BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001926
(995 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LL04|CPL3_ARATH RNA polymerase II C-terminal domain phosphatase-like 3 OS=Arabidopsis
thaliana GN=CPL3 PE=1 SV=2
Length = 1241
Score = 900 bits (2325), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/1045 (51%), Positives = 662/1045 (63%), Gaps = 111/1045 (10%)
Query: 1 MNHVLKEQNKEILSRLLSLIKSHEPPLFSSNQIKEMEAMLSSLVTRANDKEKDMLAMHGV 60
MN++ KE+NKE +SRLL+L+ H S NQ E+E M D + +A+
Sbjct: 258 MNNISKERNKETMSRLLTLVNDHFSQFLSFNQKNEIETM-------NQDLSRSAIAVFAG 310
Query: 61 NGKDSNIVTENAVNDLNFKEKVPLPVDSLMQNK-PLEASKPGPPGYRSRGVLLPLLDPHK 119
+ N VN + P DS + K E++ G RSR +LPLLD HK
Sbjct: 311 TSSEEN------VNQMT----QPSNGDSFLAKKLTSESTHRGAAYLRSRLPMLPLLDLHK 360
Query: 120 VHDVDSLPSPTRETTPSVPVQRALVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAF 179
HD DSLPSPTRETTPS+PV MV+ + S E K YE+DA +A
Sbjct: 361 DHDADSLPSPTRETTPSLPVNGR----HTMVRPGFPVGRESQTTEGAKVYSYESDARKAV 416
Query: 180 SSYQQKFGRNSFFMNSELPSPTPSEESGDGDGDTGGEISSATAV------------DQPK 227
S+YQQKFG NS F +LPSPTPS E DG+GD GGE+SS+ D P
Sbjct: 417 STYQQKFGLNSVFKTDDLPSPTPSGEPNDGNGDVGGEVSSSVVKSSNPGSHLIYGQDVPL 476
Query: 228 PVNMPTLGQQPVSSQPMDISQPMDISSVQALTTANNSAPASSGYNPVVKPNPVVKAPIKS 287
P N + PV++ P +S + A+ SAP +S + VK KS
Sbjct: 477 PSNFNSRSM-PVANSVSSTVPPHHLS-IHAI-----SAPTAS--------DQTVKPSAKS 521
Query: 288 RDPRLRFASSNALNLN--HQPAPILHNAPKVEPVGRVMSSRKQKTVEEPVLDGPALKRQR 345
RDPRLR A +A N+ + N KVE +++ RKQK +E ++DGPA KRQ+
Sbjct: 522 RDPRLRLAKPDAANVTIYSYSSGDARNLSKVELSADLVNPRKQKAADEFLIDGPAWKRQK 581
Query: 346 NGFENSGVVRDEKNIYGSGGWLEDTDMFEPQIMNRNLLVDSAESNSRKLDNGATSPITSG 405
+ D G+GGWLEDT+ + LL ES R ++NG TS +S
Sbjct: 582 SD-------TDAPKAAGTGGWLEDTE-------SSGLL--KLESKPRLIENGVTSMTSSV 625
Query: 406 TPNVVVSGNEPAPATTPSTTVSLPALLKDIAVNPTMLLNILKMGQQQKLAADAQQKSNDS 465
P VS ++ T + T SL +LLKDIAVNPTMLLN+LKMG++QK+ A QK D
Sbjct: 626 MPTSAVSVSQKV-RTASTDTASLQSLLKDIAVNPTMLLNLLKMGERQKVPEKAIQKPMDP 684
Query: 466 SMNTMHPPIPSSIPPVSVTCSIP-----------SGIL-----SKPMDELGKVRMKPRDP 509
P S P VS SIP SG+L + P E G +RMKPRDP
Sbjct: 685 R-RAAQLPGSSVQPGVSTPLSIPASNALAANSLNSGVLQDSSQNAPAAESGSIRMKPRDP 743
Query: 510 RRVLHGNALQRS-GSLGPEFKTDGPSAPCT---QGSKENLNFQKQLGAPE-------AKP 558
RR+LHG+ LQR+ S+ + K + PS T +G E+L QL + +K
Sbjct: 744 RRILHGSTLQRTDSSMEKQTKVNDPSTLGTLTMKGKAEDLETPPQLDPRQNISQNGTSKM 803
Query: 559 VLSQSVLQ---PDITQQFTKNLKHIADFMSVSQPLTSEPMVSQNSPIQPGQIKSGADMKA 615
+S +L PD + QFTKNLK IAD + VSQ L + P + + Q+K+ D+K
Sbjct: 804 KISGELLSGKTPDFSTQFTKNLKSIADMVVVSQQLGNPP-----ASMHSVQLKTERDVKH 858
Query: 616 VVTN-----HDDKQTGTGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRL 670
+N D + AGP + ++WGDVEHLFEGYDD Q+ AIQ+ER RRL
Sbjct: 859 NPSNPNAQDEDVSVSAASVTAAAGPTRS--MNSWGDVEHLFEGYDDIQRVAIQRERVRRL 916
Query: 671 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 730
EEQ KMF+++KL LVLD+DHTLLNSAKF+EV+ H+EILRKKEEQDREKP+RHLFRF HM
Sbjct: 917 EEQNKMFASQKLSLVLDIDHTLLNSAKFNEVESRHEEILRKKEEQDREKPYRHLFRFLHM 976
Query: 731 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 790
GMWTKLRPGIW FLE+ASKL+E+HLYTMGNKLYATEMAK+LDPKGVLF GRVIS+GDDGD
Sbjct: 977 GMWTKLRPGIWNFLEKASKLYELHLYTMGNKLYATEMAKLLDPKGVLFNGRVISKGDDGD 1036
Query: 791 PFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQFGLL 850
P DGDERVPKSKDLEGV+GMES+VVIIDDSVRVWP +K+NLI VERY YFPCSRRQFGLL
Sbjct: 1037 PLDGDERVPKSKDLEGVMGMESSVVIIDDSVRVWPQHKMNLIAVERYLYFPCSRRQFGLL 1096
Query: 851 GPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSHQSLDDVDVRNILAAEQRKILAGCRI 910
GPSLLE+D DE E+GTLASSL VIE++H+ FFSH SLD+VDVRNILA+EQRKILAGCRI
Sbjct: 1097 GPSLLELDRDEVPEEGTLASSLAVIEKIHQNFFSHTSLDEVDVRNILASEQRKILAGCRI 1156
Query: 911 VFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFV 970
VFSR+ PVGEA PHLHPLWQTAEQFGAVCT +D+ VTHVV NSLGTDKVNWAL+ GRFV
Sbjct: 1157 VFSRIIPVGEAKPHLHPLWQTAEQFGAVCTTQVDEHVTHVVTNSLGTDKVNWALTRGRFV 1216
Query: 971 VHPGWVEASALLYRRANEQDFAIKP 995
VHPGWVEASA LY+RANE +AI P
Sbjct: 1217 VHPGWVEASAFLYQRANENLYAINP 1241
>sp|Q00IB6|CPL4_ARATH RNA polymerase II C-terminal domain phosphatase-like 4
OS=Arabidopsis thaliana GN=CPL4 PE=1 SV=1
Length = 440
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/329 (44%), Positives = 203/329 (61%), Gaps = 33/329 (10%)
Query: 680 RKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRH------------LFRF 727
RKL LVLDLDHTLLN+ ++ P E++ K H H LF
Sbjct: 121 RKLYLVLDLDHTLLNTTILRDLKP----------EEEYLKSHTHSLQDGCNVSGGSLFLL 170
Query: 728 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 787
M M TKLRP + +FL+ AS++F M++YTMG++ YA +MAK+LDPKG F RVISR D
Sbjct: 171 EFMQMMTKLRPFVHSFLKEASEMFVMYIYTMGDRNYARQMAKLLDPKGEYFGDRVISR-D 229
Query: 788 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQF 847
