Query 001947
Match_columns 992
No_of_seqs 417 out of 3294
Neff 7.8
Searched_HMMs 46136
Date Thu Mar 28 13:01:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001947.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001947hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0153 GalK Galactokinase [Ca 100.0 4.1E-76 8.9E-81 638.8 31.6 382 478-976 5-389 (390)
2 PTZ00290 galactokinase; Provis 100.0 1.3E-67 2.7E-72 604.7 36.4 389 480-977 16-457 (468)
3 PLN02865 galactokinase 100.0 1.2E-67 2.6E-72 599.9 34.7 391 480-975 13-422 (423)
4 PLN02521 galactokinase 100.0 8.5E-64 1.8E-68 581.0 37.1 421 481-978 34-496 (497)
5 PRK05322 galactokinase; Provis 100.0 7.1E-63 1.5E-67 563.8 36.4 378 482-975 6-386 (387)
6 PRK05101 galactokinase; Provis 100.0 1.6E-61 3.4E-66 552.5 34.5 373 481-975 6-381 (382)
7 TIGR00131 gal_kin galactokinas 100.0 2.8E-60 6.1E-65 545.4 34.6 376 483-975 5-385 (386)
8 PRK00555 galactokinase; Provis 100.0 3.8E-60 8.2E-65 537.0 33.7 355 497-976 3-362 (363)
9 PRK03817 galactokinase; Provis 100.0 2E-51 4.3E-56 466.9 32.4 347 498-976 2-350 (351)
10 KOG0631 Galactokinase [Carbohy 100.0 1.3E-46 2.8E-51 414.1 22.4 408 482-959 26-462 (489)
11 PLN02677 mevalonate kinase 100.0 6.3E-41 1.4E-45 378.4 31.9 340 497-975 3-381 (387)
12 TIGR00549 mevalon_kin mevalona 100.0 2.9E-41 6.3E-46 371.6 23.8 273 501-937 1-273 (273)
13 TIGR01220 Pmev_kin_Gr_pos phos 100.0 8E-39 1.7E-43 362.6 32.2 314 498-966 2-352 (358)
14 COG1577 ERG12 Mevalonate kinas 100.0 2.5E-39 5.3E-44 351.3 25.7 292 498-956 2-293 (307)
15 KOG1511 Mevalonate kinase MVK/ 100.0 1.9E-38 4.1E-43 334.4 25.0 340 497-976 5-380 (397)
16 PRK13412 fkp bifunctional fuco 100.0 4.8E-38 1E-42 381.6 26.9 306 495-951 608-948 (974)
17 PTZ00298 mevalonate kinase; Pr 100.0 3.2E-36 6.9E-41 338.6 25.3 303 498-963 12-317 (328)
18 PRK03926 mevalonate kinase; Pr 100.0 6.1E-35 1.3E-39 325.8 29.9 295 497-975 2-298 (302)
19 PF13528 Glyco_trans_1_3: Glyc 100.0 4E-32 8.6E-37 305.7 27.9 311 16-346 1-317 (318)
20 COG2605 Predicted kinase relat 100.0 1.6E-30 3.5E-35 269.0 23.3 313 497-977 2-331 (333)
21 PRK12446 undecaprenyldiphospho 100.0 1.7E-26 3.7E-31 262.5 31.3 326 13-369 1-351 (352)
22 TIGR00661 MJ1255 conserved hyp 99.9 2.9E-25 6.3E-30 250.3 28.2 307 17-350 1-315 (321)
23 cd03784 GT1_Gtf_like This fami 99.9 7.5E-26 1.6E-30 263.2 23.7 345 16-369 1-400 (401)
24 COG0707 MurG UDP-N-acetylgluco 99.9 1.1E-24 2.5E-29 244.9 29.9 318 22-371 6-355 (357)
25 PRK00128 ipk 4-diphosphocytidy 99.9 3.2E-24 7E-29 237.5 21.8 262 497-952 3-270 (286)
26 COG1819 Glycosyl transferases, 99.9 3.1E-24 6.7E-29 247.4 20.9 341 15-373 1-401 (406)
27 TIGR01426 MGT glycosyltransfer 99.9 3E-23 6.6E-28 240.6 27.7 336 23-371 2-390 (392)
28 PRK02534 4-diphosphocytidyl-2- 99.9 3.6E-23 7.9E-28 231.5 24.9 296 497-974 4-309 (312)
29 PHA03392 egt ecdysteroid UDP-g 99.9 8.7E-22 1.9E-26 233.1 34.1 360 16-390 21-477 (507)
30 COG0083 ThrB Homoserine kinase 99.9 1.2E-21 2.5E-26 210.9 24.5 237 609-977 58-298 (299)
31 PLN02451 homoserine kinase 99.9 7.3E-22 1.6E-26 223.8 23.2 243 609-975 114-364 (370)
32 TIGR00154 ispE 4-diphosphocyti 99.9 4.4E-22 9.6E-27 220.1 20.6 172 497-738 2-180 (293)
33 PLN02208 glycosyltransferase f 99.9 1.8E-20 3.9E-25 217.8 32.5 321 22-350 10-402 (442)
34 TIGR01219 Pmev_kin_ERG8 phosph 99.9 3.2E-20 7E-25 212.5 29.4 358 499-974 2-447 (454)
35 COG4671 Predicted glycosyl tra 99.9 6.9E-20 1.5E-24 195.7 29.1 335 15-373 9-391 (400)
36 PLN00414 glycosyltransferase f 99.9 1.1E-19 2.3E-24 211.6 30.2 323 22-349 10-402 (446)
37 PLN02210 UDP-glucosyl transfer 99.9 2.2E-19 4.7E-24 210.1 32.3 312 22-349 14-415 (456)
38 PLN03007 UDP-glucosyltransfera 99.9 1.5E-19 3.3E-24 213.7 28.9 328 16-350 6-441 (482)
39 PLN02448 UDP-glycosyltransfera 99.8 5.9E-19 1.3E-23 207.6 29.9 353 15-387 10-448 (459)
40 PRK01123 shikimate kinase; Pro 99.8 5.7E-19 1.2E-23 194.7 26.4 122 609-737 56-178 (282)
41 TIGR01920 Shik_kin_archae shik 99.8 4.5E-19 9.8E-24 192.7 24.4 118 610-733 46-164 (261)
42 TIGR00191 thrB homoserine kina 99.8 1.7E-19 3.6E-24 201.1 21.5 234 609-974 60-300 (302)
43 PF00201 UDPGT: UDP-glucoronos 99.8 4.7E-22 1E-26 238.1 1.0 185 194-391 246-454 (500)
44 PTZ00299 homoserine kinase; Pr 99.8 3.6E-19 7.8E-24 198.4 23.8 249 609-982 61-328 (336)
45 PLN02670 transferase, transfer 99.8 2.5E-18 5.3E-23 200.7 30.9 344 22-373 12-465 (472)
46 PLN02764 glycosyltransferase f 99.8 2.9E-18 6.2E-23 198.6 31.1 327 16-350 6-408 (453)
47 PLN02173 UDP-glucosyl transfer 99.8 3.5E-18 7.6E-23 198.5 31.4 345 22-387 11-439 (449)
48 PRK01212 homoserine kinase; Pr 99.8 3E-19 6.6E-24 199.4 21.6 233 609-974 62-299 (301)
49 PRK00726 murG undecaprenyldiph 99.8 2.5E-18 5.4E-23 196.9 28.9 324 16-371 2-355 (357)
50 PLN02410 UDP-glucoronosyl/UDP- 99.8 7.1E-18 1.5E-22 196.7 32.9 346 22-387 13-441 (451)
51 cd03785 GT1_MurG MurG is an N- 99.8 7.1E-18 1.5E-22 192.3 28.5 298 22-350 5-325 (350)
52 PLN02992 coniferyl-alcohol glu 99.8 1.2E-17 2.7E-22 195.0 30.4 329 22-371 11-444 (481)
53 PLN02605 monogalactosyldiacylg 99.8 1.6E-18 3.6E-23 200.2 22.8 242 108-371 90-379 (382)
54 PLN02562 UDP-glycosyltransfera 99.8 9.2E-18 2E-22 196.2 28.6 315 14-349 7-413 (448)
55 PLN02863 UDP-glucoronosyl/UDP- 99.8 2.3E-17 5E-22 193.8 31.5 349 22-390 15-465 (477)
56 PRK03188 4-diphosphocytidyl-2- 99.8 8.9E-18 1.9E-22 187.3 25.4 285 499-975 3-294 (300)
57 PLN03004 UDP-glycosyltransfera 99.8 5.8E-17 1.3E-21 188.4 31.2 151 194-349 235-424 (451)
58 PRK13608 diacylglycerol glucos 99.8 1.1E-17 2.3E-22 194.0 24.5 243 108-372 94-370 (391)
59 PRK13609 diacylglycerol glucos 99.8 8.2E-18 1.8E-22 194.3 23.1 325 16-371 5-369 (380)
60 PLN02555 limonoid glucosyltran 99.8 9.2E-17 2E-21 188.2 31.7 318 22-350 13-430 (480)
61 PLN02554 UDP-glycosyltransfera 99.8 5.1E-17 1.1E-21 192.0 29.8 150 194-348 238-439 (481)
62 PLN02207 UDP-glycosyltransfera 99.8 9.3E-17 2E-21 187.3 31.4 324 13-348 1-425 (468)
63 PLN00164 glucosyltransferase; 99.8 9.4E-17 2E-21 189.2 31.7 354 13-389 1-466 (480)
64 PLN02167 UDP-glycosyltransfera 99.8 8.1E-17 1.8E-21 190.0 29.1 151 194-349 243-434 (475)
65 TIGR01133 murG undecaprenyldip 99.8 2.6E-16 5.6E-21 179.3 30.0 303 17-351 2-323 (348)
66 TIGR03590 PseG pseudaminic aci 99.8 4.2E-17 9.1E-22 179.8 21.8 249 23-320 10-279 (279)
67 PLN02152 indole-3-acetate beta 99.8 2.3E-16 5.1E-21 183.6 28.7 315 22-349 9-417 (455)
68 PLN02534 UDP-glycosyltransfera 99.8 6.2E-16 1.4E-20 181.5 32.1 318 22-348 14-443 (491)
69 PRK14616 4-diphosphocytidyl-2- 99.7 1.1E-16 2.4E-21 177.1 22.5 266 497-956 4-275 (287)
70 PRK14611 4-diphosphocytidyl-2- 99.7 1.4E-16 3.1E-21 175.0 21.8 167 498-738 3-174 (275)
71 PLN03015 UDP-glucosyl transfer 99.7 1.2E-15 2.7E-20 177.3 30.1 358 14-391 2-463 (470)
72 PRK14614 4-diphosphocytidyl-2- 99.7 1.1E-16 2.4E-21 176.2 19.0 171 497-738 4-179 (280)
73 TIGR00215 lpxB lipid-A-disacch 99.7 4E-16 8.7E-21 180.0 20.9 300 22-350 11-348 (385)
74 TIGR00144 beta_RFAP_syn beta-R 99.7 3E-15 6.5E-20 167.6 26.5 230 609-975 64-323 (324)
75 PRK14608 4-diphosphocytidyl-2- 99.7 1.1E-15 2.4E-20 168.9 22.4 174 496-738 6-184 (290)
76 PRK14612 4-diphosphocytidyl-2- 99.7 6.5E-16 1.4E-20 170.0 19.0 164 498-737 4-172 (276)
77 PRK14609 4-diphosphocytidyl-2- 99.7 1.4E-15 3.1E-20 166.0 18.5 116 606-738 61-177 (269)
78 PRK14615 4-diphosphocytidyl-2- 99.7 6.7E-15 1.5E-19 163.1 21.2 171 496-738 6-183 (296)
79 PRK00343 ipk 4-diphosphocytidy 99.6 1.6E-14 3.5E-19 157.9 20.9 168 497-738 7-180 (271)
80 PRK14613 4-diphosphocytidyl-2- 99.6 6.1E-14 1.3E-18 155.4 22.0 213 609-956 74-288 (297)
81 PF10509 GalKase_gal_bdg: Gala 99.6 3.2E-16 7E-21 124.7 2.7 51 484-535 2-52 (52)
82 COG3980 spsG Spore coat polysa 99.6 3.1E-14 6.8E-19 148.6 16.5 259 24-350 12-294 (318)
83 PRK00025 lpxB lipid-A-disaccha 99.5 3.7E-13 7.9E-18 155.5 21.7 319 16-372 2-376 (380)
84 PF04101 Glyco_tran_28_C: Glyc 99.5 3.9E-15 8.4E-20 151.6 4.0 128 225-352 1-147 (167)
85 KOG1192 UDP-glucuronosyl and U 99.5 3.6E-12 7.8E-17 152.7 29.8 154 192-351 243-424 (496)
86 PF00288 GHMP_kinases_N: GHMP 99.4 2.4E-13 5.2E-18 116.1 7.4 67 632-700 1-67 (67)
87 TIGR03492 conserved hypothetic 99.4 2.5E-11 5.4E-16 140.5 23.1 317 26-370 6-395 (396)
88 PRK14610 4-diphosphocytidyl-2- 99.4 3.5E-11 7.5E-16 132.7 20.3 167 497-737 4-177 (283)
89 PRK00650 4-diphosphocytidyl-2- 99.3 5.3E-11 1.1E-15 129.8 19.4 110 609-734 61-170 (288)
90 PLN02871 UDP-sulfoquinovose:DA 99.3 6.6E-10 1.4E-14 132.1 27.2 307 13-351 56-402 (465)
91 KOG0631 Galactokinase [Carbohy 99.3 5.4E-15 1.2E-19 164.7 -16.3 421 121-620 64-486 (489)
92 cd03814 GT1_like_2 This family 99.2 3E-09 6.4E-14 120.6 25.9 290 27-351 14-334 (364)
93 COG1685 Archaeal shikimate kin 99.2 2.4E-09 5.3E-14 111.8 22.1 164 498-732 4-169 (278)
94 cd04962 GT1_like_5 This family 99.2 2.7E-09 5.9E-14 122.3 25.2 131 211-350 185-337 (371)
95 TIGR01240 mevDPdecarb diphosph 99.2 3.5E-09 7.6E-14 117.3 22.9 81 609-701 66-146 (305)
96 COG1947 IspE 4-diphosphocytidy 99.1 2.8E-09 6E-14 115.0 19.9 170 497-737 4-178 (289)
97 cd03816 GT1_ALG1_like This fam 99.1 1.1E-08 2.4E-13 119.7 26.9 120 220-349 228-381 (415)
98 cd03825 GT1_wcfI_like This fam 99.1 1E-08 2.3E-13 116.8 23.8 134 209-350 177-331 (365)
99 cd03823 GT1_ExpE7_like This fa 99.1 8.4E-09 1.8E-13 116.5 22.6 122 222-351 189-331 (359)
100 cd03817 GT1_UGDG_like This fam 99.1 3.2E-08 7E-13 112.1 26.3 296 24-351 11-345 (374)
101 PF08544 GHMP_kinases_C: GHMP 99.1 1.9E-10 4.1E-15 103.1 6.3 82 860-956 1-84 (85)
102 cd04951 GT1_WbdM_like This fam 99.1 2.9E-08 6.2E-13 112.9 25.8 129 211-350 176-327 (360)
103 cd03820 GT1_amsD_like This fam 99.1 3.9E-08 8.4E-13 109.9 26.0 120 223-350 177-320 (348)
104 cd03794 GT1_wbuB_like This fam 99.1 4.9E-08 1.1E-12 111.0 26.8 122 222-351 218-367 (394)
105 TIGR03088 stp2 sugar transfera 99.0 2.5E-08 5.4E-13 114.9 24.3 294 16-350 2-339 (374)
106 KOG1537 Homoserine kinase [Ami 99.0 2.5E-09 5.4E-14 109.8 13.9 242 629-968 93-343 (355)
107 cd03808 GT1_cap1E_like This fa 99.0 7.9E-08 1.7E-12 107.9 27.6 121 222-350 186-330 (359)
108 PF04007 DUF354: Protein of un 99.0 8.1E-08 1.8E-12 107.6 26.3 309 16-371 1-334 (335)
109 cd03819 GT1_WavL_like This fam 99.0 8.5E-08 1.8E-12 109.0 25.6 278 27-348 10-329 (355)
110 PRK10307 putative glycosyl tra 99.0 2.9E-07 6.2E-12 107.7 30.0 131 211-350 217-374 (412)
111 cd03812 GT1_CapH_like This fam 99.0 9.6E-08 2.1E-12 108.7 25.2 129 214-352 183-334 (358)
112 cd03807 GT1_WbnK_like This fam 99.0 1E-07 2.2E-12 107.4 25.1 129 211-350 181-333 (365)
113 PRK15179 Vi polysaccharide bio 99.0 1.8E-07 3.8E-12 114.6 27.8 121 223-349 516-659 (694)
114 cd03811 GT1_WabH_like This fam 99.0 1.4E-07 3E-12 105.6 25.1 116 222-345 187-325 (353)
115 cd03786 GT1_UDP-GlcNAc_2-Epime 98.9 1.6E-07 3.4E-12 107.8 25.0 143 214-367 190-362 (363)
116 TIGR00236 wecB UDP-N-acetylglu 98.9 2.9E-07 6.3E-12 105.9 27.0 237 107-369 75-363 (365)
117 cd03801 GT1_YqgM_like This fam 98.9 2.8E-07 6.1E-12 103.5 26.0 293 26-350 13-342 (374)
118 TIGR03449 mycothiol_MshA UDP-N 98.9 2.9E-07 6.4E-12 107.3 26.2 133 209-350 205-369 (405)
119 COG1907 Predicted archaeal sug 98.9 3.2E-07 7E-12 97.0 22.4 225 629-976 70-311 (312)
120 cd03800 GT1_Sucrose_synthase T 98.9 1.4E-07 3.1E-12 109.0 21.9 128 214-350 211-369 (398)
121 PRK05749 3-deoxy-D-manno-octul 98.9 2.9E-07 6.2E-12 108.3 24.6 82 264-351 304-390 (425)
122 cd03821 GT1_Bme6_like This fam 98.9 7E-07 1.5E-11 101.0 26.6 126 214-350 194-346 (375)
123 KOG4644 L-fucose kinase [Carbo 98.8 7.2E-08 1.6E-12 106.9 16.7 102 629-734 690-805 (948)
124 cd03805 GT1_ALG2_like This fam 98.8 1.1E-06 2.3E-11 101.9 27.8 120 222-350 209-365 (392)
125 cd03799 GT1_amsK_like This is 98.8 8.7E-07 1.9E-11 100.5 25.2 121 222-350 177-328 (355)
126 cd03796 GT1_PIG-A_like This fa 98.8 8.4E-07 1.8E-11 103.4 25.6 118 223-350 192-334 (398)
127 PRK14089 ipid-A-disaccharide s 98.8 2.2E-08 4.7E-13 113.0 11.7 119 222-345 166-315 (347)
128 cd03792 GT1_Trehalose_phosphor 98.8 6E-07 1.3E-11 103.5 23.7 128 212-350 179-338 (372)
129 PLN02275 transferase, transfer 98.8 1.2E-06 2.7E-11 101.0 25.7 92 246-347 260-371 (371)
130 cd03802 GT1_AviGT4_like This f 98.8 6.5E-07 1.4E-11 100.9 22.4 113 226-348 173-307 (335)
131 PRK09922 UDP-D-galactose:(gluc 98.8 4.3E-07 9.3E-12 104.3 21.2 121 224-352 180-327 (359)
132 PF02684 LpxB: Lipid-A-disacch 98.8 2.4E-07 5.2E-12 105.2 18.6 295 20-350 2-341 (373)
133 cd03798 GT1_wlbH_like This fam 98.8 2E-06 4.4E-11 96.9 26.1 121 223-351 201-346 (377)
134 COG4542 PduX Protein involved 98.7 1E-06 2.2E-11 91.1 20.2 109 620-744 71-181 (293)
135 cd03818 GT1_ExpC_like This fam 98.7 2E-06 4.4E-11 100.1 25.3 81 262-350 281-367 (396)
136 PRK04181 4-diphosphocytidyl-2- 98.7 1.9E-07 4.2E-12 101.1 15.5 115 609-738 61-180 (257)
137 cd05844 GT1_like_7 Glycosyltra 98.7 1.4E-06 3.1E-11 99.6 23.0 119 224-350 188-337 (367)
138 COG0763 LpxB Lipid A disacchar 98.7 9.4E-07 2E-11 98.2 19.6 317 17-371 3-379 (381)
139 cd03795 GT1_like_4 This family 98.7 4.1E-06 8.9E-11 95.1 25.5 120 223-350 190-333 (357)
140 PRK00654 glgA glycogen synthas 98.6 3.1E-06 6.8E-11 100.7 24.1 137 210-348 268-427 (466)
141 TIGR02472 sucr_P_syn_N sucrose 98.6 7.8E-06 1.7E-10 96.6 26.9 82 261-350 316-407 (439)
142 cd03822 GT1_ecORF704_like This 98.6 6.4E-06 1.4E-10 93.5 25.3 118 224-350 185-335 (366)
143 PRK01021 lpxB lipid-A-disaccha 98.6 2E-06 4.4E-11 101.7 21.0 293 21-350 231-572 (608)
144 COG3890 ERG8 Phosphomevalonate 98.6 3.7E-06 7.9E-11 87.9 19.5 92 642-738 107-207 (337)
145 PRK15427 colanic acid biosynth 98.6 5.1E-06 1.1E-10 97.1 23.1 120 223-350 221-372 (406)
146 PRK15490 Vi polysaccharide bio 98.6 1.2E-05 2.6E-10 94.8 25.5 210 105-333 267-524 (578)
147 PLN02407 diphosphomevalonate d 98.5 1.2E-05 2.6E-10 89.1 21.2 60 632-701 105-167 (343)
148 PLN02846 digalactosyldiacylgly 98.5 1.8E-05 3.8E-10 92.7 23.5 113 226-350 230-364 (462)
149 PRK10125 putative glycosyl tra 98.5 1.4E-05 3E-10 93.3 22.5 96 238-342 260-364 (405)
150 KOG3349 Predicted glycosyltran 98.5 1.3E-06 2.8E-11 83.6 11.1 111 224-334 4-137 (170)
151 PRK15484 lipopolysaccharide 1, 98.5 2.4E-05 5.3E-10 90.6 24.3 132 210-350 180-345 (380)
152 PRK05905 hypothetical protein; 98.5 2.5E-06 5.5E-11 92.1 14.9 112 609-738 66-179 (258)
153 TIGR02149 glgA_Coryne glycogen 98.5 2.1E-05 4.5E-10 91.0 23.4 135 209-350 187-353 (388)
154 TIGR02095 glgA glycogen/starch 98.5 2.5E-05 5.5E-10 93.2 24.6 131 210-348 276-436 (473)
155 cd01635 Glycosyltransferase_GT 98.4 6.3E-06 1.4E-10 86.6 16.1 53 261-313 160-219 (229)
156 PRK14099 glycogen synthase; Pr 98.4 5.3E-05 1.1E-09 90.5 25.3 133 211-345 281-440 (485)
157 cd04955 GT1_like_6 This family 98.3 0.00014 3E-09 82.8 25.8 125 212-350 183-331 (363)
158 cd03809 GT1_mtfB_like This fam 98.3 1.9E-05 4.2E-10 89.4 18.7 122 218-350 190-337 (365)
159 cd03804 GT1_wbaZ_like This fam 98.3 5.1E-05 1.1E-09 86.6 21.2 117 226-350 197-327 (351)
160 TIGR02470 sucr_synth sucrose s 98.3 0.00045 9.7E-09 85.3 30.2 125 214-347 539-707 (784)
161 PLN02501 digalactosyldiacylgly 98.3 3.2E-05 6.9E-10 92.3 18.8 222 107-351 423-683 (794)
162 TIGR02468 sucrsPsyn_pln sucros 98.3 0.00013 2.8E-09 91.9 24.8 83 261-351 547-639 (1050)
163 cd03806 GT1_ALG11_like This fa 98.2 0.00033 7.2E-09 82.2 27.0 118 224-350 237-393 (419)
164 TIGR03087 stp1 sugar transfera 98.2 5.5E-05 1.2E-09 88.1 20.0 95 246-350 258-363 (397)
165 PLN02939 transferase, transfer 98.2 0.00067 1.4E-08 84.4 29.8 137 210-348 763-930 (977)
166 PLN02316 synthase/transferase 98.2 0.00072 1.6E-08 85.5 30.5 138 210-349 826-998 (1036)
167 COG3407 MVD1 Mevalonate pyroph 98.2 0.00021 4.5E-09 78.8 22.6 81 609-701 71-151 (329)
168 TIGR03568 NeuC_NnaA UDP-N-acet 98.2 0.00012 2.6E-09 84.2 22.0 216 106-348 81-338 (365)
169 cd03791 GT1_Glycogen_synthase_ 98.2 6.2E-05 1.3E-09 89.9 20.2 136 210-348 281-441 (476)
170 COG1817 Uncharacterized protei 98.2 0.00036 7.7E-09 75.2 22.2 309 17-373 2-342 (346)
171 PF02350 Epimerase_2: UDP-N-ac 98.1 1.4E-05 2.9E-10 91.2 12.0 135 221-367 178-345 (346)
172 PLN00142 sucrose synthase 98.1 0.00063 1.4E-08 84.1 25.9 125 214-347 562-730 (815)
173 cd04950 GT1_like_1 Glycosyltra 98.0 0.00057 1.2E-08 79.0 20.9 114 225-350 206-341 (373)
174 KOG2833 Mevalonate pyrophospha 97.9 0.00034 7.3E-09 74.8 16.2 62 630-701 105-166 (395)
175 cd03813 GT1_like_3 This family 97.9 0.00036 7.7E-09 83.4 18.1 120 223-351 292-444 (475)
176 PF00534 Glycos_transf_1: Glyc 97.8 3.8E-05 8.3E-10 78.0 6.6 132 210-350 2-159 (172)
177 COG1829 Predicted archaeal kin 97.7 0.0021 4.5E-08 68.4 18.7 92 629-730 73-168 (283)
178 PF03033 Glyco_transf_28: Glyc 97.7 1.3E-05 2.8E-10 78.6 1.8 33 22-54 4-36 (139)
179 PLN02949 transferase, transfer 97.7 0.0057 1.2E-07 72.6 23.4 96 246-350 302-423 (463)
180 KOG4519 Phosphomevalonate kina 97.6 0.013 2.8E-07 63.3 21.9 60 642-701 152-224 (459)
181 COG0381 WecB UDP-N-acetylgluco 97.6 0.03 6.4E-07 63.2 25.4 243 106-372 80-373 (383)
182 cd04949 GT1_gtfA_like This fam 97.4 0.00082 1.8E-08 77.3 10.5 120 224-350 204-346 (372)
183 COG5017 Uncharacterized conser 97.3 0.002 4.3E-08 61.1 9.8 107 226-333 2-125 (161)
184 PF13692 Glyco_trans_1_4: Glyc 97.0 0.0011 2.3E-08 64.4 5.9 115 225-349 3-135 (135)
185 PHA01633 putative glycosyl tra 97.0 0.0028 6.1E-08 71.6 9.6 137 211-349 135-307 (335)
186 TIGR02918 accessory Sec system 96.9 0.005 1.1E-07 73.8 11.7 120 223-348 318-466 (500)
187 PRK14098 glycogen synthase; Pr 96.8 0.0082 1.8E-07 71.9 12.2 135 210-348 292-450 (489)
188 COG1519 KdtA 3-deoxy-D-manno-o 96.7 0.17 3.7E-06 57.7 20.3 82 263-350 301-387 (419)
189 cd04946 GT1_AmsK_like This fam 96.6 0.011 2.3E-07 69.4 10.7 122 222-350 228-378 (407)
190 PRK09814 beta-1,6-galactofuran 96.4 0.13 2.9E-06 58.4 18.2 109 226-346 171-297 (333)
191 PF06258 Mito_fiss_Elm1: Mitoc 96.4 1.2 2.7E-05 49.9 25.2 97 262-371 209-309 (311)
192 COG3660 Predicted nucleoside-d 95.7 1.3 2.7E-05 47.4 19.1 85 274-371 239-326 (329)
193 PHA01630 putative group 1 glyc 95.6 0.073 1.6E-06 60.5 10.8 91 223-313 141-247 (331)
194 COG2099 CobK Precorrin-6x redu 94.5 0.69 1.5E-05 49.4 13.4 149 109-308 57-231 (257)
195 TIGR02195 heptsyl_trn_II lipop 94.3 2.9 6.4E-05 47.3 19.5 95 213-308 164-279 (334)
196 TIGR02193 heptsyl_trn_I lipopo 93.5 4.6 9.9E-05 45.4 19.1 125 217-347 173-319 (319)
197 PRK10916 ADP-heptose:LPS hepto 93.3 5.4 0.00012 45.6 19.4 93 214-307 171-288 (348)
198 PF08660 Alg14: Oligosaccharid 92.7 0.79 1.7E-05 46.7 10.0 40 109-148 83-131 (170)
199 PRK10422 lipopolysaccharide co 92.6 16 0.00034 41.9 21.9 85 222-307 182-289 (352)
200 PF13477 Glyco_trans_4_2: Glyc 92.4 1.4 3E-05 42.7 11.2 100 17-144 1-105 (139)
201 TIGR00715 precor6x_red precorr 92.2 20 0.00044 39.1 21.5 49 261-309 174-233 (256)
202 PF06925 MGDG_synth: Monogalac 91.8 0.16 3.5E-06 51.7 3.8 40 108-147 79-126 (169)
203 COG0859 RfaF ADP-heptose:LPS h 91.6 17 0.00036 41.4 20.3 85 223-308 175-279 (334)
204 PF13844 Glyco_transf_41: Glyc 91.5 0.38 8.2E-06 56.5 6.8 114 213-329 275-413 (468)
205 TIGR02400 trehalose_OtsA alpha 91.5 0.37 8.1E-06 57.2 7.0 68 272-350 348-423 (456)
206 KOG1111 N-acetylglucosaminyltr 91.5 3.3 7.2E-05 46.3 13.5 68 246-313 225-309 (426)
207 PF02571 CbiJ: Precorrin-6x re 91.3 25 0.00054 38.2 20.9 153 110-311 58-231 (249)
208 PF13579 Glyco_trans_4_4: Glyc 90.9 0.69 1.5E-05 45.2 7.3 97 28-145 2-103 (160)
209 TIGR02201 heptsyl_trn_III lipo 90.5 16 0.00035 41.5 19.0 85 222-307 180-287 (344)
210 cd03789 GT1_LPS_heptosyltransf 89.5 20 0.00042 39.4 18.1 36 273-309 192-227 (279)
211 PF13439 Glyco_transf_4: Glyco 89.3 3.3 7.2E-05 41.1 10.9 27 27-53 12-38 (177)
212 PRK08248 O-acetylhomoserine am 88.8 0.17 3.6E-06 59.7 1.0 55 393-451 366-423 (431)
213 KOG0053 Cystathionine beta-lya 87.8 0.08 1.7E-06 60.3 -2.4 47 400-451 354-402 (409)
214 PF01975 SurE: Survival protei 87.7 2.5 5.5E-05 44.1 8.8 31 22-53 6-36 (196)
215 cd03788 GT1_TPS Trehalose-6-Ph 87.7 0.51 1.1E-05 56.2 4.2 68 272-350 353-428 (460)
216 PLN02509 cystathionine beta-ly 87.4 0.089 1.9E-06 62.4 -2.5 55 393-451 400-457 (464)
217 PRK07049 methionine gamma-lyas 85.9 0.18 3.9E-06 59.4 -0.9 55 393-451 365-422 (427)
218 COG3914 Spy Predicted O-linked 85.5 4.6 0.0001 47.9 10.1 112 214-330 421-561 (620)
219 cd03793 GT1_Glycogen_synthase_ 85.0 2.1 4.5E-05 51.6 7.2 71 275-347 470-550 (590)
220 PRK06084 O-acetylhomoserine am 85.0 0.39 8.4E-06 56.5 1.2 48 400-451 369-418 (425)
221 PRK07812 O-acetylhomoserine am 84.9 0.38 8.3E-06 56.7 1.1 48 400-451 378-427 (436)
222 COG0297 GlgA Glycogen synthase 84.6 5.3 0.00011 47.6 10.3 136 210-348 279-441 (487)
223 COG4370 Uncharacterized protei 84.5 1.9 4.1E-05 47.0 5.9 92 273-369 305-409 (412)
224 TIGR01326 OAH_OAS_sulfhy OAH/O 84.1 0.17 3.7E-06 59.5 -2.2 48 400-451 366-415 (418)
225 PRK06234 methionine gamma-lyas 83.2 0.63 1.4E-05 54.3 2.0 55 393-451 336-393 (400)
226 PRK06702 O-acetylhomoserine am 83.2 0.57 1.2E-05 55.1 1.6 48 400-451 371-420 (432)
227 PRK07504 O-succinylhomoserine 82.9 0.19 4.2E-06 58.6 -2.5 48 400-451 342-391 (398)
228 PRK06434 cystathionine gamma-l 82.7 0.17 3.8E-06 58.5 -2.9 48 400-451 331-380 (384)
229 PRK08249 cystathionine gamma-s 81.9 0.23 4.9E-06 58.0 -2.4 48 400-451 340-389 (398)
230 PLN03063 alpha,alpha-trehalose 81.2 2.9 6.3E-05 53.2 6.9 68 273-350 369-444 (797)
231 PRK07671 cystathionine beta-ly 81.2 0.24 5.3E-06 57.3 -2.4 48 400-451 325-374 (377)
232 PRK06767 methionine gamma-lyas 81.1 0.28 6E-06 57.0 -2.0 55 393-451 324-381 (386)
233 PRK08045 cystathionine gamma-s 80.5 0.27 5.9E-06 57.1 -2.4 48 400-451 329-378 (386)
234 PF05159 Capsule_synth: Capsul 79.9 3.5 7.7E-05 45.2 6.3 47 262-309 182-228 (269)
235 COG0626 MetC Cystathionine bet 79.9 0.32 7E-06 56.0 -1.9 48 400-451 341-390 (396)
236 PRK05613 O-acetylhomoserine am 79.9 0.26 5.6E-06 58.1 -2.8 48 400-451 383-432 (437)
237 PF01053 Cys_Met_Meta_PP: Cys/ 79.6 0.54 1.2E-05 54.5 -0.3 53 395-451 328-383 (386)
238 PRK08133 O-succinylhomoserine 79.4 0.31 6.8E-06 56.7 -2.3 48 400-451 337-386 (390)
239 PRK05994 O-acetylhomoserine am 79.2 0.32 7E-06 57.3 -2.3 48 400-451 373-422 (427)
240 PF07429 Glyco_transf_56: 4-al 79.1 15 0.00033 41.3 10.7 82 262-350 245-334 (360)
241 PRK02797 4-alpha-L-fucosyltran 78.9 39 0.00084 37.7 13.6 79 262-347 206-292 (322)
242 TIGR01329 cysta_beta_ly_E cyst 78.7 0.33 7.2E-06 56.2 -2.4 48 400-451 322-371 (378)
243 KOG0853 Glycosyltransferase [C 78.7 1.3 2.9E-05 52.1 2.5 85 275-365 361-450 (495)
244 PRK08134 O-acetylhomoserine am 78.1 0.32 7E-06 57.3 -2.8 48 400-451 374-423 (433)
245 PRK05939 hypothetical protein; 77.9 0.35 7.6E-06 56.4 -2.5 48 400-451 343-392 (397)
246 COG0438 RfaG Glycosyltransfera 77.6 5.9 0.00013 43.3 7.3 118 225-350 200-343 (381)
247 PRK08057 cobalt-precorrin-6x r 77.5 1.1E+02 0.0024 33.2 20.8 35 111-145 58-99 (248)
248 TIGR01328 met_gam_lyase methio 77.4 0.45 9.8E-06 55.4 -1.8 48 400-451 337-386 (391)
249 PRK06176 cystathionine gamma-s 77.1 0.37 8.1E-06 55.8 -2.6 48 400-451 325-374 (380)
250 PRK06460 hypothetical protein; 75.8 0.41 8.8E-06 55.4 -2.7 48 400-451 321-370 (376)
251 TIGR02080 O_succ_thio_ly O-suc 75.5 0.45 9.8E-06 55.2 -2.4 48 400-451 328-377 (382)
252 PRK08861 cystathionine gamma-s 75.5 0.45 9.7E-06 55.3 -2.5 49 400-452 330-380 (388)
253 PRK08574 cystathionine gamma-s 74.9 0.47 1E-05 55.1 -2.5 48 400-451 331-380 (385)
254 PF04464 Glyphos_transf: CDP-G 74.6 2.7 5.9E-05 48.4 3.7 152 210-368 179-368 (369)
255 PF07355 GRDB: Glycine/sarcosi 74.4 20 0.00044 40.4 10.1 40 276-325 265-304 (349)
256 PRK08776 cystathionine gamma-s 74.2 0.45 9.7E-06 55.7 -2.9 49 400-452 337-387 (405)
257 PRK07503 methionine gamma-lyas 73.3 0.65 1.4E-05 54.3 -1.9 48 400-451 343-392 (403)
258 TIGR01325 O_suc_HS_sulf O-succ 72.2 0.59 1.3E-05 54.2 -2.6 48 400-451 329-378 (380)
259 TIGR03713 acc_sec_asp1 accesso 71.6 4 8.7E-05 49.3 4.2 76 262-350 409-489 (519)
260 cd00550 ArsA_ATPase Oxyanion-t 70.1 32 0.00069 37.4 10.5 37 18-54 2-38 (254)
261 COG0496 SurE Predicted acid ph 68.7 41 0.00089 36.4 10.5 24 29-53 12-35 (252)
262 PF01075 Glyco_transf_9: Glyco 68.4 16 0.00035 39.2 7.8 85 221-306 103-209 (247)
263 TIGR02919 accessory Sec system 66.8 13 0.00028 43.9 7.0 94 246-350 305-412 (438)
264 PRK07269 cystathionine gamma-s 65.6 0.9 1.9E-05 52.4 -2.9 48 400-451 311-360 (364)
265 PF02374 ArsA_ATPase: Anion-tr 65.0 33 0.00071 38.5 9.5 39 17-55 2-40 (305)
266 PRK10017 colanic acid biosynth 64.1 21 0.00045 42.1 8.0 71 275-351 323-394 (426)
267 PLN02242 methionine gamma-lyas 64.1 1 2.3E-05 52.8 -2.8 49 400-452 361-412 (418)
268 COG0003 ArsA Predicted ATPase 63.0 58 0.0013 36.8 10.9 40 16-55 2-41 (322)
269 PF04413 Glycos_transf_N: 3-De 62.5 13 0.00028 38.5 5.3 92 22-144 26-124 (186)
270 PRK07810 O-succinylhomoserine 61.5 1.3 2.9E-05 51.7 -2.5 48 400-451 351-400 (403)
271 cd00614 CGS_like CGS_like: Cys 59.8 1.3 2.9E-05 51.0 -2.9 48 400-451 317-366 (369)
272 PRK13932 stationary phase surv 58.5 99 0.0022 33.7 11.3 37 14-53 4-40 (257)
273 PRK08247 cystathionine gamma-s 57.7 1.6 3.6E-05 50.2 -2.6 47 401-451 312-360 (366)
274 PF13524 Glyco_trans_1_2: Glyc 57.5 19 0.00042 32.0 5.0 52 289-350 12-63 (92)
275 PRK10964 ADP-heptose:LPS hepto 56.4 35 0.00076 38.4 7.9 65 242-307 205-280 (322)
276 PRK14501 putative bifunctional 55.8 9.7 0.00021 48.2 3.6 68 272-350 354-429 (726)
277 PRK07811 cystathionine gamma-s 55.8 2.4 5.2E-05 49.3 -1.7 45 400-451 338-384 (388)
278 PRK09028 cystathionine beta-ly 52.7 3 6.4E-05 48.6 -1.6 45 400-452 338-384 (394)
279 PRK08064 cystathionine beta-ly 52.0 2.4 5.3E-05 49.3 -2.4 48 400-451 329-378 (390)
280 COG0052 RpsB Ribosomal protein 50.4 28 0.00061 37.3 5.3 38 109-146 142-187 (252)
281 PRK05968 hypothetical protein; 48.1 2.8 6.1E-05 48.7 -2.7 47 400-451 333-382 (389)
282 TIGR02398 gluc_glyc_Psyn gluco 44.9 45 0.00097 40.0 6.6 68 273-351 375-450 (487)
283 PRK00346 surE 5'(3')-nucleotid 44.6 2E+02 0.0044 31.3 11.0 30 22-53 6-35 (250)
284 PF12000 Glyco_trans_4_3: Gkyc 43.8 1.9E+02 0.0041 29.6 10.0 31 116-146 64-96 (171)
285 PRK12311 rpsB 30S ribosomal pr 42.2 97 0.0021 35.0 8.3 29 118-146 152-183 (326)
286 PF00551 Formyl_trans_N: Formy 41.2 81 0.0017 32.3 7.1 27 16-46 1-27 (181)
287 PRK05986 cob(I)alamin adenolsy 40.8 2.3E+02 0.005 29.5 10.2 30 21-50 27-56 (191)
288 TIGR01324 cysta_beta_ly_B cyst 40.2 5 0.00011 46.5 -2.2 49 394-451 320-372 (377)
289 TIGR00087 surE 5'/3'-nucleotid 39.4 1.9E+02 0.0042 31.3 9.9 30 22-53 6-35 (244)
290 PRK12446 undecaprenyldiphospho 37.4 1.9E+02 0.0042 33.0 10.2 28 279-306 91-121 (352)
291 cd00561 CobA_CobO_BtuR ATP:cor 37.2 3.1E+02 0.0068 27.6 10.3 29 22-50 8-36 (159)
292 TIGR00725 conserved hypothetic 36.5 54 0.0012 33.0 4.8 38 276-313 88-129 (159)
293 cd02037 MRP-like MRP (Multiple 36.4 1.9E+02 0.0042 28.8 9.0 37 18-54 2-38 (169)
294 PF05014 Nuc_deoxyrib_tr: Nucl 36.2 39 0.00084 31.7 3.5 35 275-309 57-99 (113)
295 TIGR00730 conserved hypothetic 36.0 67 0.0014 33.0 5.4 39 275-313 92-140 (178)
296 PF03641 Lysine_decarbox: Poss 35.4 74 0.0016 30.9 5.4 39 275-313 49-98 (133)
297 COG2327 WcaK Polysaccharide py 33.9 1.2E+02 0.0026 35.1 7.4 70 275-350 281-351 (385)
298 COG1797 CobB Cobyrinic acid a, 32.9 68 0.0015 37.4 5.3 40 18-57 3-42 (451)
299 cd01425 RPS2 Ribosomal protein 31.9 2E+02 0.0043 29.9 8.3 31 116-146 125-158 (193)
300 TIGR00708 cobA cob(I)alamin ad 31.4 4E+02 0.0086 27.3 10.0 30 21-50 10-39 (173)
301 PF02441 Flavoprotein: Flavopr 31.2 57 0.0012 31.4 3.9 35 17-53 2-36 (129)
302 PRK06849 hypothetical protein; 30.8 1.9E+02 0.0041 33.5 8.8 23 32-54 16-38 (389)
303 PRK01077 cobyrinic acid a,c-di 30.7 2.8E+02 0.0061 32.9 10.3 40 13-54 3-42 (451)
304 PRK12815 carB carbamoyl phosph 30.0 3.2E+02 0.007 36.4 11.6 24 31-54 576-599 (1068)
305 KOG3339 Predicted glycosyltran 29.9 1.8E+02 0.004 29.9 7.1 33 16-50 39-71 (211)
306 PRK08114 cystathionine beta-ly 29.5 11 0.00023 44.0 -1.9 46 400-451 342-389 (395)
307 KOG2941 Beta-1,4-mannosyltrans 28.1 9.5E+02 0.021 27.5 22.7 118 221-348 252-404 (444)
308 cd03109 DTBS Dethiobiotin synt 27.2 84 0.0018 30.5 4.3 36 18-53 1-36 (134)
309 PRK05967 cystathionine beta-ly 26.4 12 0.00027 43.5 -2.0 24 424-451 362-387 (395)
310 PRK08305 spoVFB dipicolinate s 25.5 1E+02 0.0022 32.2 4.7 36 16-53 6-42 (196)
311 PRK00994 F420-dependent methyl 25.2 83 0.0018 33.5 3.9 37 111-147 53-96 (277)
312 PRK07414 cob(I)yrinic acid a,c 24.5 4E+02 0.0088 27.4 8.7 30 21-50 26-55 (178)
313 KOG0832 Mitochondrial/chloropl 24.5 74 0.0016 33.7 3.4 108 25-144 89-202 (251)
314 COG2873 MET17 O-acetylhomoseri 23.4 12 0.00026 42.3 -2.7 37 411-451 383-421 (426)
315 TIGR01012 Sa_S2_E_A ribosomal 23.1 99 0.0021 32.3 4.0 30 117-146 107-139 (196)
316 TIGR00162 conserved hypothetic 23.0 2.7E+02 0.0059 28.8 7.3 59 614-682 100-160 (188)
317 PLN03064 alpha,alpha-trehalose 22.7 1.8E+02 0.0038 37.9 6.9 68 274-351 454-529 (934)
318 PF06722 DUF1205: Protein of u 22.6 1.2E+02 0.0026 27.8 4.1 50 216-265 33-97 (97)
319 PRK04020 rps2P 30S ribosomal p 22.4 1E+02 0.0022 32.4 4.0 30 117-146 113-145 (204)
320 PF11071 DUF2872: Protein of u 21.9 1.1E+02 0.0024 29.6 3.6 34 275-308 68-109 (141)
321 PF02606 LpxK: Tetraacyldisacc 21.6 3E+02 0.0064 31.3 7.8 31 23-53 44-74 (326)
322 TIGR01369 CPSaseII_lrg carbamo 21.6 4.2E+02 0.009 35.3 10.3 24 31-54 575-598 (1050)
323 PF05728 UPF0227: Uncharacteri 21.5 4.7E+02 0.01 27.0 8.7 35 111-145 50-88 (187)
324 COG4088 Predicted nucleotide k 21.3 88 0.0019 32.9 3.2 32 21-52 6-37 (261)
325 PRK05920 aromatic acid decarbo 21.2 1.4E+02 0.0031 31.4 4.8 35 17-53 5-39 (204)
326 cd01980 Chlide_reductase_Y Chl 21.1 1.2E+02 0.0027 35.5 4.9 34 111-146 343-376 (416)
327 PF00448 SRP54: SRP54-type pro 20.8 6.9E+02 0.015 25.9 9.9 35 20-54 5-39 (196)
328 cd05212 NAD_bind_m-THF_DH_Cycl 20.8 3.8E+02 0.0082 26.4 7.4 65 212-289 17-81 (140)
329 TIGR01917 gly_red_sel_B glycin 20.8 1.9E+02 0.0042 33.6 6.1 40 105-144 63-113 (431)
330 TIGR01918 various_sel_PB selen 20.6 2E+02 0.0043 33.6 6.1 39 106-144 64-113 (431)
331 PF01993 MTD: methylene-5,6,7, 20.4 1.3E+02 0.0028 32.1 4.2 36 111-146 52-94 (276)
No 1
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.1e-76 Score=638.77 Aligned_cols=382 Identities=30% Similarity=0.468 Sum_probs=324.6
Q ss_pred HHHHHHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCC
Q 001947 478 RQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGP 557 (992)
Q Consensus 478 ~~~~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (992)
...+-...|...|+..++...++|||||||||||+||+||+|+|||||.++++++.+++|.++++++
T Consensus 5 ~~~~~~~~f~~~f~~~~~~~~~~aPGRvNLIGEHtDYn~G~VlP~Ain~~t~v~v~~r~d~~v~l~s------------- 71 (390)
T COG0153 5 LKEKLQALFAEHFGYVEPTVTAFAPGRVNLIGEHTDYNGGFVLPCAINYGTYVAVAKRDDGKVRLYS------------- 71 (390)
T ss_pred HHHHHHHHHHHHhcccCcceEecCCceEEeeccceeccCceEEEEEeecceEEEEEEccCceEEEEe-------------
Confidence 3445566777888865777899999999999999999999999999999999999999998766543
Q ss_pred CCeEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEe
Q 001947 558 MPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSS 637 (992)
Q Consensus 558 ~~~i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s 637 (992)
.+ +.+....+..+ ++ +. ..+..+|.||++|++.. +++.|+.+ +|+++.|.|
T Consensus 72 --------~n--~~~~~~~~~~~-~d-------~~---------~~~~~~W~nYvkgvi~~-l~~~g~~~-~G~~i~i~g 122 (390)
T COG0153 72 --------AN--FGNAGDIFFLL-LD-------IA---------KEKIDDWANYVKGVIKA-LQKRGYAF-TGLDIVISG 122 (390)
T ss_pred --------CC--Cccccceeecc-hh-------hc---------ccccchhhhhHHHHHHH-HHhcCCCc-CCeeEEEec
Confidence 32 11111112111 11 11 13447999999999886 56789998 799999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceee
Q 001947 638 AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGV 717 (992)
Q Consensus 638 ~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~ 717 (992)
+||.|+|||||||++||++.++..+++.++++.+|+++|+++||+|+|++||+|||+++.||+.++++++||+++++ ++
T Consensus 123 nIP~GaGLSSSAAleva~~~al~~l~~~~~~k~~la~i~q~AEn~fvGvn~G~mDQ~~s~~G~~~~al~ld~~~l~~-~~ 201 (390)
T COG0153 123 NIPIGAGLSSSAALEVAVALALQRLFNLPLDKAELAKIAQVAENQFVGVNCGIMDQLASAFGKKDHALLLDCRTLEY-EP 201 (390)
T ss_pred CCCCCCCcCchHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhccCCcCchHHHHHHHhCCCCcEEEEEcccCce-EE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987 89
Q ss_pred ecCCCC-eEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHH
Q 001947 718 VEIPSH-IRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYL 796 (992)
Q Consensus 718 v~~p~~-~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L 796 (992)
+|+|.+ +.|||+||+++|.++.++||.||++|.- +.+.|+. .++.|
T Consensus 202 ~~~p~~~~~ivI~ns~vkr~la~seYn~Rr~ece~-------------------------------A~~~l~~--~~~~L 248 (390)
T COG0153 202 VPFPVGGVSIVIVNSNVKRELADSEYNERRAECEE-------------------------------AAEFLGV--SIKSL 248 (390)
T ss_pred eccCccceEEEEecCCCccccchhHHHHHHHHHHH-------------------------------HHHHHHH--hhhhh
Confidence 999965 9999999999999999999999999832 3333333 25789
Q ss_pred hcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHH
Q 001947 797 CNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSL 876 (992)
Q Consensus 797 ~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~l 876 (992)
++++.+.|.+. ++.+. . |+ .+++|++|+++||+||.++..+|+++ |+..|
T Consensus 249 ~d~~~~~~~~~-----~~~i~----------------~-~~----~~~rRa~hvv~En~Rvl~a~~Al~~~----dl~~f 298 (390)
T COG0153 249 RDVTDEEFAAL-----QAEIE----------------V-DP----KIARRARHVVTENQRVLEAAKALRSG----DLTEF 298 (390)
T ss_pred hhcCHHHHHhh-----hhhcc----------------c-ch----HHHHHHHHHHhHHHHHHHHHHHHHcC----CHHHH
Confidence 99998888763 11111 0 11 26789999999999999999999997 99999
Q ss_pred HHHHHHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHH
Q 001947 877 GELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRY 955 (992)
Q Consensus 877 G~lm~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y 955 (992)
|+||++||.|||+ |+|||||+|+||++|.. ..|++||||||||||||+|+|.+++. .++++++|.++|
T Consensus 299 G~Lm~~SH~slrddyevt~pElD~lve~a~~----------~~G~~GaRmTGaGfGGc~IaLv~~~~-v~~~~e~v~~~y 367 (390)
T COG0153 299 GELMNESHESLRDDYEVTCPELDTLVEIALA----------AGGAYGARMTGAGFGGCVIALVPNDD-VEAVAEAVAEEY 367 (390)
T ss_pred HHHHHHHHHHHHhcccccchhHHHHHHHHHH----------cCCcccceecCCCCCceEEEEechhh-HHHHHHHHHHhH
Confidence 9999999999999 69999999999999986 26889999999999999998887553 479999999999
Q ss_pred HhhcCCCCeEEee-cCCCCcee
Q 001947 956 KDATGYLPLIIEG-SSPGAGKF 976 (992)
Q Consensus 956 ~~~~g~~~~~~~~-~~~Ga~~~ 976 (992)
++.+|+++.+|++ .++|++++
T Consensus 368 ~~~~g~k~~~yv~~~~~G~~~~ 389 (390)
T COG0153 368 EKVTGLKAAFYVVEASQGAGVC 389 (390)
T ss_pred HhhcCccccEEEEeccCCcccc
Confidence 9999999999998 79998864
No 2
>PTZ00290 galactokinase; Provisional
Probab=100.00 E-value=1.3e-67 Score=604.70 Aligned_cols=389 Identities=22% Similarity=0.338 Sum_probs=301.2
Q ss_pred HHHHHHHhccCCCCCc---e--EEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCC
Q 001947 480 MRERKAAAGLFNWEEE---I--FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKG 554 (992)
Q Consensus 480 ~~~~~~~~~~f~~~~~---~--~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~ 554 (992)
.+-+..|...||.+++ + ++++||||||||||||||+||+||||||+++|+|+++++++..
T Consensus 16 ~~l~~~F~~~fG~~p~~~~~~~~~~~APGRVnLIGEHtDYngG~VLp~AId~~~~va~~~~~~~~--------------- 80 (468)
T PTZ00290 16 STLKPIFLETFKVENDADVEWLLFTFAPGRVNFIGEHVDYMGGYVCPAAVLEGCHILVGRVKHFC--------------- 80 (468)
T ss_pred HHHHHHHHHHhCCCcccccceeEEEeccceeeecccccccCCCeeeeccccCcEEEEEeecCCCC---------------
Confidence 3456678899997553 2 7889999999999999999999999999999999998874321
Q ss_pred CCCCCeEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCC----CCC
Q 001947 555 QGPMPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF----EDS 630 (992)
Q Consensus 555 ~~~~~~i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~----~~g 630 (992)
.+.+++.+.. + ..|+++ .... ......|.||++|++..++++.|..+ ..|
T Consensus 81 ---~~~i~~~~~~----~--~~~~~~--~~~~---------------~~~~~~W~nYv~gv~~~~l~~~g~~~~~~~~~G 134 (468)
T PTZ00290 81 ---DHKLRFATET----D--EHFVLD--HLGG---------------AKHNKAWTTFVRGAATLRLNRLGVAIDAPSLQG 134 (468)
T ss_pred ---CCeEEEEECC----C--ceeecC--cccc---------------cCCcccHHHHHHHHHHHHHHHhCCCcccCCCCC
Confidence 1234443221 1 123222 1100 12336899999999987777778742 269
Q ss_pred EEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCC-----C------------C---CHHHHHHHHHHHhccccCCCCCc
Q 001947 631 ISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGL-----N------------I---HPRDLALLCQKVENHIVGAPCGV 690 (992)
Q Consensus 631 ~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~-----~------------l---~~~el~~la~~~E~~~~G~~~G~ 690 (992)
|++.|.|+||.|+|||||||++||++.|++.+++. . + +..+|+.+|+++||.++|+|||+
T Consensus 135 ~d~~i~gdVP~GaGLSSSAAleva~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lA~~aqraEn~~vGv~cGi 214 (468)
T PTZ00290 135 VCMVVHGTLPMGAGMSASASFGVALLNAINTVVTRRYKGCPTSPGRRYSILPPMSKEELIELAKQARRIETEFCGVNVGI 214 (468)
T ss_pred eEEEEeCCCCCCCCcchHHHHHHHHHHHHHHHhhhhccccccccccccccccccCcccHHHHHHHHHHHHHhhcCCCcch
Confidence 99999999999999999999999999999998732 1 2 34899999999999999999999
Q ss_pred cchhhhhccCcceEEEEeecCccceeeecCC----CCeEEEEEeCCCccccCCC---CCcchhhhhhcchhhhhhhcccc
Q 001947 691 MDQMASACGEANKLLAMVCQPAELLGVVEIP----SHIRFWGIDSGIRHSVGGA---DYGSVRAGAFMGRKMIKSTASGM 763 (992)
Q Consensus 691 ~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p----~~~~~vl~dsgi~~~~~~~---~y~~rr~~~~~~~~~i~~~a~~~ 763 (992)
|||+++++|+.++++++||+++++ ++++++ .++.|||+||+++|+..++ +||.||++|..+.+.+... .
T Consensus 215 MDQ~asa~g~~~~al~iD~~~l~~-~~v~l~~~~~~~~~~vV~nS~v~h~l~~s~~~~Yn~Rr~ece~a~~~L~~~---~ 290 (468)
T PTZ00290 215 MDQFISAFAEEDKFMFLDCKSLTF-ESHDMTPLLGDGACFLLIDSMIKHDLLGGTAGMYNTVRSDQEGAQKKIGKH---R 290 (468)
T ss_pred hhHHHHHhCCCCcEEEEecCCCeE-EEeccCCCCCCCcEEEEEeCCCcchhccccchhhHHHHHHHHHHHHHhccc---c
Confidence 999999999999999999999876 678874 4799999999999998866 9999999995443333110 0
Q ss_pred CCccCCCCCCCCCCCcchhhhhHHHHhhhh-HHHhcC--C---------hHHHHHHHhhcCCccchhhhhhhhcCCCCCC
Q 001947 764 LPQSLPSSNGLNNIEPEVDGVELLEAEASL-DYLCNL--S---------PHRFEALYAKNIPESIVGEEFSKNYGDHNDP 831 (992)
Q Consensus 764 l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~L~~~--~---------~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~ 831 (992)
+. .+ ..||++ . +..+.+.+...+|+
T Consensus 291 -----------------------l~---~~~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~----------------- 327 (468)
T PTZ00290 291 -----------------------YR---GKPFTFSDLVRNPKKYTFDGDVVAFMESCKPLMTP----------------- 327 (468)
T ss_pred -----------------------cc---chhhhHHHhhhccccccccccHHHHHHHhhhcCCH-----------------
Confidence 00 01 134433 1 11221111111211
Q ss_pred ceecCCCccccccccccccchhhhHHHHHHHHHhcc---CChhHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHH
Q 001947 832 VTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAA---ASDDQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEI 907 (992)
Q Consensus 832 ~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~---~~~~d~~~lG~lm~~sH~slr~-~~vs~~~lD~lv~~a~~~ 907 (992)
.+++|++|+|+||.||.+|+++|++. ....+++.||+||++||.|||+ +|||||++|.||+.+.+.
T Consensus 328 ----------~~~~Ra~HVitEn~RV~~a~~al~~~~~l~~~~~~~~lG~lm~~sh~sL~~~~~vS~~elD~lv~~~~~~ 397 (468)
T PTZ00290 328 ----------GEFERGTYNIMEQIRTLEFIKLNDPELPLSREERFRKAGEILNAGHQGMRDLMKITTPELDFIHELINEE 397 (468)
T ss_pred ----------HHHHHHHHHhhHHHHHHHHHHHHHhhhhcccccHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHh
Confidence 26789999999999999999999621 0124799999999999999999 699999999999987541
Q ss_pred hhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee-cCCCCceeE
Q 001947 908 QHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG-SSPGAGKFG 977 (992)
Q Consensus 908 ~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~-~~~Ga~~~~ 977 (992)
.|++||||||||||||+++|.+.+. .+++++++.+.|++++|.+|.+|.+ +++|++++.
T Consensus 398 ----------~G~~GaRlTGaG~GGc~i~Lv~~~~-~~~~~~~v~~~y~~~~g~~~~~~~~~~~~Ga~~~~ 457 (468)
T PTZ00290 398 ----------KGVAGGRMMGGGFGGCIILLLKKNA-VDRVVAHVREKFKARFGVENDVYPVVAGDGAFVVS 457 (468)
T ss_pred ----------CCCcEEEEecCCCceEEEEEechhh-HHHHHHHHHHHHHHhhCCCCcEEEEecCCCcEEEe
Confidence 6999999999999999998876654 3789999999999999999999998 799999873
No 3
>PLN02865 galactokinase
Probab=100.00 E-value=1.2e-67 Score=599.86 Aligned_cols=391 Identities=20% Similarity=0.275 Sum_probs=316.6
Q ss_pred HHHHHHHhccCCCCCc-eEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCC
Q 001947 480 MRERKAAAGLFNWEEE-IFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPM 558 (992)
Q Consensus 480 ~~~~~~~~~~f~~~~~-~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 558 (992)
.+-+..|...||.+++ ..+++|||||||||||+||+||+||||||+++|++++++++++++++
T Consensus 13 ~~l~~~F~~~fg~~p~~~~~~~APGRVnlIGEHtDYngG~VLp~AI~~~~~va~~~~~~~~i~v---------------- 76 (423)
T PLN02865 13 DEIRERVAAMSGRNSGEVRVVVSPYRICPLGAHIDHQGGTVSAMTINKGILLGFVPSGDPEVLL---------------- 76 (423)
T ss_pred HHHHHHHHHHhCCCcccceEEEcCcceecccccccCCCCeEEeEEeeccEEEEEEECCCCEEEE----------------
Confidence 3556788899997554 36889999999999999999999999999999999999999876544
Q ss_pred CeEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeC
Q 001947 559 PVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSA 638 (992)
Q Consensus 559 ~~i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~ 638 (992)
.|.+ +.+ .+++++++.. .|+.+. .....+...|.||++|++..+. +.|..+..||++.|.|+
T Consensus 77 -----~s~~--~~~---~~~~~~~~~~---~~~~~~----~~~~~~~~~W~~Yv~gv~~~l~-~~g~~~~~G~~~~v~g~ 138 (423)
T PLN02865 77 -----RSAQ--FEG---EVRFRVDEIQ---HPIANV----SSDSKEESNWGDYARGAVYALQ-SRGHALSQGITGYISGS 138 (423)
T ss_pred -----EECC--CCC---ceEEeccccc---cccccc----cccCCCCCCHHHHHHHHHHHHH-HcCCCCCCceEEEEECC
Confidence 3332 111 1333332210 011000 0012345789999999999764 67776546999999999
Q ss_pred C-CCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceee
Q 001947 639 V-PEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGV 717 (992)
Q Consensus 639 i-P~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~ 717 (992)
| |.|+|||||||++||++.|++.+++..+++++++++|+++|+.++|+|||+|||+++++|..++++++||+++.+ +.
T Consensus 139 vpP~gsGLsSSAAl~va~~~al~~~~~~~~~~~~la~~a~~~E~~~~G~~~G~mDQ~as~~~~~g~~~~iDf~~l~~-~~ 217 (423)
T PLN02865 139 EGLDSSGLSSSAAVGVAYLLALENANNLTVSPEDNIELDRLIENEYLGLRNGILDQSAILLSRYGCLTFMDCKTLDH-KL 217 (423)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccccHHHHHhcccCceEEEEccCCCc-ce
Confidence 9 579999999999999999999999999999999999999999999999999999999999999999999999876 67
Q ss_pred ecCC-------CCeEEEEEeCCCccccC-CCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHH
Q 001947 718 VEIP-------SHIRFWGIDSGIRHSVG-GADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEA 789 (992)
Q Consensus 718 v~~p-------~~~~~vl~dsgi~~~~~-~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 789 (992)
+++| .++.|+++||+++|... +++||.||.+|..+.+++.. +++.
T Consensus 218 vpl~~~~~~~~~~~~ivv~~s~~~h~l~~~~~Yn~Rr~Ec~~aa~~l~~--------~~~~------------------- 270 (423)
T PLN02865 218 VSLQFQQPGGEKPFKILLAFSGLRHALTNKPGYNLRVSECQEAARFLLE--------ASGN------------------- 270 (423)
T ss_pred eecCcccccCCCCeEEEEEeCCCchhhcccchhhHHHHHHHHHHHHHHH--------hcCC-------------------
Confidence 7765 46899999999999977 78999999999654444421 1100
Q ss_pred hhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCC
Q 001947 790 EASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAAS 869 (992)
Q Consensus 790 ~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~ 869 (992)
......||+++.+++.... ..+++ .+++|++|+++||.||.+++++|+++
T Consensus 271 ~~~~~~Lr~~~~~~~~~~~-~~l~~---------------------------~l~~Ra~Hv~~E~~Rv~~~~~al~~~-- 320 (423)
T PLN02865 271 DELEPLLCNVEPEVYEAHK-CKLEA---------------------------VLARRAEHYFSENMRVIKGVEAWASG-- 320 (423)
T ss_pred ccchhhhhcCCHHHHHHHH-hhcCH---------------------------HHHHHHHHHHHHHHHHHHHHHHHHhC--
Confidence 0013568888888776531 22322 15789999999999999999999996
Q ss_pred hhHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHH
Q 001947 870 DDQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQV 948 (992)
Q Consensus 870 ~~d~~~lG~lm~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~ 948 (992)
|++.||+||++||.|||+ |+||||++|.||+.+++ ..|++|+||||||||||+++|++.+. .++++
T Consensus 321 --d~~~~g~lm~~sh~Slrd~yevS~~eld~lv~~a~~----------~~Ga~GaR~tGgGfGGc~vaLv~~~~-~~~~~ 387 (423)
T PLN02865 321 --NLEEFGKLISASGLSSIENYECGCEPLIQLYEILLK----------APGVYGARFSGAGFRGCCVAFVDAEM-AEEAA 387 (423)
T ss_pred --CHHHHHHHHHHhhhhHHhhccCCcHHHHHHHHHHHh----------cCCCeEEEEeccCCccEEEEEEchhH-HHHHH
Confidence 999999999999999999 69999999999999987 25999999999999999998876543 47899
Q ss_pred HHHHHHHHhh-------cCCCCeEEee-cCCCCce
Q 001947 949 LEIQQRYKDA-------TGYLPLIIEG-SSPGAGK 975 (992)
Q Consensus 949 ~~i~~~y~~~-------~g~~~~~~~~-~~~Ga~~ 975 (992)
++|.++|+++ ++.++.+|.+ +++|+++
T Consensus 388 ~~v~~~Y~~~~p~~~~~~~~~~~~~~~~p~~Ga~~ 422 (423)
T PLN02865 388 SFVRDEYEKAQPELASNINGDKPVLICEAGDCARV 422 (423)
T ss_pred HHHHHHHHhhccccccccCCCCcEEEEecCCCccc
Confidence 9999999985 5899999998 7999875
No 4
>PLN02521 galactokinase
Probab=100.00 E-value=8.5e-64 Score=580.98 Aligned_cols=421 Identities=23% Similarity=0.359 Sum_probs=313.5
Q ss_pred HHHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCc-chhhhhhhhhhccCCCCCCCCC
Q 001947 481 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISP-SKQRLWKHALARHNDKGQGPMP 559 (992)
Q Consensus 481 ~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~ 559 (992)
+-...|...||.+ |.++++|||||||||||+||+||+||||||+++++|+++++++ ++++
T Consensus 34 ~l~~~F~~~fg~~-p~~~~~APGRVnLiGEHtDy~gg~vLp~AI~~~~~v~~~~~~~~~~i~------------------ 94 (497)
T PLN02521 34 RLKAAFVEVYGAK-PDLFARSPGRVNLIGEHIDYEGYSVLPMAIRQDTIVAIRRAEGSKKLR------------------ 94 (497)
T ss_pred HHHHHHHHHHCCC-CCEEEECCceEEEeccceeecCCeEEEEEEcCcEEEEEEEcCCCCEEE------------------
Confidence 3455688999974 5579999999999999999999999999999999999999986 4433
Q ss_pred eEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHH----HHHHHHHHHHhCCCC--CCCEEE
Q 001947 560 VLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYV----AGTILVLMTELGVRF--EDSISM 633 (992)
Q Consensus 560 ~i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv----~~~i~~~~~~~g~~~--~~g~~i 633 (992)
+.|.... . +.+.++++... + .......|.||+ .+++..+ ++.+..+ ..|+++
T Consensus 95 ---i~s~~~~--~--~~~~~~~~~~~----~----------~~~~~~~W~nYv~~~~~gv~~~l-~~~~~~~~~~~g~~i 152 (497)
T PLN02521 95 ---IANVNDK--Y--TTCTFPADPDQ----E----------VDLANHKWGNYFICGYKGVFEFL-KSKGVDVGPPVGLDV 152 (497)
T ss_pred ---EEECCCC--C--CceeeecCccc----c----------cccccccHHHHHHHHHHHHHHHH-HHhccccCCCCCeEE
Confidence 3333210 0 11122222110 0 012345799999 6666653 3445432 149999
Q ss_pred EEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCcc
Q 001947 634 LVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE 713 (992)
Q Consensus 634 ~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~ 713 (992)
.|.|+||+|+|||||||++||++.|++.+++.++++++++++|+++|+ +.|.+||+|||+++++|+.|+++++||+++.
T Consensus 153 ~i~s~IP~gsGLgSSAA~~vA~~~al~~~~~~~l~~~~la~la~~~E~-~~g~~~g~mDq~as~~g~~g~al~~d~~~l~ 231 (497)
T PLN02521 153 VVDGTVPTGSGLSSSAALVCSAAIAIMAALGLNFTKKEVAQFTCKCER-HIGTQSGGMDQAISIMAQQGVAKLIDFNPVR 231 (497)
T ss_pred EEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhC-ccCCCCChHHHHHHHhcCCCcEEEEecCCCc
Confidence 999999999999999999999999999999999999999999999999 5788899999999999999999999999987
Q ss_pred ceeeecCCCCeEEEEEeCCCccc---cCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHh
Q 001947 714 LLGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE 790 (992)
Q Consensus 714 ~~~~v~~p~~~~~vl~dsgi~~~---~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 790 (992)
+ +.+++|.++.|||+||+++|. +++++||.||++|..+.+++.. +.+. +. ++ ..
T Consensus 232 ~-~~v~~p~~~~~vv~~s~v~~~k~~~a~~~Yn~R~~ec~~Aa~~L~~--------~~~~----~~----~~------~~ 288 (497)
T PLN02521 232 A-TDVQLPAGGTFVIANSLAESNKAVTAATNYNNRVVECRLAAIVLAV--------KLGM----SA----EE------AI 288 (497)
T ss_pred e-EEeecCCCcEEEEEECCCcccccccccccccHHHHHHHHHHHHHHh--------hcCC----cc----hh------cc
Confidence 6 789999899999999997665 8888999999999766555532 1110 00 00 00
Q ss_pred hhhHHHhcCCh-----------HHHHHHHhhcCCccc-hhhhh--------hhhcCCCCCCceecCCCcccccccccccc
Q 001947 791 ASLDYLCNLSP-----------HRFEALYAKNIPESI-VGEEF--------SKNYGDHNDPVTVIDPKRTYFVRAPVCHP 850 (992)
Q Consensus 791 ~~~~~L~~~~~-----------~~~~~~~~~~lp~~i-~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~r~~h~ 850 (992)
..+..||++.. ..+...+...+++.. +.+++ .+.+.++.+.+++++..+.|.+++|++|+
T Consensus 289 ~~~~~Lrd~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Ra~Hv 368 (497)
T PLN02521 289 SKVKTLSDVEGLCVSFAGSHGSSDPAVAVKELLHEGPYTAEEIEEILGESLTSIFKNSPTSLAVLKAAKHFKLHQRAVHV 368 (497)
T ss_pred cccCCHHHHHHHHhhhcccccchhhHHHhhhhhccccCCHHHHHHHhCCcHHHHhhccccccccccccchhHHhhhhhhe
Confidence 00112222200 000011111122111 11111 11222333455566666778899999999
Q ss_pred chhhhHHHHHHHHHhccCCh-hHHHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeecc
Q 001947 851 IYENFRVKAFKALLTAAASD-DQLTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGG 928 (992)
Q Consensus 851 v~E~~Rv~~~~~~l~~~~~~-~d~~~lG~lm~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGa 928 (992)
|+||.||.+|+++|+++.++ ++++.||+||++||.|||+ ++||||++|.|+++|++ .|++|||||||
T Consensus 369 v~E~~RV~~~~~al~~~~~~~~~~~~lg~lm~~sh~slr~~~~vS~~elD~lv~~a~~-----------~Ga~GaRltGa 437 (497)
T PLN02521 369 YSEAKRVHAFRDTVSSSLSEEEKLKKLGDLMNESHYSCSVLYECSCPELEELVKVCRD-----------NGALGARLTGA 437 (497)
T ss_pred ecHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHhhccCCCcHHHHHHHHHHHh-----------cCCcEEEECCC
Confidence 99999999999999886333 3599999999999999998 49999999999999997 69999999999
Q ss_pred ccCceEEEEccCCcccHHHHHHHHHHHHhh---------cCCCCeEEee-cCCCCceeEE
Q 001947 929 GSGGTICVIGRNSLRSSEQVLEIQQRYKDA---------TGYLPLIIEG-SSPGAGKFGH 978 (992)
Q Consensus 929 G~GG~vi~l~~~~~~~~~~~~~i~~~y~~~---------~g~~~~~~~~-~~~Ga~~~~~ 978 (992)
|||||+++|++.+. .+++++.+.++|+++ ++..+.+|.+ +++||+++.+
T Consensus 438 G~GG~~i~lv~~~~-~~~~~~~l~~~y~~~~~~~~~~~~~~~~~~~~~~~p~~Ga~~~~~ 496 (497)
T PLN02521 438 GWGGCAVALVKEAI-VPQFILALKEKFYKSRIEKGVIKEEDLGLYVFASKPSSGAAILKF 496 (497)
T ss_pred CCCeEEEEEECHHH-HHHHHHHHHHHHHhhccccccccccCCCCcEEEEecCCCceEeec
Confidence 99999998887644 368999999999987 4889999998 7999987654
No 5
>PRK05322 galactokinase; Provisional
Probab=100.00 E-value=7.1e-63 Score=563.85 Aligned_cols=378 Identities=24% Similarity=0.365 Sum_probs=312.3
Q ss_pred HHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeE
Q 001947 482 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 561 (992)
Q Consensus 482 ~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 561 (992)
....|...||.+ |..+++|||||+|||||+||+||+||++||+++++++++++++++++
T Consensus 6 ~~~~f~~~fg~~-p~~~~~APgRv~L~GEH~d~~g~~vl~~AI~~~~~v~~~~~~~~~i~-------------------- 64 (387)
T PRK05322 6 LKKKFAEVFGEE-AEDVFFSPGRINLIGEHTDYNGGHVFPAAITLGTYGAARKRDDKKVR-------------------- 64 (387)
T ss_pred HHHHHHHHhCCC-CceEEEcCceeEecccceeecCceeeeeeccceEEEEEEECCCCEEE--------------------
Confidence 345678899964 55788999999999999999999999999999999999999886544
Q ss_pred EEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCC
Q 001947 562 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPE 641 (992)
Q Consensus 562 ~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~ 641 (992)
+.|.+ +. ....++++++++. ......|.+|+++++..+ +..+.++..|+++.|.|+||+
T Consensus 65 -i~s~~--~~-~~~~~~~~~~~~~----------------~~~~~~w~~y~~gvi~~l-~~~~~~~~~g~~i~i~s~iP~ 123 (387)
T PRK05322 65 -LYSAN--FE-DLGIIEFDLDDLS----------------FDKEDDWANYPKGVLKFL-QEAGYKIDHGFDILIYGNIPN 123 (387)
T ss_pred -EEECC--CC-CCceEEEeccccC----------------CCCccchHHHHHHHHHHH-HHcCCCCCCCEEEEEecCCCC
Confidence 43332 11 0011333333211 123367999999999865 556664437999999999999
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCC
Q 001947 642 GKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP 721 (992)
Q Consensus 642 g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p 721 (992)
|+|||||||++||++.|++.+++.++++++++++|+.+|+.++|+|||+|||+++++||.++++++||++.+. +.++++
T Consensus 124 gsGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~sG~mDq~as~~G~~~~~~~~d~~~~~~-~~~~~~ 202 (387)
T PRK05322 124 GAGLSSSASIELLTGVILKDLFNLDLDRLELVKLGQKTENEFIGVNSGIMDQFAIGMGKKDHAILLDCNTLEY-EYVPLD 202 (387)
T ss_pred CCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhccCCCCcchHHHHHHHhccCCeEEEEecCCCce-EEeccC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998765 677776
Q ss_pred -CCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCC
Q 001947 722 -SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 800 (992)
Q Consensus 722 -~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~ 800 (992)
.++.||++|||++|++.+++||.||.+|..+.+.+ +.......||++.
T Consensus 203 ~~~~~lvv~dsg~~~~~~~~~yn~r~~e~~~a~~~l-------------------------------~~~~~~~~l~~~~ 251 (387)
T PRK05322 203 LGDYVIVIMNTNKRRELADSKYNERRAECEKALEEL-------------------------------QKKLDIKSLGELT 251 (387)
T ss_pred CCCeEEEEEECCCccccCcchhhHHHHHHHHHHHHH-------------------------------hhhcCccchhcCC
Confidence 46789999999999999999999999995433222 2222345678888
Q ss_pred hHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHH
Q 001947 801 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 880 (992)
Q Consensus 801 ~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm 880 (992)
+++++... ..+++ + .+++|++|+++|+.||..+..+|+++ |++.||++|
T Consensus 252 ~~~~~~~~-~~~~~----------------~----------~~~~r~~h~v~e~~r~~~~~~al~~~----d~~~lg~lm 300 (387)
T PRK05322 252 EEEFDEYS-YLIKD----------------E----------TLLKRARHAVTENQRTLKAVKALKAG----DLEKFGRLM 300 (387)
T ss_pred HHHHHHHH-hhcCC----------------H----------HHHHHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHH
Confidence 87776542 22211 0 25789999999999999999999997 999999999
Q ss_pred HHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhc
Q 001947 881 YQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDAT 959 (992)
Q Consensus 881 ~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~ 959 (992)
++||.+|++ +++|+|++|.|++++++ ..|++|+||||||||||++++.+.+. .+++.+.|.+.|++++
T Consensus 301 ~~sh~~L~~~y~~s~~eld~lv~~a~~----------~~Ga~garlsGaG~GG~vial~~~~~-~~~~~~~l~~~y~~~~ 369 (387)
T PRK05322 301 NASHVSLRDDYEVTGLELDTLVEAAWK----------QEGVLGARMTGAGFGGCAIAIVKKDK-VEAFKENVGKAYEEKI 369 (387)
T ss_pred HHhhHHHHhhhcCCCHhHHHHHHHHHh----------cCCccEEEEecCCCceEEEEEEcHHH-HHHHHHHHHHHHHHhc
Confidence 999999996 79999999999999974 16999999999999999998876554 3689999999999999
Q ss_pred CCCCeEEee-cCCCCce
Q 001947 960 GYLPLIIEG-SSPGAGK 975 (992)
Q Consensus 960 g~~~~~~~~-~~~Ga~~ 975 (992)
|.+|.+|.+ +++|+++
T Consensus 370 ~~~~~~~~~~~~~Ga~~ 386 (387)
T PRK05322 370 GYAASFYVAEIGDGARE 386 (387)
T ss_pred CCCCcEEEEecCCCccc
Confidence 999999998 7999875
No 6
>PRK05101 galactokinase; Provisional
Probab=100.00 E-value=1.6e-61 Score=552.48 Aligned_cols=373 Identities=27% Similarity=0.438 Sum_probs=308.1
Q ss_pred HHHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCe
Q 001947 481 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPV 560 (992)
Q Consensus 481 ~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 560 (992)
+-...|...||.+ |.++++|||||||+|||+||+||+||++|||++++|.+++++++++++
T Consensus 6 ~~~~~f~~~fg~~-p~~~~~APgRvnL~GeH~Dy~gg~vL~~AId~~~~v~i~~~~~~~i~v------------------ 66 (382)
T PRK05101 6 KTQSLFAQQFGYP-PTHTIQAPGRVNLIGEHTDYNDGFVLPCAIDYQTVISCAKRDDRIVRV------------------ 66 (382)
T ss_pred HHHHHHHHHhCCC-CCeEEECCceEEEeccceeecCCEEEEEEecccEEEEEEECCCCEEEE------------------
Confidence 4566788899964 557999999999999999999999999999999999999998765443
Q ss_pred EEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCC
Q 001947 561 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVP 640 (992)
Q Consensus 561 i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP 640 (992)
.+...+ .. ...++++. ++ ...+...|.||+++++..+. ..+... .|+++.|.|+||
T Consensus 67 ---~s~~~~--~~--~~~~~~~~------~~---------~~~~~~~w~~yv~~~~~~l~-~~~~~~-~g~~i~i~~~iP 122 (382)
T PRK05101 67 ---IAADYD--NQ--QDEFSLDA------PI---------VPHPEQQWANYVRGVVKHLQ-ERNPDF-GGADLVISGNVP 122 (382)
T ss_pred ---EECCCC--CC--ceEEecCc------cc---------ccCCCCchHHHHHHHHHHHH-HhCCCC-CCeEEEEeCCCC
Confidence 332110 00 11223222 11 01345689999999998764 444443 699999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecC
Q 001947 641 EGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI 720 (992)
Q Consensus 641 ~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~ 720 (992)
+|+|||||||++||++.|++.+++.++++++|+++|+++|+.++|.|||+|||+++++|+.++++++++++.++ ..+++
T Consensus 123 ~gaGLgSSAA~~va~~~al~~~~~~~l~~~~la~~a~~~E~~~~G~~~G~~Dq~~s~~G~~~~~~~~d~~~~~~-~~~~~ 201 (382)
T PRK05101 123 QGAGLSSSASLEVAVGQTFQQLYHLPLSGAEIALNGQEAENQFVGCNCGIMDQLISALGKKDHALLIDCRSLET-KAVPM 201 (382)
T ss_pred CCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCccHHHHHHHcCCCCeEEEEEcCCCce-EEeeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988765 67888
Q ss_pred CCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCC
Q 001947 721 PSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLS 800 (992)
Q Consensus 721 p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~ 800 (992)
|.++.|+|+|||++|++..+.||+||.+|..+.+++ ..+.|++++
T Consensus 202 ~~~~~~vv~~sg~~~~l~~~~y~~r~~e~~~A~~~l-----------------------------------~~~~l~~~~ 246 (382)
T PRK05101 202 PEGVAVVIINSNVKRGLVDSEYNTRRQQCETAARFF-----------------------------------GVKALRDVT 246 (382)
T ss_pred CCCcEEEEEeCCCCccccccchhHHHHHHHHHHHHh-----------------------------------ChHhhhcCC
Confidence 889999999999999988899999998884322111 123466666
Q ss_pred hHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHH
Q 001947 801 PHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELL 880 (992)
Q Consensus 801 ~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm 880 (992)
++++.... ..+|+ .+++|+.|++.||.||.+++.+|+++ |++.||+||
T Consensus 247 ~~~~~~~~-~~l~~---------------------------~~~~r~~h~i~E~~rv~~a~~al~~~----d~~~lG~Lm 294 (382)
T PRK05101 247 LEQFNAVA-AELDP---------------------------VVAKRARHVITENARTLEAASALAAG----DLKRMGELM 294 (382)
T ss_pred HHHHHHHH-hhCCH---------------------------HHHHHHHHHhHHHHHHHHHHHHHHcC----CHHHHHHHH
Confidence 66655432 23332 15678999999999999999999997 999999999
Q ss_pred HHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCc-ccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhh
Q 001947 881 YQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTL-FGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDA 958 (992)
Q Consensus 881 ~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~-~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~ 958 (992)
++||.+||+ ++||||++|.|++++++. .|+ +||||||||||||+++|++.+. .++++++|.++|+++
T Consensus 295 ~~sh~~lr~~~~vS~~eld~lv~~a~~~----------~Ga~gGakltGaG~GG~~ial~~~~~-~~~~~~~~~~~y~~~ 363 (382)
T PRK05101 295 AESHASMRDDFEITVPQIDTLVEIVKAV----------IGDQGGVRMTGGGFGGCIVALVPEEL-VEAVRQAVAEQYEAK 363 (382)
T ss_pred HHHhHHHHhhcCCCCHhHHHHHHHHHhc----------cCCcceEEeccCCCccEEEEEEcHHH-HHHHHHHHHHHHHHh
Confidence 999999996 899999999999999972 376 5889999999999998887654 468999999999999
Q ss_pred cCCCCeEEee-cCCCCce
Q 001947 959 TGYLPLIIEG-SSPGAGK 975 (992)
Q Consensus 959 ~g~~~~~~~~-~~~Ga~~ 975 (992)
+|.+|.+|.+ +++|+++
T Consensus 364 ~~~~~~~~~~~~~~Ga~~ 381 (382)
T PRK05101 364 TGLKETFYVCKASQGAGQ 381 (382)
T ss_pred hCCCCeEEEEecCCCccc
Confidence 9999999998 7999875
No 7
>TIGR00131 gal_kin galactokinase. The galactokinases found by this model are divided into two sets. Prokaryotic forms are generally shorter. The eukaryotic forms are longer because of additional central regions and in some cases are known to be bifunctional, with regulatory activities that are independent of galactokinase activity.
Probab=100.00 E-value=2.8e-60 Score=545.38 Aligned_cols=376 Identities=25% Similarity=0.359 Sum_probs=304.3
Q ss_pred HHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEE
Q 001947 483 RKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQ 562 (992)
Q Consensus 483 ~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~ 562 (992)
...|...||.+ |.++++|||||+|+|||+||+||+||++||++++++.+++++++++++
T Consensus 5 ~~~f~~~fg~~-p~~~~~APgrv~L~GeH~dy~g~~vl~~AI~~~~~v~~~~~~~~~i~i-------------------- 63 (386)
T TIGR00131 5 QKIFASAFGAK-PDFTARAPGRVNLIGEHTDYNDGSVLPCAIDFGTLCAVAVRDDKNVRI-------------------- 63 (386)
T ss_pred HHHHHHHHCCC-CCEEEECCcceEeeccceeeCCceEEeeEeeccEEEEEEECCCCeEEE--------------------
Confidence 45678889974 558899999999999999999999999999999999999998865443
Q ss_pred EEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCC
Q 001947 563 IVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEG 642 (992)
Q Consensus 563 i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g 642 (992)
.+... ......+++++ |.. ......|.+|+++++..+.+ .+.....|+++.|.|+||+|
T Consensus 64 -~~~~~--~~~~~~~~~~~--------~~~---------~~~~~~w~~y~~~~~~~~~~-~~~~~~~g~~i~i~s~iP~g 122 (386)
T TIGR00131 64 -YLANA--DNKFAERSLDL--------PLD---------GSEVSDWANYFKGVLHVAQE-RFNSFPLGADIVCSGNVPTG 122 (386)
T ss_pred -EECCC--CCcceEEECCC--------CCC---------CCCCCCcHhHHHHHHHHHHH-hcCCCCCceEEEEECCCCCC
Confidence 33211 11001122221 100 12236899999999987654 44433369999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCC
Q 001947 643 KGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS 722 (992)
Q Consensus 643 ~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~ 722 (992)
+|||||||++||++.|++.+++.++++++++++++.+|++++|+|||+|||+++++||.+++++++|++.++ ..+++|.
T Consensus 123 sGLgSSAA~~vA~~~al~~~~~~~~~~~~l~~~a~~~E~~~~G~~~g~~Dq~~s~~G~~~~~l~~~~~~~~~-~~~~~~~ 201 (386)
T TIGR00131 123 SGLSSSAAFECAVGAVLQNMGHLPLDSKQILLRIQVAENHFVGVNCGIMDQAASVLGKEDHALLVECRSLKA-TPFKFPQ 201 (386)
T ss_pred CCcchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCccCCCcchHHHHHHHhccCCcEEEEEcCCCce-eeecCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998765 6788886
Q ss_pred -CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCCh
Q 001947 723 -HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 801 (992)
Q Consensus 723 -~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~ 801 (992)
++.|+|+|||++|++++..||.||.+|..+.+++... ....+|++.+
T Consensus 202 ~~~~lvv~~s~~~~~t~~~~y~~r~~e~~~a~~~l~~~--------------------------------~~~~lr~~~~ 249 (386)
T TIGR00131 202 LGIAFVIANTNVKRTLAPSNYNTRRQECTTAANFLAAT--------------------------------DKGALRDFMN 249 (386)
T ss_pred CCeEEEEEeCCCccccccchhHHHHHHHHHHHHHhccc--------------------------------cccchhhCCH
Confidence 8999999999999999999999999985443333210 0124566666
Q ss_pred HHHHHHH--hhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHH
Q 001947 802 HRFEALY--AKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGEL 879 (992)
Q Consensus 802 ~~~~~~~--~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~l 879 (992)
+.+.... ...+++ .+++|++|++.|+.||.+++++|+++ |++.||++
T Consensus 250 ~~~~~~~~~~~~~~~---------------------------~~~~r~~h~v~e~~rv~~~~~al~~~----d~~~lG~l 298 (386)
T TIGR00131 250 EYFARYIARLTKMLP---------------------------LVEERAKHVVSENLRVLKAVKAMKDN----DFKQFGAL 298 (386)
T ss_pred HHHhhhHhhHhhcCH---------------------------HHHhhHheeehHHHHHHHHHHHHHhC----cHHHHHHH
Confidence 5554210 011111 14568999999999999999999986 99999999
Q ss_pred HHHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhh
Q 001947 880 LYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDA 958 (992)
Q Consensus 880 m~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~ 958 (992)
|+++|.+|++ +++|||++|.+++.+.. .+|++||||||||||||+++|++++. .+++++++.++|+++
T Consensus 299 m~~sh~~l~~~~~vs~peld~lv~~a~~----------~~GAlGakltGaG~GG~vial~~~~~-~~~v~~~~~~~y~~~ 367 (386)
T TIGR00131 299 MNESHASCDDDYECTCPEIDELVCSAAL----------VNGSGGSRMTGAGFGGCTVHLVPNEN-VDKVRQAVADKYPKK 367 (386)
T ss_pred HHHhhHHHHHhcCCCCHHHHHHHHHHHh----------cCCCcEEEEecCCCceEEEEEEcHHH-HHHHHHHHHHHHHHh
Confidence 9999999998 69999999999988643 16999999999999999998887544 468999999999989
Q ss_pred cCCCCeEEee-cCCCCce
Q 001947 959 TGYLPLIIEG-SSPGAGK 975 (992)
Q Consensus 959 ~g~~~~~~~~-~~~Ga~~ 975 (992)
+|.++.+|++ +++|++.
