Query 001946
Match_columns 992
No_of_seqs 48 out of 50
Neff 2.5
Searched_HMMs 29240
Date Mon Mar 25 05:47:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001946.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001946hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2f6h_X Myosin-2, type V myosin 99.0 9.3E-10 3.2E-14 118.7 9.4 290 603-986 44-345 (419)
2 3mmi_A Myosin-4; globular tail 98.6 1.4E-07 4.7E-12 102.4 12.2 303 569-986 17-329 (386)
3 1ugk_A Synaptotagmin IV, KIAA1 89.0 4 0.00014 36.1 11.1 104 20-141 25-132 (138)
4 2enp_A B/K protein; C2 type 1, 87.0 1.2 4.2E-05 39.8 6.6 70 41-128 58-128 (147)
5 3kwu_A MUNC13-1; calcium bindi 85.1 1.7 5.9E-05 38.8 6.5 113 19-159 19-144 (148)
6 3f04_A Synaptotagmin-1; C2A, c 84.3 4.4 0.00015 36.0 8.7 91 20-128 37-129 (143)
7 3pyc_A E3 ubiquitin-protein li 84.1 7.6 0.00026 34.1 10.1 119 19-159 7-130 (132)
8 1rlw_A Phospholipase A2, CALB 79.3 5.9 0.0002 34.2 7.5 88 20-127 6-97 (126)
9 2ep6_A MCTP2 protein; beta san 78.2 12 0.0004 32.9 9.2 71 71-159 58-129 (133)
10 3m7f_B E3 ubiquitin-protein li 78.0 12 0.00041 34.7 9.6 76 71-161 59-140 (176)
11 3n5a_A Synaptotagmin-7; calciu 77.6 6.6 0.00023 34.2 7.4 91 20-128 19-113 (138)
12 3b7y_A E3 ubiquitin-protein li 77.2 3.7 0.00013 36.8 5.8 119 19-159 22-150 (153)
13 2cm5_A Rabphilin-3A; protein t 76.8 5.6 0.00019 36.5 6.9 91 20-128 40-134 (166)
14 2r83_A Synaptotagmin-1; C2A-C2 76.6 17 0.00059 35.6 10.8 90 20-127 22-113 (284)
15 1rsy_A Synaptotagmin I; calciu 76.0 6.7 0.00023 35.4 7.1 90 20-127 45-136 (152)
16 2d8k_A Synaptotagmin VII; exoc 75.7 5.3 0.00018 35.4 6.3 92 20-128 29-122 (141)
17 1wfj_A Putative elicitor-respo 75.4 3.7 0.00013 36.0 5.2 72 71-160 56-128 (136)
18 2dmh_A Myoferlin; beta-sandwic 75.2 11 0.00038 33.2 8.2 88 19-127 9-98 (140)
19 1wfm_A Synaptotagmin XIII; C2 74.2 1.9 6.3E-05 38.7 3.0 46 71-127 72-118 (138)
20 2z0u_A WW domain-containing pr 71.7 1.4 4.8E-05 41.1 1.6 46 71-127 94-140 (155)
21 1tjx_A Similar to synaptotagmi 69.9 8 0.00027 35.1 6.2 91 20-128 28-122 (159)
22 1v27_A Regulating synaptic mem 69.8 26 0.0009 30.6 9.3 91 20-127 24-120 (141)
23 2b3r_A Phosphatidylinositol-4- 66.9 13 0.00045 33.1 6.8 47 71-128 69-117 (134)
24 1a25_A CALB, protein kinase C 66.4 24 0.00081 31.6 8.4 89 20-127 34-126 (149)
25 3fdw_A Synaptotagmin-like prot 64.2 3.6 0.00012 36.9 2.7 47 71-128 74-121 (148)
26 1w15_A Synaptotagmin IV; metal 62.6 4.6 0.00016 36.3 3.1 89 20-126 33-125 (153)
27 1rh8_A Piccolo protein; beta-s 62.0 2.9 9.8E-05 37.0 1.6 92 19-128 20-125 (142)
28 2fk9_A Protein kinase C, ETA t 61.9 9.7 0.00033 36.2 5.3 65 72-159 86-154 (157)
29 2chd_A Rabphilin-3A, exophilin 61.1 17 0.00058 32.1 6.4 91 20-128 32-127 (142)
30 2dmg_A KIAA1228 protein; beta- 58.7 21 0.00072 31.5 6.6 92 20-129 27-123 (142)
31 2bwq_A Regulating synaptic mem 57.6 7 0.00024 33.8 3.2 93 19-128 20-118 (129)
32 2q3x_A Regulating synaptic mem 56.2 4.6 0.00016 37.6 2.0 44 71-128 81-126 (171)
33 1gmi_A Protein kinase C, epsil 55.9 7.8 0.00027 34.4 3.3 42 71-127 63-105 (136)
34 2nq3_A Itchy homolog E3 ubiqui 54.2 14 0.00049 35.0 5.0 75 71-161 81-160 (173)
35 3rdl_A Protein kinase C alpha 53.9 33 0.0011 29.8 6.9 77 50-147 52-129 (137)
36 1dqv_A Synaptotagmin III; beta 53.4 81 0.0028 31.5 10.5 89 20-126 23-114 (296)
37 3l9b_A Otoferlin; C2-domain, b 50.7 11 0.00039 36.6 3.7 121 15-162 19-142 (144)
38 1dqv_A Synaptotagmin III; beta 47.2 5.5 0.00019 39.9 1.0 48 71-129 202-250 (296)
39 2cjt_A UNC-13 homolog A, MUNC1 46.0 13 0.00044 33.6 3.1 43 71-127 46-88 (131)
40 3fbk_A RGS3, RGP3, regulator o 45.7 52 0.0018 29.7 7.1 45 71-127 76-122 (153)
41 2r83_A Synaptotagmin-1; C2A-C2 45.2 14 0.00047 36.3 3.4 47 71-128 200-247 (284)
42 2lme_A Adhesin YADA; trimeric 43.0 25 0.00086 31.9 4.5 33 563-595 13-45 (105)
43 2cjs_A UNC-13 homolog A, MUNC1 40.7 14 0.00048 35.1 2.6 43 71-127 55-97 (167)
44 1dip_A Delta-sleep-inducing pe 25.5 60 0.0021 29.2 3.8 37 553-589 9-48 (78)
45 1djx_A PLC-D1, phosphoinositid 24.3 2.5E+02 0.0086 32.1 9.6 120 15-159 495-621 (624)
46 3ra3_B P2F; coiled coil domain 22.7 75 0.0026 23.7 3.2 23 564-589 5-27 (28)
47 2er8_A Regulatory protein Leu3 21.3 43 0.0015 27.3 2.0 22 564-585 47-68 (72)
No 1
>2f6h_X Myosin-2, type V myosin; mysoin V, cargo binding, cargo transport, vacuole binding, secreatory vescIle binding, structural protein; 2.25A {Saccharomyces cerevisiae}
Probab=98.97 E-value=9.3e-10 Score=118.74 Aligned_cols=290 Identities=14% Similarity=0.220 Sum_probs=184.8
Q ss_pred ccccCchhhhhhHHHHHHhcccchhhhhHHHhhhccceEEEeecc-cCC-CCcchhhhhhHHHHHHHH--HHHhcCCCCC
Q 001946 603 MSKVHAPARRLSRLYLHACKEDFQSRRASAARSAVSGLVLVAKAC-GND-VPRLTFWLSNSIVLRAII--SQATGRLEQP 678 (992)
Q Consensus 603 ~hKvHtPARRLSRlYiHAcK~~s~~krAsaArn~vSGLVLVaKaC-GND-VpRLTFWlSN~iVLR~II--sqa~~~~~~~ 678 (992)
.+-+-.||.=|-..-.|+.|.....++-+.--.++.++=-|.+.+ |+| +..|.|||||+.-|--.+ .|......
T Consensus 44 ~~~~l~PA~il~~cl~~~~~~~~~~~~~~ll~~ii~~I~~~v~~~~~~d~i~~lafWLSN~~~LL~~L~~k~~~~~~~-- 121 (419)
T 2f6h_X 44 KRDVVYPARILIIVLSEMWRFGLTKQSESFLAQVLTTIQKVVTQLKGNDLIPSGVFWLANVRELYSFVVFALNSILTE-- 121 (419)
T ss_dssp HHHHSHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CCCcchHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcCCCcchhhhhHHHHHHHHHHHHHHHhhhhhhcc--
Confidence 455668888877666667776444443333333444443344445 467 588999999999999988 44431000
Q ss_pred CccccccccCcccCCCCCCCCccccccccccccccccccCCCCCCCCC----ccchHHHHhhhhhhhhhhhhhhhhhc--
Q 001946 679 FAAGQSLERNSSQRGNNNITSPLKWKESASRKKDNRNVMRGSFDDWED----PHTLPSALEKVEAWIFSRIVESIWWQ-- 752 (992)
Q Consensus 679 ~~~~~~~~~ng~~~~~~~~~~~~~wk~~~~~k~~~~~~~~~~~~dW~d----~~tf~~ALekvEsWIFSRIVESVWWQ-- 752 (992)
++.. .++ ...+|.+ ...|...|+-+.-.||+.++..+-=.
T Consensus 122 -----------~~~~-----~~~------------------~~~~~~~y~~l~~~~~~~L~~l~~~iy~~li~~l~k~L~ 167 (419)
T 2f6h_X 122 -----------ETFK-----NGM------------------TDEEYKEYVSLVTELKDDFEALSYNIYNIWLKKLQKQLQ 167 (419)
T ss_dssp -----------CC---------C------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------Cccc-----ccc------------------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 0112221 33456678888889999887554321
Q ss_pred -ccCcccccccccccccccCCccc-cccCCCCCCccccccchhHHHHHHHHHHHHHHccccCCCCCCCCchHHHHHHHHH
Q 001946 753 -TLTPHMQSAAERVMDRDIGSCSR-KNLERTSSSGDQEQINFSLDHWKKAFKDACERLCPVRARGHECGCLPLLARLIME 830 (992)
Q Consensus 753 -~lTPhMQs~~~~~~~~~~~s~s~-k~~~~~~~lgDq~Qg~fSI~LWK~AF~DA~eRLCP~Ra~ghECGCLpvLarlVME 830 (992)
.+.|-||.+..- + .....+ .++.+. .... +...+++-=-+-|......|+ .|+==|.|.++++.
