSGSIPKQLGNLTNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLWQNNFTGVIPE 349 (995)
Q Consensus 270 ~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 349 (995)
.. ......+.....+..+.+..+.-. .....+....+|+.+.+..+ +......+|.++.+|+.+.+..+ ++.+...
T Consensus 182 ~~-~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~ 257 (379)
T 4h09_A 182 KN-KTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSF 257 (379)
T ss_dssp TT-SSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTT
T ss_pred cc-cceeccccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCcc
Confidence 11 122334556667777776655433 56677888899999998765 44456678889999999999876 6667788
Q ss_pred cccCCCCCCeEEecCceecccCCCcCcCCCccceeeccccccCCCCCcccccCCCCcEEEecCCccCCCCCCCcccCCCC
Q 001922 350 NLGQNGKLQVLDLSSNKLTGTIPTDLCSSNQLRILILLKNFLFGPIPERLGACYSLTRVRLGQNYLNGSIPDGFIYLPGL 429 (995)
Q Consensus 350 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~l~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 429 (995)
.|..+.+|+.+.+..+ +.......|..+.+|+.+.+.++.+...-...|.+|.+|+.+.+..+ ++.+-..+|.+..+|
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 335 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKAL 335 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCC
Confidence 8999999999999765 55455667899999999999998887777889999999999999865 776777899999999
Q ss_pred ceeeccCc
Q 001922 430 NLAELQSN 437 (995)
Q Consensus 430 ~~l~l~~n 437 (995)
+.+.+..+
T Consensus 336 ~~i~ip~~ 343 (379)
T 4h09_A 336 STISYPKS 343 (379)
T ss_dssp CCCCCCTT
T ss_pred CEEEECCc
Confidence 98887654
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.81 E-value=7.1e-10 Score=122.91 Aligned_cols=59 Identities=24% Similarity=0.333 Sum_probs=30.4
Q ss_pred cCCCCeEeccCCcCcCc----CCccccccCCCCEEEccCCcCCCCCCccccC-CCCcceEEeccCc
Q 001922 282 LTNLVNLDLSNNALTGE----IPYSFINLRQLKLFNLFMNRLHGSIPDYLAD-LPNLETLGLWQNN 342 (995)
Q Consensus 282 l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~L~~N~ 342 (995)
+++|++|+|+.|.|++. ++..+..+++|+.|+|++|.|+...-..+.. + ...+++++|+
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 45666666666666543 2223344566666666666655333222322 2 2446666665
No 412
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.81 E-value=5.6e-11 Score=124.77 Aligned_cols=143 Identities=19% Similarity=0.204 Sum_probs=89.3
Q ss_pred CceeeeEEeCCC--ceeeeecCC---CCccccCCc-cccCCCCCCeEeccCCcccCccc---cCcccccce--ecccccc
Q 001922 57 VCSWAGICCSRD--RVASLDLTD---LNLCGSVPA-QILRLDKLTNLSLAGNNFTGSIE---IGNLSSLQF--LNISNNQ 125 (995)
Q Consensus 57 ~C~w~gv~C~~~--~v~~l~l~~---~~l~~~~~~-~~~~l~~L~~L~L~~n~l~~~~~---~~~l~~L~~--L~Ls~N~ 125 (995)
.|.|.|+.|..+ +|+.+...+ ..+.+.+++ .+..++. .|...+|.-++... +...+.|+. ++++.|+
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~~~~~~~~~~~~l~~~~~~~Lk~--~l~~ryn~~~~~LdLs~l~~dp~L~~~~l~l~~N~ 154 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIINSSAPPHTILNELKPEQVEQLKL--IMSKRYDGSQQALDLKGLRSDPDLVAQNIDVVLNR 154 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEEECCCCHHHHTSCCHHHHHHHHH--HHHHTEETTTTEEECTTGGGCHHHHHTTCCCCTTS
T ss_pred HHhcCcEEECCCCCEEEEEEecCCCcccccccCCHHHHHHHHH--HHHhccchhccccCHHHcCCCcchhhcCccccCCH
Confidence 588999999754 666554443 223333432 2222222 23444455454443 444455665 6777774
Q ss_pred cc---CCCccccccccccccccccccccccc--CCccccCCCCCceeeccCccccccCCccccCCC--CCceeeccCCcc
Q 001922 126 FS---GGLDWNYSSLVNLEVFDAYNNNFTAL--LPVGILKLEKLKYLDLGGNYFFGKIPNSYGELQ--GLEYLSLAGNDL 198 (995)
Q Consensus 126 i~---~~~~~~~~~l~~L~~L~Ls~n~i~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~--~L~~L~Ls~N~l 198 (995)
.. +.......++++|+.|+|++|+|+++ +|..+..+++|++|+|++|+|++. ..+..+. +|++|+|++|.+
T Consensus 155 ~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl 232 (267)
T 3rw6_A 155 RSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSL 232 (267)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTT
T ss_pred HHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcC
Confidence 33 22233335678888888888888883 456777888899999999988754 3344444 888899999988
Q ss_pred cccCc
Q 001922 199 TGKIP 203 (995)
Q Consensus 199 ~~~~~ 203 (995)
.+.+|
T Consensus 233 ~~~~~ 237 (267)
T 3rw6_A 233 CDTFR 237 (267)
T ss_dssp GGGCS
T ss_pred ccccC
Confidence 86555
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.78 E-value=5.3e-10 Score=123.96 Aligned_cols=39 Identities=23% Similarity=0.418 Sum_probs=18.5
Q ss_pred CCCcceEEeccCccccc----CCCcccCCCCCCeEEecCceec
Q 001922 330 LPNLETLGLWQNNFTGV----IPENLGQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 330 l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 368 (995)
+++|++|+|+.|.+++. ++..+..+++|+.|+|++|.|+
T Consensus 278 ~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 278 LPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp GGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 44555555555555432 1222233455555555555554
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.74 E-value=4.5e-09 Score=114.50 Aligned_cols=186 Identities=19% Similarity=0.169 Sum_probs=121.3
Q ss_pred CCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCC--ceeEeEEEecCC---cceEEEEe
Q 001922 691 GNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRN--IVRLLAFCSNKE---TNLLVYEY 764 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpn--iv~~~~~~~~~~---~~~lv~e~ 764 (995)
.+.++.|.+..||++. ..+++|+... ......+.+|+++++.+. +.. +.+.+......+ ..|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~---~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKH---SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESS---HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCC---cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 3568999999999863 4688888632 123567889999998883 322 334444443333 34899999
Q ss_pred ccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 001922 765 MRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC--------------------------------------- 805 (995)
Q Consensus 765 ~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~--------------------------------------- 805 (995)
++|.++.+... ..++...+..++.++++.++.||+..
T Consensus 98 i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (304)
T 3sg8_A 98 IKGVPLTPLLL----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV 173 (304)
T ss_dssp CCCEECCHHHH----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred cCCeECCcccc----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence 99988875432 23567777888889999888888611
Q ss_pred ----------------CCCeEecCCCCCCEEECC--CCCeEEeeeccccccccCCCCcccccc----cc---------Cc
Q 001922 806 ----------------SPLIVHRDVKSNNILLNS--AFEAHVADFGLAKFLIDGGASECMSAI----AG---------SY 854 (995)
Q Consensus 806 ----------------~~~iiHrDlkp~Nill~~--~~~vkl~DfGla~~~~~~~~~~~~~~~----~g---------t~ 854 (995)
...++|+|++|.||++++ ...+.|+||+.+..- +....-..... .+ ..