DG V K L+ VLG ESAV+I+DD+ WP +K NLIV+ERY +F S RQF
Sbjct: 230 DGT-------VRHEKSLDVVLGQESAVLILDDTENAWPKHKDNLIVIERYHFFSSSCRQF 282
Query: 848 GLLGPSLLEIDHDERSEDGTLASSLGVIERLHKIFFSH--QSLDDVDVRNILAAEQRKIL 905
SL E+ DE DG LA+ L V+++ H +FF + + + + DVR +L +++IL
Sbjct: 283 DHRYKSLSELKSDESEPDGALATVLKVLKQAHALFFENVDEGISNRDVRLMLKQVRKEIL 342
Query: 906 AGCRIVFSRVFPVGEANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALS 965
GC+IVFSRVFP +A P HPLW+ AE+ GA C +D VTHVVA +GT+K WA+
Sbjct: 343 KGCKIVFSRVFPT-KAKPEDHPLWKMAEELGATCATEVDASVTHVVAMDVGTEKARWAVR 401
Query: 966 TGRFVVHPGWVEASALLYRRANEQDFAIK 994
++VVH GW++A+ L+ + E++F ++
Sbjct: 402 EKKYVVHRGWIDAANYLWMKQPEENFGLE 430
>sp|Q7TSG2|CTDP1_MOUSE RNA polymerase II subunit A C-terminal domain phosphatase OS=Mus
musculus GN=Ctdp1 PE=1 SV=1
Length = 960
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 100/180 (55%), Gaps = 21/180 (11%)
Query: 663 QKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHR 722
Q E+ R E+Q+++ RKL L++DLD TL+++ + H + I H
Sbjct: 165 QAEKLGR-EDQQRLHRNRKLVLMVDLDQTLIHTTEQHCPQMSNKGIF-----------HF 212
Query: 723 HLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRV 782
L R M + T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+ R+
Sbjct: 213 QLGRGEPM-LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRI 271
Query: 783 ISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTYFP 841
+SR + DPF K+ +L + +S V IIDD VW NLI V++Y YFP
Sbjct: 272 LSRDECIDPFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVYFP 324
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 64/138 (46%), Gaps = 23/138 (16%)
Query: 874 VIERLHKIFFS------HQSLDDV-DVRNILAAEQRKILAGCRIVFSRV----FPVGEAN 922
++ R+H +++ ++ L++ D+R I+ + K+LA ++FS + FPV +
Sbjct: 586 ILVRVHTDYYTKYDRYLNKELEEAPDIRKIVPELKSKVLADVAVIFSGLHPTNFPVEKTR 645
Query: 923 PHLHPLWQTAEQFGA------VCTKHIDDQVTHVVANSLGTDKVNWALSTGRF-VVHPGW 975
H H A GA V + D+ TH++A GT+KV A VV P W
Sbjct: 646 EHYH-----ATALGAKVLTQLVLSPDAPDRATHLIAARAGTEKVRQAQECKHLHVVSPDW 700
Query: 976 VEASALLYRRANEQDFAI 993
+ + + + EQ F +
Sbjct: 701 LWSCLERWDKVEEQLFPL 718
>sp|Q9Y5B0|CTDP1_HUMAN RNA polymerase II subunit A C-terminal domain phosphatase OS=Homo
sapiens GN=CTDP1 PE=1 SV=3
Length = 961
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/171 (36%), Positives = 95/171 (55%), Gaps = 20/171 (11%)
Query: 671 EEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHM 730
E+Q+++ RKL L++DLD TL+++ + H + I H L R M
Sbjct: 172 EDQQRLHRNRKLVLMVDLDQTLIHTTEQHCQQMSNKGIF-----------HFQLGRGEPM 220
Query: 731 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 790
+ T+LRP FLE+ +KL+E+H++T G++LYA +A LDP+ LF+ R++SR + D
Sbjct: 221 -LHTRLRPHCKDFLEKIAKLYELHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECID 279
Query: 791 PFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVVERYTYF 840
PF K+ +L + +S V IIDD VW NLI V++Y YF
Sbjct: 280 PFS------KTGNLRNLFPCGDSMVCIIDDREDVWKFAP-NLITVKKYVYF 323
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 67/139 (48%), Gaps = 23/139 (16%)
Query: 874 VIERLHKIFFS------HQSLDDV-DVRNILAAEQRKILAGCRIVFSRV----FPVGEAN 922
++ R+H +++ ++ +++ D+R I+ + K+LA I+FS + FP+ +
Sbjct: 596 ILVRVHTDYYAKYDRYLNKEIEEAPDIRKIVPELKSKVLADVAIIFSGLHPTNFPIEKTR 655
Query: 923 PHLHPLWQTAEQFGA------VCTKHIDDQVTHVVANSLGTDKVNWALSTGRF-VVHPGW 975
H H A GA V + D+ TH++A GT+KV A G VV+P W
Sbjct: 656 EHYH-----ATALGAKILTRLVLSPDAPDRATHLIAARAGTEKVLQAQECGHLHVVNPDW 710
Query: 976 VEASALLYRRANEQDFAIK 994
+ + + + EQ F ++
Sbjct: 711 LWSCLERWDKVEEQLFPLR 729
>sp|Q9P376|FCP1_SCHPO RNA polymerase II subunit A C-terminal domain phosphatase
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=fcp1 PE=1 SV=1
Length = 723
Score = 96.7 bits (239), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 108/216 (50%), Gaps = 44/216 (20%)
Query: 651 FEGYDDQQKAAIQK-----------ERTRRLEEQ--KKMFSARKLCLVLDLDHTLLNSAK 697
+ GY D +A I E RLE + K++ ++L L++DLD T++++
Sbjct: 121 YMGYSDMARANISMTHNTGDLTVSLEEASRLESENVKRLRQEKRLSLIVDLDQTIIHAT- 179
Query: 698 FHEVDP-----------VHDEILRKKEEQD-REKPHRHLFRFPHMGMWTKLRPGIWTFLE 745
VDP V+ ++LR + +E P + + + K RPG+ FL+
Sbjct: 180 ---VDPTVGEWMSDPGNVNYDVLRDVRSFNLQEGPSGYTSCY-----YIKFRPGLAQFLQ 231
Query: 746 RASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLE 805
+ S+L+E+H+YTMG K YA E+AK++DP G LF RV+SR D G K L
Sbjct: 232 KISELYELHIYTMGTKAYAKEVAKIIDPTGKLFQDRVLSRDDSGS--------LAQKSLR 283
Query: 806 GVLGME-SAVVIIDDSVRVWPHNKLNLIVVERYTYF 840
+ + S VV+IDD VW N NLI V Y +F
Sbjct: 284 RLFPCDTSMVVVIDDRGDVWDWNP-NLIKVVPYEFF 318
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 874 VIERLHKIFFSHQSLDDVDVRN----------ILAAEQRKILAGCRIVFSRVFPVGEANP 923
V++ +H +++ + +D+ R+ I+ ++K+L GCR++FS V P+G +