T Consensus 368 ~~~~~~~~~~~~~~Ga~~ 385 (386)
T TIGR00131 368 TGLELTFYVIVSKPGAGS 385 (386)
T ss_pred hCCCCcEEEEEECCCcCC
Confidence 9999999998 6889875
No 8
>PRK00555 galactokinase; Provisional
Probab=100.00 E-value=3.8e-60 Score=536.98 Aligned_cols=355 Identities=26% Similarity=0.368 Sum_probs=293.9
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 497 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
++++|||||||||||+||+||+|||+|||++++|++++++++++++ .|.. + + ..
T Consensus 3 ~~~~APGRv~LiGEH~dy~~g~vl~~Ai~~~~~v~~~~~~~~~i~i---------------------~s~~--~-~--~~ 56 (363)
T PRK00555 3 VRYAAPGRINLIGEHTDYNLGFALPIALPQRTVVTFTPEHTDAITA---------------------SSDR--A-D--GS 56 (363)
T ss_pred EEEEcCceEEeecccccCCCCeEEeEEeeccEEEEEEECCCCEEEE---------------------EECC--C-C--Cc
Confidence 5789999999999999999999999999999999999999876543 3321 1 1 01
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 001947 577 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 656 (992)
Q Consensus 577 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 656 (992)
++++++.. ......|.+|+++++..+ ++.|..+ .|+++.|.|+||+|+|||||||++||++
T Consensus 57 ~~~~~~~~-----------------~~~~~~w~~y~~gv~~~l-~~~g~~~-~g~~i~i~s~iP~g~GLgSSAA~~va~~ 117 (363)
T PRK00555 57 ARIPLDTT-----------------PGQVTGWAAYAAGVIWAL-RGAGHPV-PGGAMSITSDVEIGSGLSSSAALECAVL 117 (363)
T ss_pred eEEecCCC-----------------CCCCcchHHHHHHHHHHH-HHcCCCC-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 33332211 122367999999998874 5677765 6999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCC---CeEEEEEeCCC
Q 001947 657 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS---HIRFWGIDSGI 733 (992)
Q Consensus 657 ~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~---~~~~vl~dsgi 733 (992)
.|++.+++.++++++++++|+++|+.++|+|||+|||+++++||.|++++++|++..+ +++++|. ++.|+++|||+
T Consensus 118 ~al~~~~~~~~~~~~la~~a~~aE~~~~G~~~G~~Dq~as~~G~~~~~~~~d~~~~~~-~~v~~~~~~~~~~lvv~~s~~ 196 (363)
T PRK00555 118 GAVGAATGTRIDRLEQARLAQRAENEYVGAPTGLLDQLAALFGAPKTALLIDFRDLTV-RPVAFDPDAAGVVLLLMDSRA 196 (363)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCChhHHHHHHhCCCCeEEEEEcCCCcE-EEeccCCCcCceEEEEEcCCC
Confidence 9999999999999999999999999999999999999999999999999999988665 6777763 46799999999
Q ss_pred ccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCC
Q 001947 734 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 813 (992)
Q Consensus 734 ~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp 813 (992)
+|.+.+..||.||.+|....+.+ ..+.+|++.++.+... ....+
T Consensus 197 ~~~~~~~~y~~rr~~~~~~~~~~-----------------------------------~~~~lr~~~~~~~~~~-~~~~~ 240 (363)
T PRK00555 197 RHRHAGGEYAARRASCERAAADL-----------------------------------GVSSLRAVQDRGLAAL-GAIAD 240 (363)
T ss_pred cccccchhhHHHHHHHHHHHHHh-----------------------------------CccchhcCCHHHHHHH-HhcCC
Confidence 99999999999999883221111 1123555555444331 11111
Q ss_pred ccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhh-cCC
Q 001947 814 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CGL 892 (992)
Q Consensus 814 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~-~~v 892 (992)
+ ..++|++|++.|+.||.+++.+|+++ |++.||++|+++|++||+ ++|
T Consensus 241 -----------------~----------~~~~r~~h~~~e~~~v~~~~~al~~g----d~~~lg~lm~~~h~~lr~~~~v 289 (363)
T PRK00555 241 -----------------P----------IDARRARHVLTENQRVLDFAAALADS----DFTAAGQLLTASHASMRDDFEI 289 (363)
T ss_pred -----------------h----------HHHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHhhHHHHhhcCC
Confidence 0 14579999999999999999999997 999999999999999994 799
Q ss_pred CCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee-cCC
Q 001947 893 GSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG-SSP 971 (992)
Q Consensus 893 s~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~-~~~ 971 (992)
|+|++|.|++.+++ .|++|+||||||||||++++++.+. .+++.+.+.++|+++++.+|++|.+ +++
T Consensus 290 S~~~ld~l~~~a~~-----------~Ga~GaklsGaG~Gg~vial~~~~~-~~~~~~~l~~~y~~~~~~~~~~~~~~~~~ 357 (363)
T PRK00555 290 TTERIDLIADSAVR-----------AGALGARMTGGGFGGCVIALVPADR-AEDVADTVRRAAVTAGYPEPAVSRTYAAP 357 (363)
T ss_pred CChhHHHHHHHHHh-----------cCCeEEEECCCCccCeEEEEEchhH-HHHHHHHHHHHHHHccCCCCcEEEEecCC
Confidence 99999999999987 6999999999999999998887553 4689999999999999999999998 799
Q ss_pred CCcee
Q 001947 972 GAGKF 976 (992)
Q Consensus 972 Ga~~~ 976 (992)
|++.+
T Consensus 358 g~~~~ 362 (363)
T PRK00555 358 GAGEC 362 (363)
T ss_pred CcccC
Confidence 99864
No 9
>PRK03817 galactokinase; Provisional
Probab=100.00 E-value=2e-51 Score=466.91 Aligned_cols=347 Identities=27% Similarity=0.436 Sum_probs=283.8
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 001947 498 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 577 (992)
Q Consensus 498 ~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 577 (992)
.++|||||+|+|||+||+||+||++|||++++|.+++++. +.+.+.. +.. .+
T Consensus 2 ~~~APgrv~L~Geh~d~~~g~~l~~aI~~~~~v~~~~~~~-----------------------~~i~~~~--~~~---~~ 53 (351)
T PRK03817 2 KVKSPGRVNLIGEHTDYNDGYVLPFAINLYTFLEIEKSEK-----------------------FIFYSEN--FNE---EK 53 (351)
T ss_pred EEEeeeeEEEeccceeeCCCeEEEEEecCcEEEEEEeCCe-----------------------EEEEECC--CCC---cE
Confidence 5789999999999999999999999999999999987632 2233321 111 12
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 001947 578 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 657 (992)
Q Consensus 578 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 657 (992)
+++++++ ....+|.+|+.+++..+ ++.+... .|+++.|.|+||.++|||||||++||++.
T Consensus 54 ~~~~~~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~i~s~iP~~~GLgSSaa~~va~~~ 113 (351)
T PRK03817 54 TFELDKL------------------EKLNSWADYIKGVIWVL-EKRGYEV-GGVKGKVSSNLPIGAGLSSSASLEVAVAY 113 (351)
T ss_pred EEeCCcc------------------CCCCchHHHHHHHHHHH-HHcCCCC-CCeEEEEeCCCCCCCCcCcHHHHHHHHHH
Confidence 2333221 12368999999998764 4566654 79999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCcccc
Q 001947 658 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 737 (992)
Q Consensus 658 al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~ 737 (992)
|++.+++.++++++++++|+.+|++++|.|+|+|||+++.+|+.+.++++++++..+ ..+++|.+++|++++||.++.+
T Consensus 114 al~~~~~~~~~~~~l~~~a~~~E~~~~g~~~g~~D~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~vv~~sg~~~~~ 192 (351)
T PRK03817 114 ALNEAYNLNLSKLELALLAREAENEFVGVPCGIMDQFAVAFGKKDHAIFLDTMTLEY-EYVPFPEDYEILVFDTGVKREL 192 (351)
T ss_pred HHHHHhCCCCCHHHHHHHHHHhcccccCCCCcCchhhheeeccCCEEEEEecCCCce-EEEecCCCcEEEEEeCCCcccc
Confidence 999999999999999999999999999999999999999999988888899887654 6788888999999999999988
Q ss_pred CCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccch
Q 001947 738 GGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIV 817 (992)
Q Consensus 738 ~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~ 817 (992)
....||.||..|...++.+. ..++++++.+++ ..+|+.
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~-----------------------------------~~~~~~~~~~~~-----~~l~~~-- 230 (351)
T PRK03817 193 ASSEYNERRQECEEALKILG-----------------------------------KKSSKEVTEEDL-----SKLPPL-- 230 (351)
T ss_pred ccchhHHHHHHHHHHHHHhC-----------------------------------ccchhcCCHHHH-----HhCCHH--
Confidence 88899999877643222111 112233332221 123321
Q ss_pred hhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhh-cCCCCch
Q 001947 818 GEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSA-CGLGSDG 896 (992)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~-~~vs~~~ 896 (992)
+++|+.|+++|+.|+..++.+|+++ |++.||++|++||.++++ +++|+|+
T Consensus 231 -------------------------~~~~~~~~v~e~~r~~~~~~al~~~----d~~~lg~l~~~s~~~l~~~~~~s~p~ 281 (351)
T PRK03817 231 -------------------------LRKRAGYVLRENERVLKVRDALKEG----DIETLGELLTESHWDLADNYEVSCEE 281 (351)
T ss_pred -------------------------HHHHHHHHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHHHHhhcCCCcHH
Confidence 4568999999999999999999997 999999999999999998 7999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee-cCCCCce
Q 001947 897 TDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG-SSPGAGK 975 (992)
Q Consensus 897 lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~-~~~Ga~~ 975 (992)
+|+|++.+++ .|++|+||||||||||++++.++.. .+++++.++++|++.+++.+.+|.+ +++|+++
T Consensus 282 ld~l~~~a~~-----------~GalGaklsGaG~Gg~vlal~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~ 349 (351)
T PRK03817 282 LDFFVEFALE-----------LGAYGARLTGAGFGGSAIALVDKGK-FESIGEELLEEYKKRFGIDPKYFVVESSDGVRK 349 (351)
T ss_pred HHHHHHHHHH-----------cCCCEEEEecCCCCeEEEEEEchHH-HHHHHHHHHHHHHHhcCCCCcEEEEecCCCcee
Confidence 9999999998 6999999999999999998876543 4689999999999899999999988 5688875
Q ss_pred e
Q 001947 976 F 976 (992)
Q Consensus 976 ~ 976 (992)
+
T Consensus 350 ~ 350 (351)
T PRK03817 350 I 350 (351)
T ss_pred C
Confidence 4
No 10
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=414.10 Aligned_cols=408 Identities=24% Similarity=0.301 Sum_probs=283.4
Q ss_pred HHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeE
Q 001947 482 ERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVL 561 (992)
Q Consensus 482 ~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 561 (992)
+-.++-..|+. .|.+++++||||||+|||+||+|+.|+|||||..+.+++.+++|.. +.+
T Consensus 26 ~~~~~~~~~~~-kp~~~a~~PgRVnLiGEHiDy~~~sVlpmaid~~~l~~~~~~~d~~-------------------~sl 85 (489)
T KOG0631|consen 26 EAGAFQAAYGA-KPVFVARAPGRVNLIGEHIDYCGYSVLPMAIDVDTLIAVAPSDDGI-------------------VSL 85 (489)
T ss_pred HHHHHHHhhCC-CceEEEecCCceecccceeeecCceeeeEEeeeeeEEEEEEcCCCc-------------------eeE
Confidence 33455558885 6678999999999999999999999999999999999999999875 235
Q ss_pred EEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHh---CCCCCC--CEEEEEE
Q 001947 562 QIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVRFED--SISMLVS 636 (992)
Q Consensus 562 ~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~---g~~~~~--g~~i~i~ 636 (992)
++.++++++. .+++++... . ..+ ....++|.||+++.+..+.+.. +..... |+.+...
T Consensus 86 ~~tN~~~~f~----~~~~~~p~~-~----~~I--------~~~~~~w~ny~~C~~~g~h~~~~~~~~~~~~~vGl~~l~~ 148 (489)
T KOG0631|consen 86 RLTNFNPDFI----YFKYPLPSI-V----WQI--------DPDVSKWENYFYCGMKGFHEYIKRKPVRFEPPVGLSILND 148 (489)
T ss_pred EEecCCCccc----eeeccCCch-h----ccc--------CCCccchhhhhccchHHHHHHHhccccccCCCcceEEEec
Confidence 5665554432 233333210 0 011 0134789999966666554433 433334 9999999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHHHHHh-CCC--CCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEe--ecC
Q 001947 637 SAVPEGKGVSSSASVEVASMSAIAAAH-GLN--IHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV--CQP 711 (992)
Q Consensus 637 s~iP~g~GLgSSAA~~va~~~al~~~~-~~~--l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~--~~~ 711 (992)
+++|.|+||+||||+.++.+.|...+. |.+ ++++++..++..+| ++.|.++|.|||+++++|..+++++++ +.|
T Consensus 149 g~vPtgsgLsSsaa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae-~~~G~~~gGmdq~asvl~~~~~Al~v~~~~~P 227 (489)
T KOG0631|consen 149 GSVPTGSGLSSSAAWLCAAALATLKLNLGPNFIISKKDLATITVVAE-SYIGLNSGGMDQAASVLAEKGHALLVDPYFTP 227 (489)
T ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHhcCCCcccchhhhhcceEEee-cccCcCCCcHHHHHHHHHhcCceEEecccCCc
Confidence 999999999999999999999988888 777 88999999999888 468999999999999999999999999 346
Q ss_pred ccceeeecCCCCeEEEEEeCCCccc---cCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCC--C-------CCCCc
Q 001947 712 AELLGVVEIPSHIRFWGIDSGIRHS---VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNG--L-------NNIEP 779 (992)
Q Consensus 712 ~~~~~~v~~p~~~~~vl~dsgi~~~---~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~--~-------~~~~~ 779 (992)
... ..+++++.-.|++.+|.+..+ +..+.||.|..++ .+++..+++++..... + .++.-
T Consensus 228 f~~-~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlRv~E~--------~ia~~~la~k~~~~~~~~~~~~~~~~~~~~~ 298 (489)
T KOG0631|consen 228 FRR-SMLKLPDGGVFVIANSLVESNKAETAETNYNLRVVEG--------TIAAGELAAKILVELPAYILRYQLQRAWRGD 298 (489)
T ss_pred ccc-ccccCCCCceEEEechhhhhcchhhhhhhhhceeEee--------ehhhHHHHHHhhcccHHHHHhhhhhhccccc
Confidence 665 577788777999999988765 4567999886554 2233333322221110 0 00000
Q ss_pred chhhhhHHHHhh--hhHHHh--cCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhh
Q 001947 780 EVDGVELLEAEA--SLDYLC--NLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENF 855 (992)
Q Consensus 780 ~~~~~~~l~~~~--~~~~L~--~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~ 855 (992)
..++++.+.... ..+++. .++.++.... + ..+-++|++.+...+ + ++ ....++++|++|++.|+.
T Consensus 299 i~~~~~~~~~~l~~v~~~~~~e~f~~ee~~~~----l--~~~~~~f~~~~~T~~-~---v~-~~~~k~~~rakHv~sea~ 367 (489)
T KOG0631|consen 299 IGEGYERAEEMLGLVEESLKPEGFNIEEVARA----L--GLDTEEFLQSLLTLA-A---VD-LQVKKLYQRAKHVYSEAL 367 (489)
T ss_pred cchhHHHHHHHHHHHHhhcCcCCCCHHHHHHH----h--ccchHHHHHHhcccc-c---hh-hHHHHHHHHHHHHHHHHH
Confidence 011111111000 000000 0111111110 0 011234454443211 1 11 123357889999999999
Q ss_pred HHHHHHHHHhccCChhH--HHHHHHHHHHhhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCc
Q 001947 856 RVKAFKALLTAAASDDQ--LTSLGELLYQCHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGG 932 (992)
Q Consensus 856 Rv~~~~~~l~~~~~~~d--~~~lG~lm~~sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG 932 (992)
||.++..++..++.+.| +..+|+|||+||.|++. +++||||+|+|++++++ .|.+|+|+|||||||
T Consensus 368 rv~q~~~~~~~a~~~~d~~~~~~g~LmneS~~Sc~~~yEcscpel~qL~kiala-----------~g~~gaRlTGaGwGG 436 (489)
T KOG0631|consen 368 RVLQEEKLCARAPGRADGFLADFGRLMNESHRSCDVLYECSCPELDQLCKIALA-----------NGGVGARLTGAGWGG 436 (489)
T ss_pred HHHHHHHHHhcCccchhhhHHHHHHHhhhhhHHHHHHHhcCCHhHHHHHHHHHh-----------cCCccceeecccccc
Confidence 99999999988754444 88999999999999999 59999999999999998 577999999999999
Q ss_pred eEEEEccCCcccHHHHHHHHHHHHhhc
Q 001947 933 TICVIGRNSLRSSEQVLEIQQRYKDAT 959 (992)
Q Consensus 933 ~vi~l~~~~~~~~~~~~~i~~~y~~~~ 959 (992)
|.+.+.+.+. .+.+.+.+.+.|+++.
T Consensus 437 c~v~lvp~d~-~~~~~~~~~~~~Y~ka 462 (489)
T KOG0631|consen 437 CTVALVPADL-VDFAVAALKEIYYEKA 462 (489)
T ss_pred ceeeeccccc-hHHHHHhhhhhhhccc
Confidence 9998887433 3678888888776554
No 11
>PLN02677 mevalonate kinase
Probab=100.00 E-value=6.3e-41 Score=378.41 Aligned_cols=340 Identities=20% Similarity=0.310 Sum_probs=225.6
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 497 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
+.++|||||+|+|||+||+|++++++||++++++.+++++..+- .+.+.+. +++-...
T Consensus 3 i~v~apgk~~l~Geh~~~~g~~a~~~ai~~~~~~~~~~~~~~~~-----------------~~~i~~~-----~~di~~~ 60 (387)
T PLN02677 3 VKARAPGKIILAGEHAVVHGSTAVAAAIDLYTYVSLRFPPSAEN-----------------DDTLKLQ-----LKDLGLE 60 (387)
T ss_pred eEEeCCccEEEeeeeeeecCCeeeeeEeeceEEEEEEecCCCCC-----------------CCeEEEE-----cCCCCce
Confidence 57899999999999999999999999999999999998642110 0112211 1111112
Q ss_pred eeccCCccccC---------CCCcchhh-----hhcccCC--CCC-CchH-HHHHHHHHHHHHHhCCCCCCCEEEEEEeC
Q 001947 577 FDMDLSDFMDE---------GKPMSYEK-----AKKYFDT--NPS-QKWA-AYVAGTILVLMTELGVRFEDSISMLVSSA 638 (992)
Q Consensus 577 ~~~~l~~l~~~---------~~~~~~~~-----~~~~~~~--~~~-~~w~-nyv~~~i~~~~~~~g~~~~~g~~i~i~s~ 638 (992)
++|+++++... ..+..+.. ...|... .+. ..|. +.+.+ +..+....- .. .++++.|.|+
T Consensus 61 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~~~~~~~~~-flyl~~~~~-~~-~~~~i~I~S~ 137 (387)
T PLN02677 61 FSWPLARIKEALPDLGTPCPSTPTSCSEETLKSIAALVEEQNIPEAKIWLSSGVSA-FLWLYTSIL-GF-NPATVVVTSE 137 (387)
T ss_pred EEechHhhhhhhccccccccccccccCHHHHHHHHHHHHhcCCcchhhhhhhHHHH-HHHHHHHhc-cC-CCeEEEEEcc
Confidence 44444333210 01111111 1122211 010 0111 11111 111111111 12 5799999999
Q ss_pred CCCCCCCchHHHHHHHHHHHHHHHhCC-CC-------------CHHHHHHHHHHHhccccCCCCCccchhhhhccCcceE
Q 001947 639 VPEGKGVSSSASVEVASMSAIAAAHGL-NI-------------HPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKL 704 (992)
Q Consensus 639 iP~g~GLgSSAA~~va~~~al~~~~~~-~l-------------~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~ 704 (992)
||+|+|||||||++||++.|++.+++. ++ +.+++.++|+.+|+.+||+|||+ |++++++|| +
T Consensus 138 lP~GaGLGSSAAv~Va~~~AL~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~A~~~E~~~hG~pSGi-D~a~s~~Gg---~ 213 (387)
T PLN02677 138 LPLGSGLGSSAAFCVALSAALLAASDSISVSTGGNGWSSLDETDLELVNKWAFEGEKIIHGKPSGI-DNTVSTYGN---M 213 (387)
T ss_pred CCCCCCccHHHHHHHHHHHHHHHHhCCcccccccccccccChhHHHHHHHHHHHHHHHHhCCCCch-hHHHHhcCC---e
Confidence 999999999999999999999999983 22 23588899999999999999996 999999999 3
Q ss_pred EEEeecCccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhh
Q 001947 705 LAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGV 784 (992)
Q Consensus 705 ~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~ 784 (992)
+.+ +.... ++++.+.+++|+|+|||++|+|+ ++|..++.
T Consensus 214 I~f--~~~~~-~~l~~~~~l~llv~dTgv~~sT~---------------~lV~~V~~----------------------- 252 (387)
T PLN02677 214 IKF--KSGEL-TRLQSNMPLKMLITNTRVGRNTK---------------ALVAGVSE----------------------- 252 (387)
T ss_pred EEE--cCCCc-eecCCCCCceEEEEECCCCCcHH---------------HHHHHHHH-----------------------
Confidence 444 44333 56666678999999999999986 35554421
Q ss_pred hHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHH
Q 001947 785 ELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALL 864 (992)
Q Consensus 785 ~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l 864 (992)
+++-.|+.++..+ +.+.+ -+.++..+|
T Consensus 253 -----------~~~~~p~~~~~il------------------------------------~~~~~------i~~~a~~al 279 (387)
T PLN02677 253 -----------RALRHPDAMKSVF------------------------------------NAVDS------ISEELATII 279 (387)
T ss_pred -----------HHHhCHHHHHHHH------------------------------------HHHHH------HHHHHHHHH
Confidence 1111122222111 01111 256777777
Q ss_pred hccCCh-----hHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEcc
Q 001947 865 TAAASD-----DQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGR 939 (992)
Q Consensus 865 ~~~~~~-----~d~~~lG~lm~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~ 939 (992)
++...+ +|++.||++|+.+|..|+.+|||+|.+|.+++++++ .| +|||+||||+|||+|+|.+
T Consensus 280 ~~~~~~~~~~~~~~~~Lg~lm~~N~~LL~~LGVS~~~le~iv~~a~~-----------~~-~~AKlTGAGgGGC~IaL~~ 347 (387)
T PLN02677 280 QSPAEDELSITEKEEKLKELMEMNQGLLQCMGVSHSSIETVLRTTLK-----------YK-LVSKLTGAGGGGCVLTLLP 347 (387)
T ss_pred hccccccccccchHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHH-----------cC-CccccccCCCCCEEEEEcc
Confidence 762111 479999999999999999999999999999999987 45 7999999999999998887
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCce
Q 001947 940 NSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGK 975 (992)
Q Consensus 940 ~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~ 975 (992)
+..+ ++.++.+.++.++ .|++ .|+. ..+|+++
T Consensus 348 ~~~~-~~~~~~l~~~l~~-~G~~--~~~~~~g~~Gv~~ 381 (387)
T PLN02677 348 TLLS-GTVVDKVIAELES-SGFQ--CFTAGIGGNGVQI 381 (387)
T ss_pred cccc-hhHHHHHHHHHHH-CCCe--EEEEEeCCCceEE
Confidence 6543 4566778888874 4764 4554 5777654
No 12
>TIGR00549 mevalon_kin mevalonate kinase. Paracoccus exhibits two genes within the phosphomevalonate/mevalonate kinase family, one of which falls between trusted and noise cutoffs of this model. The degree of divergence is high, but if the trees created from this model are correct, the proper names of these genes have been swapped.
Probab=100.00 E-value=2.9e-41 Score=371.57 Aligned_cols=273 Identities=26% Similarity=0.324 Sum_probs=209.2
Q ss_pred cCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCceecc
Q 001947 501 APGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMD 580 (992)
Q Consensus 501 APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~ 580 (992)
|||||+|||||+||+|++||++|||+++++.+++++++ ++ +.+.. ++.+
T Consensus 1 aPgkv~L~GEH~v~~g~~al~~aI~~~~~~~~~~~~~~-~~---------------------i~~~~---------~~~~ 49 (273)
T TIGR00549 1 APGKIILFGEHAVVYGEPAIAAPIPLRTTVTVIESSDG-SF---------------------IESDL---------GRGS 49 (273)
T ss_pred CCceEEEEecChhccCCCeeEEEecccEEEEEEEcCCC-ce---------------------Eeccc---------cCCc
Confidence 79999999999999999999999999999999988764 21 11110 1001
Q ss_pred CCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHH
Q 001947 581 LSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIA 660 (992)
Q Consensus 581 l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~ 660 (992)
...+ ......|.+|+++++..+. ..+ . .++++.++|+||.++|||||||++||++.|++
T Consensus 50 ~~~~-----------------~~~~~~~~~~v~~~l~~~~-~~~--~-~~~~i~i~s~iP~g~GLGSSaa~~va~~~al~ 108 (273)
T TIGR00549 50 LDDA-----------------PQELDGLVSYIAEALSYFS-ELN--P-PPLEIEIDSEIPPGRGLGSSAAVAVALIRALA 108 (273)
T ss_pred HhHh-----------------hHHHHHHHHHHHHHHHHhh-ccC--C-CCEEEEEecCCCCCCCccHHHHHHHHHHHHHH
Confidence 1000 1223579999999888653 222 1 35999999999999999999999999999999
Q ss_pred HHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCccccCCC
Q 001947 661 AAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGA 740 (992)
Q Consensus 661 ~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~ 740 (992)
.+++.++++++++++|+.+|+.++|.||| +||+++++||. +++++.... ..+..+.++.++++|||++++|..
T Consensus 109 ~~~~~~~~~~~l~~~a~~~E~~~~G~~sG-~D~~~~~~Gg~---~~~~~~~~~--~~~~~~~~~~lvl~~tg~~~~T~~- 181 (273)
T TIGR00549 109 DYFGSELSKEELAKLANEAEKIAHGKPSG-IDTATSTYGGP---VYFEKGEGE--FTKLISLDGYFVIADTGVSGSTKE- 181 (273)
T ss_pred HHhCCCCCHHHHHHHHHHHHHHhCCCCch-HhHHHHhcCCe---EEEEcCCCc--eeeccCCCeEEEEEECCCCCcHHH-
Confidence 99999999999999999999999999999 59999999994 556654322 234445568999999999988752
Q ss_pred CCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhh
Q 001947 741 DYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEE 820 (992)
Q Consensus 741 ~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~ 820 (992)
+++.+ ..+++..++.++..+
T Consensus 182 --------------~~~~v----------------------------------~~~~~~~~~~~~~~~------------ 201 (273)
T TIGR00549 182 --------------AVARV----------------------------------RQLLERFPELIDSIM------------ 201 (273)
T ss_pred --------------HHHHH----------------------------------HHHHHhCHHHHHHHH------------
Confidence 11111 001111111111100
Q ss_pred hhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCchHHHH
Q 001947 821 FSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRL 900 (992)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~lD~l 900 (992)
+++ ..++.+++.+|+++ |++.||++|+++|..++++++++|++|+|
T Consensus 202 ------------------------~~~------~~~~~~~~~al~~~----d~~~lg~l~~~~~~~l~~~~vs~p~l~~l 247 (273)
T TIGR00549 202 ------------------------DAI------GELTLEAKAALQDG----DVESLGELMNINQGLLKALGVSHPKLDQL 247 (273)
T ss_pred ------------------------HHH------HHHHHHHHHHHHhC----CHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 011 13678889999886 99999999999999999999999999999
Q ss_pred HHHHHHHhhhccccCCCCCcccceeeccccCceEEEE
Q 001947 901 VQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVI 937 (992)
Q Consensus 901 v~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l 937 (992)
++.+++ .|++|+||||||+|||+++|
T Consensus 248 ~~~~~~-----------~Ga~gaklsGaG~GG~~i~l 273 (273)
T TIGR00549 248 VETARK-----------AGALGAKLTGAGGGGCMIAL 273 (273)
T ss_pred HHHHHH-----------CCCceeeeccCCCCceEEeC
Confidence 999987 68999999999999999875
No 13
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents the low GC Gram-positive organism forms of the ERG8 type of phosphomevalonate kinase.
Probab=100.00 E-value=8e-39 Score=362.62 Aligned_cols=314 Identities=19% Similarity=0.216 Sum_probs=228.6
Q ss_pred EEEcCccccccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 498 VARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 498 ~~~APGRv~L~GeH~dy~-gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
.++|||||+|||||+||+ |.+||++||++++++.++++++..++ |.|.. +... .
T Consensus 2 ~~~APGKl~L~GEhavv~~G~pAl~~aI~~~~~v~i~~~~~~~~~---------------------i~s~~--~~~~--~ 56 (358)
T TIGR01220 2 VVHAPGKLFVAGEYAVVEPGNPAILVAVDRFVTVTVEDADGAADV---------------------IISSD--LGPQ--P 56 (358)
T ss_pred eeecceeEEEeeeEEEecCCCeEEEEEEcCcEEEEEEeCCCCceE---------------------EEecC--CCCC--c
Confidence 578999999999999999 77899999999999999999875433 32221 1111 1
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHH---HhCCCCCCCEEEEEEeCCCCC----CCCchHH
Q 001947 577 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMT---ELGVRFEDSISMLVSSAVPEG----KGVSSSA 649 (992)
Q Consensus 577 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~---~~g~~~~~g~~i~i~s~iP~g----~GLgSSA 649 (992)
+++..+.. ++.. .......|.+|+++++..+.+ ..+... +|+++.|.|+||++ +||||||
T Consensus 57 ~~~~~~~~-----~~~~-------~~~~~~~~~~~v~~~i~~~~~~~~~~~~~~-~g~~~~i~s~ip~~~g~k~GLGSSA 123 (358)
T TIGR01220 57 VGWRRHDG-----RLVV-------RDPDARSALAYVVSAIETVERYAGERNQKL-PALHLSVSSRLDEADGRKYGLGSSG 123 (358)
T ss_pred eEEEecCC-----ceee-------cccccccchHHHHHHHHHHHHHHHhcCCCC-CceEEEEecCCCCcCCCCCCccHHH
Confidence 22221110 0000 001134799999999876533 335554 69999999999994 6999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEe-ec------------------
Q 001947 650 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV-CQ------------------ 710 (992)
Q Consensus 650 A~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~-~~------------------ 710 (992)
|++||++.|++.+++.++++++++++|+.+|+.+||.++| .|+++++|||. +.+. +.
T Consensus 124 A~~Va~~~Al~~~~~~~l~~~~l~~lA~~~E~~~~g~~sg-~D~~a~~~GG~---i~~~~~~~~~~~~~~~~~~~~~~~~ 199 (358)
T TIGR01220 124 AVTVATVKALNAFYDLELSNDEIFKLAMLATAELQPKGSC-GDIAASTYGGW---IAYSTFDHDWVLQLARRVGVDRTLK 199 (358)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhhhCCCCCc-chhhhhhhCCE---EEEecCCHHHHhhhhhccchhhhhc
Confidence 9999999999999999999999999999999999999888 59999999994 3332 11
Q ss_pred ----CccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhH
Q 001947 711 ----PAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVEL 786 (992)
Q Consensus 711 ----~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~ 786 (992)
+..+ +++++|.+++|+++|||++++|. ++++.+..
T Consensus 200 ~~w~~~~~-~~l~~~~~~~l~v~~tg~~~~T~---------------~~v~~V~~------------------------- 238 (358)
T TIGR01220 200 APWPGLSI-RPLPAPKGLTLLIGWTGSPASTA---------------SLVSDVHR------------------------- 238 (358)
T ss_pred cCCCccce-eECCCCCCCEEEEEeCCCCcCcH---------------HHHHHHHH-------------------------
Confidence 1112 56677778999999999999875 23433310
Q ss_pred HHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhc
Q 001947 787 LEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTA 866 (992)
Q Consensus 787 l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~ 866 (992)
.+.-.++.++.. ++ ++. .-+.+++++|+.
T Consensus 239 ---------~~~~~~~~~~~~--------------l~----------------------~~~------~i~~~~~~al~~ 267 (358)
T TIGR01220 239 ---------RKWRGSASYQRF--------------LE----------------------TST------DCVESAITAFET 267 (358)
T ss_pred ---------HhhcChHHHHHH--------------HH----------------------HHH------HHHHHHHHHHHh
Confidence 000011111110 00 111 125678889988
Q ss_pred cCChhHHHHHHHHHHHhhhhhhhc------CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccC
Q 001947 867 AASDDQLTSLGELLYQCHYSYSAC------GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRN 940 (992)
Q Consensus 867 ~~~~~d~~~lG~lm~~sH~slr~~------~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~ 940 (992)
+ |++.||++|+++|..|+.+ +||+|++|+|++.+++ .|+ |||+||||+|||++++.++
T Consensus 268 ~----d~~~lg~~~~~~~~lL~~l~~~~~~~vs~~~l~~li~~a~~-----------~ga-~aKlsGAGgGg~~ial~~~ 331 (358)
T TIGR01220 268 G----DITSLQKEIRRNRQELARLDDEVGVGIETEKLKALCDAAEA-----------YGG-AAKPSGAGGGDCGIAILDA 331 (358)
T ss_pred C----CHHHHHHHHHHHHHHHHHhhcccCCCcCCHHHHHHHHHHhh-----------cCc-eecCCCCCCcCEEEEEeCC
Confidence 6 9999999999999999987 9999999999999987 676 9999999999999988875
Q ss_pred CcccHHHHHHHHHHHHhhcCCCCeEE
Q 001947 941 SLRSSEQVLEIQQRYKDATGYLPLII 966 (992)
Q Consensus 941 ~~~~~~~~~~i~~~y~~~~g~~~~~~ 966 (992)
.. ..+.+.++.+ +.|+.|.-.
T Consensus 332 ~~----~~~~~~~~~~-~~G~~~l~~ 352 (358)
T TIGR01220 332 EA----DITHVRQRWE-TAGILPLPL 352 (358)
T ss_pred ch----hHHHHHHHHH-HCCCeEeee
Confidence 44 3456666665 668777543
No 14
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism]
Probab=100.00 E-value=2.5e-39 Score=351.32 Aligned_cols=292 Identities=26% Similarity=0.352 Sum_probs=218.8
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 001947 498 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 577 (992)
Q Consensus 498 ~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 577 (992)
.++||||++|||||++++|.++|.+||+.++++.++.+++.++.+ .+.. +
T Consensus 2 ~~~aPgKliL~GEHAVVyG~pAI~~aI~~~~~v~~~~s~~~~~~i---------------------~~~~--~------- 51 (307)
T COG1577 2 SVSAPGKLILFGEHAVVYGYPAIAAAIDLRVTVTISESDSNKIVI---------------------ESSD--L------- 51 (307)
T ss_pred cccccccEEEEecceeeeCCchhheeeeeeEEEEEEecCCCcEEE---------------------eccC--C-------
Confidence 478999999999999999999999999999999999998754322 2110 0
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 001947 578 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 657 (992)
Q Consensus 578 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 657 (992)
..+.+ .. +.. ..|+..++..+....++....+|++.|.|+||+++|||||||+.||++.
T Consensus 52 --~~~~~-------~~---------~~~---~~~~~~~v~~~~e~~~~~~~~~~~l~I~S~iP~g~GLGSSAAVsva~i~ 110 (307)
T COG1577 52 --KSSTL-------ER---------DED---EGYIQAAVRLASELLNQSSLKPFSLEIDSEIPIGAGLGSSAAVSVAVIK 110 (307)
T ss_pred --CCccc-------cc---------ccc---chHHHHHHHHHHHHhcccCCCCeEEEEecCCCCCCCccHHHHHHHHHHH
Confidence 10000 00 000 1566666665443333222379999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCcccc
Q 001947 658 AIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 737 (992)
Q Consensus 658 al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~ 737 (992)
|++.+||.+++++++++++.++|..+||.||| +|.+++++|| .+++... ... +.+.++..-.|++.|+|.+.+|
T Consensus 111 al~~~~g~~ls~~~l~~la~~~e~~vqG~~Sg-~D~a~~~~gg---~v~~~~~-~~~-~~l~~~~~~~~~I~~tg~~~sT 184 (307)
T COG1577 111 ALSAYFGVELSPEELAKLANKVELIVQGKASG-IDIATITYGG---LVAFKKG-FDF-EKLEIELLGTLVIGDTGVPGST 184 (307)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHcCCCCc-ccceEEEeCC---EEEEecC-CCc-cccccccCCeEEEEEcCCcCcH
Confidence 99999999999999999999999999999999 6999999999 5666532 122 4555553338999999999988
Q ss_pred CCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccch
Q 001947 738 GGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIV 817 (992)
Q Consensus 738 ~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~ 817 (992)
. +++..++ .|++ ..|+.+
T Consensus 185 ~---------------e~V~~V~----------------------------------~l~~------------~~~~~~- 202 (307)
T COG1577 185 K---------------ELVAGVA----------------------------------KLLE------------EEPEVI- 202 (307)
T ss_pred H---------------HHHHHHH----------------------------------HHHH------------hhhHHH-
Confidence 5 2443331 1111 111111
Q ss_pred hhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCchH
Q 001947 818 GEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGT 897 (992)
Q Consensus 818 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~l 897 (992)
....+.+. .-++++..+++.+ |.+.||++|+.+|..|..+|||+|++
T Consensus 203 ---------------------------~~~~~~ig--~~~~~a~~al~~~----d~e~lgelm~~nq~LL~~LgVs~~~L 249 (307)
T COG1577 203 ---------------------------DPILDAIG--ELVQEAEAALQTG----DFEELGELMNINQGLLKALGVSTPEL 249 (307)
T ss_pred ---------------------------HHHHHHHH--HHHHHHHHHHhcc----cHHHHHHHHHHHHHHHHhcCcCcHHH
Confidence 01112222 2367888888886 99999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHH
Q 001947 898 DRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYK 956 (992)
Q Consensus 898 D~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~ 956 (992)
|+||+.+++ .|++|||+||||+|||+|+|.++.. ..+.+..+.+
T Consensus 250 ~~lv~~a~~-----------~Ga~gaKlTGAGgGGc~IaL~~~~~----~~~~l~~~~~ 293 (307)
T COG1577 250 DELVEAARS-----------LGALGAKLTGAGGGGCIIALAKNEE----IAETLSNRLE 293 (307)
T ss_pred HHHHHHHHh-----------cCccccccccCCCCceEEEEeccch----HHHHHHHHHH
Confidence 999999998 6899999999999999999987622 2455655554
No 15
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=334.40 Aligned_cols=340 Identities=21% Similarity=0.278 Sum_probs=225.0
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 497 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
..++|||||+|+|||+++||.++++++|++++|+.+++..++++.+.. |++.+ +
T Consensus 5 l~vsaPGKvILfGEHAVVyg~~AlAaai~LrTyl~l~~san~~i~l~l--------------~di~~------------~ 58 (397)
T KOG1511|consen 5 LLVSAPGKVILFGEHAVVYGRTALAAAIDLRTYLRLQTSANDRILLQL--------------PDISI------------E 58 (397)
T ss_pred eeecCCccEEEeccceeEECCceeEEEeecceeEEEEecCCCeEEEec--------------ccCCc------------e
Confidence 478999999999999999999999999999999999988766543321 22222 2
Q ss_pred eeccCCcccc----C-------CCCc---chhhhhc---ccCCCCCCchHHHHHHHHHHHHHHhCCCC---CCCEEEEEE
Q 001947 577 FDMDLSDFMD----E-------GKPM---SYEKAKK---YFDTNPSQKWAAYVAGTILVLMTELGVRF---EDSISMLVS 636 (992)
Q Consensus 577 ~~~~l~~l~~----~-------~~~~---~~~~~~~---~~~~~~~~~w~nyv~~~i~~~~~~~g~~~---~~g~~i~i~ 636 (992)
+.|++.+|.. . ..|. ..+..+. .+.......-.--+.+. .+++--.-.+. .+.+.+.|.
T Consensus 59 ~~w~l~~~~~~l~~~~~~~~~~q~p~~~~~~e~~k~l~~l~~~~~~~~~~~a~~~~-lYlf~~l~~~~~g~lp~~~v~v~ 137 (397)
T KOG1511|consen 59 KAWSLADFNGALPEQRSTYESVQTPASEVRVELLKQLGGLLENQEKVKEHLAGLSF-LYLFLGLCLRAPGTLPALTVVVD 137 (397)
T ss_pred EEEEhhhhhhhhhhhhhhhhccCCcchhhhHHHHHHhhhhhhcchhhhHHHHHHHH-HHHHHHhhhcccCCCcceEEEEe
Confidence 4455544210 0 0111 0111111 11111111101111111 11111111111 133899999
Q ss_pred eCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCH-----------HHHHHHHHHHhccccCCCCCccchhhhhccCcceEE
Q 001947 637 SAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-----------RDLALLCQKVENHIVGAPCGVMDQMASACGEANKLL 705 (992)
Q Consensus 637 s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~-----------~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~ 705 (992)
|++|+|+|||||||+.||++++++.++|.--++ +-+.+||+..|+.+||+|||+ |+++|+|||. +
T Consensus 138 SelP~GaGLGSSAa~sv~lAtall~~~g~i~~p~~~~~~~e~~l~Li~~WAf~gE~~iHGtpSGi-DnaV~t~Gg~---i 213 (397)
T KOG1511|consen 138 SELPLGAGLGSSAAISVALATALLRLAGLIPPPGSNLSLAENDLALINKWAFEGEKCIHGTPSGI-DNAVCTYGGL---I 213 (397)
T ss_pred ccCCCcCCcchhHHHHHHHHHHHHHHcccCCCCcchhccccchHHHHHHHHhccceeecCCCccc-chhhhccCce---E
Confidence 999999999999999999999999998873222 456789999999999999995 9999999994 4
Q ss_pred EEeecCccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhh
Q 001947 706 AMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVE 785 (992)
Q Consensus 706 ~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~ 785 (992)
.+ ++..++ +.+...+.++++++||.++|+|+. +|+.+
T Consensus 214 ~f-~kg~~~-~~Lk~~~~L~illtnTrv~RnTk~---------------lVa~V-------------------------- 250 (397)
T KOG1511|consen 214 SF-KKGVEI-ESLKHLPPLRILLTNTRVPRNTKA---------------LVAGV-------------------------- 250 (397)
T ss_pred Ee-ecCccc-eecccCCCceEEEEccccCccHHH---------------HHHHH--------------------------
Confidence 43 233244 566655689999999999999862 44332
Q ss_pred HHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHh
Q 001947 786 LLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLT 865 (992)
Q Consensus 786 ~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~ 865 (992)
..+.+.-|+.+++++ ..|.|. ..++..++.
T Consensus 251 --------r~~~~kfPevi~~i~----------------------------------------~aid~i--s~ea~~il~ 280 (397)
T KOG1511|consen 251 --------RELLEKFPEVIKAIF----------------------------------------DAIDEI--SLEAVWILQ 280 (397)
T ss_pred --------HHHHHhhhHHHHHHH----------------------------------------HHHHHH--HHHHHHHHh
Confidence 111111122222211 122222 345666665
Q ss_pred ccCChhHH--H-HHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCc
Q 001947 866 AAASDDQL--T-SLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSL 942 (992)
Q Consensus 866 ~~~~~~d~--~-~lG~lm~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~ 942 (992)
+.+.+... + +|.+||..||..|..+|||+|.+|.++..+++ -| +.+||||||+|||++.|.+.+.
T Consensus 281 ~e~~~~~~~~Eq~L~eLi~iNq~LL~alGVsH~~le~v~~~t~k-----------~g-i~sKLTGAGgGGc~itlL~~~~ 348 (397)
T KOG1511|consen 281 RENDEFSSPKEQKLEELIRINQDLLDALGVSHPSLELVCTTTRK-----------LG-IHSKLTGAGGGGCVITLLKPGT 348 (397)
T ss_pred cccccCCCcHHHHHHHHHHHhHHHHHHhCCCcHHHHHHHHHHHH-----------hC-cceecccCCCCceEEEEECCCC
Confidence 42111111 2 59999999999999999999999999999988 47 7899999999999997766556
Q ss_pred ccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCcee
Q 001947 943 RSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGKF 976 (992)
Q Consensus 943 ~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~~ 976 (992)
+ ++++..++++.... |+ ++|+. -.||+.+.
T Consensus 349 ~-qe~i~~~ke~L~s~-gf--~v~~t~lGG~G~~v~ 380 (397)
T KOG1511|consen 349 E-QEQIDKWKEELESH-GF--EVFETELGGPGVSVH 380 (397)
T ss_pred c-hHHHHHHHHHHHhc-Cc--ceeeccCCCCceEEE
Confidence 5 68899999998855 76 47765 47776553
No 16
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional
Probab=100.00 E-value=4.8e-38 Score=381.62 Aligned_cols=306 Identities=16% Similarity=0.233 Sum_probs=217.0
Q ss_pred ceEEEEcCccccccccccc------cCCCeeeccccccc----eEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEE
Q 001947 495 EIFVARAPGRLDVMGGIAD------YSGSLVLQMPIREA----CHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIV 564 (992)
Q Consensus 495 ~~~~~~APGRv~L~GeH~d------y~gg~vl~~aI~~~----~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~ 564 (992)
.+.+++|||||||+||||| |+||.|+|+||+++ +++.+++++|.++++.+.+
T Consensus 608 ~~~~~~aPgRVnLiGghTDtPpy~~ynGG~VLn~AId~~g~~pi~v~v~~~~d~~irl~S~d------------------ 669 (974)
T PRK13412 608 QIVWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLAIELNGQPPLQVYVKPCSEPHIVLRSID------------------ 669 (974)
T ss_pred cEEEEeCceEEeecccCcCCCcccCcCCcEEEEEEEeCCCCccEEEEEEECCCCeEEEEECC------------------
Confidence 3455699999999999999 99999999999997 9999999988766554321
Q ss_pred ecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHH-------------HHHHhCCCCCCCE
Q 001947 565 SYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-------------LMTELGVRFEDSI 631 (992)
Q Consensus 565 s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~-------------~~~~~g~~~~~g~ 631 (992)
+... ..++ ..+++. ......+|.+|+++++.. .+++....+..|+
T Consensus 670 -----~~~~-~~v~-~~~~l~---------------~~~~~~~~~~~~K~al~~~G~~~~~~~~~~~~l~e~l~~~G~G~ 727 (974)
T PRK13412 670 -----LGAM-EVVR-TNEELR---------------DYKKVGSPFSIPKAALCLAGFAPRFSAESYASLEEQLKAFGSGI 727 (974)
T ss_pred -----CCCc-eEEe-cchhhc---------------ccccccchHhhhhhhheecccccccccchhHHHHHHHHhcCCCe
Confidence 1110 0111 111110 012346799999988741 1211111122599
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecC
Q 001947 632 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQP 711 (992)
Q Consensus 632 ~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~ 711 (992)
+|+|.|+||+|+|||||||++||++.|++.+++.++++++++++|+.+|+..+|.+++ +||+++++||. +++++.+
T Consensus 728 ~I~i~s~IP~GsGLGSSAAlavA~l~AL~~~~g~~ls~~ela~~A~~~E~~lhg~~g~-qDq~~a~~GG~---~~i~~~~ 803 (974)
T PRK13412 728 EITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNEICNRTLVLEQLLTTGGGW-QDQYGGVLPGV---KLLQTGA 803 (974)
T ss_pred EEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHCCCCch-hhhhhHhcCCe---EEEEecC
Confidence 9999999999999999999999999999999999999999999999999887776655 99999999994 5566543
Q ss_pred c-c-c--eeeecCCC------CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcch
Q 001947 712 A-E-L--LGVVEIPS------HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEV 781 (992)
Q Consensus 712 ~-~-~--~~~v~~p~------~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~ 781 (992)
. . . .++++.+. +-+++|+|||++|+++. +++.+..++
T Consensus 804 ~~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T~~---------------iV~~Vv~~~------------------ 850 (974)
T PRK13412 804 GFAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTAKG---------------ILAEIVRSM------------------ 850 (974)
T ss_pred CcccCcceeecCcchhhhhhccCcEEEEECCCeeeHHH---------------HHHHHHHHH------------------
Confidence 1 1 0 12233221 24699999999988752 333321110
Q ss_pred hhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHH
Q 001947 782 DGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFK 861 (992)
Q Consensus 782 ~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~ 861 (992)
+.+ ++.+.. ..+-+.+ -+.+++
T Consensus 851 --------------~~~--~~~~~~----------------------------------------~l~~ig~--La~ea~ 872 (974)
T PRK13412 851 --------------FLN--STAHLQ----------------------------------------LLHEMKA--HALDMY 872 (974)
T ss_pred --------------HhC--cHHHHH----------------------------------------HHHHHHH--HHHHHH
Confidence 000 001100 0011111 156788
Q ss_pred HHHhccCChhHHHHHHHHHHHhhhhhhhc--CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEcc
Q 001947 862 ALLTAAASDDQLTSLGELLYQCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGR 939 (992)
Q Consensus 862 ~~l~~~~~~~d~~~lG~lm~~sH~slr~~--~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~ 939 (992)
.+|+++ |++.||+||+++|..++.+ |||+|++|+|++.|++ +++|+||||||+|||++++.+
T Consensus 873 ~ALe~g----D~~~LG~LMn~~w~ll~~L~~GVSnp~LD~Li~~A~~------------gAlGaKLTGAGGGGcvI~Lak 936 (974)
T PRK13412 873 EAIQRG----EFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKD------------YTLGYKLPGAGGGGYLYMVAK 936 (974)
T ss_pred HHHHcC----CHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHc------------CCcEEEecccCcccEEEEEEC
Confidence 999986 9999999999999999998 9999999999999964 689999999999999998886
Q ss_pred CCcccHHHHHHH
Q 001947 940 NSLRSSEQVLEI 951 (992)
Q Consensus 940 ~~~~~~~~~~~i 951 (992)
+...++++.+++
T Consensus 937 ~~~~a~~I~~~L 948 (974)
T PRK13412 937 DPGAAERIRKIL 948 (974)
T ss_pred ChhhHHHHHHHH
Confidence 544333334333
No 17
>PTZ00298 mevalonate kinase; Provisional
Probab=100.00 E-value=3.2e-36 Score=338.57 Aligned_cols=303 Identities=18% Similarity=0.215 Sum_probs=222.2
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecC-cchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 498 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKIS-PSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 498 ~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
...|||||+|||||+|+||.++|..+|+++..+.+...+ ++. +.+.+
T Consensus 12 ~~~~~~kvil~GEHaVvyg~~aI~~~I~~~d~~~i~~~~~~~~---------------------~~~~~----------- 59 (328)
T PTZ00298 12 KHIGYGKVILFGEHFVVYGAEAIVAGIDEYTECRLELTKGVPG---------------------LQVVD----------- 59 (328)
T ss_pred CCCcCeeEEEEecceeecCCchhhhecccceEEEEEEccCCCC---------------------ceecc-----------
Confidence 568999999999999999999999999998666666443 111 11110
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCC-CCCEEEEEEeCCCCCCCCchHHHHHHHH
Q 001947 577 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRF-EDSISMLVSSAVPEGKGVSSSASVEVAS 655 (992)
Q Consensus 577 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~-~~g~~i~i~s~iP~g~GLgSSAA~~va~ 655 (992)
+...+ | .....-.|.++.++..+.+..+... ..|++|.|.++||+++|||||||++||+
T Consensus 60 ---~~~~~-----~------------~~~~~~~n~~~~a~~~~~~~~~~~~~~~g~~I~I~~~IP~gaGLGSSsA~avA~ 119 (328)
T PTZ00298 60 ---QRPAV-----P------------GYIVEKREEQRKAHQLVLRHLNIDTSVDGLKMHLGGPLVPSSGIGASASDVVSL 119 (328)
T ss_pred ---ccccc-----c------------chHHHhHHHHHHHHHHHHHHHhcccCCCCeEEEEECCCCCCCCchHHHHHHHHH
Confidence 00000 0 0001126677777777777777542 1499999999999999999999999999
Q ss_pred HHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCc-cceeeecCCCCeEEEEEeCCCc
Q 001947 656 MSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPA-ELLGVVEIPSHIRFWGIDSGIR 734 (992)
Q Consensus 656 ~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~-~~~~~v~~p~~~~~vl~dsgi~ 734 (992)
+.|++.+++.++++++|+++|+.+|+.++|.|+| +|+.++++||. +++..... ....+++++.++.+++++++++
T Consensus 120 l~al~~l~~~~ls~~el~~~a~~~E~~~~g~~sG-~D~~~~~~Gg~---~~~~~~~g~~~~~~l~~~~~~~lvv~~~~~~ 195 (328)
T PTZ00298 120 SRALSELYQLNLTEEEVNLSAFVGEGGYHGTPSG-ADNTAATYGGL---ISYRRVNGKSVFKRIAFQQPLYLVVCSTGIT 195 (328)
T ss_pred HHHHHHHhCCCCCHHHHHHHHHHHHHHhcCCCCh-HHHHHHHcCCe---EEEecCCCccceeEecCCCCCeEEEEECCCc
Confidence 9999999999999999999999999999999999 59999999994 44443221 1224566667889999999998
Q ss_pred cccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCc
Q 001947 735 HSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPE 814 (992)
Q Consensus 735 ~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~ 814 (992)
++|.. +++.+ ..+++..|+.++.
T Consensus 196 ~sT~~---------------~~~~v----------------------------------~~~~~~~p~~~~~-------- 218 (328)
T PTZ00298 196 ASTTK---------------VVGDV----------------------------------RKLKENQPTWFNR-------- 218 (328)
T ss_pred hhHHH---------------HHHHH----------------------------------HHHHhcCHHHHHH--------
Confidence 88742 11111 0111112222111
Q ss_pred cchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCC
Q 001947 815 SIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGS 894 (992)
Q Consensus 815 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~ 894 (992)
+.+++.| ++.++..+|.++ |++.||++|+++|.+|+++++++
T Consensus 219 ----------------------------~~~~~~~------~~~~~~~al~~~----d~~~lg~~m~~~~~~l~~~~v~~ 260 (328)
T PTZ00298 219 ----------------------------LLENYNA------CVSEAKEALQKG----NLFRVGELMNANHDLCQKLTVSC 260 (328)
T ss_pred ----------------------------HHHHHHH------HHHHHHHHHHcC----CHHHHHHHHHHHHHHHHHhCCCc
Confidence 1112333 356778888886 99999999999999999999999
Q ss_pred chHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCC
Q 001947 895 DGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLP 963 (992)
Q Consensus 895 ~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~ 963 (992)
|++|++++.+++ .|++|+||||+|+|||++++.++..+++++.+.+++.|... ++.|
T Consensus 261 p~l~~l~~~~~~-----------~Ga~gaklSGsG~GG~v~al~~~~~~a~~~~~~l~~~~~~~-~~~w 317 (328)
T PTZ00298 261 RELDSIVQTCRT-----------YGALGAKMSGTGRGGLVVALAASEDQRDAIAKAVRARCPEA-KFVW 317 (328)
T ss_pred HHHHHHHHHHHh-----------CCCceeEeccCCCCeEEEEEecchhhHHHHHHHHHHHhhhc-CCeE
Confidence 999999999987 68999999999999999988765333456778888777633 4443
No 18
>PRK03926 mevalonate kinase; Provisional
Probab=100.00 E-value=6.1e-35 Score=325.83 Aligned_cols=295 Identities=23% Similarity=0.286 Sum_probs=216.9
Q ss_pred EEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCc
Q 001947 497 FVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPT 576 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~ 576 (992)
+.++|||||+|+|||+||+||.+|.+||++++++.+.++++. +.+.+.
T Consensus 2 ~~~~aPgkv~L~Geh~~~~g~~~l~~aI~~~~~v~i~~~~~~----------------------~~i~~~---------- 49 (302)
T PRK03926 2 VLCSAPGKIYLFGEHAVVYGKPAIACAIDLRTYVRAEFNDDS----------------------IYIESD---------- 49 (302)
T ss_pred eEEeeeeEEEEEecceeecCCeEEEEEecceEEEEEEECCCc----------------------eEEecc----------
Confidence 578999999999999999999999999999999999877532 111100
Q ss_pred eeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHH
Q 001947 577 FDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASM 656 (992)
Q Consensus 577 ~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~ 656 (992)
+ . ....|.+++..++..+.+..+ . +|++++|.++||.++|||||||+++|++
T Consensus 50 ~----~---------------------~~~~~~~~~~~~~~~~~~~~~--~-~g~~i~i~~~iP~~~GLGSSsA~~~a~~ 101 (302)
T PRK03926 50 Y----G---------------------KTGEKHPYVSAAIEKMREEAD--K-DGVTVSITSQIPVGSGLGSSAAVTVATI 101 (302)
T ss_pred c----c---------------------cccchhHHHHHHHHHHHHhcC--C-CCeEEEEecCCCCCCCccHHHHHHHHHH
Confidence 0 0 012577788888877655444 3 5999999999999999999999999999
Q ss_pred HHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCccc
Q 001947 657 SAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHS 736 (992)
Q Consensus 657 ~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~ 736 (992)
.|++.+++.++++++++++|+.+|+.++|.++| +|++++++||. +++... .++++ +++.+++++++.+++
T Consensus 102 ~al~~~~~~~l~~~~l~~la~~~E~~~~G~~sg-~D~~~~~~Gg~---~~~~~~-----~~l~~-~~~~~vl~~~~~~~s 171 (302)
T PRK03926 102 GALNRLLGLGLSLEEIAKLGHKVELLVQGAASP-TDTYVSTMGGF---VTIPDR-----KKLPF-PECGIVVGYTGSSGS 171 (302)
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHHHcCCCch-HHHHHHhcCCe---EEEcCC-----CcCCC-CCceEEEEECCCCCc
Confidence 999999999999999999999999999999999 59999999994 333221 13343 378899999999887
Q ss_pred cCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccc
Q 001947 737 VGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESI 816 (992)
Q Consensus 737 ~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i 816 (992)
|.. ++..+ +.+++..++.+...
T Consensus 172 T~~---------------~~~~~----------------------------------~~~~~~~~~~~~~~--------- 193 (302)
T PRK03926 172 TKE---------------LVANV----------------------------------RKLKEEYPELIEPI--------- 193 (302)
T ss_pred HHH---------------HHHHH----------------------------------HHHHHhCHHHHHHH---------
Confidence 642 11110 11111112111110
Q ss_pred hhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCch
Q 001947 817 VGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDG 896 (992)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~ 896 (992)
.+.+.+ -+..+..+++++ |++.||++|+.+|..++.+++++|+
T Consensus 194 -------------------------------~~~~~~--~~~~~~~al~~~----d~~~l~~~~~~~~~~~~~~~~~~p~ 236 (302)
T PRK03926 194 -------------------------------LSSIGK--ISEKGEELILSG----DYVSLGELMNINQGLLDALGVSTKE 236 (302)
T ss_pred -------------------------------HHHHHH--HHHHHHHHHhcC----CHHHHHHHHHHHHHHHHhcCCCCHH
Confidence 001111 133556777775 9999999999999877778999999
Q ss_pred HHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCc
Q 001947 897 TDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAG 974 (992)
Q Consensus 897 lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~ 974 (992)
+|++++.+++ .|++|+||||+|+|||++++.+++. .+++++++.+. + ..++.. ...|+.
T Consensus 237 l~~l~~~~~~-----------~ga~ga~lSGaG~Gg~v~~l~~~~~-~~~~~~~~~~~-----~--~~~~~~~~~~~G~~ 297 (302)
T PRK03926 237 LSELIYAART-----------AGALGAKITGAGGGGCMVALAAPEK-QSEVATAIKIA-----G--GKPIITKITDEGLR 297 (302)
T ss_pred HHHHHHHHHh-----------CCCceeeeccCCCCCEEEEEecccc-HHHHHHHHHhc-----C--CeEEEEecCCCeeE
Confidence 9999999987 6899999999999999998876543 34556555532 2 335554 467776
Q ss_pred e
Q 001947 975 K 975 (992)
Q Consensus 975 ~ 975 (992)
+
T Consensus 298 i 298 (302)
T PRK03926 298 I 298 (302)
T ss_pred E
Confidence 5
No 19
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=100.00 E-value=4e-32 Score=305.73 Aligned_cols=311 Identities=28% Similarity=0.448 Sum_probs=216.2
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccCCCceeeeeecccCCcccccccccChHHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 94 (992)
|||+|+++++|+||++||++||++| +||+|+|++..... ++...+ .+... .+++..... ..++..+++..
T Consensus 1 MkIl~~v~~~G~GH~~R~~~la~~L--rg~~v~~~~~~~~~~~~~~~~-----~~~~~-~~~~~~~~~-~~~~~~~~~~~ 71 (318)
T PF13528_consen 1 MKILFYVQGHGLGHASRCLALARAL--RGHEVTFITSGPAPEFLKPRF-----PVREI-PGLGPIQEN-GRLDRWKTVRN 71 (318)
T ss_pred CEEEEEeCCCCcCHHHHHHHHHHHH--ccCceEEEEcCCcHHHhcccc-----CEEEc-cCceEeccC-CccchHHHHHH
Confidence 6899999999999999999999999 58999999877532 121111 12121 222332222 24555566655
Q ss_pred HHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHH-HHh
Q 001947 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQ-IAE 173 (992)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~-l~~ 173 (992)
...+. ..+...+.++.+++++++||+||+|+++.+..+|+..|||+++++|..|...+....... ..+.....+ ...
T Consensus 72 ~~~~~-~~~~~~~~~~~~~l~~~~pDlVIsD~~~~~~~aa~~~giP~i~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 149 (318)
T PF13528_consen 72 NIRWL-ARLARRIRREIRWLREFRPDLVISDFYPLAALAARRAGIPVIVISNQYWFLHPNFWLPWD-QDFGRLIERYIDR 149 (318)
T ss_pred HHHhh-HHHHHHHHHHHHHHHhcCCCEEEEcChHHHHHHHHhcCCCEEEEEehHHcccccCCcchh-hhHHHHHHHhhhh
Confidence 54332 134456777888999999999999999999999999999999998877543211111100 111122222 222
Q ss_pred h-ccccceeeecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCChhhHHHhhCC-CCcEEE
Q 001947 174 D-YSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCL 251 (992)
Q Consensus 174 ~-y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~-~~~~~V 251 (992)
. +..++..+..++..+.+...++..+|++.+. +.++.. +.+.+.|+|++|+.+.+ .+++.+.. +++.++
T Consensus 150 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~p~~~~------~~~~~~--~~~~~~iLv~~gg~~~~-~~~~~l~~~~~~~~~ 220 (318)
T PF13528_consen 150 YHFPPADRRLALSFYPPLPPFFRVPFVGPIIRP------EIRELP--PEDEPKILVYFGGGGPG-DLIEALKALPDYQFI 220 (318)
T ss_pred ccCCcccceecCCccccccccccccccCchhcc------cccccC--CCCCCEEEEEeCCCcHH-HHHHHHHhCCCCeEE
Confidence 2 4445555555444333323334445554432 111111 24567899999988876 55554432 457777
Q ss_pred EeCCCCCC-CCCCeEEcCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 001947 252 VCGASDSQ-LPPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (992)
Q Consensus 252 v~G~~~~~-l~~nv~v~~f~-~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v 329 (992)
+.|....+ .++|+++.+|. .+++++|++||++||++|+||++|++++|+|+|++|.+.+.||..||+++++.|+|+.+
T Consensus 221 v~g~~~~~~~~~ni~~~~~~~~~~~~~m~~ad~vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~ 300 (318)
T PF13528_consen 221 VFGPNAADPRPGNIHVRPFSTPDFAELMAAADLVISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVL 300 (318)
T ss_pred EEcCCcccccCCCEEEeecChHHHHHHHHhCCEEEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEc
Confidence 77876533 57899999998 78899999999999999999999999999999999998899999999999999999999
Q ss_pred ecCCCChhhHHHHHHHH
Q 001947 330 IRRDLLTGHWKPYLERA 346 (992)
Q Consensus 330 ~~~~~~~~~l~~al~~l 346 (992)
+.++++++.+.++|+++
T Consensus 301 ~~~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 301 SQEDLTPERLAEFLERL 317 (318)
T ss_pred ccccCCHHHHHHHHhcC
Confidence 99999999999888775
No 20
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only]
Probab=99.97 E-value=1.6e-30 Score=268.99 Aligned_cols=313 Identities=22% Similarity=0.303 Sum_probs=219.3
Q ss_pred EEEEcCcccccccccccc------CCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 001947 497 FVARAPGRLDVMGGIADY------SGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 570 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy------~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 570 (992)
++.+||-|+.+.|+-||+ +||.|++++||+++|+.+.+.-|.++++. .
T Consensus 2 ii~raPLRItfgGGGTDvepy~~k~GGaVlnatIdky~y~~i~~~~d~~I~~~----------------------~---- 55 (333)
T COG2605 2 IISRAPLRITFGGGGTDVEPYCSKHGGAVLNATIDKYIYVTIEKGFDDEIRVR----------------------Y---- 55 (333)
T ss_pred cccccceEEEecCCCcCchHHHHhcCCEEEEeeeeeEEEEEEccCCCceEEEe----------------------c----
Confidence 456799999999999997 49999999999999999999987765421 1
Q ss_pred CCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHH-HHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 001947 571 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILV-LMTELGVRFEDSISMLVSSAVPEGKGVSSSA 649 (992)
Q Consensus 571 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~-~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 649 (992)
+++ + .++++ +.+ .++ ..++.++.. ++...|. +.+++...+|+|+|+|||||+
T Consensus 56 -~~~---~-~v~~~------~~~-----------~h~--~~~~~~l~r~~l~~~g~---~~~el~~~~D~P~GSGLGSSS 108 (333)
T COG2605 56 -DRT---E-FVKSY------LEN-----------EHK--PLVVESLKRDFLEFNGG---TPIELHTQSDAPPGSGLGSSS 108 (333)
T ss_pred -chH---H-hhhhh------Hhh-----------cCc--hHHHHHHHHHHHhhcCC---CceEEEEecCCCCCCCCCchH
Confidence 000 0 00111 111 011 223333332 2222221 239999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCcc-c-eeeecCCC-----
Q 001947 650 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAE-L-LGVVEIPS----- 722 (992)
Q Consensus 650 A~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~-~-~~~v~~p~----- 722 (992)
|+.||++.|+..+-|..+++.+|+++|..+|++..+.+.|.+||+++.|||+|. ++++... + ..++.+..
T Consensus 109 a~vvaLl~a~~~~kg~~~~~~~LA~eAy~IER~~l~~~gG~QDqYaaA~GGFnf---MEf~~~~~V~v~pL~i~~e~~~E 185 (333)
T COG2605 109 AFVVALLNALHAWKGESLGPYELAREAYEIEREDLKIVGGKQDQYAAAFGGFNF---MEFRGNGEVVVNPLRINRERTAE 185 (333)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhccccccccHHHHHhCCceE---EEEcCCCcEEEeecccchhHHHH
Confidence 999999999999999999999999999999999999999999999999999864 5665443 2 23444432
Q ss_pred -CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCCh
Q 001947 723 -HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSP 801 (992)
Q Consensus 723 -~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~ 801 (992)
.-++++++||+.|...+ ++.+. ++++..
T Consensus 186 le~~~lL~yTGi~R~Ss~---------------V~~dQ------------------------------------~~~~~~ 214 (333)
T COG2605 186 LEARLLLYYTGITRQSSE---------------VIEDQ------------------------------------VRNVVD 214 (333)
T ss_pred HHhceEEEEeccccchhH---------------HHHHH------------------------------------HHHhhc
Confidence 46899999999987543 11111 010000
Q ss_pred HHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHH
Q 001947 802 HRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLY 881 (992)
Q Consensus 802 ~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~ 881 (992)
.+-+. .++.|-+.+- +.+++.+|-.+ |+..||++|+
T Consensus 215 ~~~~~--------------------------------------~e~~~~mk~~--A~~~~~al~~n----d~~~f~~~l~ 250 (333)
T COG2605 215 GDEET--------------------------------------LEALHEMKAL--AYEMKDALVRN----DIPEFGQILD 250 (333)
T ss_pred ccHHH--------------------------------------HHHHHHHHHH--HHHHHHHHHhc----chHHHHHHHH
Confidence 00000 0112222221 45777788775 9999999999
Q ss_pred Hhhhhhhhc--CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhc
Q 001947 882 QCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDAT 959 (992)
Q Consensus 882 ~sH~slr~~--~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~ 959 (992)
++|+.-+.+ ++|.|.+|+|.+.|++ .|++|+|++|||.||.+.++++.... .+++++ .....
T Consensus 251 ~gW~~KK~ls~~ISN~~IDriy~~A~~-----------~GA~~gKl~GaG~gGFllf~~~p~k~-~~l~r~----l~~~~ 314 (333)
T COG2605 251 RGWEAKKKLSSRISNDAIDRIYELALK-----------NGAYGGKLSGAGGGGFLLFFCDPSKR-NELARA----LEKEQ 314 (333)
T ss_pred hHHHhhhhhccCcCcHHHHHHHHHHHh-----------cCchhceeeccCCccEEEEEeCccch-HHHHHH----HHHhc
Confidence 999999996 8999999999999998 79999999999999999877654432 344444 44455
Q ss_pred CCCCeEEeecCCCCceeE
Q 001947 960 GYLPLIIEGSSPGAGKFG 977 (992)
Q Consensus 960 g~~~~~~~~~~~Ga~~~~ 977 (992)
++.-+ +..+-+|++.+.
T Consensus 315 ~~~~~-~~Fd~~Gsr~i~ 331 (333)
T COG2605 315 GFVVD-TSFDKEGSRIIF 331 (333)
T ss_pred CCeEE-EEecCCCeEEEe
Confidence 55322 334678877653
No 21
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.95 E-value=1.7e-26 Score=262.51 Aligned_cols=326 Identities=14% Similarity=0.152 Sum_probs=208.8
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHH
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (992)
|+++.| .+|...||+.|+++||++|+++||+|.|++.... +....++...+.+.... ..++ .....+
T Consensus 1 ~~~i~~---~~GGTGGHi~Pala~a~~l~~~g~~v~~vg~~~~-~e~~l~~~~g~~~~~~~-~~~l--------~~~~~~ 67 (352)
T PRK12446 1 MKKIVF---TGGGSAGHVTPNLAIIPYLKEDNWDISYIGSHQG-IEKTIIEKENIPYYSIS-SGKL--------RRYFDL 67 (352)
T ss_pred CCeEEE---EcCCcHHHHHHHHHHHHHHHhCCCEEEEEECCCc-cccccCcccCCcEEEEe-ccCc--------CCCchH
Confidence 665444 4555579999999999999999999999976432 22222221112222210 0111 110011
Q ss_pred HHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCc---hHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHH
Q 001947 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVP---VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW 169 (992)
Q Consensus 93 ~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~---~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~ 169 (992)
..+...+ .......+...+++++|||+||+.-.+ +++++|+.+++|++.+.+.... +. .+
T Consensus 68 ~~~~~~~--~~~~~~~~~~~i~~~~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~----g~-----------~n 130 (352)
T PRK12446 68 KNIKDPF--LVMKGVMDAYVRIRKLKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTP----GL-----------AN 130 (352)
T ss_pred HHHHHHH--HHHHHHHHHHHHHHhcCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCc----cH-----------HH
Confidence 2222211 111234456778999999999987633 3678999999999988432211 00 11
Q ss_pred HHHhhccccceeeecCCCC-CCC-CCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHHHh-h-
Q 001947 170 QIAEDYSHCEFLIRLPGYC-PMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEE-Y- 243 (992)
Q Consensus 170 ~l~~~y~~~d~ll~~~~~~-~~p-~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll~~-l- 243 (992)
.+...+... .+..++... ..+ ....++++|+........+++.++.+++++++++|+|++||+|.. .+++.. +
T Consensus 131 r~~~~~a~~-v~~~f~~~~~~~~~~k~~~tG~Pvr~~~~~~~~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~ 209 (352)
T PRK12446 131 KIALRFASK-IFVTFEEAAKHLPKEKVIYTGSPVREEVLKGNREKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALP 209 (352)
T ss_pred HHHHHhhCE-EEEEccchhhhCCCCCeEEECCcCCcccccccchHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHH
Confidence 111111110 111222110 011 112355566544322233456667788888999999999999985 233332 1
Q ss_pred -CCCCcEE-EEeCCCCCC--C--CCCeEEcCCC-CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC---CCh
Q 001947 244 -LPSGWKC-LVCGASDSQ--L--PPNFIKLPKD-AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF---NEE 313 (992)
Q Consensus 244 -~~~~~~~-Vv~G~~~~~--l--~~nv~v~~f~-~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~---~EQ 313 (992)
...++.+ ++||.+..+ + ..++.+.+|. ++|+++|++||++|||+|++|++|++++|+|+|++|.+.. .+|
T Consensus 210 ~l~~~~~vv~~~G~~~~~~~~~~~~~~~~~~f~~~~m~~~~~~adlvIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q 289 (352)
T PRK12446 210 ELLLKYQIVHLCGKGNLDDSLQNKEGYRQFEYVHGELPDILAITDFVISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQ 289 (352)
T ss_pred hhccCcEEEEEeCCchHHHHHhhcCCcEEecchhhhHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEEcCCCCCCCchH
Confidence 1234644 478976421 1 1456778998 6899999999999999999999999999999999997542 479
Q ss_pred HHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc------CCCCHHHHHHHHHHH
Q 001947 314 PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE------GGINGGEVAAHILQE 369 (992)
Q Consensus 314 ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~------~~~~G~~~aA~~I~~ 369 (992)
..||+++++.|++..+..++++++.+.+++.++++++..+. ...++++++++.|++
T Consensus 290 ~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~~~~~~~~~~~~aa~~i~~~i~~ 351 (352)
T PRK12446 290 ILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKYKTALKKYNGKEAIQTIIDHISE 351 (352)
T ss_pred HHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHHHHHHHHcCCCCHHHHHHHHHHh
Confidence 99999999999999999889999999999999987654322 466888888877754
No 22
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.94 E-value=2.9e-25 Score=250.26 Aligned_cols=307 Identities=17% Similarity=0.132 Sum_probs=185.4
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCC-cccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD-FVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (992)
+|+|+++|+|+||++|+++||++|++ ||+|+|++.... ..+.... .+.+...+ +.. +...++ .++..+++...
T Consensus 1 ril~~~~g~G~GH~~r~~ala~~L~~-g~ev~~~~~~~~~~~~~~~~-~~~~~~~p-~~~--~~~~~~-~~~~~~~l~~~ 74 (321)
T TIGR00661 1 KILYSVCGEGFGHTTRSVAIGEALKN-DYEVSYIASGRSKNYISKYG-FKVFETFP-GIK--LKGEDG-KVNIVKTLRNK 74 (321)
T ss_pred CEEEEEeccCccHHHHHHHHHHHHhC-CCeEEEEEcCCHHHhhhhhc-CcceeccC-Cce--EeecCC-cCcHHHHHHhh
Confidence 47789999999999999999999999 999999876541 1111110 01111111 001 111111 23444443322
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHH-Hhh
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQI-AED 174 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~ 174 (992)
..+ ....+.++.+++++++||+||+|..+.+.++|+.++||++.+.+. +...+.... ....+..+.+ ...
T Consensus 75 ~~~----~~~~~~~~~~~l~~~~pDlVi~d~~~~~~~aA~~~~iP~i~i~~q-~~~~~~~~~----~~~~~~~~~~~~~~ 145 (321)
T TIGR00661 75 EYS----PKKAIRREINIIREYNPDLIISDFEYSTVVAAKLLKIPVICISNQ-NYTRYPLKT----DLIVYPTMAALRIF 145 (321)
T ss_pred ccc----cHHHHHHHHHHHHhcCCCEEEECCchHHHHHHHhcCCCEEEEecc-hhhcCCccc----chhHHHHHHHHHHh
Confidence 121 113466778899999999999999988999999999999988652 111011000 0011111122 222
Q ss_pred ccccceeeecCCCCCCCCCCceeecCcccc-cC-CCChHHHHHHhCCCCCCcEEEEEcCCCCChhhHHHhhCC-CCcEEE
Q 001947 175 YSHCEFLIRLPGYCPMPAFRDVIDVPLVVR-RL-HKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLP-SGWKCL 251 (992)
Q Consensus 175 y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~-~~-~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~-~~~~~V 251 (992)
+..++.+....+..+...+ |.... .+ +..+.+..+. .+.+.+.|++++|+.+.. .+++.+.. +.+.++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~------p~~~~~~~~~~~~~~~~~~--~~~~~~~iLv~~g~~~~~-~l~~~l~~~~~~~~i 216 (321)
T TIGR00661 146 NERCERFIVPDYPFPYTIC------PKIIKNMEGPLIRYDVDDV--DNYGEDYILVYIGFEYRY-KILELLGKIANVKFV 216 (321)
T ss_pred ccccceEeeecCCCCCCCC------ccccccCCCcccchhhhcc--ccCCCCcEEEECCcCCHH-HHHHHHHhCCCeEEE
Confidence 2333433222211111111 21111 01 1111122111 133567788898876653 45555533 233444
Q ss_pred EeCCCCC--CCCCCeEEcCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEE
Q 001947 252 VCGASDS--QLPPNFIKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE 328 (992)
Q Consensus 252 v~G~~~~--~l~~nv~v~~f~~-~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~ 328 (992)
+.+.... .+++|+.+.+|.. ++.++|+.||++|||+|++|++|++++|+|+|++|.+.+.||..||+.+++.|+|+.
T Consensus 217 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~ad~vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~ 296 (321)
T TIGR00661 217 CYSYEVAKNSYNENVEIRRITTDNFKELIKNAELVITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIA 296 (321)
T ss_pred EeCCCCCccccCCCEEEEECChHHHHHHHHhCCEEEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEE
Confidence 3332221 2678999988884 788999999999999999999999999999999999878899999999999999999
Q ss_pred EecCCCChhhHHHHHHHHhhCC
Q 001947 329 MIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 329 v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++..++ .+.+++.+.+++.
T Consensus 297 l~~~~~---~~~~~~~~~~~~~ 315 (321)
T TIGR00661 297 LEYKEL---RLLEAILDIRNMK 315 (321)
T ss_pred cChhhH---HHHHHHHhccccc
Confidence 987665 3334444444433
No 23
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.94 E-value=7.5e-26 Score=263.17 Aligned_cols=345 Identities=18% Similarity=0.120 Sum_probs=201.3
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCccccccccc-----ChHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTV-----DRLA 90 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~ 90 (992)
|+|+|+.. ++.||++|+++||++|+++||+|+|++... +...+...++.+.+...+........... ....
T Consensus 1 mrIl~~~~-p~~GHv~P~l~la~~L~~rGh~V~~~t~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T cd03784 1 MRVLITTI-GSRGDVQPLVALAWALRAAGHEVRVATPPE---FADLVEAAGLEFVPVGGDPDELLASPERNAGLLLLGPG 76 (401)
T ss_pred CeEEEEeC-CCcchHHHHHHHHHHHHHCCCeEEEeeCHh---HHHHHHHcCCceeeCCCCHHHHHhhhhhcccccccchH
Confidence 45666544 589999999999999999999999998763 11111111222323211111110000000 0011
Q ss_pred HHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchhHH----------HH-HHH-
Q 001947 91 SLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDFI----------YA-EYV- 157 (992)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~~~~----------~~-~~~- 157 (992)
........+.......+.+..+.+++++||+||+|. .+++..+|+.+|||++.+....|... .. .+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~pDlvi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (401)
T cd03784 77 LLLGALRLLRREAEAMLDDLVAAARDWGPDLVVADPLAFAGAVAAEALGIPAVRLLLGPDTPTSAFPPPLGRANLRLYAL 156 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCCCEEEeCcHHHHHHHHHHHhCCCeEEeecccCCccccCCCccchHHHHHHHH
Confidence 111222222233444556666777789999999995 77788899999999998854332100 00 000
Q ss_pred hhhc---cchHHHHHHHHhhccc---------c-ceeeecCCCC--CCCCCC---ceeecCccccc-CCCChHHHHHHhC
Q 001947 158 MAAG---HHHRSIVWQIAEDYSH---------C-EFLIRLPGYC--PMPAFR---DVIDVPLVVRR-LHKSRKEVRKELG 218 (992)
Q Consensus 158 ~~~~---~~~~~i~~~l~~~y~~---------~-d~ll~~~~~~--~~p~~~---~v~~vp~~~~~-~~~~r~e~r~~l~ 218 (992)
.... .............+.. . ..++.+++.. ..++.+ ...+.+..... ......++..++.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (401)
T cd03784 157 LEAELWQDLLGAWLRARRRRLGLPPLSLLDGSDVPELYGFSPAVLPPPPDWPRFDLVTGYGFRDVPYNGPPPPELWLFLA 236 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCcccccCCCcEEEecCcccCCCCCCccccCcEeCCCCCCCCCCCCCCHHHHHHHh
Confidence 0000 0000011111121211 0 1111111111 111111 11111111111 1112234444443
Q ss_pred CCCCCcEEEEEcCCCCCh--hhH----HHhhCCCCcEEE-EeCCCCC---CCCCCeEEcCCCCCHHHHHhhcCEEEecCC
Q 001947 219 IEDDVKLLILNFGGQPAG--WKL----KEEYLPSGWKCL-VCGASDS---QLPPNFIKLPKDAYTPDFMAASDCMLGKIG 288 (992)
Q Consensus 219 ~~~d~~~Vlvs~Gg~~~~--~~l----l~~l~~~~~~~V-v~G~~~~---~l~~nv~v~~f~~~~p~lL~aaDlvIt~~G 288 (992)
+++++|||++||.+.. ..+ ++.+...++.++ .+|.... .+++|+.+.+|++ +.++|++||+||||||
T Consensus 237 --~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~~~~~~~~v~~~~~~p-~~~ll~~~d~~I~hgG 313 (401)
T cd03784 237 --AGRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLGAEDLPDNVRVVDFVP-HDWLLPRCAAVVHHGG 313 (401)
T ss_pred --CCCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCccccccCCCCceEEeCCCC-HHHHhhhhheeeecCC
Confidence 5788999999998652 223 223433456544 5565442 2688999999875 5689999999999999
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc--------CCCCHH
Q 001947 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--------GGINGG 360 (992)
Q Consensus 289 ~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~--------~~~~G~ 360 (992)
+||++|++++|+|+|++|. ..||+.||+++++.|+|+.+...+++++.+.++|+++++++.+.. ...+|.
T Consensus 314 ~~t~~eal~~GvP~v~~P~--~~dQ~~~a~~~~~~G~g~~l~~~~~~~~~l~~al~~~l~~~~~~~~~~~~~~~~~~~g~ 391 (401)
T cd03784 314 AGTTAAALRAGVPQLVVPF--FGDQPFWAARVAELGAGPALDPRELTAERLAAALRRLLDPPSRRRAAALLRRIREEDGV 391 (401)
T ss_pred chhHHHHHHcCCCEEeeCC--CCCcHHHHHHHHHCCCCCCCCcccCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHhccCH
Confidence 9999999999999999994 568999999999999999998887888999999999987432211 256677
Q ss_pred HHHHHHHHH
Q 001947 361 EVAAHILQE 369 (992)
Q Consensus 361 ~~aA~~I~~ 369 (992)
.++++.|++
T Consensus 392 ~~~~~~ie~ 400 (401)
T cd03784 392 PSAADVIER 400 (401)
T ss_pred HHHHHHHhh
Confidence 777777654
No 24
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=1.1e-24 Score=244.88 Aligned_cols=318 Identities=19% Similarity=0.156 Sum_probs=202.3
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCc-EEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhh
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHD-VHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~Ghe-V~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 100 (992)
..|.+.||+.|+++|+++|.++|++ |.++.... ...........+.++.+ +.+.... . .. +..+...+.
T Consensus 6 ~~gGTGGHv~pAlAl~~~l~~~g~~~v~~~~~~~-~~e~~l~~~~~~~~~~I--~~~~~~~-~---~~---~~~~~~~~~ 75 (357)
T COG0707 6 TAGGTGGHVFPALALAEELAKRGWEQVIVLGTGD-GLEAFLVKQYGIEFELI--PSGGLRR-K---GS---LKLLKAPFK 75 (357)
T ss_pred EeCCCccchhHHHHHHHHHHhhCccEEEEecccc-cceeeeccccCceEEEE--ecccccc-c---Cc---HHHHHHHHH
Confidence 4455579999999999999999995 55553321 11111111111222221 1111110 0 00 111111111
Q ss_pred ccHHHhHHHHHHHHHcCCCcEEEECC---CchHHHHHHHcCCcEEEE-ecCchhHHHHHHHhhhccchHHHHHHHHhhcc
Q 001947 101 APRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (992)
Q Consensus 101 ~~~~~~l~~~~~~L~~~kPDlVVsD~---~~~a~~aA~~~gIP~v~i-s~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~ 176 (992)
.+ ..+.++.++|+++|||+|++.. ...+.++|..++||++.+ +|+.... .+.+...+.
T Consensus 76 -~~-~~~~~a~~il~~~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~----------------ank~~~~~a 137 (357)
T COG0707 76 -LL-KGVLQARKILKKLKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGL----------------ANKILSKFA 137 (357)
T ss_pred -HH-HHHHHHHHHHHHcCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcch----------------hHHHhHHhh
Confidence 11 1356678899999999999864 445678889999999998 6654110 111111111
Q ss_pred ccceee-ecC--CCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHHHhh---CCCCc
Q 001947 177 HCEFLI-RLP--GYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---LPSGW 248 (992)
Q Consensus 177 ~~d~ll-~~~--~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll~~l---~~~~~ 248 (992)
+.+. .++ .....+....++++|+..........+++.... .++++|+|++||+|+. .+++.+. +...+
T Consensus 138 --~~V~~~f~~~~~~~~~~~~~~tG~Pvr~~~~~~~~~~~~~~~~--~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~~~ 213 (357)
T COG0707 138 --KKVASAFPKLEAGVKPENVVVTGIPVRPEFEELPAAEVRKDGR--LDKKTILVTGGSQGAKALNDLVPEALAKLANRI 213 (357)
T ss_pred --ceeeeccccccccCCCCceEEecCcccHHhhccchhhhhhhcc--CCCcEEEEECCcchhHHHHHHHHHHHHHhhhCe
Confidence 1111 111 001111112355666544322212233333322 2789999999999995 2333322 12245
Q ss_pred EE-EEeCCCCCC-----C-CCC-eEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC--CChHHHHH
Q 001947 249 KC-LVCGASDSQ-----L-PPN-FIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF--NEEPFLRN 318 (992)
Q Consensus 249 ~~-Vv~G~~~~~-----l-~~n-v~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~--~EQ~~NA~ 318 (992)
.+ ..||++..+ . ..+ +++.+|.++|+++|++||++||++|.+|++|.+++|+|+|++|.+.. ++|..||+
T Consensus 214 ~v~~~~G~~~~~~~~~~~~~~~~~~v~~f~~dm~~~~~~ADLvIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~ 293 (357)
T COG0707 214 QVIHQTGKNDLEELKSAYNELGVVRVLPFIDDMAALLAAADLVISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAK 293 (357)
T ss_pred EEEEEcCcchHHHHHHHHhhcCcEEEeeHHhhHHHHHHhccEEEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHH
Confidence 44 467887521 1 123 88999999999999999999999999999999999999999998876 58888999
Q ss_pred HHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 001947 319 MLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (992)
Q Consensus 319 ~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~~~ 371 (992)
.+++.|+|.+++..+++++.+.+.|.++++++.... ..+|.++++++.++...
T Consensus 294 ~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~~~~~~~~ 355 (357)
T COG0707 294 FLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIADLLLALA 355 (357)
T ss_pred HHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999998754421 57888888888888764
No 25
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.92 E-value=3.2e-24 Score=237.49 Aligned_cols=262 Identities=12% Similarity=0.171 Sum_probs=187.8
Q ss_pred EEEEcCccccc----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L----~GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.++||||||| +|+|.| ||+..++.+||+++.++.+++.++.+ +.+.+.
T Consensus 3 ~~~~apakinl~l~i~g~~~dg~h~l~si~~ai~l~~~v~v~~~~~~~---------------------~~i~~~----- 56 (286)
T PRK00128 3 ILEKAPAKINLSLDVLGKREDGYHEVEMIMQTIDLADRLEIEKLKEDG---------------------IVVESN----- 56 (286)
T ss_pred EEEeccceEEEEeecCccCCCCcceeheeeEecCCCcEEEEEECCCCC---------------------EEEEeC-----
Confidence 56899999999 899999 99999999999999999999876432 222110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
+ .+ . ...|.|++..++..+.+.++.. .|++|.|.++||.++|||||||.
T Consensus 57 --------~-~~-------------------~-~~~~~n~~~~~~~~~~~~~~~~--~~~~i~i~~~iP~~~GLGSSsa~ 105 (286)
T PRK00128 57 --------N-RY-------------------V-PNDERNLAYKAAKLLKERYNIK--QGVSITIDKNIPVAAGLAGGSSD 105 (286)
T ss_pred --------C-CC-------------------C-CCCCCcHHHHHHHHHHHhcCCC--CCeEEEEEcCCCccccchHHHHH
Confidence 0 00 0 1246778888888777666654 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeC
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 731 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~ds 731 (992)
.+|++.|++++++.++++++++++|.++|. |..++++||. ++...+.... .+++.++++.++++++
T Consensus 106 a~a~~~al~~~~~~~l~~~~l~~~a~~~g~----------dv~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p 171 (286)
T PRK00128 106 AAATLRGLNKLWNLGLSLEELAEIGLEIGS----------DVPFCIYGGT---ALATGRGEKI-TPLKSPPSCWVVLAKP 171 (286)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHhCC----------CCCeEeeCCe---EEEecCCccc-ccCCCCCCcEEEEEcC
Confidence 999999999999999999999999998762 6778999984 3443333222 4455455778999987
Q ss_pred CCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhc
Q 001947 732 GIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKN 811 (992)
Q Consensus 732 gi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~ 811 (992)
+...+|.. +.+ .