T Consensus 174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~l~~Y 252 (304)
T 3sg8_A 174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS-DPDNDFISLMEDDEEYGMEFVSKILNHY 252 (304)
T ss_dssp HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE-CTTHHHHTTCCTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC-ChHHHHHHHHhhccccCHHHHHHHHHHc
Confidence 134899999999999998 456789999988642 11110000000 00 00
Q ss_pred cccc-ccccccCCCCcccchhhHHHHHHHHHhCCCCC
Q 001922 855 GYIA-PEYAYTLRVDEKSDVYSFGVVLLELLTGRRPV 890 (995)
Q Consensus 855 ~y~a-PE~~~~~~~~~~~DvwSlGvil~elltg~~Pf 890 (995)
++.. |+.... .....+.|++|.++|.+.+|..+|
T Consensus 253 ~~~~~~~~~~r--~~~~~~~~~l~~~~~~~~~g~~~~ 287 (304)
T 3sg8_A 253 KHKDIPTVLEK--YRMKEKYWSFEKIIYGKEYGYMDW 287 (304)
T ss_dssp TCSCHHHHHHH--HHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred CCCCcHHHHHH--HHHHHHHHHHHHHHHHHHcCCHHH
Confidence 1111 221111 123368999999999999998876
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.41 E-value=1e-08 Score=107.63 Aligned_cols=78 Identities=24% Similarity=0.343 Sum_probs=42.9
Q ss_pred hhhhccccccccccCC--CCCCccCcccccceeeccCCcccCCCcccccccc--ccCeEeccccccccccCc-------c
Q 001922 501 LRQVLKLDLSRNSLSG--EIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVR--ILNYLNLSRNHLNQNIPK-------S 569 (995)
Q Consensus 501 l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~--~L~~L~L~~N~l~~~~p~-------~ 569 (995)
+++|+.|+||+|+|++ .+|..+..+++|+.|+|++|+|++. .++..+. +|++|+|++|++.+.+|. .
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 4455555555555554 3344555566666666666666532 2344444 666666666666655542 2
Q ss_pred cccCCcccEEe
Q 001922 570 IGSMKSLTIAD 580 (995)
Q Consensus 570 ~~~l~~L~~l~ 580 (995)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 45566666665
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.39 E-value=1.3e-06 Score=95.63 Aligned_cols=135 Identities=17% Similarity=0.174 Sum_probs=99.1
Q ss_pred ccCCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCC---C-CceeEeEEEecCCcceEEEE
Q 001922 688 VKDGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRH---R-NIVRLLAFCSNKETNLLVYE 763 (995)
Q Consensus 688 ~~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h---p-niv~~~~~~~~~~~~~lv~e 763 (995)
+...+.++.|....||+. |+.+++|+.. .......+.+|..+++.+.+ + .+.+++++ +..|+|||
T Consensus 39 i~~v~~l~~G~~n~vy~v----g~~~vlR~~~---~~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme 107 (320)
T 3r70_A 39 INELRYLSSGDDSDTFLC----NEQYVVKVPK---RDSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMK 107 (320)
T ss_dssp CSCEEEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEE
T ss_pred eEEEEeCCCCCCceEEEE----CCEEEEEeCC---cHHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEe
Confidence 445567999999999998 6678888762 12224568899999888865 2 23344444 56789999
Q ss_pred eccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCC-------------------------------------
Q 001922 764 YMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCS------------------------------------- 806 (995)
Q Consensus 764 ~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~------------------------------------- 806 (995)
|++|.++.+... ..++......++.+++..++.||+...
T Consensus 108 ~i~G~~l~~~~~----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (320)
T 3r70_A 108 YIKGERITYEQY----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTD 183 (320)
T ss_dssp CCCCBCCCHHHH----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCH
T ss_pred ecCCcccccccc----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccc
Confidence 999988874332 125666677788888888888885431
Q ss_pred -----------------------CCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 807 -----------------------PLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 807 -----------------------~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
..++|+|++|.||+++.+..+.|+||+.+..
T Consensus 184 ~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 184 EMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred cchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2259999999999999866679999999864
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=5.7e-08 Score=97.02 Aligned_cols=116 Identities=10% Similarity=-0.006 Sum_probs=83.9
Q ss_pred CCccccCCCCCCeEeccCC-cccCc--c----ccCcccccceeccccccccCCC----cccccccccccccccccccccc
Q 001922 84 VPAQILRLDKLTNLSLAGN-NFTGS--I----EIGNLSSLQFLNISNNQFSGGL----DWNYSSLVNLEVFDAYNNNFTA 152 (995)
Q Consensus 84 ~~~~~~~l~~L~~L~L~~n-~l~~~--~----~~~~l~~L~~L~Ls~N~i~~~~----~~~~~~l~~L~~L~Ls~n~i~~ 152 (995)
+...+...+.|++|+|++| .+... . .+...++|++|+|++|.|.... ...+...+.|++|+|++|.|..
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 4445667788889999988 88642 1 3566788899999999887532 2334455778888888888876
Q ss_pred c----CCccccCCCCCceeec--cCcccccc----CCccccCCCCCceeeccCCccc
Q 001922 153 L----LPVGILKLEKLKYLDL--GGNYFFGK----IPNSYGELQGLEYLSLAGNDLT 199 (995)
Q Consensus 153 ~----~p~~~~~l~~L~~L~L--~~N~l~~~----~p~~l~~l~~L~~L~Ls~N~l~ 199 (995)
. +...+...+.|++|+| ++|.|+.. +...+...++|++|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3 3456677788999999 78888754 3445556688999999988886
No 418
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=2.5e-08 Score=99.63 Aligned_cols=86 Identities=19% Similarity=0.245 Sum_probs=46.7
Q ss_pred hhhccccccccccCCC----CCCccCcccccceeeccCCcccCC----CccccccccccCeEec--cccccccc----cC
Q 001922 502 RQVLKLDLSRNSLSGE----IPPAIGYCNHLTYLDMSQNNLSGS----IPPEISNVRILNYLNL--SRNHLNQN----IP 567 (995)
Q Consensus 502 ~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----ip~~l~~l~~L~~L~L--~~N~l~~~----~p 567 (995)
++|++|+|++|.|... +...+...++|++|+|++|.|... +...+...+.|++|+| ++|.++.. +.
T Consensus 65 ~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~ 144 (185)
T 1io0_A 65 TYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIA 144 (185)
T ss_dssp CSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHH
T ss_pred CCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHH
Confidence 4455555555554321 222333445666666666666532 3445555566777777 66666543 23
Q ss_pred cccccCCcccEEeccCCCCC
Q 001922 568 KSIGSMKSLTIADFSFNDFS 587 (995)
Q Consensus 568 ~~~~~l~~L~~l~ls~N~l~ 587 (995)
..+...++|+.|+|++|.+.