T Consensus 168 p~l~paIl~~~~~--~--~~~~~~~~~~~~k-~~~~--~~~~~~~~Il~~L~~~~~~L~-------~~~V~~~l~~Q~fs 233 (419)
T 2f6h_X 168 KKAINAVVISESL--P--GFSAGETSGFLNK-IFAN--TEEYTMDDILTFFNSIYWCMK-------SFHIENEVFHAVVT 233 (419)
T ss_dssp HHHHHHHTTSCSS--T--TTTC------------------CCCHHHHHHHHHHHHHHHH-------HTTCCHHHHHHHHH
T ss_pred HHHHHHHhCcccc--c--ccccccccccccc-cccC--CCccCHHHHHHHHHHHHHHHH-------HcCCCHHHHHHHHH
Confidence 233444433211 0 000000 011111 1111 112333333333344444332 34455899999999
Q ss_pred HHHHHhHHHHHHHHhcccCCCCCCCCCCCCCCCCcccccCCCCccccchhhhhhhhhhhHHHHhhhcCCCCCCCcccCCC
Q 001946 831 QCVARLDVAMFNAILRESADEIPTDPVSDPISDSKVLPIPAGKSSFGAGAQLKNAIGNWSRWLSDLFGMDDDDSLDNENE 910 (992)
Q Consensus 831 qcVaRLDVAMFNAILRESa~eiPTDPiSDPI~D~kVLPIPaG~lSFGaGAQLKnaIgnWSRwLtDlfGid~dds~~~~~~ 910 (992)
|+..=+++-+||.||-. ++-.+|-.|+|+|.-|+..-.|+... |+.
T Consensus 234 Qlf~~In~~lFN~LL~r-----------------------~~~cs~s~G~qIr~nls~Le~W~~~~-~l~---------- 279 (419)
T 2f6h_X 234 TLLNYVDAICFNELIMK-----------------------RNFLSWKRGLQLNYNVTRLEEWCKTH-GLT---------- 279 (419)
T ss_dssp HHHHHHHHHHHHHHHTC-----------------------SSCCCHHHHHHHHHHHHHHHHHHHHT-TCT----------
T ss_pred HHHHHHHHHHHHHHhcc-----------------------CcccchhhHHHHHhhHHHHHHHHHHc-CCh----------
Confidence 99999999999999852 23589999999999999999999987 331
Q ss_pred CCccccccCCccchhhhhHhhhcccccchhhccCcccccccCCCCChhHHHHHhhccCCCCCCCCCCChHHHHhhc
Q 001946 911 HDADDERQDSSFKSFHLLNALSDLMMLPKDLLLSRSIRKEVCPTFGAPLIKRVLDNFCPDEFCPDPIPRVVLEALD 986 (992)
Q Consensus 911 ~~~~~~~~~~~~k~F~lLnalSDLlMLPKDML~d~SiRKEVCPs~~lpLIkRIL~NF~PDEFcPDPVP~~VlEALn 986 (992)
.....+.-|+.++.||.++|.-+.|-....++||.++..=|.|||..|.||+| .+|||+.|+.++.
T Consensus 280 ---------~a~~~L~~l~Qa~~lLq~~k~~~~d~~~i~~~C~~Ln~~Ql~~il~~Y~~d~~-e~~v~~~~i~~v~ 345 (419)
T 2f6h_X 280 ---------DGTECLQHLIQTAKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVADY-ESPIPQEILRYVA 345 (419)
T ss_dssp ---------THHHHTHHHHHHHHHTTSCCSSHHHHHHHHHHTTTSCHHHHHHHHHHCCCCTT-SCCCCHHHHHHHH
T ss_pred ---------hHHHHHHHHHHHHHHHhhCCCchhhHHHHHHHhhcCCHHHHHHHHHhCCCccC-CCCCCHHHHHHHH
Confidence 01235788999999999999988888888999999999999999999999999 9999999998875
No 2
>3mmi_A Myosin-4; globular tail, dilute domain, motor protein; 2.30A {Saccharomyces cerevisiae}
Probab=98.63 E-value=1.4e-07 Score=102.35 Aligned_cols=303 Identities=14% Similarity=0.162 Sum_probs=185.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccccCCCccccCchhhhhhHHHHHHhcccchhhhhHHHhhhccceEEEeec-c
Q 001946 569 QQLEHKINMLETELREAAAIEASLYSVVAEHGSSMSKVHAPARRLSRLYLHACKEDFQSRRASAARSAVSGLVLVAKA-C 647 (992)
Q Consensus 569 ~ele~rie~LE~ELREaAAlEvsLYSVVaEHGSS~hKvHtPARRLSRlYiHAcK~~s~~krAsaArn~vSGLVLVaKa-C 647 (992)
+||...++.+..+-.|++ |-=|.. ||.-=-+..=|-.||+=|.-.-=|+-|..-..+--+.--++++++==+.+. =
T Consensus 17 ~el~~ll~d~~~~~~ei~--~gl~~~-ip~~~~~~~evl~PA~ii~~~~~~m~~~gl~~~s~~fl~~v~~~I~~~v~~~~ 93 (386)
T 3mmi_A 17 PDLLELLMDLNCYTLEVT--EGYLKK-VNVTEVNGDNVLGPIHVITTVVSSLVRNGLLIQSSKFISKVLLTVESIVMSLP 93 (386)
T ss_dssp -CHHHHHHCHHHHHHHHH--HHTSTT-CCCSCCCC---CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHhhHHHHH--HHHhhc-CCCCCCCccccccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 444444444444444442 222333 554445666788999999888888877655333222222222222222244 3
Q ss_pred cCC-CCcchhhhhhHHHHHHHHHHHhcCCCCCCccccccccCcccCCCCCCCCccccccccccccccccccCCCCCCCCC
Q 001946 648 GND-VPRLTFWLSNSIVLRAIISQATGRLEQPFAAGQSLERNSSQRGNNNITSPLKWKESASRKKDNRNVMRGSFDDWED 726 (992)
Q Consensus 648 GND-VpRLTFWlSN~iVLR~IIsqa~~~~~~~~~~~~~~~~ng~~~~~~~~~~~~~wk~~~~~k~~~~~~~~~~~~dW~d 726 (992)
|.| ++...|||||+--|+.-|.-+-.... . +.|.+
T Consensus 94 ~~d~i~~g~FWLsN~~~l~sFv~~~q~~~~----------~----------------------------------~~~d~ 129 (386)
T 3mmi_A 94 KDETMLGGIFWLSNLSRLPAFAANQKTLYE----------A----------------------------------NGGDE 129 (386)
T ss_dssp TTTHHHHHHHHHHHHTTHHHHHHHHHTTC---------------------------------------------------
T ss_pred CccccccchHHHHhHHHHHHHHHHHHHHHH----------c----------------------------------cChhH
Confidence 788 89999999999877775554331000 0 01333
Q ss_pred ccchH----HHHhhhhh----hhhhhhhhhhhhcccCcccccccccccccccCCccccccCCCCCCccccccchhHHHHH
Q 001946 727 PHTLP----SALEKVEA----WIFSRIVESIWWQTLTPHMQSAAERVMDRDIGSCSRKNLERTSSSGDQEQINFSLDHWK 798 (992)
Q Consensus 727 ~~tf~----~ALekvEs----WIFSRIVESVWWQ~lTPhMQs~~~~~~~~~~~s~s~k~~~~~~~lgDq~Qg~fSI~LWK 798 (992)
-..++ ..|+.++- .||.-++..+= ..|.|.. |+.. .. +..++. + ....++++-=-
T Consensus 130 y~~ll~e~r~~l~~L~~~~~e~IY~~~i~~lk-k~L~~il--P~~~------~~----~~~k~~--~--~~~~~s~~~Il 192 (386)
T 3mmi_A 130 KDKLTLIYLNDLENETLKVFDKIYSTWLVKFM-KHASAHI--EIFD------MV----LNEKLF--K--NSGDEKFAKLF 192 (386)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH--THHH------HH----TCGGGS--S--SCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHhhc--cccc------cc----cccccc--C--CCCccCHHHHH
Confidence 33333 35676777 88875544431 0111211 1111 01 122221 1 12245544333
Q ss_pred HHHHHHHHHccccCCCCCCCCchHHHHHHHHHHHHHHhHHHHHHHHhcccCCCCCCCCCCCCCCCCcccccCCCCccccc
Q 001946 799 KAFKDACERLCPVRARGHECGCLPLLARLIMEQCVARLDVAMFNAILRESADEIPTDPVSDPISDSKVLPIPAGKSSFGA 878 (992)
Q Consensus 799 ~AF~DA~eRLCP~Ra~ghECGCLpvLarlVMEqcVaRLDVAMFNAILRESa~eiPTDPiSDPI~D~kVLPIPaG~lSFGa 878 (992)
+-|......|+ .|+==|.|.++++.|+..=+++.+||.||-. .+-.+|..
T Consensus 193 ~~L~~~~~~L~-------~~~V~p~li~QlfsQLF~fIna~lFN~LLlR-----------------------r~~cs~s~ 242 (386)
T 3mmi_A 193 TFLNEFDAVLC-------KFQVVDSMHTKIFNDTLKYLNVMLFNDLITK-----------------------CPALNWKY 242 (386)
T ss_dssp HHHHHHHHHHH-------HTTCCHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------CCCBCHHH
T ss_pred HHHHHHHHHHH-------HcCCCHHHHHHHHHHHHHHHhHHHHHHHHcc-----------------------CcccCcch
Confidence 34444444443 3445589999999999999999999999852 45689999
Q ss_pred hhhhhhhhhhhHHHHhhhcCCCCCCCcccCCCCCccccccCCccchhhhhHhhhcccccchhhccCcccccccCCCCChh
Q 001946 879 GAQLKNAIGNWSRWLSDLFGMDDDDSLDNENEHDADDERQDSSFKSFHLLNALSDLMMLPKDLLLSRSIRKEVCPTFGAP 958 (992)
Q Consensus 879 GAQLKnaIgnWSRwLtDlfGid~dds~~~~~~~~~~~~~~~~~~k~F~lLnalSDLlMLPKDML~d~SiRKEVCPs~~lp 958 (992)
|+|+|.-|..--.|+.. |+.. ....|.-|+.++.||-+||.-+.|-.+-.++||.++..