T Consensus 172 ~~~~~T~~---------------~~~-----------------------------------------------------~ 183 (286)
T PRK00128 172 DIGVSTKD---------------VYK-----------------------------------------------------N 183 (286)
T ss_pred CCCCCHHH---------------HHh-----------------------------------------------------c
Confidence 76554421 000 0
Q ss_pred CCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcC
Q 001947 812 IPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACG 891 (992)
Q Consensus 812 lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~ 891 (992)
++. ++.. ...+..+..++..+ |++.+|++|+. .+..++
T Consensus 184 ~~~------------------------------~~~~-----~~~~~~~~~~l~~~----d~~~~~~~~~n---~l~~~~ 221 (286)
T PRK00128 184 LDL------------------------------DKIS-----HPDTEKLIEAIEEG----DYQGICANMGN---VLENVT 221 (286)
T ss_pred Ccc------------------------------cccc-----CcchHHHHHHHhcC----CHHHHHHhccC---cHHHHH
Confidence 000 0000 00134566777775 89999999853 344455
Q ss_pred C-CCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHH
Q 001947 892 L-GSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQ 952 (992)
Q Consensus 892 v-s~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~ 952 (992)
+ .+|+++++++.+++ .|++|++|||+| +|++++.++..+++++.++++
T Consensus 222 ~~~~p~l~~l~~~~~~-----------~Ga~g~~lSGsG--~sv~~l~~~~~~~~~i~~~l~ 270 (286)
T PRK00128 222 LKKYPEIAKIKERMLK-----------FGADGALMSGSG--PTVFGLFDDESRAQRIYNGLK 270 (286)
T ss_pred HhhChHHHHHHHHHHh-----------cCCCeeEEcccC--ccEEEEeCCHHHHHHHHHHhH
Confidence 5 48999999999987 689999999999 999888765332234444443
No 26
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.92 E-value=3.1e-24 Score=247.39 Aligned_cols=341 Identities=18% Similarity=0.206 Sum_probs=204.1
Q ss_pred cEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecc-cCCcccccccccChHHHHH
Q 001947 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLL-DCGAVQADALTVDRLASLE 93 (992)
Q Consensus 15 ~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 93 (992)
+|+|+|+.++. .||++||++|+++|+++||+|+|+|... +.+.+...+..+..... +.-....+. ..+...+..
T Consensus 1 ~mkil~~~~~~-~Ghv~p~~aL~~eL~~~gheV~~~~~~~---~~~~ve~ag~~f~~~~~~~~~~~~~~~-~~~~~~~~~ 75 (406)
T COG1819 1 RMKILFVVCGA-YGHVNPCLALGKELRRRGHEVVFASTGK---FKEFVEAAGLAFVAYPIRDSELATEDG-KFAGVKSFR 75 (406)
T ss_pred CceEEEEeccc-cccccchHHHHHHHHhcCCeEEEEeCHH---HHHHHHHhCcceeeccccCChhhhhhh-hhhccchhH
Confidence 36888888888 9999999999999999999999998763 11111111111111100 100000000 011111111
Q ss_pred -HHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchh----------HH--HHH-----
Q 001947 94 -KYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWD----------FI--YAE----- 155 (992)
Q Consensus 94 -~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~~~----------~~--~~~----- 155 (992)
.+. .......+..+.+.+..||+|+.|...+..++++..++|++...+-.|. .+ ...
T Consensus 76 ~~~~-----~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (406)
T COG1819 76 RLLQ-----QFKKLIRELLELLRELEPDLVVDDARLSLGLAARLLGIPVVGINVAPYTPLPAAGLPLPPVGIAGKLPIPL 150 (406)
T ss_pred HHhh-----hhhhhhHHHHHHHHhcchhhhhcchhhhhhhhhhhcccchhhhhhhhccCCcccccCcccccccccccccc
Confidence 111 1222345667888999999999998666667888888887765221110 00 000
Q ss_pred --HHhhhcc-c--hHHHHHHHHhhccc-cc-------eeeecCCC--------CCCC--CCC-ceeecCcccccCCCChH
Q 001947 156 --YVMAAGH-H--HRSIVWQIAEDYSH-CE-------FLIRLPGY--------CPMP--AFR-DVIDVPLVVRRLHKSRK 211 (992)
Q Consensus 156 --~~~~~~~-~--~~~i~~~l~~~y~~-~d-------~ll~~~~~--------~~~p--~~~-~v~~vp~~~~~~~~~r~ 211 (992)
....... . ...........+.. .. .++..++. ...| .++ ....+|+...... .
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~---~ 227 (406)
T COG1819 151 YPLPPRLVRPLIFARSWLPKLVVRRNLGLELGLPNIRRLFASGPLLEIAYTDVLFPPGDRLPFIGPYIGPLLGEAA---N 227 (406)
T ss_pred cccChhhccccccchhhhhhhhhhhhccccccccchHHHhcCCCCccccccccccCCCCCCCCCcCcccccccccc---c
Confidence 0000000 0 00000000000000 00 00000000 0000 001 0111222211111 1
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCChhh----HHHhhCCCCcEEEEe-CCCCCC---CCCCeEEcCCCCCHHHHHhhcCEE
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPAGWK----LKEEYLPSGWKCLVC-GASDSQ---LPPNFIKLPKDAYTPDFMAASDCM 283 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~~~~----ll~~l~~~~~~~Vv~-G~~~~~---l~~nv~v~~f~~~~p~lL~aaDlv 283 (992)
+. ...++.|+|+||+++||.+...+ +++++...++++++. |..... +|.|+.+.+|++. ..+++.||+|
T Consensus 228 ~~--~~~~~~d~~~vyvslGt~~~~~~l~~~~~~a~~~l~~~vi~~~~~~~~~~~~~p~n~~v~~~~p~-~~~l~~ad~v 304 (406)
T COG1819 228 EL--PYWIPADRPIVYVSLGTVGNAVELLAIVLEALADLDVRVIVSLGGARDTLVNVPDNVIVADYVPQ-LELLPRADAV 304 (406)
T ss_pred cC--cchhcCCCCeEEEEcCCcccHHHHHHHHHHHHhcCCcEEEEeccccccccccCCCceEEecCCCH-HHHhhhcCEE
Confidence 11 11145789999999999985322 233455678877765 442222 7999999987653 4799999999
Q ss_pred EecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------
Q 001947 284 LGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--------- 354 (992)
Q Consensus 284 It~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~--------- 354 (992)
|||||+||++|||++|||+|++| ...||+.||.++++.|+|+.+..+.++++.++++|+++|+++...+
T Consensus 305 I~hGG~gtt~eaL~~gvP~vv~P--~~~DQ~~nA~rve~~G~G~~l~~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~ 382 (406)
T COG1819 305 IHHGGAGTTSEALYAGVPLVVIP--DGADQPLNAERVEELGAGIALPFEELTEERLRAAVNEVLADDSYRRAAERLAEEF 382 (406)
T ss_pred EecCCcchHHHHHHcCCCEEEec--CCcchhHHHHHHHHcCCceecCcccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 99999999999999999999999 4589999999999999999999999999999999999998765422
Q ss_pred CCCCHHHHHHHHHHHHHcc
Q 001947 355 GGINGGEVAAHILQETAIG 373 (992)
Q Consensus 355 ~~~~G~~~aA~~I~~~~~~ 373 (992)
...+|.+.+|+.|+++...
T Consensus 383 ~~~~g~~~~a~~le~~~~~ 401 (406)
T COG1819 383 KEEDGPAKAADLLEEFARE 401 (406)
T ss_pred hhcccHHHHHHHHHHHHhc
Confidence 5788899999999998654
No 27
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=99.92 E-value=3e-23 Score=240.60 Aligned_cols=336 Identities=15% Similarity=0.113 Sum_probs=200.3
Q ss_pred cCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcc-cccccccChHHHHHHHHHHhhc
Q 001947 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV-QADALTVDRLASLEKYSETAVA 101 (992)
Q Consensus 23 ~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~ 101 (992)
..++.||++|.++||++|+++||+|+|++... +.+.+...++.+...+...... .... ... .....+...+..
T Consensus 2 ~~p~~Ghv~P~l~lA~~L~~~Gh~V~~~~~~~---~~~~v~~~G~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~ 75 (392)
T TIGR01426 2 NIPAHGHVNPTLGVVEELVARGHRVTYATTEE---FAERVEAAGAEFVLYGSALPPPDNPPE-NTE--EEPIDIIEKLLD 75 (392)
T ss_pred CCCccccccccHHHHHHHHhCCCeEEEEeCHH---HHHHHHHcCCEEEecCCcCcccccccc-ccC--cchHHHHHHHHH
Confidence 34568999999999999999999999998753 1222211122222221111100 0000 000 111112222211
Q ss_pred cHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchhH-HHH--------HHHhhh---ccchHHHH
Q 001947 102 PRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWDF-IYA--------EYVMAA---GHHHRSIV 168 (992)
Q Consensus 102 ~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~~~-~~~--------~~~~~~---~~~~~~i~ 168 (992)
.....+....+++++++||+||.|. .+++..+|+.+|||+|.++...+.. .+. ...... ......+.
T Consensus 76 ~~~~~~~~l~~~~~~~~pDlVi~d~~~~~~~~~A~~~giP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (392)
T TIGR01426 76 EAEDVLPQLEEAYKGDRPDLIVYDIASWTGRLLARKWDVPVISSFPTFAANEEFEEMVSPAGEGSAEEGAIAERGLAEYV 155 (392)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEECCccHHHHHHHHHhCCCEEEEehhhcccccccccccccchhhhhhhccccchhHHHH
Confidence 2233444456677888999999997 5788899999999999874321100 000 000000 00001111
Q ss_pred H---HHHhhcc----c--------cc-eeeecCCCCC--CCCC-CceeecCcccccCCCChHHHHHHhCCCCCCcEEEEE
Q 001947 169 W---QIAEDYS----H--------CE-FLIRLPGYCP--MPAF-RDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILN 229 (992)
Q Consensus 169 ~---~l~~~y~----~--------~d-~ll~~~~~~~--~p~~-~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs 229 (992)
+ .+...+. . .+ .+...+..+. .+.+ .+++.+|+...... +...++...+++++||++
T Consensus 156 ~~~~~~r~~~gl~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~Gp~~~~~~----~~~~~~~~~~~~~~v~vs 231 (392)
T TIGR01426 156 ARLSALLEEHGITTPPVEFLAAPRRDLNLVYTPKAFQPAGETFDDSFTFVGPCIGDRK----EDGSWERPGDGRPVVLIS 231 (392)
T ss_pred HHHHHHHHHhCCCCCCHHHHhcCCcCcEEEeCChHhCCCccccCCCeEEECCCCCCcc----ccCCCCCCCCCCCEEEEe
Confidence 1 1112111 0 00 1111121111 1112 23566666433211 111133334678899999
Q ss_pred cCCCCCh-h----hHHHhhCCCCcEEE-EeCCCCC-----CCCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHc
Q 001947 230 FGGQPAG-W----KLKEEYLPSGWKCL-VCGASDS-----QLPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAY 298 (992)
Q Consensus 230 ~Gg~~~~-~----~ll~~l~~~~~~~V-v~G~~~~-----~l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~ 298 (992)
+|+.... . .+++.+...++.++ .+|.... .+++|+.+.+|++. .++|++||++|+|+|++|++|++++
T Consensus 232 ~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~~~~~~~~~~v~~~~~~p~-~~ll~~~~~~I~hgG~~t~~Eal~~ 310 (392)
T TIGR01426 232 LGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDPADLGELPPNVEVRQWVPQ-LEILKKADAFITHGGMNSTMEALFN 310 (392)
T ss_pred cCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCChhHhccCCCCeEEeCCCCH-HHHHhhCCEEEECCCchHHHHHHHh
Confidence 9996332 1 23334545565444 5565432 15789999888764 4899999999999999999999999
Q ss_pred CCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHH
Q 001947 299 KLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQE 369 (992)
Q Consensus 299 GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~ 369 (992)
|+|+|++|. ..||..|++++++.|+|+.+...+++++.+.++|.+++.++.... ...+|.+++++.|++
T Consensus 311 G~P~v~~p~--~~dq~~~a~~l~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~ 388 (392)
T TIGR01426 311 GVPMVAVPQ--GADQPMTARRIAELGLGRHLPPEEVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEG 388 (392)
T ss_pred CCCEEecCC--cccHHHHHHHHHHCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999999994 579999999999999999998888888999999999998764211 356788888888877
Q ss_pred HH
Q 001947 370 TA 371 (992)
Q Consensus 370 ~~ 371 (992)
.+
T Consensus 389 ~~ 390 (392)
T TIGR01426 389 FL 390 (392)
T ss_pred hh
Confidence 64
No 28
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.91 E-value=3.6e-23 Score=231.54 Aligned_cols=296 Identities=13% Similarity=0.169 Sum_probs=199.5
Q ss_pred EEEEcCccccc----cccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDV----MGGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L----~GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.++||||||| +|+|.| |++..++.++|+++.++.+++.++.. +.+.+..
T Consensus 4 ~~~~apakiNL~L~i~g~~~dGy~~l~~~~~~i~l~d~v~v~~~~~~~---------------------~~~~~~~---- 58 (312)
T PRK02534 4 YTLIAPAKINLHLEILGDRPDGFHELAMVMQSIDLADRLELRNNGDGT---------------------IRLHCDH---- 58 (312)
T ss_pred EEEEeceEEEeccccCccCCCCCCceEEEEEECCCCCEEEEEECCCCc---------------------EEEEECC----
Confidence 56789999999 799999 99999999999999999999876432 2221110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
.++ .....|++..++..++++++.+. .|++|.|.++||.++|||||||.
T Consensus 59 ----------~~~--------------------~~~~~n~~~~~~~~~~~~~~~~~-~~~~i~i~~~IP~~~GLGSssa~ 107 (312)
T PRK02534 59 ----------PQL--------------------STDDDNLIYRAAQLLRKRFPFAE-GGVDITLEKRIPIGAGLAGGSTD 107 (312)
T ss_pred ----------CCC--------------------CCCchhHHHHHHHHHHHHhCCCC-CCeEEEEecCCCCcCCccHHHHH
Confidence 001 01236788888888777777653 68999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEE-e
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI-D 730 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~-d 730 (992)
++|++.|++.+++.++++++++++|.++|. |-.++++||. ++. ....+...+++.|+++.++++ +
T Consensus 108 ~~A~~~al~~~~~~~l~~~~l~~~a~~~g~----------dv~~~~~GG~---~~~-~~~g~~~~~~~~~~~~~~vv~~~ 173 (312)
T PRK02534 108 AAAVLVGLNLLWGLGLTQPELESLAAELGS----------DVPFCIAGGT---QLC-FGRGEILEPLPDLDGLGVVLAKY 173 (312)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------CCcEEeECCe---EEE-ECCCCEeEECCCCCCcEEEEEEC
Confidence 999999999999999999999999998762 4467889984 222 222222356666678888886 6
Q ss_pred CCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhh
Q 001947 731 SGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAK 810 (992)
Q Consensus 731 sgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~ 810 (992)
++..-+|.. .|+ .++ +
T Consensus 174 p~~~~~T~~-a~~---------------------------------------------------~~~------------~ 189 (312)
T PRK02534 174 PSLSVSTPW-AYK---------------------------------------------------TYR------------Q 189 (312)
T ss_pred CCCCccHHH-HHH---------------------------------------------------HHh------------h
Confidence 776654431 010 011 1
Q ss_pred cCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhc
Q 001947 811 NIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSAC 890 (992)
Q Consensus 811 ~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~ 890 (992)
.+|+.++ ........+.+..|......+|.++ |++.+++.| |+.|+..
T Consensus 190 ~~~~~~~-------------------------~~~~~~~~~~~~~~~~~l~~al~~~----d~~~~~~~~---~n~l~~~ 237 (312)
T PRK02534 190 QFGDTYL-------------------------SDEEDFEQRRQALRSGPLLQAISAK----DPPPIAQLL---HNDLEKV 237 (312)
T ss_pred hcccccc-------------------------cCcccccccccccchhHHHHhhhcc----CHHHHHHhh---hCchHHH
Confidence 1221110 0000111222333445567777775 899888766 7888885
Q ss_pred CC-CCchHHHHHHHHH-HHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee
Q 001947 891 GL-GSDGTDRLVQLVQ-EIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG 968 (992)
Q Consensus 891 ~v-s~~~lD~lv~~a~-~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~ 968 (992)
-+ .+|+++++++.++ + .|++|+.|||+| +|++++.++..+++++.+++++.+.. ....+++.
T Consensus 238 ~~~~~~~i~~~~~~l~~~-----------~Ga~~~~lSGsG--ptv~~l~~~~~~a~~~~~~l~~~~~~---~~~~v~i~ 301 (312)
T PRK02534 238 VLPEYPQVAKLLELLSSL-----------PGCLGTMMSGSG--PTCFALFESQEQAEQALEQVREAFAD---PGLDAWVC 301 (312)
T ss_pred hHhcChHHHHHHHHHHhc-----------cCCCeeEEECcC--cceEEEeCCHHHHHHHHHHHHHHhcc---CceEEEEE
Confidence 33 6788888777665 5 688999999888 99998886543334455555544321 11245554
Q ss_pred --cCCCCc
Q 001947 969 --SSPGAG 974 (992)
Q Consensus 969 --~~~Ga~ 974 (992)
...|+.
T Consensus 302 ~~~n~G~~ 309 (312)
T PRK02534 302 QFISHGIQ 309 (312)
T ss_pred EecCCCce
Confidence 466663
No 29
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=99.91 E-value=8.7e-22 Score=233.13 Aligned_cols=360 Identities=11% Similarity=0.069 Sum_probs=217.5
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCccc----c-ccccc----
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQ----A-DALTV---- 86 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~----~-~~~~~---- 86 (992)
.+|+.+++..|..|..-...|+++|.+|||+|++++..+....... ..+.+..-.......... . +....
T Consensus 21 ~kIl~~~P~~~~SH~~~~~~l~~~La~rGH~VTvi~p~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (507)
T PHA03392 21 ARILAVFPTPAYSHHSVFKVYVEALAERGHNVTVIKPTLRVYYASH-LCGNITEIDASLSVEYFKKLVKSSAVFRKRGVV 99 (507)
T ss_pred ccEEEEcCCCCCcHHHHHHHHHHHHHHcCCeEEEEecccccccccC-CCCCEEEEEcCCChHHHHHHHhhhhHHHhhhhh
Confidence 3466566778899999999999999999999999976542221110 111111111100000000 0 00000
Q ss_pred -ChHHHHHHHHHHhhccHHHhH--HHHHHHHH--cCCCcEEEECC-CchHHHHHHHc-CCcEEEEecCc---hh-HHH--
Q 001947 87 -DRLASLEKYSETAVAPRKSIL--KDEVEWLN--SIKADLVVSDV-VPVACRAAADA-GIRSVCVTNFS---WD-FIY-- 153 (992)
Q Consensus 87 -~~~~~~~~~~~~~~~~~~~~l--~~~~~~L~--~~kPDlVVsD~-~~~a~~aA~~~-gIP~v~is~~~---~~-~~~-- 153 (992)
+...........+...+...+ .+..++|+ +.++|+||+|. ..+++..|+.+ ++|.|.++.+. +. ...
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~~~~gg 179 (507)
T PHA03392 100 ADSSTVTADNYMGLVRMISDQFDLPNVKNLIANKNNKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENFETMGA 179 (507)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHCCHHHHHHHhcCCCceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHHHhhcc
Confidence 000000000011011122222 12357777 77899999996 77788889999 99988874422 11 000
Q ss_pred ----HHHHhhhccc-------hHHH-------------------HHHHHh-hccc-----------cceee-ecCC--CC
Q 001947 154 ----AEYVMAAGHH-------HRSI-------------------VWQIAE-DYSH-----------CEFLI-RLPG--YC 188 (992)
Q Consensus 154 ----~~~~~~~~~~-------~~~i-------------------~~~l~~-~y~~-----------~d~ll-~~~~--~~ 188 (992)
..|+|..... .+.+ .+++.+ .|.. .+.++ ...+ ..
T Consensus 180 ~p~~~syvP~~~~~~~~~Msf~~R~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~ 259 (507)
T PHA03392 180 VSRHPVYYPNLWRSKFGNLNVWETINEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDN 259 (507)
T ss_pred CCCCCeeeCCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccC
Confidence 1122211000 0000 001111 1111 11112 1111 22
Q ss_pred CCCCCCceeecCccccc--C-CCChHHHHHHhCCCCCCcEEEEEcCCCCC----hh----hHHHhhCCCCcEEEEe-CC-
Q 001947 189 PMPAFRDVIDVPLVVRR--L-HKSRKEVRKELGIEDDVKLLILNFGGQPA----GW----KLKEEYLPSGWKCLVC-GA- 255 (992)
Q Consensus 189 ~~p~~~~v~~vp~~~~~--~-~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~----~~----~ll~~l~~~~~~~Vv~-G~- 255 (992)
+.|-.++++.+|++... . ...++++.+++.- ..+++||+|+||... +. .+++++...+..+++. +.
T Consensus 260 ~rp~~p~v~~vGgi~~~~~~~~~l~~~l~~fl~~-~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~ 338 (507)
T PHA03392 260 NRPVPPSVQYLGGLHLHKKPPQPLDDYLEEFLNN-STNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGE 338 (507)
T ss_pred CCCCCCCeeeecccccCCCCCCCCCHHHHHHHhc-CCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCC
Confidence 34445678888886442 2 2345677777653 345799999999742 22 2344454445566554 32
Q ss_pred CCC-CCCCCeEEcCCCCCHH--HHHh--hcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe
Q 001947 256 SDS-QLPPNFIKLPKDAYTP--DFMA--ASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (992)
Q Consensus 256 ~~~-~l~~nv~v~~f~~~~p--~lL~--aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~ 330 (992)
..+ .+|+|+.+.+ |+| ++|+ .+++||||||.||++||+++|||+|++| .+.||+.||+++++.|+|+.++
T Consensus 339 ~~~~~~p~Nv~i~~---w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP--~~~DQ~~Na~rv~~~G~G~~l~ 413 (507)
T PHA03392 339 VEAINLPANVLTQK---WFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLP--MMGDQFYNTNKYVELGIGRALD 413 (507)
T ss_pred cCcccCCCceEEec---CCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECC--CCccHHHHHHHHHHcCcEEEec
Confidence 222 4789999886 555 7884 5999999999999999999999999999 5789999999999999999999
Q ss_pred cCCCChhhHHHHHHHHhhCCCCcc-----------CCCCHHHHHHHHHHHHHccCccccCCCC-ccchhhHh
Q 001947 331 RRDLLTGHWKPYLERAISLKPCYE-----------GGINGGEVAAHILQETAIGKNYASDKLS-GARRLRDA 390 (992)
Q Consensus 331 ~~~~~~~~l~~al~~ll~~~~~~~-----------~~~~G~~~aA~~I~~~~~~~~~~s~~~~-g~~~Lr~a 390 (992)
..+++.+.+.++|+++++++.+.. .+.++.++++++|+.+++ +. |+.+||.+
T Consensus 414 ~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~r--------~~~g~~~lr~~ 477 (507)
T PHA03392 414 TVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVIR--------NKHGNTSLKTK 477 (507)
T ss_pred cCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHh--------CCCCccccccc
Confidence 999999999999999998764311 456799999999998864 33 67888776
No 30
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism]
Probab=99.89 E-value=1.2e-21 Score=210.93 Aligned_cols=237 Identities=20% Similarity=0.251 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+++++|.+. +++|.++++||.++|||||||.+||.+.|+|++++.+++++++.+++...|+|++|+
T Consensus 58 ~n~~~~~~~~~~~~~~~~~--~~~i~i~k~IP~~rGLGSSaAsiVAal~aan~l~~~~L~~~~ll~~a~~~EgHpDNV-- 133 (299)
T COG0083 58 ENLVYQAALKFLEALGIEA--GVKIRIEKGIPLGRGLGSSAASIVAALAAANELAGLPLSKEELLQLALEIEGHPDNV-- 133 (299)
T ss_pred ceeHHHHHHHHHHHhCCCc--cEEEEEEcCCCCCCCCcHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCchH--
Confidence 3467778888888889874 499999999999999999999999999999999999999999999999999986544
Q ss_pred CccchhhhhccCcceEEEEee-cCccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCcc
Q 001947 689 GVMDQMASACGEANKLLAMVC-QPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQS 767 (992)
Q Consensus 689 G~~D~~~~~~Gg~~~~~~~~~-~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~ 767 (992)
++|++||. .+... .+.. ...+++|.+++++++..+.+-+|.
T Consensus 134 -----apa~lGG~---~l~~~~~~~~-~~~v~~~~~~~~v~~iP~~e~sT~----------------------------- 175 (299)
T COG0083 134 -----APAVLGGL---VLVEEESGII-SVKVPFPSDLKLVVVIPNFEVSTA----------------------------- 175 (299)
T ss_pred -----HHHhhCCE---EEEeecCCce-EEEccCCcceEEEEEeCCccccHH-----------------------------
Confidence 48999993 33322 2222 246677789999999654433321
Q ss_pred CCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccc
Q 001947 768 LPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPV 847 (992)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 847 (992)
.-| +.||+.++ .
T Consensus 176 ---------------------------~aR------------~vLP~~~~-----------------------------~ 187 (299)
T COG0083 176 ---------------------------EAR------------KVLPKSYS-----------------------------R 187 (299)
T ss_pred ---------------------------HHH------------HhccccCC-----------------------------H
Confidence 111 45776542 4
Q ss_pred cccchhhhHHHHHHHHHhccCChhHHHHHHHHHHH-hhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceee
Q 001947 848 CHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKIT 926 (992)
Q Consensus 848 ~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~-sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Gaklt 926 (992)
+.+|....|+.-+..+|.++ |.+.+..+|.+ -|+.||.- ..|+++++.+.+.+ .|+||+-|+
T Consensus 188 ~daV~n~s~~a~lv~al~~~----~~~l~~~~~~D~ihepyR~~--L~P~~~~v~~~a~~-----------~gA~g~~lS 250 (299)
T COG0083 188 KDAVFNLSRAALLVAALLEG----DPELLRAMMKDVIHEPYRAK--LVPGYAEVREAALE-----------AGALGATLS 250 (299)
T ss_pred HHHHHHHHHHHHHHHHHHcC----CHHHHHHHhccccchhhhhh--hCccHHHHHHHHhh-----------CCceEEEEe
Confidence 56778888999999999997 77777777776 59999995 57999999988887 799999999
Q ss_pred ccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCceeE
Q 001947 927 GGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGKFG 977 (992)
Q Consensus 927 GaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~~~ 977 (992)
|+| .|++++.++. +. +.+.++.+.++.+ +....++.+ .++|+..++
T Consensus 251 GAG--PTi~al~~~~-~~-e~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~~v~ 298 (299)
T COG0083 251 GAG--PTVFALADES-DA-EKAAALLEELYEQ-GIKGRVHILALDSDGARVVE 298 (299)
T ss_pred cCC--CeEEEEeccc-hh-hHHHHHHHHHHHh-CCcceEEEEeecCCcceEec
Confidence 999 9999998876 43 3444555555544 666777776 688877653
No 31
>PLN02451 homoserine kinase
Probab=99.89 E-value=7.3e-22 Score=223.83 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..++++.|.+. .|++|.|.++||+|+|||||||+++|++.|++.++|.+++++||++++.++|..++|..
T Consensus 114 ~Nlv~~a~~~~~~~~g~~~-~gv~I~i~k~IP~g~GLGSSaA~avA~l~aln~l~g~~ls~~eL~~la~~~E~~v~g~h- 191 (370)
T PLN02451 114 RNCAGIAAIATMKLLGIRS-VGLSLSLHKGLPLGSGLGSSAASAAAAAVAVNELFGSPLGKDDLVLAGLESEAKVSGYH- 191 (370)
T ss_pred cCcHHHHHHHHHHHcCCCC-CCEEEEEeCCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhchhcCCC-
Confidence 5777778888888888653 69999999999999999999999999999999999999999999999999999888863
Q ss_pred Cccchhh-hhccCcceEEEEe-ecCccceeeecCC--CCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccC
Q 001947 689 GVMDQMA-SACGEANKLLAMV-CQPAELLGVVEIP--SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGML 764 (992)
Q Consensus 689 G~~D~~~-~~~Gg~~~~~~~~-~~~~~~~~~v~~p--~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l 764 (992)
+||++ +++||. ++.. ..+.+. ..+++| +++.||+++++...+|... .
T Consensus 192 --~Dnva~a~~GG~---v~~~~~~~~~~-~~~~~p~~~~~~~Vlv~P~~~~sT~~a---------------r-------- 242 (370)
T PLN02451 192 --ADNIAPALMGGF---VLIRSYEPLHL-IPLRFPSAKDLFFVLVSPDFEAPTKKM---------------R-------- 242 (370)
T ss_pred --ccchhHhhcCCE---EEEEecCCCeE-EEeecCCCCCeEEEEEcCCCCccHHHH---------------H--------
Confidence 79985 799984 3433 233232 345555 6799999988776655320 0
Q ss_pred CccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccc
Q 001947 765 PQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVR 844 (992)
Q Consensus 765 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 844 (992)
+.+|+.+.
T Consensus 243 ---------------------------------------------~~lp~~~~--------------------------- 250 (370)
T PLN02451 243 ---------------------------------------------AALPKEIP--------------------------- 250 (370)
T ss_pred ---------------------------------------------HHHhhhcc---------------------------
Confidence 01111000
Q ss_pred ccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHh--hhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCccc
Q 001947 845 APVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQC--HYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFG 922 (992)
Q Consensus 845 ~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~s--H~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~G 922 (992)
+ ...+....|+.....+|.++ |++.+|++|+.. |+.++.- ++|+++++++.+++ .|++|
T Consensus 251 -~-~~~v~~~~~~~~l~~al~~~----d~~~l~~~m~nD~~~e~~r~~--~~P~l~~l~~~~~~-----------~GA~g 311 (370)
T PLN02451 251 -M-KHHVWNCSQAAALVAAILQG----DAVLLGEALSSDKIVEPTRAP--LIPGMEAVKKAALE-----------AGAYG 311 (370)
T ss_pred -h-hhHHHHHHHHHHHHHHHHcC----CHHHHHHHHHHHHHhHHHHhh--hCccHHHHHHHHHH-----------CCCeE
Confidence 0 01122234555667778776 999999999865 7777654 89999999999987 69999
Q ss_pred ceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCce
Q 001947 923 AKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGK 975 (992)
Q Consensus 923 akltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~ 975 (992)
++|||+| .|++++.++...++++.+++++.|++..+..+.+++. ...|++.
T Consensus 312 a~mSGSG--ptvfal~~~~~~a~~i~~~l~~~~~~~~~~~~~~~~~~~d~~Ga~v 364 (370)
T PLN02451 312 CTISGAG--PTAVAVIDDEEKGEEVGERMVEAFRKAGNLKATASVKKLDRVGARL 364 (370)
T ss_pred EEEEccc--hheEEEEcCHHHHHHHHHHHHHHHHHhcCCCceEEEeccCCCCeEE
Confidence 9999988 7888887654334677888888887666677888876 5678754
No 32
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase. Members of this family of GHMP kinases were previously designated as conserved hypothetical protein YchB or as isopentenyl monophosphate kinase. It is now known, in tomato and E. coli, to encode 4-diphosphocytidyl-2C-methyl-D-erythritol kinase, an enzyme of the deoxyxylulose phosphate pathway of terpenoid biosynthesis.
Probab=99.89 E-value=4.4e-22 Score=220.06 Aligned_cols=172 Identities=15% Similarity=0.153 Sum_probs=129.8
Q ss_pred EEEEcCcccccccccccc-CCCe----eeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDVMGGIADY-SGSL----VLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy-~gg~----vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
++++|||||||+|+|++| .+|+ +++++|+++.++.+.++++.++ .+.+.
T Consensus 2 ~~~~apaKiNL~l~i~~~r~dGyH~l~sl~~~i~l~d~v~i~~~~~~~i---------------------~~~~~----- 55 (293)
T TIGR00154 2 HVFPSPAKLNLFLYITGKRPDGYHELQTLMQFLDLGDKIIISVRSDDDI---------------------RLLKG----- 55 (293)
T ss_pred ceEeecccEEEEEecCCcCCCCCcceEEEEEEeccCcEEEEEECCCCcE---------------------EEeeC-----
Confidence 357899999999999987 6666 9999999999999988765432 22211
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCC--CCCCEEEEEEeCCCCCCCCchHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVR--FEDSISMLVSSAVPEGKGVSSSA 649 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~--~~~g~~i~i~s~iP~g~GLgSSA 649 (992)
.+ ++ +.. .||+++++..+.+..+.+ ...|++|.|.++||.++||||||
T Consensus 56 ----~~--~~----------------------~~~--~nlv~~a~~~l~~~~~~~~~~~~~~~i~i~~~iP~~aGLGsss 105 (293)
T TIGR00154 56 ----DF--DV----------------------PLE--ENLIYRAAQLLKNFANSKIKSLDGANIEIDKNIPMGAGLGGGS 105 (293)
T ss_pred ----CC--CC----------------------CCC--CcHHHHHHHHHHHHhcccccCCCCeEEEEeccCCCCCCcchhH
Confidence 00 00 011 289999998877666631 12699999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEE
Q 001947 650 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGI 729 (992)
Q Consensus 650 A~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~ 729 (992)
|.++|++.+++.+++.++++++++++|.++| .|...+++||. .+..... +...+++.++++.++++
T Consensus 106 a~aaa~l~al~~~~~~~l~~~~l~~la~~lg----------~Dv~~~~~gg~---~~~~g~g-e~~~~l~~~~~~~~vl~ 171 (293)
T TIGR00154 106 SDAATVLVGLNQLWQLGLSLEELAELGLTLG----------ADVPFFVSGHA---AFATGVG-EIITPFEDPPEKWVVIA 171 (293)
T ss_pred HHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcceEEECCe---EEEEecC-cEEEECCCCCCcEEEEE
Confidence 9999999999999999999999999999874 36678889984 3333333 22244544567789999
Q ss_pred eCCCccccC
Q 001947 730 DSGIRHSVG 738 (992)
Q Consensus 730 dsgi~~~~~ 738 (992)
++++.-+|.
T Consensus 172 ~p~~~~sT~ 180 (293)
T TIGR00154 172 KPHVSISTP 180 (293)
T ss_pred cCCCCcChH
Confidence 888776664
No 33
>PLN02208 glycosyltransferase family protein
Probab=99.88 E-value=1.8e-20 Score=217.80 Aligned_cols=321 Identities=12% Similarity=0.127 Sum_probs=191.8
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc--ccccccCCCceeeeeeccc--CCcccccccccChHHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF--VFTSEIQSPRLFIRKVLLD--CGAVQADALTVDRLASLEKYSE 97 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~--~~~~~i~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~ 97 (992)
++.++.||++|.+.||+.|..+|++|+|++..... +.......+.+.+...... .|+........+.. .....
T Consensus 10 ~P~paqGHi~P~l~LAk~La~~G~~VT~vtt~~~~~~i~~~~a~~~~i~~~~l~~p~~dgLp~g~~~~~~l~---~~l~~ 86 (442)
T PLN02208 10 FPWFAFGHMIPFLHLANKLAEKGHRVTFLLPKKAQKQLEHHNLFPDSIVFHPLTIPPVNGLPAGAETTSDIP---ISMDN 86 (442)
T ss_pred ecCccccHHHHHHHHHHHHHhCCCEEEEEeccchhhhhhcccCCCCceEEEEeCCCCccCCCCCcccccchh---HHHHH
Confidence 68899999999999999999999999999864311 1010000011222221111 12211000000110 01111
Q ss_pred HhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCc-hhHHHHHH--------Hhhhcc------
Q 001947 98 TAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS-WDFIYAEY--------VMAAGH------ 162 (992)
Q Consensus 98 ~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~-~~~~~~~~--------~~~~~~------ 162 (992)
.+............+++++.+||+||+|+.+|+..+|+.+|||.+.+...+ +...+..+ ++..+.
T Consensus 87 ~~~~~~~~~~~~l~~~L~~~~~~cVV~D~~~wa~~vA~e~giP~~~f~~~~a~~~~~~~~~~~~~~~~~pglp~~~~~~~ 166 (442)
T PLN02208 87 LLSEALDLTRDQVEAAVRALRPDLIFFDFAQWIPEMAKEHMIKSVSYIIVSATTIAHTHVPGGKLGVPPPGYPSSKVLFR 166 (442)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEECCcHhHHHHHHHhCCCEEEEEhhhHHHHHHHccCccccCCCCCCCCCcccccC
Confidence 111123334445566778889999999988888999999999998773221 11011000 000000
Q ss_pred c------------hHHHHHHHHhhccccceeeecCCCC---------CCCCCCceeecCcccccC---CCChHHHHHHhC
Q 001947 163 H------------HRSIVWQIAEDYSHCEFLIRLPGYC---------PMPAFRDVIDVPLVVRRL---HKSRKEVRKELG 218 (992)
Q Consensus 163 ~------------~~~i~~~l~~~y~~~d~ll~~~~~~---------~~p~~~~v~~vp~~~~~~---~~~r~e~r~~l~ 218 (992)
. +..+.+++...+..++.++.-++.. ..+..+++..|||+.... .....++.+|++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~~~~~~~~~~~~wLd 246 (442)
T PLN02208 167 ENDAHALATLSIFYKRLYHQITTGLKSCDVIALRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPDTSKPLEEQWSHFLS 246 (442)
T ss_pred HHHcCcccccchHHHHHHHHHHhhhccCCEEEEECHHHHHHHHHHHHHhhcCCCEEEEeecccCcCCCCCCHHHHHHHHh
Confidence 0 0111111112233344333222210 111124688888875421 123567889998
Q ss_pred CCCCCcEEEEEcCCCCC-h-hhHHH---hh--CCCCcEEEEeCC-C--C--CCCC---------CCeEEcCCCCCHH--H
Q 001947 219 IEDDVKLLILNFGGQPA-G-WKLKE---EY--LPSGWKCLVCGA-S--D--SQLP---------PNFIKLPKDAYTP--D 275 (992)
Q Consensus 219 ~~~d~~~Vlvs~Gg~~~-~-~~ll~---~l--~~~~~~~Vv~G~-~--~--~~l~---------~nv~v~~f~~~~p--~ 275 (992)
-.+++.+|||||||... . .++.+ .+ ....+.+|+.-. . . ..+| .|+.+.+ |+| +
T Consensus 247 ~~~~~sVvyvSfGS~~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~---W~PQ~~ 323 (442)
T PLN02208 247 GFPPKSVVFCSLGSQIILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGG---WVQQPL 323 (442)
T ss_pred cCCCCcEEEEeccccccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeec---cCCHHH
Confidence 77778999999999876 2 22333 22 334556665411 1 1 1155 4555544 666 7
Q ss_pred HHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecCC---CChhhHHHHHHHHhhC
Q 001947 276 FMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRD---LLTGHWKPYLERAISL 349 (992)
Q Consensus 276 lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~-~G~Gi~v~~~~---~~~~~l~~al~~ll~~ 349 (992)
+|++ ..+||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+...+ ++.+.+..+|++++++
T Consensus 324 iL~H~~v~~FvtHcG~nS~~Eai~~GVP~l~~P--~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~ 401 (442)
T PLN02208 324 ILDHPSIGCFVNHCGPGTIWESLVSDCQMVLIP--FLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDK 401 (442)
T ss_pred HhcCCccCeEEccCCchHHHHHHHcCCCEEecC--cchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcC
Confidence 8876 457999999999999999999999999 68899999998775 89999997654 7889999999999965
Q ss_pred C
Q 001947 350 K 350 (992)
Q Consensus 350 ~ 350 (992)
+
T Consensus 402 ~ 402 (442)
T PLN02208 402 D 402 (442)
T ss_pred C
Confidence 4
No 34
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch. This enzyme is part of the mevalonate pathway, one of two alternative pathways for the biosynthesis of IPP. In an example of nonorthologous gene displacement, two different types of phosphomevalonate kinase are found - the animal type and this ERG8 type. This model represents plant and fungal forms of the ERG8 type of phosphomevalonate kinase.
Probab=99.87 E-value=3.2e-20 Score=212.52 Aligned_cols=358 Identities=17% Similarity=0.189 Sum_probs=211.8
Q ss_pred EEcCccccccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 001947 499 ARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 577 (992)
Q Consensus 499 ~~APGRv~L~GeH~dy~-gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 577 (992)
++||||+-|.||.++.. |..++-.|++.++|+.+++..+.. ..+ ...+.|.|.. |.+.. +
T Consensus 2 ~sAPGKlliAGgYlVLep~y~aiVval~~r~~a~v~~~~~~~-~~~--------------~~~i~v~SpQ--f~~~~--~ 62 (454)
T TIGR01219 2 ASAPGKVLMAGGYLVLDKPYAGLVLGLNARFYAIVKPINEEV-GAW--------------KWDVRVKSPQ--FSDRE--W 62 (454)
T ss_pred cccCceEEEecceEEecCCCcEEEEEecceEEEEEeeccccc-ccC--------------cceEEEeCCC--CCCCc--e
Confidence 68999999999999976 788899999999999998765321 111 1245666653 33221 2
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHh---CCC---CCCCEEEEEEeCC------------
Q 001947 578 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTEL---GVR---FEDSISMLVSSAV------------ 639 (992)
Q Consensus 578 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~---g~~---~~~g~~i~i~s~i------------ 639 (992)
.+..+. +...+...... ....... ..||..++...++.. +.. + .+++|+|.|+.
T Consensus 63 ~y~~~~---~~~~~~~~~~~---~~~~~~~-n~fv~~ai~~~~~y~~~~~~~~~~l-~~~~itI~sd~d~ySq~~~~~~~ 134 (454)
T TIGR01219 63 LYKISL---NHLTLQSVSAS---DSRNPFV-NPFIQYAIAAVHLYFDKESLHKLLL-QGLDITILGDNAYYSQPESLGTL 134 (454)
T ss_pred EEEEec---CCccceeeccc---ccCCCCC-ChHHHHHHHHHHHHHHhcccccccc-CceEEEEEecCCcccccchhccc
Confidence 332211 00000000000 0001112 346666665544332 222 3 58999998877
Q ss_pred -------CC--------CCCCchHHHHHHHHHHHHHHHhCCCC-------------CHHHHHHHHHHHhccccCC-CCCc
Q 001947 640 -------PE--------GKGVSSSASVEVASMSAIAAAHGLNI-------------HPRDLALLCQKVENHIVGA-PCGV 690 (992)
Q Consensus 640 -------P~--------g~GLgSSAA~~va~~~al~~~~~~~l-------------~~~el~~la~~~E~~~~G~-~~G~ 690 (992)
+. +.|||||||++||++.||..+++..+ +++.+.++|+.+|...+|+ +||
T Consensus 135 ~~~~~f~~~~~~~~e~~K~GLGSSAAvtVa~v~ALl~~~~~~~~~~~~~~~~~~~~~~~~i~kLA~~ah~~~qGk~GSG- 213 (454)
T TIGR01219 135 APFASITFNAAEKPEVAKTGLGSSAAMTTALVAALLHYLGVVDLSDPDKEGKFGCSDLDVIHNLAQTAHCLAQGKVGSG- 213 (454)
T ss_pred ccccccccccccCCCccccCccHHHHHHHHHHHHHHHHhCCcccccccccccccccCHHHHHHHHHHHHHhhcCCCCCc-
Confidence 22 68999999999999999999999877 7899999999999999995 688
Q ss_pred cchhhhhccCcceEEEEeecCc----------------------------cceeeecCCCCeEEEEEeCCCccccCCCCC
Q 001947 691 MDQMASACGEANKLLAMVCQPA----------------------------ELLGVVEIPSHIRFWGIDSGIRHSVGGADY 742 (992)
Q Consensus 691 ~D~~~~~~Gg~~~~~~~~~~~~----------------------------~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y 742 (992)
.|.++++||| +++..+.+. ++ +.+.+|+++++++.|||.+++|..
T Consensus 214 ~DvAaavyGg---i~Y~rfd~~~l~~~~~~~~~~~~~~~L~~~v~~~W~~~i-~~l~lP~~l~Llvgdtg~~ssT~~--- 286 (454)
T TIGR01219 214 FDVSAAVYGS---QRYRRFSPELISFLQVAITGLPLNEVLGTIVKGKWDNKR-TEFSLPPLMNLFMGDPGGGSSTPS--- 286 (454)
T ss_pred hhhhhhhcCc---eEEEecChhhhhhhhccccccchhhhHHHHhccCCCCce-eeccCCCCCEEEEEcCCCCcCcHH---
Confidence 5999999999 344444331 11 356678899999999999998863
Q ss_pred cchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHh--hhhHHHhcCChHHHHHHHhhcCCccchhhh
Q 001947 743 GSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAE--ASLDYLCNLSPHRFEALYAKNIPESIVGEE 820 (992)
Q Consensus 743 ~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~ 820 (992)
||+.+.+ +.. . +.+.-+..++.+... .-...|.. |
T Consensus 287 ------------lV~~V~~-~~~-~--------~p~~s~~i~~~l~~aN~~~~~~l~~-------------l-------- 323 (454)
T TIGR01219 287 ------------MVGKVKK-WQM-S--------DPEESRENWQNLSDANLELETKLND-------------L-------- 323 (454)
T ss_pred ------------HHHHHHH-HHH-H--------CHHHHHHHHHHHHHHHHHHHHHHHh-------------h--------
Confidence 5555421 000 0 000001111111100 00001110 0
Q ss_pred hhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhcc----CChhHHHHHHHHHHHhhhhhhhc------
Q 001947 821 FSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAA----ASDDQLTSLGELLYQCHYSYSAC------ 890 (992)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~----~~~~d~~~lG~lm~~sH~slr~~------ 890 (992)
.+...++++ .| ....+.|..+ ....++..+.+.|.++-..||.+
T Consensus 324 -~~~~~~~~~---------~y----------------~~~~~~l~~~~~~~~~~~~~~~i~~~i~~~R~~Lr~~~~~sgv 377 (454)
T TIGR01219 324 -SKLAKDHWD---------VY----------------LRVIKVLTSEKCVLHATEELLEAREAMLRIRRLMRQITEEASV 377 (454)
T ss_pred -hhhhccccc---------hh----------------hhhhhhhccccchhcccccHHHHHHHHHHHHHHHHHhhHhcCC
Confidence 000000000 00 0011111110 00025666777777777777653
Q ss_pred CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEeecC
Q 001947 891 GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEGSS 970 (992)
Q Consensus 891 ~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~~~ 970 (992)
.+-.|++-+|++.+.++ +|++|||..|||+|-|+++|..++. +.++.+.++++ +.|..|--.....
T Consensus 378 ~IEp~~~t~Lld~~~~~----------~Gvl~a~vpGAGGgDa~~~l~~~~~---~~~~~~~~~W~-~~~V~pL~v~~~~ 443 (454)
T TIGR01219 378 DIEPESQTQLLDSTMSL----------EGVLLAGVPGAGGFDAIFAITLGDV---DSGTKLTQAWS-SHNVLALDVREAP 443 (454)
T ss_pred cccCHHHHHHHHHHhhc----------CCeeEeecCCCCccceEEEEecCCh---HHHHHHHHHHh-hCCEEEEeccccC
Confidence 34578888888888764 7999999999999999998876544 35677777764 4555553332244
Q ss_pred CCCc
Q 001947 971 PGAG 974 (992)
Q Consensus 971 ~Ga~ 974 (992)
.|.+
T Consensus 444 ~G~~ 447 (454)
T TIGR01219 444 HGVC 447 (454)
T ss_pred Cccc
Confidence 5544
No 35
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=99.87 E-value=6.9e-20 Score=195.68 Aligned_cols=335 Identities=21% Similarity=0.248 Sum_probs=205.7
Q ss_pred cEEEEEec-cCCCcccHHHHHHHHHHHHHC--CCcEEEEeCCC---CcccccccCCCceeeeee-cccCCcccccccccC
Q 001947 15 HLVFAYYV-TGHGFGHATRVVEVVRNLISA--GHDVHVVTGAP---DFVFTSEIQSPRLFIRKV-LLDCGAVQADALTVD 87 (992)
Q Consensus 15 ~~~Il~~v-~g~G~GHv~r~laLA~~L~~~--GheV~~~~~~~---~~~~~~~i~~~~~~~~~~-~~~~g~~~~~~~~~~ 87 (992)
+++|+||+ ...|.||+.||..||++|.+. |.+|+++++.+ .|.....+. .+..++. ..+.|.....-...+
T Consensus 9 ~~Ri~~Yshd~~GlGHlrR~~~Ia~aLv~d~~~~~Il~IsG~~~~~~F~~~~gVd--~V~LPsl~k~~~G~~~~~d~~~~ 86 (400)
T COG4671 9 RPRILFYSHDLLGLGHLRRALRIAHALVEDYLGFDILIISGGPPAGGFPGPAGVD--FVKLPSLIKGDNGEYGLVDLDGD 86 (400)
T ss_pred cceEEEEehhhccchHHHHHHHHHHHHhhcccCceEEEEeCCCccCCCCCcccCc--eEecCceEecCCCceeeeecCCC
Confidence 33444454 678999999999999999998 99999999875 333333321 2233332 122343321111222
Q ss_pred hHHHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHH------HHHH--cCCc-EEEEecCchhHHHHHHHh
Q 001947 88 RLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACR------AAAD--AGIR-SVCVTNFSWDFIYAEYVM 158 (992)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~------aA~~--~gIP-~v~is~~~~~~~~~~~~~ 158 (992)
+..+.++ +..++ ...++.+|||++|+|..|.++. .+.. .+-+ ++.+++.... ... ..
T Consensus 87 ----l~e~~~~----Rs~li---l~t~~~fkPDi~IVd~~P~Glr~EL~ptL~yl~~~~t~~vL~lr~i~D~--p~~-~~ 152 (400)
T COG4671 87 ----LEETKKL----RSQLI---LSTAETFKPDIFIVDKFPFGLRFELLPTLEYLKTTGTRLVLGLRSIRDI--PQE-LE 152 (400)
T ss_pred ----HHHHHHH----HHHHH---HHHHHhcCCCEEEEeccccchhhhhhHHHHHHhhcCCcceeehHhhhhc--hhh-hc
Confidence 2222221 22222 4456899999999999777643 2222 2322 3333332100 000 00
Q ss_pred hhccchHHHHHHHHhhccccceeee-cC-CCCCCCCC-------CceeecCccccc-CCCChHHHHHHhCCCCCCcEEEE
Q 001947 159 AAGHHHRSIVWQIAEDYSHCEFLIR-LP-GYCPMPAF-------RDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLIL 228 (992)
Q Consensus 159 ~~~~~~~~i~~~l~~~y~~~d~ll~-~~-~~~~~p~~-------~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlv 228 (992)
.+.........+...|.. .++. -| ++-+...| .+++++|.+.+. +...... ...+++..|+|
T Consensus 153 -~~w~~~~~~~~I~r~yD~--V~v~GdP~f~d~~~~~~~~~~i~~k~~ytG~vq~~~~~~~~p~-----~~~pE~~~Ilv 224 (400)
T COG4671 153 -ADWRRAETVRLINRFYDL--VLVYGDPDFYDPLTEFPFAPAIRAKMRYTGFVQRSLPHLPLPP-----HEAPEGFDILV 224 (400)
T ss_pred -cchhhhHHHHHHHHhheE--EEEecCccccChhhcCCccHhhhhheeEeEEeeccCcCCCCCC-----cCCCccceEEE
Confidence 000001122223333322 1111 11 11111111 235666665221 1100000 01145567999
Q ss_pred EcCCCCChhhHHHh-----hCCCCc---EEEEeCCCCCC---------CC--CCeEEcCCCCCHHHHHhhcCEEEecCCh
Q 001947 229 NFGGQPAGWKLKEE-----YLPSGW---KCLVCGASDSQ---------LP--PNFIKLPKDAYTPDFMAASDCMLGKIGY 289 (992)
Q Consensus 229 s~Gg~~~~~~ll~~-----l~~~~~---~~Vv~G~~~~~---------l~--~nv~v~~f~~~~p~lL~aaDlvIt~~G~ 289 (992)
+.||.+.+.++++. ...+++ -++++|+..++ .+ +++.++.|..++..+|..|+.+|+.+||
T Consensus 225 s~GGG~dG~eLi~~~l~A~~~l~~l~~~~~ivtGP~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~~ll~gA~~vVSm~GY 304 (400)
T COG4671 225 SVGGGADGAELIETALAAAQLLAGLNHKWLIVTGPFMPEAQRQKLLASAPKRPHISIFEFRNDFESLLAGARLVVSMGGY 304 (400)
T ss_pred ecCCChhhHHHHHHHHHHhhhCCCCCcceEEEeCCCCCHHHHHHHHHhcccCCCeEEEEhhhhHHHHHHhhheeeecccc
Confidence 99887777666552 111222 35678998764 24 7899999999988999999999999999
Q ss_pred hHHHHHHHcCCcEEEEeCC-CCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC--ccCCCCHHHHHHHH
Q 001947 290 GTVSEALAYKLPFVFVRRD-YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC--YEGGINGGEVAAHI 366 (992)
Q Consensus 290 ~Tv~Eal~~GvP~V~iP~~-~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~--~~~~~~G~~~aA~~ 366 (992)
||+||-+++|||.++||+. +..||..-|++++++|+.-++.++++++..++++|...+..+.. .....+|++.++.+
T Consensus 305 NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~La~al~~~l~~P~~~~~~L~L~G~~~~a~~ 384 (400)
T COG4671 305 NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQNLADALKAALARPSPSKPHLDLEGLEHIARI 384 (400)
T ss_pred hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHHHHHHHHhcccCCCCCccccCchhhHhHHHH
Confidence 9999999999999999975 34589999999999999999999999999999999999875433 23689999999999
Q ss_pred HHHHHcc
Q 001947 367 LQETAIG 373 (992)
Q Consensus 367 I~~~~~~ 373 (992)
|.+++..
T Consensus 385 l~e~L~~ 391 (400)
T COG4671 385 LAELLST 391 (400)
T ss_pred HHHHhhh
Confidence 9887643
No 36
>PLN00414 glycosyltransferase family protein
Probab=99.86 E-value=1.1e-19 Score=211.64 Aligned_cols=323 Identities=16% Similarity=0.170 Sum_probs=186.8
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-cccc-ccCCCceeeeeecc--cCCcccccccccChHHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTS-EIQSPRLFIRKVLL--DCGAVQADALTVDRLASLEKYSE 97 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~-~i~~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~ 97 (992)
++.++.||++|.+.||+.|..+|+.|+|++..... .... ....+.+.+..... ..|+........+..... ..
T Consensus 10 vPfpaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~i~~~~~~~~~i~~~~i~lP~~dGLP~g~e~~~~l~~~~---~~ 86 (446)
T PLN00414 10 YPWFGFGHMIPYLHLANKLAEKGHRVTFFLPKKAHKQLQPLNLFPDSIVFEPLTLPPVDGLPFGAETASDLPNST---KK 86 (446)
T ss_pred ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCchhhhhcccccCCCceEEEEecCCCcCCCCCcccccccchhhH---HH
Confidence 68899999999999999999999999999865311 0110 00001122211100 012211000000111100 11
Q ss_pred HhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCc-hh-HHH----HH--H-Hhhhcc------
Q 001947 98 TAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS-WD-FIY----AE--Y-VMAAGH------ 162 (992)
Q Consensus 98 ~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~-~~-~~~----~~--~-~~~~~~------ 162 (992)
.+......+.....++++..+||+||+|+.+|+..+|+.+|||.+.+...+ .. ..+ .. . .+..+.
T Consensus 87 ~~~~a~~~l~~~l~~~L~~~~p~cVV~D~~~wa~~vA~~lgIP~~~F~~~~a~~~~~~~~~~~~~~~~~pg~p~~~~~~~ 166 (446)
T PLN00414 87 PIFDAMDLLRDQIEAKVRALKPDLIFFDFVHWVPEMAKEFGIKSVNYQIISAACVAMVLAPRAELGFPPPDYPLSKVALR 166 (446)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEEECCchhHHHHHHHhCCCEEEEecHHHHHHHHHhCcHhhcCCCCCCCCCCcCcCc
Confidence 111112223334455677779999999998899999999999998873221 00 000 00 0 000000
Q ss_pred chH----H-------HHHHHHhhccccceeeecCCCCC-------CC-CC-CceeecCcccccCC-----CChHHHHHHh
Q 001947 163 HHR----S-------IVWQIAEDYSHCEFLIRLPGYCP-------MP-AF-RDVIDVPLVVRRLH-----KSRKEVRKEL 217 (992)
Q Consensus 163 ~~~----~-------i~~~l~~~y~~~d~ll~~~~~~~-------~p-~~-~~v~~vp~~~~~~~-----~~r~e~r~~l 217 (992)
..+ . ......+....++-++.-++... +. .. +.+..|||+..... ....++.+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~WL 246 (446)
T PLN00414 167 GHDANVCSLFANSHELFGLITKGLKNCDVVSIRTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQNKSGKPLEDRWNHWL 246 (446)
T ss_pred hhhcccchhhcccHHHHHHHHHhhccCCEEEEechHHHHHHHHHHHHHhcCCCeEEEcccCCCcccccCcccHHHHHHHH
Confidence 000 0 00001112223333332222110 00 11 34778888753211 1124577899
Q ss_pred CCCCCCcEEEEEcCCCCCh--hhHHH---hhCC--CCcEEEEe---CCCC-C-CCCCCeEEc----CCC--CCHH--HHH
Q 001947 218 GIEDDVKLLILNFGGQPAG--WKLKE---EYLP--SGWKCLVC---GASD-S-QLPPNFIKL----PKD--AYTP--DFM 277 (992)
Q Consensus 218 ~~~~d~~~Vlvs~Gg~~~~--~~ll~---~l~~--~~~~~Vv~---G~~~-~-~l~~nv~v~----~f~--~~~p--~lL 277 (992)
+-.+++++|||||||.... .++.+ .|.. ..+.+|+. |... . .+|+|+... +.+ .|+| ++|
T Consensus 247 D~q~~~sVvyvsfGS~~~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL 326 (446)
T PLN00414 247 NGFEPGSVVFCAFGTQFFFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLIL 326 (446)
T ss_pred hcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHh
Confidence 9888899999999998763 23333 3433 34344443 2111 1 156555321 111 4667 788
Q ss_pred hhc--CEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecC---CCChhhHHHHHHHHhhC
Q 001947 278 AAS--DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHWKPYLERAISL 349 (992)
Q Consensus 278 ~aa--DlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~~G~Gi~v~~~---~~~~~~l~~al~~ll~~ 349 (992)
+++ ++||||||+||++|++++|+|||++| .+.||+.||++++ +.|+|+.+..+ .++.+.+..++++++.+
T Consensus 327 ~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~ 402 (446)
T PLN00414 327 SHPSVGCFVNHCGFGSMWESLVSDCQIVFIP--QLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDK 402 (446)
T ss_pred cCCccceEEecCchhHHHHHHHcCCCEEecC--cccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcC
Confidence 766 88999999999999999999999999 6889999999995 68999999643 37889999999999964
No 37
>PLN02210 UDP-glucosyl transferase
Probab=99.86 E-value=2.2e-19 Score=210.07 Aligned_cols=312 Identities=15% Similarity=0.162 Sum_probs=183.6
Q ss_pred ccCCCcccHHHHHHHHHH--HHHCCCcEEEEeCCCCc-cccccc-CCCceeeeeecccCCcccccccccChHHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRN--LISAGHDVHVVTGAPDF-VFTSEI-QSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~--L~~~GheV~~~~~~~~~-~~~~~i-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (992)
++.++.||++|.+.||+. |..+|+.|+|++..... .....- ....+.+... ..|+.. ....+. ..+..
T Consensus 14 ~P~pa~GHi~P~l~La~~L~L~~~G~~VT~v~t~~~~~~~~~~~~~~~~~~~~~~--~~glp~--~~~~~~----~~~~~ 85 (456)
T PLN02210 14 VTLAFQGHINPMLKLAKHLSLSSKNLHFTLATTEQARDLLSTVEKPRRPVDLVFF--SDGLPK--DDPRAP----ETLLK 85 (456)
T ss_pred eCCcccccHHHHHHHHHHHHhhcCCcEEEEEeccchhhhhccccCCCCceEEEEC--CCCCCC--CcccCH----HHHHH
Confidence 688999999999999999 55899999999775311 111100 0112222221 112221 111111 11221
Q ss_pred HhhccHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCc-hhH-HHHHH------------------
Q 001947 98 TAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WDF-IYAEY------------------ 156 (992)
Q Consensus 98 ~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~~-~~~~~------------------ 156 (992)
.+ .........++|++.+||+||+|. .+|+..+|+.+|||.+.+.... ... .+..+
T Consensus 86 ~~---~~~~~~~l~~~l~~~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (456)
T PLN02210 86 SL---NKVGAKNLSKIIEEKRYSCIISSPFTPWVPAVAAAHNIPCAILWIQACGAYSVYYRYYMKTNSFPDLEDLNQTVE 162 (456)
T ss_pred HH---HHhhhHHHHHHHhcCCCcEEEECCcchhHHHHHHHhCCCEEEEecccHHHHHHHHhhhhccCCCCcccccCCeee
Confidence 11 111223345667777899999997 8899999999999998762211 100 00000
Q ss_pred Hhhhcc-ch---------------HHHHHHHHhhccccceeeecCCCCC-------CCCCCceeecCccccc----C-C-
Q 001947 157 VMAAGH-HH---------------RSIVWQIAEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR----L-H- 207 (992)
Q Consensus 157 ~~~~~~-~~---------------~~i~~~l~~~y~~~d~ll~~~~~~~-------~p~~~~v~~vp~~~~~----~-~- 207 (992)
++..+. .. ......+......++.++.-++... +....++..|||.... . .
T Consensus 163 ~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~v~~VGPl~~~~~~~~~~~ 242 (456)
T PLN02210 163 LPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELESEIIESMADLKPVIPIGPLVSPFLLGDDEE 242 (456)
T ss_pred CCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhHHHHHHHhhcCCEEEEcccCchhhcCcccc
Confidence 000000 00 0011111112222333332222111 0112357788887421 0 0
Q ss_pred -----------CChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEEEE-eCCCC----CC-----C-
Q 001947 208 -----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLV-CGASD----SQ-----L- 260 (992)
Q Consensus 208 -----------~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~Vv-~G~~~----~~-----l- 260 (992)
....++.+|++-.+++++|||+|||.... . ++...|...++.|++ .+... .. .
T Consensus 243 ~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~e~a~~l~~~~~~flw~~~~~~~~~~~~~~~~~~~ 322 (456)
T PLN02210 243 ETLDGKNLDMCKSDDCCMEWLDKQARSSVVYISFGSMLESLENQVETIAKALKNRGVPFLWVIRPKEKAQNVQVLQEMVK 322 (456)
T ss_pred cccccccccccccchHHHHHHhCCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEeCCccccchhhHHhhcc
Confidence 01234567887667788999999998652 2 333345555665443 33221 11 1
Q ss_pred CCCeEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecC---
Q 001947 261 PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRR--- 332 (992)
Q Consensus 261 ~~nv~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~-~G~Gi~v~~~--- 332 (992)
+++..+.+ |+| ++|++++ +||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+...
T Consensus 323 ~~~g~v~~---w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~v~~P--~~~DQ~~na~~~~~~~g~G~~l~~~~~~ 397 (456)
T PLN02210 323 EGQGVVLE---WSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPVVAYP--SWTDQPIDARLLVDVFGIGVRMRNDAVD 397 (456)
T ss_pred CCCeEEEe---cCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCEEecc--cccccHHHHHHHHHHhCeEEEEeccccC
Confidence 24444554 666 6888876 9999999999999999999999999 68899999999987 8999998642
Q ss_pred -CCChhhHHHHHHHHhhC
Q 001947 333 -DLLTGHWKPYLERAISL 349 (992)
Q Consensus 333 -~~~~~~l~~al~~ll~~ 349 (992)
.++.+++.+++++++.+
T Consensus 398 ~~~~~~~l~~av~~~m~~ 415 (456)
T PLN02210 398 GELKVEEVERCIEAVTEG 415 (456)
T ss_pred CcCCHHHHHHHHHHHhcC
Confidence 47889999999999964
No 38
>PLN03007 UDP-glucosyltransferase family protein
Probab=99.85 E-value=1.5e-19 Score=213.66 Aligned_cols=328 Identities=14% Similarity=0.166 Sum_probs=182.1
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC-----CCc--eeeeeeccc---CCcccc-cc
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-----SPR--LFIRKVLLD---CGAVQA-DA 83 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~-----~~~--~~~~~~~~~---~g~~~~-~~ 83 (992)
.+|++ ++.+|.||++|.+.||+.|..+|++|+|++..... ....... .+. +.+...... .|+... ..
T Consensus 6 ~hVvl-vp~pa~GHi~P~L~LAk~L~~rG~~VT~vtt~~~~~~i~~~~a~~~~~~~~~~~~~~~~~~p~~~~glP~g~e~ 84 (482)
T PLN03007 6 LHILF-FPFMAHGHMIPTLDMAKLFSSRGAKSTILTTPLNAKIFEKPIEAFKNLNPGLEIDIQIFNFPCVELGLPEGCEN 84 (482)
T ss_pred cEEEE-ECCCccccHHHHHHHHHHHHhCCCEEEEEECCCchhhhhhhhhhhcccCCCCcceEEEeeCCCCcCCCCCCccc
Confidence 34433 68899999999999999999999999999875311 1111100 000 011111000 121100 00
Q ss_pred cc----cChHHHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCc-hh----H-H
Q 001947 84 LT----VDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD----F-I 152 (992)
Q Consensus 84 ~~----~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~----~-~ 152 (992)
.. .+.... ..+...+......+.....+++++.+||+||+|. .+|+..+|+.+|||.+.+...+ +. . .
T Consensus 85 ~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~IV~D~~~~w~~~vA~~lgIP~v~f~~~~a~~~~~~~~~ 163 (482)
T PLN03007 85 VDFITSNNNDDS-GDLFLKFLFSTKYFKDQLEKLLETTRPDCLVADMFFPWATEAAEKFGVPRLVFHGTGYFSLCASYCI 163 (482)
T ss_pred ccccccccccch-HHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEECCcchhHHHHHHHhCCCeEEeecccHHHHHHHHHH
Confidence 00 000000 0111111112233444556677778999999997 8899999999999998772211 00 0 0
Q ss_pred HHHH-------------Hhhhcc-------------chHHHHH---HHHhhccccceeeecCCCC------C-CCCC--C
Q 001947 153 YAEY-------------VMAAGH-------------HHRSIVW---QIAEDYSHCEFLIRLPGYC------P-MPAF--R 194 (992)
Q Consensus 153 ~~~~-------------~~~~~~-------------~~~~i~~---~l~~~y~~~d~ll~~~~~~------~-~p~~--~ 194 (992)
+..+ ++..+. ....... .+.+....++.++.-++.. . ++.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~Nt~~~le~~~~~~~~~~~~~ 243 (482)
T PLN03007 164 RVHKPQKKVASSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGVLVNSFYELESAYADFYKSFVAK 243 (482)
T ss_pred HhcccccccCCCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEEEEECHHHHHHHHHHHHHhccCC
Confidence 0000 000000 0000011 1111112222222211100 0 1111 2
Q ss_pred ceeecCcccccC-------------CCChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEEEE-eCC
Q 001947 195 DVIDVPLVVRRL-------------HKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLV-CGA 255 (992)
Q Consensus 195 ~v~~vp~~~~~~-------------~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~Vv-~G~ 255 (992)
.+..|||+.... .....++.+|+...+++++|||||||.... .++...|...++.|++ .+.
T Consensus 244 ~~~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~~~flw~~~~ 323 (482)
T PLN03007 244 RAWHIGPLSLYNRGFEEKAERGKKANIDEQECLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSGQNFIWVVRK 323 (482)
T ss_pred CEEEEccccccccccccccccCCccccchhHHHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCCCCEEEEEec
Confidence 466788853210 012345778887777788999999998652 2334445444554443 232
Q ss_pred C-C--C---CC---------CCCeEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHH
Q 001947 256 S-D--S---QL---------PPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFL 316 (992)
Q Consensus 256 ~-~--~---~l---------~~nv~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~N 316 (992)
. . . .+ +.|+++.+ |+| ++|++++ +||||||+||++|++++|||||++| .+.||+.|
T Consensus 324 ~~~~~~~~~~lp~~~~~r~~~~g~~v~~---w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GVP~v~~P--~~~DQ~~n 398 (482)
T PLN03007 324 NENQGEKEEWLPEGFEERTKGKGLIIRG---WAPQVLILDHQATGGFVTHCGWNSLLEGVAAGLPMVTWP--VGAEQFYN 398 (482)
T ss_pred CCcccchhhcCCHHHHHHhccCCEEEec---CCCHHHHhccCccceeeecCcchHHHHHHHcCCCeeecc--chhhhhhh
Confidence 1 1 0 13 34667765 555 7888865 5999999999999999999999999 68899999
Q ss_pred HHHHHH-cCcEEEE--------ecCCCChhhHHHHHHHHhhCC
Q 001947 317 RNMLEF-YQGGVEM--------IRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 317 A~~le~-~G~Gi~v--------~~~~~~~~~l~~al~~ll~~~ 350 (992)
|+++++ .++|+.+ +.+.++.+.+.++|++++.++
T Consensus 399 a~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 399 EKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred HHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCc
Confidence 998863 3444443 334578899999999999753
No 39
>PLN02448 UDP-glycosyltransferase family protein
Probab=99.84 E-value=5.9e-19 Score=207.58 Aligned_cols=353 Identities=14% Similarity=0.113 Sum_probs=197.1
Q ss_pred cEEEEEeccCCCcccHHHHHHHHHHHHHC--CCcEEEEeCCCCc-ccccccCCCceeeeeecccCCcccccccccChHHH
Q 001947 15 HLVFAYYVTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDF-VFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLAS 91 (992)
Q Consensus 15 ~~~Il~~v~g~G~GHv~r~laLA~~L~~~--GheV~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (992)
+.+|++ ++.++.||++|.+.||++|..+ ||.|+|++..... ........+.+.+.... .+.........+....
T Consensus 10 ~~hVvl-vp~pa~GHi~P~l~LA~~L~~~~~G~~VT~~~t~~~~~~i~~~~~~~gi~fv~lp--~~~p~~~~~~~~~~~~ 86 (459)
T PLN02448 10 SCHVVA-MPYPGRGHINPMMNLCKLLASRKPDILITFVVTEEWLGLIGSDPKPDNIRFATIP--NVIPSELVRAADFPGF 86 (459)
T ss_pred CcEEEE-ECCcccccHHHHHHHHHHHHcCCCCcEEEEEeCCchHhHhhccCCCCCEEEEECC--CCCCCccccccCHHHH
Confidence 345543 5778899999999999999999 9999999775311 11111111233443321 1111000001122111
Q ss_pred HHHHHHHhhccHHHhHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCch-h-HHHHHH----------
Q 001947 92 LEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW-D-FIYAEY---------- 156 (992)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~L~~--~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~-~-~~~~~~---------- 156 (992)
+..+. ........+++++ .++|+||+|. .+|+..+|+.+|||.+.+..... . ..+..+
T Consensus 87 ~~~~~-------~~~~~~~~~~l~~~~~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~ 159 (459)
T PLN02448 87 LEAVM-------TKMEAPFEQLLDRLEPPVTAIVADTYLFWAVGVGNRRNIPVASLWTMSATFFSVFYHFDLLPQNGHFP 159 (459)
T ss_pred HHHHH-------HHhHHHHHHHHHhcCCCcEEEEECCccHHHHHHHHHhCCCeEEEEhHHHHHHHHHHHhhhhhhccCCC
Confidence 11111 1122223444554 3679999997 88999999999999988733220 0 000000
Q ss_pred -------------Hhhhcc----chH--------HHHHHHHhh---ccccceeeecCCCCC-------C-CCC-Cceeec
Q 001947 157 -------------VMAAGH----HHR--------SIVWQIAED---YSHCEFLIRLPGYCP-------M-PAF-RDVIDV 199 (992)
Q Consensus 157 -------------~~~~~~----~~~--------~i~~~l~~~---y~~~d~ll~~~~~~~-------~-p~~-~~v~~v 199 (992)
++..+. ... ...+.+.+. ...++.++.-+++.. + ..+ ..+..|
T Consensus 160 ~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~~~~i 239 (459)
T PLN02448 160 VELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFYELEAQAIDALKSKFPFPVYPI 239 (459)
T ss_pred CccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHHHhhHHHHHHHHhhcCCceEEe
Confidence 000000 000 001111111 111222222111100 0 011 245667
Q ss_pred Cccccc--CC-------C--ChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEEEEe--CCCCC--C
Q 001947 200 PLVVRR--LH-------K--SRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLVC--GASDS--Q 259 (992)
Q Consensus 200 p~~~~~--~~-------~--~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~Vv~--G~~~~--~ 259 (992)
||.... .. . ...++.+|+.-.+++++|||+|||.... .+++..|...++.|++. +.... +
T Consensus 240 GP~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~~~~ 319 (459)
T PLN02448 240 GPSIPYMELKDNSSSSNNEDNEPDYFQWLDSQPEGSVLYVSLGSFLSVSSAQMDEIAAGLRDSGVRFLWVARGEASRLKE 319 (459)
T ss_pred cCcccccccCCCccccccccchhHHHHHHcCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCEEEEEcCchhhHhH
Confidence 775421 00 1 1135677887667788999999998542 23444555556655543 22111 1
Q ss_pred -CCCCeEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEec--
Q 001947 260 -LPPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIR-- 331 (992)
Q Consensus 260 -l~~nv~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~-~G~Gi~v~~-- 331 (992)
.+.|+.+.+ |+| ++|++.+ +||||||+||++|++++|||||++| .+.||+.||+++++ .|+|+.+..
T Consensus 320 ~~~~~~~v~~---w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~GvP~l~~P--~~~DQ~~na~~v~~~~g~G~~~~~~~ 394 (459)
T PLN02448 320 ICGDMGLVVP---WCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAGVPMLTFP--LFWDQPLNSKLIVEDWKIGWRVKREV 394 (459)
T ss_pred hccCCEEEec---cCCHHHHhccCccceEEecCchhHHHHHHHcCCCEEecc--ccccchhhHHHHHHHhCceEEEeccc
Confidence 235777775 555 7887755 5999999999999999999999999 67899999999987 599988853
Q ss_pred ---CCCChhhHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCCCCccchh
Q 001947 332 ---RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRL 387 (992)
Q Consensus 332 ---~~~~~~~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~L 387 (992)
..++++.+.+++++++.++. .+....++.|..+.+.+. +++++..++.+.|
T Consensus 395 ~~~~~~~~~~l~~av~~vl~~~~---~~~~~~r~~a~~~~~~~~--~a~~~gGss~~~l 448 (459)
T PLN02448 395 GEETLVGREEIAELVKRFMDLES---EEGKEMRRRAKELQEICR--GAIAKGGSSDTNL 448 (459)
T ss_pred ccCCcCcHHHHHHHHHHHhcCCc---hhHHHHHHHHHHHHHHHH--HHhcCCCcHHHHH
Confidence 24678999999999997531 112234455555555442 2334444455555
No 40
>PRK01123 shikimate kinase; Provisional
Probab=99.84 E-value=5.7e-19 Score=194.69 Aligned_cols=122 Identities=16% Similarity=0.125 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCC-C
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGA-P 687 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~-~ 687 (992)
.|++..++..+++..+.+ .|++|++.|+||.++|||||||++||++.|++.+++.++++++++++|..+|+..++. .
T Consensus 56 ~~~v~~~~~~~~~~~~~~--~~~~i~i~s~IP~~~GLGSSaA~~va~~~a~~~~~~~~l~~~el~~la~~~e~~~~~~~~ 133 (282)
T PRK01123 56 TRLIERCVELVLERFGID--YGATVRTKSEIPLASGLKSSSAAANATVLATLDALGEDLDDLDILRLGVKASRDAGVTVT 133 (282)
T ss_pred chHHHHHHHHHHHHhCCC--CCEEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhhcccccccc
Confidence 478878888877777765 5999999999999999999999999999999999999999999999999999987764 3
Q ss_pred CCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCcccc
Q 001947 688 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSV 737 (992)
Q Consensus 688 ~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~ 737 (992)
.+.+|+++++|||. ++.+.........+ +.++.|++++++.+.+|
T Consensus 134 g~~~d~~~~~~GG~---~~~~~~~~~~~~~~--~~~~~~vv~~p~~~~~T 178 (282)
T PRK01123 134 GAFDDACASYFGGV---TVTDNREMKLLKRD--EVELDVLVLIPPEGAFS 178 (282)
T ss_pred CchhHHHHHHhCCE---EEEcCCCceEEEEe--cCCcEEEEEECCCCcch
Confidence 45578899999995 34443322221223 34588999988765554
No 41
>TIGR01920 Shik_kin_archae shikimate kinase. This model represents the shikimate kinase (SK) gene found in archaea which is only distantly related to homoserine kinase (thrB) and not atr all to the bacterial SK enzyme. The SK from M. janaschii has been overexpressed in E. coli and characterized. SK catalyzes the fifth step of the biosynthesis of chorismate from D-erythrose-4-phosphate and phosphoenolpyruvate.
Probab=99.83 E-value=4.5e-19 Score=192.72 Aligned_cols=118 Identities=18% Similarity=0.208 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccC-CCC
Q 001947 610 AYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG-APC 688 (992)
Q Consensus 610 nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G-~~~ 688 (992)
|++..++..+.+.++.+ .|+++.+.|+||.++|||||||+++|++.|++.+++.++++++++++|+++|...++ .++
T Consensus 46 n~i~~~~~~~~~~~~~~--~g~~i~i~s~iP~~~GLGSSaA~~~a~~~al~~~~~~~l~~~~l~~la~~~e~~~~~~~~~ 123 (261)
T TIGR01920 46 RLIERILTAIRSKFGIV--DGLEVEVESEIPAGSGLKSSSALVNALVEAVLKAKGVEIDDIDILRLGARLSKDAGLSVTG 123 (261)
T ss_pred HHHHHHHHHHHHhcCCC--CCEEEEEecCCCCCCCcchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhCCCCCC
Confidence 78888888777766654 699999999999999999999999999999999999999999999999999987663 356
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCC
Q 001947 689 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGI 733 (992)
Q Consensus 689 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi 733 (992)
|.+|++++++||. ++.+.++....+..++| ++.+++++.+.
T Consensus 124 ~~~D~~~~~~gG~---~~~~~~~~~~~~~~~~~-~~~~vv~~p~~ 164 (261)
T TIGR01920 124 AFDDAAASYLGGI---VITDNRRMKILKRDKLE-GCTAAVLVPKE 164 (261)
T ss_pred cHHHHHHHHhCCE---EEEeCCCceEEEecCCC-CceEEEEECCC
Confidence 6689999999994 55555443322233333 45677776543
No 42
>TIGR00191 thrB homoserine kinase. P.aeruginosa homoserine kinase seems not to be homologous (see PROSITE:PDOC0054)
Probab=99.83 E-value=1.7e-19 Score=201.08 Aligned_cols=234 Identities=18% Similarity=0.268 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+++..|.+. .|++|.|.|+||.++|||||||.++|++.|++.+++.++++++|+++|.++|.|
T Consensus 60 ~Nlv~~a~~~~~~~~g~~~-~g~~i~i~~~IP~~~GLGSSsa~~vA~l~a~~~l~~~~l~~~el~~~a~~~E~h------ 132 (302)
T TIGR00191 60 DNLIYQVAKRFLDQLGIRM-PPVKVTLEKNIPLGRGLGSSAAAIVAALAAANELCGLPLSKERLLDYASELEGH------ 132 (302)
T ss_pred cccHHHHHHHHHHHcCCCC-CCEEEEEEcCCCCcCCCChHHHHHHHHHHHHHHHcCCCcCHHHHHHHHHHhcCC------
Confidence 5778788888877777653 589999999999999999999999999999999999999999999999999975
Q ss_pred Cccch-hhhhccCcceEEEEeecCccceeeecCC--CCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCC
Q 001947 689 GVMDQ-MASACGEANKLLAMVCQPAELLGVVEIP--SHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLP 765 (992)
Q Consensus 689 G~~D~-~~~~~Gg~~~~~~~~~~~~~~~~~v~~p--~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~ 765 (992)
.|+ .++++||. ++...+.... ..++++ +++.+++++++.+-+|...
T Consensus 133 --~Dnv~~~l~GG~---~~~~~~~~~~-~~~~~~~~~~~~~vl~~p~~~~sT~~a------------------------- 181 (302)
T TIGR00191 133 --PDNVAPALLGGF---QLAFVEDDKL-EVLKIPIFSKLDWVLAIPNIEVSTAEA------------------------- 181 (302)
T ss_pred --cccHHHHhccCE---EEEEEcCCce-EEEEeCCCCCEEEEEEECCCcccHHHH-------------------------
Confidence 365 46889994 3333333222 344443 6899999998776554310
Q ss_pred ccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccc
Q 001947 766 QSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRA 845 (992)
Q Consensus 766 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 845 (992)
+ +.+|+.++
T Consensus 182 -------------------------------~------------~~lp~~~~---------------------------- 190 (302)
T TIGR00191 182 -------------------------------R------------AVLPKAYP---------------------------- 190 (302)
T ss_pred -------------------------------H------------HhCcccCC----------------------------
Confidence 0 11222110
Q ss_pred cccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHh--hhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccc
Q 001947 846 PVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQC--HYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGA 923 (992)
Q Consensus 846 r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~s--H~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Ga 923 (992)
..+.+.+..|+..+..+|.++ +.+ ++++|.+. |+.+|.. .+|+++++++.+++ .|++|+
T Consensus 191 -~~~~v~~~~~~~~l~~al~~~----~~~-l~~~~~~d~l~e~~~~~--l~p~l~~i~~~~~~-----------~Ga~g~ 251 (302)
T TIGR00191 191 -RQDLVFNLSHLAGLVHAIYQK----KPD-LGAIMMKDRIHQPYRES--LIPNLFKIKQAALE-----------KGAYGI 251 (302)
T ss_pred -HHHHHHHHHHHHHHHHHHHcC----CHH-HHHHHcccccchhhHhh--hCCCHHHHHHHHHH-----------CCCeEE
Confidence 011222233455556677664 444 56666554 7888875 68999999999987 689999
Q ss_pred eeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCc
Q 001947 924 KITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAG 974 (992)
Q Consensus 924 kltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~ 974 (992)
+|||+| +|++++.+++.. .+.+.++.+... ..+...++++. ...|+.
T Consensus 252 ~lSGsG--ptv~al~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Ga~ 300 (302)
T TIGR00191 252 TISGSG--PTILAMADEEFA-EQKEQDLLEVLH-KQGIEGTVHVLDFDNDGAR 300 (302)
T ss_pred EEEchh--hhheEEecchhh-HHHHHHHHHHHH-hcCCCeEEEEcccCCCCeE
Confidence 999999 999888765443 233334444443 45667788876 466764
No 43
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=99.83 E-value=4.7e-22 Score=238.06 Aligned_cols=185 Identities=18% Similarity=0.216 Sum_probs=108.9
Q ss_pred CceeecCcccc-cCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hh----HHHhhCCCCcEEEEe-CCCCCC-CCCCe
Q 001947 194 RDVIDVPLVVR-RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WK----LKEEYLPSGWKCLVC-GASDSQ-LPPNF 264 (992)
Q Consensus 194 ~~v~~vp~~~~-~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~----ll~~l~~~~~~~Vv~-G~~~~~-l~~nv 264 (992)
+++..+|.+.. .....+.++.+++.-+.++++||+||||.... .+ +++++...+..+++. ....+. +++|+
T Consensus 246 p~v~~vGgl~~~~~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~~l~~n~ 325 (500)
T PF00201_consen 246 PNVVEVGGLHIKPAKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPENLPKNV 325 (500)
T ss_dssp CTSTTGCGC-S----TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGCHHHTTE
T ss_pred hcccccCccccccccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccccccceE
Confidence 44556666533 23345667777776445789999999997642 22 334454444566554 332223 78999
Q ss_pred EEcCCCCCHH--HHHh--hcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHH
Q 001947 265 IKLPKDAYTP--DFMA--ASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWK 340 (992)
Q Consensus 265 ~v~~f~~~~p--~lL~--aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~ 340 (992)
.+.+ |+| ++|+ .+++||||||+||++||+++|||||++| .+.||+.||+++++.|+|+.++..+++.+.+.
T Consensus 326 ~~~~---W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P--~~~DQ~~na~~~~~~G~g~~l~~~~~~~~~l~ 400 (500)
T PF00201_consen 326 LIVK---WLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIP--LFGDQPRNAARVEEKGVGVVLDKNDLTEEELR 400 (500)
T ss_dssp EEES---S--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-G--CSTTHHHHHHHHHHTTSEEEEGGGC-SHHHHH
T ss_pred EEec---cccchhhhhcccceeeeeccccchhhhhhhccCCccCCC--CcccCCccceEEEEEeeEEEEEecCCcHHHHH
Confidence 8874 777 7885 5789999999999999999999999999 78999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCc-----------cCCCCHHHHHHHHHHHHHccCccccCCCCccchhhHhh
Q 001947 341 PYLERAISLKPCY-----------EGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDAI 391 (992)
Q Consensus 341 ~al~~ll~~~~~~-----------~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~Lr~a~ 391 (992)
++|+++++++.+. ..+..+.++++.+|+-.++ +.|+.+||+..
T Consensus 401 ~ai~~vl~~~~y~~~a~~ls~~~~~~p~~p~~~~~~~ie~v~~--------~~~~~~l~~~~ 454 (500)
T PF00201_consen 401 AAIREVLENPSYKENAKRLSSLFRDRPISPLERAVWWIEYVAR--------HGGAPHLRSPA 454 (500)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHTTT--------------------------------------
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHh--------cCCCcccCChh
Confidence 9999999877431 1567788888888887653 45677777663
No 44
>PTZ00299 homoserine kinase; Provisional
Probab=99.83 E-value=3.6e-19 Score=198.40 Aligned_cols=249 Identities=18% Similarity=0.175 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCC---HHHHHHHHHHHhccccC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIH---PRDLALLCQKVENHIVG 685 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~---~~el~~la~~~E~~~~G 685 (992)
.|.++.++..++++++....+|+++.|.++||.++|||||||.+||++.+++.+++.+++ .++|.++|.++|.|.+|
T Consensus 61 ~nlv~~a~~~~~~~~~~~~~~g~~i~i~k~IP~~~GLGSSsA~avA~l~a~n~l~g~~l~~~~~~el~~~A~~~EGHpDN 140 (336)
T PTZ00299 61 DNMVVQACRLAFEEYAHKSMPPLKFIMHSNIPYGCGCGSSSAAAVAGFVAGMKLCGLTMETENEEALLQAIAKFEGHPDN 140 (336)
T ss_pred chHHHHHHHHHHHHhcCCCCCceEEEEecCCCccCCccHHHHHHHHHHHHHHHHhCCCCCccCHHHHHHHHHhhcCCccc
Confidence 567777777777676643125899999999999999999999999999999999999995 79999999999987544
Q ss_pred CCCCccchhhhhccCcceEEEEeecCccc-eeeecCCCCeEEEEEeCCCc--cccCCCCCcchhhhhhcchhhhhhhccc
Q 001947 686 APCGVMDQMASACGEANKLLAMVCQPAEL-LGVVEIPSHIRFWGIDSGIR--HSVGGADYGSVRAGAFMGRKMIKSTASG 762 (992)
Q Consensus 686 ~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~-~~~v~~p~~~~~vl~dsgi~--~~~~~~~y~~rr~~~~~~~~~i~~~a~~ 762 (992)
+ .++++||.. +.......+. ...++.|+++.++++..+.. -+|
T Consensus 141 V-------apal~GG~~--~~~~~~~ge~~~~~i~~~~~~~~vv~iP~~~~~~sT------------------------- 186 (336)
T PTZ00299 141 A-------APAIYGGIQ--LVYKKDNGRFLTYRVPTPPNLSVVLFVPHNKMKANT------------------------- 186 (336)
T ss_pred H-------HHHHhCCEE--EEEecCCCceEEEecCCCCCeEEEEEECCCCccccH-------------------------
Confidence 4 379999952 2221122222 13556667888888853221 011
Q ss_pred cCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccc
Q 001947 763 MLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYF 842 (992)
Q Consensus 763 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 842 (992)
+.. .+.||+.++
T Consensus 187 -------------------------------~~a------------R~vLP~~v~------------------------- 198 (336)
T PTZ00299 187 -------------------------------HVT------------RNLIPTSVS------------------------- 198 (336)
T ss_pred -------------------------------HHH------------HhhCcccCc-------------------------
Confidence 001 135665442
Q ss_pred ccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCccc
Q 001947 843 VRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFG 922 (992)
Q Consensus 843 ~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~G 922 (992)
..+++.+..|+..+..+|.++ |++.+..+.+.-|+.||... ..|+++.+.+.+.+ .|++|
T Consensus 199 ----~~dav~n~~~~~~lv~al~~~----d~~ll~~~~D~lhep~R~~~-liP~~~~v~~~~~~-----------~Ga~g 258 (336)
T PTZ00299 199 ----LEDAVFNISRTSILVLALSTG----DLRMLKSCSDKLHEQQRSDA-LFPHFRPCVKAARE-----------AGAHY 258 (336)
T ss_pred ----HHHHHHhhhHHHHHHHHHHhC----CHHHHHhchhcccCcccccc-cCccHHHHHHHHHH-----------CCCeE
Confidence 234566667777788889886 89888764444799999621 58999999999887 79999
Q ss_pred ceeeccccCceEEEEccC-----------CcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCceeEEEEEE
Q 001947 923 AKITGGGSGGTICVIGRN-----------SLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGKFGHLRIR 982 (992)
Q Consensus 923 akltGaG~GG~vi~l~~~-----------~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~~~~~~~~ 982 (992)
+-|||+| .|++++.+. ...++++.+++.+.|. +.|....+++. +..|++...---||
T Consensus 259 ~~lSGSG--PTv~al~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~~~~~~~ 328 (336)
T PTZ00299 259 AFLSGAG--PSVCALVGGRHGDPLTQPREERKAESVAEAMIKAAE-AVGVAGRVIITQPSDQGVHLVGTTCIR 328 (336)
T ss_pred EEEEchh--hhheEEeccccccccccccchhHHHHHHHHHHHHHH-HcCCceEEEEccCCCCCcEEEeeeecC
Confidence 9999999 999988762 2113467777777774 66888899887 56698877555444
No 45
>PLN02670 transferase, transferring glycosyl groups
Probab=99.83 E-value=2.5e-18 Score=200.69 Aligned_cols=344 Identities=13% Similarity=0.127 Sum_probs=197.1
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC--CCceeeeeeccc--CCcccccccccChHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ--SPRLFIRKVLLD--CGAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~--~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~ 96 (992)
++.++.||++|.+.||+.|..+|..|||++..... ....... .+.+.+...... .|+........+.......+.
