Citrus Sinensis ID: 001939

Local Sequence Feature Prediction

Prediction and Method	Result

Residue Number Marker

Protein Sequence

Secondary Structure (Consensus)

Disordered Region (Consensus)

Transmembrane Helix (Consensus)

Signal Peptide (Consensus)

Coiled Coil (COILS)

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990---

MRINETDGVSASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKLSTEDFEILHGDCQGLPDTMSFLKSLVELDIIKDSDRTPEKRQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEGSSPGAGKFGHLRIRRRSVSLKPNQ

cccccccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHccccccEEEEcccccccccccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHccccEEEEEcccHHHHHHHHHHHccccHHHHHHHHHHHHHccccEEEcccccccccccccEECccccccccccHHHHHHHHccccccEEEEEEcccccccccccccccccccEEEEEccccccccccEEEcccccccccHHHccccccccccHHHHHHHHHccccEEEEEccccccHHHHHHHHHHHcccEEEcHHHHHccccHHHHHHHccccccccccccHHHHHHHHHHHHHcccccccccccccHHHHHHHEccEEccccccccccccccccccHHHccccccccccccccccccccccccccEEEcccccccccHHHHHHccccccccccccccHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccccccccccccccccEEEEEEEccccccEEEEHHccccccccccccccEEEEEcccccccccccccccccccccccccccHHcccccccccccccccccHHHHHHHHHHHHcccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccccHHHHHHHHccccccEEEEEccccccccccccccccEEEEEEcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHcccccccccHHccccccccccccccccccccccccccEEEEEEcHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEccccccccEEEEEEEccccccccc

**************HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGRDVSIPEWYQTA***********************LSTEDFEILHGDCQGLPDTMSFLKSLVELDII**************RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEGSSPGAGKFGHLRI***********

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Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries

Annotation	Function Description	Confidence Level	Reference Protein
L-arabinokinase	Arabinose kinase. Involved in the salvage pathway which converts free L-arabinose to UDP-L-arabinose. May play a role in arabinose transport.	confident	O23461

Prediction of Enzyme Commission Number

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 1PIE, chain A
Confidence level:very confident
Coverage over the Query: 481-540,562-586,603-759,791-816,843-907,919-977
View the alignment between query and template
View the model in PyMOL

Template: 1KVK, chain A
Confidence level:very confident
Coverage over the Query: 496-545,567-740,756-761,796-799,812-818,843-907,919-976
View the alignment between query and template
View the model in PyMOL

Template: 3V2U, chain C
Confidence level:very confident
Coverage over the Query: 480-540,562-907,919-977
View the alignment between query and template
View the model in PyMOL

Template: 2IYA, chain A
Confidence level:confident
Coverage over the Query: 14-371
View the alignment between query and template
View the model in PyMOL

Template: 3S28, chain A
Confidence level:probable
Coverage over the Query: 215-401
View the alignment between query and template
View the model in PyMOL