T Consensus 243 G~qIr~NLs~LEeW~~~--~l~~-------------------a~~~L~~L~QA~~LLQ~~K~t~~Di~~i~~~C~~Lsp~ 301 (386)
T 3mmi_A 243 GYEVDRNIERLVSWFEP--RIED-------------------VRPNLIQIIQAVKILQLKISNLNEFKLLFDFWYALNPA 301 (386)
T ss_dssp HHHHHHHHHHHHHHHTT--TSSC-------------------CGGGGHHHHHHHHHHHCCCCCHHHHHHHHTTCCSSCHH
T ss_pred HHHHHhhHHHHHHHHHh--ccHH-------------------HHHHHHHHHHHHHHHccCCCCHHHHHHHHHhcccCCHH
Confidence 99999999999999987 4321 01368889999999999998888877777999999999
Q ss_pred HHHHHhhccCCCCCCCCCCChHHHHhhc
Q 001946 959 LIKRVLDNFCPDEFCPDPIPRVVLEALD 986 (992)
Q Consensus 959 LIkRIL~NF~PDEFcPDPVP~~VlEALn 986 (992)
=|.|||..|.||+++.+|||+.++.++.
T Consensus 302 QL~kIL~~Y~p~~~~E~~V~~e~i~~v~ 329 (386)
T 3mmi_A 302 QIQAILLKYKPANKGEAGVPNEILNYLA 329 (386)
T ss_dssp HHHHHHHTBCCC-----CCCHHHHHHHH
T ss_pred HHHHHHHhCcCCCCCCCCCCHHHHHHHH
Confidence 9999999999999999999999999875
No 3
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=89.02 E-value=4 Score=36.09 Aligned_cols=104 Identities=13% Similarity=0.248 Sum_probs=65.0
Q ss_pred EEEeeeecCCCCcccc--cccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeee-EEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSL--RSLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSl--rSlrSVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~-vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+-.|+.... .+===|.+...++......|.++--++ .=.|||.|.+. +.. +.
T Consensus 25 ~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~v~~-----------~~ 86 (138)
T 1ugk_A 25 VVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTL-------DPAFDETFTFYGIPY-----------TQ 86 (138)
T ss_dssp EEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCS-------SCEEEEEEEEECCCS-----------TT
T ss_pred EEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCC-------CCcEeeEEEEcCcCH-----------HH
Confidence 5777777777765432 111125555655455666666654332 24699999875 221 23
Q ss_pred hcccceeeeecccccc-cccccceeeeccccccccccceeeeeccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMN 141 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n 141 (992)
.+...|.|.+|+-.+- +-.+||.+.|+|+++-.-.+...+-.++-
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~ 132 (138)
T 1ugk_A 87 IQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREII 132 (138)
T ss_dssp GGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECB
T ss_pred hccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhh
Confidence 4567899999986442 22899999999999865555555555553
No 4
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.02 E-value=1.2 Score=39.82 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=47.7
Q ss_pred eEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccce
Q 001946 41 VMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLAT 119 (992)
Q Consensus 41 VllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGt 119 (992)
|.+...++.+....|.++--++ .=.|||.|.++|.. +..+...|.|.||+-.+- +-.+||.
T Consensus 58 v~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~~~~L~~~V~d~d~~~~~~~iG~ 119 (147)
T 2enp_A 58 VKICLLPDQKNSKQTGVKRKTQ-------KPVFEERYTFEIPF-----------LEAQRRTLLLTVVDFDKFSRHCVIGK 119 (147)
T ss_dssp EEEEEETCCSSCEECCCCCSCS-------SCCCCBCCEECCCH-----------HHHHHSEEEEEEECCSTTCCSCCCEE
T ss_pred EEEEEEeCCCcceEeecccCCC-------CCeEeeeEEEEeCh-----------HHhccCEEEEEEEECCCCcCCcEEEE
Confidence 5666666555666666654332 24799999987531 224456899999987542 2379999
Q ss_pred eeecccccc
Q 001946 120 ATIDLADYG 128 (992)
Q Consensus 120 A~inLAd~g 128 (992)
+.|+|+++.
T Consensus 120 ~~i~l~~l~ 128 (147)
T 2enp_A 120 VSVPLCEVD 128 (147)
T ss_dssp EEEETTTSC
T ss_pred EEEechhcC
Confidence 999999874
No 5
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=85.08 E-value=1.7 Score=38.77 Aligned_cols=113 Identities=16% Similarity=0.239 Sum_probs=65.7
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001946 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F 97 (992)
..|+|.+-+-.|+.......- -|.+.. |. ....|.++--++ .=.|||.|.+++.. .
T Consensus 19 L~V~v~~a~~L~~~d~~g~~dpyv~v~~--~~-~~~kT~~~~~t~-------nP~Wne~f~f~v~~-------~------ 75 (148)
T 3kwu_A 19 ISITVVCAQGLQAKDKTGSSDPYVTVQV--GK-TKKRTKTIYGNL-------NPVWEENFHFECHN-------S------ 75 (148)
T ss_dssp EEEEEEEEESCCCCSTTSCCCEEEEEEE--TT-EEEECCCCCSCS-------SCEEEEEEEEEECS-------T------
T ss_pred EEEEEEeeeCCCCCCCCCCcCeEEEEEE--CC-EEEECCccCCCC-------CCCcccEEEEEecC-------C------
Confidence 345666666555543221111 133444 22 334555544332 23699999887641 0
Q ss_pred cccceeeeecccccc------------cccccceeeeccccccccccceeeeeccccccccccCCCceEEEEee
Q 001946 98 LKNCLEFNLYEPRRD------------KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (992)
Q Consensus 98 ~KN~LEfnlye~Rrd------------K~QlLGtA~inLAd~gii~e~~si~~p~n~krS~Rn~~qp~lyv~Iq 159 (992)
...|.|.+|+-... +-.+||.+.|+|.+++ .....-.||. ++......+-.|+|+|.
T Consensus 76 -~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~-~~~~~~~~~G~i~l~l~ 144 (148)
T 3kwu_A 76 -SDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS---GEMDVWYNLD-KRTDKSAVSGAIRLHIS 144 (148)
T ss_dssp -TCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC---SEEEEEEECB-CSSTTCCCCCEEEEEEE
T ss_pred -CCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc---CCCCEEEEcc-cCCCCCCCceEEEEEEE
Confidence 13699999987653 4489999999999983 3344556665 44444455667777764
No 6
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=84.27 E-value=4.4 Score=35.96 Aligned_cols=91 Identities=16% Similarity=0.186 Sum_probs=57.3
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
.|+|.+-+--|+.......- -|.+..-+++.....|.++--++ .=.|||.|.+.|.. ....
T Consensus 37 ~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 98 (143)
T 3f04_A 37 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELG 98 (143)
T ss_dssp EEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCS-------SCEEEEEEEECCCH-----------HHHT
T ss_pred EEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCC-------CCcCcCeEEEeecH-----------hhcC
Confidence 57777777666654322111 24455545555566666654332 23699999887532 2244
Q ss_pred ccceeeeecccccc-cccccceeeecccccc
Q 001946 99 KNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
...|.|.+|+-.+- +-.+||.+.|+|+++-
T Consensus 99 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~ 129 (143)
T 3f04_A 99 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTVD 129 (143)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGCC
T ss_pred CCEEEEEEEeCCCCCCCceEEEEEEEHHHcc
Confidence 47899999986542 3389999999999873
No 7
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=84.15 E-value=7.6 Score=34.08 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=66.8
Q ss_pred EEEEeeeecCCCCcccccccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 19 YQIHIQDIKPWPPSQSLRSLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlrSVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
..|+|.+-+-.|+.......-.-+.-+-+++.....|.++--++ .=.|||.|.+.+.- . +
T Consensus 7 L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-------~------~ 66 (132)
T 3pyc_A 7 IRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTL-------DPKWNQHYDLYVGK-------T------D 66 (132)
T ss_dssp EEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCS-------SCEEEEEEEEEEET-------T------C
T ss_pred EEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCC-------CCCccCEEEEEeCC-------C------C
Confidence 44556555555443332222222333334434556666553222 23699999887631 1 1
Q ss_pred ccceeeeecccccc-c---ccccceeeeccccccccccceeeeecccccc-ccccCCCceEEEEee
Q 001946 99 KNCLEFNLYEPRRD-K---TQLLATATIDLADYGIVKETLSVNAPMNSKR-SFRNTAQPVLFIKIQ 159 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K---~QlLGtA~inLAd~gii~e~~si~~p~n~kr-S~Rn~~qp~lyv~Iq 159 (992)
.|.|.+|+-.+- | -.+||.+.|.|++..-..+......++.-+. .-....+-.|.|.|+
T Consensus 67 --~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 67 --SITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp --CEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEE
T ss_pred --EEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEE
Confidence 399999987653 2 3799999999988755555545556664332 222234667777664
No 8
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=79.33 E-value=5.9 Score=34.15 Aligned_cols=88 Identities=16% Similarity=0.178 Sum_probs=53.0
Q ss_pred EEEeeeecCCCCc---ccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcc
Q 001946 20 QIHIQDIKPWPPS---QSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDAD 95 (992)
Q Consensus 20 ~IhiqeIkPWPpS---qSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~ 95 (992)
.|+|.+-+-.|+. ......- =|.+...+.......|.++--++ .=.|||.|.+++...