T Consensus 145 ~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 145 NMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCcCEEeccCCCCC
Confidence 34444566777777776653
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.23 E-value=3.7e-06 Score=90.10 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=59.6
Q ss_pred CCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCC---CceeEeEEEecCCcceEEEEeccC
Q 001922 691 GNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHR---NIVRLLAFCSNKETNLLVYEYMRN 767 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~~~~~~~lv~e~~~~ 767 (995)
.+.+|.|.++.||+++..+|+.++||+.... .......+..|++.++.+++. .+++++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~-~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCC-CcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 4579999999999999888999999986322 222346789999999999765 467777763 46999999999
Q ss_pred CChh
Q 001922 768 GSLG 771 (995)
Q Consensus 768 gsL~ 771 (995)
+++.
T Consensus 95 ~~~~ 98 (288)
T 3d1u_A 95 RPPT 98 (288)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 8753
No 420
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.17 E-value=5.7e-06 Score=88.10 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=96.8
Q ss_pred eeeccCce-EEEEEEeC-CCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEecCCcceEEEEeccCCC
Q 001922 693 VIGRGGAG-IVYHGKMP-NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKETNLLVYEYMRNGS 769 (995)
Q Consensus 693 ~lG~G~~g-~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~e~~~~gs 769 (995)
.+..|..| .||+.... ++..+++|+-. ......+.+|..+++.+. +--+.++++++.+++..|+|||+++|.+
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~----~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGK----GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEE----THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECC----CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 35556665 68988654 46678898863 234566888999998884 3336678888888889999999999988
Q ss_pred hhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 001922 770 LGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC-------------------------------------------- 805 (995)
Q Consensus 770 L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~-------------------------------------------- 805 (995)
+.+..... ......+..+++..+..||...
T Consensus 107 ~~~~~~~~------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 107 AFQVLEEY------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHHC------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred ccccccCC------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 87765321 1223346667777777777510
Q ss_pred -----------CCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 806 -----------SPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 806 -----------~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
...++|+|+.+.||+++..+.+-|+||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 11278999999999999877778999998753
No 421
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.15 E-value=1.1e-05 Score=87.63 Aligned_cols=135 Identities=19% Similarity=0.193 Sum_probs=94.3
Q ss_pred CeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCC---CceeEeEEEe-cCCcceEEEEeccC
Q 001922 692 NVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHR---NIVRLLAFCS-NKETNLLVYEYMRN 767 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp---niv~~~~~~~-~~~~~~lv~e~~~~ 767 (995)
+.++.|....||+. |..+++|+.. .......+..|+++++.+.+. .+.+.+.+.. ..+..|+||||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~---~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPK---SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEES---SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecC---CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 46888999999997 5678888852 222356788999999999642 2456666663 45567899999999
Q ss_pred CChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 001922 768 GSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDC------------------------------------------ 805 (995)
Q Consensus 768 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~------------------------------------------ 805 (995)
.++.+.... .++......++.++++.++.||+..
T Consensus 98 ~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 98 QILGEDGMA----VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp EECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred eECchhhhh----hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 888763211 1344455555666666666665421
Q ss_pred ---------------CCCeEecCCCCCCEEECC---CCCe-EEeeeccccc
Q 001922 806 ---------------SPLIVHRDVKSNNILLNS---AFEA-HVADFGLAKF 837 (995)
Q Consensus 806 ---------------~~~iiHrDlkp~Nill~~---~~~v-kl~DfGla~~ 837 (995)
...++|+|++|.||+++. ++.+ .|+||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 224699999999999987 4554 8999998764
No 422
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.03 E-value=1e-05 Score=89.92 Aligned_cols=81 Identities=5% Similarity=-0.018 Sum_probs=55.5
Q ss_pred Cee-eccCceEEEEEEeC-------CCcEEEEEEecCCC--CCChhHHHHHHHHHHhccC-C--CCceeEeEEEecC---
Q 001922 692 NVI-GRGGAGIVYHGKMP-------NGVEIAVKKLLGFG--THSHDHGFRAEIQTLGNIR-H--RNIVRLLAFCSNK--- 755 (995)
Q Consensus 692 ~~l-G~G~~g~V~~~~~~-------~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~-h--pniv~~~~~~~~~--- 755 (995)
+.| +.|....+|+.... +++.+++|...... .......+..|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998654 26688888753221 0101245788999998884 3 2466778777655
Q ss_pred CcceEEEEeccCCChhh
Q 001922 756 ETNLLVYEYMRNGSLGE 772 (995)
Q Consensus 756 ~~~~lv~e~~~~gsL~~ 772 (995)
+..|+||||++|.++.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999877654
No 423
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.02 E-value=1.7e-05 Score=88.09 Aligned_cols=74 Identities=9% Similarity=0.068 Sum_probs=55.4
Q ss_pred CCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC--ceeEeEEEecC-CcceEEEEeccC
Q 001922 691 GNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN--IVRLLAFCSNK-ETNLLVYEYMRN 767 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~~~~~-~~~~lv~e~~~~ 767 (995)
.+.++.|....+|+.+. +++.+++|.... ...+..|+.+++.+.... +.+++.++.+. +..|+||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~------~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSC------ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESC------CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCc------hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 35688999999999876 578899998732 135888999998886433 45667666554 568999999998
Q ss_pred CChh
Q 001922 768 GSLG 771 (995)
Q Consensus 768 gsL~ 771 (995)
.++.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 7664
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.82 E-value=6.4e-05 Score=84.85 Aligned_cols=75 Identities=19% Similarity=0.204 Sum_probs=49.5
Q ss_pred CeeeccCceEEEEEEeC-CCcEEEEEEecCCCC------CChhHHHHHHHHHHhccCC--CCce-eEeEEEecCCcceEE
Q 001922 692 NVIGRGGAGIVYHGKMP-NGVEIAVKKLLGFGT------HSHDHGFRAEIQTLGNIRH--RNIV-RLLAFCSNKETNLLV 761 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~h--pniv-~~~~~~~~~~~~~lv 761 (995)
+.+|.|.++.||+++.. +++.++||....... ....+++..|.++++.+.. |..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 46899999999999754 468899998643211 1234567789999888742 4434 45543 34567899
Q ss_pred EEeccCC
Q 001922 762 YEYMRNG 768 (995)
Q Consensus 762 ~e~~~~g 768 (995)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.65 E-value=8e-06 Score=79.25 Aligned_cols=34 Identities=9% Similarity=-0.041 Sum_probs=14.2
Q ss_pred ccceeccccccccCCCcccccccccccccccccc
Q 001922 115 SLQFLNISNNQFSGGLDWNYSSLVNLEVFDAYNN 148 (995)
Q Consensus 115 ~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~n 148 (995)
+|++|||+++.|+...-..+.++++|++|+|++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 3555555555544333233333333333333333
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.63 E-value=1.1e-05 Score=78.28 Aligned_cols=84 Identities=13% Similarity=0.071 Sum_probs=55.1
Q ss_pred CCCCeEeccCCcCcCcCCccccccCCCCEEEccCCc-CCCCCCccccCC----CCcceEEeccCc-ccccCCCcccCCCC