Sbjct: 452 VLKDIHAVYYEEE--NDISSRSGNHKHANVGLIIPKMKQKVLKGCRLLFSGVIPLG-VDV 508
Query: 924 HLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRF-VVHPGWVEASALL 982
+ + A FGA TH++A + T+KV A+S G VV W+ S
Sbjct: 509 LSSDIAKWAMSFGAEVVLDFSVPPTHLIAAKIRTEKVKKAVSMGNIKVVKLNWLTESLSQ 568
Query: 983 YRRANEQDFAIKP 995
++R E D+ + P
Sbjct: 569 WKRLPESDYLLYP 581
>sp|Q03254|FCP1_YEAST RNA polymerase II subunit A C-terminal domain phosphatase
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=FCP1 PE=1 SV=1
Length = 732
Score = 79.0 bits (193), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 101/246 (41%), Gaps = 57/246 (23%)
Query: 625 TGTGSGPEAGPVGAHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLEEQKKMFSARKLCL 684
T G A P GDV+ + + KE RR +KL L
Sbjct: 127 TQCGKEVSADAFDGVPLDVVGDVDLQISETEAIRTGKALKEHLRR---------DKKLIL 177
Query: 685 VLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFR------------FPHMGM 732
V+DLD T+++ VDP E + D P+ R P M M
Sbjct: 178 VVDLDQTIIHCG----VDPTIAEW-----KNDPNNPNFETLRDVKSFTLDEELVLPLMYM 228
Query: 733 -----------------WTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKG 775
+ K+RPG+ F + + LFEMH+YTM + YA ++AK++DP G
Sbjct: 229 NDDGSMLRPPPVRKCWYYVKVRPGLKEFFAKVAPLFEMHIYTMATRAYALQIAKIVDPTG 288
Query: 776 VLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGM-ESAVVIIDDSVRVWPHNKLNLIVV 834
LF R++SR ++G +K L + +S VV+IDD VW NLI V
Sbjct: 289 ELFGDRILSRDENGS--------LTTKSLAKLFPTDQSMVVVIDDRGDVWNWCP-NLIKV 339
Query: 835 ERYTYF 840
Y +F
Sbjct: 340 VPYNFF 345
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 859 HDER---SEDGTLASSLGVIERLHKIFF---SHQSLDDVDVRNILAAEQRKILAGCRIVF 912
HD++ +D L +G + +HK ++ S Q+ + ++ I+ + ++K+ C VF
Sbjct: 452 HDQKLLVDDDDELYYLMGTLSNIHKTYYDMLSQQNEPEPNLMEIIPSLKQKVFQNCYFVF 511
Query: 913 SRVFPVG-EANPHLHPLWQTAEQFGAVCTKHIDDQVTHVVANSLGTDKVNWA--LSTGRF 969
S + P+G + +W + FGA T ID TH++ + T K A +
Sbjct: 512 SGLIPLGTDIQRSDIVIWTST--FGATSTPDIDYLTTHLITKNPSTYKARLAKKFNPQIK 569
Query: 970 VVHPGWVEASALLYRRANEQDFAI 993
+VHP W+ + +++ +E+ + +
Sbjct: 570 IVHPDWIFECLVNWKKVDEKPYTL 593
>sp|Q8SV03|FCP1_ENCCU RNA polymerase II subunit A C-terminal domain phosphatase
OS=Encephalitozoon cuniculi (strain GB-M1) GN=FCP1 PE=1
SV=1
Length = 411
Score = 71.6 bits (174), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 49/193 (25%)
Query: 657 QQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD 716
++ AI KE+ LE Q K+ LVLDLD T+L++ + + +
Sbjct: 42 EEAVAIHKEKMEALEMQMKLI------LVLDLDQTVLHTT--YGTSSLEGTVK------- 86
Query: 717 REKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGV 776
F KLRP + L R SKL+E+H+YTMG + YA + +++DP G
Sbjct: 87 --------FVIDRCRYCVKLRPNLDYMLRRISKLYEIHVYTMGTRAYAERIVEIIDPSGK 138
Query: 777 LFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGMESA---------VVIIDDSVRVWPHN 827
F R+I+R ++ +GVL + +VI+DD VW +
Sbjct: 139 YFDDRIITRDEN----------------QGVLVKRLSRLFPHDHRNIVILDDRPDVWDYC 182
Query: 828 KLNLIVVERYTYF 840
+ NL+++ + YF
Sbjct: 183 E-NLVLIRPFWYF 194
>sp|Q66KM5|CTSL2_XENTR CTD small phosphatase-like protein 2 OS=Xenopus tropicalis
GN=ctdspl2 PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 630 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 687
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 688 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 747
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 748 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 807
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 808 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q3KQB6|CTL2B_XENLA CTD small phosphatase-like protein 2-B OS=Xenopus laevis
GN=ctdspl2-b PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 630 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 687
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 688 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 747
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 748 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 807
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 808 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q801R4|CTL2A_XENLA CTD small phosphatase-like protein 2-A OS=Xenopus laevis
GN=ctdspl2-a PE=2 SV=1
Length = 466
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 24/211 (11%)
Query: 630 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 687
PE+G AH ++A+ + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPESGYSSAHAEAAYEEDWEVFDPYFFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 688 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 747
LD TL++ + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETLVHCSL--------------NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 748 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 807