T Consensus 6 ~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~~----------- 67 (126)
T 1rlw_A 6 TVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDI-------NPVWNETFEFILDPN----------- 67 (126)
T ss_dssp EEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCS-------SCEEEEEEEEEECTT-----------
T ss_pred EEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCC-------CCcccceEEEEecCC-----------
Confidence 4566666666652 1111111 14555544334555555543222 236999999986221
Q ss_pred hhcccceeeeecccccccccccceeeeccccc
Q 001946 96 TFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (992)
Q Consensus 96 ~F~KN~LEfnlye~RrdK~QlLGtA~inLAd~ 127 (992)
....|.|.+|+-.+-+-.+||.+.|+|.++
T Consensus 68 --~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l 97 (126)
T 1rlw_A 68 --QENVLEITLMDANYVMDETLGTATFTVSSM 97 (126)
T ss_dssp --SCCEEEEEEEECCSSCCEEEEEEEEEGGGS
T ss_pred --CCCEEEEEEEECCCCCCceeEEEEEEHHHc
Confidence 135799999987554448999999999986
No 9
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=78.25 E-value=12 Score=32.88 Aligned_cols=71 Identities=15% Similarity=0.376 Sum_probs=46.8
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccccccccceeeeeccccccccccC
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNT 149 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n~krS~Rn~ 149 (992)
=.|||.|.+++. + . ...|.|.+|+-.+- +-.+||.+.|+|.++- .....-+||.- +..+..
T Consensus 58 P~wne~f~f~~~---~-------~----~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~---~~~~~w~~L~~-~~~~~~ 119 (133)
T 2ep6_A 58 PEWNKVFTFPIK---D-------I----HDVLEVTVFDEDGDKPPDFLGKVAIPLLSIR---DGQPNCYVLKN-KDLEQA 119 (133)
T ss_dssp CCCCEEEEEEES---C-------T----TCEEEEEEEEEETTEEEEECCBCEEEGGGCC---SSCCEECCCBC-SCTTSC
T ss_pred CccccEEEEEec---C-------C----CCEEEEEEEECCCCCCCCeeEEEEEEHHHcc---CCCceEEEeec-CCCCCc
Confidence 369999999873 1 1 24699999987553 3389999999999973 22234455542 222345
Q ss_pred CCceEEEEee
Q 001946 150 AQPVLFIKIQ 159 (992)
Q Consensus 150 ~qp~lyv~Iq 159 (992)
.+-.|.|+|+
T Consensus 120 ~~G~i~l~i~ 129 (133)
T 2ep6_A 120 FKGVIYLEMD 129 (133)
T ss_dssp CSSEEEEEEE
T ss_pred cceEEEEEEE
Confidence 5677777765
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=77.99 E-value=12 Score=34.70 Aligned_cols=76 Identities=14% Similarity=0.262 Sum_probs=45.9
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccccccccee-----eeecccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLS-----VNAPMNSKR 144 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii~e~~s-----i~~p~n~kr 144 (992)
=.|||.|.+.|. . ....|.|.+|+-.+- +-.+||.+.|+|+++-.-..... .-.||.-+
T Consensus 59 P~Wne~f~f~v~------~--------~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~- 123 (176)
T 3m7f_B 59 PKWNEEILFRVL------P--------QRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPR- 123 (176)
T ss_dssp CEEEEEEEEEEC------T--------TTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCS-
T ss_pred CcccceEEEEEc------C--------CCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEcccc-
Confidence 469999988764 1 114799999986443 33899999999998754332211 34566432
Q ss_pred ccccCCCceEEEEeeec
Q 001946 145 SFRNTAQPVLFIKIQPA 161 (992)
Q Consensus 145 S~Rn~~qp~lyv~IqP~ 161 (992)
.-+....-.|.|+|.=+
T Consensus 124 ~~~~~~~G~l~l~l~~~ 140 (176)
T 3m7f_B 124 SHKSRVKGYLRLKMTYL 140 (176)
T ss_dssp STTCCCCSEEEEEEEEC
T ss_pred CCCCccCEEEEEEEEEE
Confidence 23444566777766543
No 11
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=77.58 E-value=6.6 Score=34.16 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=53.5
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd--~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+-.|+.......- -|.+...+++ .....|.++--++ .=.|||.|.+.|. .+.
T Consensus 19 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~-------nP~wne~f~f~v~-----------~~~ 80 (138)
T 3n5a_A 19 IVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNL-------NPIFNESFAFDIP-----------TEK 80 (138)
T ss_dssp EEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCS-------SCEEEEEEEEECC-----------GGG
T ss_pred EEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCC-------CCcCcceEEEECC-----------hhh
Confidence 56666666666543321111 1334443322 2345555554332 2379999988743 123
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
.+...|.|.+|+-.+- +-.+||.+.|+|.+.+
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~ 113 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGP 113 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCC
Confidence 4567899999986542 3389999999998744
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=77.18 E-value=3.7 Score=36.84 Aligned_cols=119 Identities=16% Similarity=0.179 Sum_probs=62.0
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCC---CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCc
Q 001946 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGD---RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDA 94 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlr-SVllqWENGd---~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~ 94 (992)
..|+|.+-+-.|+.......- =|.+...+.. .....|.++--++ .=.|||.|.+++.-
T Consensus 22 L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~----------- 83 (153)
T 3b7y_A 22 VRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSL-------NPKWNEEILFRVHP----------- 83 (153)
T ss_dssp EEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCS-------SCCCCEEEEEEECT-----------
T ss_pred EEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCC-------CCCCCCEEEEEecC-----------
Confidence 445566665555543221111 1444443221 1344555443322 24689999887641
Q ss_pred chhcccceeeeecccccc-cccccceeeeccccccccccc-----eeeeeccccccccccCCCceEEEEee
Q 001946 95 DTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKET-----LSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (992)
Q Consensus 95 ~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii~e~-----~si~~p~n~krS~Rn~~qp~lyv~Iq 159 (992)
....|.|.+|+-.+- +-.+||.+.|+|.++---... ...-.||.-++. +...+-.|.|+|+
T Consensus 84 ---~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~-~~~~~G~i~l~l~ 150 (153)
T 3b7y_A 84 ---QQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH-KSRVKGYLRLKMT 150 (153)
T ss_dssp ---TTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST-TCCCCSEEEEEEE
T ss_pred ---CCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC-CCCcceEEEEEEE
Confidence 124799999987553 338999999999987443322 123455544331 2344555655553
No 13
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=76.79 E-value=5.6 Score=36.47 Aligned_cols=91 Identities=12% Similarity=0.152 Sum_probs=55.4
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlrS-VllqWENGd--~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+--|+.......-. |.+...++. .....|.++--+ -.-.|||.|.+++.. ..
T Consensus 40 ~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t-------~nP~wne~f~f~v~~-----------~~ 101 (166)
T 2cm5_A 40 IVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKT-------LNPEFNEEFFYDIKH-----------SD 101 (166)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSC-------SSCEEEEEEEEECCG-----------GG
T ss_pred EEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCC-------CCCcccceEEEEcch-----------Hh
Confidence 567777776766433221121 444443322 345555555322 235799999887632 12
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
.+...|.|.||+-.+- +-.+||.+.|+|.+.|
T Consensus 102 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 134 (166)
T 2cm5_A 102 LAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG 134 (166)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred cCCCEEEEEEEECCCCCCCcEEEeEEEecccCC
Confidence 4456899999987553 3389999999999865
No 14
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=76.56 E-value=17 Score=35.56 Aligned_cols=90 Identities=18% Similarity=0.193 Sum_probs=55.1
Q ss_pred EEEeeeecCCCCccccc-ccceeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 20 QIHIQDIKPWPPSQSLR-SLRSVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlr-SlrSVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
.|+|.+-+-.|+..... +===|.+...+++.....|.++--++ .=.|||.|.+.|.. +..+
T Consensus 22 ~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~-------nP~wne~f~f~v~~-----------~~~~ 83 (284)
T 2r83_A 22 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELA 83 (284)
T ss_dssp EEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCS-------SCEEEEEEEECCCG-----------GGCT
T ss_pred EEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCC-------CCeeCceEEEEech-----------HHhC
Confidence 45666666666533211 11125556655444555565554332 24699999987531 1244
Q ss_pred ccceeeeecccccc-cccccceeeeccccc
Q 001946 99 KNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
...|.|.+|+-.+- +-.+||.+.|+|.++
T Consensus 84 ~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l 113 (284)
T 2r83_A 84 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 113 (284)
T ss_dssp TCEEEEEEEECCSSSCCCEEEEEEEEGGGC
T ss_pred cCEEEEEEEECCCCCCCceeEEEEEcchhc
Confidence 56899999986542 338999999999986
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=75.96 E-value=6.7 Score=35.44 Aligned_cols=90 Identities=17% Similarity=0.188 Sum_probs=56.0
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
.|+|.+-+--|+.......- =|.+..-++++....|.++--++ .=.|||.|.+.|.. +...
T Consensus 45 ~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 106 (152)
T 1rsy_A 45 LVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTL-------NPVFNEQFTFKVPY-----------SELG 106 (152)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCS-------SCEEEEEEEECCCH-----------HHHT
T ss_pred EEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCC-------CCcCcccEEEeecH-----------HHcC
Confidence 56666666666644221111 14445545455566666654332 35799999886531 1234
Q ss_pred ccceeeeecccccc-cccccceeeeccccc
Q 001946 99 KNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
...|.|.||+-.+- +-.+||.+.|+|+++
T Consensus 107 ~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 136 (152)
T 1rsy_A 107 GKTLVMAVYDFDRFSKHDIIGEFKVPMNTV 136 (152)
T ss_dssp TCEEEEEEEECCSSSCCEEEEEEEEEGGGC
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEchhc
Confidence 57899999987542 338999999999986
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.66 E-value=5.3 Score=35.45 Aligned_cols=92 Identities=15% Similarity=0.178 Sum_probs=55.1
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
.|+|.+-+-.|+.......- =|.+...+++.....|.++--++ .=.|||.|.+++. ..+...