Q 001922 283 TNLVNLDLSNNALTGEIPYSFINLRQLKLFNLFMNR-LHGSIPDYLADL----PNLETLGLWQNN-FTGVIPENLGQNGK 356 (995)
Q Consensus 283 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~L~~N~-l~~~~p~~~~~l~~ 356 (995)
.+|+.||++++.|+...-..+.++++|+.|+|++|. |++..-..++.+ ++|++|+|++|. ++...-..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777776655666677777777777774 554433445543 357777777764 66544445666777
Q ss_pred CCeEEecCce
Q 001922 357 LQVLDLSSNK 366 (995)
Q Consensus 357 L~~L~L~~N~ 366 (995)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 7777777764
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.62 E-value=0.00025 Score=78.11 Aligned_cols=138 Identities=15% Similarity=0.203 Sum_probs=79.1
Q ss_pred eeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-----CCCceeEe-E--EEecCCcceEEEEe
Q 001922 693 VIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-----HRNIVRLL-A--FCSNKETNLLVYEY 764 (995)
Q Consensus 693 ~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----hpniv~~~-~--~~~~~~~~~lv~e~ 764 (995)
.++.|..+.||++...+| .+++|+... ....+..|..+++.+. .|.++... + +....+..++||||
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~-----~~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHR-----PEKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECS-----CHHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCC-----CHHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 466678899999987554 589998843 1334555666666553 24443311 1 12235667899999
Q ss_pred ccCCChh--------------hhhcC--C-C--C-------CCCCHHHH-------------------------------
Q 001922 765 MRNGSLG--------------EALHG--K-K--G-------AFLGWNLR------------------------------- 787 (995)
Q Consensus 765 ~~~gsL~--------------~~l~~--~-~--~-------~~~~~~~~------------------------------- 787 (995)
++|.++. ..+|. . . . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 01111 0 0 0 01122211
Q ss_pred HHHHHHHHHHHHHHHh----------cCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 788 YKIAIEAAKGLCYLHH----------DCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 788 ~~i~~qi~~~l~~LH~----------~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..+..++..++.+|++ .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 0111223445666653 013459999999999999888899999999875
No 428
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.59 E-value=0.00025 Score=76.50 Aligned_cols=136 Identities=17% Similarity=0.159 Sum_probs=90.7
Q ss_pred CeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccC---CCCceeEeEEEecCCcceEEEEeccCC
Q 001922 692 NVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR---HRNIVRLLAFCSNKETNLLVYEYMRNG 768 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---hpniv~~~~~~~~~~~~~lv~e~~~~g 768 (995)
+.|+.|....+|+... +++.+++|+... .....+..|+..++.+. ...+++++.+....+..++||||+++.
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~----~~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~ 116 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINER----SYRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKS 116 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEG----GGHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCc----ccHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCC
Confidence 4689999999999976 567899998632 23566889999998884 356778888887778899999999987
Q ss_pred Chhh-----------hhcCCCC--------------------CCCCHHHHH---HHHH----------------HHHHHH
Q 001922 769 SLGE-----------ALHGKKG--------------------AFLGWNLRY---KIAI----------------EAAKGL 798 (995)
Q Consensus 769 sL~~-----------~l~~~~~--------------------~~~~~~~~~---~i~~----------------qi~~~l 798 (995)
.+.. .+|.... ..-+|...+ ++.. +++..+
T Consensus 117 ~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l 196 (312)
T 3jr1_A 117 KNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIV 196 (312)
T ss_dssp CCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 6531 1221111 012454322 1111 111111
Q ss_pred -HHHHh-cCCCCeEecCCCCCCEEECCCCCeEEeeec
Q 001922 799 -CYLHH-DCSPLIVHRDVKSNNILLNSAFEAHVADFG 833 (995)
Q Consensus 799 -~~LH~-~~~~~iiHrDlkp~Nill~~~~~vkl~DfG 833 (995)
..|.. ...+.++|+|+.+.|++++.++ +.|.|++
T Consensus 197 ~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 197 ADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 1245699999999999999887 8899974
No 429
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.34 E-value=0.00056 Score=73.18 Aligned_cols=76 Identities=18% Similarity=0.185 Sum_probs=54.5
Q ss_pred CCCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCC--C-CceeEeEEEecCCcceEEEEecc
Q 001922 690 DGNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRH--R-NIVRLLAFCSNKETNLLVYEYMR 766 (995)
Q Consensus 690 ~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h--p-niv~~~~~~~~~~~~~lv~e~~~ 766 (995)
..+.+|.|..+.||+.+..||+.|++|+.... .......|..|+..++.+.- + -+.+++++. ..++||||++
T Consensus 19 ~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~-~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~ 93 (288)
T 3f7w_A 19 AVAERGHSHRWHLYRVELADGTPLFVKALPDD-APALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEETTEEEEEEEETTSCEEEEEECCTT-CCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred EEEecCCCCCeEEEEEEECCCCEEEEEEeCCC-CcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeec
Confidence 34568999999999999999999999986332 23334567889999988842 1 234445442 3489999998
Q ss_pred CCCh
Q 001922 767 NGSL 770 (995)
Q Consensus 767 ~gsL 770 (995)
++..
T Consensus 94 ~~~~ 97 (288)
T 3f7w_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred ccCC
Confidence 7654
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.27 E-value=0.0011 Score=75.12 Aligned_cols=79 Identities=13% Similarity=0.062 Sum_probs=47.1
Q ss_pred CCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccC---CCCcccchhhHHHHHHH
Q 001922 806 SPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTL---RVDEKSDVYSFGVVLLE 882 (995)
Q Consensus 806 ~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwSlGvil~e 882 (995)
...++|||++|.|||++.++ ++++||+.+..-.+ ...-......-...|.+|+..... .-....++......+|+
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p-~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPM-GFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWN 308 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEEECH-HHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCcccccCch-HHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHH
Confidence 34599999999999999876 99999998874211 100000000012346666654321 11223455577777787
Q ss_pred HHhC
Q 001922 883 LLTG 886 (995)
Q Consensus 883 lltg 886 (995)
.+++
T Consensus 309 ~y~~ 312 (420)
T 2pyw_A 309 LFNK 312 (420)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.99 E-value=9e-05 Score=73.26 Aligned_cols=112 Identities=11% Similarity=0.059 Sum_probs=72.3
Q ss_pred ccCCCCCCeEeccCC-cccCc--c----ccCcccccceeccccccccCCCcc----ccccccccccccccccccccc---
Q 001922 88 ILRLDKLTNLSLAGN-NFTGS--I----EIGNLSSLQFLNISNNQFSGGLDW----NYSSLVNLEVFDAYNNNFTAL--- 153 (995)
Q Consensus 88 ~~~l~~L~~L~L~~n-~l~~~--~----~~~~l~~L~~L~Ls~N~i~~~~~~----~~~~l~~L~~L~Ls~n~i~~~--- 153 (995)
+.+-+.|++|+|++| +|... . .+..-+.|+.|+|++|+|...... .+..-+.|++|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345567888888885 77531 1 355667888888888888744333 333456778888888887653
Q ss_pred -CCccccCCCCCceeeccCc---cccc----cCCccccCCCCCceeeccCCccc
Q 001922 154 -LPVGILKLEKLKYLDLGGN---YFFG----KIPNSYGELQGLEYLSLAGNDLT 199 (995)
Q Consensus 154 -~p~~~~~l~~L~~L~L~~N---~l~~----~~p~~l~~l~~L~~L~Ls~N~l~ 199 (995)
+-.++..-+.|++|+|++| .+.. .+...+..-+.|+.|+++.|.+.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 2234455567888888755 3332 23445556677888888877654
No 432
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.81 E-value=0.00017 Score=71.24 Aligned_cols=92 Identities=12% Similarity=0.081 Sum_probs=51.5
Q ss_pred ccccCcCCCCeEeccCCcCcCcCCc----cccccCCCCEEEccCCcCCCC----CCccccCCCCcceEEeccC---cccc
Q 001922 277 KQLGNLTNLVNLDLSNNALTGEIPY----SFINLRQLKLFNLFMNRLHGS----IPDYLADLPNLETLGLWQN---NFTG 345 (995)
Q Consensus 277 ~~l~~l~~L~~L~Ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N---~l~~ 345 (995)
+++..-+.|+.|+|++|.|.+.... .+..-+.|+.|+|++|.|... +-+.+..-+.|++|+|++| .+..