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKRLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 808 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q08BB5|CTL2A_DANRE CTD small phosphatase-like protein 2-A OS=Danio rerio GN=ctdspl2a
PE=2 SV=1
Length = 469
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 111/254 (43%), Gaps = 36/254 (14%)
Query: 590 LTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAHPQSAWGDVEH 649
L P+ ++ ++ G+I + ADM + T GS V P A G E
Sbjct: 203 LNPRPLPHIDTTVEEGEIVTEADMPPL--------TAVGSNSNYPDVPPSP-PAEGTYEE 253
Query: 650 LFEGYD-----DQQKAAIQKERTRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPV 704
+E +D +++ TR+ K S + LVLDLD TL++ +
Sbjct: 254 DWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTRSTPEFSLVLDLDETLVHCSL------- 306
Query: 705 HDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYA 764
E +D LF+ ++ +LRP FLER S+++E+ L+T K+YA
Sbjct: 307 -------NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMSQIYEIILFTASKKVYA 359
Query: 765 TEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVLGME-SAVVIIDDSVRV 823
++ +LDPK L R+ + G+ KDL +LG + S VIID+S +
Sbjct: 360 DKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NILGRDLSKTVIIDNSPQA 412
Query: 824 WPHNKLNLIVVERY 837
+ + N I +E +
Sbjct: 413 FAYQLSNGIPIESW 426
>sp|Q5XIK8|CTSL2_RAT CTD small phosphatase-like protein 2 OS=Rattus norvegicus
GN=Ctdspl2 PE=2 SV=1
Length = 465
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 630 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 687
PE+G AH ++ + + +F+ Y + +++ R+ K S + LVLD
Sbjct: 233 APESGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 292
Query: 688 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 747
LD TL VH + E +D LF+ ++ +LRP FLER
Sbjct: 293 LDETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 338
Query: 748 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 807
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 339 SQMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NI 391
Query: 808 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
LG + S +IID+S + + + N I +E +
Sbjct: 392 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q8BG15|CTSL2_MOUSE CTD small phosphatase-like protein 2 OS=Mus musculus GN=Ctdspl2
PE=1 SV=1
Length = 465
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 631 PEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLDL 688
PE+G AH ++ + + +F+ Y + +++ R+ K S + LVLDL
Sbjct: 234 PESGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDL 293
Query: 689 DHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 748
D TL VH + E +D LF+ ++ +LRP FLER S
Sbjct: 294 DETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMS 339
Query: 749 KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVL 808
+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +L
Sbjct: 340 QMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NIL 392
Query: 809 GME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
G + S +IID+S + + + N I +E +
Sbjct: 393 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 422
>sp|Q5F3Z7|CTSL2_CHICK CTD small phosphatase-like protein 2 OS=Gallus gallus GN=CTDSPL2
PE=2 SV=2
Length = 466
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 24/211 (11%)
Query: 630 GPEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLD 687
P++G AH ++ + + +F+ Y + +++ R+ K S + LVLD
Sbjct: 234 SPDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLD 293
Query: 688 LDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERA 747
LD TL++ + E +D LF+ ++ +LRP FLER
Sbjct: 294 LDETLVHCSL--------------NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERM 339
Query: 748 SKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGV 807
S+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +
Sbjct: 340 SQIYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NI 392
Query: 808 LGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
LG + S +IID+S + + + N I +E +
Sbjct: 393 LGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|Q05D32|CTSL2_HUMAN CTD small phosphatase-like protein 2 OS=Homo sapiens GN=CTDSPL2
PE=1 SV=2
Length = 466
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 98/210 (46%), Gaps = 24/210 (11%)
Query: 631 PEAGPVGAHPQSAWGDVEHLFEGYDDQQKA--AIQKERTRRLEEQKKMFSARKLCLVLDL 688
P++G AH ++ + + +F+ Y + +++ R+ K S + LVLDL
Sbjct: 235 PDSGYSSAHAEATYEEDWEVFDPYYFIKHVPPLTEEQLNRKPALPLKTRSTPEFSLVLDL 294
Query: 689 DHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIWTFLERAS 748
D TL VH + E +D LF+ ++ +LRP FLER S
Sbjct: 295 DETL-----------VHCSL---NELEDAALTFPVLFQDVIYQVYVRLRPFFREFLERMS 340