T Consensus 12 ~P~paqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~ 91 (472)
T PLN02670 12 FPWLAMGHLIPFLRLSKLLAQKGHKISFISTPRNLHRLPKIPSQLSSSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLL 91 (472)
T ss_pred eCChhhhHHHHHHHHHHHHHhCCCEEEEEeCCchHHhhhhccccCCCCeeEEECCCCccCCCCCCcccccccchhhHHHH
Confidence 68899999999999999999999999999765311 1111000 012233222100 122110000011110000111
Q ss_pred HHhhccHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCch--hHHHHHH-----------------
Q 001947 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSW--DFIYAEY----------------- 156 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~--~~~~~~~----------------- 156 (992)
.. ..........+++++.+|++||+|. .+|+..+|+.+|||.+.+..++- ...+..+
T Consensus 92 ~~---~~~~~~~~~~~~l~~~~~~cvI~D~f~~wa~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (472)
T PLN02670 92 KK---AFDLLEPPLTTFLETSKPDWIIYDYASHWLPSIAAELGISKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAEDFT 168 (472)
T ss_pred HH---HHHHhHHHHHHHHHhCCCcEEEECCcchhHHHHHHHcCCCEEEEehhhHHHHHHHhhhHhhhhcccCCCcccccc
Confidence 10 1111222335566777899999997 88999999999999988733220 0000000
Q ss_pred -Hhhh-c-c--------chHHHH----------HHHH---hhccccceeeecCCCCC-------CC-CC-CceeecCccc
Q 001947 157 -VMAA-G-H--------HHRSIV----------WQIA---EDYSHCEFLIRLPGYCP-------MP-AF-RDVIDVPLVV 203 (992)
Q Consensus 157 -~~~~-~-~--------~~~~i~----------~~l~---~~y~~~d~ll~~~~~~~-------~p-~~-~~v~~vp~~~ 203 (992)
++.. + . ...... .... .....++.++--++... +. .. ..+..|||+.
T Consensus 169 ~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~ 248 (472)
T PLN02670 169 VVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFAIGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLP 248 (472)
T ss_pred CCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhhcccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCC
Confidence 0000 0 0 000000 0000 00111222221111100 00 01 3577788874
Q ss_pred cc--C--C-C--Ch---HHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCc--EEEEeCC-CC--C---CC
Q 001947 204 RR--L--H-K--SR---KEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGW--KCLVCGA-SD--S---QL 260 (992)
Q Consensus 204 ~~--~--~-~--~r---~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~--~~Vv~G~-~~--~---~l 260 (992)
.. . . . .. .++.+|++-.+++.+|||||||...- .++...|...+. .+++-.. .. . .+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~l 328 (472)
T PLN02670 249 PVIEDDEEDDTIDVKGWVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEML 328 (472)
T ss_pred ccccccccccccccchhHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcC
Confidence 31 1 0 0 11 35678888777788999999998652 233334443333 3333321 11 1 15
Q ss_pred CCC---------eEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEE
Q 001947 261 PPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGV 327 (992)
Q Consensus 261 ~~n---------v~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi 327 (992)
|+| +.+. .|+| ++|++ +.+||||||+||++|++++|||||++| .+.||+.||+++++.|+|+
T Consensus 329 p~~f~~~~~~rG~vv~---~W~PQ~~IL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~g~Gv 403 (472)
T PLN02670 329 PDGFEERVKGRGMIHV---GWVPQVKILSHESVGGFLTHCGWNSVVEGLGFGRVLILFP--VLNEQGLNTRLLHGKKLGL 403 (472)
T ss_pred ChHHHHhccCCCeEEe---CcCCHHHHhcCcccceeeecCCcchHHHHHHcCCCEEeCc--chhccHHHHHHHHHcCeeE
Confidence 555 3333 4777 78866 555999999999999999999999999 6889999999999999999
Q ss_pred EEecC----CCChhhHHHHHHHHhhCCC--Ccc----------CCCCHHHHHHHHHHHHHcc
Q 001947 328 EMIRR----DLLTGHWKPYLERAISLKP--CYE----------GGINGGEVAAHILQETAIG 373 (992)
Q Consensus 328 ~v~~~----~~~~~~l~~al~~ll~~~~--~~~----------~~~~G~~~aA~~I~~~~~~ 373 (992)
.+... .++.+++.++|++++.+++ .++ ....+..++|+.|.+.+..
T Consensus 404 ~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 404 EVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRE 465 (472)
T ss_pred EeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHH
Confidence 99753 3788999999999997642 111 4777778888888777643
No 46
>PLN02764 glycosyltransferase family protein
Probab=99.83 E-value=2.9e-18 Score=198.62 Aligned_cols=327 Identities=13% Similarity=0.116 Sum_probs=189.0
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC-CC-ceeeeee--cccCCcccccccccChH-
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-SP-RLFIRKV--LLDCGAVQADALTVDRL- 89 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~-~~-~~~~~~~--~~~~g~~~~~~~~~~~~- 89 (992)
+.|++ ++.++.||++|.+.||+.|..+|+.|+|++..... .... +. .+ .+.++.. ....|+........+..
T Consensus 6 ~Hvvl-~P~paqGHi~P~l~LAk~La~~g~~vT~~tt~~~~~~~~~-~~~~~~~~~v~~~~~p~~~glp~g~e~~~~~~~ 83 (453)
T PLN02764 6 FHVLM-YPWFATGHMTPFLFLANKLAEKGHTVTFLLPKKALKQLEH-LNLFPHNIVFRSVTVPHVDGLPVGTETVSEIPV 83 (453)
T ss_pred cEEEE-ECCcccccHHHHHHHHHHHHhCCCEEEEEeCcchhhhhcc-cccCCCCceEEEEECCCcCCCCCcccccccCCh
Confidence 44533 68899999999999999999999999999765311 1111 11 01 1112211 11113221000000001
Q ss_pred HHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCc-h-hHHH--H-HH----Hhhh
Q 001947 90 ASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFS-W-DFIY--A-EY----VMAA 160 (992)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~-~-~~~~--~-~~----~~~~ 160 (992)
.....+.. ..........++|++.+||+||+|+.+|+..+|+.+|||.+.+.... . ...+ . .. ++..
T Consensus 84 ~~~~~~~~----a~~~~~~~~~~~l~~~~~~~iV~D~~~w~~~vA~~~gIP~~~f~~~~a~~~~~~~~~~~~~~~~~pgl 159 (453)
T PLN02764 84 TSADLLMS----AMDLTRDQVEVVVRAVEPDLIFFDFAHWIPEVARDFGLKTVKYVVVSASTIASMLVPGGELGVPPPGY 159 (453)
T ss_pred hHHHHHHH----HHHHhHHHHHHHHHhCCCCEEEECCchhHHHHHHHhCCCEEEEEcHHHHHHHHHhcccccCCCCCCCC
Confidence 11111111 11122233456677778999999998899999999999998873221 0 0000 0 00 0000
Q ss_pred cc---c--------------------hHHHHHHHHhhccccceeeecCCCCC-------CCCC--CceeecCcccccC--
Q 001947 161 GH---H--------------------HRSIVWQIAEDYSHCEFLIRLPGYCP-------MPAF--RDVIDVPLVVRRL-- 206 (992)
Q Consensus 161 ~~---~--------------------~~~i~~~l~~~y~~~d~ll~~~~~~~-------~p~~--~~v~~vp~~~~~~-- 206 (992)
+. . .......+......++.++.-+++.. +... +++..|||+...+
T Consensus 160 p~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~~ 239 (453)
T PLN02764 160 PSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSDVIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPDK 239 (453)
T ss_pred CCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCCEEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCccc
Confidence 00 0 00011111111122222332222110 0001 3577888874321
Q ss_pred -CCChHHHHHHhCCCCCCcEEEEEcCCCCC-h-hhHHH---hhC--CCCcEEEEeC---CCC-C-CCCCCeEEc----CC
Q 001947 207 -HKSRKEVRKELGIEDDVKLLILNFGGQPA-G-WKLKE---EYL--PSGWKCLVCG---ASD-S-QLPPNFIKL----PK 269 (992)
Q Consensus 207 -~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~-~-~~ll~---~l~--~~~~~~Vv~G---~~~-~-~l~~nv~v~----~f 269 (992)
...+.++.+||+-.+++++|||||||... . .++.+ .|. ...+.+|+.- ... . .+|+|+... +.
T Consensus 240 ~~~~~~~cl~WLD~q~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~ 319 (453)
T PLN02764 240 TRELEERWVKWLSGYEPDSVVFCALGSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGV 319 (453)
T ss_pred cccchhHHHHHHhCCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCc
Confidence 11245678999988889999999999866 2 23333 343 3455666541 111 1 166665422 10
Q ss_pred --CCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecC---CCChhhH
Q 001947 270 --DAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRR---DLLTGHW 339 (992)
Q Consensus 270 --~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~~G~Gi~v~~~---~~~~~~l 339 (992)
..|+| ++|++ +++||||||+||++|++++|+|||++| .+.||+.||++++ ..|+|+.+..+ .++.+.+
T Consensus 320 v~~~W~PQ~~vL~h~~v~~FvtH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i 397 (453)
T PLN02764 320 VWGGWVQQPLILSHPSVGCFVSHCGFGSMWESLLSDCQIVLVP--QLGDQVLNTRLLSDELKVSVEVAREETGWFSKESL 397 (453)
T ss_pred EEeCCCCHHHHhcCcccCeEEecCCchHHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhceEEEeccccCCccCHHHH
Confidence 14777 78876 677999999999999999999999999 6889999999996 57999887543 4788999
Q ss_pred HHHHHHHhhCC
Q 001947 340 KPYLERAISLK 350 (992)
Q Consensus 340 ~~al~~ll~~~ 350 (992)
.+++++++.+.
T Consensus 398 ~~av~~vm~~~ 408 (453)
T PLN02764 398 RDAINSVMKRD 408 (453)
T ss_pred HHHHHHHhcCC
Confidence 99999999653
No 47
>PLN02173 UDP-glucosyl transferase family protein
Probab=99.83 E-value=3.5e-18 Score=198.47 Aligned_cols=345 Identities=13% Similarity=0.143 Sum_probs=193.2
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhh
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 100 (992)
++.++.||++|.+.||+.|..+|+.|+|++..... ..... ..+.+.+... ..|+........+. ...+...+.
T Consensus 11 ~P~paqGHi~P~l~lAk~La~~G~~vT~v~t~~~~~~~~~~-~~~~i~~~~i--pdglp~~~~~~~~~---~~~~~~~~~ 84 (449)
T PLN02173 11 VPFPSQGHITPIRQFCKRLHSKGFKTTHTLTTFIFNTIHLD-PSSPISIATI--SDGYDQGGFSSAGS---VPEYLQNFK 84 (449)
T ss_pred ecCcccccHHHHHHHHHHHHcCCCEEEEEECCchhhhcccC-CCCCEEEEEc--CCCCCCcccccccC---HHHHHHHHH
Confidence 68899999999999999999999999999765311 11111 1122334332 12332100000110 111221111
Q ss_pred ccHHHhHHHHHHHHHc----CCC-cEEEECC-CchHHHHHHHcCCcEEEEecCc---hhHHHHHH---------Hhhhcc
Q 001947 101 APRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS---WDFIYAEY---------VMAAGH 162 (992)
Q Consensus 101 ~~~~~~l~~~~~~L~~----~kP-DlVVsD~-~~~a~~aA~~~gIP~v~is~~~---~~~~~~~~---------~~~~~~ 162 (992)
........++|++ .+| ++||+|. .+|+..+|+.+|||.+.+.... ..-.+... ++..+.
T Consensus 85 ---~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~~~a~~~~~~~~~~~~~~~~~~~~pg~p~ 161 (449)
T PLN02173 85 ---TFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFTQSCAVNYINYLSYINNGSLTLPIKDLPL 161 (449)
T ss_pred ---HhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEechHHHHHHHHHhHHhccCCccCCCCCCCC
Confidence 0111222334443 367 9999997 8899999999999998872211 10000000 000000
Q ss_pred ----c----------hHHHHHHH---HhhccccceeeecCCCCC-------CCCCCceeecCccccc--------C-CC-
Q 001947 163 ----H----------HRSIVWQI---AEDYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVVRR--------L-HK- 208 (992)
Q Consensus 163 ----~----------~~~i~~~l---~~~y~~~d~ll~~~~~~~-------~p~~~~v~~vp~~~~~--------~-~~- 208 (992)
. .+.....+ ......++.++--++... +.....+..|||+... . ..
T Consensus 162 l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~ 241 (449)
T PLN02173 162 LELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDLDLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDNDY 241 (449)
T ss_pred CChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHhhHHHHHHHHhcCCeeEEcccCchhhccccccccccc
Confidence 0 00011111 111223333332221110 0011346778887421 0 00
Q ss_pred -------C-hHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEEEEeCC-C--CCC-----C-CCCeEE
Q 001947 209 -------S-RKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLVCGA-S--DSQ-----L-PPNFIK 266 (992)
Q Consensus 209 -------~-r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~Vv~G~-~--~~~-----l-~~nv~v 266 (992)
. .+.+.+|++..+++++|||||||.... . ++...|....+.+++-.. . .++ . +.|+.+
T Consensus 242 ~~~~~~~~~~~~c~~WLd~~~~~svvyvsfGS~~~~~~~~~~ela~gLs~~~flWvvr~~~~~~lp~~~~~~~~~~~~~i 321 (449)
T PLN02173 242 DLNLFDLKEAALCTDWLDKRPQGSVVYIAFGSMAKLSSEQMEEIASAISNFSYLWVVRASEESKLPPGFLETVDKDKSLV 321 (449)
T ss_pred cccccccccchHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHhcCCCEEEEEeccchhcccchHHHhhcCCceEE
Confidence 1 124668888777788999999997652 2 333345334444444311 1 111 2 466777
Q ss_pred cCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEecCC----CChh
Q 001947 267 LPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRD----LLTG 337 (992)
Q Consensus 267 ~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~-G~Gi~v~~~~----~~~~ 337 (992)
.+ |+| ++|++.+ +||||||+||++|++++|||||++| .+.||+.|++++++. |+|+.+..++ ++.+
T Consensus 322 ~~---W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e 396 (449)
T PLN02173 322 LK---WSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLGVPMVAMP--QWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKRE 396 (449)
T ss_pred eC---CCCHHHHhCCCccceEEecCccchHHHHHHcCCCEEecC--chhcchHHHHHHHHHhCceEEEeecccCCcccHH
Confidence 65 566 7888755 9999999999999999999999999 788999999999875 9998886432 4789
Q ss_pred hHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCCCCccchh
Q 001947 338 HWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRL 387 (992)
Q Consensus 338 ~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~L 387 (992)
.+.+++++++.++. ....++-|+.+.+.+. +++.+..++...|
T Consensus 397 ~v~~av~~vm~~~~-----~~~~r~~a~~~~~~a~--~Av~~gGSS~~~l 439 (449)
T PLN02173 397 EIEFSIKEVMEGEK-----SKEMKENAGKWRDLAV--KSLSEGGSTDINI 439 (449)
T ss_pred HHHHHHHHHhcCCh-----HHHHHHHHHHHHHHHH--HHhcCCCcHHHHH
Confidence 99999999996532 1233444444444432 2334444444444
No 48
>PRK01212 homoserine kinase; Provisional
Probab=99.83 E-value=3e-19 Score=199.36 Aligned_cols=233 Identities=19% Similarity=0.234 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+++..|.. .|++|.|.++||.++|||||||..+|++.|++.+++.+++.++|+++|.++|.+.
T Consensus 62 ~Nli~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSa~aaA~l~al~~l~~~~l~~~eL~~~a~~~e~~~----- 134 (301)
T PRK01212 62 KNLVYQAALKFLEKLGKP--PGLRIELEKNIPLGRGLGSSAASIVAGLVAANELAGLPLSKEELLQLATEGEGHP----- 134 (301)
T ss_pred cccHHHHHHHHHHHcCCC--CCeEEEEEeCCCCCCCCcHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCCH-----
Confidence 467777788777777754 6899999999999999999999999999999999999999999999999999752
Q ss_pred Cccchh-hhhccCcceEEEE-eecCccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCc
Q 001947 689 GVMDQM-ASACGEANKLLAM-VCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQ 766 (992)
Q Consensus 689 G~~D~~-~~~~Gg~~~~~~~-~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~ 766 (992)
|+. ++++||. ++. +..+.. ..++++|+++.+++++++..-+|.. +
T Consensus 135 ---ddv~~~l~GG~---~~~~~g~g~~-~~~~~~~~~~~~vlv~p~~~~sT~~--------------------a------ 181 (301)
T PRK01212 135 ---DNVAPALLGGL---VLALEENGVI-SVKIPVFDDLKWVVAIPNIELSTAE--------------------A------ 181 (301)
T ss_pred ---HHHHHHHhCCE---EEEEECCceE-EEEecCCCCeEEEEEECCCcCCHHH--------------------H------
Confidence 443 6789995 333 233322 3566666788899998765443321 0
Q ss_pred cCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCcccccccc
Q 001947 767 SLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAP 846 (992)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 846 (992)
+ +.+|+.+ .
T Consensus 182 ------------------------------~------------~~l~~~~-----------------------------~ 190 (301)
T PRK01212 182 ------------------------------R------------AVLPKQY-----------------------------S 190 (301)
T ss_pred ------------------------------H------------HhCcCcC-----------------------------C
Confidence 0 0111100 0
Q ss_pred ccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHH-hhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCccccee
Q 001947 847 VCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKI 925 (992)
Q Consensus 847 ~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~-sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Gakl 925 (992)
..+.+.+..|+..+..+|.++ |++.+|++|+. .|+.+|.. .+|+++++++.+++ .|++|++|
T Consensus 191 ~~~~~~~~~~~~~l~~al~~~----d~~~~~~~~~~~~~~~~~~~--~~p~~~~i~~~~~~-----------~Ga~g~~~ 253 (301)
T PRK01212 191 LKDAVFNSSRAALLVAALYTG----DYELAGRAMKDVLHEPYRAK--LIPGFAEVRQAALE-----------AGALGAGI 253 (301)
T ss_pred HHHHHHHHHHHHHHHHHHhhC----CHHHHHHHhchhheHHhHHh--hCCCHHHHHHHHHH-----------CCCeEEEE
Confidence 112334455777788888875 89999999954 58887654 56999999998887 68899999
Q ss_pred eccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCc
Q 001947 926 TGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAG 974 (992)
Q Consensus 926 tGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~ 974 (992)
||+| +|++++.++... +++.+++++.| .. |..+.++.+ ...|+.
T Consensus 254 SGsG--ptv~~l~~~~~~-~~~~~~l~~~~-~~-~~~~~~~~~~~~~~G~~ 299 (301)
T PRK01212 254 SGAG--PTVFALCDKEDA-EKVADALQKAF-LQ-GIEGFVHVLRLDTAGAR 299 (301)
T ss_pred Echh--hheeEEeccccH-HHHHHHHHHhh-cc-CCCeEEEEeccCCCceE
Confidence 9987 999888765543 56777777766 22 778888886 466664
No 49
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.82 E-value=2.5e-18 Score=196.89 Aligned_cols=324 Identities=18% Similarity=0.073 Sum_probs=194.6
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (992)
|+|++...|.| ||...++.++++|.++||+|++++...... ........+.+..... .+.. .......+...
T Consensus 2 ~~i~i~~~g~g-G~~~~~~~la~~L~~~g~ev~vv~~~~~~~-~~~~~~~g~~~~~~~~-~~~~-----~~~~~~~l~~~ 73 (357)
T PRK00726 2 KKILLAGGGTG-GHVFPALALAEELKKRGWEVLYLGTARGME-ARLVPKAGIEFHFIPS-GGLR-----RKGSLANLKAP 73 (357)
T ss_pred cEEEEEcCcch-HhhhHHHHHHHHHHhCCCEEEEEECCCchh-hhccccCCCcEEEEec-cCcC-----CCChHHHHHHH
Confidence 56666666777 999999999999999999999997743211 1111101122222100 0100 01111111112
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEECCC---chHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHH
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~---~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~ 172 (992)
..+ ...+....+++++.+||+|+++.. ..+.++++..++|+|.+....|......+.
T Consensus 74 ~~~-----~~~~~~~~~~ik~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~~~~r~~--------------- 133 (357)
T PRK00726 74 FKL-----LKGVLQARKILKRFKPDVVVGFGGYVSGPGGLAARLLGIPLVIHEQNAVPGLANKLL--------------- 133 (357)
T ss_pred HHH-----HHHHHHHHHHHHhcCCCEEEECCCcchhHHHHHHHHcCCCEEEEcCCCCccHHHHHH---------------
Confidence 111 123455677889999999998862 234456677899998763322211000000
Q ss_pred hhccccceeeec-CC--CCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHH-Hh---h
Q 001947 173 EDYSHCEFLIRL-PG--YCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EE---Y 243 (992)
Q Consensus 173 ~~y~~~d~ll~~-~~--~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll-~~---l 243 (992)
|..++.++.. +. ....+....+.+.|+....... ...++.++++++.++|++.+|+.+.. ..++ +. +
T Consensus 134 --~~~~d~ii~~~~~~~~~~~~~~i~vi~n~v~~~~~~~--~~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~~ 209 (357)
T PRK00726 134 --ARFAKKVATAFPGAFPEFFKPKAVVTGNPVREEILAL--AAPPARLAGREGKPTLLVVGGSQGARVLNEAVPEALALL 209 (357)
T ss_pred --HHHhchheECchhhhhccCCCCEEEECCCCChHhhcc--cchhhhccCCCCCeEEEEECCcHhHHHHHHHHHHHHHHh
Confidence 0011111100 00 0000111223344433221111 11223456666677777666654432 2233 32 2
Q ss_pred CCCCcEEEEeCCCCCC-----C--CCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCChH
Q 001947 244 LPSGWKCLVCGASDSQ-----L--PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEP 314 (992)
Q Consensus 244 ~~~~~~~Vv~G~~~~~-----l--~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~--~~EQ~ 314 (992)
......++++|....+ + .-++.+.+|+++++++|++||++|+++|.+|++|||++|+|+|++|.++ ..||.
T Consensus 210 ~~~~~~~~~~G~g~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~ 289 (357)
T PRK00726 210 PEALQVIHQTGKGDLEEVRAAYAAGINAEVVPFIDDMAAAYAAADLVICRAGASTVAELAAAGLPAILVPLPHAADDHQT 289 (357)
T ss_pred hhCcEEEEEcCCCcHHHHHHHhhcCCcEEEeehHhhHHHHHHhCCEEEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHH
Confidence 2222345567876432 1 2237888998889999999999999999999999999999999999643 35788
Q ss_pred HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 001947 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (992)
Q Consensus 315 ~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~~~ 371 (992)
.|++.+.+.|.|..+..++++++.|.++|+++++++..+. ...++.+++++.+++.+
T Consensus 290 ~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 290 ANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDPERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred HHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8999999999999999888888999999999998764321 57889999998888764
No 50
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.82 E-value=7.1e-18 Score=196.71 Aligned_cols=346 Identities=13% Similarity=0.103 Sum_probs=191.5
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhc
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (992)
++.++.||++|.+.||+.|..+|+.|+|++...... ......+.+.+... ..|+...+.-..+.. .+...+..
T Consensus 13 vPfpaqGHi~P~l~LAk~La~~G~~VT~v~T~~n~~-~~~~~~~~i~~~~i--p~glp~~~~~~~~~~----~~~~~~~~ 85 (451)
T PLN02410 13 VPVPAQGHISPMMQLAKTLHLKGFSITIAQTKFNYF-SPSDDFTDFQFVTI--PESLPESDFKNLGPI----EFLHKLNK 85 (451)
T ss_pred ECCCccccHHHHHHHHHHHHcCCCEEEEEeCccccc-ccccCCCCeEEEeC--CCCCCcccccccCHH----HHHHHHHH
Confidence 688999999999999999999999999997653211 11111112333221 113221000001111 11111110
Q ss_pred cHHHhHHHHHHH-HH--cCCCcEEEECC-CchHHHHHHHcCCcEEEEecCc-hh-HHHHH---HH------h--------
Q 001947 102 PRKSILKDEVEW-LN--SIKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYAE---YV------M-------- 158 (992)
Q Consensus 102 ~~~~~l~~~~~~-L~--~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~-~~~~~---~~------~-------- 158 (992)
.....+++.++- .. ..+|++||+|+ .+|+..+|+.+|||.+.+...+ +. ..+.. +. +
T Consensus 86 ~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (451)
T PLN02410 86 ECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFSTTSATAFVCRSVFDKLYANNVLAPLKEPKGQQ 165 (451)
T ss_pred HhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEccCHHHHHHHHHHHHHHhccCCCCccccccCc
Confidence 111122222221 11 12569999997 8899999999999999873322 11 00000 00 0
Q ss_pred -----hhcc----chH--------HHHHHHHh--hccccceeeecCCCCC-------C-CCC-CceeecCccccc---CC
Q 001947 159 -----AAGH----HHR--------SIVWQIAE--DYSHCEFLIRLPGYCP-------M-PAF-RDVIDVPLVVRR---LH 207 (992)
Q Consensus 159 -----~~~~----~~~--------~i~~~l~~--~y~~~d~ll~~~~~~~-------~-p~~-~~v~~vp~~~~~---~~ 207 (992)
..+. ... .....+.. ....++.++--++... + ... +.+..|||+... ..
T Consensus 166 ~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~~~~~~v~~vGpl~~~~~~~~ 245 (451)
T PLN02410 166 NELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASCLESSSLSRLQQQLQIPVYPIGPLHLVASAPT 245 (451)
T ss_pred cccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHHhhHHHHHHHHhccCCCEEEecccccccCCCc
Confidence 0000 000 00111110 0112332322111110 0 001 357778887431 11
Q ss_pred C---ChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCc--EEEEe-CCC--CC---CC--------CCC
Q 001947 208 K---SRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGW--KCLVC-GAS--DS---QL--------PPN 263 (992)
Q Consensus 208 ~---~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~--~~Vv~-G~~--~~---~l--------~~n 263 (992)
. ...++.+|++..+.+.+|||+|||...- .++...|...+. .+++- +.. .. .+ +.|
T Consensus 246 ~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~ 325 (451)
T PLN02410 246 SLLEENKSCIEWLNKQKKNSVIFVSLGSLALMEINEVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGR 325 (451)
T ss_pred cccccchHHHHHHHhCCCCcEEEEEccccccCCHHHHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCC
Confidence 1 1124567888777788999999998762 133334543333 33332 210 00 13 355
Q ss_pred eEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEecCCCChhh
Q 001947 264 FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDLLTGH 338 (992)
Q Consensus 264 v~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~-G~Gi~v~~~~~~~~~ 338 (992)
..+.+ |+| ++|++ +.+||||||+||++|++++|||||++| .+.||+.||+++++. |+|+.+. ..++.+.
T Consensus 326 g~v~~---w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~-~~~~~~~ 399 (451)
T PLN02410 326 GYIVK---WAPQKEVLSHPAVGGFWSHCGWNSTLESIGEGVPMICKP--FSSDQKVNARYLECVWKIGIQVE-GDLDRGA 399 (451)
T ss_pred eEEEc---cCCHHHHhCCCccCeeeecCchhHHHHHHHcCCCEEecc--ccccCHHHHHHHHHHhCeeEEeC-CcccHHH
Confidence 55654 666 78877 777999999999999999999999999 688999999999866 9999997 5788899
Q ss_pred HHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCCCCccchh
Q 001947 339 WKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRL 387 (992)
Q Consensus 339 l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~L 387 (992)
+.++|++++.+++ ....++.|+.+.+.+. +++.+..+....|
T Consensus 400 v~~av~~lm~~~~-----~~~~r~~a~~l~~~~~--~a~~~gGsS~~~l 441 (451)
T PLN02410 400 VERAVKRLMVEEE-----GEEMRKRAISLKEQLR--ASVISGGSSHNSL 441 (451)
T ss_pred HHHHHHHHHcCCc-----HHHHHHHHHHHHHHHH--HHhcCCCCHHHHH
Confidence 9999999997542 2234445555544442 2223334444444
No 51
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.81 E-value=7.1e-18 Score=192.28 Aligned_cols=298 Identities=18% Similarity=0.112 Sum_probs=177.0
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhc
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (992)
..|...||..+++.++++|.++||+|++++...... ...+....+.+..... .+.. .......+..+..+
T Consensus 5 ~~~~~gG~~~~~~~la~~l~~~G~ev~v~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~--- 74 (350)
T cd03785 5 AGGGTGGHIFPALALAEELRERGAEVLFLGTKRGLE-ARLVPKAGIPLHTIPV-GGLR-----RKGSLKKLKAPFKL--- 74 (350)
T ss_pred EecCchhhhhHHHHHHHHHHhCCCEEEEEECCCcch-hhcccccCCceEEEEe-cCcC-----CCChHHHHHHHHHH---
Confidence 344445999999999999999999999997653211 1111101112211100 0000 00111111111111
Q ss_pred cHHHhHHHHHHHHHcCCCcEEEECCC---chHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhcccc
Q 001947 102 PRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHC 178 (992)
Q Consensus 102 ~~~~~l~~~~~~L~~~kPDlVVsD~~---~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~ 178 (992)
...+....+++++++||+|+++.. .++..+++..++|++......|..... .+ .+..+
T Consensus 75 --~~~~~~~~~~i~~~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~~~---------------~~--~~~~~ 135 (350)
T cd03785 75 --LKGVLQARKILKKFKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGLAN---------------RL--LARFA 135 (350)
T ss_pred --HHHHHHHHHHHHhcCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccHHH---------------HH--HHHhh
Confidence 113345567789999999998752 234567788899998753222211000 00 01112
Q ss_pred ceeeecCCCCC--C-CCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHH-H---hhCCCCcE
Q 001947 179 EFLIRLPGYCP--M-PAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLPSGWK 249 (992)
Q Consensus 179 d~ll~~~~~~~--~-p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll-~---~l~~~~~~ 249 (992)
+.++....... . +....+++.|........ ... ++++++++++++|++.+|+.+.. ..++ + .+...++.
T Consensus 136 ~~vi~~s~~~~~~~~~~~~~~i~n~v~~~~~~~-~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~ 213 (350)
T cd03785 136 DRVALSFPETAKYFPKDKAVVTGNPVREEILAL-DRE-RARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLRKRLQ 213 (350)
T ss_pred CEEEEcchhhhhcCCCCcEEEECCCCchHHhhh-hhh-HHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeE
Confidence 22222111100 0 111122333332221111 112 56778877787777777765542 2233 2 23323454
Q ss_pred E-EEeCCCCCC--------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC--CCChHHHHH
Q 001947 250 C-LVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY--FNEEPFLRN 318 (992)
Q Consensus 250 ~-Vv~G~~~~~--------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~--~~EQ~~NA~ 318 (992)
+ +++|....+ +.+|+++.+|+++++++|+.||++|+++|.+|++|||++|+|+|++|.+. ..+|..|++
T Consensus 214 ~~~i~G~g~~~~l~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~ 293 (350)
T cd03785 214 VIHQTGKGDLEEVKKAYEELGVNYEVFPFIDDMAAAYAAADLVISRAGASTVAELAALGLPAILIPLPYAADDHQTANAR 293 (350)
T ss_pred EEEEcCCccHHHHHHHHhccCCCeEEeehhhhHHHHHHhcCEEEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHH
Confidence 3 466776322 23689999998889999999999999999999999999999999998654 467888999
Q ss_pred HHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 319 MLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 319 ~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.+.+.|.|+.++..+.+++.+.++|.++++++
T Consensus 294 ~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~ 325 (350)
T cd03785 294 ALVKAGAAVLIPQEELTPERLAAALLELLSDP 325 (350)
T ss_pred HHHhCCCEEEEecCCCCHHHHHHHHHHHhcCH
Confidence 99999999999876556789999999998754
No 52
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=99.81 E-value=1.2e-17 Score=195.01 Aligned_cols=329 Identities=15% Similarity=0.155 Sum_probs=188.2
Q ss_pred ccCCCcccHHHHHHHHHHHH-HCCCcEEEEeCCCC--cccccccCCCceeeeeecc-cC-CcccccccccChHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLI-SAGHDVHVVTGAPD--FVFTSEIQSPRLFIRKVLL-DC-GAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~-~~GheV~~~~~~~~--~~~~~~i~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~ 96 (992)
++.++.||++|.+.||+.|. .+|+.|||++.... .+.......+.+.+..... ++ |+.... .+. ...+.
T Consensus 11 ~P~paqGHi~P~l~LAk~La~~~g~~vT~v~t~~n~~~~~~~~~~~~~i~~~~lp~p~~~glp~~~---~~~---~~~~~ 84 (481)
T PLN02992 11 FSSPGMGHVIPVIELGKRLSANHGFHVTVFVLETDAASAQSKFLNSTGVDIVGLPSPDISGLVDPS---AHV---VTKIG 84 (481)
T ss_pred eCCcccchHHHHHHHHHHHHhCCCcEEEEEeCCCchhhhhhccccCCCceEEECCCccccCCCCCC---ccH---HHHHH
Confidence 68899999999999999998 68999999976532 1111111111222221110 00 111000 011 11111
Q ss_pred HHhhccHHHhHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCchh-H-HHHHH---------------
Q 001947 97 ETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD-F-IYAEY--------------- 156 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~--~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~~-~-~~~~~--------------- 156 (992)
.. .........++|++ .+|++||+|. .+|+..+|+.+|||.+.+...+.. . .+..+
T Consensus 85 ~~----~~~~~~~~~~~l~~~~~~p~cvV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~ 160 (481)
T PLN02992 85 VI----MREAVPTLRSKIAEMHQKPTALIVDLFGTDALCLGGEFNMLTYIFIASNARFLGVSIYYPTLDKDIKEEHTVQR 160 (481)
T ss_pred HH----HHHhHHHHHHHHHhcCCCCeEEEECCcchhHHHHHHHcCCCEEEEecCcHHHHHHHHhhhhhccccccccccCC
Confidence 11 11122333455554 3789999997 789999999999999987332210 0 00000
Q ss_pred ----Hhhhcc-ch-H--------------HHHHHHHhhccccceeeecCCCCC-------CCC--------CCceeecCc
Q 001947 157 ----VMAAGH-HH-R--------------SIVWQIAEDYSHCEFLIRLPGYCP-------MPA--------FRDVIDVPL 201 (992)
Q Consensus 157 ----~~~~~~-~~-~--------------~i~~~l~~~y~~~d~ll~~~~~~~-------~p~--------~~~v~~vp~ 201 (992)
++..+. .. + .+..+. ..+..++.++--++... +.. .+.+..|||
T Consensus 161 ~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~a~gvlvNTf~eLE~~~l~~l~~~~~~~~~~~~~v~~VGP 239 (481)
T PLN02992 161 KPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHG-LAYPKADGILVNTWEEMEPKSLKSLQDPKLLGRVARVPVYPIGP 239 (481)
T ss_pred CCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHH-HhcccCCEEEEechHHHhHHHHHHHhhccccccccCCceEEecC
Confidence 000000 00 0 000011 11223333332111100 000 134778888
Q ss_pred cccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCC--CCcEEEEe----CC-------------
Q 001947 202 VVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLP--SGWKCLVC----GA------------- 255 (992)
Q Consensus 202 ~~~~--~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~--~~~~~Vv~----G~------------- 255 (992)
+... ......++.+||+-.+.+.+|||||||...- .++...|.. ..+.+++- |.
T Consensus 240 l~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~ 319 (481)
T PLN02992 240 LCRPIQSSKTDHPVLDWLNKQPNESVLYISFGSGGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGET 319 (481)
T ss_pred ccCCcCCCcchHHHHHHHHcCCCCceEEEeecccccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCccccc
Confidence 7542 1112235778888666778999999998652 133334433 33344442 11
Q ss_pred CC--CC-CCCC---------eEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH
Q 001947 256 SD--SQ-LPPN---------FIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (992)
Q Consensus 256 ~~--~~-l~~n---------v~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~ 319 (992)
.. .+ +|+| +.+.+ |+| ++|++.. +||||||+||++|++++|||||++| .+.||+.||++
T Consensus 320 ~~~~~~~lp~~f~eR~~~rg~vv~~---W~PQ~~iL~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P--~~~DQ~~na~~ 394 (481)
T PLN02992 320 RDNTPEYLPEGFVSRTHDRGFVVPS---WAPQAEILAHQAVGGFLTHCGWSSTLESVVGGVPMIAWP--LFAEQNMNAAL 394 (481)
T ss_pred ccchhhhCCHHHHHHhcCCCEEEee---cCCHHHHhCCcccCeeEecCchhHHHHHHHcCCCEEecC--ccchhHHHHHH
Confidence 01 11 4543 66654 565 7888755 6999999999999999999999999 78899999999
Q ss_pred H-HHcCcEEEEecC--CCChhhHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 001947 320 L-EFYQGGVEMIRR--DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (992)
Q Consensus 320 l-e~~G~Gi~v~~~--~~~~~~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~ 371 (992)
+ ++.|+|+.++.. .++.+.+..+|.+++.++ .....++-++.+.+.+
T Consensus 395 ~~~~~g~gv~~~~~~~~~~~~~l~~av~~vm~~~-----~g~~~r~~a~~~~~~a 444 (481)
T PLN02992 395 LSDELGIAVRSDDPKEVISRSKIEALVRKVMVEE-----EGEEMRRKVKKLRDTA 444 (481)
T ss_pred HHHHhCeeEEecCCCCcccHHHHHHHHHHHhcCC-----chHHHHHHHHHHHHHH
Confidence 9 599999999763 478899999999999753 1223444444554443
No 53
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.81 E-value=1.6e-18 Score=200.23 Aligned_cols=242 Identities=18% Similarity=0.126 Sum_probs=157.4
Q ss_pred HHHHHHHHcCCCcEEEECCCc----hHHHHHHH-----cCCcEEEE-ecCc-----hhHH-HHHHHhhhccchHHHHHHH
Q 001947 108 KDEVEWLNSIKADLVVSDVVP----VACRAAAD-----AGIRSVCV-TNFS-----WDFI-YAEYVMAAGHHHRSIVWQI 171 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~~----~a~~aA~~-----~gIP~v~i-s~~~-----~~~~-~~~~~~~~~~~~~~i~~~l 171 (992)
....++|++++||+||++++. .+..++.. .++|++++ +++. |... ...++.. .....+.+
T Consensus 90 ~~l~~~i~~~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~~~w~~~~~d~~~~~----s~~~~~~l 165 (382)
T PLN02605 90 REVAKGLMKYKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCHPTWFHKGVTRCFCP----SEEVAKRA 165 (382)
T ss_pred HHHHHHHHhcCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcCcccccCCCCEEEEC----CHHHHHHH
Confidence 455678999999999997744 22333332 37998865 6652 2100 0111110 11222222
Q ss_pred HhhccccceeeecCCCCCCCCCCceeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHHHhh---C
Q 001947 172 AEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKEEY---L 244 (992)
Q Consensus 172 ~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~~--~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll~~l---~ 244 (992)
.+.....+. ..++++|+.... +...+.++++.+++++++++|++++|+.+.. ..+++.+ .
T Consensus 166 ~~~g~~~~k-------------i~v~g~~v~~~f~~~~~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~ 232 (382)
T PLN02605 166 LKRGLEPSQ-------------IRVYGLPIRPSFARAVRPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSL 232 (382)
T ss_pred HHcCCCHHH-------------EEEECcccCHhhccCCCCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhh
Confidence 222111111 123344432221 1234567889999998999998888877764 2333332 2
Q ss_pred ------CCCc-EEEEeCCCCC--C------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC
Q 001947 245 ------PSGW-KCLVCGASDS--Q------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY 309 (992)
Q Consensus 245 ------~~~~-~~Vv~G~~~~--~------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~ 309 (992)
..++ .++++|.+.. + ...++++.||+++++++|++||++|+++|.+|++|||++|+|+|+.+...
T Consensus 233 ~~~~~~~~~~~~~vi~G~~~~~~~~L~~~~~~~~v~~~G~~~~~~~l~~aaDv~V~~~g~~ti~EAma~g~PvI~~~~~p 312 (382)
T PLN02605 233 YDKNLGKPIGQVVVICGRNKKLQSKLESRDWKIPVKVRGFVTNMEEWMGACDCIITKAGPGTIAEALIRGLPIILNGYIP 312 (382)
T ss_pred ccccccCCCceEEEEECCCHHHHHHHHhhcccCCeEEEeccccHHHHHHhCCEEEECCCcchHHHHHHcCCCEEEecCCC
Confidence 2334 4678887632 1 23468899999999999999999999999999999999999999998655
Q ss_pred CCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhC-CCCc---------cCCCCHHHHHHHHHHHHH
Q 001947 310 FNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL-KPCY---------EGGINGGEVAAHILQETA 371 (992)
Q Consensus 310 ~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~-~~~~---------~~~~~G~~~aA~~I~~~~ 371 (992)
.+|. .|+..+.+.|.|+.+. +++.+.++|.+++++ +... ...+++++++++.|.+.+
T Consensus 313 gqe~-gn~~~i~~~g~g~~~~----~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~ 379 (382)
T PLN02605 313 GQEE-GNVPYVVDNGFGAFSE----SPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELV 379 (382)
T ss_pred ccch-hhHHHHHhCCceeecC----CHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHh
Confidence 4444 7999999999998652 367889999999876 4321 146777888888887654
No 54
>PLN02562 UDP-glycosyltransferase
Probab=99.80 E-value=9.2e-18 Score=196.23 Aligned_cols=315 Identities=11% Similarity=0.095 Sum_probs=179.9
Q ss_pred ccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC-CCceeeeeecccCCcccccccccChHHH
Q 001947 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-SPRLFIRKVLLDCGAVQADALTVDRLAS 91 (992)
Q Consensus 14 ~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 91 (992)
+|+.+ ++.++.||++|.+.||+.|..+|+.|+|++..... .....+. .+.+.+... ..|.. +....+
T Consensus 7 ~HVVl---vPfPaqGHi~PmL~LAk~Las~G~~VT~vtt~~~~~~~~~~~~~~~~i~~v~l--p~g~~--~~~~~~---- 75 (448)
T PLN02562 7 PKIIL---VPYPAQGHVTPMLKLASAFLSRGFEPVVITPEFIHRRISATLDPKLGITFMSI--SDGQD--DDPPRD---- 75 (448)
T ss_pred cEEEE---EcCccccCHHHHHHHHHHHHhCCCEEEEEeCcchhhhhhhccCCCCCEEEEEC--CCCCC--CCcccc----
Confidence 35555 68899999999999999999999999999865311 1111111 012333221 11221 110111
Q ss_pred HHHHHHHhhccHHHhHHHHHHHHHcC---CC-cEEEECC-CchHHHHHHHcCCcEEEEecCchh--HHHH---H-----H
Q 001947 92 LEKYSETAVAPRKSILKDEVEWLNSI---KA-DLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYA---E-----Y 156 (992)
Q Consensus 92 ~~~~~~~~~~~~~~~l~~~~~~L~~~---kP-DlVVsD~-~~~a~~aA~~~gIP~v~is~~~~~--~~~~---~-----~ 156 (992)
+..+...+... +.....+++++. .| ++||+|. .+|+..+|+.+|||.+.+...+.. ..+. . +
T Consensus 76 ~~~l~~a~~~~---~~~~l~~ll~~l~~~~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~a~~~~~~~~~~~~~~~~~ 152 (448)
T PLN02562 76 FFSIENSMENT---MPPQLERLLHKLDEDGEVACMVVDLLASWAIGVADRCGVPVAGFWPVMLAAYRLIQAIPELVRTGL 152 (448)
T ss_pred HHHHHHHHHHh---chHHHHHHHHHhcCCCCcEEEEECCccHhHHHHHHHhCCCEEEEechhHHHHHHHHHHHHHhhccc
Confidence 11122111101 112223344432 23 8999997 789999999999999887322210 0000 0 0
Q ss_pred ---------------Hhhhcc----ch----------HHHHHHHH---hhccccceeeecCCCC-------------CCC
Q 001947 157 ---------------VMAAGH----HH----------RSIVWQIA---EDYSHCEFLIRLPGYC-------------PMP 191 (992)
Q Consensus 157 ---------------~~~~~~----~~----------~~i~~~l~---~~y~~~d~ll~~~~~~-------------~~p 191 (992)
++..+. .. ......+. .....++.++.-++.. +.+
T Consensus 153 ~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~ 232 (448)
T PLN02562 153 ISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSFKDEEYDDVKNHQASYNNG 232 (448)
T ss_pred cccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcChhhhCHHHHHHHHhhhccc
Confidence 000000 00 00011111 1111222222211110 112
Q ss_pred CCCceeecCcccccCC-----C----ChHHHHHHhCCCCCCcEEEEEcCCCCC--hh----hHHHhhCCCCcEEEE-eCC
Q 001947 192 AFRDVIDVPLVVRRLH-----K----SRKEVRKELGIEDDVKLLILNFGGQPA--GW----KLKEEYLPSGWKCLV-CGA 255 (992)
Q Consensus 192 ~~~~v~~vp~~~~~~~-----~----~r~e~r~~l~~~~d~~~Vlvs~Gg~~~--~~----~ll~~l~~~~~~~Vv-~G~ 255 (992)
..+++..|||+..... . ...++.+|++-.+.+.+|||+|||... .. +++..+...+..|++ ...
T Consensus 233 ~~~~v~~iGpl~~~~~~~~~~~~~~~~~~~c~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~l~~~l~~~g~~fiW~~~~ 312 (448)
T PLN02562 233 QNPQILQIGPLHNQEATTITKPSFWEEDMSCLGWLQEQKPNSVIYISFGSWVSPIGESNVRTLALALEASGRPFIWVLNP 312 (448)
T ss_pred cCCCEEEecCcccccccccCCCccccchHHHHHHHhcCCCCceEEEEecccccCCCHHHHHHHHHHHHHCCCCEEEEEcC
Confidence 2356788888753210 1 112455788766667899999999652 22 233344444444332 221
Q ss_pred C----CCC-----CCCCeEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH
Q 001947 256 S----DSQ-----LPPNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (992)
Q Consensus 256 ~----~~~-----l~~nv~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~ 322 (992)
. -++ +++|+.+.+ |+| ++|++ +.+||||||+||++|++++|||+|++| .+.||+.||+++++
T Consensus 313 ~~~~~l~~~~~~~~~~~~~v~~---w~PQ~~iL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~~~ 387 (448)
T PLN02562 313 VWREGLPPGYVERVSKQGKVVS---WAPQLEVLKHQAVGCYLTHCGWNSTMEAIQCQKRLLCYP--VAGDQFVNCAYIVD 387 (448)
T ss_pred CchhhCCHHHHHHhccCEEEEe---cCCHHHHhCCCccceEEecCcchhHHHHHHcCCCEEeCC--cccchHHHHHHHHH
Confidence 1 111 356777765 666 78877 558999999999999999999999999 68899999999986
Q ss_pred -cCcEEEEecCCCChhhHHHHHHHHhhC
Q 001947 323 -YQGGVEMIRRDLLTGHWKPYLERAISL 349 (992)
Q Consensus 323 -~G~Gi~v~~~~~~~~~l~~al~~ll~~ 349 (992)
.|+|+.+. +++.+++.++|++++.+
T Consensus 388 ~~g~g~~~~--~~~~~~l~~~v~~~l~~ 413 (448)
T PLN02562 388 VWKIGVRIS--GFGQKEVEEGLRKVMED 413 (448)
T ss_pred HhCceeEeC--CCCHHHHHHHHHHHhCC
Confidence 58887774 57789999999999964
No 55
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=99.80 E-value=2.3e-17 Score=193.75 Aligned_cols=349 Identities=14% Similarity=0.132 Sum_probs=192.9
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-cccccc-CCCceeeeeecc--cCCcccccccc-c-ChH-HHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEI-QSPRLFIRKVLL--DCGAVQADALT-V-DRL-ASLEK 94 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i-~~~~~~~~~~~~--~~g~~~~~~~~-~-~~~-~~~~~ 94 (992)
++.++.||++|.+.||+.|..+|+.|||++..... ...... ..+.+.+..... ..++. ++.. . +.. .....
T Consensus 15 ~PfpaqGHi~P~l~LAk~La~~G~~VTfv~T~~n~~~~~~~~~~~~~i~~~~lp~P~~~~lP--dG~~~~~~~~~~~~~~ 92 (477)
T PLN02863 15 FPFPAQGHMIPLLDLTHRLALRGLTITVLVTPKNLPFLNPLLSKHPSIETLVLPFPSHPSIP--SGVENVKDLPPSGFPL 92 (477)
T ss_pred ecCcccchHHHHHHHHHHHHhCCCEEEEEeCCCcHHHHhhhcccCCCeeEEeCCCCCcCCCC--CCCcChhhcchhhHHH
Confidence 68899999999999999999999999999765311 111111 011122211100 01111 1100 0 100 00111
Q ss_pred HHHHhhccHHHhHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCc---hh---HHHHHH---------
Q 001947 95 YSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS---WD---FIYAEY--------- 156 (992)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~~L~~--~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~---~~---~~~~~~--------- 156 (992)
+.. ..........++|++ .+|++||+|. .+|+..+|+.+|||.+.+...+ .. .+....
T Consensus 93 ~~~----a~~~~~~~~~~~l~~~~~~p~cvI~D~f~~Wa~dVA~e~GIP~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~ 168 (477)
T PLN02863 93 MIH----ALGELYAPLLSWFRSHPSPPVAIISDMFLGWTQNLACQLGIRRFVFSPSGAMALSIMYSLWREMPTKINPDDQ 168 (477)
T ss_pred HHH----HHHHhHHHHHHHHHhCCCCCeEEEEcCchHhHHHHHHHcCCCEEEEeccCHHHHHHHHHHhhccccccccccc
Confidence 111 111223334455554 3679999997 8899999999999999873322 11 110000
Q ss_pred --------Hhhhcc-ch-------------HHHHHHHHhh---ccccceeeecCCCCC-------C-CCC--CceeecCc
Q 001947 157 --------VMAAGH-HH-------------RSIVWQIAED---YSHCEFLIRLPGYCP-------M-PAF--RDVIDVPL 201 (992)
Q Consensus 157 --------~~~~~~-~~-------------~~i~~~l~~~---y~~~d~ll~~~~~~~-------~-p~~--~~v~~vp~ 201 (992)
++..+. .. +.....+.+. ...++.++--++... + ..+ +++..|||
T Consensus 169 ~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGP 248 (477)
T PLN02863 169 NEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASWGLVVNSFTELEGIYLEHLKKELGHDRVWAVGP 248 (477)
T ss_pred ccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCCEEEEecHHHHHHHHHHHHHhhcCCCCeEEeCC
Confidence 000000 00 0001111111 111221221111100 0 111 35778888
Q ss_pred ccccC--C-----------CChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEEEE-eCCC-C----
Q 001947 202 VVRRL--H-----------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLV-CGAS-D---- 257 (992)
Q Consensus 202 ~~~~~--~-----------~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~Vv-~G~~-~---- 257 (992)
+.... . ...+++.+|++..+++++|||+|||.... .+++..|...++.|++ .+.. .
T Consensus 249 L~~~~~~~~~~~~~~~~~~~~~~~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~ 328 (477)
T PLN02863 249 ILPLSGEKSGLMERGGPSSVSVDDVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESD 328 (477)
T ss_pred CcccccccccccccCCcccccHHHHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccc
Confidence 74311 0 01346778888777789999999998652 2344455555555443 3421 1
Q ss_pred C-CCCC---------CeEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-H
Q 001947 258 S-QLPP---------NFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-F 322 (992)
Q Consensus 258 ~-~l~~---------nv~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~ 322 (992)
. .+|. |+++.+ |+| ++|++ +++||||||+||++|++++|||+|++| .+.||+.||+++. +
T Consensus 329 ~~~lp~~~~~r~~~~g~~v~~---w~PQ~~vL~h~~v~~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~v~~~ 403 (477)
T PLN02863 329 YSNIPSGFEDRVAGRGLVIRG---WAPQVAILSHRAVGAFLTHCGWNSVLEGLVAGVPMLAWP--MAADQFVNASLLVDE 403 (477)
T ss_pred hhhCCHHHHHHhccCCEEecC---CCCHHHHhcCCCcCeEEecCCchHHHHHHHcCCCEEeCC--ccccchhhHHHHHHh
Confidence 0 1444 455554 555 68876 899999999999999999999999999 6889999999975 5
Q ss_pred cCcEEEEecC---CCChhhHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCCCCccchhhHh
Q 001947 323 YQGGVEMIRR---DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRLRDA 390 (992)
Q Consensus 323 ~G~Gi~v~~~---~~~~~~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~Lr~a 390 (992)
.|+|+.+... ..+.+++..++.+++.. ....++-|+.+.+.+. ++..+..+....|..-
T Consensus 404 ~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~-------~~~~r~~a~~l~e~a~--~Av~~gGSS~~~l~~~ 465 (477)
T PLN02863 404 LKVAVRVCEGADTVPDSDELARVFMESVSE-------NQVERERAKELRRAAL--DAIKERGSSVKDLDGF 465 (477)
T ss_pred hceeEEeccCCCCCcCHHHHHHHHHHHhhc-------cHHHHHHHHHHHHHHH--HHhccCCcHHHHHHHH
Confidence 7999999542 24678888999988742 1334444444444432 2223444445555443
No 56
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.80 E-value=8.9e-18 Score=187.27 Aligned_cols=285 Identities=14% Similarity=0.118 Sum_probs=181.8
Q ss_pred EEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCC
Q 001947 499 ARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNR 573 (992)
Q Consensus 499 ~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~ 573 (992)
..||+||||+ |..-| ||.-..+-++|+++-++.+.+.+.. .+.+...
T Consensus 3 ~~a~aKiNl~L~i~~kr~dgyH~l~s~~~ai~l~d~v~i~~~~~~---------------------~i~~~~~------- 54 (300)
T PRK03188 3 VRAPAKVNLHLGVGPLRDDGYHELATVFQAVSLYDEVTVTAADVL---------------------SVEVSGE------- 54 (300)
T ss_pred EeecceEEEeeccCCcCCCCccchHhhheehhhccEEEEEECCCc---------------------EEEEecC-------
Confidence 4799999987 54544 8888888899999999999875321 1111100
Q ss_pred CCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHH
Q 001947 574 GPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEV 653 (992)
Q Consensus 574 ~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~v 653 (992)
....+ | ..-.|.++.++..++++.+.. ++++|.|.|+||+++|||||||.++
T Consensus 55 ------~~~~~-----~---------------~~~~nl~~~~~~~~~~~~~~~--~~~~I~i~s~IP~~~GLGSSSA~a~ 106 (300)
T PRK03188 55 ------GADQV-----P---------------TDESNLAWRAAELLAEHVGRA--PDVHLHIDKGIPVAGGMAGGSADAA 106 (300)
T ss_pred ------CccCC-----C---------------CCCccHHHHHHHHHHHHhCCC--CCeEEEEEcCCcccCcchHHHHHHH
Confidence 00000 0 011566677777777777754 6899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCC
Q 001947 654 ASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGI 733 (992)
Q Consensus 654 a~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi 733 (992)
|++.|++.++|.++++++|+++|.++| .|..++++||. ++...+. +....+..+.++.++++..+.
T Consensus 107 A~l~al~~~~g~~ls~~el~~~a~~ig----------~dv~~~~~GG~---~~~~~~g-~~~~~~~~~~~~~~~lv~p~~ 172 (300)
T PRK03188 107 AALVACDALWGLGLSRDELLELAAELG----------SDVPFALLGGT---ALGTGRG-EQLAPVLARGTFHWVLAFADG 172 (300)
T ss_pred HHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcchhhcCCe---EEEEecC-CEEEECCCCCCcEEEEEeCCC
Confidence 999999999999999999999999864 36668899984 4443333 222344444455555543322
Q ss_pred ccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCC
Q 001947 734 RHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIP 813 (992)
Q Consensus 734 ~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp 813 (992)
.-+|.. .|+ .+|
T Consensus 173 ~~sT~~-~~~-------------------------------------------------------------------~l~ 184 (300)
T PRK03188 173 GLSTPA-VFR-------------------------------------------------------------------ELD 184 (300)
T ss_pred CCCHHH-HHH-------------------------------------------------------------------hch
Confidence 112110 000 010
Q ss_pred ccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCC
Q 001947 814 ESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLG 893 (992)
Q Consensus 814 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs 893 (992)
+.. +. ..+....++..+..++.++ |++.+|++|+..-+.++-. .
T Consensus 185 ~~~-----------------------------~~-~~~~~~~~~~~~~~al~~~----d~~~l~~~~~n~le~~~~~--~ 228 (300)
T PRK03188 185 RLR-----------------------------EA-GDPPRLGEPDPLLAALRAG----DPAQLAPLLGNDLQAAALS--L 228 (300)
T ss_pred hhh-----------------------------cc-ccccccccHHHHHHHHHcC----CHHHHHHHhhCcCHHHHHH--h
Confidence 000 00 0000012356788888886 9999999996432333222 4
Q ss_pred CchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCC
Q 001947 894 SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSP 971 (992)
Q Consensus 894 ~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~ 971 (992)
+|+++++++.+++ .|++|++|||+| .|++++.++.. ..+++.+...+ .|....++.. ...
T Consensus 229 ~p~l~~l~~~~~~-----------~Galga~lSGsG--~tv~~l~~~~~----~~~~~~~~l~~-~g~~~~~~~~~~~~~ 290 (300)
T PRK03188 229 RPSLRRTLRAGEE-----------AGALAGIVSGSG--PTCAFLCADAD----SAVDVAAALSG-AGVCRTVRVATGPVP 290 (300)
T ss_pred CchHHHHHHHHHH-----------CCCCEEEEEccc--cceEEEeCCHH----HHHHHHHHHHh-cCcceeEEEeecccc
Confidence 9999999999987 689999999988 66776665422 23445545543 3555566663 355
Q ss_pred CCce
Q 001947 972 GAGK 975 (992)
Q Consensus 972 Ga~~ 975 (992)
|+++
T Consensus 291 ~~~~ 294 (300)
T PRK03188 291 GARV 294 (300)
T ss_pred ceEe
Confidence 5544
No 57
>PLN03004 UDP-glycosyltransferase
Probab=99.79 E-value=5.8e-17 Score=188.42 Aligned_cols=151 Identities=15% Similarity=0.202 Sum_probs=109.1
Q ss_pred CceeecCcccccCC---C-C--hHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEE--EEeCCC----
Q 001947 194 RDVIDVPLVVRRLH---K-S--RKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKC--LVCGAS---- 256 (992)
Q Consensus 194 ~~v~~vp~~~~~~~---~-~--r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~--Vv~G~~---- 256 (992)
+++..|||+..... . . ..++.+|++-.+++.+|||||||...- . ++...|...+..| ++-...
T Consensus 235 ~~v~~vGPl~~~~~~~~~~~~~~~~c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~~~FlW~~r~~~~~~~ 314 (451)
T PLN03004 235 RNIYPIGPLIVNGRIEDRNDNKAVSCLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSGQRFLWVVRNPPELEK 314 (451)
T ss_pred CCEEEEeeeccCccccccccchhhHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCccccc
Confidence 35778888753111 1 1 134668888777788999999998652 2 3333444333333 333221
Q ss_pred ----CCC-CC---------CCeEEcCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHH
Q 001947 257 ----DSQ-LP---------PNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRN 318 (992)
Q Consensus 257 ----~~~-l~---------~nv~v~~f~~~~p--~lL~aaDl--vIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~ 318 (992)
... +| .|+.+.+ |+| ++|+++++ ||||||+||++|++++|||||++| .+.||+.||+
T Consensus 315 ~~~~~~~~lp~gf~er~~~~g~~v~~---W~PQ~~iL~H~~v~~FvTH~G~nS~lEal~~GVP~v~~P--~~~DQ~~na~ 389 (451)
T PLN03004 315 TELDLKSLLPEGFLSRTEDKGMVVKS---WAPQVPVLNHKAVGGFVTHCGWNSILEAVCAGVPMVAWP--LYAEQRFNRV 389 (451)
T ss_pred cccchhhhCChHHHHhccCCcEEEEe---eCCHHHHhCCCccceEeccCcchHHHHHHHcCCCEEecc--ccccchhhHH
Confidence 111 44 5676665 566 79998887 999999999999999999999999 6889999999
Q ss_pred HHHH-cCcEEEEecC---CCChhhHHHHHHHHhhC
Q 001947 319 MLEF-YQGGVEMIRR---DLLTGHWKPYLERAISL 349 (992)
Q Consensus 319 ~le~-~G~Gi~v~~~---~~~~~~l~~al~~ll~~ 349 (992)
++++ .|+|+.++.+ .++.+.+.++|++++.+
T Consensus 390 ~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~ 424 (451)
T PLN03004 390 MIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE 424 (451)
T ss_pred HHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC
Confidence 9975 6999999753 46889999999999964
No 58
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.79 E-value=1.1e-17 Score=193.97 Aligned_cols=243 Identities=16% Similarity=0.124 Sum_probs=157.8
Q ss_pred HHHHHHHHcCCCcEEEECCCchHHHHH---HHcCCcEEEE-ecCc----hhHHH-HHHHhhhccchHHHHHHHHhhcccc
Q 001947 108 KDEVEWLNSIKADLVVSDVVPVACRAA---ADAGIRSVCV-TNFS----WDFIY-AEYVMAAGHHHRSIVWQIAEDYSHC 178 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~~~a~~aA---~~~gIP~v~i-s~~~----~~~~~-~~~~~~~~~~~~~i~~~l~~~y~~~ 178 (992)
....++|++++||+||++++....... ...++|++.+ +++. |...+ ..++.. .+...+.+.+.....
T Consensus 94 ~~l~~~l~~~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~~w~~~~~d~~~v~----s~~~~~~l~~~gi~~ 169 (391)
T PRK13608 94 NKLINLLIKEKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHKNWITPYSTRYYVA----TKETKQDFIDVGIDP 169 (391)
T ss_pred HHHHHHHHHhCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCcccccccCCCCEEEEC----CHHHHHHHHHcCCCH
Confidence 466788999999999998765433222 2358998766 5653 21100 011110 111222222111111
Q ss_pred ceeeecCCCCCCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCC-h--hhHHHhhC--CCCcEE-E
Q 001947 179 EFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPA-G--WKLKEEYL--PSGWKC-L 251 (992)
Q Consensus 179 d~ll~~~~~~~~p~~~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~-~--~~ll~~l~--~~~~~~-V 251 (992)
+ ...++++|+.... ....+.++++.+++++++++|+++.|+.+. . ..+++.+. .+++++ +
T Consensus 170 ~-------------ki~v~GiPv~~~f~~~~~~~~~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~~~~~~~vv 236 (391)
T PRK13608 170 S-------------TVKVTGIPIDNKFETPIDQKQWLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAKSANAQVVM 236 (391)
T ss_pred H-------------HEEEECeecChHhcccccHHHHHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhcCCCceEEE
Confidence 1 1123444443221 122345677888998888999999998885 2 23444432 235655 4
Q ss_pred EeCCCCC---C------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH
Q 001947 252 VCGASDS---Q------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF 322 (992)
Q Consensus 252 v~G~~~~---~------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~ 322 (992)
++|.+.. . ..+++.+.+|+++++++|++||++|+++|..|++||+++|+|+|++...+. +|..|+..+++
T Consensus 237 v~G~~~~l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~aDl~I~k~gg~tl~EA~a~G~PvI~~~~~pg-qe~~N~~~~~~ 315 (391)
T PRK13608 237 ICGKSKELKRSLTAKFKSNENVLILGYTKHMNEWMASSQLMITKPGGITISEGLARCIPMIFLNPAPG-QELENALYFEE 315 (391)
T ss_pred EcCCCHHHHHHHHHHhccCCCeEEEeccchHHHHHHhhhEEEeCCchHHHHHHHHhCCCEEECCCCCC-cchhHHHHHHh
Confidence 6786532 1 245789999999999999999999999999999999999999999843223 34589999999
Q ss_pred cCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHHc
Q 001947 323 YQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (992)
Q Consensus 323 ~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~~~~ 372 (992)
.|+|+... +++.+.++|.++++++.... ...++.+++++.+++.+.
T Consensus 316 ~G~g~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~ 370 (391)
T PRK13608 316 KGFGKIAD----TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIG 370 (391)
T ss_pred CCcEEEeC----CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhh
Confidence 99998764 35778899999987664321 456888888888887763
No 59
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.78 E-value=8.2e-18 Score=194.35 Aligned_cols=325 Identities=14% Similarity=0.073 Sum_probs=187.1
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCccc---ccccCC---CceeeeeecccCCcccccccccChH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVF---TSEIQS---PRLFIRKVLLDCGAVQADALTVDRL 89 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~---~~~i~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (992)
++|+++..+.|.||..++.+|+++|+++||+|++++..-.... ...... ..+.+.+..+. +...........
T Consensus 5 ~rili~t~~~G~GH~~~a~al~~~l~~~g~~~~~~~d~~~~~~~~~~~~~~~~y~~~~~~~~~~~~--~~~~~~~~~~~~ 82 (380)
T PRK13609 5 PKVLILTAHYGNGHVQVAKTLEQTFRQKGIKDVIVCDLFGESHPVITEITKYLYLKSYTIGKELYR--LFYYGVEKIYDK 82 (380)
T ss_pred CeEEEEEcCCCchHHHHHHHHHHHHHhcCCCcEEEEEhHHhcchHHHHHHHHHHHHHHHHhHHHHH--HHHhccCcccch
Confidence 3555677888999999999999999999998766644211110 000000 00000000000 000000000000
Q ss_pred HHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHH---HHcCCcEEEE-ecCchh--HHHH---HHHhhh
Q 001947 90 ASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAA---ADAGIRSVCV-TNFSWD--FIYA---EYVMAA 160 (992)
Q Consensus 90 ~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA---~~~gIP~v~i-s~~~~~--~~~~---~~~~~~ 160 (992)
... . ++ .........+++++++||+||++++..+...+ ...++|++.+ +++... ..+. .++.
T Consensus 83 ~~~-~---~~---~~~~~~~l~~~l~~~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~~~~~~~ad~i~~-- 153 (380)
T PRK13609 83 KIF-S---WY---ANFGRKRLKLLLQAEKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHKIWVHREVDRYFV-- 153 (380)
T ss_pred HHH-H---HH---HHHHHHHHHHHHHHhCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCcccccCCCCEEEE--
Confidence 000 0 10 01123556788999999999998754443322 2356998754 444310 0010 0000
Q ss_pred ccchHHHHHHHHhhccccceeeecCCCCCCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh---
Q 001947 161 GHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--- 236 (992)
Q Consensus 161 ~~~~~~i~~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--- 236 (992)
..+...+.+.+.... +....++++|..... ....+...++.+++++++++|+++.|+.+..
T Consensus 154 --~s~~~~~~l~~~gi~-------------~~ki~v~G~p~~~~f~~~~~~~~~~~~~~l~~~~~~il~~~G~~~~~k~~ 218 (380)
T PRK13609 154 --ATDHVKKVLVDIGVP-------------PEQVVETGIPIRSSFELKINPDIIYNKYQLCPNKKILLIMAGAHGVLGNV 218 (380)
T ss_pred --CCHHHHHHHHHcCCC-------------hhHEEEECcccChHHcCcCCHHHHHHHcCCCCCCcEEEEEcCCCCCCcCH
Confidence 011122222211100 011122334432211 1123446778889988888888888887752
Q ss_pred hhHHHhhCC-CCcEEE-EeCCCCC---C-------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 001947 237 WKLKEEYLP-SGWKCL-VCGASDS---Q-------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (992)
Q Consensus 237 ~~ll~~l~~-~~~~~V-v~G~~~~---~-------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~ 304 (992)
..+++.+.. ++++++ ++|.+.. . .+.|+++.+|+++++++|++||++|+++|..|+.||+++|+|+|+
T Consensus 219 ~~li~~l~~~~~~~~viv~G~~~~~~~~l~~~~~~~~~~v~~~g~~~~~~~l~~~aD~~v~~~gg~t~~EA~a~g~PvI~ 298 (380)
T PRK13609 219 KELCQSLMSVPDLQVVVVCGKNEALKQSLEDLQETNPDALKVFGYVENIDELFRVTSCMITKPGGITLSEAAALGVPVIL 298 (380)
T ss_pred HHHHHHHhhCCCcEEEEEeCCCHHHHHHHHHHHhcCCCcEEEEechhhHHHHHHhccEEEeCCCchHHHHHHHhCCCEEE
Confidence 234444432 456655 4575421 1 345899999999999999999999999998999999999999998
Q ss_pred EeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHH
Q 001947 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETA 371 (992)
Q Consensus 305 iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~~~ 371 (992)
....+. .+..|+..+++.|+++... +++.+.++|.++++++..+. ...+..+++++.+++.+
T Consensus 299 ~~~~~g-~~~~n~~~~~~~G~~~~~~----~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~ 369 (380)
T PRK13609 299 YKPVPG-QEKENAMYFERKGAAVVIR----DDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAEN 369 (380)
T ss_pred CCCCCC-cchHHHHHHHhCCcEEEEC----CHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhh
Confidence 642222 3457999999999997653 25788999999987654321 35567888888887765
No 60
>PLN02555 limonoid glucosyltransferase
Probab=99.78 E-value=9.2e-17 Score=188.16 Aligned_cols=318 Identities=16% Similarity=0.121 Sum_probs=178.4
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCC-ccccc--cc-----C---CCceeeeeecccCCcccccccccChHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD-FVFTS--EI-----Q---SPRLFIRKVLLDCGAVQADALTVDRLA 90 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~-~~~~~--~i-----~---~~~~~~~~~~~~~g~~~~~~~~~~~~~ 90 (992)
++.++.||++|.+.||+.|..+|..|||++.... ..... .+ . ...+.+... ..|+........+.
T Consensus 13 ~PfpaqGHi~Pml~lA~~La~~G~~vT~v~T~~~~~~~~~a~~~~~~~~~~~~~~~i~~~~~--pdglp~~~~~~~~~-- 88 (480)
T PLN02555 13 VSFPGQGHVNPLLRLGKLLASKGLLVTFVTTESWGKKMRQANKIQDGVLKPVGDGFIRFEFF--EDGWAEDDPRRQDL-- 88 (480)
T ss_pred ECCcccccHHHHHHHHHHHHhCCCeEEEEeccchhhhhhccccccccccccCCCCeEEEeeC--CCCCCCCcccccCH--
Confidence 6889999999999999999999999999977531 11110 00 0 011223221 11322100000111
Q ss_pred HHHHHHHHhhccHHHhHHHHHHHHH-cCCC-cEEEECC-CchHHHHHHHcCCcEEEEecCc-h-hHHHHHH---------
Q 001947 91 SLEKYSETAVAPRKSILKDEVEWLN-SIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS-W-DFIYAEY--------- 156 (992)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~L~-~~kP-DlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~-~~~~~~~--------- 156 (992)
..+...+.......+++.++-+. ..+| ++||+|. .+|+..+|+.+|||.+.+.... . ...+..+
T Consensus 89 --~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~a~~~~~~~~~~~~~~~~~~ 166 (480)
T PLN02555 89 --DLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQSCACFSAYYHYYHGLVPFPT 166 (480)
T ss_pred --HHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeecccHHHHHHHHHHhhcCCCccc
Confidence 11211111011112222222222 1355 9999997 8899999999999998872211 0 0011000
Q ss_pred ---------Hhhhcc----c----------hHHHHHHHHh---hccccceeeecCCCCC-------CCCCCceeecCccc
Q 001947 157 ---------VMAAGH----H----------HRSIVWQIAE---DYSHCEFLIRLPGYCP-------MPAFRDVIDVPLVV 203 (992)
Q Consensus 157 ---------~~~~~~----~----------~~~i~~~l~~---~y~~~d~ll~~~~~~~-------~p~~~~v~~vp~~~ 203 (992)
++..+. . .....+.+.+ ....++.++.-++... +.....+..|||+.
T Consensus 167 ~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~~~~l~~~~~v~~iGPl~ 246 (480)
T PLN02555 167 ETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEKEIIDYMSKLCPIKPVGPLF 246 (480)
T ss_pred ccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhHHHHHHHhhCCCEEEeCccc
Confidence 000000 0 0000111111 1122222222222110 00111267788864
Q ss_pred cc---C-C-------CChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEEEEe-CC----C-C-C-C
Q 001947 204 RR---L-H-------KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLVC-GA----S-D-S-Q 259 (992)
Q Consensus 204 ~~---~-~-------~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~Vv~-G~----~-~-~-~ 259 (992)
.. . . ....++.+|++-.+.+.+|||+|||...- .++...+...+..|++. .. . . . .
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~~l~~~~~~flW~~~~~~~~~~~~~~~ 326 (480)
T PLN02555 247 KMAKTPNSDVKGDISKPADDCIEWLDSKPPSSVVYISFGTVVYLKQEQIDEIAYGVLNSGVSFLWVMRPPHKDSGVEPHV 326 (480)
T ss_pred CccccccccccccccccchhHHHHHhCCCCCceeEEEeccccCCCHHHHHHHHHHHHhcCCeEEEEEecCcccccchhhc
Confidence 31 0 0 11245677887666677999999997652 23333455455554432 21 0 1 0 1
Q ss_pred C--------CCCeEEcCCCCCHH--HHH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcE
Q 001947 260 L--------PPNFIKLPKDAYTP--DFM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGG 326 (992)
Q Consensus 260 l--------~~nv~v~~f~~~~p--~lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~-G~G 326 (992)
+ +.|..+.+ |+| ++| +++.+||||||+||++|++++|+|||++| .+.||+.|++++++. |+|
T Consensus 327 lp~~~~~~~~~~g~v~~---W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~l~~P--~~~DQ~~Na~~~~~~~gvG 401 (480)
T PLN02555 327 LPEEFLEKAGDKGKIVQ---WCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPVVCFP--QWGDQVTDAVYLVDVFKTG 401 (480)
T ss_pred CChhhhhhcCCceEEEe---cCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCEEeCC--CccccHHHHHHHHHHhCce
Confidence 2 34565554 666 678 56999999999999999999999999999 688999999999876 999
Q ss_pred EEEe-----cCCCChhhHHHHHHHHhhCC
Q 001947 327 VEMI-----RRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 327 i~v~-----~~~~~~~~l~~al~~ll~~~ 350 (992)
+.+. ...++.+++..+|++++.++
T Consensus 402 v~l~~~~~~~~~v~~~~v~~~v~~vm~~~ 430 (480)
T PLN02555 402 VRLCRGEAENKLITREEVAECLLEATVGE 430 (480)
T ss_pred EEccCCccccCcCcHHHHHHHHHHHhcCc
Confidence 9994 23567889999999998643
No 61
>PLN02554 UDP-glycosyltransferase family protein
Probab=99.78 E-value=5.1e-17 Score=192.03 Aligned_cols=150 Identities=17% Similarity=0.228 Sum_probs=107.3
Q ss_pred CceeecCcccc--cC-----CCChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEEEEe-CC-C---
Q 001947 194 RDVIDVPLVVR--RL-----HKSRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLVC-GA-S--- 256 (992)
Q Consensus 194 ~~v~~vp~~~~--~~-----~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~Vv~-G~-~--- 256 (992)
+++..|||+.. .. ...+.++.+|++-.+++++|||+|||...- . +++..|...++.|++. .. .
T Consensus 238 ~~v~~vGpl~~~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~ 317 (481)
T PLN02554 238 PPVYPVGPVLHLENSGDDSKDEKQSEILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSGHRFLWSLRRASPNI 317 (481)
T ss_pred CCEEEeCCCccccccccccccccchHHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccc
Confidence 56788988732 11 112356888887666778999999998542 2 3333454445544432 21 0
Q ss_pred ---------C-CC-CCC--------CeEEcCCCCCHH--HHH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCCh
Q 001947 257 ---------D-SQ-LPP--------NFIKLPKDAYTP--DFM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE 313 (992)
Q Consensus 257 ---------~-~~-l~~--------nv~v~~f~~~~p--~lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ 313 (992)
. .. +|+ |..+. .|+| ++| +++++||||||+||++|++++|||||++| .+.||
T Consensus 318 ~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~---~W~PQ~~iL~H~~v~~FvtH~G~nS~~Ea~~~GVP~l~~P--~~~DQ 392 (481)
T PLN02554 318 MKEPPGEFTNLEEILPEGFLDRTKDIGKVI---GWAPQVAVLAKPAIGGFVTHCGWNSILESLWFGVPMAAWP--LYAEQ 392 (481)
T ss_pred cccccccccchhhhCChHHHHHhccCceEE---eeCCHHHHhCCcccCcccccCccchHHHHHHcCCCEEecC--ccccc
Confidence 0 01 343 34344 4777 688 67888999999999999999999999999 68899
Q ss_pred HHHH-HHHHHcCcEEEEec-----------CCCChhhHHHHHHHHhh
Q 001947 314 PFLR-NMLEFYQGGVEMIR-----------RDLLTGHWKPYLERAIS 348 (992)
Q Consensus 314 ~~NA-~~le~~G~Gi~v~~-----------~~~~~~~l~~al~~ll~ 348 (992)
+.|| ..+++.|+|+.+.. ..++.+++.++|++++.
T Consensus 393 ~~Na~~~v~~~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~ 439 (481)
T PLN02554 393 KFNAFEMVEELGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLME 439 (481)
T ss_pred hhhHHHHHHHhCceEEeeccccccccccccCeEcHHHHHHHHHHHhc
Confidence 9999 45789999999863 35788999999999995
No 62
>PLN02207 UDP-glycosyltransferase
Probab=99.78 E-value=9.3e-17 Score=187.30 Aligned_cols=324 Identities=12% Similarity=0.088 Sum_probs=181.4
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCC--CcEEEEeCCCCc--ccccccC-----CCceeeeeecccCCccccc-
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG--HDVHVVTGAPDF--VFTSEIQ-----SPRLFIRKVLLDCGAVQAD- 82 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~G--heV~~~~~~~~~--~~~~~i~-----~~~~~~~~~~~~~g~~~~~- 82 (992)
|++.++++ ++.+|.||++|.+.+|+.|..+| ..|+|++..... .....+. .+.+.+.... .+...+.
T Consensus 1 ~~~~hvv~-~P~p~qGHi~P~l~lA~~La~~gg~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~i~~~~lp--~~~~~~~~ 77 (468)
T PLN02207 1 MRNAELIF-IPTPTVGHLVPFLEFARRLIEQDDRIRITILLMKLQGQSHLDTYVKSIASSQPFVRFIDVP--ELEEKPTL 77 (468)
T ss_pred CCCcEEEE-eCCcchhhHHHHHHHHHHHHhCCCCeEEEEEEcCCCcchhhHHhhhhccCCCCCeEEEEeC--CCCCCCcc
Confidence 45555543 68899999999999999999998 889988654211 1111111 0123332221 0000000
Q ss_pred ccccChHHHHHHHHHHhhccHHHhHHHHHHHHHc----CCC-cEEEECC-CchHHHHHHHcCCcEEEEecCc-hh-HHHH
Q 001947 83 ALTVDRLASLEKYSETAVAPRKSILKDEVEWLNS----IKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYA 154 (992)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~----~kP-DlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~-~~~~ 154 (992)
....+... .+........+.......+++++ .+| ++||+|. .+|+..+|+.+|||.+.+...+ .. ..+.
T Consensus 78 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~~f~~~~a~~~~~~~ 154 (468)
T PLN02207 78 GGTQSVEA---YVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFYVFLTTNSGFLAMMQ 154 (468)
T ss_pred ccccCHHH---HHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEEEEECccHHHHHHHH
Confidence 00011111 11111110101001112333332 245 8999997 8899999999999998873222 10 0000
Q ss_pred HH--------------------Hhhhccc---------------hHHHHHHHHhhccccceeeecCCCC---C-------
Q 001947 155 EY--------------------VMAAGHH---------------HRSIVWQIAEDYSHCEFLIRLPGYC---P------- 189 (992)
Q Consensus 155 ~~--------------------~~~~~~~---------------~~~i~~~l~~~y~~~d~ll~~~~~~---~------- 189 (992)
.+ ++..... ...+.+.+ .....++.++.-++.. +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~-~~~~~~~~vlvNtf~~LE~~~~~~~~~ 233 (468)
T PLN02207 155 YLADRHSKDTSVFVRNSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLA-ILFTKANGILVNSSFDIEPYSVNHFLD 233 (468)
T ss_pred HhhhccccccccCcCCCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHH-HhcccCCEEEEEchHHHhHHHHHHHHh
Confidence 00 0000000 00001111 1122233333211110 0
Q ss_pred CCCCCceeecCccccc-C-CC------ChHHHHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEEE--EeC
Q 001947 190 MPAFRDVIDVPLVVRR-L-HK------SRKEVRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCL--VCG 254 (992)
Q Consensus 190 ~p~~~~v~~vp~~~~~-~-~~------~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~V--v~G 254 (992)
.+..+++..|||+... . .. ..+++.+|++-.+++.+|||||||.... . ++...|...++.|+ +-+
T Consensus 234 ~~~~p~v~~VGPl~~~~~~~~~~~~~~~~~~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~~~flW~~r~ 313 (468)
T PLN02207 234 EQNYPSVYAVGPIFDLKAQPHPEQDLARRDELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQYRFLWSLRT 313 (468)
T ss_pred ccCCCcEEEecCCcccccCCCCccccchhhHHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCCCcEEEEEeC
Confidence 1233568889887541 1 11 1246788888777788999999998652 2 33334544444443 332
Q ss_pred CCC--CC-CC--------CCeEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH
Q 001947 255 ASD--SQ-LP--------PNFIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (992)
Q Consensus 255 ~~~--~~-l~--------~nv~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~ 319 (992)
... .+ +| .|..+. .|+| ++|++ +.+||||||+||++|++++|||||++| .+.||+.||++
T Consensus 314 ~~~~~~~~lp~~f~er~~~~g~i~---~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai~~GVP~l~~P--~~~DQ~~Na~~ 388 (468)
T PLN02207 314 EEVTNDDLLPEGFLDRVSGRGMIC---GWSPQVEILAHKAVGGFVSHCGWNSIVESLWFGVPIVTWP--MYAEQQLNAFL 388 (468)
T ss_pred CCccccccCCHHHHhhcCCCeEEE---EeCCHHHHhcccccceeeecCccccHHHHHHcCCCEEecC--ccccchhhHHH
Confidence 221 11 33 444444 4776 68876 666999999999999999999999999 78899999998
Q ss_pred HHH-cCcEEEEec-------CCCChhhHHHHHHHHhh
Q 001947 320 LEF-YQGGVEMIR-------RDLLTGHWKPYLERAIS 348 (992)
Q Consensus 320 le~-~G~Gi~v~~-------~~~~~~~l~~al~~ll~ 348 (992)
+++ .|+|+.+.. +.++.+++.++|++++.
T Consensus 389 ~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 389 MVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred HHHHhCceEEEecccccccCCcccHHHHHHHHHHHHh
Confidence 776 899997742 12477899999999995
No 63
>PLN00164 glucosyltransferase; Provisional
Probab=99.78 E-value=9.4e-17 Score=189.16 Aligned_cols=354 Identities=12% Similarity=0.092 Sum_probs=194.7
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCC----CcEEEEeCCCCcc-----cccccC-----CCceeeeeecccCCc
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAG----HDVHVVTGAPDFV-----FTSEIQ-----SPRLFIRKVLLDCGA 78 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~G----heV~~~~~~~~~~-----~~~~i~-----~~~~~~~~~~~~~g~ 78 (992)
|++..|++ ++.++.||++|.+.||+.|..+| +.|+|++...... ....+. ...+.+... ..+.
T Consensus 1 ~~~~HVVl-vPfpaqGHi~P~l~LAk~La~~g~~~~~~vT~~~t~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~ 77 (480)
T PLN00164 1 MAAPTVVL-LPVWGSGHLMSMLEAGKRLLASSGGGALSLTVLVMPPPTPESASEVAAHVRREAASGLDIRFHHL--PAVE 77 (480)
T ss_pred CCCCEEEE-eCCcchhHHHHHHHHHHHHHhCCCCCcEEEEEEEcCCCccchhHHHHHHHhhcccCCCCEEEEEC--CCCC
Confidence 34445543 68899999999999999999986 6799887542110 111110 011222221 1111
Q ss_pred ccccccccChHHHHHHHHHHhhccHHHhHHHHHHHHHcC--CCcEEEECC-CchHHHHHHHcCCcEEEEecCc-hh-HHH
Q 001947 79 VQADALTVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIY 153 (992)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~--kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~-~~~ 153 (992)
.. ... .+. ..+...+ .........++|++. ++++||+|. .+|+..+|+.+|||.+.+...+ .. ..+
T Consensus 78 ~p-~~~-e~~----~~~~~~~---~~~~~~~l~~~L~~l~~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~sA~~~~~~ 148 (480)
T PLN00164 78 PP-TDA-AGV----EEFISRY---IQLHAPHVRAAIAGLSCPVAALVVDFFCTPLLDVARELAVPAYVYFTSTAAMLALM 148 (480)
T ss_pred CC-Ccc-ccH----HHHHHHH---HHhhhHHHHHHHHhcCCCceEEEECCcchhHHHHHHHhCCCEEEEECccHHHHHHH
Confidence 10 000 011 1111101 111122234455553 459999997 8899999999999999873222 00 000
Q ss_pred HHH-------------------Hhhh--------c-----cc---hHHHHHHHHhhccccceeeecCCCCC-------C-
Q 001947 154 AEY-------------------VMAA--------G-----HH---HRSIVWQIAEDYSHCEFLIRLPGYCP-------M- 190 (992)
Q Consensus 154 ~~~-------------------~~~~--------~-----~~---~~~i~~~l~~~y~~~d~ll~~~~~~~-------~- 190 (992)
..+ ++.. + .. +..+.... +....++.++.-++... +
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~-~~~~~~~~vlvNTf~eLE~~~~~~~~ 227 (480)
T PLN00164 149 LRLPALDEEVAVEFEEMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHG-RRFMEAAGIIVNTAAELEPGVLAAIA 227 (480)
T ss_pred hhhhhhcccccCcccccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHH-HhhhhcCEEEEechHHhhHHHHHHHH
Confidence 000 0000 0 00 00011111 11122332332111100 0
Q ss_pred -----C--CCCceeecCccccc---C--CCChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEE--E
Q 001947 191 -----P--AFRDVIDVPLVVRR---L--HKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKC--L 251 (992)
Q Consensus 191 -----p--~~~~v~~vp~~~~~---~--~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~--V 251 (992)
+ ..+.+..|||+... . ....+++.+|++-.+.+++|||+|||.... .++...|...+..| +
T Consensus 228 ~~~~~~~~~~~~v~~vGPl~~~~~~~~~~~~~~~~~~wLd~~~~~svvyvsfGS~~~~~~~q~~ela~gL~~s~~~flWv 307 (480)
T PLN00164 228 DGRCTPGRPAPTVYPIGPVISLAFTPPAEQPPHECVRWLDAQPPASVVFLCFGSMGFFDAPQVREIAAGLERSGHRFLWV 307 (480)
T ss_pred hccccccCCCCceEEeCCCccccccCCCccchHHHHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCEEEE
Confidence 0 01467888887531 1 112346778888777788999999997552 23333454444433 3
Q ss_pred EeCCCC-----------CC-CCCC---------eEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEe
Q 001947 252 VCGASD-----------SQ-LPPN---------FIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVR 306 (992)
Q Consensus 252 v~G~~~-----------~~-l~~n---------v~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP 306 (992)
+-.... .. +|+| +.+. .|+| ++|++++ +||||||+||++|++++|||||++|
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~---~w~PQ~~iL~h~~vg~fvtH~GwnS~~Eai~~GVP~l~~P 384 (480)
T PLN00164 308 LRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWP---TWAPQKEILAHAAVGGFVTHCGWNSVLESLWHGVPMAPWP 384 (480)
T ss_pred EcCCcccccccccccchhhhCChHHHHHhcCCCeEEe---ecCCHHHHhcCcccCeEEeecccchHHHHHHcCCCEEeCC
Confidence 332210 01 4444 3333 4666 6888755 8999999999999999999999999
Q ss_pred CCCCCChHHHHHHHH-HcCcEEEEecC-----CCChhhHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCC
Q 001947 307 RDYFNEEPFLRNMLE-FYQGGVEMIRR-----DLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDK 380 (992)
Q Consensus 307 ~~~~~EQ~~NA~~le-~~G~Gi~v~~~-----~~~~~~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~ 380 (992)
.+.||+.|++++. ..|+|+.+..+ .++.+.+.++|++++.++.. .....++-|+.+.+.+. ++..+.
T Consensus 385 --~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~---~~~~~r~~a~~~~~~~~--~a~~~g 457 (480)
T PLN00164 385 --LYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEE---EGRKAREKAAEMKAACR--KAVEEG 457 (480)
T ss_pred --ccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCch---hHHHHHHHHHHHHHHHH--HHhcCC
Confidence 7889999998875 68999998532 25789999999999965310 12234444445544432 223344
Q ss_pred CCccchhhH
Q 001947 381 LSGARRLRD 389 (992)
Q Consensus 381 ~~g~~~Lr~ 389 (992)
.+....|..
T Consensus 458 GSS~~~l~~ 466 (480)
T PLN00164 458 GSSYAALQR 466 (480)
T ss_pred CcHHHHHHH
Confidence 444555533
No 64
>PLN02167 UDP-glycosyltransferase family protein
Probab=99.77 E-value=8.1e-17 Score=189.99 Aligned_cols=151 Identities=15% Similarity=0.189 Sum_probs=108.3
Q ss_pred CceeecCccccc-C----C---CChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCcEEEE-eCCC-C-
Q 001947 194 RDVIDVPLVVRR-L----H---KSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGWKCLV-CGAS-D- 257 (992)
Q Consensus 194 ~~v~~vp~~~~~-~----~---~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~~~Vv-~G~~-~- 257 (992)
+++..|||+... . . ....++.+|++-.+.+++|||+|||...- .++...|...++.|++ .+.. .