T Consensus 64 ~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~ 143 (197)
T 1pgv_A 64 EAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGN 143 (197)
T ss_dssp HHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCH
T ss_pred HHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCH
Confidence 3444556666777777766643322 233446677777777776643 2233444556777777654 3332
Q ss_pred ----cCCCcccCCCCCCeEEecCceec
Q 001922 346 ----VIPENLGQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 346 ----~~p~~~~~l~~L~~L~L~~N~l~ 368 (995)
.+...+...+.|+.|+++.|.+.
T Consensus 144 ~g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 144 QVEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 12334555667777777766543
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.79 E-value=0.0036 Score=69.27 Aligned_cols=140 Identities=14% Similarity=0.169 Sum_probs=83.4
Q ss_pred CeeeccCceEEEEEEeC--------CCcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEecCCcceEEE
Q 001922 692 NVIGRGGAGIVYHGKMP--------NGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.+..|-...+|++... +++.+++|+.-. .......+.+|..+++.+. +.-..++++++.+ .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--ILQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--ccchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45677888999999864 257889988522 1223556778999998884 3334566776654 2899
Q ss_pred EeccCCChhhh-----------------hcCCC---CCCCC--HHHHHHHHHHHHH-------------------HHHHH
Q 001922 763 EYMRNGSLGEA-----------------LHGKK---GAFLG--WNLRYKIAIEAAK-------------------GLCYL 801 (995)
Q Consensus 763 e~~~~gsL~~~-----------------l~~~~---~~~~~--~~~~~~i~~qi~~-------------------~l~~L 801 (995)
||++|.++... +|... +.... +.+..++..++.. .+..|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 99998665421 11111 11122 3444455544321 22333
Q ss_pred ----HhcC-CCCeEecCCCCCCEEECCC----CCeEEeeeccccc
Q 001922 802 ----HHDC-SPLIVHRDVKSNNILLNSA----FEAHVADFGLAKF 837 (995)
Q Consensus 802 ----H~~~-~~~iiHrDlkp~Nill~~~----~~vkl~DfGla~~ 837 (995)
.... ...++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2221 2348999999999999876 7899999998764
No 434
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=96.76 E-value=0.0022 Score=70.09 Aligned_cols=139 Identities=15% Similarity=0.122 Sum_probs=71.4
Q ss_pred eeeccCceE-EEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCC--CceeEeEEEecCCcceEEEEeccCCC
Q 001922 693 VIGRGGAGI-VYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHR--NIVRLLAFCSNKETNLLVYEYMRNGS 769 (995)
Q Consensus 693 ~lG~G~~g~-V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp--niv~~~~~~~~~~~~~lv~e~~~~gs 769 (995)
.++.|+... +|+....+++.+++|...... .+.+..|+.+++.+... .+.+++.+..+ .-+++||++.+..
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~----~~~~~~e~~~l~~L~~~g~~vP~v~~~d~~--~g~ll~e~l~~~~ 98 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEE----GGDTQPFVDLAQYLRNLDISAPEIYAEEHA--RGLLLIEDLGDAL 98 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTT----TCCSHHHHHHHHHHHHTTCBCCCEEEEETT--TTEEEECCCCSCB
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCC----CccccHHHHHHHHHHhCCCCCCceeeecCC--CCEEEEeeCCCcc
Confidence 455565554 677765447778777643221 12345677777776422 24456655332 2378999997766
Q ss_pred hhhhhcC---------------------CCC---CCCCHHHHH-------HH-------------HHHHHHHHHHHH---
Q 001922 770 LGEALHG---------------------KKG---AFLGWNLRY-------KI-------------AIEAAKGLCYLH--- 802 (995)
Q Consensus 770 L~~~l~~---------------------~~~---~~~~~~~~~-------~i-------------~~qi~~~l~~LH--- 802 (995)
+.+.+.. ... ...+..... .+ ...+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 6443321 000 111211100 00 001112222221
Q ss_pred hcCCCCeEecCCCCCCEEECCC----CCeEEeeeccccc
Q 001922 803 HDCSPLIVHRDVKSNNILLNSA----FEAHVADFGLAKF 837 (995)
Q Consensus 803 ~~~~~~iiHrDlkp~Nill~~~----~~vkl~DfGla~~ 837 (995)
......++|||+.+.|||++.+ +.+.|+||+.+..
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 1123459999999999999875 6789999998864
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.76 E-value=0.0038 Score=70.74 Aligned_cols=72 Identities=14% Similarity=0.195 Sum_probs=49.7
Q ss_pred CeeeccCceEEEEEEeCC--------CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC-ceeEeEEEecCCcceEEE
Q 001922 692 NVIGRGGAGIVYHGKMPN--------GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN-IVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lv~ 762 (995)
+.|+.|....||++...+ ++.+++|+.... ...+.+..|..+++.+...+ ..++++.+.+ .+||
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 457889999999998653 578999987321 11245668999998885333 3566666543 3899
Q ss_pred EeccCCCh
Q 001922 763 EYMRNGSL 770 (995)
Q Consensus 763 e~~~~gsL 770 (995)
||++|.++
T Consensus 152 e~l~G~~l 159 (429)
T 1nw1_A 152 EYIPSRPL 159 (429)
T ss_dssp CCCCEEEC
T ss_pred EEeCCccc
Confidence 99987554
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.76 E-value=0.0048 Score=66.34 Aligned_cols=71 Identities=10% Similarity=0.066 Sum_probs=45.1
Q ss_pred CCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCc-eeEeEEEecCCcceEEEEec-cCC
Q 001922 691 GNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNI-VRLLAFCSNKETNLLVYEYM-RNG 768 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lv~e~~-~~g 768 (995)
.+.++.|....+|++ +.+++|+....... .....+|+.+++.+....+ .+++++ +.+..++|+||+ +|.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 567899999999998 56888887432111 1123568888877743233 345544 344558999999 665
Q ss_pred Ch
Q 001922 769 SL 770 (995)
Q Consensus 769 sL 770 (995)
++
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 437
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.75 E-value=0.0018 Score=70.40 Aligned_cols=142 Identities=13% Similarity=0.127 Sum_probs=78.4
Q ss_pred CeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC--ceeEeEE------EecCCcceEEEE
Q 001922 692 NVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN--IVRLLAF------CSNKETNLLVYE 763 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~------~~~~~~~~lv~e 763 (995)
+.++.|....+|+....+| .+++|..... ...+.+..|+.+++.+.... +.+++.. ....+..+++|+
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~---~~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKR---VEKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALIS 103 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEE
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCC---CCHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEE
Confidence 3467788899999987655 6889987432 12344667888877774212 2222211 122355689999
Q ss_pred eccCCChhh--------------hhcCC----CCC---CC---CHHHHHH------------HHHHHHHHHHHHHhc---
Q 001922 764 YMRNGSLGE--------------ALHGK----KGA---FL---GWNLRYK------------IAIEAAKGLCYLHHD--- 804 (995)
Q Consensus 764 ~~~~gsL~~--------------~l~~~----~~~---~~---~~~~~~~------------i~~qi~~~l~~LH~~--- 804 (995)
|++|..+.. .+|.. ... .. .|...+. +...+...+.++++.