T Consensus 29 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~----------~~~~~~ 91 (141)
T 2d8k_A 29 TVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNL-------NPHWNETFLFEGF----------PYEKVV 91 (141)
T ss_dssp EEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCS-------SCCCCEEEEECSC----------CHHHHT
T ss_pred EEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCC-------CCccccEEEECcc----------CHHHcc
Confidence 46666666666543221111 25555554444555665553222 2468999987631 112234
Q ss_pred ccceeeeecccccc-cccccceeeecccccc
Q 001946 99 KNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
...|.|.+|+-.+- |-.+||.+.|+|.++-
T Consensus 92 ~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~ 122 (141)
T 2d8k_A 92 QRILYLQVLDYDRFSRNDPIGEVSIPLNKVD 122 (141)
T ss_dssp TSEEEEEEEECCSSSSCEEEEEEEEETTTSC
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEhhhhc
Confidence 56799999987552 3389999999999873
No 17
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=75.41 E-value=3.7 Score=36.01 Aligned_cols=72 Identities=14% Similarity=0.198 Sum_probs=45.9
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccccccccceeeeeccccccccccC
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNT 149 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii~e~~si~~p~n~krS~Rn~ 149 (992)
=.|||.|.+++. + ....|.|.+|+-.+- +-.+||.+.|+|.++---.+......|+. +. ..
T Consensus 56 P~Wne~f~f~v~---~-----------~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~--~~--~~ 117 (136)
T 1wfj_A 56 PEWNETFIFTVS---E-----------GTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV--KD--EE 117 (136)
T ss_dssp CEEEEEEEEEEE---S-----------SCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE--ET--TE
T ss_pred CccCcEEEEEEC---C-----------CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee--cC--Cc
Confidence 479999999876 1 234799999987542 33899999999998721122233445554 22 23
Q ss_pred CCceEEEEeee
Q 001946 150 AQPVLFIKIQP 160 (992)
Q Consensus 150 ~qp~lyv~IqP 160 (992)
.+-.|.|.|+=
T Consensus 118 ~~G~i~l~l~~ 128 (136)
T 1wfj_A 118 YKGEIWVALSF 128 (136)
T ss_dssp EEEEEEEEEEE
T ss_pred cCEEEEEEEEE
Confidence 34556666543
No 18
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=75.22 E-value=11 Score=33.15 Aligned_cols=88 Identities=16% Similarity=0.198 Sum_probs=50.9
Q ss_pred EEEEeeeecCCCCcccccccce-eEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001946 19 YQIHIQDIKPWPPSQSLRSLRS-VMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlrS-VllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F 97 (992)
..|+|.+-+-.|+... ..... |.+... |. ...|.++--+ -.=.|||.|.+.+..... -
T Consensus 9 L~v~v~~a~~L~~~~~-g~~dpyv~v~~~-~~--~~kT~v~~~t-------~nP~wne~f~f~v~~~~~----------~ 67 (140)
T 2dmh_A 9 LRVIVESASNIPKTKF-GKPDPIVSVIFK-DE--KKKTKKVDNE-------LNPVWNEILEFDLRGIPL----------D 67 (140)
T ss_dssp EEEEEEEEESCCCCSS-SCCCEEEEEECS-SC--EEECCCCCSC-------SSCEEEEEEEEECSSCCC----------C
T ss_pred EEEEEEEeeCCCCCCC-CCCCeEEEEEEC-CE--eEEeeeecCC-------CCCccCcEEEEEeccccc----------C
Confidence 4456666665565443 22222 334433 33 2555544322 134799999887632110 1
Q ss_pred cccceeeeecccccc-cccccceeeeccccc
Q 001946 98 LKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 98 ~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
....|.|.+|+-.+- +-.+||.+.|+|.++
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l 98 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDL 98 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGT
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHh
Confidence 246799999987543 338999999999986
No 19
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=74.21 E-value=1.9 Score=38.70 Aligned_cols=46 Identities=13% Similarity=0.179 Sum_probs=34.3
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
=.|||.|.+++.. +..+...|.|.||+-.+- +-.+||.+.|+|+++
T Consensus 72 P~wnE~f~f~v~~-----------~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l 118 (138)
T 1wfm_A 72 TTWEEGLVLPLAE-----------EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGT 118 (138)
T ss_dssp EECSSCEEEECCT-----------TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSS
T ss_pred CcCCceEEEEecH-----------HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccc
Confidence 4799999987531 123456799999987442 338999999999997
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=71.74 E-value=1.4 Score=41.09 Aligned_cols=46 Identities=24% Similarity=0.403 Sum_probs=35.7
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
=.|||.|.++|.. +..+...|+|.+|+-.+. |-.+||.+.|+|+++
T Consensus 94 P~wnE~F~f~v~~-----------~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l 140 (155)
T 2z0u_A 94 LVFNEVFWVSMSY-----------PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEV 140 (155)
T ss_dssp EEEEEEEEEECCH-----------HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTS
T ss_pred CccccEEEEEcCH-----------HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHc
Confidence 4799999988532 234667899999987543 338999999999987
No 21
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=69.95 E-value=8 Score=35.08 Aligned_cols=91 Identities=15% Similarity=0.165 Sum_probs=53.4
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCC--CCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDR--NSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~--~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+--|+.......- =|.+...++.+ ....|.++--++ .=.|||.|.+.|.. +.
T Consensus 28 ~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~ 89 (159)
T 1tjx_A 28 TVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTL-------NPYYNESFSFEVPF-----------EQ 89 (159)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCS-------SCEEEEEEEEECCG-----------GG
T ss_pred EEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCC-------CCcccceEEEEcCH-----------HH
Confidence 45666666666544321111 13444433221 244555443222 24799999887532 12
Q ss_pred hcccceeeeecccccc-cccccceeeecccccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
.+...|.|.||+-.+- +-.+||.+.|+|...|
T Consensus 90 l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 122 (159)
T 1tjx_A 90 IQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 122 (159)
T ss_dssp GGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH
T ss_pred hCCcEEEEEEEECCCCCCCceEEEEEECCCCCC
Confidence 4556799999987542 3389999999999765
No 22
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=69.81 E-value=26 Score=30.57 Aligned_cols=91 Identities=25% Similarity=0.360 Sum_probs=52.8
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeec--CCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQN--GDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlrS-VllqWEN--Gd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+--|+.......-. |.+..-. +......|.++--++- =.|||.|.+++.- .+.
T Consensus 24 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~n-------P~wne~f~f~~~~----------~~~ 86 (141)
T 1v27_A 24 IVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLE-------PKWNQTFIYSPVH----------RRE 86 (141)
T ss_dssp EEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSS-------CCCCCCCEECSCC----------TTG
T ss_pred EEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCC-------CccccEEEEccCC----------HHH
Confidence 355666555555432211111 2333222 2344556665544332 3699999887311 123
Q ss_pred hcccceeeeeccccccc---ccccceeeeccccc
Q 001946 97 FLKNCLEFNLYEPRRDK---TQLLATATIDLADY 127 (992)
Q Consensus 97 F~KN~LEfnlye~RrdK---~QlLGtA~inLAd~ 127 (992)
.....|.|.+|+-.+-. -.+||.+.|+|++.
T Consensus 87 ~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l 120 (141)
T 1v27_A 87 FRERMLEITLWDQARVREEESEFLGEILIELETA 120 (141)
T ss_dssp GGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGC
T ss_pred hcCCEEEEEEEECCCCcCCCCceEEEEEEEcccc
Confidence 45578999999876633 48999999999985
No 23
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=66.86 E-value=13 Score=33.14 Aligned_cols=47 Identities=19% Similarity=0.295 Sum_probs=34.6
Q ss_pred EEeecceeee-EEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001946 71 IEFNESFRLR-VTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 71 iEFnEsFrL~-vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
=.|||.|.++ +.. +..+...|.|.+|+-.+- +-++||.+.|+|+++-
T Consensus 69 P~wnE~f~f~~v~~-----------~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~ 117 (134)
T 2b3r_A 69 PTFNEMLVYSGYSK-----------ETLRQRELQLSVLSAESLRENFFLGGITLPLKDFN 117 (134)
T ss_dssp CEEEEEEEEESCCH-----------HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSC
T ss_pred CCCccEEEECCcCH-----------HHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhcc
Confidence 3699999887 532 233556899999987542 2389999999999873
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=66.39 E-value=24 Score=31.64 Aligned_cols=89 Identities=18% Similarity=0.301 Sum_probs=51.3
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlrS-VllqWENGd--~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+--|+.......-. |.+...+.. .....|.++--++ .=.|||.|.+++.- .+
T Consensus 34 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~----------~~- 95 (149)
T 1a25_A 34 IVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSL-------NPEWNETFRFQLKE----------SD- 95 (149)
T ss_dssp EEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCS-------SCEEEEEEEEECCS----------GG-
T ss_pred EEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCC-------CCcCCcEEEEEecc----------cc-
Confidence 456666666665443221122 344443321 3344555443222 24799999887631 01
Q ss_pred hcccceeeeecccccc-cccccceeeeccccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLADY 127 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~ 127 (992)
....|.|.||+-.+- +-.+||.+.|+|+++
T Consensus 96 -~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l 126 (149)
T 1a25_A 96 -KDRRLSVEIWDWDLTSRNDFMGSLSFGISEL 126 (149)
T ss_dssp -GGCEEEEEEEECCSSSCCEEEEEEEEEHHHH
T ss_pred -CCCEEEEEEEECCCCCCCCEEEEEEEEHHHh
Confidence 124699999987543 338999999999986
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=64.18 E-value=3.6 Score=36.92 Aligned_cols=47 Identities=17% Similarity=0.403 Sum_probs=34.4
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
=.|||.|.++|.. +..+...|.|.+|+-.+- +-.+||.+.|+|+++-
T Consensus 74 P~wne~f~f~v~~-----------~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~ 121 (148)
T 3fdw_A 74 PLYDETLRYEIPE-----------SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWK 121 (148)
T ss_dssp CEEEEEEEEECCS-----------TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHH
T ss_pred CcEeeEEEEEeCh-----------hHhCceEEEEEEEECCCCcCCcEEEEEEEEccccc
Confidence 3699999887421 224567799999986442 2389999999999873
No 26
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=62.61 E-value=4.6 Score=36.31 Aligned_cols=89 Identities=12% Similarity=0.218 Sum_probs=51.2
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCC--CCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcch
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRN--SGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADT 96 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~--SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~ 96 (992)
.|+|.+-+-.|+.......- =|.+..-++.+. ...|.++--++ .=.|||.|.++|.. +.