T Consensus 243 p~v~~vGpl~~~~~~~~~~~~~~~~~~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~ 322 (475)
T PLN02167 243 PPVYPVGPILSLKDRTSPNLDSSDRDRIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAE 322 (475)
T ss_pred CeeEEeccccccccccCCCCCcchhHHHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCCCcEEEEEecCccc
Confidence 467788887431 1 1 11246778888777788999999998542 2334445445555443 2321 1
Q ss_pred ----C-CCCCCe--------EEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH-
Q 001947 258 ----S-QLPPNF--------IKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM- 319 (992)
Q Consensus 258 ----~-~l~~nv--------~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~- 319 (992)
. .+|+|+ .++ .|+| ++|++ +++||||||+||++|++++|||||++| .+.||+.||++
T Consensus 323 ~~~~~~~lp~~~~er~~~rg~v~---~w~PQ~~iL~h~~vg~fvtH~G~nS~~Eal~~GvP~l~~P--~~~DQ~~na~~~ 397 (475)
T PLN02167 323 YASPYEPLPEGFMDRVMGRGLVC---GWAPQVEILAHKAIGGFVSHCGWNSVLESLWFGVPIATWP--MYAEQQLNAFTM 397 (475)
T ss_pred ccchhhhCChHHHHHhccCeeee---ccCCHHHHhcCcccCeEEeeCCcccHHHHHHcCCCEEecc--ccccchhhHHHH
Confidence 1 156553 233 4777 68866 779999999999999999999999999 68899999976
Q ss_pred HHHcCcEEEEecC-------CCChhhHHHHHHHHhhC
Q 001947 320 LEFYQGGVEMIRR-------DLLTGHWKPYLERAISL 349 (992)
Q Consensus 320 le~~G~Gi~v~~~-------~~~~~~l~~al~~ll~~ 349 (992)
++..|+|+.+... .++.+.+.++|++++.+
T Consensus 398 ~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~ 434 (475)
T PLN02167 398 VKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDG 434 (475)
T ss_pred HHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcC
Confidence 6789999998642 45788999999999964
No 65
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.76 E-value=2.6e-16 Score=179.30 Aligned_cols=303 Identities=15% Similarity=0.082 Sum_probs=170.0
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (992)
+|++...|. .||+.++..||++|.++||+|++++...... ........+.+...... +.. .......+..+.
T Consensus 2 ~i~~~~g~~-~g~~~~~~~La~~L~~~g~eV~vv~~~~~~~-~~~~~~~g~~~~~i~~~-~~~-----~~~~~~~l~~~~ 73 (348)
T TIGR01133 2 KVVLAAGGT-GGHIFPALAVAEELIKRGVEVLWLGTKRGLE-KRLVPKAGIEFYFIPVG-GLR-----RKGSFRLIKTPL 73 (348)
T ss_pred eEEEEeCcc-HHHHhHHHHHHHHHHhCCCEEEEEeCCCcch-hcccccCCCceEEEecc-CcC-----CCChHHHHHHHH
Confidence 565455444 5999999999999999999999998643211 11111011222221000 000 011111111111
Q ss_pred HHhhccHHHhHHHHHHHHHcCCCcEEEECCC---chHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHh
Q 001947 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~---~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 173 (992)
.. ...+.+..+++++++||+|+++.. .++.++++..++|.+.+....+. ... -+++
T Consensus 74 ~~-----~~~~~~l~~~i~~~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~----~~~----------~~~~-- 132 (348)
T TIGR01133 74 KL-----LKAVFQARRILKKFKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVP----GLT----------NKLL-- 132 (348)
T ss_pred HH-----HHHHHHHHHHHHhcCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCc----cHH----------HHHH--
Confidence 11 113445677899999999998752 33455678889999754211110 000 0011
Q ss_pred hccccceeeecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHH-Hh---hCCCC
Q 001947 174 DYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-EE---YLPSG 247 (992)
Q Consensus 174 ~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll-~~---l~~~~ 247 (992)
+..++.++.............+.+.|+........ .-++.++++++.++|++.+|+.+.. .+++ +. +...+
T Consensus 133 -~~~~d~ii~~~~~~~~~~~~~~i~n~v~~~~~~~~--~~~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~~ 209 (348)
T TIGR01133 133 -SRFAKKVLISFPGAKDHFEAVLVGNPVRQEIRSLP--VPRERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAEKG 209 (348)
T ss_pred -HHHhCeeEECchhHhhcCCceEEcCCcCHHHhccc--chhhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhcC
Confidence 11223333211110000011244445432211111 1123567776777666665655542 1222 22 32334
Q ss_pred cEE-EEeCCCCCC-----CC-CC-eEEcCCCC-CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC-CChHHHH
Q 001947 248 WKC-LVCGASDSQ-----LP-PN-FIKLPKDA-YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF-NEEPFLR 317 (992)
Q Consensus 248 ~~~-Vv~G~~~~~-----l~-~n-v~v~~f~~-~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~-~EQ~~NA 317 (992)
+.+ +++|....+ +. .+ ..++.|.. +++++|++||++|+++|.+|++|||++|+|+|+++.++. .+|..|+
T Consensus 210 ~~~~~~~g~~~~~~l~~~~~~~~l~~~v~~~~~~~~~~l~~ad~~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~ 289 (348)
T TIGR01133 210 IQIVHQTGKNDLEKVKNVYQELGIEAIVTFIDENMAAAYAAADLVISRAGASTVAELAAAGVPAILIPYPYAADDQYYNA 289 (348)
T ss_pred cEEEEECCcchHHHHHHHHhhCCceEEecCcccCHHHHHHhCCEEEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHH
Confidence 544 455654321 11 11 12223332 788999999999999998899999999999999986542 3567899
Q ss_pred HHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 318 NMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 318 ~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
+.+++.+.|..++..+.+++.+.++|.++++++.
T Consensus 290 ~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~ 323 (348)
T TIGR01133 290 KFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPA 323 (348)
T ss_pred HHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHH
Confidence 9999999999998877778999999999997654
No 66
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=99.76 E-value=4.2e-17 Score=179.78 Aligned_cols=249 Identities=17% Similarity=0.199 Sum_probs=141.8
Q ss_pred cCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhcc
Q 001947 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAP 102 (992)
Q Consensus 23 ~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 102 (992)
...|+||++||++||++|+++||+|+|++........+.+...++.+.. .. +. .+
T Consensus 10 ~~iG~GHv~Rcl~LA~~l~~~g~~v~f~~~~~~~~~~~~i~~~g~~v~~-------~~-~~--~~--------------- 64 (279)
T TIGR03590 10 SEIGLGHVMRCLTLARALHAQGAEVAFACKPLPGDLIDLLLSAGFPVYE-------LP-DE--SS--------------- 64 (279)
T ss_pred ccccccHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHHHHHcCCeEEE-------ec-CC--Cc---------------
Confidence 4568999999999999999999999999876432222222111111111 00 00 00
Q ss_pred HHHhHHHHHHHHHcCCCcEEEECCCchHHHH---HHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccc
Q 001947 103 RKSILKDEVEWLNSIKADLVVSDVVPVACRA---AADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCE 179 (992)
Q Consensus 103 ~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~a---A~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~d 179 (992)
+..-..+..++|++.+||+||.|++.....+ .+..+.++++++|+.....+.+++...... .+. ..|..
T Consensus 65 ~~~d~~~~~~~l~~~~~d~vV~D~y~~~~~~~~~~k~~~~~l~~iDD~~~~~~~~D~vin~~~~----~~~--~~y~~-- 136 (279)
T TIGR03590 65 RYDDALELINLLEEEKFDILIVDHYGLDADWEKLIKEFGRKILVIDDLADRPHDCDLLLDQNLG----ADA--SDYQG-- 136 (279)
T ss_pred hhhhHHHHHHHHHhcCCCEEEEcCCCCCHHHHHHHHHhCCeEEEEecCCCCCcCCCEEEeCCCC----cCH--hHhcc--
Confidence 0011233466788899999999985433222 233467788888865211111110000000 000 01110
Q ss_pred eeeecCCCCCCCCCCceeecCcccccCCCChHHHHHHh--CC-CCCCcEEEEEcCCCCCh---hhHHHhhCC--CCc-EE
Q 001947 180 FLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKEL--GI-EDDVKLLILNFGGQPAG---WKLKEEYLP--SGW-KC 250 (992)
Q Consensus 180 ~ll~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l--~~-~~d~~~Vlvs~Gg~~~~---~~ll~~l~~--~~~-~~ 250 (992)
..|. ......|+... ..|++..+.. .. ..+.+.|++++||.+.. ..+++.+.. .++ ..
T Consensus 137 ---------~~~~-~~~~l~G~~Y~---~lr~eF~~~~~~~~~~~~~~~iLi~~GG~d~~~~~~~~l~~l~~~~~~~~i~ 203 (279)
T TIGR03590 137 ---------LVPA-NCRLLLGPSYA---LLREEFYQLATANKRRKPLRRVLVSFGGADPDNLTLKLLSALAESQINISIT 203 (279)
T ss_pred ---------cCcC-CCeEEecchHH---hhhHHHHHhhHhhhcccccCeEEEEeCCcCCcCHHHHHHHHHhccccCceEE
Confidence 0000 01111222100 0111221110 00 11346789999988763 345555432 344 34
Q ss_pred EEeCCCCCC---------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH
Q 001947 251 LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML 320 (992)
Q Consensus 251 Vv~G~~~~~---------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~l 320 (992)
+++|++.+. ..+|+++.+|+++|+++|+.||++||++| +|++|++++|+|+|++|.. .+|..||+.+
T Consensus 204 vv~G~~~~~~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aDl~Is~~G-~T~~E~~a~g~P~i~i~~~--~nQ~~~a~~~ 279 (279)
T TIGR03590 204 LVTGSSNPNLDELKKFAKEYPNIILFIDVENMAELMNEADLAIGAAG-STSWERCCLGLPSLAICLA--ENQQSNSQQL 279 (279)
T ss_pred EEECCCCcCHHHHHHHHHhCCCEEEEeCHHHHHHHHHHCCEEEECCc-hHHHHHHHcCCCEEEEEec--ccHHHHhhhC
Confidence 578986542 25689999999999999999999999988 9999999999999999964 4688898753
No 67
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=99.76 E-value=2.3e-16 Score=183.57 Aligned_cols=315 Identities=16% Similarity=0.158 Sum_probs=175.2
Q ss_pred ccCCCcccHHHHHHHHHHHHH-CCCcEEEEeCCCCcccccccC----CCceeeeeecccCCccccc-ccccChHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLIS-AGHDVHVVTGAPDFVFTSEIQ----SPRLFIRKVLLDCGAVQAD-ALTVDRLASLEKY 95 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~-~GheV~~~~~~~~~~~~~~i~----~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~ 95 (992)
++.++.||++|.+.||+.|.. +|..|+|++...... ...+. .+.+.+... ..|+.... ....+....+...
T Consensus 9 ~P~p~qGHi~P~l~La~~La~~~G~~vT~v~t~~~~~-~~~~~~~~~~~~i~~~~i--~dglp~g~~~~~~~~~~~~~~~ 85 (455)
T PLN02152 9 VTFPAQGHVNPSLRFARRLIKTTGTRVTFATCLSVIH-RSMIPNHNNVENLSFLTF--SDGFDDGVISNTDDVQNRLVNF 85 (455)
T ss_pred ecCcccccHHHHHHHHHHHhhCCCcEEEEEeccchhh-hhhhccCCCCCCEEEEEc--CCCCCCccccccccHHHHHHHH
Confidence 688999999999999999996 699999997653111 11111 112333332 11322100 0011111111111
Q ss_pred HHHhhccHHHhHHHHHHHHH-cCCC-cEEEECC-CchHHHHHHHcCCcEEEEecCc-hh-HHHHHH---------Hhhhc
Q 001947 96 SETAVAPRKSILKDEVEWLN-SIKA-DLVVSDV-VPVACRAAADAGIRSVCVTNFS-WD-FIYAEY---------VMAAG 161 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~-~~kP-DlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~~-~~~~~~---------~~~~~ 161 (992)
.. .....+.+.++-+. ..+| ++||+|. .+|+..+|+.+|||.+.+...+ .. ..+..+ ++..+
T Consensus 86 ~~----~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t~~a~~~~~~~~~~~~~~~~~~iPglp 161 (455)
T PLN02152 86 ER----NGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWIQPAFVFDIYYNYSTGNNSVFEFPNLP 161 (455)
T ss_pred HH----hccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEECccHHHHHHHHHhhccCCCeeecCCCC
Confidence 11 11112222222121 2244 9999997 8899999999999998873322 11 111111 11000
Q ss_pred c----c----------hHHHHH---HHHhhccc--cceeeecCCCCC-------CCCCCceeecCcccccC----C----
Q 001947 162 H----H----------HRSIVW---QIAEDYSH--CEFLIRLPGYCP-------MPAFRDVIDVPLVVRRL----H---- 207 (992)
Q Consensus 162 ~----~----------~~~i~~---~l~~~y~~--~d~ll~~~~~~~-------~p~~~~v~~vp~~~~~~----~---- 207 (992)
. . ...... +....... ++.++.-++... +.. ..+..|||+.... .
T Consensus 162 ~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~~~~~~l~~-~~v~~VGPL~~~~~~~~~~~~~ 240 (455)
T PLN02152 162 SLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFDSLEPEFLTAIPN-IEMVAVGPLLPAEIFTGSESGK 240 (455)
T ss_pred CCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChHHhhHHHHHhhhc-CCEEEEcccCccccccccccCc
Confidence 0 0 000001 11111111 122332222110 111 2477888874310 0
Q ss_pred -----CChHHHHHHhCCCCCCcEEEEEcCCCCC-h----hhHHHhhCCCC--cEEEEeCCC--------CC-------C-
Q 001947 208 -----KSRKEVRKELGIEDDVKLLILNFGGQPA-G----WKLKEEYLPSG--WKCLVCGAS--------DS-------Q- 259 (992)
Q Consensus 208 -----~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~-~----~~ll~~l~~~~--~~~Vv~G~~--------~~-------~- 259 (992)
....++.+|++-.+++.+|||||||... . .++...|...+ +.+++..+. .. +
T Consensus 241 ~~~~~~~~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~ 320 (455)
T PLN02152 241 DLSVRDQSSSYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAG 320 (455)
T ss_pred cccccccchHHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchh
Confidence 0123577888877778999999999765 2 23333443333 334443211 00 0
Q ss_pred ----CCCCeEEcCCCCCHH--HHHhhcC--EEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEe
Q 001947 260 ----LPPNFIKLPKDAYTP--DFMAASD--CMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMI 330 (992)
Q Consensus 260 ----l~~nv~v~~f~~~~p--~lL~aaD--lvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~-G~Gi~v~ 330 (992)
.++|..+. .|+| ++|++.+ +||||||+||++|++++|||||++| .+.||+.||+++++. |+|+.+.
T Consensus 321 f~e~~~~~g~v~---~W~PQ~~iL~h~~vg~fvtH~G~nS~~Ea~~~GvP~l~~P--~~~DQ~~na~~~~~~~~~G~~~~ 395 (455)
T PLN02152 321 FRHELEEVGMIV---SWCSQIEVLRHRAVGCFVTHCGWSSSLESLVLGVPVVAFP--MWSDQPANAKLLEEIWKTGVRVR 395 (455)
T ss_pred HHHhccCCeEEE---eeCCHHHHhCCcccceEEeeCCcccHHHHHHcCCCEEecc--ccccchHHHHHHHHHhCceEEee
Confidence 23444555 4666 7888755 7999999999999999999999999 688999999999873 6666654
Q ss_pred --cC-CCChhhHHHHHHHHhhC
Q 001947 331 --RR-DLLTGHWKPYLERAISL 349 (992)
Q Consensus 331 --~~-~~~~~~l~~al~~ll~~ 349 (992)
.. .++.+++.++|++++.+
T Consensus 396 ~~~~~~~~~e~l~~av~~vm~~ 417 (455)
T PLN02152 396 ENSEGLVERGEIRRCLEAVMEE 417 (455)
T ss_pred cCcCCcCcHHHHHHHHHHHHhh
Confidence 23 35788999999999963
No 68
>PLN02534 UDP-glycosyltransferase
Probab=99.75 E-value=6.2e-16 Score=181.46 Aligned_cols=318 Identities=12% Similarity=0.099 Sum_probs=178.6
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCc-ccccccC-----CCceeeeeeccc---CCcccc-cc-cccChHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDF-VFTSEIQ-----SPRLFIRKVLLD---CGAVQA-DA-LTVDRLA 90 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~-~~~~~i~-----~~~~~~~~~~~~---~g~~~~-~~-~~~~~~~ 90 (992)
++.++.||++|.+.||+.|..+|+.|||++..... .....+. ...+.+...... .|+... .. ...+...
T Consensus 14 vPfpaqGHi~P~l~LAk~La~~G~~vT~v~t~~n~~~~~~~~~~~~~~~~~i~~~~lp~p~~~dglp~~~~~~~~~~~~~ 93 (491)
T PLN02534 14 IPLMAQGHMIPMIDMARLLAERGVIVSLVTTPQNASRFAKTIDRARESGLPIRLVQIPFPCKEVGLPIGCENLDTLPSRD 93 (491)
T ss_pred ECCCCcchHHHHHHHHHHHHhCCCeEEEEECCCcHHHHhhhhhhccccCCCeEEEEcCCCCccCCCCCCccccccCCcHH
Confidence 68899999999999999999999999999765311 1111110 001333332111 132210 00 0011111
Q ss_pred HHHHHHHHhhccHHHhHHHHHHHHHc--CCCcEEEECC-CchHHHHHHHcCCcEEEEecCc-h-hHH----HHH--H---
Q 001947 91 SLEKYSETAVAPRKSILKDEVEWLNS--IKADLVVSDV-VPVACRAAADAGIRSVCVTNFS-W-DFI----YAE--Y--- 156 (992)
Q Consensus 91 ~~~~~~~~~~~~~~~~l~~~~~~L~~--~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~-~-~~~----~~~--~--- 156 (992)
.+..+.. ..........++|++ .+|++||+|. .+|+..+|+.+|||.+.+.... + ... +.. +
T Consensus 94 ~~~~~~~----~~~~l~~~l~~lL~~~~~pp~cIV~D~f~~Wa~dVA~~lgIP~v~F~t~~a~~~~~~~~~~~~~~~~~~ 169 (491)
T PLN02534 94 LLRKFYD----AVDKLQQPLERFLEQAKPPPSCIISDKCLSWTSKTAQRFNIPRIVFHGMCCFSLLSSHNIRLHNAHLSV 169 (491)
T ss_pred HHHHHHH----HHHHhHHHHHHHHHhcCCCCcEEEECCccHHHHHHHHHhCCCeEEEecchHHHHHHHHHHHHhcccccC
Confidence 2222211 112222334556654 3679999997 7899999999999998873221 1 000 000 0
Q ss_pred --------Hhhhcc----c-------------hHHHHHHHHhhccccceeeecCCCCC-------C-CCC-CceeecCcc
Q 001947 157 --------VMAAGH----H-------------HRSIVWQIAEDYSHCEFLIRLPGYCP-------M-PAF-RDVIDVPLV 202 (992)
Q Consensus 157 --------~~~~~~----~-------------~~~i~~~l~~~y~~~d~ll~~~~~~~-------~-p~~-~~v~~vp~~ 202 (992)
++..+. . ...+..++......++.++.-++... + ..+ +++..|||+
T Consensus 170 ~~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~~~l~~l~~~~~~~v~~VGPL 249 (491)
T PLN02534 170 SSDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGVVVNSFNELEHGCAEAYEKAIKKKVWCVGPV 249 (491)
T ss_pred CCCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEEEEecHHHhhHHHHHHHHhhcCCcEEEECcc
Confidence 000000 0 00011111111111222222111110 0 011 357788887
Q ss_pred cccC-------------CCChHHHHHHhCCCCCCcEEEEEcCCCCCh--h---hHHHhhCCCCc--EEEEeCC-C-CC--
Q 001947 203 VRRL-------------HKSRKEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGW--KCLVCGA-S-DS-- 258 (992)
Q Consensus 203 ~~~~-------------~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~---~ll~~l~~~~~--~~Vv~G~-~-~~-- 258 (992)
.... .....++.+||+-.+++.+|||+|||.... . ++...|...+. .+++-.. . ..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~cl~wLd~~~~~sVvyvsfGS~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~ 329 (491)
T PLN02534 250 SLCNKRNLDKFERGNKASIDETQCLEWLDSMKPRSVIYACLGSLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELE 329 (491)
T ss_pred cccccccccccccCCccccchHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchh
Confidence 4310 002235778888777789999999998652 2 33334443333 3333311 1 00
Q ss_pred C--C---------CCCeEEcCCCCCHH--HHHhhcCE--EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-H
Q 001947 259 Q--L---------PPNFIKLPKDAYTP--DFMAASDC--MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-F 322 (992)
Q Consensus 259 ~--l---------~~nv~v~~f~~~~p--~lL~aaDl--vIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~ 322 (992)
. + +.|+.+. .|+| ++|++.++ ||||||+||++|++++|+|||++| .+.||+.|+++++ .
T Consensus 330 ~~~~p~gf~~~~~~~g~~v~---~w~pq~~iL~h~~v~~fvtH~G~ns~~ea~~~GvP~v~~P--~~~dq~~na~~~~e~ 404 (491)
T PLN02534 330 EWLVKENFEERIKGRGLLIK---GWAPQVLILSHPAIGGFLTHCGWNSTIEGICSGVPMITWP--LFAEQFLNEKLIVEV 404 (491)
T ss_pred hhcCchhhHHhhccCCeecc---CCCCHHHHhcCCccceEEecCccHHHHHHHHcCCCEEecc--ccccHHHHHHHHHHh
Confidence 1 2 2344443 4666 78888666 999999999999999999999999 6889999999986 6
Q ss_pred cCcEEEEec---------C----CCChhhHHHHHHHHhh
Q 001947 323 YQGGVEMIR---------R----DLLTGHWKPYLERAIS 348 (992)
Q Consensus 323 ~G~Gi~v~~---------~----~~~~~~l~~al~~ll~ 348 (992)
.|+|+.+.. + -.+.+++..+|++++.
T Consensus 405 ~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~ 443 (491)
T PLN02534 405 LRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMD 443 (491)
T ss_pred hcceEEecccccccccccccccCccCHHHHHHHHHHHhc
Confidence 699887741 1 2678899999999985
No 69
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.74 E-value=1.1e-16 Score=177.06 Aligned_cols=266 Identities=15% Similarity=0.121 Sum_probs=172.6
Q ss_pred EEEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.++||+||||+ |-=-| ||.-.++.++|+++-.|.+.+.++ + .+..
T Consensus 4 ~~~~a~aKiNL~L~i~~~r~dgyH~l~si~~~i~l~d~v~v~~~~~--~---------------------~i~~------ 54 (287)
T PRK14616 4 ISVKAFAKINLGLLITGKRPDGYHTLETIFAPINWYDTLTFSPSDT--I---------------------SMSC------ 54 (287)
T ss_pred eEEeeceeEEeeeecCCCCCCCccceeEEEEEcCCCCEEEEEECCC--E---------------------EEEe------
Confidence 357899999986 44445 888888889999998888876431 1 1110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
.-.++ + ....|.++.++..+.+..+.. .|++|.|.++||.++|||||||.
T Consensus 55 --------~~~~~-------------------p-~~~~nl~~~a~~~~~~~~~~~--~~~~I~i~k~IP~~~GLGssSA~ 104 (287)
T PRK14616 55 --------TNLDL-------------------P-VDDSNLCIRAAKALQEYAGVS--KGVSITLDKRVPFGAGLGGGSSD 104 (287)
T ss_pred --------CCCCC-------------------C-CCccHHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCchHHHHH
Confidence 00010 0 112577777777777777753 69999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhh-ccCcceEEEEeecCccceeeecCCCCeEEEEEe
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA-CGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 730 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~-~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~d 730 (992)
++|++.+++.++|.+++.++++++|.++|.+ +| +.+ +||. .+..... +..+.++.+..+.+++++
T Consensus 105 aaA~l~al~~l~g~~ls~~el~~~a~~ig~D---vp-------~~l~~gg~---~~~~g~g-~~~~~~~~~~~~~~vvv~ 170 (287)
T PRK14616 105 AATVLRVLNELWEINAPSADLHRLAVKLGAD---VP-------YFLEMKGL---AYATGIG-DELEDLQLTLPFHIVTVF 170 (287)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhCCC---cc-------eEeccCCc---EEEEEcC-ceeEECCcCCCcEEEEEC
Confidence 9999999999999999999999999998753 22 122 4553 2221122 212334444457788888
Q ss_pred CCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhh
Q 001947 731 SGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAK 810 (992)
Q Consensus 731 sgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~ 810 (992)
++..-+|.. .+ +
T Consensus 171 P~~~vsT~~--------------------------------------------------------a~------------~ 182 (287)
T PRK14616 171 PEEHISTVW--------------------------------------------------------AY------------K 182 (287)
T ss_pred CCCCcCHHH--------------------------------------------------------HH------------H
Confidence 776555431 00 1
Q ss_pred cCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhc
Q 001947 811 NIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSAC 890 (992)
Q Consensus 811 ~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~ 890 (992)
.+|..+ .+ ...++.....++... ++++.++.++|+- +.+|.-
T Consensus 183 ~l~~~~-------------------------------~~---~~~~~~~l~~~l~~~---~~~~l~~~~~nD~-e~~~~~ 224 (287)
T PRK14616 183 NFYRRF-------------------------------ER---ERPDLKTLVRRLCLD---GDTSVLPAFENDF-ESAVFD 224 (287)
T ss_pred Hhhhhc-------------------------------cc---CCchHHHHHHHHhcC---CHHHHHHHhcCcc-HHHHHH
Confidence 111100 00 011222333333332 2666677666654 555552
Q ss_pred CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHH
Q 001947 891 GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYK 956 (992)
Q Consensus 891 ~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~ 956 (992)
..|+++++.+.+++ .|++|+.|||+| .|++++.++..+++++.+.+++.|.
T Consensus 225 --l~p~l~~v~~~~~~-----------~Galg~~lSGSG--ptv~al~~~~~~a~~i~~~l~~~~~ 275 (287)
T PRK14616 225 --HYPAVRKVKDDLLE-----------AGSFFASLSGSG--SAVFGLFENEADAEAAAEMMRARYR 275 (287)
T ss_pred --hChHHHHHHHHHHh-----------CCCCeEEEeccc--ccceEEeCCHHHHHHHHHHhHHhCc
Confidence 47999999998887 689999999999 7999887654434556666666553
No 70
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.74 E-value=1.4e-16 Score=175.04 Aligned_cols=167 Identities=15% Similarity=0.173 Sum_probs=124.4
Q ss_pred EEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 001947 498 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 572 (992)
Q Consensus 498 ~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 572 (992)
.++||+||||+ |-..| ||.-..+-.+|+++-++.+.+.++ +.+.
T Consensus 3 ~~~a~aKiNL~L~i~~kr~dgyH~l~s~~~ai~l~d~v~i~~~~~-----------------------~~i~-------- 51 (275)
T PRK14611 3 VLLSPAKVNLGLWILGKRPDGYHEIFTIYHTIDLYDRIYIKEHHT-----------------------LEVK-------- 51 (275)
T ss_pred eeeecceEEeeeccCcCCCCCcchhhheeEeccCCcEEEEEECCc-----------------------EEEE--------
Confidence 46899999986 66667 888888888999999988876432 1111
Q ss_pred CCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHH
Q 001947 573 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 652 (992)
Q Consensus 573 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~ 652 (992)
.+... -+ .|.|+++.++..+.+..|.. .|++|.|.++||+++|||||||..
T Consensus 52 ------~~~~~-------------------~~--~~~n~v~~a~~~~~~~~g~~--~~~~i~i~k~IP~~~GLGSSsA~a 102 (275)
T PRK14611 52 ------TSSPQ-------------------IK--EEENIVYKALRLFERYTGID--INYSIFIEKNIPVGAGLGGGSSNA 102 (275)
T ss_pred ------eCCCC-------------------CC--CcccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCccHHHHHH
Confidence 00000 01 15889988888776666754 589999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCC
Q 001947 653 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 732 (992)
Q Consensus 653 va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsg 732 (992)
||++.|++.+++.+++++++.++|..+|. |...+++||. ++........ ..++.+.+..+++++++
T Consensus 103 aA~l~al~~~~~~~l~~~~l~~la~~i~~----------D~~~~~~Gg~---~~~~~~g~~~-~~~~~~~~~~~vv~~p~ 168 (275)
T PRK14611 103 AVVLKYLNELLGNPLSEEELFELASSISA----------DAPFFLKGGF---ALGRGIGDKL-EFLEKPISREITLVYPN 168 (275)
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHhCC----------CCCeeecCCe---EEEeccCcee-EECCcCCCcEEEEEeCC
Confidence 99999999999999999999999998774 5445678884 4444333222 34444445678999998
Q ss_pred CccccC
Q 001947 733 IRHSVG 738 (992)
Q Consensus 733 i~~~~~ 738 (992)
+..+|.
T Consensus 169 ~~~sT~ 174 (275)
T PRK14611 169 IKSSTG 174 (275)
T ss_pred CCCChH
Confidence 887764
No 71
>PLN03015 UDP-glucosyl transferase
Probab=99.73 E-value=1.2e-15 Score=177.29 Aligned_cols=358 Identities=14% Similarity=0.118 Sum_probs=194.2
Q ss_pred ccEEEEEeccCCCcccHHHHHHHHHHHHHC-CCcEEEEeCCC-C-ccc-ccccCC----CceeeeeecccCCccccccc-
Q 001947 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAP-D-FVF-TSEIQS----PRLFIRKVLLDCGAVQADAL- 84 (992)
Q Consensus 14 ~~~~Il~~v~g~G~GHv~r~laLA~~L~~~-GheV~~~~~~~-~-~~~-~~~i~~----~~~~~~~~~~~~g~~~~~~~- 84 (992)
.+.+|++ ++.++.||++|.+.||+.|..+ |..|+|++... . ... ...+.. +.+.+... ..+.. +.+
T Consensus 2 ~~pHvvl-~P~p~qGHi~P~l~LAk~La~~~g~~vT~v~t~~~~~~~~~~~~~~~~~~~~~i~~~~l--p~~~~--~~l~ 76 (470)
T PLN03015 2 DQPHALL-VASPGLGHLIPILELGNRLSSVLNIHVTILAVTSGSSSPTETEAIHAAAARTTCQITEI--PSVDV--DNLV 76 (470)
T ss_pred CCcEEEE-ECCcccccHHHHHHHHHHHHhCCCCeEEEEECCCchhhhccccccccccCCCceEEEEC--CCCcc--ccCC
Confidence 3334433 6889999999999999999977 88899986542 1 111 111110 11222221 11110 111
Q ss_pred ccChHHHHHHHHHHhhccHHHhHHHHHHHHHcC--CCcEEEECC-CchHHHHHHHcCCc-EEEEecCc-hhH-HHHH---
Q 001947 85 TVDRLASLEKYSETAVAPRKSILKDEVEWLNSI--KADLVVSDV-VPVACRAAADAGIR-SVCVTNFS-WDF-IYAE--- 155 (992)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~--kPDlVVsD~-~~~a~~aA~~~gIP-~v~is~~~-~~~-~~~~--- 155 (992)
..+. .....+.... ........++|++. +|++||+|. .+|+..+|+.+||| .+.+.... +.. .+..
T Consensus 77 ~~~~-~~~~~~~~~~----~~~~~~~~~~l~~l~~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~~~a~~~~~~~~l~~ 151 (470)
T PLN03015 77 EPDA-TIFTKMVVKM----RAMKPAVRDAVKSMKRKPTVMIVDFFGTALMSIADDVGVTAKYVYIPSHAWFLAVMVYLPV 151 (470)
T ss_pred CCCc-cHHHHHHHHH----HhchHHHHHHHHhcCCCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcCHHHHHHHHHHhhhh
Confidence 0010 1111121111 11222334555544 689999997 88899999999999 46552211 110 0000
Q ss_pred ---H-------------Hhhhcc-c---hH--------HHHHHHHh---hccccceeeecCCCCC-------CCC-----
Q 001947 156 ---Y-------------VMAAGH-H---HR--------SIVWQIAE---DYSHCEFLIRLPGYCP-------MPA----- 192 (992)
Q Consensus 156 ---~-------------~~~~~~-~---~~--------~i~~~l~~---~y~~~d~ll~~~~~~~-------~p~----- 192 (992)
. ++..+. . .. .....+.+ ....++-++--++... +..
T Consensus 152 ~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE~~~~~~l~~~~~~~ 231 (470)
T PLN03015 152 LDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQGNTLAALREDMELN 231 (470)
T ss_pred hhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHhHHHHHHHHhhcccc
Confidence 0 000000 0 00 00001111 1122232222111100 000
Q ss_pred ---CCceeecCcccccC--CCChHHHHHHhCCCCCCcEEEEEcCCCCCh-----hhHHHhhCCCCc--EEEEeCC-----
Q 001947 193 ---FRDVIDVPLVVRRL--HKSRKEVRKELGIEDDVKLLILNFGGQPAG-----WKLKEEYLPSGW--KCLVCGA----- 255 (992)
Q Consensus 193 ---~~~v~~vp~~~~~~--~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-----~~ll~~l~~~~~--~~Vv~G~----- 255 (992)
.+.+..|||+.... .....++.+||+-.+.+.+|||+|||...- .++...|...+. .+++-.+
T Consensus 232 ~~~~~~v~~VGPl~~~~~~~~~~~~~~~WLd~~~~~sVvyvsFGS~~~~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~ 311 (470)
T PLN03015 232 RVMKVPVYPIGPIVRTNVHVEKRNSIFEWLDKQGERSVVYVCLGSGGTLTFEQTVELAWGLELSGQRFVWVLRRPASYLG 311 (470)
T ss_pred cccCCceEEecCCCCCcccccchHHHHHHHHhCCCCCEEEEECCcCCcCCHHHHHHHHHHHHhCCCcEEEEEecCccccc
Confidence 13478888875321 112346888888777789999999998662 133334443333 3343211
Q ss_pred -----C--CC-CCCCC---------eEEcCCCCCHH--HHHhh--cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChH
Q 001947 256 -----S--DS-QLPPN---------FIKLPKDAYTP--DFMAA--SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEP 314 (992)
Q Consensus 256 -----~--~~-~l~~n---------v~v~~f~~~~p--~lL~a--aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~ 314 (992)
. .. .+|+| +.+. .|+| ++|++ +.+||||||+||++|++++|+|||++| .+.||+
T Consensus 312 ~~~~~~~~~~~~lp~~f~er~~~rGl~v~---~W~PQ~~vL~h~~vg~fvtH~GwnS~~Eai~~GvP~v~~P--~~~DQ~ 386 (470)
T PLN03015 312 ASSSDDDQVSASLPEGFLDRTRGVGLVVT---QWAPQVEILSHRSIGGFLSHCGWSSVLESLTKGVPIVAWP--LYAEQW 386 (470)
T ss_pred cccccccchhhcCChHHHHhhccCceEEE---ecCCHHHHhccCccCeEEecCCchhHHHHHHcCCCEEecc--cccchH
Confidence 0 11 15656 3343 4666 68876 677999999999999999999999999 688999
Q ss_pred HHHHHH-HHcCcEEEEec----CCCChhhHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHHccCccccCCCCccchhhH
Q 001947 315 FLRNML-EFYQGGVEMIR----RDLLTGHWKPYLERAISLKPCYEGGINGGEVAAHILQETAIGKNYASDKLSGARRLRD 389 (992)
Q Consensus 315 ~NA~~l-e~~G~Gi~v~~----~~~~~~~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~~~~~~~s~~~~g~~~Lr~ 389 (992)
.||+++ +..|+|+.+.. ..++.+.+..+|++++.... ......++=|..+.+.+. ++..+..++.+.|..
T Consensus 387 ~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~---eeg~~~R~ra~~lk~~a~--~Av~eGGSS~~nl~~ 461 (470)
T PLN03015 387 MNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEED---EEGQKIRAKAEEVRVSSE--RAWSHGGSSYNSLFE 461 (470)
T ss_pred HHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCc---ccHHHHHHHHHHHHHHHH--HHhcCCCcHHHHHHH
Confidence 999999 68899999952 34778899999999985100 011223333344443332 334455555666644
Q ss_pred hh
Q 001947 390 AI 391 (992)
Q Consensus 390 a~ 391 (992)
-+
T Consensus 462 ~~ 463 (470)
T PLN03015 462 WA 463 (470)
T ss_pred HH
Confidence 43
No 72
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.73 E-value=1.1e-16 Score=176.23 Aligned_cols=171 Identities=12% Similarity=0.137 Sum_probs=121.5
Q ss_pred EEEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.++||+||||+ |-..| ||.-..+=..|+++-.+.+.+.+..+ +.+..
T Consensus 4 ~~~~apaKiNl~L~i~~~r~dgyH~l~s~~~~i~l~d~v~v~~~~~~~---------------------~~i~~------ 56 (280)
T PRK14614 4 LTLKAPAKVNYRLDVLRRRPDGYHDLRMIMQRVDLCDEIEIALSDGPG---------------------IRVTC------ 56 (280)
T ss_pred eEEeecceEEeeeccCCCCCCCcChhheEeEECCCCeEEEEEECCCCC---------------------EEEEe------
Confidence 456899999975 55555 77777777788888888887654211 11110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
+-..+ +.. -.|.++.++..+++..+.. .|+++.|.++||.++|||||||.
T Consensus 57 --------~~~~~-------------------p~~-~~nl~~~a~~~~~~~~~~~--~~~~i~i~~~IP~~~GLGsssa~ 106 (280)
T PRK14614 57 --------GREGV-------------------PDG-PGNIAWRAADALLDLSGRE--VGIDISITKNIPVAAGLGGGSSD 106 (280)
T ss_pred --------CCCCC-------------------CCC-CCcHHHHHHHHHHHHhCCC--CceEEEEEecCCCcCccHHHHHH
Confidence 00001 001 1567767777777777754 58999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeC
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 731 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~ds 731 (992)
.+|++.+++.+++.+++++++.++|..+| .|...+++||. .+...+.... ..++.++++.++++++
T Consensus 107 ~~a~~~al~~~~~~~l~~~~l~~~a~~~G----------~Dv~~~l~gg~---~~~~g~ge~~-~~l~~~~~~~ivl~~p 172 (280)
T PRK14614 107 AATVLMGVNELLGLGLSDERLMEIGVKLG----------ADVPFFIFKKT---ALAEGIGDKL-TAVEGVPPLWVVLVNP 172 (280)
T ss_pred HHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcceeeeCCc---EEEEEcCcee-EECCCCCCcEEEEECC
Confidence 99999999999999999999999998653 37667788884 2333233222 4555456788999999
Q ss_pred CCccccC
Q 001947 732 GIRHSVG 738 (992)
Q Consensus 732 gi~~~~~ 738 (992)
++.-+|.
T Consensus 173 ~~~~sT~ 179 (280)
T PRK14614 173 GLHVSTA 179 (280)
T ss_pred CCCCCHH
Confidence 8887765
No 73
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.71 E-value=4e-16 Score=180.02 Aligned_cols=300 Identities=16% Similarity=0.103 Sum_probs=171.8
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhc
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (992)
+.|.-.||+.++ +|+++|++++++++|++.....+....++. .+.+.. .. .+.....+..+..+
T Consensus 11 ~aGgtsGhi~pa-al~~~l~~~~~~~~~~g~gg~~m~~~g~~~-~~~~~~-------l~----v~G~~~~l~~~~~~--- 74 (385)
T TIGR00215 11 VAGEASGDILGA-GLRQQLKEHYPNARFIGVAGPRMAAEGCEV-LYSMEE-------LS----VMGLREVLGRLGRL--- 74 (385)
T ss_pred EeCCccHHHHHH-HHHHHHHhcCCCcEEEEEccHHHHhCcCcc-ccChHH-------hh----hccHHHHHHHHHHH---
Confidence 445557999999 999999999999998865432222222210 011111 00 00111112222222
Q ss_pred cHHHhHHHHHHHHHcCCCcEEEE-CC-Cch--HHHHHHHcCCcEEEEec-CchhHHHHHHHhhhccchHHHHHHHHhhcc
Q 001947 102 PRKSILKDEVEWLNSIKADLVVS-DV-VPV--ACRAAADAGIRSVCVTN-FSWDFIYAEYVMAAGHHHRSIVWQIAEDYS 176 (992)
Q Consensus 102 ~~~~~l~~~~~~L~~~kPDlVVs-D~-~~~--a~~aA~~~gIP~v~is~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~ 176 (992)
...+.+..++++++|||+||+ |. .+. ...+|+.+|||++.+.. -.|... .... .......+.+.-.+.
T Consensus 75 --~~~~~~~~~~l~~~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~P~~waw~--~~~~---r~l~~~~d~v~~~~~ 147 (385)
T TIGR00215 75 --LKIRKEVVQLAKQAKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYISPQVWAWR--KWRA---KKIEKATDFLLAILP 147 (385)
T ss_pred --HHHHHHHHHHHHhcCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeCCcHhhcC--cchH---HHHHHHHhHhhccCC
Confidence 224567788999999999995 54 222 23477889999987632 223200 0000 000001111111110
Q ss_pred ccceeeecCCCCCCCCCCceeecCcccccCC--CChHHHHHHhCCCCCCcEEEEEcCCCCCh-hh----HHH---hhC--
Q 001947 177 HCEFLIRLPGYCPMPAFRDVIDVPLVVRRLH--KSRKEVRKELGIEDDVKLLILNFGGQPAG-WK----LKE---EYL-- 244 (992)
Q Consensus 177 ~~d~ll~~~~~~~~p~~~~v~~vp~~~~~~~--~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~~----ll~---~l~-- 244 (992)
....++. .......+++.|....... ..+.+.++.+++++++++|++..||.+.. .. +++ .+.
T Consensus 148 ~e~~~~~-----~~g~~~~~vGnPv~~~~~~~~~~~~~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~ 222 (385)
T TIGR00215 148 FEKAFYQ-----KKNVPCRFVGHPLLDAIPLYKPDRKSAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ 222 (385)
T ss_pred CcHHHHH-----hcCCCEEEECCchhhhccccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh
Confidence 0000000 0000012344444322221 34567788899988899999998988764 12 222 221
Q ss_pred CCCcEEEEeC-CCC--C---C----CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEE----eCCCC
Q 001947 245 PSGWKCLVCG-ASD--S---Q----LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFV----RRDYF 310 (992)
Q Consensus 245 ~~~~~~Vv~G-~~~--~---~----l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~i----P~~~~ 310 (992)
.+++.+++.+ ... . + ...+..+..+..+++++|++||++|+.+|..|+ |++++|+|+|++ |.+.+
T Consensus 223 ~p~~~~vi~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~aADl~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~ 301 (385)
T TIGR00215 223 EPDLRRVLPVVNFKRRLQFEQIKAEYGPDLQLHLIDGDARKAMFAADAALLASGTAAL-EAALIKTPMVVGYRMKPLTFL 301 (385)
T ss_pred CCCeEEEEEeCCchhHHHHHHHHHHhCCCCcEEEECchHHHHHHhCCEEeecCCHHHH-HHHHcCCCEEEEEcCCHHHHH
Confidence 2355555443 221 1 1 112222323334678999999999999998777 999999999999 54332
Q ss_pred C-------ChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 311 N-------EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 311 ~-------EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
. .|..|++.+...++..++..++.+++.+.+.+.++++++
T Consensus 302 ~~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 302 IARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 1 256688999999999998888999999999999999876
No 74
>TIGR00144 beta_RFAP_syn beta-RFAP synthase. This protein family contains several archaeal examples of beta-ribofuranosylaminobenzene 5-prime-phosphate synthase (beta-RFAP synthase), an enzyme involved in methanopterin biosynthesis. In some species, two members of this family are found. It is unclear whether both act as beta-RFAP synthase. This family is related to the GHMP kinases (Galactokinase, Homoserine kinase, Mevalonate kinase, Phosphomevalonate kinase). Members are found so far only in the Archaea and in Methylobacterium extorquens.
Probab=99.70 E-value=3e-15 Score=167.57 Aligned_cols=230 Identities=15% Similarity=0.217 Sum_probs=154.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+++..|. .|++|.|.++||.++|||||||+.+|++.|++.+++.+++++||++++.+.|.+
T Consensus 64 ~n~~~~~~~~~~~~~g~---~~~~i~i~~~IP~~~GLGSsaa~avA~~~a~~~l~~~~ls~~el~~~a~~ge~s------ 134 (324)
T TIGR00144 64 RSRIMEAARKTLKHIGS---EGFHFTVRSMFPAHSGLGSGTQLSLAVGRLVSEYYGMKFTAREIAHIVGRGGTS------ 134 (324)
T ss_pred HHHHHHHHHHHHHHhCC---CCEEEEEeecCCCccCccHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHhCCCCC------
Confidence 67777778877777773 489999999999999999999999999999999999999999999999976654
Q ss_pred CccchhhhhccCcceEEEEee----c--------------CccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhh
Q 001947 689 GVMDQMASACGEANKLLAMVC----Q--------------PAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAF 750 (992)
Q Consensus 689 G~~D~~~~~~Gg~~~~~~~~~----~--------------~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~ 750 (992)
| .|.+++++||. ++ +. . +.....++++| +|+||++..... ++.+ .|.
T Consensus 135 ~-~~va~~~~GG~---vv-~~G~~~~~~~~~~~~~~~~~~~~~~~~r~~~p-~~~~vlviP~~~-~t~~-----are--- 199 (324)
T TIGR00144 135 G-IGVASFEDGGF---IV-DGGHSSKEKSDFLPSSASSAKPAPVIARYDFP-DWNIILAIPEID-SVSG-----RRE--- 199 (324)
T ss_pred c-cceeeeeeCCE---EE-ECCcccccccccCcccccCCCCCCeEEecCCC-CcEEEEEecCCC-CCCc-----HHH---
Confidence 3 24578999994 33 31 1 11112345566 899999865543 3321 010
Q ss_pred cchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCC
Q 001947 751 MGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHND 830 (992)
Q Consensus 751 ~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~ 830 (992)
.+.|. .++.++.
T Consensus 200 ---------------------------------~~~lp------~~~~i~~----------------------------- 211 (324)
T TIGR00144 200 ---------------------------------VNIFQ------KYCPVPL----------------------------- 211 (324)
T ss_pred ---------------------------------HHHHH------hcCCCCH-----------------------------
Confidence 00000 0011111
Q ss_pred CceecCCCccccccccccccchhhhHHH--HHHHHHhccCChhHHHHHHHHHHH--------hhhhhhhcCCCCchHHHH
Q 001947 831 PVTVIDPKRTYFVRAPVCHPIYENFRVK--AFKALLTAAASDDQLTSLGELLYQ--------CHYSYSACGLGSDGTDRL 900 (992)
Q Consensus 831 ~~~~~~~~~~~~~~~r~~h~v~E~~Rv~--~~~~~l~~~~~~~d~~~lG~lm~~--------sH~slr~~~vs~~~lD~l 900 (992)
.. +.+..|+. .+..+|..+ |++.|++.|++ -|..||. +.+..+
T Consensus 212 -----------------~d-v~~~~~~~l~~l~~al~~~----d~~~~~~~l~d~~~~~f~~~~~~~r~-----~li~~~ 264 (324)
T TIGR00144 212 -----------------RD-VERICHLILMKMMPAVVEG----DLDAFGESVNEIQGLGFKKIERELQD-----PLIKRI 264 (324)
T ss_pred -----------------HH-HHHHHHHHHHHHHHHHHhc----CHHHHHHHHHHHHhhcchhhhccccC-----HHHHHH
Confidence 11 23334442 347778775 99999999986 4555553 455565
Q ss_pred HHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCce
Q 001947 901 VQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGK 975 (992)
Q Consensus 901 v~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~ 975 (992)
++.+++ ++|+-|||+| .||+++++++. +++.+++.+.|. ..+...++++. ...|+++
T Consensus 265 ~~~l~~-------------a~g~~iSGsG--PTv~al~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~n~Ga~v 323 (324)
T TIGR00144 265 IDSMIS-------------APGAGMSSFG--PTVYAVTDEKP--GNIAGAVADIFG-PYGVYGRIIVTKARNRGAFI 323 (324)
T ss_pred HHHHHh-------------ccCceecCCC--CeEEEEecCch--HHHHHHHHHHhh-hCCCceEEEEEccCCCCCEe
Confidence 555432 4889998766 99998887643 567777777664 56777888876 4567754
No 75
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.70 E-value=1.1e-15 Score=168.89 Aligned_cols=174 Identities=16% Similarity=0.153 Sum_probs=124.7
Q ss_pred eEEEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 001947 496 IFVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 570 (992)
Q Consensus 496 ~~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 570 (992)
.+.+.||+||||+ |--.| ||.-..+=..|+.+=.+.+.+.++.. +.+...
T Consensus 6 ~~~~~a~aKiNL~L~i~~kr~dGyH~l~s~~~~i~l~D~l~i~~~~~~~---------------------i~~~~~---- 60 (290)
T PRK14608 6 SLTEFAPAKINLALHVTGRRADGYHLLESLVAFADVGDRLTLEPAEALS---------------------LTVSGP---- 60 (290)
T ss_pred eEEEEeceeEEeeeccCCCCCCCCcceeEEEEECCCCcEEEEEECCCCc---------------------EEEeCC----
Confidence 4567899999986 44445 77777777788887777776554321 111100
Q ss_pred CCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHH
Q 001947 571 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 650 (992)
Q Consensus 571 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA 650 (992)
. . .. -+ .++.|+++.++..+.++.|... +|++|.|.++||+++|||||||
T Consensus 61 ------~--~-~~-------------------ip-~~~~Nlv~ka~~~~~~~~g~~~-~~~~i~i~k~IP~~~GLGsssa 110 (290)
T PRK14608 61 ------F--A-AG-------------------LG-DGDDNLVLRAARALRARVGPGL-PPGAFHLEKNLPVAAGIGGGSA 110 (290)
T ss_pred ------C--c-cC-------------------CC-CCCCcHHHHHHHHHHHHhCCCC-CceEEEEEeCCcCcCCchHHHH
Confidence 0 0 00 01 2358999998888777666332 6999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEe
Q 001947 651 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 730 (992)
Q Consensus 651 ~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~d 730 (992)
.++|++.+++.+++.+++++++.++|..+| .|-.++++||. .+........ ..++.++++.+++++
T Consensus 111 ~aaa~l~~l~~l~~~~ls~~el~~la~~ig----------~dv~~~l~gg~---~~~~g~g~~~-~~l~~~~~~~~vv~~ 176 (290)
T PRK14608 111 DAAAALRLLARLWGLALDDERLAALALSLG----------ADVPVCLDSRP---LIMRGIGEEL-TPLPGLPSLPAVLVN 176 (290)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhC----------CCcchhhcCCe---EEEEecCCEe-EECCCCCCcEEEEEC
Confidence 999999999999999999999999999864 37678999984 3333233222 445434578899999
Q ss_pred CCCccccC
Q 001947 731 SGIRHSVG 738 (992)
Q Consensus 731 sgi~~~~~ 738 (992)
++.+.+|.
T Consensus 177 p~~~~sT~ 184 (290)
T PRK14608 177 PGVPVATP 184 (290)
T ss_pred CCCCcChH
Confidence 88877664
No 76
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.69 E-value=6.5e-16 Score=170.01 Aligned_cols=164 Identities=16% Similarity=0.220 Sum_probs=115.4
Q ss_pred EEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCC
Q 001947 498 VARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSN 572 (992)
Q Consensus 498 ~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~ 572 (992)
.++||+||||+ |--.| ||.-.++-++|+.+-.+.+.+.++ .+ .+... .
T Consensus 4 ~~~a~aKiNl~L~i~~~~~dgyH~l~sl~~al~l~d~v~i~~~~~-~~---------------------~i~~~-----~ 56 (276)
T PRK14612 4 ERLAPAKVNLGLSVLGRREDGYHELHTLMVPLDVGDRLEVEPIAS-GL---------------------ELRVL-----G 56 (276)
T ss_pred EEeeCcEEeeccccCCCCCCCCceeEEEEEECCCCCEEEEEECCC-cE---------------------EEEcC-----C
Confidence 46899999985 65556 888899999999998888887542 11 11100 0
Q ss_pred CCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHH
Q 001947 573 RGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVE 652 (992)
Q Consensus 573 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~ 652 (992)
.++ + ....|.++.++..++++.|.. .|++|.|.++||+++|||||||.+
T Consensus 57 ---------~~~-------------------p-~~~~Nli~ka~~~~~~~~g~~--~~~~I~i~k~IP~~~GLGssSa~a 105 (276)
T PRK14612 57 ---------ADL-------------------P-TDERNLVYRAARAYLDAAGQP--GGVRITLEKRLPLAAGLGGGSSDA 105 (276)
T ss_pred ---------CCC-------------------C-CCCcccHHHHHHHHHHHhCCC--CCeEEEEEecCCCcCCCchHHHHH
Confidence 001 0 123567777777777777864 599999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCC
Q 001947 653 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 732 (992)
Q Consensus 653 va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsg 732 (992)
+|++.+++++++.+++ +.+++..+| .|...+++||. .+...+.... .+++. +.+.+++++++
T Consensus 106 aa~l~al~~l~~~~l~---l~~ia~~~g----------~dv~~~~~GG~---~~~~g~g~~~-~~l~~-~~~~~vv~~P~ 167 (276)
T PRK14612 106 AATLLALAQLYPAPVD---LPALALTLG----------ADVPFFLLGGA---AEARGVGERL-TPLEL-PPVPLVLVNPG 167 (276)
T ss_pred HHHHHHHHHHhCCChH---HHHHHHHhC----------CCcCeeeeCCe---EEEEecCccc-eEcCC-CCcEEEEECCC
Confidence 9999999999998775 455555443 27678889984 3332222222 44543 47889999888
Q ss_pred Ccccc
Q 001947 733 IRHSV 737 (992)
Q Consensus 733 i~~~~ 737 (992)
+..+|
T Consensus 168 ~~~sT 172 (276)
T PRK14612 168 VAVSA 172 (276)
T ss_pred CCCCH
Confidence 76654
No 77
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.67 E-value=1.4e-15 Score=165.96 Aligned_cols=116 Identities=10% Similarity=0.117 Sum_probs=89.7
Q ss_pred CchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccC
Q 001947 606 QKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVG 685 (992)
Q Consensus 606 ~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G 685 (992)
..|.|+++.++..+.++.+ . .|++|.+.++||.++|||||||..+|++.+++.+++.+++++++.++|.+++
T Consensus 61 ~~~~Nlv~~a~~~~~~~~~--~-~~~~i~i~k~IP~~aGLGssss~aaa~l~al~~~~~~~l~~~~l~~la~~iG----- 132 (269)
T PRK14609 61 DPEDNLVVKAYNLLKKDFP--L-PPVHIHLYKHIPIGAGLGGGSSDAAFMLKLLNDKFNLGLSDEELEAYAATLG----- 132 (269)
T ss_pred CccccHHHHHHHHHHHHcC--C-CCeEEEEecCCCCCCcccHHHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHhC-----
Confidence 3578999998887766555 3 5899999999999999999999999999999999999999999999999763
Q ss_pred CCCCccchhhhhccCcceEEEEeecCccceeeecCC-CCeEEEEEeCCCccccC
Q 001947 686 APCGVMDQMASACGEANKLLAMVCQPAELLGVVEIP-SHIRFWGIDSGIRHSVG 738 (992)
Q Consensus 686 ~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p-~~~~~vl~dsgi~~~~~ 738 (992)
+|...+++|+. .+...+.... .+++.+ +++.++++++++.-+|+
T Consensus 133 -----aDvpffl~g~~---a~~~G~Ge~l-~~l~~~~~~~~~vlv~P~~~~sT~ 177 (269)
T PRK14609 133 -----ADCAFFIRNKP---VYATGIGDIF-SPIDLSLSGYYIALVKPDIHVSTA 177 (269)
T ss_pred -----CCceEEccCCC---EEEEEeCCee-EECCCCCCCCEEEEECCCCCCChH
Confidence 37666666763 2333333222 455432 56789999988776664
No 78
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.65 E-value=6.7e-15 Score=163.08 Aligned_cols=171 Identities=15% Similarity=0.185 Sum_probs=120.1
Q ss_pred eEEEEcCcccccc----ccccc-cCCCeeeccccc-cceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccc
Q 001947 496 IFVARAPGRLDVM----GGIAD-YSGSLVLQMPIR-EACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSE 569 (992)
Q Consensus 496 ~~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~ 569 (992)
.+.+.||+||||+ |-..| ||.-.++-.+|+ .+-.+.+++.++.. +.+...+
T Consensus 6 ~~~~~apaKINL~L~v~~kr~DGyH~l~sl~~~i~~~~D~l~i~~~~~~~---------------------i~~~~~~-- 62 (296)
T PRK14615 6 AVTLRSGCKVNLDLRITGVRPDGYHEIDSLFLPLPEPHDELHVRVTDAPG---------------------ITVTCTI-- 62 (296)
T ss_pred eEEEEecceEEeccccCCcCCCCCcceEEEEEECCCCCcEEEEEECCCCC---------------------EEEEECC--
Confidence 3567999999986 66666 899999999998 47788887665322 2221100
Q ss_pred cCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHH
Q 001947 570 LSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSA 649 (992)
Q Consensus 570 ~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSA 649 (992)
.++ + .. .|.++.++..+.+..+.. .|++|.|.++||.++||||||
T Consensus 63 ---------~~~----------------------~-~~-~Nlv~~a~~~~~~~~~~~--~~~~i~i~k~IP~~~GLGsgs 107 (296)
T PRK14615 63 ---------PDL----------------------D-PE-RNTVTRAYTAFAAATGFR--PPLEVHLRKGIPHGAGLGGGS 107 (296)
T ss_pred ---------CCC----------------------C-CC-ccHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCCCCccHHH
Confidence 000 0 11 577777777777667754 689999999999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecC-CCCeEEEE
Q 001947 650 SVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWG 728 (992)
Q Consensus 650 A~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~-p~~~~~vl 728 (992)
|..+|++.+++.+++.+++.+++++++..+|.. +|.-+. ..+++.+|.+. .. +++++ ++++.+|+
T Consensus 108 a~aaa~l~al~~l~~~~l~~~~l~~~a~~~gaD---vPffl~-gg~a~~~G~Ge---------~~-~~l~~~~~~~~~vl 173 (296)
T PRK14615 108 ADAAALLRHLNSIAPHPLSPEALAKLAAGVGAD---VPFFLH-NVPCRATGIGE---------IL-TPVALGLSGWTLVL 173 (296)
T ss_pred HHHHHHHHHHHHHcCCCcCHHHHHHHHHHhCCC---Ceeecc-CCCEEEEeeEe---------EE-EECCCCCCCcEEEE
Confidence 999999999999999999999999999998863 442211 11233333221 11 34443 34677999
Q ss_pred EeCCCccccC
Q 001947 729 IDSGIRHSVG 738 (992)
Q Consensus 729 ~dsgi~~~~~ 738 (992)
+++++.-+|.
T Consensus 174 ~~P~~~vsT~ 183 (296)
T PRK14615 174 VCPEVQVSTP 183 (296)
T ss_pred ECCCCCcChH
Confidence 9888776664
No 79
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.63 E-value=1.6e-14 Score=157.93 Aligned_cols=168 Identities=14% Similarity=0.175 Sum_probs=121.3
Q ss_pred EEEEcCcccccccccc-----c-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEeccccc
Q 001947 497 FVARAPGRLDVMGGIA-----D-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSEL 570 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~-----d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~ 570 (992)
+.++||+||||++ |. | ||.-..+.++|+.+-++.+++.++.. +++.+
T Consensus 7 ~~~~apaKiNL~L-~v~~~r~dGyH~l~s~~~~i~l~D~v~i~~~~~~~---------------------~~i~~----- 59 (271)
T PRK00343 7 LDWPAPAKLNLFL-HITGRRADGYHELQTLFQFLDWGDTLHFEVRDDGE---------------------IRLLT----- 59 (271)
T ss_pred EEEeeeeeEEEEe-ecCCcCCCCCCeeeEEEEEcccceEEEEEECCCCc---------------------EEEeC-----
Confidence 4568999999999 53 2 56666788999999999998765432 12210
Q ss_pred CCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHH
Q 001947 571 SNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSAS 650 (992)
Q Consensus 571 ~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA 650 (992)
+..+ ...|.||++.++..+.+..+.. .|++|.|.++||+++|||||||
T Consensus 60 ---------~~~~---------------------~~~~~N~v~~a~~~l~~~~~~~--~~~~i~i~k~IP~gaGLGssSs 107 (271)
T PRK00343 60 ---------PIPG---------------------VPEEDNLIVRAARLLQKATGTP--LGADISLDKRLPMGGGLGGGSS 107 (271)
T ss_pred ---------CCCC---------------------CCCcccHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCcCCCCcchH
Confidence 0000 0246899999999877766754 5999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEe
Q 001947 651 VEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGID 730 (992)
Q Consensus 651 ~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~d 730 (992)
..+|++.+++.+++.++++++++++|.++|. | .+++++|. ..+........ .+++.| ...+++++
T Consensus 108 ~aaa~l~al~~l~~~~ls~~el~~la~~iga----------D-vp~~l~g~--~~~~~g~g~~~-~~l~~~-~~~~vl~~ 172 (271)
T PRK00343 108 DAATTLVALNRLWQLGLSRDELAELGLKLGA----------D-VPVFVRGH--AAFAEGIGEIL-TPVDLP-EKWYLVVK 172 (271)
T ss_pred HHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC----------C-ceEEecCC--cEEEEecCCEE-EECCCC-CcEEEEEe
Confidence 9999999999999999999999999998763 4 23444553 22333223222 445443 45578888
Q ss_pred CCCccccC
Q 001947 731 SGIRHSVG 738 (992)
Q Consensus 731 sgi~~~~~ 738 (992)
++++.+|.
T Consensus 173 p~~~~sT~ 180 (271)
T PRK00343 173 PGVHISTA 180 (271)
T ss_pred CCCCcChH
Confidence 88777664
No 80
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.60 E-value=6.1e-14 Score=155.42 Aligned_cols=213 Identities=9% Similarity=0.042 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCH-HHHHHHHHHHhccccCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHP-RDLALLCQKVENHIVGAP 687 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~-~el~~la~~~E~~~~G~~ 687 (992)
.|.++.++..+.++.+.. .|++|.|.++||.++|||||||..++++.+++..+++ +. +++.++|.++|
T Consensus 74 ~Nlv~ka~~~~~~~~~~~--~~v~I~i~K~IP~~aGLGggSs~Aaa~l~~l~~~~~l--~~~e~L~~lA~~lG------- 142 (297)
T PRK14613 74 QNILYKTFIKARSLFPEL--PGVKIHLTKRISPAGGLGGGSTNAASLLNFLFSWRNF--FTSDEMQVFAKEIG------- 142 (297)
T ss_pred cchHHHHHHHHHHHhCCC--CCeEEEEEeCCCccCCccccHHHHHHHHHHHHhcCCC--CcHHHHHHHHHHhC-------
Confidence 788988888887777754 6899999999999999999999988877777765544 44 67777998874
Q ss_pred CCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCcc
Q 001947 688 CGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQS 767 (992)
Q Consensus 688 ~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~ 767 (992)
.| .++++||. ..+....... ..++++|..+. +++..++.-+|.. .|
T Consensus 143 ---aD-vP~~l~G~--~a~~~g~Ge~-~~~l~~~~~~~-vlv~P~~~vsT~~-a~------------------------- 188 (297)
T PRK14613 143 ---SD-VPFFLGEG--HAFVTGKGEI-MEEIEVHKGQG-ILALTPQVMNTGE-MY------------------------- 188 (297)
T ss_pred ---Cc-cchhhcCC--eEEEecCCcE-EEEcCCCCCeE-EEEECCCCcChHH-HH-------------------------
Confidence 26 56666664 2334433322 35555555554 6666665544431 00
Q ss_pred CCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccc
Q 001947 768 LPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPV 847 (992)
Q Consensus 768 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 847 (992)
+.+|+.+. .+ ..
T Consensus 189 ------------------------------------------~~l~~~~~------------~~--------------~~ 200 (297)
T PRK14613 189 ------------------------------------------ALLKKPLQ------------ES--------------AS 200 (297)
T ss_pred ------------------------------------------Hhcchhhc------------cc--------------cc
Confidence 01111100 00 00
Q ss_pred cccchhhhHHHHHHHHHhccCChhHHHHHHHH-HHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceee
Q 001947 848 CHPIYENFRVKAFKALLTAAASDDQLTSLGEL-LYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKIT 926 (992)
Q Consensus 848 ~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~l-m~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Gaklt 926 (992)
. .+. +.|...+..+|..+ |++.++.. +|.- +.++.- -+|+++++.+.+.+ .|++|++||
T Consensus 201 ~-~~~-~~~~~~~~~al~~~----~~~~l~~~l~ndl-e~~~~~--l~P~~~~i~~~~~~-----------~Ga~~~~mS 260 (297)
T PRK14613 201 Q-KNG-NTLSEDLISSLKVG----DWVSLQGRLENDF-EPVAFQ--LHPELGVLKDKFLE-----------FGSSYCSLT 260 (297)
T ss_pred c-ccc-cccHHHHHHHHHcC----CHHHHHHHhcccc-hHHHHH--hCcHHHHHHHHHHH-----------cCCCEEEEE
Confidence 0 001 12344566777675 78877554 4666 555542 38999999998876 689999999
Q ss_pred ccccCceEEEEccCCcccHHHHHHHHHHHH
Q 001947 927 GGGSGGTICVIGRNSLRSSEQVLEIQQRYK 956 (992)
Q Consensus 927 GaG~GG~vi~l~~~~~~~~~~~~~i~~~y~ 956 (992)
|+| +||+.+.++...++++.+.+++.|.
T Consensus 261 GSG--ptvf~l~~~~~~a~~~~~~l~~~~~ 288 (297)
T PRK14613 261 GSG--SSMYGLVQGLEIQEELLPRLRQEFS 288 (297)
T ss_pred ccc--cceEEEeCCHHHHHHHHHHHHHhhc
Confidence 996 9999888654444555666665554
No 81
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry []. The function of this domain appears to be to bind galactose [], and it is normally located at the N terminus of these enzymes []. It is associated with IPR013750 from INTERPRO and IPR006204 from INTERPRO. While all enzymes in this entry posses galactokinase activity, some are annotated as N-acetylgalactosamine kinases as they also posses this enzyme activity.; PDB: 1PIE_A 1WUU_A 1S4E_D 2A2C_A 2A2D_A 2AJ4_A 2DEJ_A 2CZ9_A 2DEI_A 3V5R_A ....
Probab=99.60 E-value=3.2e-16 Score=124.65 Aligned_cols=51 Identities=35% Similarity=0.530 Sum_probs=42.3
Q ss_pred HHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEec
Q 001947 484 KAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKI 535 (992)
Q Consensus 484 ~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~ 535 (992)
+.|...|+.+++ ++++|||||+|||||+||+||.||||||++++++++++|
T Consensus 2 ~~F~~~fg~~p~-~~~~APGRvnliGeHtDy~gG~Vl~~Ai~~~~~~a~~~r 52 (52)
T PF10509_consen 2 EEFEEFFGEEPE-VVASAPGRVNLIGEHTDYNGGFVLPAAIDLRTYVAVSPR 52 (52)
T ss_dssp HHHHHHHSS--S-EEEEEEEEEEEE-TT-GGGT-EEEEEEEEEEEEEEEEEE
T ss_pred hhHHHHhCCCCC-EEEECCceEEecCcccccCCCeEEEEEeeccEEEEEEcC
Confidence 467888997555 699999999999999999999999999999999999986
No 82
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.58 E-value=3.1e-14 Score=148.56 Aligned_cols=259 Identities=18% Similarity=0.158 Sum_probs=156.9
Q ss_pred CCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccH
Q 001947 24 GHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPR 103 (992)
Q Consensus 24 g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (992)
..|+||++|++.||++|.++|..+.|++...-.. .++ ++ ++ ++ ..
T Consensus 12 ~iGmGHV~R~l~LA~~l~k~~~~~~fl~k~~~e~---~~~-------~~-~~-~f------~~----------------- 56 (318)
T COG3980 12 EIGMGHVMRTLTLARELEKRGFACLFLTKQDIEA---IIH-------KV-YE-GF------KV----------------- 56 (318)
T ss_pred ccCcchhhhHHHHHHHHHhcCceEEEecccchhh---hhh-------hh-hh-hc------cc-----------------
Confidence 3579999999999999999999999997643000 000 00 00 00 00
Q ss_pred HHhHHHHHHHHHcCCCcEEEECCCchHH----HHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHh---hcc
Q 001947 104 KSILKDEVEWLNSIKADLVVSDVVPVAC----RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE---DYS 176 (992)
Q Consensus 104 ~~~l~~~~~~L~~~kPDlVVsD~~~~a~----~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~---~y~ 176 (992)
...+....|++.|+|++|.|++-+.. .....++.+.+.+++....... + .+.+++++.. .|.
T Consensus 57 --~~~~~~n~ik~~k~d~lI~Dsygl~~dd~k~ik~e~~~k~l~fDd~~~~~~~--d-------~d~ivN~~~~a~~~y~ 125 (318)
T COG3980 57 --LEGRGNNLIKEEKFDLLIFDSYGLNADDFKLIKEEAGSKILIFDDENAKSFK--D-------NDLIVNAILNANDYYG 125 (318)
T ss_pred --eeeecccccccccCCEEEEeccCCCHHHHHHHHHHhCCcEEEecCCCccchh--h-------hHhhhhhhhcchhhcc
Confidence 00011225789999999999866544 3444678999999765421111 0 1222333221 111
Q ss_pred ----ccceeeecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHhhCCCCcE
Q 001947 177 ----HCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEYLPSGWK 249 (992)
Q Consensus 177 ----~~d~ll~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~l~~~~~~ 249 (992)
++..++++. +.|++.+ ....+++..+ .+..-|++++||.... .+++..|.+.++.
T Consensus 126 ~v~~k~~~~lGp~------------y~~lr~e-F~~~r~~~~~-----r~~r~ilI~lGGsDpk~lt~kvl~~L~~~~~n 187 (318)
T COG3980 126 LVPNKTRYYLGPG------------YAPLRPE-FYALREENTE-----RPKRDILITLGGSDPKNLTLKVLAELEQKNVN 187 (318)
T ss_pred ccCcceEEEecCC------------ceeccHH-HHHhHHHHhh-----cchheEEEEccCCChhhhHHHHHHHhhccCee
Confidence 011111111 1111111 1112333322 1344589999988774 3555566554543
Q ss_pred E-EEeCCCCCC---------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHH
Q 001947 250 C-LVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNM 319 (992)
Q Consensus 250 ~-Vv~G~~~~~---------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~ 319 (992)
+ +|.|...+. ..+|+..+-++.+|+.+|..||+.|+.+| .|++|+++.|+|.++++... -|-.-|++
T Consensus 188 l~iV~gs~~p~l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~aI~AaG-stlyEa~~lgvP~l~l~~a~--NQ~~~a~~ 264 (318)
T COG3980 188 LHIVVGSSNPTLKNLRKRAEKYPNINLYIDTNDMAELMKEADLAISAAG-STLYEALLLGVPSLVLPLAE--NQIATAKE 264 (318)
T ss_pred EEEEecCCCcchhHHHHHHhhCCCeeeEecchhHHHHHHhcchheeccc-hHHHHHHHhcCCceEEeeec--cHHHHHHH
Confidence 3 456755543 25778877778899999999999999777 89999999999999999554 45567899
Q ss_pred HHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 320 LEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 320 le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++..|+-..+..- +.+......+.++.++.
T Consensus 265 f~~lg~~~~l~~~-l~~~~~~~~~~~i~~d~ 294 (318)
T COG3980 265 FEALGIIKQLGYH-LKDLAKDYEILQIQKDY 294 (318)
T ss_pred HHhcCchhhccCC-CchHHHHHHHHHhhhCH
Confidence 9999987776543 44455556666666544
No 83
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=99.53 E-value=3.7e-13 Score=155.54 Aligned_cols=319 Identities=17% Similarity=0.130 Sum_probs=170.8
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (992)
|+|++ +.|.-.||+.++. ++++|+++++++.|++.....+....+.. .+.+.. +.+.. .+..+
T Consensus 2 ~ki~i-~~Ggt~G~i~~a~-l~~~L~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------l~~~g--~~~~~ 64 (380)
T PRK00025 2 LRIAI-VAGEVSGDLLGAG-LIRALKARAPNLEFVGVGGPRMQAAGCES-LFDMEE------------LAVMG--LVEVL 64 (380)
T ss_pred ceEEE-EecCcCHHHHHHH-HHHHHHhcCCCcEEEEEccHHHHhCCCcc-ccCHHH------------hhhcc--HHHHH
Confidence 35543 4455579999999 99999999899988764332222222210 000000 00000 01111
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEEC-CC-chH--HHHHHHcCCcEEEE-ecCchhHHHHHHHhhhccchHHHHHH
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSD-VV-PVA--CRAAADAGIRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQ 170 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD-~~-~~a--~~aA~~~gIP~v~i-s~~~~~~~~~~~~~~~~~~~~~i~~~ 170 (992)
...+ .....+....++|++++||+|++. +. .+. ..+++..+||++.+ ++..|... ... ...
T Consensus 65 ~~~~--~~~~~~~~~~~~l~~~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~~-~~~-----------~~~ 130 (380)
T PRK00025 65 PRLP--RLLKIRRRLKRRLLAEPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAWR-QGR-----------AFK 130 (380)
T ss_pred HHHH--HHHHHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhcC-chH-----------HHH
Confidence 1111 112245566888999999999864 21 233 33466789998876 33222100 000 000
Q ss_pred HHhhccccceeeec-CCCC----CCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCChh-----hH
Q 001947 171 IAEDYSHCEFLIRL-PGYC----PMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW-----KL 239 (992)
Q Consensus 171 l~~~y~~~d~ll~~-~~~~----~~p~~~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~-----~l 239 (992)
+. ..++.++.. +... .......+++.|..... ....+..+++.+++++++++|++..||.+... .+
T Consensus 131 ~~---~~~d~i~~~~~~~~~~~~~~g~~~~~~G~p~~~~~~~~~~~~~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l 207 (380)
T PRK00025 131 IA---KATDHVLALFPFEAAFYDKLGVPVTFVGHPLADAIPLLPDRAAARARLGLDPDARVLALLPGSRGQEIKRLLPPF 207 (380)
T ss_pred HH---HHHhhheeCCccCHHHHHhcCCCeEEECcCHHHhcccccChHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 00 001111110 0000 00000112333332211 11235567788998888888788888766531 12
Q ss_pred HHh---hC--CCCcEEEEeCC-CCC-C--------C-CCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 001947 240 KEE---YL--PSGWKCLVCGA-SDS-Q--------L-PPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (992)
Q Consensus 240 l~~---l~--~~~~~~Vv~G~-~~~-~--------l-~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V 303 (992)
++. +. .+++.+++.|. ... + . .-++.+. ..+++++|++||++|+.+|.+|+ |++++|+|+|
T Consensus 208 ~~a~~~l~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~aDl~v~~sG~~~l-Ea~a~G~PvI 284 (380)
T PRK00025 208 LKAAQLLQQRYPDLRFVLPLVNPKRREQIEEALAEYAGLEVTLL--DGQKREAMAAADAALAASGTVTL-ELALLKVPMV 284 (380)
T ss_pred HHHHHHHHHhCCCeEEEEecCChhhHHHHHHHHhhcCCCCeEEE--cccHHHHHHhCCEEEECccHHHH-HHHHhCCCEE
Confidence 221 21 23566666543 221 1 1 2244443 35789999999999999997776 9999999999
Q ss_pred EEeCCCCCChHHHHHH------------HHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc-----------C-CCCH
Q 001947 304 FVRRDYFNEEPFLRNM------------LEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE-----------G-GING 359 (992)
Q Consensus 304 ~iP~~~~~EQ~~NA~~------------le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~-----------~-~~~G 359 (992)
++|..+.. +...++. +.+.+++..+..++.+++.+.+.+.++++++..+. . ..++
T Consensus 285 ~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~a 363 (380)
T PRK00025 285 VGYKVSPL-TFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQQLRCGA 363 (380)
T ss_pred EEEccCHH-HHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCCH
Confidence 99743211 1122333 33333344444456678899999999998775321 1 5578
Q ss_pred HHHHHHHHHHHHc
Q 001947 360 GEVAAHILQETAI 372 (992)
Q Consensus 360 ~~~aA~~I~~~~~ 372 (992)
++++++.|.+.+.
T Consensus 364 ~~~~~~~i~~~~~ 376 (380)
T PRK00025 364 DERAAQAVLELLK 376 (380)
T ss_pred HHHHHHHHHHHhh
Confidence 8888888887654
No 84
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.53 E-value=3.9e-15 Score=151.59 Aligned_cols=128 Identities=18% Similarity=0.160 Sum_probs=95.5
Q ss_pred EEEEEcCCCCCh--hh----HHHhhCCC--Cc-EEEEeCCCCCC--------CCCCeEEcCCCCCHHHHHhhcCEEEecC
Q 001947 225 LLILNFGGQPAG--WK----LKEEYLPS--GW-KCLVCGASDSQ--------LPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (992)
Q Consensus 225 ~Vlvs~Gg~~~~--~~----ll~~l~~~--~~-~~Vv~G~~~~~--------l~~nv~v~~f~~~~p~lL~aaDlvIt~~ 287 (992)
+|||++||.+.+ .. .+..+... .+ .++++|....+ ...++.+++|+++|+++|+.||++|||+
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~~~~~~~~~~~~~v~~~~~~~~m~~~m~~aDlvIs~a 80 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYEELKIKVENFNPNVKVFGFVDNMAELMAAADLVISHA 80 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECHHHCCCHCCTTCCCEEECSSSSHHHHHHHHSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHHHHHHHHhccCCcEEEEechhhHHHHHHHcCEEEeCC
Confidence 489999998874 11 11111111 23 44578876432 2368999999999999999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCCC--ChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC
Q 001947 288 GYGTVSEALAYKLPFVFVRRDYFN--EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC 352 (992)
Q Consensus 288 G~~Tv~Eal~~GvP~V~iP~~~~~--EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~ 352 (992)
|++|++|++++|+|+|++|.+... +|..|+..+++.|++..+...+.+.+.|.+.|.+++.++..
T Consensus 81 G~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~~~~~~~~~~L~~~i~~l~~~~~~ 147 (167)
T PF04101_consen 81 GAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIMLDESELNPEELAEAIEELLSDPEK 147 (167)
T ss_dssp -CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCSECCC-SCCCHHHHHHCHCCCHH-
T ss_pred CccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCccccCcccCCHHHHHHHHHHHHcCcHH
Confidence 999999999999999999987643 89999999999999999998888788999999999876644
No 85
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=99.52 E-value=3.6e-12 Score=152.74 Aligned_cols=154 Identities=18% Similarity=0.227 Sum_probs=107.2
Q ss_pred CCCceeecCcccccCCC----ChHHHHHHhCCCCCCcEEEEEcCCCCC----hh----hHHHhhCCC-CcEEEEe--CCC
Q 001947 192 AFRDVIDVPLVVRRLHK----SRKEVRKELGIEDDVKLLILNFGGQPA----GW----KLKEEYLPS-GWKCLVC--GAS 256 (992)
Q Consensus 192 ~~~~v~~vp~~~~~~~~----~r~e~r~~l~~~~d~~~Vlvs~Gg~~~----~~----~ll~~l~~~-~~~~Vv~--G~~ 256 (992)
..+++..+|++...... ...+|.+.+... ...+||+|+||... +. .+...+... ++.|++. +..
T Consensus 243 ~~~~v~~IG~l~~~~~~~~~~~~~~wl~~~~~~-~~~vvyvSfGS~~~~~~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~ 321 (496)
T KOG1192|consen 243 LLPKVIPIGPLHVKDSKQKSPLPLEWLDILDES-RHSVVYISFGSMVNSADLPEEQKKELAKALESLQGVTFLWKYRPDD 321 (496)
T ss_pred CCCCceEECcEEecCccccccccHHHHHHHhhc-cCCeEEEECCcccccccCCHHHHHHHHHHHHhCCCceEEEEecCCc
Confidence 34668888887653211 234565554321 34799999999873 22 233344443 5554443 221
Q ss_pred C----CCC----CCCeEEcCCCCCHH--HHH---hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc
Q 001947 257 D----SQL----PPNFIKLPKDAYTP--DFM---AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY 323 (992)
Q Consensus 257 ~----~~l----~~nv~v~~f~~~~p--~lL---~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~ 323 (992)
. +.+ +.||...+ |+| ++| ++..+||||||+||++|++++|||||++| .+.||+.||+++++.
T Consensus 322 ~~~~~~~~~~~~~~nV~~~~---W~PQ~~lll~H~~v~~FvTHgG~nSt~E~~~~GvP~v~~P--lf~DQ~~Na~~i~~~ 396 (496)
T KOG1192|consen 322 SIYFPEGLPNRGRGNVVLSK---WAPQNDLLLDHPAVGGFVTHGGWNSTLESIYSGVPMVCVP--LFGDQPLNARLLVRH 396 (496)
T ss_pred chhhhhcCCCCCcCceEEec---CCCcHHHhcCCCcCcEEEECCcccHHHHHHhcCCceecCC--ccccchhHHHHHHhC
Confidence 1 123 23676664 666 443 34789999999999999999999999998 789999999999999
Q ss_pred CcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 324 QGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 324 G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
|.+.+....+++...+..++.++++++.
T Consensus 397 g~~~v~~~~~~~~~~~~~~~~~il~~~~ 424 (496)
T KOG1192|consen 397 GGGGVLDKRDLVSEELLEAIKEILENEE 424 (496)
T ss_pred CCEEEEehhhcCcHHHHHHHHHHHcChH
Confidence 9999998888776668888888887553
No 86
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2.7.1.6 from EC), homoserine (2.7.1.39 from EC), mevalonate (2.7.1.36 from EC) and phosphomevalonate (2.7.4.2 from EC) kinases contain, in their N-terminal section, a conserved Gly/Ser-rich region which is probably involved in the binding of ATP [, ]. This group of kinases has been called 'GHMP' (from the first letter of their substrates).; GO: 0005524 ATP binding, 0016301 kinase activity, 0016310 phosphorylation; PDB: 3F0N_B 1PIE_A 2AJ4_A 1K47_E 3GON_A 2R3V_C 3HUL_A 1KVK_A 2R42_A 3D4J_A ....
Probab=99.43 E-value=2.4e-13 Score=116.10 Aligned_cols=67 Identities=39% Similarity=0.607 Sum_probs=63.7
Q ss_pred EEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccC
Q 001947 632 SMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGE 700 (992)
Q Consensus 632 ~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg 700 (992)
+|+|+|+||.++|||||||+.+|++.+++.+++.++++++++++++.+|+.+ |.++| +|+++++|||
T Consensus 1 ~i~i~s~iP~~~GLgSSaa~~~a~~~a~~~~~~~~~~~~~l~~~a~~~e~~~-g~~~g-~d~~~~~~GG 67 (67)
T PF00288_consen 1 DIEIDSNIPPGSGLGSSAALAVALAAALNKLFGLPLSKEELAKLAQEAERYI-GKPSG-IDDAASAYGG 67 (67)
T ss_dssp EEEEEESSTTTSSSSHHHHHHHHHHHHHHHHTTTSSBHHHHHHHHHHHHHHC-SSSHS-HHHHHHHHCS
T ss_pred CeEEEccCCCCCcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHc-CCCCh-hhHHHHHhCc
Confidence 5899999999999999999999999999999999999999999999999877 99988 5789999997
No 87
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.39 E-value=2.5e-11 Score=140.52 Aligned_cols=317 Identities=13% Similarity=0.113 Sum_probs=175.1
Q ss_pred CcccHHHHHHHHHHHHH--CCCcEE---EEeCCCCcccccccCCCceeeeeecccCCcccccccc-cChHHHHHHHHHHh
Q 001947 26 GFGHATRVVEVVRNLIS--AGHDVH---VVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALT-VDRLASLEKYSETA 99 (992)
Q Consensus 26 G~GHv~r~laLA~~L~~--~GheV~---~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~ 99 (992)
|.|--.-+++||++|++ .|++|. +++....+ ....++..+ .+.. ... .++. ......+.....
T Consensus 6 ghged~~a~ai~~~l~~~~~~~~v~~~p~vG~~~~~-e~~~ip~~g-~~~~--~~s-----gg~~~~~~~~~~~~~~~-- 74 (396)
T TIGR03492 6 GHGEDLIAARIAKALLQLSPDLNLEALPLVGEGRAY-QNLGIPIIG-PTKE--LPS-----GGFSYQSLRGLLRDLRA-- 74 (396)
T ss_pred CchHHHHHHHHHHHHHhhCCCCCeEEeCcccCCHHH-hhCCCceeC-CCCC--CCC-----CCccCCCHHHHHHHHHh--
Confidence 45667778999999998 599999 88654322 222232100 0100 111 1111 111122222222
Q ss_pred hccHHHhHHHHHHHHHcC--CCcEEEECCCchHHHHHHHcCCcEEE---E-ecCchhH-----HHHHHHhhhccchHHH-
Q 001947 100 VAPRKSILKDEVEWLNSI--KADLVVSDVVPVACRAAADAGIRSVC---V-TNFSWDF-----IYAEYVMAAGHHHRSI- 167 (992)
Q Consensus 100 ~~~~~~~l~~~~~~L~~~--kPDlVVsD~~~~a~~aA~~~gIP~v~---i-s~~~~~~-----~~~~~~~~~~~~~~~i- 167 (992)
..-....+...+++++ |||+|++.-.+....+|+..|+|++. . +|+.|.. ..+.|..-.+..+..+
T Consensus 75 --gl~~~~~~~~~~~~~~~~~p~~v~~~Gg~v~~~aA~~~~~p~~~~~~~esn~~~~~~~~~~~~~~~~~~~G~~~~p~e 152 (396)
T TIGR03492 75 --GLVGLTLGQWRALRKWAKKGDLIVAVGDIVPLLFAWLSGKPYAFVGTAKSDYYWESGPRRSPSDEYHRLEGSLYLPWE 152 (396)
T ss_pred --hHHHHHHHHHHHHHHHhhcCCEEEEECcHHHHHHHHHcCCCceEEEeeccceeecCCCCCccchhhhccCCCccCHHH
Confidence 1222345556788888 99999987655588899999999988 3 5555321 0000100011110100
Q ss_pred HHHHHhhccccceeeecCCCCCCC------CCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh----h
Q 001947 168 VWQIAEDYSHCEFLIRLPGYCPMP------AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG----W 237 (992)
Q Consensus 168 ~~~l~~~y~~~d~ll~~~~~~~~p------~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~----~ 237 (992)
.+.+...+ ++.++ .++..... ....+++.|.........+ .+++++.++|++..||.+.. .
T Consensus 153 ~n~l~~~~--a~~v~-~~~~~t~~~l~~~g~k~~~vGnPv~d~l~~~~~------~~l~~~~~~lllLpGSR~ae~~~~l 223 (396)
T TIGR03492 153 RWLMRSRR--CLAVF-VRDRLTARDLRRQGVRASYLGNPMMDGLEPPER------KPLLTGRFRIALLPGSRPPEAYRNL 223 (396)
T ss_pred HHHhhchh--hCEEe-CCCHHHHHHHHHCCCeEEEeCcCHHhcCccccc------cccCCCCCEEEEECCCCHHHHHccH
Confidence 11222111 22222 11100000 0112344444332211111 15566778899999998764 1
Q ss_pred -hHHH---hhCC-CCcEEEE-e-CCCCCC-----C-----C--------------CCeEEcCCCCCHHHHHhhcCEEEec
Q 001947 238 -KLKE---EYLP-SGWKCLV-C-GASDSQ-----L-----P--------------PNFIKLPKDAYTPDFMAASDCMLGK 286 (992)
Q Consensus 238 -~ll~---~l~~-~~~~~Vv-~-G~~~~~-----l-----~--------------~nv~v~~f~~~~p~lL~aaDlvIt~ 286 (992)
.+++ .+.. .++.+++ + |....+ + . .++.+..|..+++++|++||++|+.
T Consensus 224 p~~l~al~~L~~~~~~~~v~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ADlvI~r 303 (396)
T TIGR03492 224 KLLLRALEALPDSQPFVFLAAIVPSLSLEKLQAILEDLGWQLEGSSEDQTSLFQKGTLEVLLGRGAFAEILHWADLGIAM 303 (396)
T ss_pred HHHHHHHHHHhhCCCeEEEEEeCCCCCHHHHHHHHHhcCceecCCccccchhhccCceEEEechHhHHHHHHhCCEEEEC
Confidence 2222 2321 3555543 3 432211 1 1 1356667767789999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc----CcEEEEecCCCChhhHHHHHHHHhhCCCCcc--------
Q 001947 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY----QGGVEMIRRDLLTGHWKPYLERAISLKPCYE-------- 354 (992)
Q Consensus 287 ~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~----G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~-------- 354 (992)
+|..| .|++++|+|+|++|.+. .| .|+..+++. |.++.+...+ ++.+.+.+.++++++..+.
T Consensus 304 SGt~T-~E~a~lg~P~Ilip~~~--~q-~na~~~~~~~~l~g~~~~l~~~~--~~~l~~~l~~ll~d~~~~~~~~~~~~~ 377 (396)
T TIGR03492 304 AGTAT-EQAVGLGKPVIQLPGKG--PQ-FTYGFAEAQSRLLGGSVFLASKN--PEQAAQVVRQLLADPELLERCRRNGQE 377 (396)
T ss_pred cCHHH-HHHHHhCCCEEEEeCCC--CH-HHHHHHHhhHhhcCCEEecCCCC--HHHHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99656 99999999999999643 35 599888874 7777765443 4788899999987654221
Q ss_pred --CCCCHHHHHHHHHHHH
Q 001947 355 --GGINGGEVAAHILQET 370 (992)
Q Consensus 355 --~~~~G~~~aA~~I~~~ 370 (992)
...++++++++.|.+.
T Consensus 378 ~lg~~~a~~~ia~~i~~~ 395 (396)
T TIGR03492 378 RMGPPGASARIAESILKQ 395 (396)
T ss_pred hcCCCCHHHHHHHHHHHh
Confidence 3557777787777653
No 88
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.36 E-value=3.5e-11 Score=132.71 Aligned_cols=167 Identities=17% Similarity=0.183 Sum_probs=114.4
Q ss_pred EEEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.+.||+||||+ |-..| ||.-..+-++|+.+=.+.+.+.++.. .+.+..