Query: 749 KLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERVPKSKDLEGVL 808
+++E+ L+T K+YA ++ +LDPK L R+ + G+ KDL +L
Sbjct: 341 QMYEIILFTASKKVYADKLLNILDPKKQLVRHRLFR--EHCVCVQGN----YIKDL-NIL 393
Query: 809 GME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
G + S +IID+S + + + N I +E +
Sbjct: 394 GRDLSKTIIIDNSPQAFAYQLSNGIPIESW 423
>sp|A4QNX6|CTL2B_DANRE CTD small phosphatase-like protein 2-B OS=Danio rerio GN=ctdspl2b
PE=2 SV=1
Length = 460
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 99/220 (45%), Gaps = 28/220 (12%)
Query: 625 TGTGSGPEAGPVGAHPQS-AWGDVEHLFEGYD-----DQQKAAIQKERTRRLEEQKKMFS 678
T GS G V A A G E +E +D +++ TR+ K S
Sbjct: 219 TAPGSPATGGYVDASITVPAEGSYEEEWEVFDPYFFIKHVPPLTEEQLTRKPALPLKTRS 278
Query: 679 ARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRP 738
+ LVLDLD TL++ + +E+D D LF+ ++ +LRP
Sbjct: 279 TPEFSLVLDLDETLVHCS-LNELD-------------DAALTFPVLFQDVIYQVYVRLRP 324
Query: 739 GIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDPFDGDERV 798
FLER S+++E+ L+T K+YA ++ +LDP+ L R+ + G+
Sbjct: 325 FFREFLERMSQIYEIILFTASKKVYADKLLNILDPRKQLVRHRLFR--EHCVCVQGN--- 379
Query: 799 PKSKDLEGVLGME-SAVVIIDDSVRVWPHNKLNLIVVERY 837
KDL +LG + S +IID+S + + + N I +E +
Sbjct: 380 -YIKDL-NILGRDLSKTIIIDNSPQAFAYQLSNGIPIESW 417
>sp|Q54GB2|CTSL2_DICDI CTD small phosphatase-like protein 2 OS=Dictyostelium discoideum
GN=ctdspl2 PE=3 SV=1
Length = 567
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 675 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHL---FRFPHMG 731
K S+ K+ LVLDLD TL++ + +P+ E+PH F
Sbjct: 384 KEHSSPKISLVLDLDETLVHCS----TEPL-------------EQPHLTFPVFFNNTEYQ 426
Query: 732 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGDP 791
++ K RP FL + S +FE+ ++T ++YA ++ ++DP + + D
Sbjct: 427 VFAKKRPFFEEFLHKVSDIFEVIIFTASQEVYANKLLNMIDPNNKI---KYRLYRDSCVY 483
Query: 792 FDGDERVPKSKDLEGVLGME-SAVVIIDDS 820
DG+ KDL VLG + VVIID+S
Sbjct: 484 VDGNYL----KDL-SVLGRDLKQVVIIDNS 508
>sp|Q9N4V4|SCPL3_CAEEL CTD small phosphatase-like protein 3 OS=Caenorhabditis elegans
GN=scpl-3 PE=3 SV=1
Length = 287
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 732 MWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPK 774
++ +LRP + TFL R +K FE+ ++T K+YA ++ +LDP+
Sbjct: 101 VYVRLRPHLRTFLSRMAKTFEIIIFTASKKVYANKLCDILDPR 143
>sp|Q07949|PSR2_YEAST Probable phosphatase PSR2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PSR2 PE=1 SV=1
Length = 397
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 24/103 (23%)
Query: 680 RKLCLVLDLDHTLLNSA--KFHEVD---PVHDEILRKKEEQDREKPHRHLFRFPHMGMWT 734
+K CL+LDLD TL++S+ H D PV E D + + ++ +
Sbjct: 226 QKKCLILDLDETLVHSSFKYMHSADFVLPV---------EIDDQVHNVYVIK-------- 268
Query: 735 KLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 777
RPG+ FL R S+L+E+ ++T YA + LDP G +
Sbjct: 269 --RPGVDEFLNRVSQLYEVVVFTASVSRYANPLLDTLDPNGTI 309
>sp|Q07800|PSR1_YEAST Phosphatase PSR1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PSR1 PE=1 SV=1
Length = 427
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 43/104 (41%), Gaps = 28/104 (26%)
Query: 681 KLCLVLDLDHTL-------LNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMW 733
K CL+LDLD TL L SA F + D++ ++
Sbjct: 257 KKCLILDLDETLVHSSFKYLRSADFVLSVEIDDQV---------------------HNVY 295
Query: 734 TKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 777
RPG+ FLER KLFE+ ++T Y + +LD V+
Sbjct: 296 VIKRPGVEEFLERVGKLFEVVVFTASVSRYGDPLLDILDTDKVI 339
>sp|Q9H8V3|ECT2_HUMAN Protein ECT2 OS=Homo sapiens GN=ECT2 PE=1 SV=4
Length = 914
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 934 QFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDF 991
G V K + +VTH+VAN +K A+S G ++ P W+ + + R NEQDF
Sbjct: 201 HMGGVIRKDFNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKA---WERRNEQDF 255
>sp|P58465|CTDSL_MOUSE CTD small phosphatase-like protein OS=Mus musculus GN=Ctdspl PE=2
SV=3
Length = 276
Score = 41.2 bits (95), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 106 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 152
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 795
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 153 -EFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 203
Query: 796 ERVPKSKDLEGVLGME-SAVVIIDDS 820
KDL LG E S V+I+D+S
Sbjct: 204 ----YVKDLSR-LGRELSKVIIVDNS 224
>sp|Q9PTJ6|CTDSL_CHICK CTD small phosphatase-like protein OS=Gallus gallus GN=NFI1 PE=2
SV=2
Length = 275
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 105 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 151
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 795
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 152 -EFLQRMGELFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 202