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 999865421 01110 000 01 1221100 001234445555532
Q ss_pred -CCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 805 -CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 805 -~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
....++|+|+.+.||+++.++.+.|+||+.+..
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 123499999999999999876668999997753
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.49 E-value=0.016 Score=65.85 Aligned_cols=73 Identities=16% Similarity=0.122 Sum_probs=47.1
Q ss_pred CeeeccCceEEEEEEeCC-CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCc-eeEeEEEecCCcceEEEEeccCCC
Q 001922 692 NVIGRGGAGIVYHGKMPN-GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNI-VRLLAFCSNKETNLLVYEYMRNGS 769 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpni-v~~~~~~~~~~~~~lv~e~~~~gs 769 (995)
+.|+.|-...+|++...+ +..+++|+..... .. ......|..+++.+...++ .++++++.. .+||||++|.+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~-~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKT-DE-IINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-C-CS-CSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCCh-hh-hcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 468889999999998765 4788888763321 11 1112578888888864444 566776632 35999998755
Q ss_pred h
Q 001922 770 L 770 (995)
Q Consensus 770 L 770 (995)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 5
No 439
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.43 E-value=0.011 Score=64.16 Aligned_cols=140 Identities=15% Similarity=0.117 Sum_probs=80.5
Q ss_pred eeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC--ceeEeEE-----EecCCcceEEEEec
Q 001922 693 VIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN--IVRLLAF-----CSNKETNLLVYEYM 765 (995)
Q Consensus 693 ~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn--iv~~~~~-----~~~~~~~~lv~e~~ 765 (995)
.++ |....||++...+|+.+++|...... .....+..|..+++.+.... +++++.. ....+..++||+|+
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i 109 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSV 109 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEec
Confidence 466 88889999887778789999984321 23556777888888774222 3333332 12234557899999
Q ss_pred cCCChhh----h----------hcC----CC---CCCCCHHHH----HHH---------------HHHHHHHHHHHHhc-
Q 001922 766 RNGSLGE----A----------LHG----KK---GAFLGWNLR----YKI---------------AIEAAKGLCYLHHD- 804 (995)
Q Consensus 766 ~~gsL~~----~----------l~~----~~---~~~~~~~~~----~~i---------------~~qi~~~l~~LH~~- 804 (995)
+|.++.. . +|. .. ....++... ..+ ...+...+..+.+.
T Consensus 110 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 189 (328)
T 1zyl_A 110 GGRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHW 189 (328)
T ss_dssp CCEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 8755421 0 110 00 011222111 001 11111222233221
Q ss_pred ---CCCCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 805 ---CSPLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 805 ---~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
....++|||+++.||+++ + .+.++||+.+..
T Consensus 190 ~~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 190 REDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hhcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 133488999999999999 4 899999998753
No 440
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.38 E-value=0.0032 Score=58.04 Aligned_cols=55 Identities=25% Similarity=0.315 Sum_probs=27.3
Q ss_pred cccccccccC-CCCCCccCcccccceeeccCCcccCCCccccccccccCeEecccccc
Q 001922 506 KLDLSRNSLS-GEIPPAIGYCNHLTYLDMSQNNLSGSIPPEISNVRILNYLNLSRNHL 562 (995)
Q Consensus 506 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~ip~~l~~l~~L~~L~L~~N~l 562 (995)
.++.+++.|+ ..+|..+. ++|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 4445555553 23443321 2455556666666533334455555555555555555
No 441
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.07 E-value=0.009 Score=54.98 Aligned_cols=37 Identities=27% Similarity=0.253 Sum_probs=19.6
Q ss_pred CcceEEeccCcccccCCCcccCCCCCCeEEecCceec
Q 001922 332 NLETLGLWQNNFTGVIPENLGQNGKLQVLDLSSNKLT 368 (995)
Q Consensus 332 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 368 (995)
+|+.|+|++|+|+.+.+..|..+++|++|+|++|.+.
T Consensus 32 ~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 3555555555555444444555555555555555543
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.07 E-value=0.019 Score=62.79 Aligned_cols=31 Identities=16% Similarity=0.359 Sum_probs=27.4
Q ss_pred CCeEecCCCCCCEEECCCCCeEEeeeccccc
Q 001922 807 PLIVHRDVKSNNILLNSAFEAHVADFGLAKF 837 (995)
Q Consensus 807 ~~iiHrDlkp~Nill~~~~~vkl~DfGla~~ 837 (995)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4499999999999999888899999987764
No 443
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.04 E-value=0.01 Score=65.77 Aligned_cols=73 Identities=10% Similarity=0.051 Sum_probs=43.4
Q ss_pred CeeeccCceEEEEEEeCC---------CcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCC-ceeEeEEEecCCcceEE
Q 001922 692 NVIGRGGAGIVYHGKMPN---------GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRN-IVRLLAFCSNKETNLLV 761 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpn-iv~~~~~~~~~~~~~lv 761 (995)
+.++.|....+|++...+ ++.+++|+..... ........|..+++.+...+ +.++++.+. .++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~~~~~E~~~l~~L~~~g~~P~~~~~~~----~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHV--DELYNTISEFEVYKTMSKYKIAPQLLNTFN----GGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTG--GGTSCHHHHHHHHHHHHHTTSSCCEEEEET----TEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCc--cceecHHHHHHHHHHHHhcCCCCceEEecC----CcEE
Confidence 357788889999997654 2678888763211 11112467888888875333 345665442 3789
Q ss_pred EEeccCCCh
Q 001922 762 YEYMRNGSL 770 (995)
Q Consensus 762 ~e~~~~gsL 770 (995)
|||++|.++
T Consensus 113 ~e~i~G~~l 121 (369)
T 3c5i_A 113 EEWLYGDPL 121 (369)
T ss_dssp EECCCSEEC
T ss_pred EEEecCCcC
Confidence 999987654
No 444
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=95.69 E-value=0.02 Score=56.73 Aligned_cols=103 Identities=17% Similarity=0.103 Sum_probs=66.4
Q ss_pred CChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeeccccccccCCCCccc
Q 001922 768 GSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAKFLIDGGASECM 847 (995)
Q Consensus 768 gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~~~~~~~~~~~~ 847 (995)
-+|.+++. ..+.+++++++|.++.|.+.+|.-.-... .+ ..+=+.|..|++..+|.|...+ +.+.