T Consensus 33 ~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~ 94 (153)
T 1w15_A 33 TVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTP-------NAVFNELFVFDIPC-----------ES 94 (153)
T ss_dssp EEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCS-------SEEEEEEEEEECCS-----------SS
T ss_pred EEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCC-------CCeecceEEEECCH-----------HH
Confidence 56777777777644221111 144444333221 34555443222 36799999987531 12
Q ss_pred hcccceeeeecccccc-cccccceeeecccc
Q 001946 97 FLKNCLEFNLYEPRRD-KTQLLATATIDLAD 126 (992)
Q Consensus 97 F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd 126 (992)
.+...|.|.||+-.+- +-.+||.+.|+|.+
T Consensus 95 l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~ 125 (153)
T 1w15_A 95 LEEISVEFLVLDSERGSRNEVIGRLVLGATA 125 (153)
T ss_dssp STTEEEEEEEEECCTTSCCEEEEEEEESTTC
T ss_pred hCceEEEEEEEeCCCCCCCcEEEEEEECCCC
Confidence 3457899999987542 33899999999987
No 27
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=62.03 E-value=2.9 Score=36.98 Aligned_cols=92 Identities=23% Similarity=0.317 Sum_probs=53.9
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecCCC-----------CCCCcccccCCCcccccCceEEeecceeee-EEEEe
Q 001946 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDR-----------NSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLR 85 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~-----------~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~-vtl~~ 85 (992)
..|+|.+-+--|+.......- =|.+...++.. ....|.++--++ .=.|||.|.++ +..
T Consensus 20 L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~v~~-- 90 (142)
T 1rh8_A 20 LIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSL-------NPEWNQTVIYKSISM-- 90 (142)
T ss_dssp EEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHH-------SCEEEEEEEECSCCH--
T ss_pred EEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCC-------CCCCCCEEEECCcCH--
Confidence 356777776666644221111 14444444332 134454443211 24799999875 322
Q ss_pred ecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001946 86 DMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 86 e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
+......|.|.+|+-.+- +-.+||.+.|+|.++.
T Consensus 91 ---------~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~ 125 (142)
T 1rh8_A 91 ---------EQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTS 125 (142)
T ss_dssp ---------HHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCG
T ss_pred ---------HHccCCEEEEEEEECCCCCCCceEEEEEEeccccc
Confidence 223456899999987542 3389999999999864
No 28
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=61.93 E-value=9.7 Score=36.23 Aligned_cols=65 Identities=20% Similarity=0.345 Sum_probs=43.9
Q ss_pred EeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-ccccccceeeecccccccc---ccceeeeeccccccccc
Q 001946 72 EFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIV---KETLSVNAPMNSKRSFR 147 (992)
Q Consensus 72 EFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rr-dK~QlLGtA~inLAd~gii---~e~~si~~p~n~krS~R 147 (992)
.|||.|.++|. + ...|+|.+|+-.+ .+-.+||.+.|+|.++--- .+....-+||.
T Consensus 86 ~WNE~F~f~v~---~------------~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~------ 144 (157)
T 2fk9_A 86 TYNEEFCANVT---D------------GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLE------ 144 (157)
T ss_dssp EEEEEEEEEEE---E------------ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECB------
T ss_pred ccCcEEEEEcC---C------------CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECC------
Confidence 79999999864 1 1369999998533 2238999999999985211 12344445552
Q ss_pred cCCCceEEEEee
Q 001946 148 NTAQPVLFIKIQ 159 (992)
Q Consensus 148 n~~qp~lyv~Iq 159 (992)
.+-.|+|+|+
T Consensus 145 --~~G~i~l~l~ 154 (157)
T 2fk9_A 145 --PEGKVFVVIT 154 (157)
T ss_dssp --SSCEEEEEEE
T ss_pred --CCcEEEEEEE
Confidence 2778888876
No 29
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=61.06 E-value=17 Score=32.15 Aligned_cols=91 Identities=18% Similarity=0.240 Sum_probs=53.9
Q ss_pred EEEeeeecCCCCcccccccce-eEEEeecCC--CCCCCcccccCCCcccccCceEEeecceeee-EEEEeecccCCCCcc
Q 001946 20 QIHIQDIKPWPPSQSLRSLRS-VMIQWQNGD--RNSGSTKTVGPSLGSVIGEGKIEFNESFRLR-VTLLRDMNVKNKDAD 95 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlrS-VllqWENGd--~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~-vtl~~e~s~kg~~~~ 95 (992)
.|+|.+-+-.|+.......-. |.+..-++. .....|.++--++ .-.|||.|.++ +. .+
T Consensus 32 ~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~~-----------~~ 93 (142)
T 2chd_A 32 QCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTR-------NPVWNETLQYHGIT-----------EE 93 (142)
T ss_dssp EEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCS-------SCEEEEEEEEESCC-----------HH
T ss_pred EEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCC-------CCcCcCEEEEcccC-----------HH
Confidence 567777777776443221121 444444322 2344555443222 25799998876 21 12
Q ss_pred hhcccceeeeecccccc-cccccceeeecccccc
Q 001946 96 TFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 96 ~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
..+...|.|.||+-.+- +-.+||.+.|+|.++.
T Consensus 94 ~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~ 127 (142)
T 2chd_A 94 DMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLK 127 (142)
T ss_dssp HHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCC
T ss_pred HccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcC
Confidence 34456899999987542 2389999999999864
No 30
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.68 E-value=21 Score=31.51 Aligned_cols=92 Identities=16% Similarity=0.155 Sum_probs=53.1
Q ss_pred EEEeeeecCCCCcccccccceeEEEeecCCC--CCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchh
Q 001946 20 QIHIQDIKPWPPSQSLRSLRSVMIQWQNGDR--NSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTF 97 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlrSVllqWENGd~--~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F 97 (992)
.|+|.+-+--|+.....+===|.+..-.+.+ ....|.++--++ .=.|||.|.++|.. ...
T Consensus 27 ~v~v~~a~~L~~~d~~g~dpyv~v~l~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l 88 (142)
T 2dmg_A 27 IVVVHACRNLIAFSEDGSDPYVRMYLLPDKRRSGRRKTHVSKKTL-------NPVFDQSFDFSVSL-----------PEV 88 (142)
T ss_dssp EEEEEEEECCCCSSTTCCCEEEEEEEESCCCSSSCEECCCCCSCS-------SCEEEEEEEECCCH-----------HHH
T ss_pred EEEEEEeECCCCCCCCCCCeeEEEEEEcCCCCCCcccCCccCCCC-------CCCcCceEEEEecH-----------HHh
Confidence 3555555555543322111124455544333 444555543222 24799999887532 123
Q ss_pred cccceeeeecccccc-c-c-cccceeeeccccccc
Q 001946 98 LKNCLEFNLYEPRRD-K-T-QLLATATIDLADYGI 129 (992)
Q Consensus 98 ~KN~LEfnlye~Rrd-K-~-QlLGtA~inLAd~gi 129 (992)
+...|.|.||+-.+- + - .+||.+.|+|++...
T Consensus 89 ~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~ 123 (142)
T 2dmg_A 89 QRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEEL 123 (142)
T ss_dssp HHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTT
T ss_pred CcCEEEEEEEECCCccccCCcEEEEEEEecccccc
Confidence 455899999987542 2 2 599999999998754
No 31
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=57.62 E-value=7 Score=33.83 Aligned_cols=93 Identities=25% Similarity=0.335 Sum_probs=51.6
Q ss_pred EEEEeeeecCCCCcccccccc-eeEEEeecC--CCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcc
Q 001946 19 YQIHIQDIKPWPPSQSLRSLR-SVMIQWQNG--DRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDAD 95 (992)
Q Consensus 19 y~IhiqeIkPWPpSqSlrSlr-SVllqWENG--d~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~ 95 (992)
..|+|.+-+--|+.......- =|.+..-.+ ......|.++--++ .=.|||.|.+++.- .+
T Consensus 20 L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~-------nP~wne~f~f~~~~----------~~ 82 (129)
T 2bwq_A 20 LIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTL-------EPKWNQTFIYSPVH----------RR 82 (129)
T ss_dssp EEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBS-------SCEEEEEEEECSCC----------GG
T ss_pred EEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCC-------CCccccEEEEccCC----------HH
Confidence 356666666666543221111 133333222 23444555443322 24699999887411 12
Q ss_pred hhcccceeeeeccccccc---ccccceeeecccccc
Q 001946 96 TFLKNCLEFNLYEPRRDK---TQLLATATIDLADYG 128 (992)
Q Consensus 96 ~F~KN~LEfnlye~RrdK---~QlLGtA~inLAd~g 128 (992)
......|.|.+|+-.+-. -.+||.+.|+|++.-
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~ 118 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETAL 118 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccC
Confidence 345568999999876532 479999999999853
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=56.21 E-value=4.6 Score=37.57 Aligned_cols=44 Identities=14% Similarity=0.179 Sum_probs=33.2
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeec-ccccc-cccccceeeecccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLY-EPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnly-e~Rrd-K~QlLGtA~inLAd~g 128 (992)
=.|||.|.+++.. ....|.|.|| +-.+- +-.+||.+.|+|+++-
T Consensus 81 P~wne~f~f~v~~--------------~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~ 126 (171)
T 2q3x_A 81 PLYQQSLVFDESP--------------QGKVLQVIVWGDYGRMDHKCFMGVAQILLEELD 126 (171)
T ss_dssp CEEEEEEECSSCC--------------TTEEEEEEEEEECSTTCSSEEEEEEEECGGGSC
T ss_pred CCCCcEEEEEecC--------------CCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcc
Confidence 4799999988631 2367999999 75442 2389999999999873
No 33
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=55.91 E-value=7.8 Score=34.37 Aligned_cols=42 Identities=14% Similarity=0.270 Sum_probs=31.8
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-ccccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rr-dK~QlLGtA~inLAd~ 127 (992)
=.|||.|.+++.- . ..|+|.+|+-.+ .+-.+||.+.|+|.++
T Consensus 63 P~WnE~f~f~v~~---~------------~~L~~~V~d~d~~~~dd~iG~~~i~l~~l 105 (136)
T 1gmi_A 63 PAWHDEFVTDVCN---G------------RKIELAVFHDAPIGYDDFVANCTIQFEEL 105 (136)
T ss_dssp CEEEEEEEEEEEE---E------------CEEEEEEEECCSSSSCEEEEEEEEEHHHH
T ss_pred CccCCEEEEEecC---C------------CEEEEEEEeCCCCCCCCEEEEEEEEHHHh
Confidence 3699999998631 0 479999998643 2237999999999875
No 34
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=54.23 E-value=14 Score=34.96 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=46.2
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccccc----ccceeeeeccccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYGIV----KETLSVNAPMNSKRS 145 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~gii----~e~~si~~p~n~krS 145 (992)
=.|||.|.++|. . ...|.|.||+-.+- +-.+||.+.|+|.++--- .+.+.+..++.-++.