Query: 796 ERVPKSKDLEGVLGME-SAVVIIDDS 820
KDL LG E S V+I+D+S
Sbjct: 203 ----YVKDLSR-LGRELSKVIIVDNS 223
>sp|Q9GZU7|CTDS1_HUMAN Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Homo sapiens GN=CTDSP1 PE=1 SV=1
Length = 261
Score = 40.8 bits (94), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 657 QQKAAIQKER-TRRLEEQKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQ 715
++ AI K+ + L + K + K+C+V+DLD TL++S+ PV++ E
Sbjct: 65 EENGAIPKQTPVQYLLPEAKAQDSDKICVVIDLDETLVHSS----FKPVNNADFIIPVEI 120
Query: 716 DREKPHRHLFRFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKG 775
D ++ + PH+ FL+R +LFE L+T YA +A +LD G
Sbjct: 121 DGVVHQVYVLKRPHVD----------EFLQRMGELFECVLFTASLAKYADPVADLLDKWG 170
Query: 776 VLFA 779
A
Sbjct: 171 AFRA 174
>sp|Q20432|CNEP1_CAEEL CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
elegans GN=scpl-2 PE=3 SV=1
Length = 246
Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 675 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD-------REKPHRHLFRF 727
++ + ++ LVLDLD TL++S HD +LR+ + R RH +F
Sbjct: 51 RLLTVKRKILVLDLDETLIHSH--------HDGVLRQTVKPGTPSDFTIRVVIDRHPVKF 102
Query: 728 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 787
RP + FL S+ +E+ ++T ++Y T +A LD GR I +
Sbjct: 103 S-----VHERPHVDYFLSVVSQWYELVVFTASMEVYGTSVADRLD------RGRGILKRR 151
Query: 788 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDS---VRVWPHNKL 829
E +KDL + S++ I+D+S R +PHN +
Sbjct: 152 YFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAI 196
>sp|Q07139|ECT2_MOUSE Protein ECT2 OS=Mus musculus GN=Ect2 PE=1 SV=2
Length = 913
Score = 40.4 bits (93), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 934 QFGAVCTKHIDDQVTHVVANSLGTDKVNWALSTGRFVVHPGWVEASALLYRRANEQDFA 992
G V K + +VTH+VAN +K A+S G ++ P W+ + + R NEQ F
Sbjct: 201 HMGGVIRKECNSKVTHLVANCTQGEKFRVAVSLGTPIMKPEWIYKA---WERRNEQCFC 256
>sp|O15194|CTDSL_HUMAN CTD small phosphatase-like protein OS=Homo sapiens GN=CTDSPL PE=1
SV=2
Length = 276
Score = 40.4 bits (93), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 64/146 (43%), Gaps = 33/146 (22%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
K C+V+DLD TL++S+ P+ + E D ++ + PH+
Sbjct: 106 KKCVVIDLDETLVHSS----FKPISNADFIVPVEIDGTIHQVYVLKRPHVD--------- 152
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA-----GRVISRGDDGDPFDGD 795
FL+R +LFE L+T YA +A +LD GV A V RG+
Sbjct: 153 -EFLQRMGQLFECVLFTASLAKYADPVADLLDRWGVFRARLFRESCVFHRGN-------- 203
Query: 796 ERVPKSKDLEGVLGME-SAVVIIDDS 820
KDL LG E S V+I+D+S
Sbjct: 204 ----YVKDLSR-LGRELSKVIIVDNS 224
>sp|P58466|CTDS1_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 1 OS=Mus musculus GN=Ctdsp1 PE=1 SV=1
Length = 261
Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 14/99 (14%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
K+C+V+DLD TL++S+ PV++ E D ++ + PH+
Sbjct: 90 KICVVIDLDETLVHSS----FKPVNNADFIIPVEIDGVVHQVYVLKRPHVD--------- 136
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFA 779
FL+R +LFE L+T YA +A +LD G A
Sbjct: 137 -EFLQRMGELFECVLFTASLAKYADPVADLLDKWGAFRA 174
>sp|Q61C05|CNEP1_CAEBR CTD nuclear envelope phosphatase 1 homolog OS=Caenorhabditis
briggsae GN=scpl-2 PE=3 SV=1
Length = 246
Score = 39.3 bits (90), Expect = 0.15, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 29/165 (17%)
Query: 675 KMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQD-------REKPHRHLFRF 727
++ + ++ LVLDLD TL++S HD +LR+ + R RH +F
Sbjct: 51 RLLTVKRKILVLDLDETLIHSH--------HDGVLRQTVKPGTPSDFTIRVVIDRHPVKF 102
Query: 728 PHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD 787
RP + FL S+ +E+ ++T ++Y + +A LD GR I +
Sbjct: 103 S-----VHERPHVDYFLTVVSQWYELVVFTASMEVYGSSVADKLD------RGRGILKRR 151
Query: 788 DGDPFDGDERVPKSKDLEGVLGMESAVVIIDDS---VRVWPHNKL 829
E +KDL + S++ I+D+S R +PHN +
Sbjct: 152 YFRQHCTMEVGGYTKDLSAIHPDLSSICILDNSPGAYRKFPHNAI 196
>sp|Q5YDB5|CPL2_ARATH RNA polymerase II C-terminal domain phosphatase-like 2
OS=Arabidopsis thaliana GN=CPL2 PE=1 SV=3
Length = 770
Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 734 TKLRPGIWTFLE-----RASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDD 788
KLRP W L + K FE+++ TM + YA EM ++LDP+ L + + + D
Sbjct: 256 VKLRPA-WEELRSYLTAKTRKRFEVYVCTMAERDYALEMWRLLDPEAHLISLKELR--DR 312
Query: 789 GDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWP-HNKLNLIVVERYTYFPCSRRQF 847
D + G + ++IDD ++VW ++ + VV Y + + +
Sbjct: 313 IVCVKPDAKKSLLSVFNGGICHPKMAMVIDDRMKVWEDKDQPRVHVVSAYLPYYAPQAET 372
Query: 848 GLLGPSLL 855
L+ P L
Sbjct: 373 ALVVPHLC 380
>sp|Q5U3T3|CNEPB_DANRE CTD nuclear envelope phosphatase 1B OS=Danio rerio GN=ctdnep1b PE=2
SV=1
Length = 245
Score = 37.7 bits (86), Expect = 0.44, Method: Composition-based stats.