T Consensus 4 ~~~~apAKINL~L~v~g~r~dGyH~l~s~~~~i~l~D~l~i~~~~~~~--------------------~~~~~~------ 57 (283)
T PRK14610 4 FLVKAPAKINLFLHIVGKSESGYHLLESLFVFVNLYDFLEIKIGSKNR--------------------GVEFVN------ 57 (283)
T ss_pred eEEeecceEEeeeccCCcCCCCcchhheeeEEcCCCCEEEEEECCCCC--------------------eEEEeC------
Confidence 467899999986 55555 77777777788887777777653210 011110
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
+. . .... .|+++.++..+++..+.. .|++|.|.++||.++|||||||.
T Consensus 58 --------~~-~--------------------~~~~-~Nlv~kA~~~l~~~~~~~--~g~~i~i~K~IP~~aGLGggSs~ 105 (283)
T PRK14610 58 --------SL-K--------------------INRY-NNTVQRAIGLLLRHSPVR--TNVYVKVIKNIPVSAGLAGGSAD 105 (283)
T ss_pred --------CC-C--------------------CCCC-CcHHHHHHHHHHHHhCCC--CCeEEEEEcCCCCCCcCCccHHH
Confidence 00 0 0011 788888888887777754 59999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecC-CCCeEEEEEe
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI-PSHIRFWGID 730 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~-p~~~~~vl~d 730 (992)
.+|++.+++++++ ++.+++.+++..+ | .|--.+++||. .+....... .++++. +....++++.
T Consensus 106 aaa~L~~ln~l~~--ls~~~l~~ia~~l---------G-aDvPffl~g~~---a~~~G~Ge~-l~~l~~~~~~~~~vl~~ 169 (283)
T PRK14610 106 AAAVIRLLGKLWG--IDEQILNELALSV---------G-SDVPACLDSKT---LFVRGIGED-ILLLPDLSLPTYVVLVA 169 (283)
T ss_pred HHHHHHHHHHHhC--CCHHHHHHHHHHh---------C-CCCcEEEECCe---EEEEecccE-EEECcccCCCCeEEEEE
Confidence 9999999999996 6999999999862 4 48888888874 344444422 244432 1233467775
Q ss_pred C-CCcccc
Q 001947 731 S-GIRHSV 737 (992)
Q Consensus 731 s-gi~~~~ 737 (992)
. ++.-+|
T Consensus 170 p~~~~~sT 177 (283)
T PRK14610 170 PKGKFLST 177 (283)
T ss_pred CCCCccCh
Confidence 4 444343
No 89
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=99.33 E-value=5.3e-11 Score=129.78 Aligned_cols=110 Identities=15% Similarity=0.130 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+.+..|.+ .|++|.|.++||+++|||||||-.+|++.+++++++.+++++++.++|.++|.
T Consensus 61 ~Nlv~ra~~~l~~~~g~~--~~v~I~i~K~IP~gaGLGggSS~aAa~L~~ln~l~~~~ls~~eL~~lA~~lGa------- 131 (288)
T PRK00650 61 SNSIWKSVALFRRYTGIT--TPVSWRVVKQIPIGAGLAGGSSNAATALFALNQIFQTGLSDEELRSLAEKIGM------- 131 (288)
T ss_pred ccHHHHHHHHHHHHhCCC--CCeEEEEeeCCCCcCCcCcchhHHHHHHHHHHHHhCCCcCHHHHHHHHHHhCC-------
Confidence 788888888877777765 59999999999999999999999999999999999999999999999999885
Q ss_pred CccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCc
Q 001947 689 GVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIR 734 (992)
Q Consensus 689 G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~ 734 (992)
|--.++.||. + +..... +..+.++.+++..++++..+..
T Consensus 132 ---DvPffl~~g~--a-~~~G~G-e~l~~~~~~~~~~~vlv~P~~~ 170 (288)
T PRK00650 132 ---DTPFFFSTGS--A-LGVGRG-EKIIALEESVSDRYVLYFSSEG 170 (288)
T ss_pred ---cchhhhcCce--E-EEEecC-CEEEECcCCCCceEEEEeCCCC
Confidence 2223333342 2 222233 2224555445567888765443
No 90
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.29 E-value=6.6e-10 Score=132.10 Aligned_cols=307 Identities=15% Similarity=0.033 Sum_probs=162.1
Q ss_pred CccEEEEEeccCC---C-cccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccCh
Q 001947 13 SKHLVFAYYVTGH---G-FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDR 88 (992)
Q Consensus 13 m~~~~Il~~v~g~---G-~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (992)
+++|+|+.++... . .|=.++...++++|.++||+|++++..+... .. . ..+.+... .... .+.
T Consensus 56 ~~~mrI~~~~~~~~~~~~gG~~~~~~~l~~~L~~~G~eV~vlt~~~~~~-~~-~--~g~~v~~~-~~~~--------~~~ 122 (465)
T PLN02871 56 SRPRRIALFVEPSPFSYVSGYKNRFQNFIRYLREMGDEVLVVTTDEGVP-QE-F--HGAKVIGS-WSFP--------CPF 122 (465)
T ss_pred CCCceEEEEECCcCCcccccHHHHHHHHHHHHHHCCCeEEEEecCCCCC-cc-c--cCceeecc-CCcC--------Ccc
Confidence 6677887765322 1 3445788999999999999999998754211 00 0 01111000 0000 000
Q ss_pred HHHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCCc----hHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccch
Q 001947 89 LASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 164 (992)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~----~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~ 164 (992)
.... ...+. ......+++++.+||+|++.... .+..+++..++|+|...+..+......+.. ....
T Consensus 123 ~~~~--~~~~~------~~~~l~~~i~~~kpDiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~--~~~~ 192 (465)
T PLN02871 123 YQKV--PLSLA------LSPRIISEVARFKPDLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTF--SWLV 192 (465)
T ss_pred CCCc--eeecc------CCHHHHHHHHhCCCCEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccc--hhhH
Confidence 0000 00000 01134567788999999876532 234567788999886422111100000000 0000
Q ss_pred HHHHHHHHhhccccceeeecCCC---------CCCCCCCceeecCccccc--CCCChHHHHHHhCC-CCCCcEEEEEcCC
Q 001947 165 RSIVWQIAEDYSHCEFLIRLPGY---------CPMPAFRDVIDVPLVVRR--LHKSRKEVRKELGI-EDDVKLLILNFGG 232 (992)
Q Consensus 165 ~~i~~~l~~~y~~~d~ll~~~~~---------~~~p~~~~v~~vp~~~~~--~~~~r~e~r~~l~~-~~d~~~Vlvs~Gg 232 (992)
..+.......+..++.++..... ...+....+.+.|+.... +.....+.+..+.. .+++ .++++.|+
T Consensus 193 ~~~~~~~r~~~~~ad~ii~~S~~~~~~l~~~~~~~~~kv~vi~nGvd~~~f~p~~~~~~~~~~~~~~~~~~-~~i~~vGr 271 (465)
T PLN02871 193 KPMWDIIRFLHRAADLTLVTSPALGKELEAAGVTAANRIRVWNKGVDSESFHPRFRSEEMRARLSGGEPEK-PLIVYVGR 271 (465)
T ss_pred HHHHHHHHHHHhhCCEEEECCHHHHHHHHHcCCCCcCeEEEeCCccCccccCCccccHHHHHHhcCCCCCC-eEEEEeCC
Confidence 00000011122233333321110 000111123334443221 11223345555432 2344 45677788
Q ss_pred CCCh--hh-HHHhhC-CCCcEEEEeCCCCCC-------CCCCeEEcCCC--CCHHHHHhhcCEEEecCC----hhHHHHH
Q 001947 233 QPAG--WK-LKEEYL-PSGWKCLVCGASDSQ-------LPPNFIKLPKD--AYTPDFMAASDCMLGKIG----YGTVSEA 295 (992)
Q Consensus 233 ~~~~--~~-ll~~l~-~~~~~~Vv~G~~~~~-------l~~nv~v~~f~--~~~p~lL~aaDlvIt~~G----~~Tv~Ea 295 (992)
.+.. .. +++.+. .+++.++++|.+... -..++++.|++ ++++++|+.||++|..+. ..++.||
T Consensus 272 l~~~K~~~~li~a~~~~~~~~l~ivG~G~~~~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv~V~pS~~E~~g~~vlEA 351 (465)
T PLN02871 272 LGAEKNLDFLKRVMERLPGARLAFVGDGPYREELEKMFAGTPTVFTGMLQGDELSQAYASGDVFVMPSESETLGFVVLEA 351 (465)
T ss_pred CchhhhHHHHHHHHHhCCCcEEEEEeCChHHHHHHHHhccCCeEEeccCCHHHHHHHHHHCCEEEECCcccccCcHHHHH
Confidence 7763 22 223221 146788888865421 13578889988 468899999999997553 3579999
Q ss_pred HHcCCcEEEEeCCCCCChHHHHHHHHH---cCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 296 LAYKLPFVFVRRDYFNEEPFLRNMLEF---YQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 296 l~~GvP~V~iP~~~~~EQ~~NA~~le~---~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
|++|+|+|+.+..+..| .+++ .+.|..++..+ ++.+.++|.++++++.
T Consensus 352 mA~G~PVI~s~~gg~~e------iv~~~~~~~~G~lv~~~d--~~~la~~i~~ll~~~~ 402 (465)
T PLN02871 352 MASGVPVVAARAGGIPD------IIPPDQEGKTGFLYTPGD--VDDCVEKLETLLADPE 402 (465)
T ss_pred HHcCCCEEEcCCCCcHh------hhhcCCCCCceEEeCCCC--HHHHHHHHHHHHhCHH
Confidence 99999999987544333 3555 68899988765 5789999999997664
No 91
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism]
Probab=99.27 E-value=5.4e-15 Score=164.69 Aligned_cols=421 Identities=36% Similarity=0.420 Sum_probs=272.7
Q ss_pred EEEECCCchHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceeeecCCCCCCCCCCceeecC
Q 001947 121 LVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVP 200 (992)
Q Consensus 121 lVVsD~~~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp 200 (992)
-+..|..+..+.+...-++|.+.++|+.|.+.+..|.. ..+.+++...+.+....+ .++++.+..+.
T Consensus 64 pmaid~~~l~~~~~~~d~~~sl~~tN~~~~f~~~~~~~------p~~~~~I~~~~~~w~ny~----~C~~~g~h~~~--- 130 (489)
T KOG0631|consen 64 PMAIDVDTLIAVAPSDDGIVSLRLTNFNPDFIYFKYPL------PSIVWQIDPDVSKWENYF----YCGMKGFHEYI--- 130 (489)
T ss_pred eEEeeeeeEEEEEEcCCCceeEEEecCCCccceeeccC------CchhcccCCCccchhhhh----ccchHHHHHHH---
Confidence 33334333333344556899999999998866554422 124455655555443332 23333333221
Q ss_pred cccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCCC-CCCCeEEcCCCCCHHHHHhh
Q 001947 201 LVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ-LPPNFIKLPKDAYTPDFMAA 279 (992)
Q Consensus 201 ~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~~-l~~nv~v~~f~~~~p~lL~a 279 (992)
. +...+... ...+.++.+|+++.++.+-.. ..|.+.++|..... +++|+....-.-..+...++
T Consensus 131 --~------~~~~~~~~----~vGl~~l~~g~vPtgsgLsSs---aa~~c~a~lA~~~~~~gpn~~~~kkd~~~i~~~ae 195 (489)
T KOG0631|consen 131 --K------RKPVRFEP----PVGLSILNDGSVPTGSGLSSS---AAWLCAAALATLKLNLGPNFIISKKDLATITVVAE 195 (489)
T ss_pred --h------ccccccCC----CcceEEEecCCCCCCCCcchh---HHHHHHHHHHHHHHhcCCCcccchhhhhcceEEee
Confidence 0 00111111 145677888888775333221 12222222222111 35565443321122356678
Q ss_pred cCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCccCCCCH
Q 001947 280 SDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYEGGING 359 (992)
Q Consensus 280 aDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~~~~~G 359 (992)
.++.+..+|+.+..|+++...+.+.|. +. +.+.-+..++....|+.|...++....+.....+-.+.+ .+.+...+
T Consensus 196 ~~~G~~~gGmdq~asvl~~~~~Al~v~-~~--~~Pf~~~~lk~~~~~vfvI~~~L~~~nk~~~a~tnynlR-v~E~~ia~ 271 (489)
T KOG0631|consen 196 SYIGLNSGGMDQAASVLAEKGHALLVD-PY--FTPFRRSMLKLPDGGVFVIANSLVESNKAETAETNYNLR-VVEGTIAA 271 (489)
T ss_pred cccCcCCCcHHHHHHHHHhcCceEEec-cc--CCccccccccCCCCceEEEechhhhhcchhhhhhhhhce-eEeeehhh
Confidence 899999999999999999999999998 33 446778889999999999888876555555554444433 33344444
Q ss_pred HHHHHHHHHHHHccCccccCCCCccchhhHhhhhhhhhcccCCCcccccccccccccccccCCCCCCCCCCCCCCCcccc
Q 001947 360 GEVAAHILQETAIGKNYASDKLSGARRLRDAIIFGYELQRVPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVKFT 439 (992)
Q Consensus 360 ~~~aA~~I~~~~~~~~~~s~~~~g~~~Lr~a~~~~~~~q~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 439 (992)
..-++++..+.. ++.++|+.|++ ++. .+|.||..+++.+++-. -.+++
T Consensus 272 ~~la~k~~~~~~------------------~~~~~~~~~~~-~~~-~i~~~~~~~~~~l~~v~-~~~~~----------- 319 (489)
T KOG0631|consen 272 GELAAKILVELP------------------AYILRYQLQRA-WRG-DIGEGYERAEEMLGLVE-ESLKP----------- 319 (489)
T ss_pred HHHHHHhhcccH------------------HHHHhhhhhhc-ccc-ccchhHHHHHHHHHHHH-hhcCc-----------
Confidence 444444444321 77899999999 888 99999999999888432 12222
Q ss_pred ccceeecCCCCCCchHHHHHHHHhhccccccCCCCchHHHHHHHHHHhccCCCCCceEEEEcCccccccccccccCCCee
Q 001947 440 EDFEILHGDCQGLPDTMSFLKSLVELDIIKDSDRTPEKRQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLV 519 (992)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~v 519 (992)
|+|++++.|-+.+.|+..|++++..+....... ..-.+++++.....+|.|+.+..+.++|+|.+ |...||. .
T Consensus 320 e~f~~ee~~~~l~~~~~~f~~~~~T~~~v~~~~--~k~~~rakHv~sea~rv~q~~~~~~~a~~~~d--~~~~~~g---~ 392 (489)
T KOG0631|consen 320 EGFNIEEVARALGLDTEEFLQSLLTLAAVDLQV--KKLYQRAKHVYSEALRVLQEEKLCARAPGRAD--GFLADFG---R 392 (489)
T ss_pred CCCCHHHHHHHhccchHHHHHHhccccchhhHH--HHHHHHHHHHHHHHHHHHHHHHHHhcCccchh--hhHHHHH---H
Confidence 489999999999999999999999988775553 11235566777778888988999999999999 8888876 8
Q ss_pred eccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCceeccCCccc-cCCCCcchhhhhc
Q 001947 520 LQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFDMDLSDFM-DEGKPMSYEKAKK 598 (992)
Q Consensus 520 l~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~~~l~~l~-~~~~~~~~~~~~~ 598 (992)
|.+..-+.|.+....+-+....||+|.+++.... +.+...+.+....+..+ .+..+.+ ....++.|+|+..
T Consensus 393 LmneS~~Sc~~~yEcscpel~qL~kiala~g~~g-----aRlTGaGwGGc~v~lvp---~d~~~~~~~~~~~~~Y~ka~~ 464 (489)
T KOG0631|consen 393 LMNESHRSCDVLYECSCPELDQLCKIALANGGVG-----ARLTGAGWGGCTVALVP---ADLVDFAVAALKEIYYEKAYP 464 (489)
T ss_pred HhhhhhHHHHHHHhcCCHhHHHHHHHHHhcCCcc-----ceeeccccccceeeecc---ccchHHHHHhhhhhhhccccc
Confidence 8899999999999999888999999998765443 45555554432222222 1211111 1235788999988
Q ss_pred ccCCCCCCchHHHHHHHHHHHH
Q 001947 599 YFDTNPSQKWAAYVAGTILVLM 620 (992)
Q Consensus 599 ~~~~~~~~~w~nyv~~~i~~~~ 620 (992)
+|.+++...|.-+.++++-.++
T Consensus 465 ~~~~~~~k~~~~~skp~~g~~l 486 (489)
T KOG0631|consen 465 KFAQDELKKALIVSKPAAGVLL 486 (489)
T ss_pred hhhhchhhceEEEecCchhhhh
Confidence 8888877788877777665543
No 92
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.21 E-value=3e-09 Score=120.59 Aligned_cols=290 Identities=16% Similarity=0.106 Sum_probs=154.7
Q ss_pred cccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHHh
Q 001947 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (992)
Q Consensus 27 ~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (992)
.|+..+...++++|.++||+|++++........... ....++.. ..... ...... + ..
T Consensus 14 ~G~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~--~~~~~~-----------~-----~~ 71 (364)
T cd03814 14 NGVVRTLQRLVEHLRARGHEVLVIAPGPFRESEGPA--RVVPVPSV--PLPGY--PEIRLA-----------L-----PP 71 (364)
T ss_pred cceehHHHHHHHHHHHCCCEEEEEeCCchhhccCCC--Cceeeccc--ccCcc--cceEec-----------c-----cc
Confidence 689999999999999999999999875421111100 00111110 00000 000000 0 01
Q ss_pred HHHHHHHHHcCCCcEEEECCC----chHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHH-HHhhcccccee
Q 001947 107 LKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQ-IAEDYSHCEFL 181 (992)
Q Consensus 107 l~~~~~~L~~~kPDlVVsD~~----~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~y~~~d~l 181 (992)
.....+.+++.+||+|+.+.. ..+..+++..++|++..-+..|......+.. ......... ....+..++.+
T Consensus 72 ~~~~~~~~~~~~pdii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~d~i 148 (364)
T cd03814 72 RRRVRRLLDAFAPDVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGL---GPLSWLAWAYLRWFHNRADRV 148 (364)
T ss_pred hhhHHHHHHhcCCCEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhccc---chHhHhhHHHHHHHHHhCCEE
Confidence 122344568899999987642 2345566778999876532222211110000 000111011 11122333433
Q ss_pred eecCCCCC---C-CCCCc--eeecCccccc--CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHH---hhCC-C
Q 001947 182 IRLPGYCP---M-PAFRD--VIDVPLVVRR--LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP-S 246 (992)
Q Consensus 182 l~~~~~~~---~-p~~~~--v~~vp~~~~~--~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~---~l~~-~ 246 (992)
+....... . ..... +.+.|..... +.......++.++ ...+.++++.|+.... . .+++ .+.. +
T Consensus 149 ~~~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~ 226 (364)
T cd03814 149 LVPSPSLADELRARGFRRVRLWPRGVDTELFHPRRRDEALRARLG--PPDRPVLLYVGRLAPEKNLEALLDADLPLRRRP 226 (364)
T ss_pred EeCCHHHHHHHhccCCCceeecCCCccccccCcccccHHHHHHhC--CCCCeEEEEEeccccccCHHHHHHHHHHhhhcC
Confidence 32111000 0 00011 2222222111 1111223344444 2344567777876542 2 2333 2322 4
Q ss_pred CcEEEEeCCCCCC-----CCCCeEEcCCCC--CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHH
Q 001947 247 GWKCLVCGASDSQ-----LPPNFIKLPKDA--YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPF 315 (992)
Q Consensus 247 ~~~~Vv~G~~~~~-----l~~nv~v~~f~~--~~p~lL~aaDlvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~ 315 (992)
++.++++|..... ..+|+.+.++.+ .++++|+.||++|..+. .++++|||++|+|+|+.+....
T Consensus 227 ~~~l~i~G~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~----- 301 (364)
T cd03814 227 PVRLVIVGDGPARARLEARYPNVHFLGFLDGEELAAAYASADVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGP----- 301 (364)
T ss_pred CceEEEEeCCchHHHHhccCCcEEEEeccCHHHHHHHHHhCCEEEECcccccCCcHHHHHHHcCCCEEEcCCCCc-----
Confidence 6788888865432 467899988753 57789999999997653 3789999999999999875443
Q ss_pred HHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 316 LRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 316 NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
...+++.+.|..+...+ .+.|.++|.+++.++.
T Consensus 302 -~~~i~~~~~g~~~~~~~--~~~l~~~i~~l~~~~~ 334 (364)
T cd03814 302 -ADIVTDGENGLLVEPGD--AEAFAAALAALLADPE 334 (364)
T ss_pred -hhhhcCCcceEEcCCCC--HHHHHHHHHHHHcCHH
Confidence 34466778998887655 4678999999987653
No 93
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism]
Probab=99.20 E-value=2.4e-09 Score=111.77 Aligned_cols=164 Identities=21% Similarity=0.283 Sum_probs=115.6
Q ss_pred EEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCce
Q 001947 498 VARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTF 577 (992)
Q Consensus 498 ~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~ 577 (992)
.++|+|-+.++--.++-.|+- ++|++.+.+.++..++.+++ .+
T Consensus 4 ~a~A~g~~TIiNAiatG~G~A---fgidL~v~a~v~~~~~~~~~-----------------------------~~----- 46 (278)
T COG1685 4 RARAYGGGTIINAIATGKGSA---FGIDLKVEAEVRLSDEGKVR-----------------------------GE----- 46 (278)
T ss_pred eEEecCceeEeeehhcCccce---eeecceEEEEEEEcCccccc-----------------------------cC-----
Confidence 457888888887777776664 88998888888876533210 00
Q ss_pred eccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHH
Q 001947 578 DMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMS 657 (992)
Q Consensus 578 ~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~ 657 (992)
+ ..-.+.+..++..+.+++|.. .|+++.++|+||.++||.||+|++.|++.
T Consensus 47 --~-------------------------~~d~~li~~~~~~v~e~~g~~--~~~~v~v~SeiP~~~GLkSSSA~~nAlv~ 97 (278)
T COG1685 47 --P-------------------------EGDTRLIERCVERVREKYGIP--LGVEVEVESEIPVGSGLKSSSAASNALVK 97 (278)
T ss_pred --C-------------------------CCChHHHHHHHHHHHHHcCCC--cceEEEEecCCCcccCcchhHHHHHHHHH
Confidence 0 000334445667677778876 58999999999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHHhccccCCC-CCccc-hhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeCC
Q 001947 658 AIAAAHGLNIHPRDLALLCQKVENHIVGAP-CGVMD-QMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSG 732 (992)
Q Consensus 658 al~~~~~~~l~~~el~~la~~~E~~~~G~~-~G~~D-~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsg 732 (992)
|+..+.|.++++.+++++.-++-.. .|.. .|-.| ..++.+|| ..+.|.+..++......| ++..+|.-.+
T Consensus 98 A~~~~~g~~~~~~~i~~l~a~~S~~-aGvSvTGA~DDa~AS~~GG---~~iTDN~~m~Ilrr~~~~-~~~vlI~~p~ 169 (278)
T COG1685 98 AVLKALGEEIDDFEILRLGARASKE-AGVSVTGAFDDACASYLGG---IVITDNRKMRILRRLDLP-ELTVLILAPG 169 (278)
T ss_pred HHHHHcCCCCChhHHHHHHHHHHHh-cCceEeccchHHHHHHhCC---eEEecchhheehhccccC-CceEEEEecC
Confidence 9999999999999999998776654 2422 34444 55899999 456676665543333443 5555655333
No 94
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.20 E-value=2.7e-09 Score=122.28 Aligned_cols=131 Identities=14% Similarity=0.121 Sum_probs=91.6
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hC-CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCC
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL-PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAY 272 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~-~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~ 272 (992)
...++.++++.+++ +++++|..... ..+++. +. ..++.+++.|..... +.+++.+.++.++
T Consensus 185 ~~~~~~~~~~~~~~-~il~~g~l~~~K~~~~li~a~~~l~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~ 263 (371)
T cd04962 185 EALKRRLGAPEGEK-VLIHISNFRPVKRIDDVIRIFAKVRKEVPARLLLVGDGPERSPAERLARELGLQDDVLFLGKQDH 263 (371)
T ss_pred HHHHHhcCCCCCCe-EEEEecccccccCHHHHHHHHHHHHhcCCceEEEEcCCcCHHHHHHHHHHcCCCceEEEecCccc
Confidence 34556677665554 56677766542 233332 22 235778888865431 3567999999888
Q ss_pred HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhh
Q 001947 273 TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~ 348 (992)
++++|+.||++|..+ ...++.|||++|+|+|+.+.++. ++.+++...|..++..+ .+.+.+++.++++
T Consensus 264 ~~~~~~~~d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~------~e~i~~~~~G~~~~~~~--~~~l~~~i~~l~~ 335 (371)
T cd04962 264 VEELLSIADLFLLPSEKESFGLAALEAMACGVPVVASNAGGI------PEVVKHGETGFLVDVGD--VEAMAEYALSLLE 335 (371)
T ss_pred HHHHHHhcCEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCc------hhhhcCCCceEEcCCCC--HHHHHHHHHHHHh
Confidence 999999999999643 34699999999999999875443 33466667788887655 4788899999887
Q ss_pred CC
Q 001947 349 LK 350 (992)
Q Consensus 349 ~~ 350 (992)
++
T Consensus 336 ~~ 337 (371)
T cd04962 336 DD 337 (371)
T ss_pred CH
Confidence 54
No 95
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase. Alternate names: mevalonate diphosphate decarboxylase; pyrophosphomevalonate decarboxylase
Probab=99.16 E-value=3.5e-09 Score=117.35 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.+.+..++..+.+..+.. .+++|.+.++||.++|||||||..+|++.|++.+++.+++++++.+++.++|. ..|
T Consensus 66 ~~~v~~~l~~~~~~~~~~--~~v~I~~~n~iP~~aGLgSSAA~~aA~~~Al~~l~~l~l~~~eL~~lA~~gsG----sa~ 139 (305)
T TIGR01240 66 NEKTSNCLDDFRQLRKEQ--EKLHIVSQNNFPTAAGLASSASGLAALVSACAKLYQLPLDTSELSRIARKGSG----SAC 139 (305)
T ss_pred hHHHHHHHHHHHHhcCCC--CceEEEEecCCCCCCccchHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHhcC----Cee
Confidence 456666677655545543 58999999999999999999999999999999999999999999999998874 344
Q ss_pred CccchhhhhccCc
Q 001947 689 GVMDQMASACGEA 701 (992)
Q Consensus 689 G~~D~~~~~~Gg~ 701 (992)
+ |++||.
T Consensus 140 ~------s~~GG~ 146 (305)
T TIGR01240 140 R------SLFGGY 146 (305)
T ss_pred e------eeecCe
Confidence 3 889996
No 96
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism]
Probab=99.14 E-value=2.8e-09 Score=114.99 Aligned_cols=170 Identities=21% Similarity=0.252 Sum_probs=117.8
Q ss_pred EEEEcCcccccc----ccccc-cCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccC
Q 001947 497 FVARAPGRLDVM----GGIAD-YSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELS 571 (992)
Q Consensus 497 ~~~~APGRv~L~----GeH~d-y~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~ 571 (992)
+.+.||.||||+ |-..| ||.--.+-..|+.+=.+.++++++..+. +...
T Consensus 4 ~~~~apAKiNL~L~V~gkr~DGYHel~sl~~~id~~D~l~i~~~~~~~~~---------------------~~~~----- 57 (289)
T COG1947 4 TKFPAPAKINLFLHVTGKRADGYHELETLFQFIDLGDELTIRPRDDDGFI---------------------VLGT----- 57 (289)
T ss_pred eEeeccceEEEEEEecccCCCCceeeEEEEEEeccCCEEEEEECCCCCce---------------------EecC-----
Confidence 467899999975 66665 6666666667877777777777643211 1100
Q ss_pred CCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHH
Q 001947 572 NRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASV 651 (992)
Q Consensus 572 ~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~ 651 (992)
+ ... -|..+ |.++.+...+.+..+.. .|++|.|+.+||+++|||.=+|=
T Consensus 58 -----~---~~~-------------------lp~~~--NLv~rAa~ll~~~~~~~--~~v~I~l~K~IPv~aGLGGGSSd 106 (289)
T COG1947 58 -----F---ADG-------------------LPTDE--NLVYRAAELLRKRTGIA--GGVSIHLDKNIPVGAGLGGGSSD 106 (289)
T ss_pred -----C---CCC-------------------CCCcc--hHHHHHHHHHHHHhCCC--CCeeEEEEecCcccCcCccchHH
Confidence 0 001 11222 88888888777777743 68999999999999999988888
Q ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCCCeEEEEEeC
Q 001947 652 EVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDS 731 (992)
Q Consensus 652 ~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~ds 731 (992)
..+++.+|+++++..++.+||..++.++ |. |---+++||. .+...+. +..+.++-++...++++..
T Consensus 107 AAa~L~~Ln~lw~~~ls~~eL~~Lg~~L-----Ga-----DVPffl~g~t---A~a~G~G-E~l~~~~~~~~~~~vl~~P 172 (289)
T COG1947 107 AAAVLVALNELWGLGLSLEELAELGLRL-----GA-----DVPFFLSGGT---AFAEGRG-EKLEPLEDPPEKWYVLAKP 172 (289)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHh-----CC-----CcCeeeeCCc---eEEEEcc-ceeeECCCCCCceEEEEeC
Confidence 8899999999999999999999999863 33 6656777774 3333344 3335555335666777876
Q ss_pred CCcccc
Q 001947 732 GIRHSV 737 (992)
Q Consensus 732 gi~~~~ 737 (992)
++.-+|
T Consensus 173 ~v~vsT 178 (289)
T COG1947 173 GVGVST 178 (289)
T ss_pred CCCCCh
Confidence 665554
No 97
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.14 E-value=1.1e-08 Score=119.71 Aligned_cols=120 Identities=14% Similarity=0.181 Sum_probs=81.7
Q ss_pred CCCCcEEEEEcCCCCCh--h-hHHHh---hC--------CCCcEEEEeCCCCCC---------CC-CCeEEc-CCC--CC
Q 001947 220 EDDVKLLILNFGGQPAG--W-KLKEE---YL--------PSGWKCLVCGASDSQ---------LP-PNFIKL-PKD--AY 272 (992)
Q Consensus 220 ~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~--------~~~~~~Vv~G~~~~~---------l~-~nv~v~-~f~--~~ 272 (992)
.++++.++++.|..... . .++++ +. .+++.+++.|.+... +. +|+.++ +|. ++
T Consensus 228 ~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~i~l~ivG~G~~~~~l~~~~~~~~l~~~~~~~g~~~~~~ 307 (415)
T cd03816 228 SEERPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPKLLCIITGKGPLKEKYLERIKELKLKKVTIRTPWLSAED 307 (415)
T ss_pred cCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCCEEEEEEecCccHHHHHHHHHHcCCCcEEEEcCcCCHHH
Confidence 34556677777876652 2 23332 21 135788888865421 11 466654 565 46
Q ss_pred HHHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 001947 273 TPDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (992)
Q Consensus 273 ~p~lL~aaDlvIt----~~G---~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ 345 (992)
++++|++||++|. ..| .+++.|||+||+|+|+...++ ..+.+++.+.|+.+. +++.+.++|.+
T Consensus 308 ~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~------~~eiv~~~~~G~lv~----d~~~la~~i~~ 377 (415)
T cd03816 308 YPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKC------IDELVKHGENGLVFG----DSEELAEQLID 377 (415)
T ss_pred HHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCC------HHHHhcCCCCEEEEC----CHHHHHHHHHH
Confidence 7899999999984 222 458999999999999976432 345577778898883 36899999999
Q ss_pred HhhC
Q 001947 346 AISL 349 (992)
Q Consensus 346 ll~~ 349 (992)
++++
T Consensus 378 ll~~ 381 (415)
T cd03816 378 LLSN 381 (415)
T ss_pred HHhc
Confidence 9986
No 98
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.10 E-value=1e-08 Score=116.77 Aligned_cols=134 Identities=23% Similarity=0.220 Sum_probs=91.7
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCC--C-hh-hHHHh---hCC---CCcEEEEeCCCCCC----CCCCeEEcCCCC---
Q 001947 209 SRKEVRKELGIEDDVKLLILNFGGQP--A-GW-KLKEE---YLP---SGWKCLVCGASDSQ----LPPNFIKLPKDA--- 271 (992)
Q Consensus 209 ~r~e~r~~l~~~~d~~~Vlvs~Gg~~--~-~~-~ll~~---l~~---~~~~~Vv~G~~~~~----l~~nv~v~~f~~--- 271 (992)
.+...++.+++++++.++++...+.. . +. .+++. +.. .++.++++|..... +..++...++.+
T Consensus 177 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~~~~~i~G~~~~~~~~~~~~~v~~~g~~~~~~ 256 (365)
T cd03825 177 DKREARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDDIELVVFGASDPEIPPDLPFPVHYLGSLNDDE 256 (365)
T ss_pred cHHHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCCeEEEEeCCCchhhhccCCCceEecCCcCCHH
Confidence 34566777888777665554433332 1 22 23332 322 56678888876543 456788888886
Q ss_pred CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHh
Q 001947 272 YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll 347 (992)
.++.+|+.||++|..+ ..+++.|||++|+|+|+...++..|. +.+.+.|..++..+ .+.|.+++.+++
T Consensus 257 ~~~~~~~~ad~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~------~~~~~~g~~~~~~~--~~~~~~~l~~l~ 328 (365)
T cd03825 257 SLALIYSAADVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDI------VDHGVTGYLAKPGD--PEDLAEGIEWLL 328 (365)
T ss_pred HHHHHHHhCCEEEeccccccccHHHHHHHhcCCCEEEecCCCChhh------eeCCCceEEeCCCC--HHHHHHHHHHHH
Confidence 3568999999999854 34799999999999999876555443 44556787777554 578999999998
Q ss_pred hCC
Q 001947 348 SLK 350 (992)
Q Consensus 348 ~~~ 350 (992)
+++
T Consensus 329 ~~~ 331 (365)
T cd03825 329 ADP 331 (365)
T ss_pred hCH
Confidence 765
No 99
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.09 E-value=8.4e-09 Score=116.49 Aligned_cols=122 Identities=18% Similarity=0.066 Sum_probs=86.8
Q ss_pred CCcEEEEEcCCCCCh--h-hHHHh---hCCCCcEEEEeCCCCCC--------CCCCeEEcCCC--CCHHHHHhhcCEEEe
Q 001947 222 DVKLLILNFGGQPAG--W-KLKEE---YLPSGWKCLVCGASDSQ--------LPPNFIKLPKD--AYTPDFMAASDCMLG 285 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~--~-~ll~~---l~~~~~~~Vv~G~~~~~--------l~~nv~v~~f~--~~~p~lL~aaDlvIt 285 (992)
+.+.++++.|+.... . .+++. +...++.++++|..... ...++.+.++. +.+.++|+.||++|.
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i~G~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~i~ 268 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVIVGNGLELEEESYELEGDPRVEFLGAYPQEEIDDFYAEIDVLVV 268 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEEEcCchhhhHHHHhhcCCCeEEEeCCCCHHHHHHHHHhCCEEEE
Confidence 445667777876552 2 23332 32246788888876542 24789999987 456789999999995
Q ss_pred c-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 286 K-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 286 ~-----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
. +...++.|||++|+|+|+.+.++ +.+.+.+.+.|..+...+ .+.|.+++.++++++.
T Consensus 269 ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~------~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~~ 331 (359)
T cd03823 269 PSIWPENFPLVIREALAAGVPVIASDIGG------MAELVRDGVNGLLFPPGD--AEDLAAALERLIDDPD 331 (359)
T ss_pred cCcccCCCChHHHHHHHCCCCEEECCCCC------HHHHhcCCCcEEEECCCC--HHHHHHHHHHHHhChH
Confidence 3 23358999999999999976432 345577777898888766 5789999999998653
No 100
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.07 E-value=3.2e-08 Score=112.12 Aligned_cols=296 Identities=21% Similarity=0.204 Sum_probs=157.0
Q ss_pred CCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccH
Q 001947 24 GHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPR 103 (992)
Q Consensus 24 g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (992)
....|+..++..++++|.++||+|++++............ ..+... .. . . . ........+ .
T Consensus 11 p~~~G~~~~~~~l~~~L~~~g~~v~v~~~~~~~~~~~~~~---~~~~~~--~~--~-----~-~---~~~~~~~~~--~- 71 (374)
T cd03817 11 PQVNGVATSIRRLAEELEKRGHEVYVVAPSYPGAPEEEEV---VVVRPF--RV--P-----T-F---KYPDFRLPL--P- 71 (374)
T ss_pred CCCCCeehHHHHHHHHHHHcCCeEEEEeCCCCCCCccccc---cccccc--cc--c-----c-c---hhhhhhccc--c-
Confidence 3456999999999999999999999987653211111000 000000 00 0 0 0 000000000 0
Q ss_pred HHhHHHHHHHHHcCCCcEEEECCCc----hHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHH--HHHhhccc
Q 001947 104 KSILKDEVEWLNSIKADLVVSDVVP----VACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVW--QIAEDYSH 177 (992)
Q Consensus 104 ~~~l~~~~~~L~~~kPDlVVsD~~~----~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~--~l~~~y~~ 177 (992)
........+++.+||+|+.+.+. .+..+++..++|++...+..+. .+..+............. .....+..
T Consensus 72 --~~~~~~~~~~~~~~Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (374)
T cd03817 72 --IPRALIIILKELGPDIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYE-DYTHYVPLGRLLARAVVRRKLSRRFYNR 148 (374)
T ss_pred --HHHHHHHHHhhcCCCEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHH-HHHHHHhcccchhHHHHHHHHHHHHhhh
Confidence 11223445788999999987532 2344567789998775332222 111111110000001111 11122334
Q ss_pred cceeeecCCCC-----CCCCCCceeecC--ccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---h
Q 001947 178 CEFLIRLPGYC-----PMPAFRDVIDVP--LVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---Y 243 (992)
Q Consensus 178 ~d~ll~~~~~~-----~~p~~~~v~~vp--~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l 243 (992)
++.++...... .......+..+| ..... ....+...++.++.+.+ +.+++..|+.... . .+++. +
T Consensus 149 ~d~i~~~s~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~G~~~~~k~~~~l~~~~~~~ 227 (374)
T cd03817 149 CDAVIAPSEKIADLLREYGVKRPIEVIPTGIDLDRFEPVDGDDERRKLGIPED-EPVLLYVGRLAKEKNIDFLIRAFARL 227 (374)
T ss_pred CCEEEeccHHHHHHHHhcCCCCceEEcCCccchhccCccchhHHHHhcCCCCC-CeEEEEEeeeecccCHHHHHHHHHHH
Confidence 44444321110 000001122222 21111 11122333455555444 4566777776542 1 23332 2
Q ss_pred CC--CCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEE
Q 001947 244 LP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVF 304 (992)
Q Consensus 244 ~~--~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~ 304 (992)
.. .++.++++|..... +.+++.+.++++ .++++|..||++|..+ ..+++.|||++|+|+|+
T Consensus 228 ~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~g~PvI~ 307 (374)
T cd03817 228 LKEEPDVKLVIVGDGPEREELEELARELGLADRVIFTGFVPREELPDYYKAADLFVFASTTETQGLVLLEAMAAGLPVVA 307 (374)
T ss_pred HHhCCCeEEEEEeCCchHHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHcCEEEecccccCcChHHHHHHHcCCcEEE
Confidence 22 56778888865421 357899998874 5678999999999644 34689999999999999
Q ss_pred EeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 305 iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
.+.+.. +..+++.+.|..++..+. .+.+++.++++++.
T Consensus 308 ~~~~~~------~~~i~~~~~g~~~~~~~~---~~~~~i~~l~~~~~ 345 (374)
T cd03817 308 VDAPGL------PDLVADGENGFLFPPGDE---ALAEALLRLLQDPE 345 (374)
T ss_pred eCCCCh------hhheecCceeEEeCCCCH---HHHHHHHHHHhChH
Confidence 875433 344667788888876542 78999999998664
No 101
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2.7.1.39 from EC), galactokinases (2.7.1.6 from EC) and mevalonate kinases (2.7.1.36 from EC). These kinases make up the GHMP kinase superfamily of ATP-dependent enzymes []. These enzymes are involved in the biosynthesis of isoprenes and amino acids as well as in carbohydrate metabolism. The C-terminal domain of homoserine kinase has a central alpha-beta plait fold and an insertion of four helices, which, together with the N-terminal fold, create a novel nucleotide binding fold [].; PDB: 2R3V_C 4EMD_A 4DXL_A 4ED4_A 2GS8_A 1K47_E 3GON_A 3K17_B 1PIE_A 2AJ4_A ....
Probab=99.07 E-value=1.9e-10 Score=103.10 Aligned_cols=82 Identities=22% Similarity=0.345 Sum_probs=67.7
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhh--hhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEE
Q 001947 860 FKALLTAAASDDQLTSLGELLYQCHYS--YSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVI 937 (992)
Q Consensus 860 ~~~~l~~~~~~~d~~~lG~lm~~sH~s--lr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l 937 (992)
++++|.++ |++.|+++|+++|.+ ....++.+|+++.+++.+++ .|++|++|||+||||||++|
T Consensus 1 m~~al~~~----d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~Ga~~~~~sGsG~G~~v~~l 65 (85)
T PF08544_consen 1 MIKALAEG----DLELLGELMNENQENEPENYREVLTPEIDELKEAAEE-----------NGALGAKMSGSGGGPTVFAL 65 (85)
T ss_dssp HHHHHHTT----CHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH-----------TTESEEEEETTSSSSEEEEE
T ss_pred CHHHHHCc----CHHHHHHHHHHhhhhcchHHHHHcCHHHHHHHHHHHH-----------CCCCceecCCCCCCCeEEEE
Confidence 35677775 999999999999885 33457789999999999987 68999999999999999988
Q ss_pred ccCCcccHHHHHHHHHHHH
Q 001947 938 GRNSLRSSEQVLEIQQRYK 956 (992)
Q Consensus 938 ~~~~~~~~~~~~~i~~~y~ 956 (992)
.++..+++++.+++++.|+
T Consensus 66 ~~~~~~~~~v~~~l~~~~~ 84 (85)
T PF08544_consen 66 CKDEDDAERVAEALREHYK 84 (85)
T ss_dssp ESSHHHHHHHHHHHHHHTH
T ss_pred ECCHHHHHHHHHHHHHhCC
Confidence 8554455678888877775
No 102
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.07 E-value=2.9e-08 Score=112.91 Aligned_cols=129 Identities=20% Similarity=0.235 Sum_probs=88.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hCC--CCcEEEEeCCCCCC-----------CCCCeEEcCCCC
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA 271 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~~--~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~ 271 (992)
..+++.++++++++ ++++.|+.... ..+++. +.. +++.+++.|..... +.+|+.+.++.+
T Consensus 176 ~~~~~~~~~~~~~~-~~l~~g~~~~~kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~ 254 (360)
T cd04951 176 LKIRNALGVKNDTF-VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKLLIAGDGPLRATLERLIKALGLSNRVKLLGLRD 254 (360)
T ss_pred HHHHHHcCcCCCCE-EEEEEeeCchhcCcHHHHHHHHHHHhhCCCeEEEEEcCCCcHHHHHHHHHhcCCCCcEEEecccc
Confidence 35667777765554 56666765442 233332 222 46788888865421 356899999988
Q ss_pred CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHh
Q 001947 272 YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll 347 (992)
+++++|+.||++|..+. .+++.|||++|+|+|+.+.+.. .+.+++ .|..+...+ .+.+.+++.+++
T Consensus 255 ~~~~~~~~ad~~v~~s~~e~~~~~~~Ea~a~G~PvI~~~~~~~------~e~i~~--~g~~~~~~~--~~~~~~~i~~ll 324 (360)
T cd04951 255 DIAAYYNAADLFVLSSAWEGFGLVVAEAMACELPVVATDAGGV------REVVGD--SGLIVPISD--PEALANKIDEIL 324 (360)
T ss_pred cHHHHHHhhceEEecccccCCChHHHHHHHcCCCEEEecCCCh------hhEecC--CceEeCCCC--HHHHHHHHHHHH
Confidence 99999999999998653 5789999999999999764433 333554 455565544 578999999998
Q ss_pred hCC
Q 001947 348 SLK 350 (992)
Q Consensus 348 ~~~ 350 (992)
+++
T Consensus 325 ~~~ 327 (360)
T cd04951 325 KMS 327 (360)
T ss_pred hCC
Confidence 543
No 103
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.06 E-value=3.9e-08 Score=109.95 Aligned_cols=120 Identities=18% Similarity=0.155 Sum_probs=83.9
Q ss_pred CcEEEEEcCCCCCh--h-hHHH---hhC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEE
Q 001947 223 VKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~---~l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlv 283 (992)
.+.++++.|+.... . .+++ .+. .+++.++++|..... +..++.+.++.+.++++|..||++
T Consensus 177 ~~~~i~~~g~~~~~K~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~ 256 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDLLIEAWAKIAKKHPDWKLRIVGDGPEREALEALIKELGLEDRVILLGFTKNIEEYYAKASIF 256 (348)
T ss_pred CCcEEEEEEeeccccCHHHHHHHHHHHHhcCCCeEEEEEeCCCCHHHHHHHHHHcCCCCeEEEcCCcchHHHHHHhCCEE
Confidence 34456677765542 1 2333 232 356788888865431 356788888877889999999999
Q ss_pred EecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcC-cEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 284 LGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 284 It~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G-~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
|..+. .+++.|||++|+|+|+.+.....++ +...+ .|..++..+ .+.+.++|.++++++
T Consensus 257 i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~------~~~~~~~g~~~~~~~--~~~~~~~i~~ll~~~ 320 (348)
T cd03820 257 VLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSE------IIEDGVNGLLVPNGD--VEALAEALLRLMEDE 320 (348)
T ss_pred EeCccccccCHHHHHHHHcCCCEEEecCCCchHh------hhccCcceEEeCCCC--HHHHHHHHHHHHcCH
Confidence 97652 4689999999999999874433332 44444 888887655 478999999998765
No 104
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.05 E-value=4.9e-08 Score=111.01 Aligned_cols=122 Identities=18% Similarity=0.105 Sum_probs=84.3
Q ss_pred CCcEEEEEcCCCCCh---hhHHH---hhCC-CCcEEEEeCCCCCC----------CCCCeEEcCCCC--CHHHHHhhcCE
Q 001947 222 DVKLLILNFGGQPAG---WKLKE---EYLP-SGWKCLVCGASDSQ----------LPPNFIKLPKDA--YTPDFMAASDC 282 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~---~~ll~---~l~~-~~~~~Vv~G~~~~~----------l~~nv~v~~f~~--~~p~lL~aaDl 282 (992)
+.+.++++.|+.... ..+++ .+.. +++.++++|..... ..+|+.+.++.+ .+.++|..||+
T Consensus 218 ~~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di 297 (394)
T cd03794 218 DDKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLIVGDGPEKEELKELAKALGLDNVTFLGRVPKEELPELLAAADV 297 (394)
T ss_pred CCcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEEeCCcccHHHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhhCe
Confidence 445677788876653 22333 2322 36788888865431 246899888764 56689999999
Q ss_pred EEecCC---------hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 283 MLGKIG---------YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 283 vIt~~G---------~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
+|.... .+++.||+++|+|+|+.+.+...|. +...+.|..++..+ .+.+.++|.++++++.
T Consensus 298 ~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~------~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~ 367 (394)
T cd03794 298 GLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL------VEEAGAGLVVPPGD--PEALAAAILELLDDPE 367 (394)
T ss_pred eEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh------hccCCcceEeCCCC--HHHHHHHHHHHHhChH
Confidence 996432 3457999999999999986654433 44557888887654 5789999999986653
No 105
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.05 E-value=2.5e-08 Score=114.92 Aligned_cols=294 Identities=16% Similarity=0.112 Sum_probs=156.1
Q ss_pred EEEEEeccCCCcccH-HHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHH
Q 001947 16 LVFAYYVTGHGFGHA-TRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEK 94 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv-~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 94 (992)
.+|++.+.+.+.|.+ .-.+.|+++|.+.||++++++......+...+....+.+... . . . ... .
T Consensus 2 ~~il~ii~~~~~GG~e~~~~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~----~--~-~--~~~------~ 66 (374)
T TIGR03088 2 PLIVHVVYRFDVGGLENGLVNLINHLPADRYRHAVVALTEVSAFRKRIQRPDVAFYAL----H--K-Q--PGK------D 66 (374)
T ss_pred ceEEEEeCCCCCCcHHHHHHHHHhhccccccceEEEEcCCCChhHHHHHhcCceEEEe----C--C-C--CCC------C
Confidence 467777777775655 556699999999999998886433212221111111122111 0 0 0 000 0
Q ss_pred HHHHhhccHHHhHHHHHHHHHcCCCcEEEECCC--chHHHHHHHcCCcEEEEecCchhHH-HH-HHHhhhccchHHHHHH
Q 001947 95 YSETAVAPRKSILKDEVEWLNSIKADLVVSDVV--PVACRAAADAGIRSVCVTNFSWDFI-YA-EYVMAAGHHHRSIVWQ 170 (992)
Q Consensus 95 ~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~--~~a~~aA~~~gIP~v~is~~~~~~~-~~-~~~~~~~~~~~~i~~~ 170 (992)
+. ......+++++.+||+|++... .++..+++..++|...++...|... .. .... ... ...
T Consensus 67 ~~---------~~~~l~~~l~~~~~Divh~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~-----~~~-~~~ 131 (374)
T TIGR03088 67 VA---------VYPQLYRLLRQLRPDIVHTRNLAALEAQLPAALAGVPARIHGEHGRDVFDLDGSNWK-----YRW-LRR 131 (374)
T ss_pred hH---------HHHHHHHHHHHhCCCEEEEcchhHHHHHHHHHhcCCCeEEEeecCcccccchhhHHH-----HHH-HHH
Confidence 00 1233456788999999998752 2334566778899755443222100 00 0000 000 000
Q ss_pred HHhhccccceeeecCCC--------CCCC-CCCceeecCcccccCCC---ChHHHHHHhCCCCCCcEEEEEcCCCCCh--
Q 001947 171 IAEDYSHCEFLIRLPGY--------CPMP-AFRDVIDVPLVVRRLHK---SRKEVRKELGIEDDVKLLILNFGGQPAG-- 236 (992)
Q Consensus 171 l~~~y~~~d~ll~~~~~--------~~~p-~~~~v~~vp~~~~~~~~---~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-- 236 (992)
+.. ..++.++..... ...+ ....+.+.|+....... .+...++.... .+.++++++.|.....
T Consensus 132 ~~~--~~~~~~i~vs~~~~~~~~~~~~~~~~~~~vi~ngvd~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~vGrl~~~Kg 208 (374)
T TIGR03088 132 LYR--PLIHHYVAVSRDLEDWLRGPVKVPPAKIHQIYNGVDTERFHPSRGDRSPILPPDFF-ADESVVVGTVGRLQAVKD 208 (374)
T ss_pred HHH--hcCCeEEEeCHHHHHHHHHhcCCChhhEEEeccCccccccCCCccchhhhhHhhcC-CCCCeEEEEEecCCcccC
Confidence 000 001111111000 0001 11123333332221111 11122222222 3455678888877652
Q ss_pred -hhHHHh---hC---C---CCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEEEec----CChhH
Q 001947 237 -WKLKEE---YL---P---SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGK----IGYGT 291 (992)
Q Consensus 237 -~~ll~~---l~---~---~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlvIt~----~G~~T 291 (992)
..++++ +. + +++.+++.|.+... +..++.+.++..+++++|+.||++|.. +-.++
T Consensus 209 ~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~adi~v~pS~~Eg~~~~ 288 (374)
T TIGR03088 209 QPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMVRAAGLAHLVWLPGERDDVPALMQALDLFVLPSLAEGISNT 288 (374)
T ss_pred HHHHHHHHHHHHHhCcccccceEEEEecCCchHHHHHHHHHHcCCcceEEEcCCcCCHHHHHHhcCEEEeccccccCchH
Confidence 123332 21 1 25788888865421 345677888888899999999999964 23469
Q ss_pred HHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 292 v~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+.|||++|+|+|+.+.++. .+.+++...|..++..+ ++.|.++|.++++++
T Consensus 289 ~lEAma~G~Pvv~s~~~g~------~e~i~~~~~g~~~~~~d--~~~la~~i~~l~~~~ 339 (374)
T TIGR03088 289 ILEAMASGLPVIATAVGGN------PELVQHGVTGALVPPGD--AVALARALQPYVSDP 339 (374)
T ss_pred HHHHHHcCCCEEEcCCCCc------HHHhcCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 9999999999999875443 33466666788887655 578999999988754
No 106
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism]
Probab=99.05 E-value=2.5e-09 Score=109.85 Aligned_cols=242 Identities=16% Similarity=0.189 Sum_probs=149.8
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEe
Q 001947 629 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 708 (992)
Q Consensus 629 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~ 708 (992)
.+-++.+.+.||.|+|+|||++..++.+...++..++.+++......+..+|+|..+. ++..+||+--.++.+
T Consensus 93 ~~Tk~hvtNPiplgrGigssgta~~aGv~l~ne~a~LGlsk~~mldy~lmierhpdn~-------~a~mmGgf~GSflr~ 165 (355)
T KOG1537|consen 93 ITTKKHVTNPIPLGRGIGSSGTAKMAGVRLVNESADLGLSKGSMLDYSLMIERHPDNA-------VAEMMGGFLGSFLRA 165 (355)
T ss_pred cceeeeecCCccccccccchhhhhhhhheecchHhhcCCccccchhHHHHHhhChHHH-------HHHHHhhHHHHHHHH
Confidence 4568899999999999999999999999999999999999999999999899884332 245556542111111
Q ss_pred ecCccc--e-----eeecCCCCeEEEEEeCCCccccCCC-CCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcc
Q 001947 709 CQPAEL--L-----GVVEIPSHIRFWGIDSGIRHSVGGA-DYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPE 780 (992)
Q Consensus 709 ~~~~~~--~-----~~v~~p~~~~~vl~dsgi~~~~~~~-~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~ 780 (992)
-.+.+. . ..++-+.+ -|+++-+--|-+.+.. .|- +-+-++.++ +.- ++
T Consensus 166 l~e~E~~~~~~~ad~ilp~~~g-g~~li~~lpP~dlg~~~r~p--------w~~~lk~i~---viP--------~F---- 221 (355)
T KOG1537|consen 166 LLESEAKVSGYHADNILPAIMG-GFVLIRNLPPLDLGKPLRFP--------WDKDLKFIL---VIP--------DF---- 221 (355)
T ss_pred hCHhhhhhcCCCHHHhcccccC-CeeeecCCCcccccccccCC--------CCccceEEE---Eec--------cc----
Confidence 001010 0 00011111 1333322222222110 000 000000000 000 00
Q ss_pred hhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHH
Q 001947 781 VDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAF 860 (992)
Q Consensus 781 ~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~ 860 (992)
+++...+. ..||..+ ...|.|.+.+|....
T Consensus 222 -----------------el~T~k~R----~vLPt~y-----------------------------p~~d~V~NlqrlA~L 251 (355)
T KOG1537|consen 222 -----------------ELPTKKMR----AVLPTEY-----------------------------PMVDHVWNLQRLAAL 251 (355)
T ss_pred -----------------cccchhhh----hhcCccc-----------------------------cceeeeecHHHHHHH
Confidence 01111111 3455432 356788888998888
Q ss_pred HHHHhccCChhHHHHHHHHHHH-hhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEcc
Q 001947 861 KALLTAAASDDQLTSLGELLYQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGR 939 (992)
Q Consensus 861 ~~~l~~~~~~~d~~~lG~lm~~-sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~ 939 (992)
..||..++ .+....-.+|.+ -|+.||+- ..|+++.+...+... ..+|++|.-++||| .|+.++..
T Consensus 252 ttAl~~~p--~n~~L~y~~m~DkvhqPyRa~--LIPGl~~il~~~~p~--------t~pGl~GiclSGAG--PT~lAlat 317 (355)
T KOG1537|consen 252 TTALLEGP--DNVMLGYALMSDKVHQPYRAP--LIPGLEAILKAALPA--------TYPGLFGICLSGAG--PTALALAT 317 (355)
T ss_pred HHHHhcCC--CchhhhhhhhhccccCccccc--cCccHHHHHHhhCcc--------cCCceeeEEecCCC--CeeEEEec
Confidence 88876652 234455567776 59999996 689999998877652 23699999999999 99999988
Q ss_pred CCcccHHHHHHHHHHHHhhcCCCCeEEee
Q 001947 940 NSLRSSEQVLEIQQRYKDATGYLPLIIEG 968 (992)
Q Consensus 940 ~~~~~~~~~~~i~~~y~~~~g~~~~~~~~ 968 (992)
++. +++.++|.++|. +.|++..+-..
T Consensus 318 enf--~eI~~~mv~~F~-K~G~kcs~~~l 343 (355)
T KOG1537|consen 318 ENF--QEIGEKMVEAFW-KVGHKCSVASL 343 (355)
T ss_pred CcH--HHHHHHHHHHHH-hhCceeeeEee
Confidence 777 589999999997 77888766554
No 107
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.04 E-value=7.9e-08 Score=107.92 Aligned_cols=121 Identities=17% Similarity=0.081 Sum_probs=87.1
Q ss_pred CCcEEEEEcCCCCCh--h-hHHH---hhC--CCCcEEEEeCCCCCC------------CCCCeEEcCCCCCHHHHHhhcC
Q 001947 222 DVKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ------------LPPNFIKLPKDAYTPDFMAASD 281 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~--~-~ll~---~l~--~~~~~~Vv~G~~~~~------------l~~nv~v~~f~~~~p~lL~aaD 281 (992)
+.+.++++.|+.... . .+++ .+. .+++.++++|..... ...++++.++.+.+.++|..||
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 265 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLVGDGDEENPAAILEIEKLGLEGRVEFLGFRDDVPELLAAAD 265 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEEEcCCCcchhhHHHHHHhcCCcceEEEeeccccHHHHHHhcc
Confidence 345677788876542 2 2333 232 356788888875432 2357888888888899999999
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 282 CMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 282 lvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++|..+. .+++.||+++|+|+|+.+.+... ..+++.+.|..++..+ ++.|.++|.+++.++
T Consensus 266 i~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~~~------~~i~~~~~g~~~~~~~--~~~~~~~i~~l~~~~ 330 (359)
T cd03808 266 VFVLPSYREGLPRVLLEAMAMGRPVIATDVPGCR------EAVIDGVNGFLVPPGD--AEALADAIERLIEDP 330 (359)
T ss_pred EEEecCcccCcchHHHHHHHcCCCEEEecCCCch------hhhhcCcceEEECCCC--HHHHHHHHHHHHhCH
Confidence 9997553 46899999999999998755443 3466678888887655 578999999988765
No 108
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=99.03 E-value=8.1e-08 Score=107.62 Aligned_cols=309 Identities=17% Similarity=0.147 Sum_probs=165.1
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (992)
|+|.+-+..+ -|+.-...++++|.++||+|.+.+..... ..+.+..-++.+..+ |-. ... ...++
T Consensus 1 MkIwiDi~~p--~hvhfFk~~I~eL~~~GheV~it~R~~~~-~~~LL~~yg~~y~~i----G~~-----g~~---~~~Kl 65 (335)
T PF04007_consen 1 MKIWIDITHP--AHVHFFKNIIRELEKRGHEVLITARDKDE-TEELLDLYGIDYIVI----GKH-----GDS---LYGKL 65 (335)
T ss_pred CeEEEECCCc--hHHHHHHHHHHHHHhCCCEEEEEEeccch-HHHHHHHcCCCeEEE----cCC-----CCC---HHHHH
Confidence 4565566544 49999999999999999999998765321 111121112223222 111 001 11222
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhc
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDY 175 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y 175 (992)
... .....++.+++++++||++|+-..+.+..+|..+|+|+|.+.|..+..... ++ .+
T Consensus 66 ~~~-----~~R~~~l~~~~~~~~pDv~is~~s~~a~~va~~lgiP~I~f~D~e~a~~~~---------------~L--t~ 123 (335)
T PF04007_consen 66 LES-----IERQYKLLKLIKKFKPDVAISFGSPEAARVAFGLGIPSIVFNDTEHAIAQN---------------RL--TL 123 (335)
T ss_pred HHH-----HHHHHHHHHHHHhhCCCEEEecCcHHHHHHHHHhCCCeEEEecCchhhccc---------------ee--eh
Confidence 221 113445677888999999999999999999999999999996643210000 00 00
Q ss_pred cccceeeecCCCCCCC---CC---CceeecCcccc----cCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh---------
Q 001947 176 SHCEFLIRLPGYCPMP---AF---RDVIDVPLVVR----RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--------- 236 (992)
Q Consensus 176 ~~~d~ll~~~~~~~~p---~~---~~v~~vp~~~~----~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--------- 236 (992)
.-++.++ .|...+.. .+ .+++..+.... .+-.+.+++.+.+|++ +.+.|++=+-...+.
T Consensus 124 Pla~~i~-~P~~~~~~~~~~~G~~~~i~~y~G~~E~ayl~~F~Pd~~vl~~lg~~-~~~yIvvR~~~~~A~y~~~~~~i~ 201 (335)
T PF04007_consen 124 PLADVII-TPEAIPKEFLKRFGAKNQIRTYNGYKELAYLHPFKPDPEVLKELGLD-DEPYIVVRPEAWKASYDNGKKSIL 201 (335)
T ss_pred hcCCeeE-CCcccCHHHHHhcCCcCCEEEECCeeeEEeecCCCCChhHHHHcCCC-CCCEEEEEeccccCeeecCccchH
Confidence 0011111 11111000 00 01221111111 1111224677889976 568888876654442
Q ss_pred hhHHHhhCCCCcEEEEeCCCCCC--CCC--CeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCC
Q 001947 237 WKLKEEYLPSGWKCLVCGASDSQ--LPP--NFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNE 312 (992)
Q Consensus 237 ~~ll~~l~~~~~~~Vv~G~~~~~--l~~--nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~E 312 (992)
.++++.|...+..+|+.....++ +.+ ++.+.+-.-+..++|..||++||-|| +...||+.+|+|.|-+- ++ +
T Consensus 202 ~~ii~~L~~~~~~vV~ipr~~~~~~~~~~~~~~i~~~~vd~~~Ll~~a~l~Ig~gg-TMa~EAA~LGtPaIs~~-~g--~ 277 (335)
T PF04007_consen 202 PEIIEELEKYGRNVVIIPRYEDQRELFEKYGVIIPPEPVDGLDLLYYADLVIGGGG-TMAREAALLGTPAISCF-PG--K 277 (335)
T ss_pred HHHHHHHHhhCceEEEecCCcchhhHHhccCccccCCCCCHHHHHHhcCEEEeCCc-HHHHHHHHhCCCEEEec-CC--c
Confidence 13344454444333333222222 211 23333222233489999999999555 78899999999999863 22 2
Q ss_pred hHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc--CCCCHHHHHHHHHHHHH
Q 001947 313 EPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE--GGINGGEVAAHILQETA 371 (992)
Q Consensus 313 Q~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~--~~~~G~~~aA~~I~~~~ 371 (992)
....=+++.+.|.-... .+ ++++...+.+.+..+.... ...|-.+.+.+.|++.+
T Consensus 278 ~~~vd~~L~~~Gll~~~--~~--~~ei~~~v~~~~~~~~~~~~~~~~d~~~~i~~~i~~~~ 334 (335)
T PF04007_consen 278 LLAVDKYLIEKGLLYHS--TD--PDEIVEYVRKNLGKRKKIREKKSEDPTDLIIEEIEEYI 334 (335)
T ss_pred chhHHHHHHHCCCeEec--CC--HHHHHHHHHHhhhcccchhhhhccCHHHHHHHHHHHhh
Confidence 22444678888873332 33 3555566666554332221 23666666777766653
No 109
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=98.99 E-value=8.5e-08 Score=109.03 Aligned_cols=278 Identities=17% Similarity=0.098 Sum_probs=149.1
Q ss_pred cccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHHh
Q 001947 27 FGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSI 106 (992)
Q Consensus 27 ~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (992)
.|--..+..++++|.++||+|++++..... ...+....+.+... ... ....... +. .
T Consensus 10 gG~e~~~~~l~~~L~~~g~~v~v~~~~~~~--~~~~~~~~~~~~~~----~~~-----~~~~~~~---~~---------~ 66 (355)
T cd03819 10 GGVERGTLELARALVERGHRSLVASAGGRL--VAELEAEGSRHIKL----PFI-----SKNPLRI---LL---------N 66 (355)
T ss_pred CcHHHHHHHHHHHHHHcCCEEEEEcCCCch--HHHHHhcCCeEEEc----ccc-----ccchhhh---HH---------H
Confidence 466677779999999999999998754311 11111111111111 000 0000000 00 1
Q ss_pred HHHHHHHHHcCCCcEEEECCC---chHHHHHHHcCCcEEEEecCchh-H-HHHHHHhhhcc---chHHHHHHHHhhcccc
Q 001947 107 LKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVTNFSWD-F-IYAEYVMAAGH---HHRSIVWQIAEDYSHC 178 (992)
Q Consensus 107 l~~~~~~L~~~kPDlVVsD~~---~~a~~aA~~~gIP~v~is~~~~~-~-~~~~~~~~~~~---~~~~i~~~l~~~y~~~ 178 (992)
.....+++++.+||+|+.+.. ..+.++++..++|++...+-.+. . .+......... ......+.+...+...
T Consensus 67 ~~~l~~~~~~~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~vi~~s~~~~~~~~~~~~~~ 146 (355)
T cd03819 67 VARLRRLIREEKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNFRYNAIMARGDRVIAVSNFIADHIRENYGVD 146 (355)
T ss_pred HHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHHHHHHHHHhcCEEEEeCHHHHHHHHHhcCCC
Confidence 233456678899999998752 23445567789999875332221 1 11111000000 0011111111111100
Q ss_pred ceeeecCCCCCCCCCCceeecCccccc---CCCChH---HHHHHhCCCCCCcEEEEEcCCCCCh---hhHHH---hhCC-
Q 001947 179 EFLIRLPGYCPMPAFRDVIDVPLVVRR---LHKSRK---EVRKELGIEDDVKLLILNFGGQPAG---WKLKE---EYLP- 245 (992)
Q Consensus 179 d~ll~~~~~~~~p~~~~v~~vp~~~~~---~~~~r~---e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~---~l~~- 245 (992)
+....+.+.|+.... ....+. .+++.++.+++. .++++.|+.... ..+++ .+..
T Consensus 147 ------------~~k~~~i~ngi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~Gr~~~~Kg~~~li~~~~~l~~~ 213 (355)
T cd03819 147 ------------PDRIRVIPRGVDLDRFDPGAVPPERILALAREWPLPKGK-PVILLPGRLTRWKGQEVFIEALARLKKD 213 (355)
T ss_pred ------------hhhEEEecCCccccccCccccchHHHHHHHHHcCCCCCc-eEEEEeeccccccCHHHHHHHHHHHHhc
Confidence 000112222221111 011111 245666655444 566777776542 12333 2322
Q ss_pred -CCcEEEEeCCCCCC---------------CCCCeEEcCCCCCHHHHHhhcCEEEecC-----ChhHHHHHHHcCCcEEE
Q 001947 246 -SGWKCLVCGASDSQ---------------LPPNFIKLPKDAYTPDFMAASDCMLGKI-----GYGTVSEALAYKLPFVF 304 (992)
Q Consensus 246 -~~~~~Vv~G~~~~~---------------l~~nv~v~~f~~~~p~lL~aaDlvIt~~-----G~~Tv~Eal~~GvP~V~ 304 (992)
.++.+++.|..... +.++|++.++.++++++|+.||++|..+ ..++++||+++|+|+|+
T Consensus 214 ~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~ 293 (355)
T cd03819 214 DPDVHLLIVGDAQGRRFYYAELLELIKRLGLQDRVTFVGHCSDMPAAYALADIVVSASTEPEAFGRTAVEAQAMGRPVIA 293 (355)
T ss_pred CCCeEEEEEECCcccchHHHHHHHHHHHcCCcceEEEcCCcccHHHHHHhCCEEEecCCCCCCCchHHHHHHhcCCCEEE
Confidence 56788888865321 2467999999888999999999999755 23699999999999999
Q ss_pred EeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhh
Q 001947 305 VRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (992)
Q Consensus 305 iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~ 348 (992)
....+. .+.+.+.+.|..++.++ .+.+.++|.+++.
T Consensus 294 ~~~~~~------~e~i~~~~~g~~~~~~~--~~~l~~~i~~~~~ 329 (355)
T cd03819 294 SDHGGA------RETVRPGETGLLVPPGD--AEALAQALDQILS 329 (355)
T ss_pred cCCCCc------HHHHhCCCceEEeCCCC--HHHHHHHHHHHHh
Confidence 764332 33466666888887655 4788888876654
No 110
>PRK10307 putative glycosyl transferase; Provisional
Probab=98.98 E-value=2.9e-07 Score=107.74 Aligned_cols=131 Identities=18% Similarity=0.223 Sum_probs=88.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hC-CCCcEEEEeCCCCCC---------C-CCCeEEcCCCC--
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL-PSGWKCLVCGASDSQ---------L-PPNFIKLPKDA-- 271 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~-~~~~~~Vv~G~~~~~---------l-~~nv~v~~f~~-- 271 (992)
..+++.++++++. .++++.|+.... . .++++ +. .+++++++.|..... . .+|+++.|+++
T Consensus 217 ~~~~~~~~~~~~~-~~i~~~G~l~~~kg~~~li~a~~~l~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~v~f~G~~~~~ 295 (412)
T PRK10307 217 DALRAQLGLPDGK-KIVLYSGNIGEKQGLELVIDAARRLRDRPDLIFVICGQGGGKARLEKMAQCRGLPNVHFLPLQPYD 295 (412)
T ss_pred HHHHHHcCCCCCC-EEEEEcCccccccCHHHHHHHHHHhccCCCeEEEEECCChhHHHHHHHHHHcCCCceEEeCCCCHH
Confidence 3567778876554 566778877653 2 24443 22 245788888875421 1 24799899874
Q ss_pred CHHHHHhhcCEEEec--C-C-----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 272 YTPDFMAASDCMLGK--I-G-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~--~-G-----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.++++|+.||++|.. . + .+.+.|+|++|+|+|+.+.++. + ..+.++ +.|+.++..+ ++.|.++|
T Consensus 296 ~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~-~---~~~~i~--~~G~~~~~~d--~~~la~~i 367 (412)
T PRK10307 296 RLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGT-E---LGQLVE--GIGVCVEPES--VEALVAAI 367 (412)
T ss_pred HHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCc-h---HHHHHh--CCcEEeCCCC--HHHHHHHH
Confidence 577899999998742 1 2 2347899999999999875432 2 122333 7888887666 47899999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.++++++
T Consensus 368 ~~l~~~~ 374 (412)
T PRK10307 368 AALARQA 374 (412)
T ss_pred HHHHhCH
Confidence 9998765
No 111
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=98.98 E-value=9.6e-08 Score=108.73 Aligned_cols=129 Identities=24% Similarity=0.204 Sum_probs=89.2
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh--h-hHHH---hhC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHH
Q 001947 214 RKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTP 274 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~---~l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p 274 (992)
++..+...+ ++++++.|+.... . .+++ .+. .+++.++++|..... +.+++.+.++.+.++
T Consensus 183 ~~~~~~~~~-~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~ 261 (358)
T cd03812 183 RRELGILED-KFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLLVGDGELEEEIKKKVKELGLEDKVIFLGVRNDVP 261 (358)
T ss_pred HHHcCCCCC-CEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhcCCCCcEEEecccCCHH
Confidence 444454444 4567777876652 2 2333 232 256788888865431 467899999888899
Q ss_pred HHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 275 DFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 275 ~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++|+.||++|..+ -.++++|||++|+|+|+...++..|. +++ +.+......+ ++.|.++|.++++++
T Consensus 262 ~~~~~adi~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~~~~~------i~~-~~~~~~~~~~--~~~~a~~i~~l~~~~ 332 (358)
T cd03812 262 ELLQAMDVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVD------LTD-LVKFLSLDES--PEIWAEEILKLKSED 332 (358)
T ss_pred HHHHhcCEEEecccccCCCHHHHHHHHhCCCEEEEcCCchhhh------hcc-CccEEeCCCC--HHHHHHHHHHHHhCc
Confidence 9999999999753 34799999999999999876554433 444 5555544333 689999999999887
Q ss_pred CC
Q 001947 351 PC 352 (992)
Q Consensus 351 ~~ 352 (992)
..
T Consensus 333 ~~ 334 (358)
T cd03812 333 RR 334 (358)
T ss_pred ch
Confidence 54
No 112
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=98.97 E-value=1e-07 Score=107.43 Aligned_cols=129 Identities=20% Similarity=0.197 Sum_probs=89.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCCC------------CCCCeEEcCCC
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ------------LPPNFIKLPKD 270 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~~------------l~~nv~v~~f~ 270 (992)
...++.++++++. .++++.|+.... . .+++. +. .+++.++++|..... +..++.+.++.
T Consensus 181 ~~~~~~~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~ 259 (365)
T cd03807 181 ARLREELGLPEDT-FLIGIVARLHPQKDHATLLRAAALLLKKFPNARLLLVGDGPDRANLELLALKELGLEDKVILLGER 259 (365)
T ss_pred HHHHHhcCCCCCC-eEEEEecccchhcCHHHHHHHHHHHHHhCCCeEEEEecCCcchhHHHHHHHHhcCCCceEEEcccc
Confidence 3455677776554 566777876552 2 23332 22 246788888865421 34678888888
Q ss_pred CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 001947 271 AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (992)
Q Consensus 271 ~~~p~lL~aaDlvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~l 346 (992)
++++++|+.||++|..+. .+++.||+++|+|+|+.+.++. ...+.+ .|..+...+ ++.+.+++.++
T Consensus 260 ~~~~~~~~~adi~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~~~------~e~~~~--~g~~~~~~~--~~~l~~~i~~l 329 (365)
T cd03807 260 SDVPALLNALDVFVLSSLSEGFPNVLLEAMACGLPVVATDVGDN------AELVGD--TGFLVPPGD--PEALAEAIEAL 329 (365)
T ss_pred ccHHHHHHhCCEEEeCCccccCCcHHHHHHhcCCCEEEcCCCCh------HHHhhc--CCEEeCCCC--HHHHHHHHHHH
Confidence 888999999999997543 3699999999999999765433 333444 666676554 57899999999
Q ss_pred hhCC
Q 001947 347 ISLK 350 (992)
Q Consensus 347 l~~~ 350 (992)
++++
T Consensus 330 ~~~~ 333 (365)
T cd03807 330 LADP 333 (365)
T ss_pred HhCh
Confidence 8865
No 113
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.96 E-value=1.8e-07 Score=114.60 Aligned_cols=121 Identities=9% Similarity=0.006 Sum_probs=86.2
Q ss_pred CcEEEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEE
Q 001947 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlv 283 (992)
..+++++.|..... . .++++ +. .+++.+++.|..... +.++|++.||.++++.+|+.+|++
T Consensus 516 ~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~~p~~~LvIvG~G~~~~~L~~l~~~lgL~~~V~flG~~~dv~~ll~aaDv~ 595 (694)
T PRK15179 516 ARFTVGTVMRVDDNKRPFLWVEAAQRFAASHPKVRFIMVGGGPLLESVREFAQRLGMGERILFTGLSRRVGYWLTQFNAF 595 (694)
T ss_pred CCeEEEEEEeCCccCCHHHHHHHHHHHHHHCcCeEEEEEccCcchHHHHHHHHHcCCCCcEEEcCCcchHHHHHHhcCEE
Confidence 34466677765442 2 23443 21 256888888865421 457899999999999999999999
Q ss_pred EecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhC
Q 001947 284 LGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (992)
Q Consensus 284 It~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~ 349 (992)
|..+ | .+++.|||++|+|+|+....+. .+.+++...|+.++..+..++.|.++|.+++.+
T Consensus 596 VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~------~EiV~dg~~GlLv~~~d~~~~~La~aL~~ll~~ 659 (694)
T PRK15179 596 LLLSRFEGLPNVLIEAQFSGVPVVTTLAGGA------GEAVQEGVTGLTLPADTVTAPDVAEALARIHDM 659 (694)
T ss_pred EeccccccchHHHHHHHHcCCeEEEECCCCh------HHHccCCCCEEEeCCCCCChHHHHHHHHHHHhC
Confidence 9632 3 4689999999999999875432 344666668999987776667888888887754
No 114
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=98.96 E-value=1.4e-07 Score=105.58 Aligned_cols=116 Identities=16% Similarity=0.063 Sum_probs=79.4
Q ss_pred CCcEEEEEcCCCCCh---hhHHHh---hCC--CCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCE
Q 001947 222 DVKLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDC 282 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~---~~ll~~---l~~--~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDl 282 (992)
+.+.++++.|+.... ..+++. +.. .++.+++.|..... +.+++.+.++.++++++|..||+
T Consensus 187 ~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~d~ 266 (353)
T cd03811 187 PDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVILGDGPLREELEALAKELGLADRVHFLGFQSNPYPYLKAADL 266 (353)
T ss_pred CCceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEEEcCCccHHHHHHHHHhcCCCccEEEecccCCHHHHHHhCCE
Confidence 345677788876542 223332 322 36778888865421 35789999998888899999999
Q ss_pred EEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 001947 283 MLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (992)
Q Consensus 283 vIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ 345 (992)
+|..+ ..+++.||+++|+|+|+.+.++ ..+.+++...|..++..+ .+.+...+..
T Consensus 267 ~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~------~~e~i~~~~~g~~~~~~~--~~~~~~~~~~ 325 (353)
T cd03811 267 FVLSSRYEGFPNVLLEAMALGTPVVATDCPG------PREILEDGENGLLVPVGD--EAALAAAALA 325 (353)
T ss_pred EEeCcccCCCCcHHHHHHHhCCCEEEcCCCC------hHHHhcCCCceEEECCCC--HHHHHHHHHH
Confidence 99643 3468999999999999976442 345677888899887655 3555333333
No 115
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=98.93 E-value=1.6e-07 Score=107.76 Aligned_cols=143 Identities=19% Similarity=0.179 Sum_probs=91.8
Q ss_pred HHHhCCCCCCcEEEEEcCCCCC---h---hhHHHh---hCCCCcEEEEeCCCC--CC-------C---CCCeEEcCCC--
Q 001947 214 RKELGIEDDVKLLILNFGGQPA---G---WKLKEE---YLPSGWKCLVCGASD--SQ-------L---PPNFIKLPKD-- 270 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~~~---~---~~ll~~---l~~~~~~~Vv~G~~~--~~-------l---~~nv~v~~f~-- 270 (992)
++.++++ ++++|++++|+... . ..++++ +...++.++..|... .. + .+++++.++.
T Consensus 190 ~~~~~~~-~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~~~~l~~~~~~~~~~~~~v~~~~~~~~ 268 (363)
T cd03786 190 LELLGLL-PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRTRPRIREAGLEFLGHHPNVLLISPLGY 268 (363)
T ss_pred hhhcccC-CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCChHHHHHHHHHhhccCCCCEEEECCcCH
Confidence 3456664 56678888887653 1 123343 222235555555332 11 2 4678877654
Q ss_pred CCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 271 AYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 271 ~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.+++.+|.+||++|+.+| +.+.|++++|+|+|+++.. ++ +..+.+.|+++.+.. +++.+.+++.++++++
T Consensus 269 ~~~~~l~~~ad~~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~----~~~~~~~g~~~~~~~---~~~~i~~~i~~ll~~~ 338 (363)
T cd03786 269 LYFLLLLKNADLVLTDSG-GIQEEASFLGVPVLNLRDR--TE----RPETVESGTNVLVGT---DPEAILAAIEKLLSDE 338 (363)
T ss_pred HHHHHHHHcCcEEEEcCc-cHHhhhhhcCCCEEeeCCC--Cc----cchhhheeeEEecCC---CHHHHHHHHHHHhcCc
Confidence 467889999999999999 7788999999999999732 22 234566787766642 2578899999999876
Q ss_pred CCcc-------CCCCHHHHHHHHH
Q 001947 351 PCYE-------GGINGGEVAAHIL 367 (992)
Q Consensus 351 ~~~~-------~~~~G~~~aA~~I 367 (992)
.... ..++.++++++.|
T Consensus 339 ~~~~~~~~~~~~~~~a~~~I~~~l 362 (363)
T cd03786 339 FAYSLMSINPYGDGNASERIVEIL 362 (363)
T ss_pred hhhhcCCCCCCCCCHHHHHHHHHh
Confidence 4431 3445566665554
No 116
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.93 E-value=2.9e-07 Score=105.92 Aligned_cols=237 Identities=16% Similarity=0.059 Sum_probs=129.4
Q ss_pred HHHHHHHHHcCCCcEEEECCC----chHHHHHHHcCCcEEEEec----Cc----hh-HHHHHHHhhhccchHHHHHHHHh
Q 001947 107 LKDEVEWLNSIKADLVVSDVV----PVACRAAADAGIRSVCVTN----FS----WD-FIYAEYVMAAGHHHRSIVWQIAE 173 (992)
Q Consensus 107 l~~~~~~L~~~kPDlVVsD~~----~~a~~aA~~~gIP~v~is~----~~----~~-~~~~~~~~~~~~~~~~i~~~l~~ 173 (992)
+.+..+++++++||+|++... .++.++|..+|||++.+.. +. |. ...+.. ...+..
T Consensus 75 ~~~l~~~l~~~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~~~~~~~~~~r~~-----------~~~~ad 143 (365)
T TIGR00236 75 LEGLEELLLEEKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDRYSPMPEEINRQL-----------TGHIAD 143 (365)
T ss_pred HHHHHHHHHHcCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCCCCCCccHHHHHH-----------HHHHHH
Confidence 455577889999999997632 4467788899999986521 10 11 111111 111111
Q ss_pred h-cccc----ceeeecCCCCCCCCCCceeecCcccc---cC-CCChHHHHHHhCCCCCCcEEEEEcCCCCC---h-hhHH
Q 001947 174 D-YSHC----EFLIRLPGYCPMPAFRDVIDVPLVVR---RL-HKSRKEVRKELGIEDDVKLLILNFGGQPA---G-WKLK 240 (992)
Q Consensus 174 ~-y~~~----d~ll~~~~~~~~p~~~~v~~vp~~~~---~~-~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~---~-~~ll 240 (992)
. +..+ +.+... ...+....+++.|.+.. .. ...+.++++.++ .++++|+++++.... + ..++
T Consensus 144 ~~~~~s~~~~~~l~~~---G~~~~~I~vign~~~d~~~~~~~~~~~~~~~~~~~--~~~~~vl~~~hr~~~~~k~~~~ll 218 (365)
T TIGR00236 144 LHFAPTEQAKDNLLRE---NVKADSIFVTGNTVIDALLTNVEIAYSSPVLSEFG--EDKRYILLTLHRRENVGEPLENIF 218 (365)
T ss_pred hccCCCHHHHHHHHHc---CCCcccEEEeCChHHHHHHHHHhhccchhHHHhcC--CCCCEEEEecCchhhhhhHHHHHH
Confidence 0 0000 011110 01111223444443211 11 111234555565 344677777654322 1 1233
Q ss_pred Hh---hC--CCCcEEEEe-CCCCCC---------CCCCeEEcCCCCC--HHHHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 001947 241 EE---YL--PSGWKCLVC-GASDSQ---------LPPNFIKLPKDAY--TPDFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (992)
Q Consensus 241 ~~---l~--~~~~~~Vv~-G~~~~~---------l~~nv~v~~f~~~--~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V 303 (992)
++ +. .+++.++++ +++... ..+++++++...+ +..+|+.||++|+.+| +.+.||+++|+|+|
T Consensus 219 ~a~~~l~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~ad~vv~~Sg-~~~~EA~a~g~PvI 297 (365)
T TIGR00236 219 KAIREIVEEFEDVQIVYPVHLNPVVREPLHKHLGDSKRVHLIEPLEYLDFLNLAANSHLILTDSG-GVQEEAPSLGKPVL 297 (365)
T ss_pred HHHHHHHHHCCCCEEEEECCCChHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhCCEEEECCh-hHHHHHHHcCCCEE
Confidence 32 22 135666665 333211 2467888876654 3478899999999887 45799999999999
Q ss_pred EEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCc---------cCCCCHHHHHHHHHHH
Q 001947 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY---------EGGINGGEVAAHILQE 369 (992)
Q Consensus 304 ~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~---------~~~~~G~~~aA~~I~~ 369 (992)
.++..+ +++ .+...|.+..+. . +++.+.+++.++++++..+ ..+.+.++++++.|.+
T Consensus 298 ~~~~~~--~~~----e~~~~g~~~lv~-~--d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 298 VLRDTT--ERP----ETVEAGTNKLVG-T--DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred ECCCCC--CCh----HHHhcCceEEeC-C--CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 986433 222 133467777664 2 3678899999998765421 1345666777776654
No 117
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=98.92 E-value=2.8e-07 Score=103.46 Aligned_cols=293 Identities=18% Similarity=0.045 Sum_probs=152.8
Q ss_pred CcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHH
Q 001947 26 GFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKS 105 (992)
Q Consensus 26 G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (992)
+.|+......++++|.+.||+|++++.............. .... .. .. . .... . .... ..
T Consensus 13 ~~G~~~~~~~l~~~L~~~g~~v~i~~~~~~~~~~~~~~~~---~~~~--~~-~~---~-~~~~--~--~~~~------~~ 72 (374)
T cd03801 13 VGGAERHVLELARALAARGHEVTVLTPGDGGLPDEEEVGG---IVVV--RP-PP---L-LRVR--R--LLLL------LL 72 (374)
T ss_pred cCcHhHHHHHHHHHHHhcCceEEEEecCCCCCCceeeecC---ccee--cC-Cc---c-cccc--h--hHHH------HH
Confidence 4799999999999999999999999776422111110000 0000 00 00 0 0000 0 0000 01
Q ss_pred hHHHHHHHHHcCCCcEEEECCCchHH---HHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceee
Q 001947 106 ILKDEVEWLNSIKADLVVSDVVPVAC---RAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (992)
Q Consensus 106 ~l~~~~~~L~~~kPDlVVsD~~~~a~---~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~d~ll 182 (992)
.......++++.+||+|+........ ..+...++|++...+-.+....... .. .............+..++.++
T Consensus 73 ~~~~~~~~~~~~~~Dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~d~~i 149 (374)
T cd03801 73 LALRLRRLLRRERFDVVHAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNE-LG--LLLKLARALERRALRRADRII 149 (374)
T ss_pred HHHHHHHHhhhcCCcEEEEechhHHHHHHHHHHhcCCcEEEEeccchhhccccc-hh--HHHHHHHHHHHHHHHhCCEEE
Confidence 12334556788899999987633322 4567789998875321111000000 00 000000000111122223222
Q ss_pred ecCCC--------CCCC-CCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hCC--
Q 001947 183 RLPGY--------CPMP-AFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YLP-- 245 (992)
Q Consensus 183 ~~~~~--------~~~p-~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~~-- 245 (992)
..... ...+ ....+.+.|...........+.+...... ..+.+++.+|+.... ..+++. +..
T Consensus 150 ~~s~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~ 228 (374)
T cd03801 150 AVSEATREELRELGGVPPEKITVIPNGVDTERFRPAPRAARRRLGIP-EDEPVILFVGRLVPRKGVDLLLEALAKLRKEY 228 (374)
T ss_pred EecHHHHHHHHhcCCCCCCcEEEecCcccccccCccchHHHhhcCCc-CCCeEEEEecchhhhcCHHHHHHHHHHHhhhc
Confidence 21110 0000 01112222221111111112222333333 334566777776542 223332 222
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEEcCCC--CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCC
Q 001947 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKD--AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 246 ~~~~~Vv~G~~~~~-----------l~~nv~v~~f~--~~~p~lL~aaDlvIt~----~G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
+++.++++|..... .+.++.+.+++ +.+.++|..||++|.. +..+++.||+++|+|+|+.+.+
T Consensus 229 ~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~ 308 (374)
T cd03801 229 PDVRLVIVGDGPLREELEALAAELGLGDRVTFLGFVPDEDLPALYAAADVFVLPSLYEGFGLVLLEAMAAGLPVVASDVG 308 (374)
T ss_pred CCeEEEEEeCcHHHHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhcCEEEecchhccccchHHHHHHcCCcEEEeCCC
Confidence 35778888854321 46789999988 5677999999999963 3457899999999999998754
Q ss_pred CCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 309 ~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.. ...+++.+.|..++..+ ++.+.++|.++++++
T Consensus 309 ~~------~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 342 (374)
T cd03801 309 GI------PEVVEDGETGLLVPPGD--PEALAEAILRLLDDP 342 (374)
T ss_pred Ch------hHHhcCCcceEEeCCCC--HHHHHHHHHHHHcCh
Confidence 43 34466678898887665 578999999998765
No 118
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=98.91 E-value=2.9e-07 Score=107.26 Aligned_cols=133 Identities=20% Similarity=0.168 Sum_probs=89.9
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hCC--CC--cEEEEeCCCC----C---C---------CCC
Q 001947 209 SRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YLP--SG--WKCLVCGASD----S---Q---------LPP 262 (992)
Q Consensus 209 ~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~~--~~--~~~Vv~G~~~----~---~---------l~~ 262 (992)
.+...++.++++++++ ++++.|..... . .+++. +.. ++ +.++++|... + . +.+
T Consensus 205 ~~~~~~~~~~~~~~~~-~i~~~G~l~~~K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~l~~ 283 (405)
T TIGR03449 205 DRATERARLGLPLDTK-VVAFVGRIQPLKAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSGLATPDALIELAAELGIAD 283 (405)
T ss_pred cHHHHHHhcCCCCCCc-EEEEecCCCcccCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCcchHHHHHHHHHHHcCCCc
Confidence 3455677788765554 56777877653 2 23332 211 23 6777777411 1 0 356
Q ss_pred CeEEcCCCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCCh
Q 001947 263 NFIKLPKDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (992)
Q Consensus 263 nv~v~~f~~--~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~ 336 (992)
++++.++.+ .++++|+.||++|... | ..++.|||++|+|+|+...++..| .+++...|..++..+ .