T Consensus 81 P~Wne~f~f~v~------~---------~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~ 145 (173)
T 2nq3_A 81 PKWKQPLTVIVT------P---------VSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKE 145 (173)
T ss_dssp CEEEEEEEEEEC------T---------TCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSC
T ss_pred CeECCEEEEEeC------C---------CCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCC
Confidence 479999999761 0 34699999987543 337999999999986221 122344555554421
Q ss_pred cccCCCceEEEEeeec
Q 001946 146 FRNTAQPVLFIKIQPA 161 (992)
Q Consensus 146 ~Rn~~qp~lyv~IqP~ 161 (992)
....+-.|.|.+.-+
T Consensus 146 -~~~~~G~L~v~l~~l 160 (173)
T 2nq3_A 146 -PTETIGDLSICLDGL 160 (173)
T ss_dssp -TTSEEEEEEEEEESE
T ss_pred -CCcccEEEEEEEeee
Confidence 223355566655443
No 35
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=53.86 E-value=33 Score=29.81 Aligned_cols=77 Identities=17% Similarity=0.271 Sum_probs=46.1
Q ss_pred CCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001946 50 RNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 50 ~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
.....|.++--++ .=.|||.|.+++.. . + ....|.|.+|+-.+- +-.+||.+.|+|++.-
T Consensus 52 ~~~~kT~~~~~t~-------nP~wne~f~f~~~~-------~---~--~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~ 112 (137)
T 3rdl_A 52 ESKQKTKTIRSTL-------NPQWNESFTFKLKP-------S---D--KDRRLSVEIWDWDRTTRNDFMGSLSFGVSELM 112 (137)
T ss_dssp CCCEECCCCCSCS-------SCEEEEEEEEECCG-------G---G--GGCEEEEEEEECCSSSCCEEEEEEEEEHHHHH
T ss_pred CeeecCceEcCCC-------CCCcccEEEEEcCc-------h---h--cCCEEEEEEEECCCCCCCceEEEEEEeHHHhc
Confidence 3445555554332 24699999887541 0 1 123699999986442 3389999999999872
Q ss_pred ccccceeeeeccccccccc
Q 001946 129 IVKETLSVNAPMNSKRSFR 147 (992)
Q Consensus 129 ii~e~~si~~p~n~krS~R 147 (992)
......-.+|.-+++-+
T Consensus 113 --~~~~~~W~~L~~~~~g~ 129 (137)
T 3rdl_A 113 --KMPASGWYKLLNQEEGE 129 (137)
T ss_dssp --HSCEEEEEECBCHHHHT
T ss_pred --cCccCceEECcCccccc
Confidence 22244455555444433
No 36
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=53.41 E-value=81 Score=31.53 Aligned_cols=89 Identities=24% Similarity=0.306 Sum_probs=51.7
Q ss_pred EEEeeeecCCCCcccccccc-eeEEEeecCCCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecccCCCCcchhc
Q 001946 20 QIHIQDIKPWPPSQSLRSLR-SVMIQWQNGDRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMNVKNKDADTFL 98 (992)
Q Consensus 20 ~IhiqeIkPWPpSqSlrSlr-SVllqWENGd~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s~kg~~~~~F~ 98 (992)
.|+|.+-+--|+.......- =|.+....+......|.++--++ .=.|||.|.+++.. +..+
T Consensus 23 ~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~-------nP~wne~f~f~v~~-----------~~l~ 84 (296)
T 1dqv_A 23 VVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTL-------NPIFNETFQFSVPL-----------AELA 84 (296)
T ss_dssp EEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCS-------SCEEEEEEEEECCG-----------GGGS
T ss_pred EEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCC-------CCcEeeEEEEEecH-----------HHhc
Confidence 56777766666543221111 14444433334455565543222 24799999987531 1234
Q ss_pred ccceeeeecccccc-cccccceeeec-ccc
Q 001946 99 KNCLEFNLYEPRRD-KTQLLATATID-LAD 126 (992)
Q Consensus 99 KN~LEfnlye~Rrd-K~QlLGtA~in-LAd 126 (992)
...|.|.||+-.+- +-.+||.+.|+ |.+
T Consensus 85 ~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~ 114 (296)
T 1dqv_A 85 QRKLHFSVYDFDRFSRHDLIGQVVLDNLLE 114 (296)
T ss_dssp SCCCEEEEEECCSSSCCCEEEEEECCCTTG
T ss_pred CCEEEEEEEEcCCCCCCceEEEEEeccccc
Confidence 45799999987542 33899999995 443
No 37
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=50.75 E-value=11 Score=36.56 Aligned_cols=121 Identities=17% Similarity=0.252 Sum_probs=69.3
Q ss_pred eEEEEEEEeeeecCCCCcccccccceeEEEeecCCCCCCCcccccCCCcccc--cCceEEeecceeeeEEEEeecccCCC
Q 001946 15 IHVDYQIHIQDIKPWPPSQSLRSLRSVMIQWQNGDRNSGSTKTVGPSLGSVI--GEGKIEFNESFRLRVTLLRDMNVKNK 92 (992)
Q Consensus 15 v~vdy~IhiqeIkPWPpSqSlrSlrSVllqWENGd~~SGsT~~V~PSlgs~v--G~GkiEFnEsFrL~vtl~~e~s~kg~ 92 (992)
.|+-..++|+..+-=|..- =| +-+|.+ .|..-.- -++ .+-...|||.|+.|+.= ..
T Consensus 19 ~~msL~V~l~~a~~Lpg~~-Dp-~akv~F---Rg~k~kT----------kvi~~~~~npvfnE~F~wpl~~----~l--- 76 (144)
T 3l9b_A 19 SHMALIVHLKTVSELRGRA-DR-IAKVTF---RGQSFYS----------RVLENCEDVADFDETFRWPVAS----SI--- 76 (144)
T ss_dssp CCEEEEEEEEEEESCCSCE-EE-EEEEEE---TTEEEEC----------CCEEEECSCEEEEEEEEEEESS----CC---
T ss_pred CcEEEEEEEEEecCCCCCC-CC-eEEEEE---eccceee----------EEeccCCCCceEcceEEecCCC----CC---
Confidence 4677777777777766411 11 112222 3332222 233 24558899999998752 11
Q ss_pred Ccchhcccceeeeeccccc-ccccccceeeeccccccccccceeeeeccccccccccCCCceEEEEeeecc
Q 001946 93 DADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQPAE 162 (992)
Q Consensus 93 ~~~~F~KN~LEfnlye~Rr-dK~QlLGtA~inLAd~gii~e~~si~~p~n~krS~Rn~~qp~lyv~IqP~~ 162 (992)
=.--+|++-||+-.| -+-.+||+++|-|-+.-. .....++.||--.+.-.-.++-.|=|.-||.+
T Consensus 77 ----d~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~-~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 77 ----DRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVE-ENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp ----CTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHH-HSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred ----CCCCEEEEEEEECccccCCCEEEEEEEEhHHhcc-CCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 122479999998755 233799999999977533 23555666665444333333444555556654
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=47.22 E-value=5.5 Score=39.91 Aligned_cols=48 Identities=8% Similarity=0.097 Sum_probs=36.7
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccccc-ccccceeeeccccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDK-TQLLATATIDLADYGI 129 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~RrdK-~QlLGtA~inLAd~gi 129 (992)
-.|||.|.++|.. +.++...|.|.+|+-.+.. -++||.+.|+|.+.|.
T Consensus 202 P~wne~f~f~v~~-----------~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~ 250 (296)
T 1dqv_A 202 PTYNEALVFDVAP-----------ESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP 250 (296)
T ss_dssp CEEEECCCCCCCS-----------GGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH
T ss_pred CeECceEEEEcCH-----------HHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc
Confidence 4799999887532 2345568999999876643 3899999999998865
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=45.99 E-value=13 Score=33.60 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=31.8
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccccccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~RrdK~QlLGtA~inLAd~ 127 (992)
=+|||.|.+.+. + . ...|.|.+|+-.-.+-.+||.+.|+|.+.