Identities = 46/188 (24%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ + ++ LVLDLD TL++S HD +LR +H
Sbjct: 54 RNRLNNVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 105
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 106 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNKAILKRRYYRQ 160
Query: 786 G---DDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPC 842
D G KDL V S+VVI+D+S + + N I ++ + P
Sbjct: 161 HCTLDSGSYI---------KDLSVVHDDLSSVVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 843 SRRQFGLL 850
LL
Sbjct: 212 DTALLNLL 219
>sp|Q9W0S3|TI50B_DROME Mitochondrial import inner membrane translocase subunit TIM50-B
OS=Drosophila melanogaster GN=ttm2 PE=2 SV=1
Length = 409
Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 731 GMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGDDGD 790
G K RPG+ FL+ +K FE+ +YT + + LDP G + V D
Sbjct: 230 GWRFKKRPGVDVFLKECAKYFEIVVYTAEQGVTVFPLVDALDPNGCIMYRLV----RDST 285
Query: 791 PFDGDERVPKSKDLEGVLGMESAVVIID---DSVRVWPHNKLNL 831
FDG V K+L+ + VV++D +S + P N ++
Sbjct: 286 HFDGGHHV---KNLDNLNRDLKRVVVVDWDRNSTKFHPSNSFSI 326
>sp|Q8BX07|CTDS2_MOUSE Carboxy-terminal domain RNA polymerase II polypeptide A small
phosphatase 2 OS=Mus musculus GN=Ctdsp2 PE=2 SV=1
Length = 270
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
++C+V+DLD TL++S+ P+++ E + ++ + RP +
Sbjct: 100 RICVVIDLDETLVHSS----FKPINNADFIVPVEIEGTTHQVYVLK----------RPYV 145
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVI 783
FL R +LFE L+T YA + +LD GV F R+
Sbjct: 146 DEFLRRMGELFECVLFTASLAKYADPVTDLLDRCGV-FRARLF 187
>sp|Q5U395|CNEPA_DANRE CTD nuclear envelope phosphatase 1A OS=Danio rerio GN=ctdnep1a PE=2
SV=1
Length = 245
Score = 35.4 bits (80), Expect = 2.1, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 35/203 (17%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ + ++ LVLDLD TL++S HD +LR +H
Sbjct: 54 RNRLNAVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 105
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 106 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNNRGILKRRYYRQ 160
Query: 786 G---DDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPC 842
D G KDL V S++VI+D+S + + N I ++ + P
Sbjct: 161 HCTLDLGSYI---------KDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPS 211
Query: 843 SRRQFGLLGPSL--LEIDHDERS 863
LL P L L D RS
Sbjct: 212 DTALLNLL-PMLDALRFTSDVRS 233
>sp|Q3B7T6|CNEP1_RAT CTD nuclear envelope phosphatase 1 OS=Rattus norvegicus GN=Ctdnep1
PE=2 SV=2
Length = 244
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 26/185 (14%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 786 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 845
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 846 QFGLL 850
LL
Sbjct: 214 LLNLL 218
>sp|Q3TP92|CNEP1_MOUSE CTD nuclear envelope phosphatase 1 OS=Mus musculus GN=Ctdnep1 PE=2
SV=2
Length = 244
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 26/185 (14%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 786 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 845
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 846 QFGLL 850
LL
Sbjct: 214 LLNLL 218
>sp|O95476|CNEP1_HUMAN CTD nuclear envelope phosphatase 1 OS=Homo sapiens GN=CTDNEP1 PE=1
SV=2
Length = 244
Score = 35.0 bits (79), Expect = 3.1, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 26/185 (14%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLAQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 786 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 845
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 846 QFGLL 850
LL
Sbjct: 214 LLNLL 218
>sp|Q1RMV9|CNEP1_BOVIN CTD nuclear envelope phosphatase 1 OS=Bos taurus GN=CTDNEP1 PE=2
SV=1
Length = 244
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 26/185 (14%)
Query: 673 QKKMFSARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKP-------HRHLF 725
+ ++ ++ LVLDLD TL++S HD +LR +H
Sbjct: 53 RNRLSQVKRKILVLDLDETLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPV 104
Query: 726 RFPHMGMWTKLRPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISR 785
RF + RP + FLE S+ +E+ ++T ++Y + +A LD + R +
Sbjct: 105 RF-----FVHKRPHVDFFLEVVSQWYELVVFTASMEIYGSAVADKLDNSRSILKRRYYRQ 159
Query: 786 GDDGDPFDGDERVPKSKDLEGVLGMESAVVIIDDSVRVWPHNKLNLIVVERYTYFPCSRR 845
E KDL V S++VI+D+S + + N I ++ + P
Sbjct: 160 ------HCTLELGSYIKDLSVVHSDLSSIVILDNSPGAYRSHPDNAIPIKSWFSDPSDTA 213
Query: 846 QFGLL 850
LL
Sbjct: 214 LLNLL 218
>sp|Q09695|YA22_SCHPO Uncharacterized protein C2F7.02c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.02c PE=1 SV=1
Length = 325
Score = 34.7 bits (78), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 14/97 (14%)
Query: 681 KLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGI 740
K CL+LDLD TL++S+ F ++P + + E + R RPG+
Sbjct: 157 KKCLILDLDETLVHSS-FKYIEPA--DFVVSIEIDGLQHDVR-----------VVKRPGV 202
Query: 741 WTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 777
FL++ +FE+ ++T YA + +LD V+
Sbjct: 203 DEFLKKMGDMFEIVVFTASLAKYADPVLDMLDHSHVI 239
>sp|Q8JIL9|CNEP1_XENLA CTD nuclear envelope phosphatase 1 OS=Xenopus laevis GN=ctdnep1
PE=1 SV=1
Length = 244
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 82/198 (41%), Gaps = 39/198 (19%)