T Consensus 284 ~v~~~g~~~~~~~~~~l~~ad~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e------~i~~~~~g~~~~~~d--~ 355 (405)
T TIGR03449 284 RVRFLPPRPPEELVHVYRAADVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPV------AVADGETGLLVDGHD--P 355 (405)
T ss_pred eEEECCCCCHHHHHHHHHhCCEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHh------hhccCCceEECCCCC--H
Confidence 899998874 4668999999999532 3 358999999999999987554333 366667888887655 5
Q ss_pred hhHHHHHHHHhhCC
Q 001947 337 GHWKPYLERAISLK 350 (992)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (992)
+.+.++|.++++++
T Consensus 356 ~~la~~i~~~l~~~ 369 (405)
T TIGR03449 356 ADWADALARLLDDP 369 (405)
T ss_pred HHHHHHHHHHHhCH
Confidence 78999999998754
No 119
>COG1907 Predicted archaeal sugar kinases [General function prediction only]
Probab=98.88 E-value=3.2e-07 Score=96.96 Aligned_cols=225 Identities=20% Similarity=0.287 Sum_probs=148.7
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEe
Q 001947 629 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 708 (992)
Q Consensus 629 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~ 708 (992)
.|++|.|.+.+|...||||-..+..|++.++++++|++++-+||+....+ |--||+ --++--+||+ .+|
T Consensus 70 ~gv~I~I~~~~P~HvGLGS~TQlaLa~a~ai~~i~gl~~~~~elA~~vgR------G~tSgi-Gv~afe~GGF----IVD 138 (312)
T COG1907 70 EGVKIEIRSDIPAHVGLGSTTQLALAVASAILEIYGLELSIRELAFAVGR------GGTSGI-GVYAFEYGGF----IVD 138 (312)
T ss_pred CceEEEEEecCchhcCCChHHHHHHHHHHHHHHHhcCCCCHHHHHHHHcc------CCccce-eEEEEEECCE----EEE
Confidence 68999999999999999999999999999999999999999998877764 444553 4466677883 344
Q ss_pred ec------Ccc---ceeeecCCCCeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCc
Q 001947 709 CQ------PAE---LLGVVEIPSHIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEP 779 (992)
Q Consensus 709 ~~------~~~---~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~ 779 (992)
.- |.. ..-...+|.+|.||++-..++|.. +. +|
T Consensus 139 GGh~~~f~ps~~sP~I~R~dfPedW~~VlaIP~~~rg~----~~-~~--------------------------------- 180 (312)
T COG1907 139 GGHSFGFLPSSASPLIFRLDFPEDWRFVLAIPEVERGV----SG-RR--------------------------------- 180 (312)
T ss_pred CCcccCcccCCCCceeeeecCCCceEEEEEecCCCccc----cc-hH---------------------------------
Confidence 21 101 013456788999999965555421 11 11
Q ss_pred chhhhhHHHHhhhhHHHhcCChHHHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHH
Q 001947 780 EVDGVELLEAEASLDYLCNLSPHRFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKA 859 (992)
Q Consensus 780 ~~~~~~~l~~~~~~~~L~~~~~~~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~ 859 (992)
...++ +..|-+++++... +.|++ ...
T Consensus 181 ---E~~if------~~~~p~p~~~~~~----------------------------------------ls~~v-----Lm~ 206 (312)
T COG1907 181 ---EVDIF------KKYCPVPLEEVGE----------------------------------------LSHRV-----LMK 206 (312)
T ss_pred ---HHHHH------HhcCCCCHHHHHH----------------------------------------HHHHH-----HHH
Confidence 01111 1234344433222 12221 123
Q ss_pred HHHHHhccCChhHHHHHHHHHHHhhhhh---hh---cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCce
Q 001947 860 FKALLTAAASDDQLTSLGELLYQCHYSY---SA---CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGT 933 (992)
Q Consensus 860 ~~~~l~~~~~~~d~~~lG~lm~~sH~sl---r~---~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~ 933 (992)
+.-++-.+ |++.+|+.|++-|... -+ -++-|+.+..+++.+.+ + +|||-+| -||.|
T Consensus 207 mmPavvE~----Die~fg~~l~~iQ~l~g~~f~~~e~~~~~~~V~~iv~~m~~-----------~-a~~agqS--SwGPt 268 (312)
T COG1907 207 MMPAVVER----DIESFGEALNEIQELGGKWFKKVEGGLQREDVKEIVDEMVE-----------A-AYGAGQS--SWGPT 268 (312)
T ss_pred HhHHHHhh----CHHHHHHHHHHHHHHHhhhhhhhhceeccHHHHHHHHHHHH-----------h-ccccccc--ccCCE
Confidence 33344343 9999999999977776 33 25678999999998887 4 6888777 68899
Q ss_pred EEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEee--cCCCCcee
Q 001947 934 ICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEG--SSPGAGKF 976 (992)
Q Consensus 934 vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~--~~~Ga~~~ 976 (992)
|..+.++... ..+..++.+.+. ..|...+++.. .+-||-.+
T Consensus 269 vY~i~d~~~~-~~~~~~~~~~~~-~~g~~gev~vT~~rN~Ga~i~ 311 (312)
T COG1907 269 VYGIVDSREA-GSVVRKLIDILL-EEGIGGEVFVTKARNRGAEIL 311 (312)
T ss_pred EEEecccccc-chHHHHHHHHHH-hcCCceEEEEeccCCCCceec
Confidence 9988876653 234455554443 56788888886 47776554
No 120
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.87 E-value=1.4e-07 Score=108.98 Aligned_cols=128 Identities=19% Similarity=0.097 Sum_probs=87.2
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hC--CCCcEEEEeCCCCCC-----------------CCCCeEEcC
Q 001947 214 RKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------------LPPNFIKLP 268 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~--~~~~~~Vv~G~~~~~-----------------l~~nv~v~~ 268 (992)
++.+..+.++ .++++.|+.... ..+++. +. .+++.++++|..... +.+|+.+.+
T Consensus 211 ~~~~~~~~~~-~~i~~~gr~~~~k~~~~ll~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~g 289 (398)
T cd03800 211 RARLLRDPDK-PRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEELRELARELGVIDRVDFPG 289 (398)
T ss_pred HHhhccCCCC-cEEEEEcccccccCHHHHHHHHHHHHHhCCCeEEEEEECCCCcchhhhhHHHHHHHHhcCCCceEEEec
Confidence 3444554444 466777876652 233433 22 246788887753310 246789999
Q ss_pred CCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHH
Q 001947 269 KDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (992)
Q Consensus 269 f~~--~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~a 342 (992)
+++ .+..+|+.||+++..+ | ..++.|||++|+|+|+.+..+ +.+.+++.+.|..++..+ .+.|.++
T Consensus 290 ~~~~~~~~~~~~~adi~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~------~~e~i~~~~~g~~~~~~~--~~~l~~~ 361 (398)
T cd03800 290 RVSREDLPALYRAADVFVNPALYEPFGLTALEAMACGLPVVATAVGG------PRDIVVDGVTGLLVDPRD--PEALAAA 361 (398)
T ss_pred cCCHHHHHHHHHhCCEEEecccccccCcHHHHHHhcCCCEEECCCCC------HHHHccCCCCeEEeCCCC--HHHHHHH
Confidence 875 4668999999999643 2 368999999999999876432 345577778899887655 5789999
Q ss_pred HHHHhhCC
Q 001947 343 LERAISLK 350 (992)
Q Consensus 343 l~~ll~~~ 350 (992)
|.++++++
T Consensus 362 i~~l~~~~ 369 (398)
T cd03800 362 LRRLLTDP 369 (398)
T ss_pred HHHHHhCH
Confidence 99998754
No 121
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.87 E-value=2.9e-07 Score=108.28 Aligned_cols=82 Identities=12% Similarity=0.037 Sum_probs=58.1
Q ss_pred eEEcCCCCCHHHHHhhcCEE-Ee----cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhh
Q 001947 264 FIKLPKDAYTPDFMAASDCM-LG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGH 338 (992)
Q Consensus 264 v~v~~f~~~~p~lL~aaDlv-It----~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~ 338 (992)
+.+.+...+++.+|+.||++ ++ .+|..++.||+++|+|+|+.|..+ .+....+.+.+.|+++... + ++.
T Consensus 304 v~l~~~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~--~~~e~~~~~~~~g~~~~~~--d--~~~ 377 (425)
T PRK05749 304 VLLGDTMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTF--NFKEIFERLLQAGAAIQVE--D--AED 377 (425)
T ss_pred EEEEecHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHhCCCEEECCCcc--CHHHHHHHHHHCCCeEEEC--C--HHH
Confidence 44444445688999999994 53 245568999999999999987433 2345566666777765533 3 578
Q ss_pred HHHHHHHHhhCCC
Q 001947 339 WKPYLERAISLKP 351 (992)
Q Consensus 339 l~~al~~ll~~~~ 351 (992)
|.++|.++++++.
T Consensus 378 La~~l~~ll~~~~ 390 (425)
T PRK05749 378 LAKAVTYLLTDPD 390 (425)
T ss_pred HHHHHHHHhcCHH
Confidence 8999999987653
No 122
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=98.86 E-value=7e-07 Score=101.01 Aligned_cols=126 Identities=21% Similarity=0.221 Sum_probs=85.7
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh--h-hHHH---hhCC--CCcEEEEeCCCCCC-------------CCCCeEEcCCCC-
Q 001947 214 RKELGIEDDVKLLILNFGGQPAG--W-KLKE---EYLP--SGWKCLVCGASDSQ-------------LPPNFIKLPKDA- 271 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~---~l~~--~~~~~Vv~G~~~~~-------------l~~nv~v~~f~~- 271 (992)
++.++.+.++ .++++.|+.... . .+++ .+.. +++.++++|..... +.+++++.++++
T Consensus 194 ~~~~~~~~~~-~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~ 272 (375)
T cd03821 194 RRKFPILPDK-RIILFLGRLHPKKGLDLLIEAFAKLAERFPDWHLVIAGPDEGGYRAELKQIAAALGLEDRVTFTGMLYG 272 (375)
T ss_pred hhhccCCCCC-cEEEEEeCcchhcCHHHHHHHHHHhhhhcCCeEEEEECCCCcchHHHHHHHHHhcCccceEEEcCCCCh
Confidence 4445544444 456777776542 2 2333 2332 46788888865321 357899999886
Q ss_pred -CHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 001947 272 -YTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (992)
Q Consensus 272 -~~p~lL~aaDlvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~l 346 (992)
.+.++|..||++|..+- .+++.|||++|+|+|+.+..+. ...+.. +.|...+.+ ++.+.++|.++
T Consensus 273 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~------~~~~~~-~~~~~~~~~---~~~~~~~i~~l 342 (375)
T cd03821 273 EDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVPW------QELIEY-GCGWVVDDD---VDALAAALRRA 342 (375)
T ss_pred HHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCH------HHHhhc-CceEEeCCC---hHHHHHHHHHH
Confidence 56789999999997542 4689999999999999875433 233445 778777643 37889999999
Q ss_pred hhCC
Q 001947 347 ISLK 350 (992)
Q Consensus 347 l~~~ 350 (992)
++++
T Consensus 343 ~~~~ 346 (375)
T cd03821 343 LELP 346 (375)
T ss_pred HhCH
Confidence 8764
No 123
>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism]
Probab=98.84 E-value=7.2e-08 Score=106.94 Aligned_cols=102 Identities=20% Similarity=0.257 Sum_probs=71.4
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHH----HHHHHHHHHhccccCCCCCccchhhhhccCcceE
Q 001947 629 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPR----DLALLCQKVENHIVGAPCGVMDQMASACGEANKL 704 (992)
Q Consensus 629 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~----el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~ 704 (992)
.||+|...|++|-|+|||.|+-+....++|+....|.--..+ .+.....+.|.. .-+..|++||.-.++-|..+-
T Consensus 690 ~GfeihT~SdLPHGSGLGTSSIlA~TaLaAi~~aagr~~gTeaLiHailHtvlrlEQi-lTTGGGWQDQ~G~im~GIK~g 768 (948)
T KOG4644|consen 690 CGFEIHTSSDLPHGSGLGTSSILACTALAAICAAAGRADGTEALIHAILHTVLRLEQI-LTTGGGWQDQCGAIMEGIKKG 768 (948)
T ss_pred CceEeeccccCCCCCCcchHHHHHHHHHHHHHHhhccccchhHhHHHHHHHHHHHHHH-hhcCCchhhhccchhhhhhhc
Confidence 699999999999999999999888888888888877644333 344444557754 567789999998888885431
Q ss_pred EEEeec---Cccc-eeeecCCC------CeEEEEEeCCCc
Q 001947 705 LAMVCQ---PAEL-LGVVEIPS------HIRFWGIDSGIR 734 (992)
Q Consensus 705 ~~~~~~---~~~~-~~~v~~p~------~~~~vl~dsgi~ 734 (992)
.|+ +..+ .+.+.+|+ +=++++++||-.
T Consensus 769 ---r~rael~~~ie~eeiTipe~f~ekL~dhLLLVYTGKT 805 (948)
T KOG4644|consen 769 ---RCRAELNHGIEHEEITIPEEFREKLEDHLLLVYTGKT 805 (948)
T ss_pred ---cchhhccCCceeeeecCCHHHHHHHhhcEEEEEeCch
Confidence 122 2221 24556664 336788888854
No 124
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=98.84 E-value=1.1e-06 Score=101.87 Aligned_cols=120 Identities=13% Similarity=-0.022 Sum_probs=80.8
Q ss_pred CCcEEEEEcCCCCCh---hhHHH---hhCC-----CCcEEEEeCCCCC-------------------C-CCCCeEEcCCC
Q 001947 222 DVKLLILNFGGQPAG---WKLKE---EYLP-----SGWKCLVCGASDS-------------------Q-LPPNFIKLPKD 270 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~---~~ll~---~l~~-----~~~~~Vv~G~~~~-------------------~-l~~nv~v~~f~ 270 (992)
+..+++++.|..... ..+++ .+.. +++.+++.|.... . +.+++.+.|+.
T Consensus 209 ~~~~~i~~~grl~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~ 288 (392)
T cd03805 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPRVAENVEYLEELQRLAEELLLLEDQVIFLPSI 288 (392)
T ss_pred CCceEEEEEeeecccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHhcCCCceEEEeCCC
Confidence 344566777876542 12333 2321 4678888885421 1 24678899987
Q ss_pred CC--HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 271 AY--TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 271 ~~--~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
+. +.++|..||+++..+ | ..++.|||++|+|+|+...++..| .+...+.|..++. +++.+.++|.
T Consensus 289 ~~~~~~~~l~~ad~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e------~i~~~~~g~~~~~---~~~~~a~~i~ 359 (392)
T cd03805 289 SDSQKELLLSSARALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLE------TVVDGETGFLCEP---TPEEFAEAML 359 (392)
T ss_pred ChHHHHHHHhhCeEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHH------HhccCCceEEeCC---CHHHHHHHHH
Confidence 54 358899999999633 2 358899999999999987544333 3666677887753 3678899999
Q ss_pred HHhhCC
Q 001947 345 RAISLK 350 (992)
Q Consensus 345 ~ll~~~ 350 (992)
++++++
T Consensus 360 ~l~~~~ 365 (392)
T cd03805 360 KLANDP 365 (392)
T ss_pred HHHhCh
Confidence 998765
No 125
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=98.81 E-value=8.7e-07 Score=100.54 Aligned_cols=121 Identities=17% Similarity=0.099 Sum_probs=83.8
Q ss_pred CCcEEEEEcCCCCCh---hhHHH---hhCC--CCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhc
Q 001947 222 DVKLLILNFGGQPAG---WKLKE---EYLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAAS 280 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~---~~ll~---~l~~--~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aa 280 (992)
+.+++++++|+.... ..+++ .+.. +++.++++|..... +++|+++.++.+ .+..+|+.|
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~a 256 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIVGDGPLRDELEALIAELGLEDRVTLLGAKSQEEVRELLRAA 256 (355)
T ss_pred CCCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEEECCccHHHHHHHHHHcCCCCeEEECCcCChHHHHHHHHhC
Confidence 345566777776542 22333 2322 46778888865431 367899999884 567899999
Q ss_pred CEEEec----------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 281 DCMLGK----------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 281 DlvIt~----------~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
|++|.. +..+++.||+++|+|+|+.+..... +.+++...|..++..+ .+.+.++|.++++++
T Consensus 257 di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~------~~i~~~~~g~~~~~~~--~~~l~~~i~~~~~~~ 328 (355)
T cd03799 257 DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIP------ELVEDGETGLLVPPGD--PEALADAIERLLDDP 328 (355)
T ss_pred CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcc------hhhhCCCceEEeCCCC--HHHHHHHHHHHHhCH
Confidence 999973 3346899999999999998754433 2455555888887654 578999999988754
No 126
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=98.81 E-value=8.4e-07 Score=103.37 Aligned_cols=118 Identities=17% Similarity=0.051 Sum_probs=78.8
Q ss_pred CcEEEEEcCCCCCh--h-hHHHh---h--CCCCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhcC
Q 001947 223 VKLLILNFGGQPAG--W-KLKEE---Y--LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASD 281 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~~---l--~~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aaD 281 (992)
.++++++.|..... . .+++. + ..+++.+++.|..... +.++|.+.++++ .++.+|+.||
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ad 271 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFIIGGDGPKRILLEEMREKYNLQDRVELLGAVPHERVRDVLVQGH 271 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEEEeCCchHHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 45677788876552 2 23332 2 1357888888865421 356788888864 5778999999
Q ss_pred EEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 282 CMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 282 lvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++|..+ |+ .++.|||++|+|+|+.+..+..| .+. .|.+..... +++.+.+++.+++++.
T Consensus 272 ~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e------~i~-~~~~~~~~~---~~~~l~~~l~~~l~~~ 334 (398)
T cd03796 272 IFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPE------VLP-PDMILLAEP---DVESIVRKLEEAISIL 334 (398)
T ss_pred EEEeCChhhccCHHHHHHHHcCCCEEECCCCCchh------hee-CCceeecCC---CHHHHHHHHHHHHhCh
Confidence 999644 32 49999999999999987655443 233 344444332 3578899999988753
No 127
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.81 E-value=2.2e-08 Score=113.05 Aligned_cols=119 Identities=13% Similarity=0.044 Sum_probs=80.1
Q ss_pred CCcEEEEEcCCCCCh-hhH----HH---hhCCCCcEEEEeCCCCCC-----CC--CCeEEcCCCCCHHHHHhhcCEEEec
Q 001947 222 DVKLLILNFGGQPAG-WKL----KE---EYLPSGWKCLVCGASDSQ-----LP--PNFIKLPKDAYTPDFMAASDCMLGK 286 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~-~~l----l~---~l~~~~~~~Vv~G~~~~~-----l~--~nv~v~~f~~~~p~lL~aaDlvIt~ 286 (992)
+.++|.+..||.+.. ..+ ++ .+.....++++++....+ +. ..+.+. +++.++|.+||++|+.
T Consensus 166 ~~~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~~~i~~~~~~~~~~~~~---~~~~~~m~~aDlal~~ 242 (347)
T PRK14089 166 KEGTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKGKDLKEIYGDISEFEIS---YDTHKALLEAEFAFIC 242 (347)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcHHHHHHHHhcCCCcEEe---ccHHHHHHhhhHHHhc
Confidence 347899999998874 111 12 232222567777765322 11 233333 3567999999999999
Q ss_pred CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH---HcCcEEEE-------------ecCCCChhhHHHHHHH
Q 001947 287 IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEM-------------IRRDLLTGHWKPYLER 345 (992)
Q Consensus 287 ~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le---~~G~Gi~v-------------~~~~~~~~~l~~al~~ 345 (992)
+|..|+ |++.+|+|||+. +...+-|+.||+++. ..|+.-.+ -.++.+++.+.+.+.+
T Consensus 243 SGT~TL-E~al~g~P~Vv~-Yk~~~lty~iak~lv~~~~igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i~~ 315 (347)
T PRK14089 243 SGTATL-EAALIGTPFVLA-YKAKAIDYFIAKMFVKLKHIGLANIFFDFLGKEPLHPELLQEFVTVENLLKAYKE 315 (347)
T ss_pred CcHHHH-HHHHhCCCEEEE-EeCCHHHHHHHHHHHcCCeeehHHHhcCCCcccccCchhhcccCCHHHHHHHHHH
Confidence 997777 999999999994 444567889999998 44554444 2356777788777766
No 128
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=98.80 E-value=6e-07 Score=103.53 Aligned_cols=128 Identities=15% Similarity=0.030 Sum_probs=86.0
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCC---------C-------CCCCeEEc
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS---------Q-------LPPNFIKL 267 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~---------~-------l~~nv~v~ 267 (992)
..+++++++++++ ++++.|..... . .+++. +. .++++++++|.... . +.+++.++
T Consensus 179 ~~~~~~~~~~~~~-~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 257 (372)
T cd03792 179 YILEKYGIDPERP-YITQVSRFDPWKDPFGVIDAYRKVKERVPDPQLVLVGSGATDDPEGWIVYEEVLEYAEGDPDIHVL 257 (372)
T ss_pred HHHHHhCCCCCCc-EEEEEeccccccCcHHHHHHHHHHHhhCCCCEEEEEeCCCCCCchhHHHHHHHHHHhCCCCCeEEE
Confidence 5677788877765 55677876652 2 23332 22 24678888876431 0 24567777
Q ss_pred CCC----CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhH
Q 001947 268 PKD----AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHW 339 (992)
Q Consensus 268 ~f~----~~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l 339 (992)
++. ..++.+|++||+++..+ | ..++.|||++|+|+|+.+.++..|+ +.....|..++. .+.+
T Consensus 258 ~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~------i~~~~~g~~~~~----~~~~ 327 (372)
T cd03792 258 TLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQ------IEDGETGFLVDT----VEEA 327 (372)
T ss_pred ecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhh------cccCCceEEeCC----cHHH
Confidence 765 34668999999999754 2 3589999999999999875544443 666677877653 3567
Q ss_pred HHHHHHHhhCC
Q 001947 340 KPYLERAISLK 350 (992)
Q Consensus 340 ~~al~~ll~~~ 350 (992)
..+|.++++++
T Consensus 328 a~~i~~ll~~~ 338 (372)
T cd03792 328 AVRILYLLRDP 338 (372)
T ss_pred HHHHHHHHcCH
Confidence 77888888654
No 129
>PLN02275 transferase, transferring glycosyl groups
Probab=98.79 E-value=1.2e-06 Score=101.02 Aligned_cols=92 Identities=12% Similarity=0.110 Sum_probs=65.8
Q ss_pred CCcEEEEeCCCCCC---------C-CCCeEEcC-CC--CCHHHHHhhcCEEEe----cCC---hhHHHHHHHcCCcEEEE
Q 001947 246 SGWKCLVCGASDSQ---------L-PPNFIKLP-KD--AYTPDFMAASDCMLG----KIG---YGTVSEALAYKLPFVFV 305 (992)
Q Consensus 246 ~~~~~Vv~G~~~~~---------l-~~nv~v~~-f~--~~~p~lL~aaDlvIt----~~G---~~Tv~Eal~~GvP~V~i 305 (992)
++++++++|.+... + -+|+.+.+ |. ++++++|+.||++|. ..| .+++.|||++|+|+|+.
T Consensus 260 ~~i~l~ivG~G~~~~~l~~~~~~~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~ 339 (371)
T PLN02275 260 PRLLFIITGKGPQKAMYEEKISRLNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAV 339 (371)
T ss_pred CCeEEEEEeCCCCHHHHHHHHHHcCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEe
Confidence 46788888876531 1 14577655 44 467899999999994 112 35899999999999998
Q ss_pred eCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHh
Q 001947 306 RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 306 P~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll 347 (992)
...+ +.+.+++.+.|..++ + ++.|.++|.+++
T Consensus 340 ~~gg------~~eiv~~g~~G~lv~--~--~~~la~~i~~l~ 371 (371)
T PLN02275 340 SYSC------IGELVKDGKNGLLFS--S--SSELADQLLELL 371 (371)
T ss_pred cCCC------hHHHccCCCCeEEEC--C--HHHHHHHHHHhC
Confidence 6432 445577778899886 2 578888887764
No 130
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=98.77 E-value=6.5e-07 Score=100.85 Aligned_cols=113 Identities=17% Similarity=0.114 Sum_probs=78.1
Q ss_pred EEEEcCCCCCh---hhHHHhhCCCCcEEEEeCCCCCC---------C---CCCeEEcCCCCC--HHHHHhhcCEEEecC-
Q 001947 226 LILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDSQ---------L---PPNFIKLPKDAY--TPDFMAASDCMLGKI- 287 (992)
Q Consensus 226 Vlvs~Gg~~~~---~~ll~~l~~~~~~~Vv~G~~~~~---------l---~~nv~v~~f~~~--~p~lL~aaDlvIt~~- 287 (992)
++++.|..... ..+++.+...++.+++.|..... . .+++++.++.++ ++.+|+.+|++|..+
T Consensus 173 ~i~~~Gr~~~~Kg~~~li~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~v~ps~ 252 (335)
T cd03802 173 YLLFLGRISPEKGPHLAIRAARRAGIPLKLAGPVSDPDYFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARALLFPIL 252 (335)
T ss_pred EEEEEEeeccccCHHHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 45666766442 23444444457788888876421 1 478999999864 468999999999532
Q ss_pred ---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhh
Q 001947 288 ---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS 348 (992)
Q Consensus 288 ---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~ 348 (992)
| ..++.|||++|+|+|+.+.++..| .+++...|..++. .+.+.++|.+++.
T Consensus 253 ~~E~~~~~~lEAma~G~PvI~~~~~~~~e------~i~~~~~g~l~~~----~~~l~~~l~~l~~ 307 (335)
T cd03802 253 WEEPFGLVMIEAMACGTPVIAFRRGAVPE------VVEDGVTGFLVDS----VEELAAAVARADR 307 (335)
T ss_pred ccCCcchHHHHHHhcCCCEEEeCCCCchh------heeCCCcEEEeCC----HHHHHHHHHHHhc
Confidence 2 358999999999999987654433 3555457888764 6788888888754
No 131
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=98.77 E-value=4.3e-07 Score=104.28 Aligned_cols=121 Identities=13% Similarity=0.103 Sum_probs=83.4
Q ss_pred cEEEEEcCCCCC----h-hhHHHhh--CCCCcEEEEeCCCCCC-----------CCCCeEEcCCCCC----HHHHHhhcC
Q 001947 224 KLLILNFGGQPA----G-WKLKEEY--LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDAY----TPDFMAASD 281 (992)
Q Consensus 224 ~~Vlvs~Gg~~~----~-~~ll~~l--~~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~----~p~lL~aaD 281 (992)
+.++++.|.... + ..+++++ ...++.+++.|..... ++++|.+.|++++ ++++|+.||
T Consensus 180 ~~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~~~l~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~~d 259 (359)
T PRK09922 180 PAVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDFEKCKAYSRELGIEQRIIWHGWQSQPWEVVQQKIKNVS 259 (359)
T ss_pred CcEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccHHHHHHHHHHcCCCCeEEEecccCCcHHHHHHHHhcCc
Confidence 456677776532 1 2344443 2246788888865421 4678999998754 456677899
Q ss_pred EEEecCC----hhHHHHHHHcCCcEEEEe-CCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC
Q 001947 282 CMLGKIG----YGTVSEALAYKLPFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC 352 (992)
Q Consensus 282 lvIt~~G----~~Tv~Eal~~GvP~V~iP-~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~ 352 (992)
++|..+- ..++.|||++|+|+|+.. ..+.. +.+++...|..++..+ ++.+.++|.++++++..
T Consensus 260 ~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~------eiv~~~~~G~lv~~~d--~~~la~~i~~l~~~~~~ 327 (359)
T PRK09922 260 ALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPR------DIIKPGLNGELYTPGN--IDEFVGKLNKVISGEVK 327 (359)
T ss_pred EEEECCcccCcChHHHHHHHcCCCEEEeCCCCChH------HHccCCCceEEECCCC--HHHHHHHHHHHHhCccc
Confidence 9996432 469999999999999986 33322 3466666788887655 58999999999987753
No 132
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=98.77 E-value=2.4e-07 Score=105.25 Aligned_cols=295 Identities=18% Similarity=0.209 Sum_probs=164.2
Q ss_pred EeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHh
Q 001947 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETA 99 (992)
Q Consensus 20 ~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 99 (992)
|.++|+-.|-.. +..|+++|+++..++.|++-+...+....+.. .+ +.. +-..+....-+.++..+.
T Consensus 2 ~i~AGE~SGD~~-ga~Li~~Lk~~~p~~~~~GvGG~~M~~~G~~~---l~-----d~~----~lsvmG~~Evl~~l~~~~ 68 (373)
T PF02684_consen 2 FISAGEASGDLH-GARLIRALKARDPDIEFYGVGGPRMQAAGVES---LF-----DME----ELSVMGFVEVLKKLPKLK 68 (373)
T ss_pred EEEeeCccHHHH-HHHHHHHHHhhCCCcEEEEEechHHHhCCCce---ec-----chH----HhhhccHHHHHHHHHHHH
Confidence 456777777554 45789999999888888755443333322210 00 000 000111222233333322
Q ss_pred hccHHHhHHHHHHHHHcCCCcEEE-ECCCchHHHHHH---HcCCc--EEEE-ecCchhHHHHHHHhhhccchHHHHHHHH
Q 001947 100 VAPRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAGIR--SVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIA 172 (992)
Q Consensus 100 ~~~~~~~l~~~~~~L~~~kPDlVV-sD~~~~a~~aA~---~~gIP--~v~i-s~~~~~~~~~~~~~~~~~~~~~i~~~l~ 172 (992)
+...+..+.+++.+||+|| .|++......|+ ..|+| ++.+ +.-.|.. +... ++.+.
T Consensus 69 -----~~~~~~~~~~~~~~pd~vIlID~pgFNlrlak~lk~~~~~~~viyYI~PqvWAW--r~~R----------~~~i~ 131 (373)
T PF02684_consen 69 -----RLFRKLVERIKEEKPDVVILIDYPGFNLRLAKKLKKRGIPIKVIYYISPQVWAW--RPGR----------AKKIK 131 (373)
T ss_pred -----HHHHHHHHHHHHcCCCEEEEeCCCCccHHHHHHHHHhCCCceEEEEECCceeee--CccH----------HHHHH
Confidence 2456677888999999999 788777766664 45777 6665 4434421 0000 11122
Q ss_pred hhccccceee-ecCCCCCC---CCC-CceeecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh----hh-HHH
Q 001947 173 EDYSHCEFLI-RLPGYCPM---PAF-RDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG----WK-LKE 241 (992)
Q Consensus 173 ~~y~~~d~ll-~~~~~~~~---p~~-~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~----~~-ll~ 241 (992)
+.. |.++ -+|+..+. ... ..+.+-|..... ....+.+.++.+ +++++++|.+.-||.... .+ +++
T Consensus 132 ~~~---D~ll~ifPFE~~~y~~~g~~~~~VGHPl~d~~~~~~~~~~~~~~~-l~~~~~iIaLLPGSR~~EI~rllP~~l~ 207 (373)
T PF02684_consen 132 KYV---DHLLVIFPFEPEFYKKHGVPVTYVGHPLLDEVKPEPDRAEAREKL-LDPDKPIIALLPGSRKSEIKRLLPIFLE 207 (373)
T ss_pred HHH---hheeECCcccHHHHhccCCCeEEECCcchhhhccCCCHHHHHHhc-CCCCCcEEEEeCCCCHHHHHHHHHHHHH
Confidence 111 2122 23332110 000 123344444332 333456677777 889999999999987653 11 222
Q ss_pred h---hC--CCCcEEEEeCCCCC--C--------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 001947 242 E---YL--PSGWKCLVCGASDS--Q--------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (992)
Q Consensus 242 ~---l~--~~~~~~Vv~G~~~~--~--------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP 306 (992)
. +. .++.++++...... + ...++.+.-......++|++||+++..+| +.+.|++.+|+|||++-
T Consensus 208 aa~~l~~~~p~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~m~~ad~al~~SG-TaTLE~Al~g~P~Vv~Y 286 (373)
T PF02684_consen 208 AAKLLKKQRPDLQFVVPVAPEVHEELIEEILAEYPPDVSIVIIEGESYDAMAAADAALAASG-TATLEAALLGVPMVVAY 286 (373)
T ss_pred HHHHHHHhCCCeEEEEecCCHHHHHHHHHHHHhhCCCCeEEEcCCchHHHHHhCcchhhcCC-HHHHHHHHhCCCEEEEE
Confidence 2 22 25667776643321 1 12333332222344589999999999999 88999999999999987
Q ss_pred CCCCCChHHHHHHHHHcCcEE------------EEecCCCChhhHHHHHHHHhhCC
Q 001947 307 RDYFNEEPFLRNMLEFYQGGV------------EMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 307 ~~~~~EQ~~NA~~le~~G~Gi------------~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.... =.+..++++.+..+-- .+-.++.+++.+...+.++++++
T Consensus 287 k~~~-lt~~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~~~ll~~~ 341 (373)
T PF02684_consen 287 KVSP-LTYFIAKRLVKVKYISLPNIIAGREVVPELIQEDATPENIAAELLELLENP 341 (373)
T ss_pred cCcH-HHHHHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHHHHHHHHHHhcCH
Confidence 5432 2245777776654421 11134567778888888887755
No 133
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.76 E-value=2e-06 Score=96.88 Aligned_cols=121 Identities=19% Similarity=0.091 Sum_probs=84.7
Q ss_pred CcEEEEEcCCCCCh---hhHHHh---hCC--CCcEEEEeCCCCCC-----------CCCCeEEcCCCCC--HHHHHhhcC
Q 001947 223 VKLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ-----------LPPNFIKLPKDAY--TPDFMAASD 281 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~---~~ll~~---l~~--~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~--~p~lL~aaD 281 (992)
.+.++++.|+.... ..+++. +.. .++.++++|..... +.+|+.+.++.++ +.++|..||
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~ad 280 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLREALEALAAELGLEDRVTFLGAVPHEEVPAYYAAAD 280 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchHHHHHHHHhcCCcceEEEeCCCCHHHHHHHHHhcC
Confidence 44567777776542 223332 322 36778888875431 3578999988753 568999999
Q ss_pred EEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 282 CMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 282 lvIt~----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
++|.. +..+++.||+++|+|+|+.+... ..+.+.+.+.|..++..+ .+.+.++|.++++++.
T Consensus 281 ~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~------~~~~~~~~~~g~~~~~~~--~~~l~~~i~~~~~~~~ 346 (377)
T cd03798 281 VFVLPSLREGFGLVLLEAMACGLPVVATDVGG------IPEIITDGENGLLVPPGD--PEALAEAILRLLADPW 346 (377)
T ss_pred eeecchhhccCChHHHHHHhcCCCEEEecCCC------hHHHhcCCcceeEECCCC--HHHHHHHHHHHhcCcH
Confidence 99953 34578999999999999876433 344567777788887665 5788999999987654
No 134
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.74 E-value=1e-06 Score=91.10 Aligned_cols=109 Identities=21% Similarity=0.326 Sum_probs=80.2
Q ss_pred HHHhCCCC--CCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhh
Q 001947 620 MTELGVRF--EDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASA 697 (992)
Q Consensus 620 ~~~~g~~~--~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~ 697 (992)
+.+.+++. ..|+++.+.|+||.|.|++||.|=.||++.|...++|.+++..+|+++|-.+| |+- .++
T Consensus 71 la~~~~~~~~~~~i~l~lqSsIPvgKG~ASSTADl~At~~A~A~~l~~~l~es~iakLcv~iE------PtD-----sii 139 (293)
T COG4542 71 LARWGVTKLINTGIDLLLQSSIPVGKGMASSTADLVATARATARFLGRELRESEIAKLCVSIE------PTD-----SII 139 (293)
T ss_pred HHHhCccceecCCeeEEEeccccccccccccHHHHHHHHHHHHHHhCCCCCHHHHHHHHhhcC------Ccc-----cee
Confidence 34555542 36899999999999999999999999999999999999999999999999999 322 233
Q ss_pred ccCcceEEEEeecCccceeeecCCCCeEEEEEeCCCccccCCCCCcc
Q 001947 698 CGEANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVGGADYGS 744 (992)
Q Consensus 698 ~Gg~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~~~~y~~ 744 (992)
|-+ ++++|.+...+.+...-++.+.+++++.+..-.| -+|+.
T Consensus 140 F~~---~tlFd~r~g~~~~~~g~~PpL~ilv~e~~~~v~T--~~y~q 181 (293)
T COG4542 140 FDK---ATLFDQREGRVIEFLGEMPPLHILVFEGKGTVET--VDYNQ 181 (293)
T ss_pred ccc---ceeehhccchHHHhcCCCCceEEEEEcCCCceee--eeccC
Confidence 444 4667766555433222235788888886654333 35664
No 135
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=98.73 E-value=2e-06 Score=100.09 Aligned_cols=81 Identities=11% Similarity=-0.069 Sum_probs=62.3
Q ss_pred CCeEEcCCCC--CHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCC
Q 001947 262 PNFIKLPKDA--YTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLL 335 (992)
Q Consensus 262 ~nv~v~~f~~--~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~ 335 (992)
++|++.++++ .++.+|+.||++|..+ | .+++.|||+||+|+|+...++.. +.+.....|..++..+
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~~g~~------e~i~~~~~G~lv~~~d-- 352 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDTAPVR------EVITDGENGLLVDFFD-- 352 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCCCCch------hhcccCCceEEcCCCC--
Confidence 5788889875 4678999999999643 2 24899999999999998754433 3355666788887665
Q ss_pred hhhHHHHHHHHhhCC
Q 001947 336 TGHWKPYLERAISLK 350 (992)
Q Consensus 336 ~~~l~~al~~ll~~~ 350 (992)
++.|.++|.++++++
T Consensus 353 ~~~la~~i~~ll~~~ 367 (396)
T cd03818 353 PDALAAAVIELLDDP 367 (396)
T ss_pred HHHHHHHHHHHHhCH
Confidence 588999999999765
No 136
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional
Probab=98.73 E-value=1.9e-07 Score=101.14 Aligned_cols=115 Identities=16% Similarity=0.146 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHH-hCCCCC---CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcccc
Q 001947 609 AAYVAGTILVLMTE-LGVRFE---DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIV 684 (992)
Q Consensus 609 ~nyv~~~i~~~~~~-~g~~~~---~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~ 684 (992)
.|.++.++..+.+. .+.... .|++|.|+++||.++|||||||-++|++.+++++++.+++++++.++|.++
T Consensus 61 ~NLv~kA~~~l~~~~~~~~~~~~~~gv~I~i~K~IP~gaGLGggSSdAAA~L~aln~l~~~~ls~~eL~~lA~~l----- 135 (257)
T PRK04181 61 ENIIYKAYQELKNKGFSNELIEFFKKKAIEVEKNIPTGAGLGGGSSDAATFLLMLNEILNLKLSLEELAEIGSKV----- 135 (257)
T ss_pred CcHHHHHHHHHHHhccccccccCCCceEEEEEeCCCCcCcccccHHHHHHHHHHHHHHhCCCcCHHHHHHHHHHh-----
Confidence 67887777765542 332111 489999999999999999999999999999999999999999999999763
Q ss_pred CCCCCccchhhhhcc-CcceEEEEeecCccceeeecCCCCeEEEEEeCCCccccC
Q 001947 685 GAPCGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 738 (992)
Q Consensus 685 G~~~G~~D~~~~~~G-g~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~ 738 (992)
| .|---+++| +. .+..... +..++++.+.. .+++++.++.-+|+
T Consensus 136 G-----aDvPffl~~~~~---a~~~G~G-e~l~~l~~~~~-~~~lv~P~~~vsT~ 180 (257)
T PRK04181 136 G-----ADVAFFISGYKS---ANVSGIG-EIVEEFEEEIL-NLEIFTPNIFCSTK 180 (257)
T ss_pred C-----CCccEEecCCce---EEEEeeC-CeeEECCCCCC-eEEEECCCCCcCHH
Confidence 3 365556666 42 2233333 22244432222 38888877766654
No 137
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=98.71 E-value=1.4e-06 Score=99.56 Aligned_cols=119 Identities=18% Similarity=0.076 Sum_probs=83.9
Q ss_pred cEEEEEcCCCCCh---hhHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhcCE
Q 001947 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASDC 282 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~---~~ll~~---l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aaDl 282 (992)
+.++++.|+.... ..++++ +. .+++.++++|..... +..++++.++++ .++++|..||+
T Consensus 188 ~~~i~~~G~~~~~K~~~~li~a~~~l~~~~~~~~l~ivG~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~l~~~~~~ad~ 267 (367)
T cd05844 188 PPRILFVGRFVEKKGPLLLLEAFARLARRVPEVRLVIIGDGPLLAALEALARALGLGGRVTFLGAQPHAEVRELMRRARI 267 (367)
T ss_pred CcEEEEEEeeccccChHHHHHHHHHHHHhCCCeEEEEEeCchHHHHHHHHHHHcCCCCeEEECCCCCHHHHHHHHHhCCE
Confidence 3456677766552 223333 22 246788888865311 357898998874 47799999999
Q ss_pred EEecC----------ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 283 MLGKI----------GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 283 vIt~~----------G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+|..+ -.+++.|||++|+|+|+.+..+ +.+.+.+.+.|..++..+ ++.|.++|.++++++
T Consensus 268 ~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~------~~e~i~~~~~g~~~~~~d--~~~l~~~i~~l~~~~ 337 (367)
T cd05844 268 FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG------IPEAVEDGETGLLVPEGD--VAALAAALGRLLADP 337 (367)
T ss_pred EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC------chhheecCCeeEEECCCC--HHHHHHHHHHHHcCH
Confidence 98633 2479999999999999987543 344567778898887655 478999999998754
No 138
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=98.69 E-value=9.4e-07 Score=98.18 Aligned_cols=317 Identities=20% Similarity=0.175 Sum_probs=178.8
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (992)
+| |.++|+-.|-+- .-.|.++|+++-.+|.|++-+.+.+.....++ .+.+.. .. .+.....+.++.
T Consensus 3 ki-~i~AGE~SGDll-Ga~LikaLk~~~~~~efvGvgG~~m~aeG~~s-l~~~~e----ls-------vmGf~EVL~~lp 68 (381)
T COG0763 3 KI-ALSAGEASGDLL-GAGLIKALKARYPDVEFVGVGGEKMEAEGLES-LFDMEE----LS-------VMGFVEVLGRLP 68 (381)
T ss_pred eE-EEEecccchhhH-HHHHHHHHHhhCCCeEEEEeccHHHHhccCcc-ccCHHH----HH-------HhhHHHHHHHHH
Confidence 44 347788777654 44788999988668888866543333332221 000000 00 111112223332
Q ss_pred HHhhccHHHhHHHHHHHHHcCCCcEEE-ECCCchHHHHHH---HcC--CcEEEE-ecCchhHHHHHHHhhhccchHHHHH
Q 001947 97 ETAVAPRKSILKDEVEWLNSIKADLVV-SDVVPVACRAAA---DAG--IRSVCV-TNFSWDFIYAEYVMAAGHHHRSIVW 169 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~~kPDlVV-sD~~~~a~~aA~---~~g--IP~v~i-s~~~~~~~~~~~~~~~~~~~~~i~~ 169 (992)
... ...++..+.+...+||++| .|.+-.....++ +.+ +|.|.+ +.-.|.. +... +.
T Consensus 69 ~ll-----k~~~~~~~~i~~~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAW--r~~R----------a~ 131 (381)
T COG0763 69 RLL-----KIRRELVRYILANKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAW--RPKR----------AV 131 (381)
T ss_pred HHH-----HHHHHHHHHHHhcCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeee--chhh----------HH
Confidence 221 1345566777899999999 687666666654 445 998876 4433420 1000 01
Q ss_pred HHHhhccccceee-ecCCCCCC-CCC-CceeecC--ccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCChh----h-
Q 001947 170 QIAEDYSHCEFLI-RLPGYCPM-PAF-RDVIDVP--LVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAGW----K- 238 (992)
Q Consensus 170 ~l~~~y~~~d~ll-~~~~~~~~-p~~-~~v~~vp--~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~----~- 238 (992)
.+... +|.++ -+|+.... ..+ .++++|| ..... ...+++.+|+.++++.+++++.+.-||..... +
T Consensus 132 ~i~~~---~D~lLailPFE~~~y~k~g~~~~yVGHpl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~ 208 (381)
T COG0763 132 KIAKY---VDHLLAILPFEPAFYDKFGLPCTYVGHPLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPP 208 (381)
T ss_pred HHHHH---hhHeeeecCCCHHHHHhcCCCeEEeCChhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHH
Confidence 11111 23233 23432110 000 1234443 32222 23467889999999999999999999987641 1
Q ss_pred HHH---hhC--CCCcEEEEeCCCCCC-------C--C---CCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCc
Q 001947 239 LKE---EYL--PSGWKCLVCGASDSQ-------L--P---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLP 301 (992)
Q Consensus 239 ll~---~l~--~~~~~~Vv~G~~~~~-------l--~---~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP 301 (992)
+.+ .+. .++.+++++-.+... + + .+..+.+. .-.+.|.+||+++..+| +.+.|++.+|+|
T Consensus 209 f~~a~~~l~~~~~~~~~vlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~a~~~aD~al~aSG-T~tLE~aL~g~P 285 (381)
T COG0763 209 FVQAAQELKARYPDLKFVLPLVNAKYRRIIEEALKWEVAGLSLILIDG--EKRKAFAAADAALAASG-TATLEAALAGTP 285 (381)
T ss_pred HHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHhhccccCceEEecCc--hHHHHHHHhhHHHHhcc-HHHHHHHHhCCC
Confidence 222 232 256677777544321 1 1 23333332 23489999999999999 789999999999
Q ss_pred EEEEeCCCCCChHHHHHHHHHcCcEE--------EE----ecCCCChhhHHHHHHHHhhCCCCcc------------CCC
Q 001947 302 FVFVRRDYFNEEPFLRNMLEFYQGGV--------EM----IRRDLLTGHWKPYLERAISLKPCYE------------GGI 357 (992)
Q Consensus 302 ~V~iP~~~~~EQ~~NA~~le~~G~Gi--------~v----~~~~~~~~~l~~al~~ll~~~~~~~------------~~~ 357 (992)
||+.-...... ...++++.+..+.- .+ -.++.+++.+..++.+++.+...+. -..
T Consensus 286 ~Vv~Yk~~~it-~~iak~lvk~~yisLpNIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~ 364 (381)
T COG0763 286 MVVAYKVKPIT-YFIAKRLVKLPYVSLPNILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLRE 364 (381)
T ss_pred EEEEEeccHHH-HHHHHHhccCCcccchHHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcC
Confidence 99987543322 34666666554431 11 1245678899999999998773211 233
Q ss_pred C-HHHHHHHHHHHHH
Q 001947 358 N-GGEVAAHILQETA 371 (992)
Q Consensus 358 ~-G~~~aA~~I~~~~ 371 (992)
+ ..+.+|+.|.+.+
T Consensus 365 ~~~~e~aA~~vl~~~ 379 (381)
T COG0763 365 DPASEIAAQAVLELL 379 (381)
T ss_pred CcHHHHHHHHHHHHh
Confidence 3 6677777777654
No 139
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.68 E-value=4.1e-06 Score=95.05 Aligned_cols=120 Identities=14% Similarity=0.034 Sum_probs=83.5
Q ss_pred CcEEEEEcCCCCCh--h-hHHHhhCC-CCcEEEEeCCCCCC-----------CCCCeEEcCCCCC--HHHHHhhcCEEEe
Q 001947 223 VKLLILNFGGQPAG--W-KLKEEYLP-SGWKCLVCGASDSQ-----------LPPNFIKLPKDAY--TPDFMAASDCMLG 285 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~~l~~-~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~--~p~lL~aaDlvIt 285 (992)
.+.++++.|+.... . .+++.+.. .++.++++|..... +.+||.+.|+++. ++++++.||++|.
T Consensus 190 ~~~~i~~~G~~~~~K~~~~li~a~~~l~~~~l~i~G~g~~~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~ad~~i~ 269 (357)
T cd03795 190 GRPFFLFVGRLVYYKGLDVLLEAAAALPDAPLVIVGEGPLEAELEALAAALGLLDRVRFLGRLDDEEKAALLAACDVFVF 269 (357)
T ss_pred CCcEEEEecccccccCHHHHHHHHHhccCcEEEEEeCChhHHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhCCEEEe
Confidence 34566788876552 2 23333211 16788888865421 3578999999864 5689999999994
Q ss_pred c------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 286 K------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 286 ~------~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~-~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
. +...++.||+++|+|+|+.+.+...|. +.. .+.|..++..+ .+.|.++|.++++++
T Consensus 270 ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~------i~~~~~~g~~~~~~d--~~~~~~~i~~l~~~~ 333 (357)
T cd03795 270 PSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSY------VNLHGVTGLVVPPGD--PAALAEAIRRLLEDP 333 (357)
T ss_pred CCcccccccchHHHHHHHcCCCEEecCCCCchhH------HhhCCCceEEeCCCC--HHHHHHHHHHHHHCH
Confidence 3 223589999999999999875544433 444 67888887655 578999999999865
No 140
>PRK00654 glgA glycogen synthase; Provisional
Probab=98.65 E-value=3.1e-06 Score=100.72 Aligned_cols=137 Identities=18% Similarity=0.132 Sum_probs=88.3
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hCCCCcEEEEeCCCCC---C--------CCCCeEE-cCCCC
Q 001947 210 RKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YLPSGWKCLVCGASDS---Q--------LPPNFIK-LPKDA 271 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~~~~~~~Vv~G~~~~---~--------l~~nv~v-~~f~~ 271 (992)
+.++++.++++++...++++.|..... . .++++ +...++++++.|.... + ++.++.+ .+|..
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lvivG~g~~~~~~~l~~l~~~~~~~v~~~~g~~~ 347 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLLGTGDPELEEAFRALAARYPGKVGVQIGYDE 347 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEEecCcHHHHHHHHHHHHHCCCcEEEEEeCCH
Confidence 346788899875444566777876653 2 23332 3334678888886532 1 3556653 56654
Q ss_pred C-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 001947 272 Y-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (992)
Q Consensus 272 ~-~p~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~l 346 (992)
. ++.+|++||++|..+ |+ .+.+|||++|+|+|+....+..|.-.+...-...+.|..++..+ ++.+.++|.++
T Consensus 348 ~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d--~~~la~~i~~~ 425 (466)
T PRK00654 348 ALAHRIYAGADMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFN--AEDLLRALRRA 425 (466)
T ss_pred HHHHHHHhhCCEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCC--HHHHHHHHHHH
Confidence 4 357899999999743 32 58999999999999987655555311100001227798888665 57888899888
Q ss_pred hh
Q 001947 347 IS 348 (992)
Q Consensus 347 l~ 348 (992)
++
T Consensus 426 l~ 427 (466)
T PRK00654 426 LE 427 (466)
T ss_pred HH
Confidence 75
No 141
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=98.64 E-value=7.8e-06 Score=96.62 Aligned_cols=82 Identities=17% Similarity=0.076 Sum_probs=62.3
Q ss_pred CCCeEEcCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe
Q 001947 261 PPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (992)
Q Consensus 261 ~~nv~v~~f~--~~~p~lL~aa----DlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~ 330 (992)
..+|++.++. ++++++|+.| |++|..+ | ..++.|||++|+|+|+....+.. +.+.+...|..++
T Consensus 316 ~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~------eiv~~~~~G~lv~ 389 (439)
T TIGR02472 316 YGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPR------DIIANCRNGLLVD 389 (439)
T ss_pred CceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcH------HHhcCCCcEEEeC
Confidence 4567777764 4678899876 9999654 3 35999999999999998754433 3456666798888
Q ss_pred cCCCChhhHHHHHHHHhhCC
Q 001947 331 RRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 331 ~~~~~~~~l~~al~~ll~~~ 350 (992)
..+ ++.|.++|.++++++
T Consensus 390 ~~d--~~~la~~i~~ll~~~ 407 (439)
T TIGR02472 390 VLD--LEAIASALEDALSDS 407 (439)
T ss_pred CCC--HHHHHHHHHHHHhCH
Confidence 766 578999999998765
No 142
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=98.64 E-value=6.4e-06 Score=93.45 Aligned_cols=118 Identities=18% Similarity=0.202 Sum_probs=81.2
Q ss_pred cEEEEEcCCCCCh---hhHHHh---hC--CCCcEEEEeCCCCCC----------------CCCCeEEcCC-CC--CHHHH
Q 001947 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ----------------LPPNFIKLPK-DA--YTPDF 276 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~---~~ll~~---l~--~~~~~~Vv~G~~~~~----------------l~~nv~v~~f-~~--~~p~l 276 (992)
+.+++++|+.... ..+++. +. .+++.++++|..... +.+++.+++. .+ .++++
T Consensus 185 ~~~i~~~G~~~~~K~~~~ll~a~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~~~ 264 (366)
T cd03822 185 RPVLLTFGLLRPYKGLELLLEALPLLVAKHPDVRLLVAGETHPDLERYRGEAYALAERLGLADRVIFINRYLPDEELPEL 264 (366)
T ss_pred CeEEEEEeeccCCCCHHHHHHHHHHHHhhCCCeEEEEeccCccchhhhhhhhHhHHHhcCCCCcEEEecCcCCHHHHHHH
Confidence 4566677766542 233332 22 256788888864321 3467887754 43 46789
Q ss_pred HhhcCEEEec------CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 277 MAASDCMLGK------IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 277 L~aaDlvIt~------~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
|+.||++|.. +..++++|||++|+|+|+.+.+. .++ +...+.|..+...+ .+.+.++|.++++++
T Consensus 265 ~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~------i~~~~~g~~~~~~d--~~~~~~~l~~l~~~~ 335 (366)
T cd03822 265 FSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEE------VLDGGTGLLVPPGD--PAALAEAIRRLLADP 335 (366)
T ss_pred HhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hhe------eeeCCCcEEEcCCC--HHHHHHHHHHHHcCh
Confidence 9999999953 23458999999999999987654 443 56677888887665 578999999998764
No 143
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.62 E-value=2e-06 Score=101.66 Aligned_cols=293 Identities=13% Similarity=0.109 Sum_probs=155.1
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhh
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAV 100 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 100 (992)
.++|+-.|-+. +..|+++|+++..++.+.+-+.+.+.....+. . .+. .+--.+....-+.++...
T Consensus 231 I~AGE~SGDlh-gA~Li~aLk~~~P~i~~~GvGG~~M~aaG~e~---l-----~d~----~eLsVmG~~EVL~~l~~l-- 295 (608)
T PRK01021 231 ISAGEHSGDTL-GGNLLKEIKALYPDIHCFGVGGPQMRAEGFHP---L-----FNM----EEFQVSGFWEVLLALFKL-- 295 (608)
T ss_pred EEeccccHHHH-HHHHHHHHHhcCCCcEEEEEccHHHHhCcCcc---c-----CCh----HHhhhhhHHHHHHHHHHH--
Confidence 46777777554 34677888888778877654432222222210 0 000 000001111222233222
Q ss_pred ccHHHhHHHHHHHHHcCCCcEEE-ECCCchHHHHH---HHcCC--cEEEE-ecCchhHHHHHHHhhhccchHHHHHHHHh
Q 001947 101 APRKSILKDEVEWLNSIKADLVV-SDVVPVACRAA---ADAGI--RSVCV-TNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (992)
Q Consensus 101 ~~~~~~l~~~~~~L~~~kPDlVV-sD~~~~a~~aA---~~~gI--P~v~i-s~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 173 (992)
.+..++..+.+++.+||+|| .|++-.....| ++.|+ |++.+ +.-.|.. +.. . ++.+.+
T Consensus 296 ---~~~~~~l~~~i~~~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAW--R~~------R----ikki~k 360 (608)
T PRK01021 296 ---WYRYRKLYKTILKTNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAW--RPK------R----KTILEK 360 (608)
T ss_pred ---HHHHHHHHHHHHhcCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceee--Ccc------h----HHHHHH
Confidence 23456667888899999999 58765555444 55685 98876 4433420 000 0 111111
Q ss_pred hcccccee-eecCCCCCC--CCCCce--eecCccccc-CCCChHHHHHHhCCCCCCcEEEEEcCCCCCh----hh-HHHh
Q 001947 174 DYSHCEFL-IRLPGYCPM--PAFRDV--IDVPLVVRR-LHKSRKEVRKELGIEDDVKLLILNFGGQPAG----WK-LKEE 242 (992)
Q Consensus 174 ~y~~~d~l-l~~~~~~~~--p~~~~v--~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~----~~-ll~~ 242 (992)
. .|.+ .-+|++.+. ..-.++ .+-|..... ...++.++++.++++++.++|.+.-||.... .+ ++++
T Consensus 361 ~---vD~ll~IfPFE~~~y~~~gv~v~yVGHPL~d~i~~~~~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~a 437 (608)
T PRK01021 361 Y---LDLLLLILPFEQNLFKDSPLRTVYLGHPLVETISSFSPNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQA 437 (608)
T ss_pred H---hhhheecCccCHHHHHhcCCCeEEECCcHHhhcccCCCHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHH
Confidence 1 1111 123332110 000122 333443332 2345677889999988889999999987653 11 2221
Q ss_pred ----hCCCCcEEEEeCCCCC--C-----C-C---CCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 001947 243 ----YLPSGWKCLVCGASDS--Q-----L-P---PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 243 ----l~~~~~~~Vv~G~~~~--~-----l-~---~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~ 307 (992)
....+.++++...+.. + + . .++.++.- ..-.++|++||++++.+| +.+.|++.+|+|||++-.
T Consensus 438 a~~~~l~~~l~fvvp~a~~~~~~~i~~~~~~~~~~~~~ii~~-~~~~~~m~aaD~aLaaSG-TaTLEaAL~g~PmVV~YK 515 (608)
T PRK01021 438 FLASSLASTHQLLVSSANPKYDHLILEVLQQEGCLHSHIVPS-QFRYELMRECDCALAKCG-TIVLETALNQTPTIVTCQ 515 (608)
T ss_pred HHHHHhccCeEEEEecCchhhHHHHHHHHhhcCCCCeEEecC-cchHHHHHhcCeeeecCC-HHHHHHHHhCCCEEEEEe
Confidence 1123456666533221 1 2 1 12344321 123589999999999999 789999999999999865
Q ss_pred CCCCChHHHHHHHHHc---CcE-------E-----EEe-cCCCChhhHHHHHHHHhhCC
Q 001947 308 DYFNEEPFLRNMLEFY---QGG-------V-----EMI-RRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 308 ~~~~EQ~~NA~~le~~---G~G-------i-----~v~-~~~~~~~~l~~al~~ll~~~ 350 (992)
...- -...++++.+. -+| . .+. .++.+++.+.+.+ +++.++
T Consensus 516 ~s~L-ty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~ 572 (608)
T PRK01021 516 LRPF-DTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTS 572 (608)
T ss_pred cCHH-HHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCH
Confidence 4322 23466777661 111 1 121 3456778888776 666554
No 144
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism]
Probab=98.60 E-value=3.7e-06 Score=87.91 Aligned_cols=92 Identities=21% Similarity=0.255 Sum_probs=61.6
Q ss_pred CCCCchHHHHHHHHH--HHHHHHhCCCCCH-HHHHHHHHHHhccccC-CCCCccchhhhhccCcceEEEEeecCccc---
Q 001947 642 GKGVSSSASVEVASM--SAIAAAHGLNIHP-RDLALLCQKVENHIVG-APCGVMDQMASACGEANKLLAMVCQPAEL--- 714 (992)
Q Consensus 642 g~GLgSSAA~~va~~--~al~~~~~~~l~~-~el~~la~~~E~~~~G-~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~--- 714 (992)
..|||||||+++.+. +.|....+-+++. .++-++||.+-..-+| ..|| -|-++++||+ +++=.+.|.-.
T Consensus 107 KtGlGSSAa~~tsLt~~lfls~~~~~nvd~k~eIhklaqiAhc~aQggIGSG-fDiaaA~fGs---iiyrRF~p~li~~l 182 (337)
T COG3890 107 KTGLGSSAAVATSLTCGLFLSHANATNVDEKGEIHKLAQIAHCYAQGGIGSG-FDIAAAIFGS---IIYRRFEPGLIPKL 182 (337)
T ss_pred cCCCcchhHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHhCCCCcc-chhhHhhhcc---eEEeecCcchhhhh
Confidence 689999999999998 3333334556666 7889999987765554 5566 6999999999 34423333321
Q ss_pred --eeeecCCCCeEEEEEeCCCccccC
Q 001947 715 --LGVVEIPSHIRFWGIDSGIRHSVG 738 (992)
Q Consensus 715 --~~~v~~p~~~~~vl~dsgi~~~~~ 738 (992)
.+.+.+ .++.++..|.+...+|.
T Consensus 183 ~qig~~nf-g~y~LmmGd~a~gSeTv 207 (337)
T COG3890 183 RQIGAVNF-GDYYLMMGDQAIGSETV 207 (337)
T ss_pred HhhCcccc-cCeeeeecccccCccch
Confidence 122233 36788888877766654
No 145
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=98.59 E-value=5.1e-06 Score=97.06 Aligned_cols=120 Identities=15% Similarity=0.063 Sum_probs=86.0
Q ss_pred CcEEEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhcC
Q 001947 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASD 281 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aaD 281 (992)
.++.+++.|..... . .++++ +. ..++.+++.|.+... +.+++.+.|+.+ +++++|+.||
T Consensus 221 ~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~~~~~~l~ivG~G~~~~~l~~~~~~~~l~~~V~~~G~~~~~el~~~l~~aD 300 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHVAIEACRQLKEQGVAFRYRILGIGPWERRLRTLIEQYQLEDVVEMPGFKPSHEVKAMLDDAD 300 (406)
T ss_pred CCeEEEEEeCcchhcCHHHHHHHHHHHHhhCCCEEEEEEECchhHHHHHHHHHHcCCCCeEEEeCCCCHHHHHHHHHhCC
Confidence 45667788877653 2 23443 22 246788888865421 457799999875 5678999999
Q ss_pred EEEecC---------Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhh-CC
Q 001947 282 CMLGKI---------GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAIS-LK 350 (992)
Q Consensus 282 lvIt~~---------G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~-~~ 350 (992)
++|..+ |+ ++++|||++|+|+|+....+..|. +++...|..++..+ ++.|.++|.++++ ++
T Consensus 301 v~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~------v~~~~~G~lv~~~d--~~~la~ai~~l~~~d~ 372 (406)
T PRK15427 301 VFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPEL------VEADKSGWLVPEND--AQALAQRLAAFSQLDT 372 (406)
T ss_pred EEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhh------hcCCCceEEeCCCC--HHHHHHHHHHHHhCCH
Confidence 999632 33 579999999999999876554443 66667898887665 5789999999987 55
No 146
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=98.58 E-value=1.2e-05 Score=94.79 Aligned_cols=210 Identities=12% Similarity=0.021 Sum_probs=118.0
Q ss_pred HhHHHHHHHHHcCCCcEEEECCC---chHHHHHHHcCCcEEEEe-cCchh----HHH-HHHHhhhc-----cc--h----
Q 001947 105 SILKDEVEWLNSIKADLVVSDVV---PVACRAAADAGIRSVCVT-NFSWD----FIY-AEYVMAAG-----HH--H---- 164 (992)
Q Consensus 105 ~~l~~~~~~L~~~kPDlVVsD~~---~~a~~aA~~~gIP~v~is-~~~~~----~~~-~~~~~~~~-----~~--~---- 164 (992)
..+.....++++.+||+|++... ..+.++|...|+|++..+ +..+. ... ..|..... .. +
T Consensus 267 ~~~~~l~~~ir~~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~~~~e~~~~~~a~~i~~~sd~v~~s 346 (578)
T PRK15490 267 YGIKHLVPHLCERKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRLFKPEYEPLYQALAVVPGVDFMSNN 346 (578)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhHHHHHHHHhhhhceeEecchhhhcc
Confidence 34566788999999999998752 356778889999997653 21110 000 00000000 00 0
Q ss_pred HHHHHHHHhhccccceeeecCCCCCCCCCCceeecCcccccCCC---ChHHHHHH--hCCCCCCcEEEEEcCCCCCh---
Q 001947 165 RSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVRRLHK---SRKEVRKE--LGIEDDVKLLILNFGGQPAG--- 236 (992)
Q Consensus 165 ~~i~~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~~~~~---~r~e~r~~--l~~~~d~~~Vlvs~Gg~~~~--- 236 (992)
..+.+.+.+.+. .| +....+++.|+....... .+...++. .+++++.+ ++.+.|.....
T Consensus 347 ~~v~~~l~~~lg-------ip-----~~KI~VIyNGVD~~rf~p~~~~~~~~r~~~~~~l~~~~~-vIg~VgRl~~~Kg~ 413 (578)
T PRK15490 347 HCVTRHYADWLK-------LE-----AKHFQVVYNGVLPPSTEPSSEVPHKIWQQFTQKTQDADT-TIGGVFRFVGDKNP 413 (578)
T ss_pred HHHHHHHHHHhC-------CC-----HHHEEEEeCCcchhhcCccchhhHHHHHHhhhccCCCCc-EEEEEEEEehhcCH
Confidence 001111111110 10 112234455543321111 11123332 23333443 44555544331
Q ss_pred hhHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEEEecC---C-hhHHHHHH
Q 001947 237 WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCMLGKI---G-YGTVSEAL 296 (992)
Q Consensus 237 ~~ll~~---l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlvIt~~---G-~~Tv~Eal 296 (992)
..+++. +. .+++.+++.|.+... +.++|++.++.++++++|+.+|++|..+ | .+++.|||
T Consensus 414 ~~LI~A~a~llk~~pdirLvIVGdG~~~eeLk~la~elgL~d~V~FlG~~~Dv~~~LaaADVfVlPS~~EGfp~vlLEAM 493 (578)
T PRK15490 414 FAWIDFAARYLQHHPATRFVLVGDGDLRAEAQKRAEQLGILERILFVGASRDVGYWLQKMNVFILFSRYEGLPNVLIEAQ 493 (578)
T ss_pred HHHHHHHHHHHhHCCCeEEEEEeCchhHHHHHHHHHHcCCCCcEEECCChhhHHHHHHhCCEEEEcccccCccHHHHHHH
Confidence 233332 21 256788888865421 3578999999989999999999999642 3 46999999
Q ss_pred HcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCC
Q 001947 297 AYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD 333 (992)
Q Consensus 297 ~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~ 333 (992)
++|+|+|+....+. .+.+.+...|..++..+
T Consensus 494 A~GlPVVATdvGG~------~EiV~dG~nG~LVp~~D 524 (578)
T PRK15490 494 MVGVPVISTPAGGS------AECFIEGVSGFILDDAQ 524 (578)
T ss_pred HhCCCEEEeCCCCc------HHHcccCCcEEEECCCC
Confidence 99999999875443 34467778899998765
No 147
>PLN02407 diphosphomevalonate decarboxylase
Probab=98.49 E-value=1.2e-05 Score=89.09 Aligned_cols=60 Identities=23% Similarity=0.303 Sum_probs=52.4
Q ss_pred EEEEEe--CCCCCCCCchHHHHHHHHHHHHHHHhCCCCC-HHHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 632 SMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIH-PRDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 632 ~i~i~s--~iP~g~GLgSSAA~~va~~~al~~~~~~~l~-~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
++.|.| ++|.++||+||||..+|++.|+..+++++++ ..+|..+|. +| || .|.- ++|||+
T Consensus 105 ~~~I~S~N~~PtaaGLaSSAs~~aAl~~al~~~~~~~~~~~~~ls~lAr------~G--SG-Sa~r-S~~Gg~ 167 (343)
T PLN02407 105 HVHIASYNNFPTAAGLASSAAGFACLVFALAKLMNVKEDFPGELSAIAR------QG--SG-SACR-SLYGGF 167 (343)
T ss_pred cEEEEeccCCccccchHHHHHHHHHHHHHHHHHhCCCCCchHHHHHHHh------cc--Ch-HHHH-HhhCCe
Confidence 566666 9999999999999999999999999999999 999999998 45 55 3555 999995
No 148
>PLN02846 digalactosyldiacylglycerol synthase
Probab=98.48 E-value=1.8e-05 Score=92.68 Aligned_cols=113 Identities=13% Similarity=0.048 Sum_probs=74.0
Q ss_pred EEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCCC---------CCCCeE-EcCCCCCHHHHHhhcCEEEecC
Q 001947 226 LILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDSQ---------LPPNFI-KLPKDAYTPDFMAASDCMLGKI 287 (992)
Q Consensus 226 Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~~---------l~~nv~-v~~f~~~~p~lL~aaDlvIt~~ 287 (992)
++++.|..... . .++++ +. .+++++++.|.+... ++-+++ +.++ ....++++.+|+||..+
T Consensus 230 ~~l~vGRL~~eK~~~~Li~a~~~l~~~~~~~~l~ivGdGp~~~~L~~~a~~l~l~~~vf~G~-~~~~~~~~~~DvFv~pS 308 (462)
T PLN02846 230 GAYYIGKMVWSKGYKELLKLLHKHQKELSGLEVDLYGSGEDSDEVKAAAEKLELDVRVYPGR-DHADPLFHDYKVFLNPS 308 (462)
T ss_pred EEEEEecCcccCCHHHHHHHHHHHHhhCCCeEEEEECCCccHHHHHHHHHhcCCcEEEECCC-CCHHHHHHhCCEEEECC
Confidence 56778877663 2 33333 22 246788888877542 222333 3444 34457999999999754
Q ss_pred ----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 288 ----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 288 ----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
-.+++.|||++|+|+|+...+. . ..+.+.+.|...+ +.+.+.+++.++++++
T Consensus 309 ~~Et~g~v~lEAmA~G~PVVa~~~~~-~------~~v~~~~ng~~~~----~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 309 TTDVVCTTTAEALAMGKIVVCANHPS-N------EFFKQFPNCRTYD----DGKGFVRATLKALAEE 364 (462)
T ss_pred CcccchHHHHHHHHcCCcEEEecCCC-c------ceeecCCceEecC----CHHHHHHHHHHHHccC
Confidence 3468999999999999987543 2 3355566665553 2578888999988743
No 149
>PRK10125 putative glycosyl transferase; Provisional
Probab=98.47 E-value=1.4e-05 Score=93.32 Aligned_cols=96 Identities=16% Similarity=0.123 Sum_probs=66.0
Q ss_pred hHHHhh--CCCCcEEEEeCCCCCCCCCCeEEcCCCCC---HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCC
Q 001947 238 KLKEEY--LPSGWKCLVCGASDSQLPPNFIKLPKDAY---TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 238 ~ll~~l--~~~~~~~Vv~G~~~~~l~~nv~v~~f~~~---~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
.+++++ ...++.+++.|...+..++++..+++..+ +.++|++||++|..+ -.++++|||+||+|+|+.+..
T Consensus 260 ~li~A~~~l~~~~~L~ivG~g~~~~~~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~G~PVVat~~g 339 (405)
T PRK10125 260 QLVREMMALGDKIELHTFGKFSPFTAGNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSIGVPVIATHSD 339 (405)
T ss_pred HHHHHHHhCCCCeEEEEEcCCCcccccceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHcCCCEEEeCCC
Confidence 345543 23567888888754444567877887644 567899999999754 235899999999999999865
Q ss_pred CCCChHHHHHHHHHcCcEEEEecCCCChhhHHHH
Q 001947 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPY 342 (992)
Q Consensus 309 ~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~a 342 (992)
+..| .+. .+.|..++..+. +.|...
T Consensus 340 G~~E------iv~-~~~G~lv~~~d~--~~La~~ 364 (405)
T PRK10125 340 AARE------VLQ-KSGGKTVSEEEV--LQLAQL 364 (405)
T ss_pred ChHH------hEe-CCcEEEECCCCH--HHHHhc
Confidence 5433 233 357999987763 455543
No 150
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.47 E-value=1.3e-06 Score=83.60 Aligned_cols=111 Identities=15% Similarity=0.150 Sum_probs=82.6
Q ss_pred cEEEEEcCCCCCh--------hhHHHhhCCCCc-EEE-EeCCCCC---C----C--CCCeE--EcCCCCCHHHHHhhcCE
Q 001947 224 KLLILNFGGQPAG--------WKLKEEYLPSGW-KCL-VCGASDS---Q----L--PPNFI--KLPKDAYTPDFMAASDC 282 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~--------~~ll~~l~~~~~-~~V-v~G~~~~---~----l--~~nv~--v~~f~~~~p~lL~aaDl 282 (992)
..++|+.|+..+. .+++++|...++ +++ -.|++.. + . ...+. .+.|.+.+.++++.||+
T Consensus 4 ~~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~Adl 83 (170)
T KOG3349|consen 4 MTVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQPFFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRSADL 83 (170)
T ss_pred eEEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCccCCCCHHHhhcccCCeEEEEEecCccHHHHHhhccE
Confidence 4689999987764 133444544555 333 4576632 1 1 22333 45667788899999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCC--CCCChHHHHHHHHHcCcEEEEecCCC
Q 001947 283 MLGKIGYGTVSEALAYKLPFVFVRRD--YFNEEPFLRNMLEFYQGGVEMIRRDL 334 (992)
Q Consensus 283 vIt~~G~~Tv~Eal~~GvP~V~iP~~--~~~EQ~~NA~~le~~G~Gi~v~~~~~ 334 (992)
||+|+|.||++|.|..|+|.|+++.. ..+.|...|..|.+.|+-..+...++
T Consensus 84 VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~egyL~~C~ps~L 137 (170)
T KOG3349|consen 84 VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAEEGYLYYCTPSTL 137 (170)
T ss_pred EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHhcCcEEEeeccch
Confidence 99999999999999999999999865 24568889999999999999987664
No 151
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=98.47 E-value=2.4e-05 Score=90.59 Aligned_cols=132 Identities=15% Similarity=0.155 Sum_probs=89.9
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hC--CCCcEEEEeCCCCC------------------CCCCC
Q 001947 210 RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDS------------------QLPPN 263 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~--~~~~~~Vv~G~~~~------------------~l~~n 263 (992)
+...++.++++++. .++++.|..... ..++++ +. .+++.+++.|.... .+..+
T Consensus 180 ~~~~~~~~~~~~~~-~~il~~Grl~~~Kg~~~Li~A~~~l~~~~p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l~~~ 258 (380)
T PRK15484 180 QPNLRQQLNISPDE-TVLLYAGRISPDKGILLLMQAFEKLATAHSNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRIGDR 258 (380)
T ss_pred hHHHHHHhCCCCCC-eEEEEeccCccccCHHHHHHHHHHHHHhCCCeEEEEEeCCccccccchhHHHHHHHHHHHhcCCc
Confidence 34556777876555 456667776652 234443 22 35678888875321 13567
Q ss_pred eEEcCCCC--CHHHHHhhcCEEEecCC-----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE-ecCCCC
Q 001947 264 FIKLPKDA--YTPDFMAASDCMLGKIG-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM-IRRDLL 335 (992)
Q Consensus 264 v~v~~f~~--~~p~lL~aaDlvIt~~G-----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v-~~~~~~ 335 (992)
+.+.++.+ .++++|++||++|..+. ..++.|||++|+|+|+....+.. +.+++...|..+ +..+
T Consensus 259 v~~~G~~~~~~l~~~~~~aDv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~------Eiv~~~~~G~~l~~~~d-- 330 (380)
T PRK15484 259 CIMLGGQPPEKMHNYYPLADLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGIT------EFVLEGITGYHLAEPMT-- 330 (380)
T ss_pred EEEeCCCCHHHHHHHHHhCCEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcH------hhcccCCceEEEeCCCC--
Confidence 88888874 57799999999997443 25789999999999998764433 346666678755 3333
Q ss_pred hhhHHHHHHHHhhCC
Q 001947 336 TGHWKPYLERAISLK 350 (992)
Q Consensus 336 ~~~l~~al~~ll~~~ 350 (992)
++.|.++|.++++++
T Consensus 331 ~~~la~~I~~ll~d~ 345 (380)
T PRK15484 331 SDSIISDINRTLADP 345 (380)
T ss_pred HHHHHHHHHHHHcCH
Confidence 689999999999765
No 152
>PRK05905 hypothetical protein; Provisional
Probab=98.47 E-value=2.5e-06 Score=92.10 Aligned_cols=112 Identities=15% Similarity=0.146 Sum_probs=82.8
Q ss_pred HHHHH-HHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCC
Q 001947 609 AAYVA-GTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAP 687 (992)
Q Consensus 609 ~nyv~-~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~ 687 (992)
.|.++ .++..+.+..+.. +|++|.+..+||.++||||+||=.+|++.+|+++++ ++.+++.+++.++ |
T Consensus 66 ~nli~~ka~~~l~~~~~~~--~~~~i~l~K~IP~~aGLGggSSDAAa~L~~Ln~l~~--ls~~~L~~ia~~l-----G-- 134 (258)
T PRK05905 66 SRLILVKTLEWLRDKYNIK--NHFKIKIKKRIPIGSGLGSGSSNAAVLMKWILEFEG--INEINYKDVVNKL-----G-- 134 (258)
T ss_pred cchHHHHHHHHHHHHhCCC--CCeEEEEEeCCCCcCCCCCCchHHHHHHHHHHHHhC--CCHHHHHHHHHHh-----C--
Confidence 66776 7788777667754 589999999999999999999999999999999997 6889999988753 3
Q ss_pred CCccchhhhhcc-CcceEEEEeecCccceeeecCCCCeEEEEEeCCCccccC
Q 001947 688 CGVMDQMASACG-EANKLLAMVCQPAELLGVVEIPSHIRFWGIDSGIRHSVG 738 (992)
Q Consensus 688 ~G~~D~~~~~~G-g~~~~~~~~~~~~~~~~~v~~p~~~~~vl~dsgi~~~~~ 738 (992)
.|---+++| +. .+..... +..++++.+....+++++.++.-+|+
T Consensus 135 ---ADVPFfl~g~~~---a~~~G~G-E~l~pl~~~~~~~~vlv~P~~~vST~ 179 (258)
T PRK05905 135 ---SDIPFFLSGYKT---AYISDYG-SQVEDLIGQFKLTYKVIFMNVNVSTK 179 (258)
T ss_pred ---CCcceEEeCCcc---EEEEeeC-ceeEECCCCCCceEEEECCCCCCCHH
Confidence 365566777 53 2233333 23355554444568888877766664
No 153
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=98.46 E-value=2.1e-05 Score=90.98 Aligned_cols=135 Identities=13% Similarity=0.098 Sum_probs=85.9
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHhh--CCCCcEEEEeCCCC--CC-----------C---CCCeEEc
Q 001947 209 SRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASD--SQ-----------L---PPNFIKL 267 (992)
Q Consensus 209 ~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~l--~~~~~~~Vv~G~~~--~~-----------l---~~nv~v~ 267 (992)
.+..+++.++++++++ ++++.|..... ..+++++ ...++.++++|... .. + ..++..+
T Consensus 187 ~~~~~~~~~~~~~~~~-~i~~~Grl~~~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~~~~~~~~~~~~~~~~~~~~v~~~ 265 (388)
T TIGR02149 187 DGNVVLDRYGIDRSRP-YILFVGRITRQKGVPHLLDAVHYIPKDVQVVLCAGAPDTPEVAEEVRQAVALLDRNRTGIIWI 265 (388)
T ss_pred chHHHHHHhCCCCCce-EEEEEcccccccCHHHHHHHHHHHhhcCcEEEEeCCCCcHHHHHHHHHHHHHhccccCceEEe
Confidence 3456677888866665 45667776552 2344432 23456666654322 11 1 1245554
Q ss_pred -CCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCCh----
Q 001947 268 -PKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT---- 336 (992)
Q Consensus 268 -~f~~--~~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~---- 336 (992)
++.+ +++++|++||++|..+ ...++.||+++|+|+|+.+..+ +.+.++....|..++..+...
T Consensus 266 ~~~~~~~~~~~~~~~aDv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~------~~e~i~~~~~G~~~~~~~~~~~~~~ 339 (388)
T TIGR02149 266 NKMLPKEELVELLSNAEVFVCPSIYEPLGIVNLEAMACGTPVVASATGG------IPEVVVDGETGFLVPPDNSDADGFQ 339 (388)
T ss_pred cCCCCHHHHHHHHHhCCEEEeCCccCCCChHHHHHHHcCCCEEEeCCCC------HHHHhhCCCceEEcCCCCCcccchH
Confidence 4443 4678999999999743 2357899999999999987543 234566677899987765322
Q ss_pred hhHHHHHHHHhhCC
Q 001947 337 GHWKPYLERAISLK 350 (992)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (992)
+.|.++|.++++++
T Consensus 340 ~~l~~~i~~l~~~~ 353 (388)
T TIGR02149 340 AELAKAINILLADP 353 (388)
T ss_pred HHHHHHHHHHHhCH
Confidence 67888888888755
No 154
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=98.45 E-value=2.5e-05 Score=93.21 Aligned_cols=131 Identities=21% Similarity=0.154 Sum_probs=87.5
Q ss_pred hHHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-HHHh---hCCCCcEEEEeCCCCCC-----------CCCCeEEcC-CC
Q 001947 210 RKEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDSQ-----------LPPNFIKLP-KD 270 (992)
Q Consensus 210 r~e~r~~l~~~~d-~~~Vlvs~Gg~~~~--~~-ll~~---l~~~~~~~Vv~G~~~~~-----------l~~nv~v~~-f~ 270 (992)
+..+++.++++.+ ...++++.|..... .. +++. +...++++++.|...+. .+.++.+.. +.
T Consensus 276 k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~l~~~~~~~~~~v~~~~~~~ 355 (473)
T TIGR02095 276 KEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELGGQLVVLGTGDPELEEALRELAERYPGNVRVIIGYD 355 (473)
T ss_pred HHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcCcEEEEECCCCHHHHHHHHHHHHHCCCcEEEEEcCC
Confidence 3467888898752 33456677777652 22 3332 33345788888876421 356676543 33
Q ss_pred CC-HHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc------CcEEEEecCCCChhhH
Q 001947 271 AY-TPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHW 339 (992)
Q Consensus 271 ~~-~p~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~------G~Gi~v~~~~~~~~~l 339 (992)
.. ++.++++||++|..+ |+ .+++|||++|+|+|+....+..|. +.+. +.|..++..+ ++.+
T Consensus 356 ~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~------v~~~~~~~~~~~G~l~~~~d--~~~l 427 (473)
T TIGR02095 356 EALAHLIYAGADFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT------VVDGDPEAESGTGFLFEEYD--PGAL 427 (473)
T ss_pred HHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccce------EecCCCCCCCCceEEeCCCC--HHHH
Confidence 32 457999999999754 32 488999999999999876655554 4443 7898887655 5788
Q ss_pred HHHHHHHhh
Q 001947 340 KPYLERAIS 348 (992)
Q Consensus 340 ~~al~~ll~ 348 (992)
..+|.+++.
T Consensus 428 a~~i~~~l~ 436 (473)
T TIGR02095 428 LAALSRALR 436 (473)
T ss_pred HHHHHHHHH
Confidence 899888875
No 155
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=98.41 E-value=6.3e-06 Score=86.63 Aligned_cols=53 Identities=23% Similarity=0.021 Sum_probs=39.8
Q ss_pred CCCeEEcCCC---CCHHHHHhhcCEEEecCC----hhHHHHHHHcCCcEEEEeCCCCCCh
Q 001947 261 PPNFIKLPKD---AYTPDFMAASDCMLGKIG----YGTVSEALAYKLPFVFVRRDYFNEE 313 (992)
Q Consensus 261 ~~nv~v~~f~---~~~p~lL~aaDlvIt~~G----~~Tv~Eal~~GvP~V~iP~~~~~EQ 313 (992)
..|+.+.++. +.+..+++.||++|+... .++++|||++|+|+|+.+.+...|.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~ 219 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEI 219 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceE
Confidence 3566666653 233456677999999775 5899999999999999987666553
No 156
>PRK14099 glycogen synthase; Provisional
Probab=98.40 E-value=5.3e-05 Score=90.46 Aligned_cols=133 Identities=20% Similarity=0.175 Sum_probs=83.1
Q ss_pred HHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-HHHh---hCCCCcEEEEeCCCCC---C--------CCCCe-EEcCCCC
Q 001947 211 KEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS---Q--------LPPNF-IKLPKDA 271 (992)
Q Consensus 211 ~e~r~~l~~~~d-~~~Vlvs~Gg~~~~--~~-ll~~---l~~~~~~~Vv~G~~~~---~--------l~~nv-~v~~f~~ 271 (992)
.++++.+|++.+ ...++.+.|..... .. ++++ +...++++++.|.+.. + .+.++ .+.+|.+
T Consensus 281 ~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~v~~~~G~~~ 360 (485)
T PRK14099 281 AALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGEGAQLALLGSGDAELEARFRAAAQAYPGQIGVVIGYDE 360 (485)
T ss_pred HHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhcCcEEEEEecCCHHHHHHHHHHHHHCCCCEEEEeCCCH
Confidence 467788898753 23455566766542 22 3332 3334678888886542 1 35565 5788877
Q ss_pred CHHHHH-hhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHH-HHHH--cCcEEEEecCCCChhhHHHHH
Q 001947 272 YTPDFM-AASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRN-MLEF--YQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 272 ~~p~lL-~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~-~le~--~G~Gi~v~~~~~~~~~l~~al 343 (992)
.++.+| +.||++|..+ | ..+.+|||+||+|.|+....+..|.-.... ..+. .+.|..++..+ ++.|.++|
T Consensus 361 ~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d--~~~La~ai 438 (485)
T PRK14099 361 ALAHLIQAGADALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSPVT--ADALAAAL 438 (485)
T ss_pred HHHHHHHhcCCEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCCCC--HHHHHHHH
Confidence 788777 5799999743 2 358899999998877766545444311100 0011 15788887765 57888888
Q ss_pred HH
Q 001947 344 ER 345 (992)
Q Consensus 344 ~~ 345 (992)
.+
T Consensus 439 ~~ 440 (485)
T PRK14099 439 RK 440 (485)
T ss_pred HH
Confidence 87
No 157
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.33 E-value=0.00014 Score=82.83 Aligned_cols=125 Identities=20% Similarity=0.171 Sum_probs=79.7
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHhh--CCCCcEEEEeCCCCCC------------CCCCeEEcCCCCC--
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY--LPSGWKCLVCGASDSQ------------LPPNFIKLPKDAY-- 272 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~l--~~~~~~~Vv~G~~~~~------------l~~nv~v~~f~~~-- 272 (992)
+.++.++++++. . +++.|+.... ..+++++ ...++.++++|..... ..++|++.|++..