T Consensus 33 vSL~eIL~-~~~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~----------- 97 (229)
T 2yle_A 33 LSLEEILR-LYNQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADD----------- 97 (229)
T ss_dssp EEHHHHHH-HHTSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C--------------
T ss_pred ccHHHHHH-HcCCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-cccc-----------
Confidence 37888887 45678999999999999999987762211 01 1222356889999999888763 1110
Q ss_pred cccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCC
Q 001922 848 SAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRP 889 (995)
Q Consensus 848 ~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~P 889 (995)
.....+.|||... ...+.+.=|||+|+++|.-+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 1123466888653 3456788999999999999874443
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=95.59 E-value=0.039 Score=61.21 Aligned_cols=142 Identities=15% Similarity=0.218 Sum_probs=82.8
Q ss_pred CeeeccCceEEEEEEeCC--------CcEEEEEEecCCCC----------CChh-------HHHHHHHHHHhccC-CCCc
Q 001922 692 NVIGRGGAGIVYHGKMPN--------GVEIAVKKLLGFGT----------HSHD-------HGFRAEIQTLGNIR-HRNI 745 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~----------~~~~-------~~~~~E~~~l~~l~-hpni 745 (995)
+.+..|-...+|++..++ ++.|+++..-.... ..++ +....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 356678889999997753 36788887632211 0111 12335888888884 4445
Q ss_pred eeEeEEEecCCcceEEEEeccCCChhhh-----------------hcCCC---CCCCC--HHHHHHHHHHHH--------
Q 001922 746 VRLLAFCSNKETNLLVYEYMRNGSLGEA-----------------LHGKK---GAFLG--WNLRYKIAIEAA-------- 795 (995)
Q Consensus 746 v~~~~~~~~~~~~~lv~e~~~~gsL~~~-----------------l~~~~---~~~~~--~~~~~~i~~qi~-------- 795 (995)
.++++++.++ +|+||++|.+|..- +|... ..... +....++..++.
T Consensus 138 Pkl~~~~~~G----~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQG----RLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETTE----EEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCCC----eEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 6677776532 89999997655321 01110 11122 223333433321
Q ss_pred --------------HHH----HHHHhcC-CCCeEecCCCCCCEEECCC------CCeEEeeeccccc
Q 001922 796 --------------KGL----CYLHHDC-SPLIVHRDVKSNNILLNSA------FEAHVADFGLAKF 837 (995)
Q Consensus 796 --------------~~l----~~LH~~~-~~~iiHrDlkp~Nill~~~------~~vkl~DfGla~~ 837 (995)
..+ .++...+ ...++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 112 2233221 2348899999999999876 7899999998763
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=94.22 E-value=0.18 Score=56.34 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=47.9
Q ss_pred CeeeccCceEEEEEEeCC--------CcEEEEEEecCCCCCChhHHHHHHHHHHhccC-CCCceeEeEEEecCCcceEEE
Q 001922 692 NVIGRGGAGIVYHGKMPN--------GVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIR-HRNIVRLLAFCSNKETNLLVY 762 (995)
Q Consensus 692 ~~lG~G~~g~V~~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-hpniv~~~~~~~~~~~~~lv~ 762 (995)
+.+..|-...+|+....+ ++.+++++.... .. ......+|..+++.+. +.-..++++.+. .++||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-t~-~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-VG-KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-C--CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-cc-hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 457778899999998753 578888886322 11 1122457888888884 333445555442 37899
Q ss_pred EeccCCCh
Q 001922 763 EYMRNGSL 770 (995)
Q Consensus 763 e~~~~gsL 770 (995)
||++|.++
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998664
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.99 E-value=1.5 Score=48.68 Aligned_cols=29 Identities=28% Similarity=0.517 Sum_probs=24.9
Q ss_pred eEecCCCCCCEEE------CCCCCeEEeeeccccc
Q 001922 809 IVHRDVKSNNILL------NSAFEAHVADFGLAKF 837 (995)
Q Consensus 809 iiHrDlkp~Nill------~~~~~vkl~DfGla~~ 837 (995)
++|+|+.+.||++ +++..++++||-+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998864
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=64.39 E-value=0.68 Score=52.49 Aligned_cols=61 Identities=7% Similarity=-0.076 Sum_probs=17.3
Q ss_pred CCCeeeccCceEEEEEEeCC-CcEEEE------EEecCCCC-CChhHHHHHHHHHHhccCCCCceeEeEEEe
Q 001922 690 DGNVIGRGGAGIVYHGKMPN-GVEIAV------KKLLGFGT-HSHDHGFRAEIQTLGNIRHRNIVRLLAFCS 753 (995)
Q Consensus 690 ~~~~lG~G~~g~V~~~~~~~-~~~vav------K~~~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~ 753 (995)
..+.+| ||.||+|.+.. ..+||| |+.+.... ......+.+|..+++..+|||+++.+++..
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 345566 99999998743 357888 66543221 222345778889999999999999988753
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=57.00 E-value=18 Score=35.64 Aligned_cols=115 Identities=6% Similarity=0.076 Sum_probs=76.9
Q ss_pred CCCCceeEeEEEecCCcceEEEEecc-CCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCE
Q 001922 741 RHRNIVRLLAFCSNKETNLLVYEYMR-NGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNI 819 (995)
Q Consensus 741 ~hpniv~~~~~~~~~~~~~lv~e~~~-~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~~iiHrDlkp~Ni 819 (995)
.||+.++. .+-.+.+.+.+.++.-+ +-++.. ++ ..+...+++++.+|+....+++. =+|--+.|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~-ik-----~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDN-IK-----SFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGG-GG-----GSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHH-HH-----hcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 58888866 45556666666666543 223333 32 36788899999999988855552 37888999999
Q ss_pred EECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 001922 820 LLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVG 891 (995)
Q Consensus 820 ll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 891 (995)
+++.++.+++.=.|+...+ +|. ..++..=.-.+=+++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~l-------------------~P~-----~~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNVV-------------------DPL-----PVSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTTB-------------------SCC-----CCCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccCC-------------------CCC-----CCCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999866653322 222 11121223346778899999999884
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=55.98 E-value=27 Score=34.56 Aligned_cols=115 Identities=16% Similarity=0.088 Sum_probs=74.9
Q ss_pred CCCCceeEeEEEecCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCCCCE
Q 001922 741 RHRNIVRLLAFCSNKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEAAKGLC-YLHHDCSPLIVHRDVKSNNI 819 (995)
Q Consensus 741 ~hpniv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~-~LH~~~~~~iiHrDlkp~Ni 819 (995)
.||+. -..+-.+.+.+.+.++.-+++-=...++ ..+...+++++.+|+.... +++. -+|--+.|+|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~-----~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR-----KTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH-----TSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH-----hcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCceE
Confidence 57888 4444466677777777654433333342 3678888888888877666 4442 47888999999
Q ss_pred EECCCCCeEEeeeccccccccCCCCccccccccCcccccccccccCCCCcccchhhHHHHHHHHHhCCCCCC
Q 001922 820 LLNSAFEAHVADFGLAKFLIDGGASECMSAIAGSYGYIAPEYAYTLRVDEKSDVYSFGVVLLELLTGRRPVG 891 (995)
Q Consensus 820 ll~~~~~vkl~DfGla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwSlGvil~elltg~~Pf~ 891 (995)
+++.++.+++.=.|+-..+ +|.- .++.-=.-.+=+++..++.++..|+
T Consensus 116 ~f~~~~~p~i~hRGi~~~l-------------------pP~e-----~~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESL-------------------PPDE-----WDDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EECTTCCEEESCCEETTTB-------------------SSCS-----CCHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEeCCCcEEEEEcCCcccC-------------------CCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999999866653322 2321 1111122346678888888888874
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=43.10 E-value=37 Score=28.85 Aligned_cols=45 Identities=16% Similarity=0.017 Sum_probs=23.4
Q ss_pred cCCCcccccccccccccccccccccccCCccccCCCCCceeeccCc
Q 001922 127 SGGLDWNYSSLVNLEVFDAYNNNFTALLPVGILKLEKLKYLDLGGN 172 (995)
Q Consensus 127 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~p~~~~~l~~L~~L~L~~N 172 (995)
+.+...+|.++.+|+.+.+-.+ ++.+...+|.++.+|+.+.+.+.