Query: 638 AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLE-------EQKKMFSARKLCLVLDLDH 690
A W V +L +Q I + +T R + + ++ ++ LVLDLD
Sbjct: 15 AFAAKLWSFVLYLLR----RQFRTIIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDE 70
Query: 691 TLLNSAKFHEVDPVHDEILRKK-------EEQDREKPHRHLFRFPHMGMWTKLRPGIWTF 743
TL++S HD +LR + + +H RF + RP + F
Sbjct: 71 TLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPVRF-----FVHKRPHVDFF 117
Query: 744 LERASKLFEMHLYTMGNKLYATEMAKVLD-PKGVLFAGRVISRGDDGDPFDGDERVPKSK 802
LE S+ +E+ ++T ++Y + +A LD KGVL R E K
Sbjct: 118 LEVVSQWYELVVFTASMEIYGSAVADKLDNNKGVL-------RRRFYRQHCTLELGSYIK 170
Query: 803 DLEGVLGMESAVVIIDDS 820
DL V S+VVI+D+S
Sbjct: 171 DLSVVHSDLSSVVILDNS 188
>sp|Q01263|HYUB_PSESN Hydantoin utilization protein B OS=Pseudomonas sp. (strain NS671)
GN=hyuB PE=3 SV=1
Length = 592
Score = 34.3 bits (77), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 143 LVVGDGMVKSWAAAAKLSHNAEVHKTPHYETDALRAFS----SYQQKFGRNSF------- 191
LVVGD +++ AAA++ + Y D ++A S +Y +K R++
Sbjct: 190 LVVGD--MEAQIAAARIGAQRYIEIIEKYGLDTVQAASEELMNYSEKMMRDAIKKLPDGE 247
Query: 192 -----FMNSELPSPTPSEES--------GDGDGDTGGEISSATAVDQPKPVNMPTLGQQP 238
F++ L S P+++ DG D +++ + KP+NMP LG
Sbjct: 248 YTAEGFLDGYLDSDDPAKKDLRINVTVKVDGS-DLTVDLTGTSPQVTDKPINMPLLGT-- 304
Query: 239 VSSQPMDISQPMDISSVQALTTANNSAPASSGY---NPVVKPNPVVKAPIKSRDPRLRFA 295
+DI+ + + S+ +T + P +SG +V P + PI RF
Sbjct: 305 -----VDIAIYLTLRSILLDSTVYGNFPQNSGLIRPIKIVAPKGTLCNPIFPAPTIARFN 359
Query: 296 SSNAL 300
S NA+
Sbjct: 360 SGNAV 364
>sp|P38757|NEM1_YEAST Nuclear envelope morphology protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=NEM1 PE=1 SV=1
Length = 446
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 24/184 (13%)
Query: 678 SARKLCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKL- 736
+ +K LV+DLD TL++SA R + + H +F G+ T
Sbjct: 248 TQKKKKLVIDLDETLIHSAS------------RSTTHSNSSQGHLVEVKFGLSGIRTLYF 295
Query: 737 ---RPGIWTFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVLFAGRVISRGD----DG 789
RP FL + SK +++ ++T K YA + L+ + R D DG
Sbjct: 296 IHKRPYCDLFLTKVSKWYDLIIFTASMKEYADPVIDWLESSFPSSFSKRYYRSDCVLRDG 355
Query: 790 DPFDGDERVPKSKDLEGVLGMESA---VVIIDDSVRVWPHNKLNLIVVERYTYFPCSRRQ 846
+ D + K + G G S+ V+IID+S + N N I VE + P
Sbjct: 356 VGYIKDLSIVKDSEENGK-GSSSSLDDVIIIDNSPVSYAMNVDNAIQVEGWISDPTDTDL 414
Query: 847 FGLL 850
LL
Sbjct: 415 LNLL 418
>sp|Q28HW9|CNEP1_XENTR CTD nuclear envelope phosphatase 1 OS=Xenopus tropicalis GN=ctdnep1
PE=2 SV=1
Length = 244
Score = 33.9 bits (76), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 39/198 (19%)
Query: 638 AHPQSAWGDVEHLFEGYDDQQKAAIQKERTRRLE-------EQKKMFSARKLCLVLDLDH 690
A W V +L +Q I + +T R + + ++ ++ LVLDLD
Sbjct: 15 AFAAKLWSFVLYLLR----RQVRTIIQYQTVRYDVLPLSPASRNRLSQVKRKVLVLDLDE 70
Query: 691 TLLNSAKFHEVDPVHDEILRKK-------EEQDREKPHRHLFRFPHMGMWTKLRPGIWTF 743
TL++S HD +LR + + +H RF + RP + F
Sbjct: 71 TLIHSH--------HDGVLRPTVRPGTPPDFILKVVIDKHPVRF-----FVHKRPHVDFF 117
Query: 744 LERASKLFEMHLYTMGNKLYATEMAKVLDP-KGVLFAGRVISRGDDGDPFDGDERVPKSK 802
LE S+ +E+ ++T ++Y + +A LD +GVL R E K
Sbjct: 118 LEVVSQWYELVVFTASMEIYGSAVADKLDNNRGVL-------RRRFYRQHCTLELGSYIK 170
Query: 803 DLEGVLGMESAVVIIDDS 820
DL V S+VVI+D+S
Sbjct: 171 DLSVVHSDLSSVVILDNS 188
>sp|Q8VYE2|TIM50_ARATH Mitochondrial import inner membrane translocase subunit TIM50
OS=Arabidopsis thaliana GN=TIM50 PE=1 SV=1
Length = 376
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 29/96 (30%)
Query: 682 LCLVLDLDHTLLNSAKFHEVDPVHDEILRKKEEQDREKPHRHLFRFPHMGMWTKLRPGIW 741
LVLDL+ TLL + + RE+ G T RPG+
Sbjct: 191 FTLVLDLNETLLYT------------------DWKRER-----------GWRTFKRPGVD 221
Query: 742 TFLERASKLFEMHLYTMGNKLYATEMAKVLDPKGVL 777
FLE K +E+ +Y+ ++Y + + LDP G +
Sbjct: 222 AFLEHLGKFYEIVVYSDQMEMYVLPVCEKLDPNGYI 257
>sp|Q5ZIE8|MCAF1_CHICK Activating transcription factor 7-interacting protein 1 OS=Gallus
gallus GN=ATF7IP PE=2 SV=1
Length = 1085
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 589 PLTSEPMVSQNSPIQPGQIKSGADMKAVVTNHDDKQTGTGSGPEAGPVGAH 639
P S P V +NSP G +++ ++AV T H QT S P G G H
Sbjct: 661 PSVSSPGVQRNSPASAGSVRTTLAVQAVSTTHPVAQTTRTSLPTVGTSGLH 711
>sp|Q9X9J3|FLGJ_VIBPA Peptidoglycan hydrolase FlgJ OS=Vibrio parahaemolyticus serotype
O3:K6 (strain RIMD 2210633) GN=flgJ PE=3 SV=1
Length = 308
Score = 33.5 bits (75), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Query: 151 KSWAAAAKLSHNAEVH-KTPHYETDALRAFSSYQQKFGRNSFFMNSELPSPTPSEESGDG 209
+SW + E H TP ET A R++S+YQ F F+N T ++ GD
Sbjct: 217 RSWQGDKVTTQTLEFHDNTPVKETAAFRSYSNYQDSFNDYVRFLNDNPRYETALQQRGDS 276
Query: 210 DGDTGGEISSATAVD 224
+ G + A D
Sbjct: 277 ESFIRGIHRAGYATD 291
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 395,501,210
Number of Sequences: 539616
Number of extensions: 18406678
Number of successful extensions: 40649
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 40218
Number of HSP's gapped (non-prelim): 502
length of query: 995
length of database: 191,569,459
effective HSP length: 127
effective length of query: 868
effective length of database: 123,038,227
effective search space: 106797181036
effective search space used: 106797181036
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)