T Consensus 46 P~WnE~f~f~v~---~----~-------~~~L~~~V~D~d~~~dd~iG~~~i~l~~l 88 (131)
T 2cjt_A 46 PSWEQDFMFEIN---R----L-------DLGLTVEVWNKGLIWDTMVGTVWIPLRTI 88 (131)
T ss_dssp CEEEEEEEEEEC---C----C-------SSEEEEEEEECCSSCEEEEEEEEEEGGGS
T ss_pred ceECCEEEEEEe---C----C-------CCeEEEEEEECCCCCCCeEEEEEEEHHHh
Confidence 589999999875 1 0 12499999986422238999999999874
No 40
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=45.73 E-value=52 Score=29.73 Aligned_cols=45 Identities=16% Similarity=0.248 Sum_probs=32.3
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeeccccc-cc-ccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRR-DK-TQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rr-dK-~QlLGtA~inLAd~ 127 (992)
=.|||.|.+++.. ....+ .|.|.+|+-.+ .+ -.+||.+.|+|.++
T Consensus 76 P~wne~f~f~v~~-----------~~~~~-~L~i~V~d~d~~~~~d~~lG~~~i~l~~l 122 (153)
T 3fbk_A 76 PAFHEHFFFPVQE-----------EDDQK-RLLVTVWNRASQSRQSGLIGCMSFGVKSL 122 (153)
T ss_dssp CEEEEEEEEECCG-----------GGTTS-EEEEEEEECCSSGGGCEEEEEEEEEHHHH
T ss_pred CccccEEEEeccc-----------HHhCC-EEEEEEEeCCCCCCCCcEEEEEEEEHHHh
Confidence 4799999887531 11222 49999998755 23 37999999999984
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=45.24 E-value=14 Score=36.27 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=34.9
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccc-cccccceeeecccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRD-KTQLLATATIDLADYG 128 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~Rrd-K~QlLGtA~inLAd~g 128 (992)
=.|||.|.+++.. +.++...|.|.+|+-.+- +-.+||.+.|+|...|
T Consensus 200 P~wne~f~f~v~~-----------~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~ 247 (284)
T 2r83_A 200 PYYNESFSFEVPF-----------EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG 247 (284)
T ss_dssp CEEEEEEEEECCT-----------TTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCH
T ss_pred CEEceeEEEeCCH-----------HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCC
Confidence 4799998887521 235566899999987653 3389999999998644
No 42
>2lme_A Adhesin YADA; trimeric autotransporter, membrane protein, cell adhesion; NMR {Yersinia enterocolitica subsp}
Probab=43.02 E-value=25 Score=31.94 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=28.8
Q ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Q 001946 563 VAESKIQQLEHKINMLETELREAAAIEASLYSV 595 (992)
Q Consensus 563 ~~~~ki~ele~rie~LE~ELREaAAlEvsLYSV 595 (992)
...+++.+|..||++++.|+|-.+|.=+||=.+
T Consensus 13 ~~~~~~~~l~~~i~~~~~~~~~g~A~a~A~a~l 45 (105)
T 2lme_A 13 KGAHKFRQLDNRLDKLDTRVDKGLASSAALNSL 45 (105)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 356899999999999999999999998888554
No 43
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=40.65 E-value=14 Score=35.05 Aligned_cols=43 Identities=12% Similarity=0.185 Sum_probs=32.0
Q ss_pred EEeecceeeeEEEEeecccCCCCcchhcccceeeeecccccccccccceeeeccccc
Q 001946 71 IEFNESFRLRVTLLRDMNVKNKDADTFLKNCLEFNLYEPRRDKTQLLATATIDLADY 127 (992)
Q Consensus 71 iEFnEsFrL~vtl~~e~s~kg~~~~~F~KN~LEfnlye~RrdK~QlLGtA~inLAd~ 127 (992)
=+|||.|.+.|. + + ...|.|.+|+-.-.+-.+||++.|+|.++
T Consensus 55 P~WnE~f~f~v~---~----------~-~~~L~~~V~D~d~~~dd~iG~~~i~L~~l 97 (167)
T 2cjs_A 55 PSWEQDFMFEIN---R----------L-DLGLTVEVWNKGLIWDTMVGTVWIPLRTI 97 (167)
T ss_dssp CEEEEEEEEECC---C----------T-TSEEEEEEEECCSSCCEEEEEEEEEGGGS
T ss_pred CCCCCEEEEEee---C----------C-CCEEEEEEEECCCCCCceEEEEEEEHHHh
Confidence 589999998875 1 1 12499999986422238999999999984
No 44
>1dip_A Delta-sleep-inducing peptide immunoreactive peptide; structure, leucine zipper, PIG, acetylation; NMR {Sus scrofa} SCOP: h.1.12.1
Probab=25.54 E-value=60 Score=29.19 Aligned_cols=37 Identities=27% Similarity=0.364 Sum_probs=28.8
Q ss_pred ccCccccchhHHHhhHHHHHHHHHHHHHH---HHHHHHHH
Q 001946 553 KVYPRDTRSAVAESKIQQLEHKINMLETE---LREAAAIE 589 (992)
Q Consensus 553 ~~~~~~~~~~~~~~ki~ele~rie~LE~E---LREaAAlE 589 (992)
.-|...+.-.+|..+|.||+.|+..||.| ||..|.-|
T Consensus 9 Lm~AVREEVevLKe~I~EL~e~~~qLE~EN~~Lk~~aspE 48 (78)
T 1dip_A 9 LMYAVREEVEILKEQIRELVEKNSQLERENTLLKTLASPE 48 (78)
T ss_dssp GGGTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH
Confidence 34555566678999999999999999998 66666544
No 45
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=24.26 E-value=2.5e+02 Score=32.08 Aligned_cols=120 Identities=18% Similarity=0.232 Sum_probs=70.3
Q ss_pred eEEEEEEEeeeecCCCCccc--ccccce-eEEEeecC---CCCCCCcccccCCCcccccCceEEeecceeeeEEEEeecc
Q 001946 15 IHVDYQIHIQDIKPWPPSQS--LRSLRS-VMIQWQNG---DRNSGSTKTVGPSLGSVIGEGKIEFNESFRLRVTLLRDMN 88 (992)
Q Consensus 15 v~vdy~IhiqeIkPWPpSqS--lrSlrS-VllqWENG---d~~SGsT~~V~PSlgs~vG~GkiEFnEsFrL~vtl~~e~s 88 (992)
....+.|+|.+-+-||+... -...-- |.++- .| +.....|+++-=+-- .=.|||.|.++|..
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l-~g~~~d~~~~kTkvi~~ng~------NP~WnE~f~F~v~~----- 562 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEI-HGVGRDTGSRQTAVITNNGF------NPRWDMEFEFEVTV----- 562 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEE-ESSGGGCEEEECCCCTTCSS------SCEEEEEEEEEESC-----
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEE-ecCCCCcceeecccccCCCC------CCccCceEEEEEec-----
Confidence 45567888888888887652 111111 22222 23 444556665543201 24689999887641
Q ss_pred cCCCCcchhcccceeeeeccccc-ccccccceeeeccccccccccceeeeeccccccccccCCCceEEEEee
Q 001946 89 VKNKDADTFLKNCLEFNLYEPRR-DKTQLLATATIDLADYGIVKETLSVNAPMNSKRSFRNTAQPVLFIKIQ 159 (992)
Q Consensus 89 ~kg~~~~~F~KN~LEfnlye~Rr-dK~QlLGtA~inLAd~gii~e~~si~~p~n~krS~Rn~~qp~lyv~Iq 159 (992)
.+ -..|.|.||+-.+ .+-.+||.++|.|.+. ..+. -.+||.-++.-. ...+.|||+|+
T Consensus 563 -----~e---l~~L~~~V~D~D~~~~dd~iG~~~ipl~~L--~~G~--r~v~L~d~~g~~-~~~~~L~v~i~ 621 (624)
T 1djx_A 563 -----PD---LALVRFMVEDYDSSSKNDFIGQSTIPWNSL--KQGY--RHVHLLSKNGDQ-HPSATLFVKIS 621 (624)
T ss_dssp -----GG---GCEEEEEEEECCSSSCCEEEEEEEEEGGGB--CCEE--EEEEEECTTSCE-EEEEEEEEEEE
T ss_pred -----CC---CCEEEEEEEEcCCCCCCceeEEEEEEHHHc--CCCc--EEEeCCCCCcCC-CCceEEEEEEE
Confidence 11 1479999998743 2338999999999874 2221 246774443322 23577888886
No 46
>3ra3_B P2F; coiled coil domain, fiber, KIH interactions, synthetic biolo helical reconstruction, de novo protein; HET: PHI; 2.31A {Synthetic}
Probab=22.71 E-value=75 Score=23.66 Aligned_cols=23 Identities=39% Similarity=0.468 Sum_probs=14.7
Q ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHH
Q 001946 564 AESKIQQLEHKINMLETELREAAAIE 589 (992)
Q Consensus 564 ~~~ki~ele~rie~LE~ELREaAAlE 589 (992)
+.+|+..|+++|..||-| .||||
T Consensus 5 lkqknarlkqeiaaleye---iaale 27 (28)
T 3ra3_B 5 LKQKNARLKQEIAALEYE---IAALE 27 (28)
T ss_dssp HHHHHHHHHHHHHHHHHH---HHHHC
T ss_pred HHHhhhHHHHHHHHHHHH---HHHhc
Confidence 556777777777777654 35554
No 47
>2er8_A Regulatory protein Leu3; Zn(2)Cys(6) binuclear cluster motif, transcription activator/DNA complex; 2.85A {Saccharomyces cerevisiae} PDB: 2ere_A 2erg_A
Probab=21.35 E-value=43 Score=27.27 Aligned_cols=22 Identities=14% Similarity=0.291 Sum_probs=17.7
Q ss_pred HHhhHHHHHHHHHHHHHHHHHH
Q 001946 564 AESKIQQLEHKINMLETELREA 585 (992)
Q Consensus 564 ~~~ki~ele~rie~LE~ELREa 585 (992)
....+++||.+|+.||..|...
T Consensus 47 ~~~~~~~Le~ri~~Le~~l~~l 68 (72)
T 2er8_A 47 KRARNEAIEKRFKELTRTLTNL 68 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCC
T ss_pred cHHHHHHHHHHHHHHHHHHHHH
Confidence 3478889999999999888754
Done!