T Consensus 9 t~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 9 VGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCS
T ss_pred CEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCC
Confidence 3344444555555555554432 44444556666666666666543
No 452
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=40.18 E-value=56 Score=34.44 Aligned_cols=137 Identities=13% Similarity=0.113 Sum_probs=71.1
Q ss_pred CCeeeccCceEEEEEEeCCCcEEEEEEecCCCCCChhHHHHHHHHHHhccCCCCceeEeEE-------------Ee----
Q 001922 691 GNVIGRGGAGIVYHGKMPNGVEIAVKKLLGFGTHSHDHGFRAEIQTLGNIRHRNIVRLLAF-------------CS---- 753 (995)
Q Consensus 691 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~-------------~~---- 753 (995)
.+..-.|..|.++... ++..|+||-. .....+.+-.++...-.+..|...-+... +.
T Consensus 74 I~~s~~Gstgvff~~t--d~~~~VVK~s----~~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~ 147 (342)
T 1cja_A 74 IERSEKGTEGLFFVET--ESGVFIVKRS----TNIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFR 147 (342)
T ss_dssp EEECCSTTSCEEEEEE--SSCEEEEECC----TTHHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSC
T ss_pred EEeccCCCCCeEEEEe--CCCEEEEeCc----HHHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhH
Confidence 3444556555444444 5778999943 22233445555555555566653322211 00
Q ss_pred -----cCCcceEEEEeccCCChhhhhcCCCCCCCCHHHHHHHHHHH--HHHHHHHHhcCCC-CeEe-cCCCCCCEEECCC
Q 001922 754 -----NKETNLLVYEYMRNGSLGEALHGKKGAFLGWNLRYKIAIEA--AKGLCYLHHDCSP-LIVH-RDVKSNNILLNSA 824 (995)
Q Consensus 754 -----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi--~~~l~~LH~~~~~-~iiH-rDlkp~Nill~~~ 824 (995)
.....+++|+|++|..|...-.......+... .+.++ +-++.++...+.+ +.+. .--.+.|||++++
T Consensus 148 ~l~~l~~~~~~l~meyv~G~~L~e~~~~~~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~ 223 (342)
T 1cja_A 148 VITTLANQANILLMELVRGITLNKLTTTSAPEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSER 223 (342)
T ss_dssp HHHHHTTCSEEEEEECCCEEESTTCCSSSHHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESB
T ss_pred HHHHhhcccceehhhhcCCCccccchhhhhhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCC
Confidence 01234699999997776654321111122222 23333 2344555544422 2221 1247899999775
Q ss_pred CC-eEEeeeccccc
Q 001922 825 FE-AHVADFGLAKF 837 (995)
Q Consensus 825 ~~-vkl~DfGla~~ 837 (995)
+. +.++|-+.+..
T Consensus 224 n~~~~~IDhn~af~ 237 (342)
T 1cja_A 224 GATVVPIDSKIIPL 237 (342)
T ss_dssp TTCEEECSCCCCCC
T ss_pred CCeEEEEcCCcccc
Confidence 54 88999998853
No 453
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=32.71 E-value=1.3e+02 Score=25.36 Aligned_cols=38 Identities=16% Similarity=0.049 Sum_probs=15.6
Q ss_pred ccccccCCCCEEEccCCcCCCCCCccccCCCCcceEEec
Q 001922 301 YSFINLRQLKLFNLFMNRLHGSIPDYLADLPNLETLGLW 339 (995)
Q Consensus 301 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 339 (995)
.+|.++++|+.+.+-.+ ++.+...+|.++.+|+.+.+.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444332 222333444444444444443
No 454
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=23.33 E-value=18 Score=20.39 Aligned_cols=9 Identities=44% Similarity=1.265 Sum_probs=7.0
Q ss_pred CCceeeeEE
Q 001922 56 SVCSWAGIC 64 (995)
Q Consensus 56 ~~C~w~gv~ 64 (995)
..|+|+|..
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 369999964
No 455
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=21.26 E-value=1e+03 Score=27.74 Aligned_cols=45 Identities=22% Similarity=0.191 Sum_probs=32.2
Q ss_pred HHHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 785 NLRYKIAIEAA--KGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 785 ~~~~~i~~qi~--~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
..+..+++.+| ..+.|+=.- +|=.++|||++..|.+.=+|||.+-
T Consensus 529 ~ar~nF~~SlA~~Svv~YILGl-------GDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLGV-------GDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-------CCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHccC-------CCCCCcceEEeCCCCEEEEeehhhh
Confidence 34445555443 345555533 4889999999999999999999864
No 456
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=21.14 E-value=5.4e+02 Score=29.56 Aligned_cols=46 Identities=20% Similarity=0.156 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHH--HHHHHHHhcCCCCeEecCCCCCCEEECCCCCeEEeeecccc
Q 001922 784 WNLRYKIAIEAA--KGLCYLHHDCSPLIVHRDVKSNNILLNSAFEAHVADFGLAK 836 (995)
Q Consensus 784 ~~~~~~i~~qi~--~~l~~LH~~~~~~iiHrDlkp~Nill~~~~~vkl~DfGla~ 836 (995)
+..+..+++..| ..+.|+=.- +|=.++|||++.+|.+.=+|||.+-
T Consensus 454 ~~a~~nF~~S~A~ySvv~YILGi-------gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 454 AEVMDTYVKSCAGYCVITYILGV-------GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-------CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred HHHHHHHHHHHHHHhHhheeeec-------cCCCCcceeEcCCCCEeeeehHHhh
Confidence 445555555543 345666543 3778999999999999999999874
Done!