T Consensus 183 ~~~~~~~~~~~~-~-i~~~G~~~~~Kg~~~li~a~~~l~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~~V~~~g~~~~~~ 260 (363)
T cd04955 183 EILKKYGLEPGR-Y-YLLVGRIVPENNIDDLIEAFSKSNSGKKLVIVGNADHNTPYGKLLKEKAAADPRIIFVGPIYDQE 260 (363)
T ss_pred hhHHhcCCCCCc-E-EEEEecccccCCHHHHHHHHHhhccCceEEEEcCCCCcchHHHHHHHHhCCCCcEEEccccChHH
Confidence 344555554433 3 4567776553 2344432 2236788888875211 3578999998753
Q ss_pred HHHHHhhcCEEEecCC-----hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHh
Q 001947 273 TPDFMAASDCMLGKIG-----YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~G-----~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll 347 (992)
+.+++..||+++..+- .+++.|||++|+|+|+...+...|. ++. .|..+...+ .+.+++.+++
T Consensus 261 ~~~~~~~ad~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~------~~~--~g~~~~~~~----~l~~~i~~l~ 328 (363)
T cd04955 261 LLELLRYAALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREV------LGD--KAIYFKVGD----DLASLLEELE 328 (363)
T ss_pred HHHHHHhCCEEEeCCccCCCCChHHHHHHHcCCCEEEecCCcccee------ecC--CeeEecCch----HHHHHHHHHH
Confidence 4588999999986432 2479999999999999886655554 333 344554433 2788999988
Q ss_pred hCC
Q 001947 348 SLK 350 (992)
Q Consensus 348 ~~~ 350 (992)
+++
T Consensus 329 ~~~ 331 (363)
T cd04955 329 ADP 331 (363)
T ss_pred hCH
Confidence 765
No 158
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=98.33 E-value=1.9e-05 Score=89.43 Aligned_cols=122 Identities=14% Similarity=-0.027 Sum_probs=80.9
Q ss_pred CCCCCCcEEEEEcCCCCCh---hhHHHh---hCC--CCcEEEEeCCCCCC------------CCCCeEEcCCCC--CHHH
Q 001947 218 GIEDDVKLLILNFGGQPAG---WKLKEE---YLP--SGWKCLVCGASDSQ------------LPPNFIKLPKDA--YTPD 275 (992)
Q Consensus 218 ~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~~--~~~~~Vv~G~~~~~------------l~~nv~v~~f~~--~~p~ 275 (992)
....++ .++++.|+.... ..+++. +.. .++.++++|..... ..+++++.++.+ .+.+
T Consensus 190 ~~~~~~-~~i~~~G~~~~~K~~~~~l~~~~~~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~ 268 (365)
T cd03809 190 LYLLPR-PYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKLVIVGKRGWLNEELLARLRELGLGDRVRFLGYVSDEELAA 268 (365)
T ss_pred hcCCCC-CeEEEeCCCccccCHHHHHHHHHHHHHhcCCCCEEEecCCccccHHHHHHHHHcCCCCeEEECCCCChhHHHH
Confidence 333444 456677777652 223332 222 24677888864421 367899999884 5678
Q ss_pred HHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 276 FMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 276 lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+|+.||++|..+ ..+++.||+++|+|+|+...+...|. +. ..|..+...+ .+.+.++|.++++++
T Consensus 269 ~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~------~~--~~~~~~~~~~--~~~~~~~i~~l~~~~ 337 (365)
T cd03809 269 LYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEV------AG--DAALYFDPLD--PEALAAAIERLLEDP 337 (365)
T ss_pred HHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCCccce------ec--CceeeeCCCC--HHHHHHHHHHHhcCH
Confidence 999999999642 34589999999999999876555554 22 3455666554 578999999988755
No 159
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=98.29 E-value=5.1e-05 Score=86.55 Aligned_cols=117 Identities=17% Similarity=0.068 Sum_probs=84.5
Q ss_pred EEEEcCCCCCh---hhHHHhhCCCCcEEEEeCCCCCC------CCCCeEEcCCCCC--HHHHHhhcCEEEecC--Ch-hH
Q 001947 226 LILNFGGQPAG---WKLKEEYLPSGWKCLVCGASDSQ------LPPNFIKLPKDAY--TPDFMAASDCMLGKI--GY-GT 291 (992)
Q Consensus 226 Vlvs~Gg~~~~---~~ll~~l~~~~~~~Vv~G~~~~~------l~~nv~v~~f~~~--~p~lL~aaDlvIt~~--G~-~T 291 (992)
.+++.|..... ..+++.+....+.++++|..... ..+||+++|+++. ++++|+.||++|..+ |+ .+
T Consensus 197 ~il~~G~~~~~K~~~~li~a~~~~~~~l~ivG~g~~~~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ps~e~~g~~ 276 (351)
T cd03804 197 YYLSVGRLVPYKRIDLAIEAFNKLGKRLVVIGDGPELDRLRAKAGPNVTFLGRVSDEELRDLYARARAFLFPAEEDFGIV 276 (351)
T ss_pred EEEEEEcCccccChHHHHHHHHHCCCcEEEEECChhHHHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEECCcCCCCch
Confidence 35567776653 23444432223778888876531 5789999999865 778999999999642 33 47
Q ss_pred HHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 292 VSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 292 v~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+.|||++|+|+|+....+..|. +++...|..++..+ ++.+.++|.++++++
T Consensus 277 ~~Eama~G~Pvi~~~~~~~~e~------i~~~~~G~~~~~~~--~~~la~~i~~l~~~~ 327 (351)
T cd03804 277 PVEAMASGTPVIAYGKGGALET------VIDGVTGILFEEQT--VESLAAAVERFEKNE 327 (351)
T ss_pred HHHHHHcCCCEEEeCCCCCcce------eeCCCCEEEeCCCC--HHHHHHHHHHHHhCc
Confidence 8899999999999886555554 66667899887655 577899999998876
No 160
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=98.29 E-value=0.00045 Score=85.29 Aligned_cols=125 Identities=13% Similarity=0.030 Sum_probs=79.9
Q ss_pred HHHhCC--CCCCcEEEEEcCCCCCh---hhHHHhh-----CCCCcEEEEeCCCCC-----------C------------C
Q 001947 214 RKELGI--EDDVKLLILNFGGQPAG---WKLKEEY-----LPSGWKCLVCGASDS-----------Q------------L 260 (992)
Q Consensus 214 r~~l~~--~~d~~~Vlvs~Gg~~~~---~~ll~~l-----~~~~~~~Vv~G~~~~-----------~------------l 260 (992)
++.+|+ ++++| ++++.|..... ..+++++ ....+.++++|.... . +
T Consensus 539 ~~~~G~l~d~~kp-iIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~LVIVGGg~~~~~s~d~ee~~~i~~L~~la~~~gL 617 (784)
T TIGR02470 539 DEHYGYLKDPNKP-IIFSMARLDRVKNLTGLVECYGRSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQL 617 (784)
T ss_pred HHHhCCCCCCCCc-EEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEEEEEeCCcccccccchhHHHHHHHHHHHHHHhCC
Confidence 456665 45566 45677876652 2344432 123466676654210 0 3
Q ss_pred CCCeEEcCCC---CCHHHHHh----hcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 001947 261 PPNFIKLPKD---AYTPDFMA----ASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (992)
Q Consensus 261 ~~nv~v~~f~---~~~p~lL~----aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v 329 (992)
..+|.+.++. ..++++++ ++|+||..+ -+.|+.|||+||+|+|+....+. ...+++...|..+
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~------~EiV~dg~tGfLV 691 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGP------LEIIQDGVSGFHI 691 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCH------HHHhcCCCcEEEe
Confidence 4678888874 23456664 357999754 23699999999999999875443 3346667789999
Q ss_pred ecCCCChhhHHHHHHHHh
Q 001947 330 IRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 330 ~~~~~~~~~l~~al~~ll 347 (992)
+..+ ++.+.++|.+++
T Consensus 692 dp~D--~eaLA~aL~~ll 707 (784)
T TIGR02470 692 DPYH--GEEAAEKIVDFF 707 (784)
T ss_pred CCCC--HHHHHHHHHHHH
Confidence 8765 477888888776
No 161
>PLN02501 digalactosyldiacylglycerol synthase
Probab=98.27 E-value=3.2e-05 Score=92.30 Aligned_cols=222 Identities=18% Similarity=0.216 Sum_probs=123.8
Q ss_pred HHHHHHHHHcCCCcEEEECC-Cch-----HHHHHHHcCCcEEEE--ecCchhHHHHHHHhhhcc-chHH----HH-HHHH
Q 001947 107 LKDEVEWLNSIKADLVVSDV-VPV-----ACRAAADAGIRSVCV--TNFSWDFIYAEYVMAAGH-HHRS----IV-WQIA 172 (992)
Q Consensus 107 l~~~~~~L~~~kPDlVVsD~-~~~-----a~~aA~~~gIP~v~i--s~~~~~~~~~~~~~~~~~-~~~~----i~-~~l~ 172 (992)
+.+..+.|.+++||+|+... ..+ +..+|++++ |+|++ |++. .|+..+.. .... .+ +++.
T Consensus 423 ~gdI~~~L~~f~PDVVHLatP~~LGw~~~Glr~ArKl~-PVVasyHTny~------eYl~~y~~g~L~~~llk~l~~~v~ 495 (794)
T PLN02501 423 AGDTSQFIPSKDADIAILEEPEHLNWYHHGKRWTDKFN-HVVGVVHTNYL------EYIKREKNGALQAFFVKHINNWVT 495 (794)
T ss_pred hHHHHHHhhccCCCEEEECCchhhccHHHHHHHHHHcC-CeEEEEeCCcH------HHHhHhcchhHHHHHHHHHHHHHH
Confidence 34567788999999999765 322 455889999 88765 5553 12221111 0111 11 2233
Q ss_pred hhccccceeeecCCCCC-CCC--CCceeecCcccccCCC-ChHHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHhh--
Q 001947 173 EDYSHCEFLIRLPGYCP-MPA--FRDVIDVPLVVRRLHK-SRKEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEEY-- 243 (992)
Q Consensus 173 ~~y~~~d~ll~~~~~~~-~p~--~~~v~~vp~~~~~~~~-~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~l-- 243 (992)
..| |+..+.+..... .+. ..++ .|+....... .+...++.++++...+. +++.|..... . .+++++
T Consensus 496 r~h--cD~VIaPS~atq~L~~~vI~nV--nGVDte~F~P~~r~~~~r~lgi~~~~kg-iLfVGRLa~EKGld~LLeAla~ 570 (794)
T PLN02501 496 RAY--CHKVLRLSAATQDLPKSVICNV--HGVNPKFLKIGEKVAEERELGQQAFSKG-AYFLGKMVWAKGYRELIDLLAK 570 (794)
T ss_pred Hhh--CCEEEcCCHHHHHhcccceeec--ccccccccCCcchhHHHHhcCCccccCc-eEEEEcccccCCHHHHHHHHHH
Confidence 333 666554321110 111 1112 2443332211 22223345665433332 3445666552 2 344432
Q ss_pred -C--CCCcEEEEeCCCCCC---------CCCCeEEcCCCCCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeC
Q 001947 244 -L--PSGWKCLVCGASDSQ---------LPPNFIKLPKDAYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 244 -~--~~~~~~Vv~G~~~~~---------l~~nv~v~~f~~~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~ 307 (992)
. .+++.++++|.+... +.-++.++++.++++++|+.+|+||..+ | .+++.|||+||+|+|+...
T Consensus 571 L~~~~pnvrLvIVGDGP~reeLe~la~eLgL~V~FLG~~dd~~~lyasaDVFVlPS~sEgFGlVlLEAMA~GlPVVATd~ 650 (794)
T PLN02501 571 HKNELDGFNLDVFGNGEDAHEVQRAAKRLDLNLNFLKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADH 650 (794)
T ss_pred HHhhCCCeEEEEEcCCccHHHHHHHHHHcCCEEEecCCCCCHHHHHHhCCEEEECCCcccchHHHHHHHHcCCCEEEecC
Confidence 1 246888888876532 2234777888887778999999999743 2 3689999999999999986
Q ss_pred CCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCC
Q 001947 308 DYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 308 ~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
++ .+. +...+.|... . +++.+.++|.+++++++
T Consensus 651 pG-~e~------V~~g~nGll~--~--D~EafAeAI~~LLsd~~ 683 (794)
T PLN02501 651 PS-NEF------FRSFPNCLTY--K--TSEDFVAKVKEALANEP 683 (794)
T ss_pred CC-Cce------EeecCCeEec--C--CHHHHHHHHHHHHhCch
Confidence 54 221 2222334332 2 25788999999998663
No 162
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=98.25 E-value=0.00013 Score=91.85 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=63.5
Q ss_pred CCCeEEcCCC--CCHHHHHhhc----CEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe
Q 001947 261 PPNFIKLPKD--AYTPDFMAAS----DCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI 330 (992)
Q Consensus 261 ~~nv~v~~f~--~~~p~lL~aa----DlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~ 330 (992)
..+|.+.++. +.++++|+.| |+||..+ | ..++.|||+||+|+|+....+..| .++....|+.++
T Consensus 547 ~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~E------II~~g~nGlLVd 620 (1050)
T TIGR02468 547 YGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVD------IHRVLDNGLLVD 620 (1050)
T ss_pred CCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHH------HhccCCcEEEEC
Confidence 4678888875 4688999877 6999754 3 359999999999999987654433 355566799898
Q ss_pred cCCCChhhHHHHHHHHhhCCC
Q 001947 331 RRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 331 ~~~~~~~~l~~al~~ll~~~~ 351 (992)
..+ ++.|.++|.++++++.
T Consensus 621 P~D--~eaLA~AL~~LL~Dpe 639 (1050)
T TIGR02468 621 PHD--QQAIADALLKLVADKQ 639 (1050)
T ss_pred CCC--HHHHHHHHHHHhhCHH
Confidence 766 5789999999998653
No 163
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=98.24 E-value=0.00033 Score=82.25 Aligned_cols=118 Identities=14% Similarity=0.032 Sum_probs=77.8
Q ss_pred cEEEEEcCCCCCh---hhHHHh---hC---C----CCcEEEEeCCCCC---------------C--CCCCeEEcCCCC--
Q 001947 224 KLLILNFGGQPAG---WKLKEE---YL---P----SGWKCLVCGASDS---------------Q--LPPNFIKLPKDA-- 271 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~---~~ll~~---l~---~----~~~~~Vv~G~~~~---------------~--l~~nv~v~~f~~-- 271 (992)
+.++++.|..... ..++++ +. + +++++++.|.... + +.++|+++++.+
T Consensus 237 ~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~ 316 (419)
T cd03806 237 ENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNEDDEKRVEDLKLLAKELGLEDKVEFVVNAPFE 316 (419)
T ss_pred CcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCcccHHHHHHHHHHHHHhCCCCeEEEecCCCHH
Confidence 4567788866542 123332 21 2 2478888886421 0 357899988764
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH---HcCcEEEEecCCCChhhHHHHHH
Q 001947 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE---FYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le---~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
.++.+|+.||++|... |+ .++.|||++|+|+|+....+..+. .++ ....|..+. +++.+.++|.
T Consensus 317 ~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~-----iv~~~~~g~~G~l~~----d~~~la~ai~ 387 (419)
T cd03806 317 ELLEELSTASIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLD-----IVVPWDGGPTGFLAS----TAEEYAEAIE 387 (419)
T ss_pred HHHHHHHhCeEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchh-----eeeccCCCCceEEeC----CHHHHHHHHH
Confidence 4668999999999633 33 489999999999999764332221 133 356787753 4689999999
Q ss_pred HHhhCC
Q 001947 345 RAISLK 350 (992)
Q Consensus 345 ~ll~~~ 350 (992)
++++++
T Consensus 388 ~ll~~~ 393 (419)
T cd03806 388 KILSLS 393 (419)
T ss_pred HHHhCC
Confidence 999865
No 164
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=98.23 E-value=5.5e-05 Score=88.12 Aligned_cols=95 Identities=15% Similarity=0.110 Sum_probs=70.5
Q ss_pred CCcEEEEeCCCCCC------CCCCeEEcCCCCCHHHHHhhcCEEEec----CCh-hHHHHHHHcCCcEEEEeCCCCCChH
Q 001947 246 SGWKCLVCGASDSQ------LPPNFIKLPKDAYTPDFMAASDCMLGK----IGY-GTVSEALAYKLPFVFVRRDYFNEEP 314 (992)
Q Consensus 246 ~~~~~Vv~G~~~~~------l~~nv~v~~f~~~~p~lL~aaDlvIt~----~G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~ 314 (992)
+++.+++.|.+... ..++|++.|++++++.+|+.||++|.. .|. +.+.|||++|+|+|+.+... +.
T Consensus 258 p~~~l~ivG~g~~~~~~~l~~~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~--~~- 334 (397)
T TIGR03087 258 PAAEFYIVGAKPSPAVRALAALPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAA--EG- 334 (397)
T ss_pred CCcEEEEECCCChHHHHHhccCCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCccc--cc-
Confidence 57888888876532 357899999999999999999999943 243 36999999999999987421 21
Q ss_pred HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 315 ~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.....|.|..+. . +++.+.++|.++++++
T Consensus 335 ----i~~~~~~g~lv~-~--~~~~la~ai~~ll~~~ 363 (397)
T TIGR03087 335 ----IDALPGAELLVA-A--DPADFAAAILALLANP 363 (397)
T ss_pred ----ccccCCcceEeC-C--CHHHHHHHHHHHHcCH
Confidence 112346777775 3 3688999999998765
No 165
>PLN02939 transferase, transferring glycosyl groups
Probab=98.23 E-value=0.00067 Score=84.41 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=87.9
Q ss_pred hHHHHHHhCCCCC--CcEEEEEcCCCCCh--hh-HHHh---hCCCCcEEEEeCCCCC-----C---------CCCCeEEc
Q 001947 210 RKEVRKELGIEDD--VKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDS-----Q---------LPPNFIKL 267 (992)
Q Consensus 210 r~e~r~~l~~~~d--~~~Vlvs~Gg~~~~--~~-ll~~---l~~~~~~~Vv~G~~~~-----~---------l~~nv~v~ 267 (992)
+..+++.+|++.+ ...++.+.|..... .. ++++ +...++++++.|.+.. . ..++|.+.
T Consensus 763 K~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~~dvqLVIvGdGp~~~~e~eL~~La~~l~l~drV~Fl 842 (977)
T PLN02939 763 KAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAELGGQFVLLGSSPVPHIQREFEGIADQFQSNNNIRLI 842 (977)
T ss_pred hHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhhcCCEEEEEeCCCcHHHHHHHHHHHHHcCCCCeEEEE
Confidence 4578899999753 23466777776652 22 2332 3335678888886632 1 24578887
Q ss_pred CCCCCH--HHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHH--HHHH-HHcCcEEEEecCCCChhh
Q 001947 268 PKDAYT--PDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFL--RNML-EFYQGGVEMIRRDLLTGH 338 (992)
Q Consensus 268 ~f~~~~--p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~N--A~~l-e~~G~Gi~v~~~~~~~~~ 338 (992)
++.++. +.+|++||+||..+ -+.+++|||++|+|.|+....+..|...+ ...+ +..+.|..+...+ ++.
T Consensus 843 G~~de~lah~IYAaADIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D--~ea 920 (977)
T PLN02939 843 LKYDEALSHSIYAASDMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPD--EQG 920 (977)
T ss_pred eccCHHHHHHHHHhCCEEEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecCCC--HHH
Confidence 766543 47999999999743 23699999999999999876655543110 0111 1235688887654 567
Q ss_pred HHHHHHHHhh
Q 001947 339 WKPYLERAIS 348 (992)
Q Consensus 339 l~~al~~ll~ 348 (992)
+..+|.+++.
T Consensus 921 La~AL~rAL~ 930 (977)
T PLN02939 921 LNSALERAFN 930 (977)
T ss_pred HHHHHHHHHH
Confidence 8888887764
No 166
>PLN02316 synthase/transferase
Probab=98.22 E-value=0.00072 Score=85.51 Aligned_cols=138 Identities=17% Similarity=0.067 Sum_probs=85.4
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh--hhH-HHh---hCCCCcEEEEeCCCCC-----C-------C----CCCeEEc
Q 001947 210 RKEVRKELGIEDDVKLLILNFGGQPAG--WKL-KEE---YLPSGWKCLVCGASDS-----Q-------L----PPNFIKL 267 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~l-l~~---l~~~~~~~Vv~G~~~~-----~-------l----~~nv~v~ 267 (992)
+..+++.+|++.+...++++.|..... ..+ +++ +...+.++++.|.+.. . + +.+|.+.
T Consensus 826 k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~~~qlVIvG~Gpd~~~e~~l~~La~~Lg~~~~~rV~f~ 905 (1036)
T PLN02316 826 KEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSSHHDRARLC 905 (1036)
T ss_pred HHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhcCcEEEEEeCCCCHHHHHHHHHHHHHhCccCCCeEEEE
Confidence 345788899974333356667776652 333 332 3344678888886531 0 1 4567665
Q ss_pred CCCCC-HH-HHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHH-------HHHHHcCcEEEEecCCC
Q 001947 268 PKDAY-TP-DFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLR-------NMLEFYQGGVEMIRRDL 334 (992)
Q Consensus 268 ~f~~~-~p-~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA-------~~le~~G~Gi~v~~~~~ 334 (992)
+..+. +. .+|++||+|+..+ =..+.+|||++|+|.|+....+..|..... +.....+.|..++..+
T Consensus 906 g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d- 984 (1036)
T PLN02316 906 LTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGAD- 984 (1036)
T ss_pred ecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCC-
Confidence 33333 32 6899999999643 126999999999999998765555431110 0000125688887655
Q ss_pred ChhhHHHHHHHHhhC
Q 001947 335 LTGHWKPYLERAISL 349 (992)
Q Consensus 335 ~~~~l~~al~~ll~~ 349 (992)
++.+..+|.+++.+
T Consensus 985 -~~aLa~AL~raL~~ 998 (1036)
T PLN02316 985 -AAGVDYALNRAISA 998 (1036)
T ss_pred -HHHHHHHHHHHHhh
Confidence 57888899988864
No 167
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism]
Probab=98.22 E-value=0.00021 Score=78.76 Aligned_cols=81 Identities=16% Similarity=0.166 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.+.+..++..+-+++|.. -.+.|...++.|.++||+||||...|+++|++.++++.+|..++-++|..+ ..|
T Consensus 71 ~~k~~~~ld~~R~~~~~~--~~~~i~s~n~~ptaaGLaSSaag~AAl~~Al~~~~~~~~d~~~lS~~AR~g------SGS 142 (329)
T COG3407 71 NEKARRVLDRFRKEYGIS--FKVKIVSYNNFPTAAGLASSAAGAAALAAALNRLYDLDLDDEFLSRIARLG------SGS 142 (329)
T ss_pred HHHHHHHHHHHHHhhccc--ceEEEEEecCCCccccccccHHHHHHHHHHHHhhhccCCCHHHHHHHHHHh------ccc
Confidence 567777777655466654 479999999999999999999999999999999999999999999999863 333
Q ss_pred CccchhhhhccCc
Q 001947 689 GVMDQMASACGEA 701 (992)
Q Consensus 689 G~~D~~~~~~Gg~ 701 (992)
+ .-++|||.
T Consensus 143 a----~RS~~Gg~ 151 (329)
T COG3407 143 A----SRSIFGGF 151 (329)
T ss_pred h----hhhhcCCe
Confidence 3 35999996
No 168
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=98.22 E-value=0.00012 Score=84.19 Aligned_cols=216 Identities=14% Similarity=0.100 Sum_probs=115.3
Q ss_pred hHHHHHHHHHcCCCcEEEECC----CchHHHHHHHcCCcEEEEe--cCchh---HHHHHHHhhhccchHHHHHHHHhh-c
Q 001947 106 ILKDEVEWLNSIKADLVVSDV----VPVACRAAADAGIRSVCVT--NFSWD---FIYAEYVMAAGHHHRSIVWQIAED-Y 175 (992)
Q Consensus 106 ~l~~~~~~L~~~kPDlVVsD~----~~~a~~aA~~~gIP~v~is--~~~~~---~~~~~~~~~~~~~~~~i~~~l~~~-y 175 (992)
.+....+++++++||+|++.- ..++.++|..++||++.+. +.++. ...+. +...++.. +
T Consensus 81 ~~~~~~~~~~~~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~~~eE~~r~-----------~i~~la~l~f 149 (365)
T TIGR03568 81 TIIGFSDAFERLKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEGAIDESIRH-----------AITKLSHLHF 149 (365)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCCCchHHHHH-----------HHHHHHhhcc
Confidence 455667789999999999643 3367889999999999772 22221 11111 11111110 0
Q ss_pred ccc----ceeeecCCCCCCCCCCceeecCccccc---CCCChHHHHHHhCCCCCCcEEEEEcCCCC--Ch------hhHH
Q 001947 176 SHC----EFLIRLPGYCPMPAFRDVIDVPLVVRR---LHKSRKEVRKELGIEDDVKLLILNFGGQP--AG------WKLK 240 (992)
Q Consensus 176 ~~~----d~ll~~~~~~~~p~~~~v~~vp~~~~~---~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~--~~------~~ll 240 (992)
... +.++.. .. .+....+++.+.+... ....+.++.+.++++.++++|++++-... .. ..++
T Consensus 150 ~~t~~~~~~L~~e--g~-~~~~i~~tG~~~iD~l~~~~~~~~~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li 226 (365)
T TIGR03568 150 VATEEYRQRVIQM--GE-DPDRVFNVGSPGLDNILSLDLLSKEELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELL 226 (365)
T ss_pred CCCHHHHHHHHHc--CC-CCCcEEEECCcHHHHHHhhhccCHHHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHH
Confidence 000 011110 00 0111122343333211 11234567788888766678888775432 11 1233
Q ss_pred HhhCCC--CcEEEEeC--CCCCC--------C--CCCeEEcCCCCC--HHHHHhhcCEEEecCChhHHHHHHHcCCcEEE
Q 001947 241 EEYLPS--GWKCLVCG--ASDSQ--------L--PPNFIKLPKDAY--TPDFMAASDCMLGKIGYGTVSEALAYKLPFVF 304 (992)
Q Consensus 241 ~~l~~~--~~~~Vv~G--~~~~~--------l--~~nv~v~~f~~~--~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~ 304 (992)
+.+... .+.++... +.... . .+|+.+.+..++ +..+|+.|+++||.++. .+.||.++|+|+|.
T Consensus 227 ~~L~~~~~~~~vi~P~~~p~~~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll~~a~~vitdSSg-gi~EA~~lg~Pvv~ 305 (365)
T TIGR03568 227 KALDELNKNYIFTYPNADAGSRIINEAIEEYVNEHPNFRLFKSLGQERYLSLLKNADAVIGNSSS-GIIEAPSFGVPTIN 305 (365)
T ss_pred HHHHHhccCCEEEEeCCCCCchHHHHHHHHHhcCCCCEEEECCCChHHHHHHHHhCCEEEEcChh-HHHhhhhcCCCEEe
Confidence 333222 34333332 22111 1 467888875543 33788999999998853 44999999999998
Q ss_pred EeCCCCCChHHHHHHHHHcCc-EEEEecCCCChhhHHHHHHHHhh
Q 001947 305 VRRDYFNEEPFLRNMLEFYQG-GVEMIRRDLLTGHWKPYLERAIS 348 (992)
Q Consensus 305 iP~~~~~EQ~~NA~~le~~G~-Gi~v~~~~~~~~~l~~al~~ll~ 348 (992)
+. ..+| ..+.|. .+.+.. .++.+.+++.++++
T Consensus 306 l~--~R~e-------~~~~g~nvl~vg~---~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 306 IG--TRQK-------GRLRADSVIDVDP---DKEEIVKAIEKLLD 338 (365)
T ss_pred ec--CCch-------hhhhcCeEEEeCC---CHHHHHHHHHHHhC
Confidence 85 2222 123343 333432 35778888888654
No 169
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=98.21 E-value=6.2e-05 Score=89.88 Aligned_cols=136 Identities=18% Similarity=0.124 Sum_probs=86.3
Q ss_pred hHHHHHHhCCC--CCCcEEEEEcCCCCCh--hh-HHHh---hCCCCcEEEEeCCCCCC-----------CCCCeEE-cCC
Q 001947 210 RKEVRKELGIE--DDVKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDSQ-----------LPPNFIK-LPK 269 (992)
Q Consensus 210 r~e~r~~l~~~--~d~~~Vlvs~Gg~~~~--~~-ll~~---l~~~~~~~Vv~G~~~~~-----------l~~nv~v-~~f 269 (992)
+..+++.++++ ++.+ ++++.|..... .. +++. +...++++++.|..... .+.|+.+ .++
T Consensus 281 k~~l~~~~g~~~~~~~~-~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~G~g~~~~~~~~~~~~~~~~~~v~~~~~~ 359 (476)
T cd03791 281 KAALQEELGLPVDPDAP-LFGFVGRLTEQKGIDLLLEALPELLELGGQLVILGSGDPEYEEALRELAARYPGRVAVLIGY 359 (476)
T ss_pred HHHHHHHcCCCcCCCCC-EEEEEeeccccccHHHHHHHHHHHHHcCcEEEEEecCCHHHHHHHHHHHHhCCCcEEEEEeC
Confidence 34577888885 4444 56777776652 22 3332 33334788888865421 2567765 455
Q ss_pred CCC-HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 270 DAY-TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 270 ~~~-~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
... ++.+++.||+++..+ -..+.+|||++|+|+|+....+..|.-.+...-.+.|.|..++..+ ++.+.++|.
T Consensus 360 ~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~--~~~l~~~i~ 437 (476)
T cd03791 360 DEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYN--ADALLAALR 437 (476)
T ss_pred CHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCC--HHHHHHHHH
Confidence 433 347899999999643 2258899999999999987666555411110011234898888655 578888998
Q ss_pred HHhh
Q 001947 345 RAIS 348 (992)
Q Consensus 345 ~ll~ 348 (992)
++++
T Consensus 438 ~~l~ 441 (476)
T cd03791 438 RALA 441 (476)
T ss_pred HHHH
Confidence 8875
No 170
>COG1817 Uncharacterized protein conserved in archaea [Function unknown]
Probab=98.16 E-value=0.00036 Score=75.24 Aligned_cols=309 Identities=15% Similarity=0.075 Sum_probs=157.2
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHH-HH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE-KY 95 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~ 95 (992)
+|.+-+. -.-|+.-...+.++|.++||+|.+.|...... .+.+..-++.+..++- .|. .++. ++
T Consensus 2 kVwiDI~--n~~hvhfFk~lI~elekkG~ev~iT~rd~~~v-~~LLd~ygf~~~~Igk-~g~-----------~tl~~Kl 66 (346)
T COG1817 2 KVWIDIG--NPPHVHFFKNLIWELEKKGHEVLITCRDFGVV-TELLDLYGFPYKSIGK-HGG-----------VTLKEKL 66 (346)
T ss_pred eEEEEcC--CcchhhHHHHHHHHHHhCCeEEEEEEeecCcH-HHHHHHhCCCeEeecc-cCC-----------ccHHHHH
Confidence 4444433 24688889999999999999999987653221 1111111222333211 110 1122 33
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEecCchhH-------HHHHHHhhhccchHHHH
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDF-------IYAEYVMAAGHHHRSIV 168 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~~~~~~-------~~~~~~~~~~~~~~~i~ 168 (992)
..++ .....+.+++.+++||+.+.-+.+-....|.-+|+|++.+.|..... .+..++.. +...+ .
T Consensus 67 ~~~~-----eR~~~L~ki~~~~kpdv~i~~~s~~l~rvafgLg~psIi~~D~ehA~~qnkl~~Pla~~ii~-P~~~~--~ 138 (346)
T COG1817 67 LESA-----ERVYKLSKIIAEFKPDVAIGKHSPELPRVAFGLGIPSIIFVDNEHAEAQNKLTLPLADVIIT-PEAID--E 138 (346)
T ss_pred HHHH-----HHHHHHHHHHhhcCCceEeecCCcchhhHHhhcCCceEEecCChhHHHHhhcchhhhhheec-ccccc--h
Confidence 3322 13345577889999999999778888889999999999884432110 00000000 00000 0
Q ss_pred HHHHhhccccceeeecCCCCCCCCCCceeecCcccc---cCCC-ChHHHHHHhCCCCCCcEEEEEcCCCCCh-------h
Q 001947 169 WQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVR---RLHK-SRKEVRKELGIEDDVKLLILNFGGQPAG-------W 237 (992)
Q Consensus 169 ~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~---~~~~-~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~-------~ 237 (992)
+.+...... + .++.+++.+.. .... +-+++.+++|+..+.++|++-+=+.++. .
T Consensus 139 ~~~~~~G~~-----------p----~~i~~~~giae~~~v~~f~pd~evlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~ 203 (346)
T COG1817 139 EELLDFGAD-----------P----NKISGYNGIAELANVYGFVPDPEVLKELGLEEGETYIVMRPEPWGAHYDNGDRGI 203 (346)
T ss_pred HHHHHhCCC-----------c----cceecccceeEEeecccCCCCHHHHHHcCCCCCCceEEEeeccccceeeccccch
Confidence 000000000 0 01111111111 0101 1247778999988888887765544431 1
Q ss_pred ----hHHHhhCCCCcEEEEeCCCCCC--CCCCeE---EcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCC
Q 001947 238 ----KLKEEYLPSGWKCLVCGASDSQ--LPPNFI---KLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 238 ----~ll~~l~~~~~~~Vv~G~~~~~--l~~nv~---v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
.+++.|..-+ .+++. ....+ +-+.+. .-.-..+.-++|--|+++|+.|| +.-.||+..|+|.|.+- +
T Consensus 204 ~~~~~li~~l~k~g-iV~ip-r~~~~~eife~~~n~i~pk~~vD~l~Llyya~lvig~gg-TMarEaAlLGtpaIs~~-p 279 (346)
T COG1817 204 SVLPDLIKELKKYG-IVLIP-REKEQAEIFEGYRNIIIPKKAVDTLSLLYYATLVIGAGG-TMAREAALLGTPAISCY-P 279 (346)
T ss_pred hhHHHHHHHHHhCc-EEEec-CchhHHHHHhhhccccCCcccccHHHHHhhhheeecCCc-hHHHHHHHhCCceEEec-C
Confidence 2233343333 33333 22222 222222 11111122258888999998555 56679999999999985 3
Q ss_pred CCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC----ccCCCCHHHHHHHHHHHHHcc
Q 001947 309 YFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC----YEGGINGGEVAAHILQETAIG 373 (992)
Q Consensus 309 ~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~----~~~~~~G~~~aA~~I~~~~~~ 373 (992)
+ .-...-+++.+.|.-.. ..+.. +.|.-+++.+ .++.- .....+-.+.+.+.+++.+.+
T Consensus 280 G--kll~vdk~lie~G~~~~--s~~~~-~~~~~a~~~l-~~~~~kK~~~~k~e~~~~~ii~~ve~~~e~ 342 (346)
T COG1817 280 G--KLLAVDKYLIEKGLLYH--STDEI-AIVEYAVRNL-KYRRLKKTGVLKLEDPTRLIIDVVEEMLET 342 (346)
T ss_pred C--ccccccHHHHhcCceee--cCCHH-HHHHHHHHHh-hchhhccccccccccHHHHHHHHHHHHhhh
Confidence 3 12334467788776543 22321 4454444444 33311 114456666666777666543
No 171
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.14 E-value=1.4e-05 Score=91.15 Aligned_cols=135 Identities=16% Similarity=0.107 Sum_probs=78.2
Q ss_pred CCCcEEEEEcCCCCCh------hhH---HHhhCC-CCcEEEEeCCCCCC-----------CCCCeEEcCCCCCH--HHHH
Q 001947 221 DDVKLLILNFGGQPAG------WKL---KEEYLP-SGWKCLVCGASDSQ-----------LPPNFIKLPKDAYT--PDFM 277 (992)
Q Consensus 221 ~d~~~Vlvs~Gg~~~~------~~l---l~~l~~-~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~--p~lL 277 (992)
..++++++++=..... ..+ ++++.. .++.+++..++.+. + +|+++++...+. -.+|
T Consensus 178 ~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~~~i~~~l~~~-~~v~~~~~l~~~~~l~ll 256 (346)
T PF02350_consen 178 APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGSDIIIEKLKKY-DNVRLIEPLGYEEYLSLL 256 (346)
T ss_dssp TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHHHHHHHHHTT--TTEEEE----HHHHHHHH
T ss_pred cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHHHHHHHHhccc-CCEEEECCCCHHHHHHHH
Confidence 5678899998443321 122 223322 46777777665431 4 588877654332 2788
Q ss_pred hhcCEEEecCChhHHH-HHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC----
Q 001947 278 AASDCMLGKIGYGTVS-EALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC---- 352 (992)
Q Consensus 278 ~aaDlvIt~~G~~Tv~-Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~---- 352 (992)
+.|+++||.+| ++. ||.++|+|+|.+... .| .+.....|..+.+. ..++.+..++.++++....
T Consensus 257 ~~a~~vvgdSs--GI~eEa~~lg~P~v~iR~~--ge----Rqe~r~~~~nvlv~---~~~~~I~~ai~~~l~~~~~~~~~ 325 (346)
T PF02350_consen 257 KNADLVVGDSS--GIQEEAPSLGKPVVNIRDS--GE----RQEGRERGSNVLVG---TDPEAIIQAIEKALSDKDFYRKL 325 (346)
T ss_dssp HHESEEEESSH--HHHHHGGGGT--EEECSSS---S-----HHHHHTTSEEEET---SSHHHHHHHHHHHHH-HHHHHHH
T ss_pred hcceEEEEcCc--cHHHHHHHhCCeEEEecCC--CC----CHHHHhhcceEEeC---CCHHHHHHHHHHHHhChHHHHhh
Confidence 99999999999 555 999999999999522 22 23355667777754 3468889999999875111
Q ss_pred -----ccCCCCHHHHHHHHH
Q 001947 353 -----YEGGINGGEVAAHIL 367 (992)
Q Consensus 353 -----~~~~~~G~~~aA~~I 367 (992)
...+++.+++++++|
T Consensus 326 ~~~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 326 KNRPNPYGDGNASERIVEIL 345 (346)
T ss_dssp HCS--TT-SS-HHHHHHHHH
T ss_pred ccCCCCCCCCcHHHHHHHhh
Confidence 114566777777665
No 172
>PLN00142 sucrose synthase
Probab=98.10 E-value=0.00063 Score=84.09 Aligned_cols=125 Identities=15% Similarity=0.151 Sum_probs=76.0
Q ss_pred HHHhCC--CCCCcEEEEEcCCCCCh--h-hHHHhh-----CCCCcEEEEeCCC-CC--------------------C--C
Q 001947 214 RKELGI--EDDVKLLILNFGGQPAG--W-KLKEEY-----LPSGWKCLVCGAS-DS--------------------Q--L 260 (992)
Q Consensus 214 r~~l~~--~~d~~~Vlvs~Gg~~~~--~-~ll~~l-----~~~~~~~Vv~G~~-~~--------------------~--l 260 (992)
++.+++ +++++ ++++.|..... . .+++++ ...++.++++|.. .+ . +
T Consensus 562 ~e~lg~l~~~~kp-vIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~LVIVGgg~d~~~s~d~ee~~el~~L~~La~~lgL 640 (815)
T PLN00142 562 DEHIGYLKDRKKP-IIFSMARLDRVKNLTGLVEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHSLIEKYNL 640 (815)
T ss_pred HHHhCCccCCCCc-EEEEEecCcccCCHHHHHHHHHHHHHhCCCcEEEEEECCccccccccHHHHHHHHHHHHHHHHcCC
Confidence 345665 33444 56777877653 2 244432 1235677777643 10 0 3
Q ss_pred CCCeEEcCCCCC---HH---HHHh-hcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 001947 261 PPNFIKLPKDAY---TP---DFMA-ASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (992)
Q Consensus 261 ~~nv~v~~f~~~---~p---~lL~-aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v 329 (992)
..+|.++++..+ .+ .+++ ++|+||..+ |+ .|+.|||+||+|+|+....+. ...+++...|..+
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~------~EIV~dG~tG~LV 714 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGP------AEIIVDGVSGFHI 714 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCH------HHHhcCCCcEEEe
Confidence 466877775421 23 3344 579999753 32 599999999999999875443 3346666779999
Q ss_pred ecCCCChhhHHHHHHHHh
Q 001947 330 IRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 330 ~~~~~~~~~l~~al~~ll 347 (992)
+..+ ++.+.++|.+++
T Consensus 715 ~P~D--~eaLA~aI~~lL 730 (815)
T PLN00142 715 DPYH--GDEAANKIADFF 730 (815)
T ss_pred CCCC--HHHHHHHHHHHH
Confidence 8765 466777766544
No 173
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.95 E-value=0.00057 Score=79.00 Aligned_cols=114 Identities=20% Similarity=0.204 Sum_probs=75.9
Q ss_pred EEEEEcCCCCCh--hhHHHhh--CCCCcEEEEeCCCCC--C---C--CCCeEEcCCCC--CHHHHHhhcCEEEecC----
Q 001947 225 LLILNFGGQPAG--WKLKEEY--LPSGWKCLVCGASDS--Q---L--PPNFIKLPKDA--YTPDFMAASDCMLGKI---- 287 (992)
Q Consensus 225 ~Vlvs~Gg~~~~--~~ll~~l--~~~~~~~Vv~G~~~~--~---l--~~nv~v~~f~~--~~p~lL~aaDlvIt~~---- 287 (992)
.++++.|+.+.. .+++.++ ..+++.+++.|.... . + .+||+++|+.+ .++.+|+.+|++|...
T Consensus 206 ~~i~y~G~l~~~~d~~ll~~la~~~p~~~~vliG~~~~~~~~~~~~~~~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~ 285 (373)
T cd04950 206 PVIGYYGAIAEWLDLELLEALAKARPDWSFVLIGPVDVSIDPSALLRLPNVHYLGPKPYKELPAYLAGFDVAILPFRLNE 285 (373)
T ss_pred CEEEEEeccccccCHHHHHHHHHHCCCCEEEEECCCcCccChhHhccCCCEEEeCCCCHHHHHHHHHhCCEEecCCccch
Confidence 466777877653 3444443 236789999987521 1 2 37999999884 6789999999998531
Q ss_pred ----C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 288 ----G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 288 ----G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+ .+.+.|+|++|+|+|..+.+ | ..+..+.++.+ .. +++.+.++|.+++.++
T Consensus 286 ~~~~~~P~Kl~EylA~G~PVVat~~~---~------~~~~~~~~~~~-~~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 286 LTRATSPLKLFEYLAAGKPVVATPLP---E------VRRYEDEVVLI-AD--DPEEFVAAIEKALLED 341 (373)
T ss_pred hhhcCCcchHHHHhccCCCEEecCcH---H------HHhhcCcEEEe-CC--CHHHHHHHHHHHHhcC
Confidence 2 24699999999999987532 1 12223333333 33 4688999999976543
No 174
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism]
Probab=97.92 E-value=0.00034 Score=74.79 Aligned_cols=62 Identities=26% Similarity=0.391 Sum_probs=53.4
Q ss_pred CEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 630 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 630 g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
.++|.-.++.|..+||.||||=-.|++.||+.+++++.+++||..+|...- |..| =++|||+
T Consensus 105 ~lHI~S~nNFPtAAGLASSAAG~Aalv~alarly~l~~~~~els~iAR~GS----GSAC------RSl~GG~ 166 (395)
T KOG2833|consen 105 KLHIASVNNFPTAAGLASSAAGFAALVLALARLYGLDDSPEELSRIARQGS----GSAC------RSLYGGF 166 (395)
T ss_pred eEEEEecCCCcchhhhhhhhhhHHHHHHHHHHHhCCCCCHHHHHHHHhccC----chhh------hhhhcce
Confidence 467777779999999999999999999999999999999999999998632 4443 3899996
No 175
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.88 E-value=0.00036 Score=83.42 Aligned_cols=120 Identities=14% Similarity=0.047 Sum_probs=83.4
Q ss_pred CcEEEEEcCCCCCh--h-hHHHh---hC--CCCcEEEEeCCCCC--C-------------CCCCeEEcCCCCCHHHHHhh
Q 001947 223 VKLLILNFGGQPAG--W-KLKEE---YL--PSGWKCLVCGASDS--Q-------------LPPNFIKLPKDAYTPDFMAA 279 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~--~-~ll~~---l~--~~~~~~Vv~G~~~~--~-------------l~~nv~v~~f~~~~p~lL~a 279 (992)
.+.++++.|..... . .++++ +. .+++.+++.|.... . +.++|++.+ ..+++++|+.
T Consensus 292 ~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~l~IvG~g~~~~~~~~e~~~li~~l~l~~~V~f~G-~~~v~~~l~~ 370 (475)
T cd03813 292 EPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAEGWVIGPTDEDPEYAEECRELVESLGLEDNVKFTG-FQNVKEYLPK 370 (475)
T ss_pred CCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeEEEEECCCCcChHHHHHHHHHHHHhCCCCeEEEcC-CccHHHHHHh
Confidence 34567777877652 2 23332 21 25678888887631 0 357899999 5678899999
Q ss_pred cCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc------CcEEEEecCCCChhhHHHHHHHHhhC
Q 001947 280 SDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY------QGGVEMIRRDLLTGHWKPYLERAISL 349 (992)
Q Consensus 280 aDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~------G~Gi~v~~~~~~~~~l~~al~~ll~~ 349 (992)
+|++|..+ -.+++.|||++|+|+|+....+. .+.+++. ..|..++..+ ++.+.++|.+++++
T Consensus 371 aDv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~------~elv~~~~~~~~g~~G~lv~~~d--~~~la~ai~~ll~~ 442 (475)
T cd03813 371 LDVLVLTSISEGQPLVILEAMAAGIPVVATDVGSC------RELIEGADDEALGPAGEVVPPAD--PEALARAILRLLKD 442 (475)
T ss_pred CCEEEeCchhhcCChHHHHHHHcCCCEEECCCCCh------HHHhcCCcccccCCceEEECCCC--HHHHHHHHHHHhcC
Confidence 99999653 34689999999999999654332 3345542 3788887665 57899999999876
Q ss_pred CC
Q 001947 350 KP 351 (992)
Q Consensus 350 ~~ 351 (992)
+.
T Consensus 443 ~~ 444 (475)
T cd03813 443 PE 444 (475)
T ss_pred HH
Confidence 53
No 176
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.79 E-value=3.8e-05 Score=77.98 Aligned_cols=132 Identities=17% Similarity=0.119 Sum_probs=91.4
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHh---hC---CCCcEEEEeCCCCC-----------CCCCCeEEcCC
Q 001947 210 RKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEE---YL---PSGWKCLVCGASDS-----------QLPPNFIKLPK 269 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~---l~---~~~~~~Vv~G~~~~-----------~l~~nv~v~~f 269 (992)
++.++...+.+.++ .++++.|+.... ..+++. +. ...+.++++|.... .+..+++++++
T Consensus 2 ~~~~~~~~~~~~~~-~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~~~~~~~~~~~~~~~i~~~~~ 80 (172)
T PF00534_consen 2 KDKLREKLKIPDKK-KIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKKELKNLIEKLNLKENIIFLGY 80 (172)
T ss_dssp HHHHHHHTTT-TTS-EEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHHHHHHHHHHTTCGTTEEEEES
T ss_pred hHHHHHHcCCCCCC-eEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccccccccccccccccccccccc
Confidence 45667777765554 556677776653 223332 21 46778899993321 04678998887
Q ss_pred CC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 270 DA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 270 ~~--~~p~lL~aaDlvIt~----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.. .+..++..||++|+. +...++.||+++|+|+|+... ..+.+.+.....|..++.. +.+.+.++|
T Consensus 81 ~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~------~~~~e~~~~~~~g~~~~~~--~~~~l~~~i 152 (172)
T PF00534_consen 81 VPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMACGCPVIASDI------GGNNEIINDGVNGFLFDPN--DIEELADAI 152 (172)
T ss_dssp HSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHTT-EEEEESS------THHHHHSGTTTSEEEESTT--SHHHHHHHH
T ss_pred ccccccccccccceeccccccccccccccccccccccceeeccc------cCCceeeccccceEEeCCC--CHHHHHHHH
Confidence 76 567899999999976 455799999999999999753 2345667777789999876 468999999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.+++.++
T Consensus 153 ~~~l~~~ 159 (172)
T PF00534_consen 153 EKLLNDP 159 (172)
T ss_dssp HHHHHHH
T ss_pred HHHHCCH
Confidence 9998754
No 177
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only]
Probab=97.75 E-value=0.0021 Score=68.41 Aligned_cols=92 Identities=23% Similarity=0.343 Sum_probs=69.6
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEe
Q 001947 629 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMV 708 (992)
Q Consensus 629 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~ 708 (992)
.++.+.+.+++|+|+|+|-|+|...+.+.|++..++.+ .++.++.|+.+|-. .-+|+.|-.+.++||. .+.
T Consensus 73 ~~~~v~~~~~~P~G~G~G~Sga~AL~~Ala~a~~~~~~--~~~a~~~AH~aEV~---~gtGLGDVvAq~~GGl----ViR 143 (283)
T COG1829 73 DGVGVRIESPVPLGCGYGVSGAGALGTALALAEELGLG--EESAARIAHVAEVE---NGTGLGDVVAQYTGGL----VIR 143 (283)
T ss_pred cCcceEEEecCCCCcccchhHHHHHHHHHHHHhhcCCC--HHHHHHHHHHHHHH---cCCCchHHHHHhcCcE----EEE
Confidence 35789999999999999999999999999999999876 78899999998854 3457889999999993 333
Q ss_pred ecCc--cc--eeeecCCCCeEEEEEe
Q 001947 709 CQPA--EL--LGVVEIPSHIRFWGID 730 (992)
Q Consensus 709 ~~~~--~~--~~~v~~p~~~~~vl~d 730 (992)
.++. .+ ...++.|. ++++...
T Consensus 144 ~~pG~Pg~~~vd~Ip~~~-~~V~~~~ 168 (283)
T COG1829 144 VKPGGPGEGEVDRIPVPG-LRVITIS 168 (283)
T ss_pred ecCCCCCeEEEEEeecCC-ceEEEEE
Confidence 3432 11 13444443 6666553
No 178
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=97.72 E-value=1.3e-05 Score=78.62 Aligned_cols=33 Identities=30% Similarity=0.447 Sum_probs=27.2
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
+++...||++|+++|+++|+++||+|++++...
T Consensus 4 ~~~Gt~Ghv~P~lala~~L~~rGh~V~~~~~~~ 36 (139)
T PF03033_consen 4 ATGGTRGHVYPFLALARALRRRGHEVRLATPPD 36 (139)
T ss_dssp EEESSHHHHHHHHHHHHHHHHTT-EEEEEETGG
T ss_pred EEcCChhHHHHHHHHHHHHhccCCeEEEeeccc
Confidence 345557999999999999999999999887653
No 179
>PLN02949 transferase, transferring glycosyl groups
Probab=97.67 E-value=0.0057 Score=72.56 Aligned_cols=96 Identities=9% Similarity=-0.014 Sum_probs=65.2
Q ss_pred CCcEEEEeCCCC----C----C---------CCCCeEEcCCCC--CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcE
Q 001947 246 SGWKCLVCGASD----S----Q---------LPPNFIKLPKDA--YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPF 302 (992)
Q Consensus 246 ~~~~~Vv~G~~~----~----~---------l~~nv~v~~f~~--~~p~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~ 302 (992)
++++++++|... . + +.++|.+.++.+ +++++|+.||++|... |+ .++.|||++|+|+
T Consensus 302 ~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~~E~FGivvlEAMA~G~PV 381 (463)
T PLN02949 302 PRPKLQFVGSCRNKEDEERLQKLKDRAKELGLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMIDEHFGISVVEYMAAGAVP 381 (463)
T ss_pred CCcEEEEEeCCCCcccHHHHHHHHHHHHHcCCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCccCCCChHHHHHHHcCCcE
Confidence 467888887531 0 0 467899988874 4668999999999532 33 4899999999999
Q ss_pred EEEeCCCCCChHHHHHHHHH--cC-cEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 303 VFVRRDYFNEEPFLRNMLEF--YQ-GGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 303 V~iP~~~~~EQ~~NA~~le~--~G-~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
|+....+..+. .+.. .| .|...+ +++.|.++|.++++++
T Consensus 382 Ia~~~gGp~~e-----IV~~~~~g~tG~l~~----~~~~la~ai~~ll~~~ 423 (463)
T PLN02949 382 IAHNSAGPKMD-----IVLDEDGQQTGFLAT----TVEEYADAILEVLRMR 423 (463)
T ss_pred EEeCCCCCcce-----eeecCCCCcccccCC----CHHHHHHHHHHHHhCC
Confidence 99986543221 0111 12 354442 4688999999998753
No 180
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism]
Probab=97.60 E-value=0.013 Score=63.30 Aligned_cols=60 Identities=22% Similarity=0.226 Sum_probs=43.2
Q ss_pred CCCCchHHHHHHHHHHHHHHHhCC----------CCCH---HHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 642 GKGVSSSASVEVASMSAIAAAHGL----------NIHP---RDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 642 g~GLgSSAA~~va~~~al~~~~~~----------~l~~---~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
..|||||||++.++..++...+|. +++. +-+-.+||.+-....|.-...-|-.+++||..
T Consensus 152 KTGLGSSAam~T~lv~~ll~sl~~~~~d~~~k~~k~d~s~~~viHnlAQ~aHC~AQGKvGSGFDV~aA~yGS~ 224 (459)
T KOG4519|consen 152 KTGLGSSAAMTTALVAALLHSLGVVDLDDPCKEGKFDCSDLDVIHNLAQTAHCLAQGKVGSGFDVSAAVYGSQ 224 (459)
T ss_pred ccCccchHHHHHHHHHHHHHhhcceecCCCccccccCchHHHHHHHHHHHHHHHhcCCccCCcceehhhccce
Confidence 689999999999999888877754 1322 33456677665555665543469999999984
No 181
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.56 E-value=0.03 Score=63.18 Aligned_cols=243 Identities=15% Similarity=0.037 Sum_probs=132.3
Q ss_pred hHHHHHHHHHcCCCcEEEE--CC--CchHHHHHHHcCCcEEEEe--cC----chhH-HHHHHHhhhccchHHHHHHHHhh
Q 001947 106 ILKDEVEWLNSIKADLVVS--DV--VPVACRAAADAGIRSVCVT--NF----SWDF-IYAEYVMAAGHHHRSIVWQIAED 174 (992)
Q Consensus 106 ~l~~~~~~L~~~kPDlVVs--D~--~~~a~~aA~~~gIP~v~is--~~----~~~~-~~~~~~~~~~~~~~~i~~~l~~~ 174 (992)
.+...-+++.+.+||+|+. |. ..++.++|...+||+..+. .. .|+. +.+..+ ..++..
T Consensus 80 ~i~~~~~vl~~~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~~PEE~NR~l~-----------~~~S~~ 148 (383)
T COG0381 80 IIEGLSKVLEEEKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLYFPEEINRRLT-----------SHLSDL 148 (383)
T ss_pred HHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCCCCcHHHHHHHH-----------HHhhhh
Confidence 4555667889999999985 54 4456888899999998772 11 1332 222211 111110
Q ss_pred -ccc----cceeeecCCCCCCCCCCceeecCccccc----CC-CChHHHHHHhCCCCCCcEEEEEcCCCCC---h-hhHH
Q 001947 175 -YSH----CEFLIRLPGYCPMPAFRDVIDVPLVVRR----LH-KSRKEVRKELGIEDDVKLLILNFGGQPA---G-WKLK 240 (992)
Q Consensus 175 -y~~----~d~ll~~~~~~~~p~~~~v~~vp~~~~~----~~-~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~---~-~~ll 240 (992)
+.. .+.|++. ...+....+++.+.+... .. .........+-.+.+++++++++-.... + .++.
T Consensus 149 hfapte~ar~nLl~E---G~~~~~IfvtGnt~iDal~~~~~~~~~~~~~~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~ 225 (383)
T COG0381 149 HFAPTEIARKNLLRE---GVPEKRIFVTGNTVIDALLNTRDRVLEDSKILAKGLDDKDKKYILVTAHRRENVGEPLEEIC 225 (383)
T ss_pred hcCChHHHHHHHHHc---CCCccceEEeCChHHHHHHHHHhhhccchhhHHhhhccccCcEEEEEcchhhcccccHHHHH
Confidence 000 0011110 000111223444332210 00 0011122221123556789998754322 2 2333
Q ss_pred Hh---hC--CCCcEEEEeCCCCC---C-----C--CCCeEEcCCCCCHH--HHHhhcCEEEecCChhHHHHHHHcCCcEE
Q 001947 241 EE---YL--PSGWKCLVCGASDS---Q-----L--PPNFIKLPKDAYTP--DFMAASDCMLGKIGYGTVSEALAYKLPFV 303 (992)
Q Consensus 241 ~~---l~--~~~~~~Vv~G~~~~---~-----l--~~nv~v~~f~~~~p--~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V 303 (992)
++ +. .+++.++..-...+ + + .+++++++-.++.+ .+|..|-+++|-+| +-.-||-.+|+|++
T Consensus 226 ~al~~i~~~~~~~~viyp~H~~~~v~e~~~~~L~~~~~v~li~pl~~~~f~~L~~~a~~iltDSG-giqEEAp~lg~Pvl 304 (383)
T COG0381 226 EALREIAEEYPDVIVIYPVHPRPRVRELVLKRLKNVERVKLIDPLGYLDFHNLMKNAFLILTDSG-GIQEEAPSLGKPVL 304 (383)
T ss_pred HHHHHHHHhCCCceEEEeCCCChhhhHHHHHHhCCCCcEEEeCCcchHHHHHHHHhceEEEecCC-chhhhHHhcCCcEE
Confidence 32 11 13555544322111 1 2 34688776655544 78899999999999 78889999999999
Q ss_pred EEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCcc---------CCCCHHHHHHHHHHHHHc
Q 001947 304 FVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCYE---------GGINGGEVAAHILQETAI 372 (992)
Q Consensus 304 ~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~~---------~~~~G~~~aA~~I~~~~~ 372 (992)
++. ...|++. ..+.|.-+.+..+ .+.+.+++.++++++.-+. .+....++++++|+....
T Consensus 305 ~lR--~~TERPE----~v~agt~~lvg~~---~~~i~~~~~~ll~~~~~~~~m~~~~npYgdg~as~rIv~~l~~~~~ 373 (383)
T COG0381 305 VLR--DTTERPE----GVEAGTNILVGTD---EENILDAATELLEDEEFYERMSNAKNPYGDGNASERIVEILLNYFD 373 (383)
T ss_pred eec--cCCCCcc----ceecCceEEeCcc---HHHHHHHHHHHhhChHHHHHHhcccCCCcCcchHHHHHHHHHHHhh
Confidence 998 4557644 2334555555443 3678889999988754321 455567888888887653
No 182
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.35 E-value=0.00082 Score=77.25 Aligned_cols=120 Identities=13% Similarity=0.016 Sum_probs=85.1
Q ss_pred cEEEEEcCCCCCh---hhHHHh---hC--CCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEEE
Q 001947 224 KLLILNFGGQPAG---WKLKEE---YL--PSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCML 284 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~---~~ll~~---l~--~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlvI 284 (992)
+..+++.|..... ..+++. +. .+++.++++|..... ++.++.+.++.+.+..+|+.||++|
T Consensus 204 ~~~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad~~v 283 (372)
T cd04949 204 PHKIITVARLAPEKQLDQLIKAFAKVVKQVPDATLDIYGYGDEEEKLKELIEELGLEDYVFLKGYTRDLDEVYQKAQLSL 283 (372)
T ss_pred CCeEEEEEccCcccCHHHHHHHHHHHHHhCCCcEEEEEEeCchHHHHHHHHHHcCCcceEEEcCCCCCHHHHHhhhhEEE
Confidence 3456677776543 223332 21 256777877765421 4678889998888889999999999
Q ss_pred ecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 285 GKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 285 t~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
..+ ...++.|||++|+|+|+....... ...++....|..++..+ .+.|.++|.++++++
T Consensus 284 ~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~-----~~~v~~~~~G~lv~~~d--~~~la~~i~~ll~~~ 346 (372)
T cd04949 284 LTSQSEGFGLSLMEALSHGLPVISYDVNYGP-----SEIIEDGENGYLVPKGD--IEALAEAIIELLNDP 346 (372)
T ss_pred ecccccccChHHHHHHhCCCCEEEecCCCCc-----HHHcccCCCceEeCCCc--HHHHHHHHHHHHcCH
Confidence 644 245899999999999998754222 34466677898887655 578999999999765
No 183
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.27 E-value=0.002 Score=61.09 Aligned_cols=107 Identities=15% Similarity=0.141 Sum_probs=75.9
Q ss_pred EEEEcCCCCCh-hhHHH-----hhCCC--CcEEEEeCCCCCCCC-CCeEEcCCCC--CHHHHHhhcCEEEecCChhHHHH
Q 001947 226 LILNFGGQPAG-WKLKE-----EYLPS--GWKCLVCGASDSQLP-PNFIKLPKDA--YTPDFMAASDCMLGKIGYGTVSE 294 (992)
Q Consensus 226 Vlvs~Gg~~~~-~~ll~-----~l~~~--~~~~Vv~G~~~~~l~-~nv~v~~f~~--~~p~lL~aaDlvIt~~G~~Tv~E 294 (992)
++|+.|+.-.+ ..+.. .+... .-.++-.|+.... | .+.++++|.. .+..++..|.++|+|+|-||+..
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k-pvagl~v~~F~~~~kiQsli~darIVISHaG~GSIL~ 80 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIK-PVAGLRVYGFDKEEKIQSLIHDARIVISHAGEGSILL 80 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcc-cccccEEEeechHHHHHHHhhcceEEEeccCcchHHH
Confidence 68899987443 11111 12122 2234556875433 3 3467888763 45688899999999999999999
Q ss_pred HHHcCCcEEEEeCCC-C-----CChHHHHHHHHHcCcEEEEecCC
Q 001947 295 ALAYKLPFVFVRRDY-F-----NEEPFLRNMLEFYQGGVEMIRRD 333 (992)
Q Consensus 295 al~~GvP~V~iP~~~-~-----~EQ~~NA~~le~~G~Gi~v~~~~ 333 (992)
++-.++|.|++|+.. + ..|...|..+.+.++-+.+.+-+
T Consensus 81 ~~rl~kplIv~pr~s~y~elvDdHQvela~klae~~~vv~~spte 125 (161)
T COG5017 81 LLRLDKPLIVVPRSSQYQELVDDHQVELALKLAEINYVVACSPTE 125 (161)
T ss_pred HhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHhcCceEEEcCCc
Confidence 999999999999764 2 23677899999999999998644
No 184
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.01 E-value=0.0011 Score=64.40 Aligned_cols=115 Identities=21% Similarity=0.154 Sum_probs=68.8
Q ss_pred EEEEEcCCCCCh---hhHHH-h---hC--CCCcEEEEeCCCCCC---C-CCCeEEcCCCCCHHHHHhhcCEEEecC----
Q 001947 225 LLILNFGGQPAG---WKLKE-E---YL--PSGWKCLVCGASDSQ---L-PPNFIKLPKDAYTPDFMAASDCMLGKI---- 287 (992)
Q Consensus 225 ~Vlvs~Gg~~~~---~~ll~-~---l~--~~~~~~Vv~G~~~~~---l-~~nv~v~~f~~~~p~lL~aaDlvIt~~---- 287 (992)
++++++|+.... ..+++ . +. .+++.+.+.|...+. + .+|++++++++.++++|+.||++|...
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l~p~~~~~ 82 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNGPDELKRLRRPNVRFHGFVEELPEILAAADVGLIPSRFNE 82 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECESS-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEEE-BSS-S
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCCHHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEEEEeeCCC
Confidence 455667766542 22344 2 21 256788888875432 3 569999998876778999999999732
Q ss_pred C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhC
Q 001947 288 G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (992)
Q Consensus 288 G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~ 349 (992)
| .+++.|++++|+|+|+.+. . ....++..+.|..+ .. +++.|.++|.++++|
T Consensus 83 ~~~~k~~e~~~~G~pvi~~~~-~------~~~~~~~~~~~~~~-~~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 83 GFPNKLLEAMAAGKPVIASDN-G------AEGIVEEDGCGVLV-AN--DPEELAEAIERLLND 135 (135)
T ss_dssp CC-HHHHHHHCTT--EEEEHH-H------CHCHS---SEEEE--TT---HHHHHHHHHHHHH-
T ss_pred cCcHHHHHHHHhCCCEEECCc-c------hhhheeecCCeEEE-CC--CHHHHHHHHHHHhcC
Confidence 2 3789999999999999874 1 12234557888777 33 468999999998864
No 185
>PHA01633 putative glycosyl transferase group 1
Probab=96.98 E-value=0.0028 Score=71.55 Aligned_cols=137 Identities=12% Similarity=0.062 Sum_probs=83.9
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--h-hHHHh---hCC--C----CcEEEEeCCCC-C--CCCCCeEEcCC---C--
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG--W-KLKEE---YLP--S----GWKCLVCGASD-S--QLPPNFIKLPK---D-- 270 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~-~ll~~---l~~--~----~~~~Vv~G~~~-~--~l~~nv~v~~f---~-- 270 (992)
++++++++...+..+++++.|..... . .++++ +.. + ++.+++.|... . .+++++++.++ +
T Consensus 135 ~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~~~~~l~l~~~V~f~g~~G~~~~ 214 (335)
T PHA01633 135 PQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHKQFTQLEVPANVHFVAEFGHNSR 214 (335)
T ss_pred HHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHHHHHHcCCCCcEEEEecCCCCCH
Confidence 35666666442334566666776542 2 23332 221 2 24566666432 1 16778888743 3
Q ss_pred CCHHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCCh----------HHHHHHHH--HcCcEEEEecCCC
Q 001947 271 AYTPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEE----------PFLRNMLE--FYQGGVEMIRRDL 334 (992)
Q Consensus 271 ~~~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ----------~~NA~~le--~~G~Gi~v~~~~~ 334 (992)
+++++++++||++|..+ | ..++.|||++|+|+|+...++..|- ..++..+. ..|.|..++. .
T Consensus 215 ~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~--~ 292 (335)
T PHA01633 215 EYIFAFYGAMDFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHK--F 292 (335)
T ss_pred HHHHHHHHhCCEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecC--C
Confidence 35678999999999743 3 3689999999999999866544441 11222222 3567766653 4
Q ss_pred ChhhHHHHHHHHhhC
Q 001947 335 LTGHWKPYLERAISL 349 (992)
Q Consensus 335 ~~~~l~~al~~ll~~ 349 (992)
+++.|..+|.+++..
T Consensus 293 d~~~la~ai~~~~~~ 307 (335)
T PHA01633 293 QIEDMANAIILAFEL 307 (335)
T ss_pred CHHHHHHHHHHHHhc
Confidence 478899999988654
No 186
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=96.93 E-value=0.005 Score=73.77 Aligned_cols=120 Identities=11% Similarity=-0.016 Sum_probs=82.2
Q ss_pred CcEEEEEcCCCCCh---hhHHHhh-----CCCCcEEEEeCCCCCC-----------CCCCeEEcCCCCCHHHHHhhcCEE
Q 001947 223 VKLLILNFGGQPAG---WKLKEEY-----LPSGWKCLVCGASDSQ-----------LPPNFIKLPKDAYTPDFMAASDCM 283 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~~---~~ll~~l-----~~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~~p~lL~aaDlv 283 (992)
++.++++.|..... ..+++++ ..+++.+++.|.+... +.++|...|+. +++++++.||++
T Consensus 318 ~~~~il~vGrl~~~Kg~~~li~A~~~l~~~~p~~~l~i~G~G~~~~~l~~~i~~~~l~~~V~f~G~~-~~~~~~~~adv~ 396 (500)
T TIGR02918 318 KPFSIITASRLAKEKHIDWLVKAVVKAKKSVPELTFDIYGEGGEKQKLQKIINENQAQDYIHLKGHR-NLSEVYKDYELY 396 (500)
T ss_pred CCeEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEEEECchhHHHHHHHHHHcCCCCeEEEcCCC-CHHHHHHhCCEE
Confidence 34677788887663 2344432 1357788888865431 34678888976 678999999999
Q ss_pred EecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCC--CC----hhhHHHHHHHHhh
Q 001947 284 LGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD--LL----TGHWKPYLERAIS 348 (992)
Q Consensus 284 It~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~--~~----~~~l~~al~~ll~ 348 (992)
|..+ | ..+++|||+||+|+|+....+.. ...++....|..++..+ -. .+.+.++|.++++
T Consensus 397 v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~-----~eiI~~g~nG~lv~~~~~~~d~~~~~~~la~~I~~ll~ 466 (500)
T TIGR02918 397 LSASTSEGFGLTLMEAVGSGLGMIGFDVNYGN-----PTFIEDNKNGYLIPIDEEEDDEDQIITALAEKIVEYFN 466 (500)
T ss_pred EEcCccccccHHHHHHHHhCCCEEEecCCCCC-----HHHccCCCCEEEEeCCccccchhHHHHHHHHHHHHHhC
Confidence 9754 3 36999999999999998754222 33466666788887321 11 4678888888884
No 187
>PRK14098 glycogen synthase; Provisional
Probab=96.80 E-value=0.0082 Score=71.89 Aligned_cols=135 Identities=16% Similarity=0.037 Sum_probs=87.8
Q ss_pred hHHHHHHhCCCCC-CcEEEEEcCCCCCh--hh-HHH---hhCCCCcEEEEeCCCCC---C--------CCCCeEEcCCCC
Q 001947 210 RKEVRKELGIEDD-VKLLILNFGGQPAG--WK-LKE---EYLPSGWKCLVCGASDS---Q--------LPPNFIKLPKDA 271 (992)
Q Consensus 210 r~e~r~~l~~~~d-~~~Vlvs~Gg~~~~--~~-ll~---~l~~~~~~~Vv~G~~~~---~--------l~~nv~v~~f~~ 271 (992)
+..+++.+|++.+ ...++++.|..... .. +++ .+...++++++.|.+.. + .+.++.+.++.+
T Consensus 292 k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvivG~G~~~~~~~l~~l~~~~~~~V~~~g~~~ 371 (489)
T PRK14098 292 KKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVELDIQLVICGSGDKEYEKRFQDFAEEHPEQVSVQTEFT 371 (489)
T ss_pred HHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhcCcEEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEecC
Confidence 3456778888743 33466777776652 22 233 23345788888886542 1 467788776654
Q ss_pred C--HHHHHhhcCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 001947 272 Y--TPDFMAASDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (992)
Q Consensus 272 ~--~p~lL~aaDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ 345 (992)
. ++.+|++||+++..+ | ..+.+|||++|+|.|+....+..|... ...++.+.|..++..+ ++.+.++|.+
T Consensus 372 ~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~--~~~~~~~~G~l~~~~d--~~~la~ai~~ 447 (489)
T PRK14098 372 DAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIE--EVSEDKGSGFIFHDYT--PEALVAKLGE 447 (489)
T ss_pred HHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeee--cCCCCCCceeEeCCCC--HHHHHHHHHH
Confidence 3 468999999999644 2 258899999999999887655444310 1111246788887655 5788888888
Q ss_pred Hhh
Q 001947 346 AIS 348 (992)
Q Consensus 346 ll~ 348 (992)
++.
T Consensus 448 ~l~ 450 (489)
T PRK14098 448 ALA 450 (489)
T ss_pred HHH
Confidence 663
No 188
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=96.66 E-value=0.17 Score=57.68 Aligned_cols=82 Identities=12% Similarity=0.011 Sum_probs=58.8
Q ss_pred CeEEcCCCCCHHHHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChh
Q 001947 263 NFIKLPKDAYTPDFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTG 337 (992)
Q Consensus 263 nv~v~~f~~~~p~lL~aaDlvIt~-----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~ 337 (992)
++.+.+-...|-.++..+|+++-. -|+--..|.+++|+|+|.=|. .+-|...++.+++.|+++.++. .+
T Consensus 301 dV~l~DtmGEL~l~y~~adiAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~--~~Nf~ei~~~l~~~ga~~~v~~----~~ 374 (419)
T COG1519 301 DVLLGDTMGELGLLYGIADIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPY--TFNFSDIAERLLQAGAGLQVED----AD 374 (419)
T ss_pred cEEEEecHhHHHHHHhhccEEEECCcccCCCCCChhhHHHcCCCEEeCCc--cccHHHHHHHHHhcCCeEEECC----HH
Confidence 344443223455788999987741 133468899999999999774 4456788999999999999975 35
Q ss_pred hHHHHHHHHhhCC
Q 001947 338 HWKPYLERAISLK 350 (992)
Q Consensus 338 ~l~~al~~ll~~~ 350 (992)
.|..+++.+++++
T Consensus 375 ~l~~~v~~l~~~~ 387 (419)
T COG1519 375 LLAKAVELLLADE 387 (419)
T ss_pred HHHHHHHHhcCCH
Confidence 6677777777653
No 189
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=96.57 E-value=0.011 Score=69.36 Aligned_cols=122 Identities=11% Similarity=0.031 Sum_probs=79.1
Q ss_pred CCcEEEEEcCCCCCh---hhHHHh---hCC--C--CcEEEEeCCCCCC-----------CCCCeEEcCCCCC--HHHHHh
Q 001947 222 DVKLLILNFGGQPAG---WKLKEE---YLP--S--GWKCLVCGASDSQ-----------LPPNFIKLPKDAY--TPDFMA 278 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~---~~ll~~---l~~--~--~~~~Vv~G~~~~~-----------l~~nv~v~~f~~~--~p~lL~ 278 (992)
+.+..+++.|..... ..++++ +.. + ...+++.|.+... ...+|.+.|++++ +..+|+
T Consensus 228 ~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~~~l~~~~~~~~~~~~V~f~G~v~~~e~~~~~~ 307 (407)
T cd04946 228 DDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLEDTLKELAESKPENISVNFTGELSNSEVYKLYK 307 (407)
T ss_pred CCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHHHHHHHHHHhcCCCceEEEecCCChHHHHHHHh
Confidence 345667778876653 223333 211 2 3445566654321 2356888998863 557776
Q ss_pred h--cCEEEecC---C-hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 279 A--SDCMLGKI---G-YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 279 a--aDlvIt~~---G-~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
. +|++|..+ | .++++|||++|+|+|+....+.. +.+.+.+.|..+...+ +++.+.++|.++++++
T Consensus 308 ~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~------e~i~~~~~G~l~~~~~-~~~~la~~I~~ll~~~ 378 (407)
T cd04946 308 ENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTP------EIVDNGGNGLLLSKDP-TPNELVSSLSKFIDNE 378 (407)
T ss_pred hcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcH------HHhcCCCcEEEeCCCC-CHHHHHHHHHHHHhCH
Confidence 4 78888544 2 46899999999999997754433 3466656898887532 3688999999998754
No 190
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.42 E-value=0.13 Score=58.40 Aligned_cols=109 Identities=13% Similarity=0.045 Sum_probs=70.5
Q ss_pred EEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCCC--CCCCeEEcCCCC--CHHHHHhhcCEEEecC--------------
Q 001947 226 LILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ--LPPNFIKLPKDA--YTPDFMAASDCMLGKI-------------- 287 (992)
Q Consensus 226 Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~~--l~~nv~v~~f~~--~~p~lL~aaDlvIt~~-------------- 287 (992)
+++..|+.+.. ..+... .+++.++++|.+... ..+||++.|+.+ .++.+|+..-.+|.-.
T Consensus 171 ~i~yaG~l~k~-~~l~~~-~~~~~l~i~G~g~~~~~~~~~V~f~G~~~~eel~~~l~~~~gLv~~~~~~~~~~~~y~~~~ 248 (333)
T PRK09814 171 KINFAGNLEKS-PFLKNW-SQGIKLTVFGPNPEDLENSANISYKGWFDPEELPNELSKGFGLVWDGDTNDGEYGEYYKYN 248 (333)
T ss_pred eEEEecChhhc-hHHHhc-CCCCeEEEECCCccccccCCCeEEecCCCHHHHHHHHhcCcCeEEcCCCCCccchhhhhcc
Confidence 55666777642 233222 245778888876542 567999998875 3556776622222211
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHH
Q 001947 288 GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERA 346 (992)
Q Consensus 288 G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~l 346 (992)
-.+-+.|.|++|+|+|+.+. ...++.+++.++|+.++ + .+++.+.+.++
T Consensus 249 ~P~K~~~ymA~G~PVI~~~~------~~~~~~V~~~~~G~~v~--~--~~el~~~l~~~ 297 (333)
T PRK09814 249 NPHKLSLYLAAGLPVIVWSK------AAIADFIVENGLGFVVD--S--LEELPEIIDNI 297 (333)
T ss_pred chHHHHHHHHCCCCEEECCC------ccHHHHHHhCCceEEeC--C--HHHHHHHHHhc
Confidence 11247889999999999652 34577899999999997 2 35666666664
No 191
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=96.40 E-value=1.2 Score=49.93 Aligned_cols=97 Identities=16% Similarity=0.018 Sum_probs=60.7
Q ss_pred CCeEEcCCC--CCHHHHHhhcCEEEecCChh-HHHHHHHcCCcEEEEeCCCCCCh-HHHHHHHHHcCcEEEEecCCCChh
Q 001947 262 PNFIKLPKD--AYTPDFMAASDCMLGKIGYG-TVSEALAYKLPFVFVRRDYFNEE-PFLRNMLEFYQGGVEMIRRDLLTG 337 (992)
Q Consensus 262 ~nv~v~~f~--~~~p~lL~aaDlvIt~~G~~-Tv~Eal~~GvP~V~iP~~~~~EQ-~~NA~~le~~G~Gi~v~~~~~~~~ 337 (992)
+.+.+.+.. .+...+|+.||.+|..+-.- -++||++.|+|+.+++.+..... ..-.+.|++.|+-..++...-.
T Consensus 209 ~~~~~~~~~~~nPy~~~La~ad~i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~~g~~r~~~~~~~~-- 286 (311)
T PF06258_consen 209 PGVYIWDGTGENPYLGFLAAADAIVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEERGAVRPFTGWRDL-- 286 (311)
T ss_pred CceEEecCCCCCcHHHHHHhCCEEEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHHCCCEEECCCcccc--
Confidence 445444333 24569999999999887654 58899999999999997652221 1133556666766555432100
Q ss_pred hHHHHHHHHhhCCCCccCCCCHHHHHHHHHHHHH
Q 001947 338 HWKPYLERAISLKPCYEGGINGGEVAAHILQETA 371 (992)
Q Consensus 338 ~l~~al~~ll~~~~~~~~~~~G~~~aA~~I~~~~ 371 (992)
. . +....+-|-++++|++|.+.+
T Consensus 287 --~----~-----~~~~~pl~et~r~A~~i~~r~ 309 (311)
T PF06258_consen 287 --E----Q-----WTPYEPLDETDRVAAEIRERL 309 (311)
T ss_pred --c----c-----cccCCCccHHHHHHHHHHHHh
Confidence 0 0 111235677888888887643
No 192
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=95.65 E-value=1.3 Score=47.39 Aligned_cols=85 Identities=19% Similarity=0.149 Sum_probs=51.6
Q ss_pred HHHHhhcCEEEecCCh-hHHHHHHHcCCcEEEEeCCCCCChH--HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 274 PDFMAASDCMLGKIGY-GTVSEALAYKLPFVFVRRDYFNEEP--FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 274 p~lL~aaDlvIt~~G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~--~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+++|++||.+|+.+-. |.++||++.|+|+-+.-.+.++--. .=.+.|++.+++...+...+ ++ .
T Consensus 239 ~~~La~Adyii~TaDSinM~sEAasTgkPv~~~~~~~~~s~K~r~Fi~~L~eq~~AR~f~~~~~-------~~------e 305 (329)
T COG3660 239 IDMLAAADYIISTADSINMCSEAASTGKPVFILEPPNFNSLKFRIFIEQLVEQKIARPFEGSNL-------AL------E 305 (329)
T ss_pred HHHHhhcceEEEecchhhhhHHHhccCCCeEEEecCCcchHHHHHHHHHHHHhhhccccCcchh-------hh------c
Confidence 3899999999987764 4578999999999988655442110 01122333333322221110 11 1
Q ss_pred CCccCCCCHHHHHHHHHHHHH
Q 001947 351 PCYEGGINGGEVAAHILQETA 371 (992)
Q Consensus 351 ~~~~~~~~G~~~aA~~I~~~~ 371 (992)
++...+.+-++++|++|...+
T Consensus 306 ~ysy~PLnEt~RiA~~Ira~l 326 (329)
T COG3660 306 EYSYKPLNETERIAEEIRAEL 326 (329)
T ss_pred ccccCCchHHHHHHHHHHHHh
Confidence 123357888999999998764
No 193
>PHA01630 putative group 1 glycosyl transferase
Probab=95.56 E-value=0.073 Score=60.46 Aligned_cols=91 Identities=13% Similarity=-0.034 Sum_probs=53.7
Q ss_pred CcEEEEEcCCCCC--hh-hHHHh---hC--CCCcEEEEeCCCCCCC-CCCeE-EcCCC--CCHHHHHhhcCEEEecC---
Q 001947 223 VKLLILNFGGQPA--GW-KLKEE---YL--PSGWKCLVCGASDSQL-PPNFI-KLPKD--AYTPDFMAASDCMLGKI--- 287 (992)
Q Consensus 223 ~~~Vlvs~Gg~~~--~~-~ll~~---l~--~~~~~~Vv~G~~~~~l-~~nv~-v~~f~--~~~p~lL~aaDlvIt~~--- 287 (992)
.+++++..|.... +. .++++ +. ..++.+++.|....+. -.++. +.++. ++++++|+.||++|..+
T Consensus 141 ~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~llivG~~~~~~~l~~~~~~~~~v~~~~l~~~y~~aDv~v~pS~~E 220 (331)
T PHA01630 141 HPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFYFLIKSSNMLDPRLFGLNGVKTPLPDDDIYSLFAGCDILFYPVRGG 220 (331)
T ss_pred CCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEEEEEEeCcccchhhccccceeccCCHHHHHHHHHhCCEEEECCccc
Confidence 3555555555433 22 23333 22 2467778888543221 01111 11222 35678999999999532
Q ss_pred -ChhHHHHHHHcCCcEEEEeCCCCCCh
Q 001947 288 -GYGTVSEALAYKLPFVFVRRDYFNEE 313 (992)
Q Consensus 288 -G~~Tv~Eal~~GvP~V~iP~~~~~EQ 313 (992)
...++.|||+||+|+|+....+..|.
T Consensus 221 ~fgl~~lEAMA~G~PVIas~~gg~~E~ 247 (331)
T PHA01630 221 AFEIPVIEALALGLDVVVTEKGAWSEW 247 (331)
T ss_pred cCChHHHHHHHcCCCEEEeCCCCchhh
Confidence 24689999999999999986555554
No 194
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=94.49 E-value=0.69 Score=49.41 Aligned_cols=149 Identities=19% Similarity=0.242 Sum_probs=81.6
Q ss_pred HHHHHHHcCCCcEEE-ECCCchH------HHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhcccccee
Q 001947 109 DEVEWLNSIKADLVV-SDVVPVA------CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFL 181 (992)
Q Consensus 109 ~~~~~L~~~kPDlVV-sD~~~~a------~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~d~l 181 (992)
...++|++.+.|+|| ..|+|++ +.+|+..|||++.+....|... .+
T Consensus 57 ~l~~~l~e~~i~llIDATHPyAa~iS~Na~~aake~gipy~r~eRP~~~~~-------------------------gd-- 109 (257)
T COG2099 57 GLAAFLREEGIDLLIDATHPYAARISQNAARAAKETGIPYLRLERPPWAPN-------------------------GD-- 109 (257)
T ss_pred HHHHHHHHcCCCEEEECCChHHHHHHHHHHHHHHHhCCcEEEEECCccccC-------------------------CC--
Confidence 346788999999999 5666653 4577889999998754443210 00
Q ss_pred eecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCC---
Q 001947 182 IRLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDS--- 258 (992)
Q Consensus 182 l~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~--- 258 (992)
+.+.++ +-+++-+... +-.+.||++.|+.... .|........|.+.+.-....
T Consensus 110 -------------~~~~V~--------d~~ea~~~~~--~~~~rVflt~G~~~l~-~f~~~~~~~~~~~Rvlp~~~~~~~ 165 (257)
T COG2099 110 -------------NWIEVA--------DIEEAAEAAK--QLGRRVFLTTGRQNLA-HFVAADAHSHVLARVLPPPDVLAK 165 (257)
T ss_pred -------------ceEEec--------CHHHHHHHHh--ccCCcEEEecCccchH-HHhcCcccceEEEEEcCchHHHHH
Confidence 111111 0112211111 1114688999876653 222111112233323321111
Q ss_pred --C--CC-CCeEEc--CCCCCHH-HHHh--hcCEEEecCChh------HHHHHHHcCCcEEEEeCC
Q 001947 259 --Q--LP-PNFIKL--PKDAYTP-DFMA--ASDCMLGKIGYG------TVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 259 --~--l~-~nv~v~--~f~~~~p-~lL~--aaDlvIt~~G~~------Tv~Eal~~GvP~V~iP~~ 308 (992)
+ +| .++.-. ||...+. .+|. .+|++||+--++ -+.-|..+|+|+|+|.++
T Consensus 166 ~~~~~~p~~~Iia~~GPfs~~~n~all~q~~id~vItK~SG~~Gg~~~Ki~aA~eLgi~VI~I~Rp 231 (257)
T COG2099 166 CEDLGVPPARIIAMRGPFSEEDNKALLEQYRIDVVVTKNSGGAGGTYEKIEAARELGIPVIMIERP 231 (257)
T ss_pred HHhcCCChhhEEEecCCcChHHHHHHHHHhCCCEEEEccCCcccCcHHHHHHHHHcCCcEEEEecC
Confidence 1 23 334433 6665554 4553 599999974323 367789999999999987
No 195
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=94.31 E-value=2.9 Score=47.34 Aligned_cols=95 Identities=16% Similarity=0.362 Sum_probs=59.6
Q ss_pred HHHHhCCCCCCcEEEEEcCCC-CC-h-h------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeE-EcCCCC--
Q 001947 213 VRKELGIEDDVKLLILNFGGQ-PA-G-W------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFI-KLPKDA-- 271 (992)
Q Consensus 213 ~r~~l~~~~d~~~Vlvs~Gg~-~~-~-~------~ll~~l~~~~~~~Vv~G~~~~~---------l~~nv~-v~~f~~-- 271 (992)
+...++++.++++|.+..|+. +. . | ++.+.+...++.+++.|...+. .+.++. ..+..+
T Consensus 164 ~~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~G~~~e~~~~~~i~~~~~~~~~~l~g~~sL~ 243 (334)
T TIGR02195 164 ALAKFGLDTERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLFGSAKDHPAGNEIEALLPGELRNLAGETSLD 243 (334)
T ss_pred HHHHcCCCCCCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEEEChhhHHHHHHHHHhCCcccccCCCCCCHH
Confidence 445566666788888888774 33 2 2 2333444446777777754331 233332 223221
Q ss_pred CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCC
Q 001947 272 YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
.+..+|+.||++||.=. +.+.=|.+.|+|+|.+=.+
T Consensus 244 el~ali~~a~l~I~~DS-Gp~HlAaA~~~P~i~lfG~ 279 (334)
T TIGR02195 244 EAVDLIALAKAVVTNDS-GLMHVAAALNRPLVALYGS 279 (334)
T ss_pred HHHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEECC
Confidence 23478899999998543 6889999999999998533
No 196
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=93.55 E-value=4.6 Score=45.44 Aligned_cols=125 Identities=18% Similarity=0.169 Sum_probs=67.7
Q ss_pred hCCCCCCcEEEEEcCCCCC-h-h------hHHHhhCCCCcEEEEe-CCCCC-C----C---CCCeEEcCCCCCHH---HH
Q 001947 217 LGIEDDVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVC-GASDS-Q----L---PPNFIKLPKDAYTP---DF 276 (992)
Q Consensus 217 l~~~~d~~~Vlvs~Gg~~~-~-~------~ll~~l~~~~~~~Vv~-G~~~~-~----l---~~nv~v~~f~~~~p---~l 276 (992)
++...+++.|++..|+... . | ++.+.+...++.+|++ |...+ + + .++..+.+.. .++ .+
T Consensus 173 ~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~~~~~~i~~~~~~~~l~g~~-sL~el~al 251 (319)
T TIGR02193 173 LGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEKQRAERIAEALPGAVVLPKM-SLAEVAAL 251 (319)
T ss_pred hhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHHHHHHHHHhhCCCCeecCCC-CHHHHHHH
Confidence 3333456677666665333 2 2 2333454446777765 53322 1 1 1233344433 344 68
Q ss_pred HhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE--ecCCCChhhHHHHHHHHh
Q 001947 277 MAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM--IRRDLLTGHWKPYLERAI 347 (992)
Q Consensus 277 L~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v--~~~~~~~~~l~~al~~ll 347 (992)
++.||++||. -.+.+.=|.+.|+|+|.+=.+....+.. - . .....+.. ..++++++++.++++++|
T Consensus 252 i~~a~l~I~~-DSgp~HlAaa~g~P~i~lfg~t~p~~~~--P-~-~~~~~~~~~~~~~~I~~~~V~~ai~~~~ 319 (319)
T TIGR02193 252 LAGADAVVGV-DTGLTHLAAALDKPTVTLYGATDPGRTG--G-Y-GKPNVALLGESGANPTPDEVLAALEELL 319 (319)
T ss_pred HHcCCEEEeC-CChHHHHHHHcCCCEEEEECCCCHhhcc--c-C-CCCceEEccCccCCCCHHHHHHHHHhhC
Confidence 8899999994 3478999999999999985332221100 0 0 00111111 245778888888887764
No 197
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=93.30 E-value=5.4 Score=45.56 Aligned_cols=93 Identities=15% Similarity=0.270 Sum_probs=56.2
Q ss_pred HHHhCCCCCCcEEEEEcCCC-C-Ch-h------hHHHhhCCCCcEEEEeCCCCCC---------CCC----Ce-EEcCCC
Q 001947 214 RKELGIEDDVKLLILNFGGQ-P-AG-W------KLKEEYLPSGWKCLVCGASDSQ---------LPP----NF-IKLPKD 270 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~-~-~~-~------~ll~~l~~~~~~~Vv~G~~~~~---------l~~----nv-~v~~f~ 270 (992)
.+.+++..++++|.+..|+. + .. | ++.+.+...++.++++|...+. ++. ++ ...+..
T Consensus 171 ~~~~~~~~~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~~~~~i~~~~~~~~~~~~~~l~g~~ 250 (348)
T PRK10916 171 CAAFSLSSERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAGET 250 (348)
T ss_pred HHHcCCCCCCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHHHHHHHHHhcccccccceeeccCCC
Confidence 34445545678888888764 2 22 2 2333444456777777654321 221 22 223322
Q ss_pred C--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 001947 271 A--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 271 ~--~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~ 307 (992)
+ .+..+|+.||++||. -.|.+.=|.+.|+|+|.+=-
T Consensus 251 sL~el~ali~~a~l~I~n-DTGp~HlAaA~g~P~valfG 288 (348)
T PRK10916 251 QLEQAVILIAACKAIVTN-DSGLMHVAAALNRPLVALYG 288 (348)
T ss_pred CHHHHHHHHHhCCEEEec-CChHHHHHHHhCCCEEEEEC
Confidence 1 233688899999984 33789999999999999853
No 198
>PF08660 Alg14: Oligosaccharide biosynthesis protein Alg14 like; InterPro: IPR013969 Alg14 is involved dolichol-linked oligosaccharide biosynthesis and anchors the catalytic subunit Alg13 to the ER membrane [].
Probab=92.69 E-value=0.79 Score=46.72 Aligned_cols=40 Identities=20% Similarity=0.376 Sum_probs=30.3
Q ss_pred HHHHHHHcCCCcEEEECC---CchHHHHHHHc------CCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDV---VPVACRAAADA------GIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~---~~~a~~aA~~~------gIP~v~is~~~ 148 (992)
....++.+.|||+||+.- ..+.+++++.+ |.++|.+..+.
T Consensus 83 ~~~~il~r~rPdvii~nGpg~~vp~~~~~~l~~~~~~~~~kiIyIES~a 131 (170)
T PF08660_consen 83 QSLRILRRERPDVIISNGPGTCVPVCLAAKLLRLLGLRGSKIIYIESFA 131 (170)
T ss_pred HHHHHHHHhCCCEEEEcCCceeeHHHHHHHHHHHhhccCCcEEEEEeee
Confidence 445677889999999875 34456788888 99999985543
No 199
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=92.59 E-value=16 Score=41.85 Aligned_cols=85 Identities=9% Similarity=0.222 Sum_probs=51.4
Q ss_pred CCcEEEEEcCCCCC-h-h------hHHHhhCCCCcEEEEeC-CCCCC------C----C-CCe-EEcCCCC--CHHHHHh
Q 001947 222 DVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVCG-ASDSQ------L----P-PNF-IKLPKDA--YTPDFMA 278 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~-~-~------~ll~~l~~~~~~~Vv~G-~~~~~------l----~-~nv-~v~~f~~--~~p~lL~ 278 (992)
++++|++..|+... . | ++.+.|...++.+++.| +...+ + . .++ ...+..+ .+..+|+
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 261 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKTTFPELGALID 261 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHHHHHHHHHHhcCCCccccccCCCCHHHHHHHHH
Confidence 35677777776433 2 2 23334544567777664 43221 1 1 122 2334332 2347889
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 001947 279 ASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 279 aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~ 307 (992)
.||++||.=. |.+.=|.++|+|+|.+=-
T Consensus 262 ~a~l~v~nDS-Gp~HlAaA~g~P~v~lfG 289 (352)
T PRK10422 262 HAQLFIGVDS-APAHIAAAVNTPLICLFG 289 (352)
T ss_pred hCCEEEecCC-HHHHHHHHcCCCEEEEEC
Confidence 9999999544 789999999999999853
No 200
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=92.43 E-value=1.4 Score=42.73 Aligned_cols=100 Identities=13% Similarity=0.110 Sum_probs=56.0
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (992)
||+|+.... ..| ...+++.|.++|++|++++..... ........+.+... ..+ ... ...+.
T Consensus 1 KIl~i~~~~-~~~---~~~~~~~L~~~g~~V~ii~~~~~~--~~~~~~~~i~~~~~--~~~--------~k~---~~~~~ 61 (139)
T PF13477_consen 1 KILLIGNTP-STF---IYNLAKELKKRGYDVHIITPRNDY--EKYEIIEGIKVIRL--PSP--------RKS---PLNYI 61 (139)
T ss_pred CEEEEecCc-HHH---HHHHHHHHHHCCCEEEEEEcCCCc--hhhhHhCCeEEEEe--cCC--------CCc---cHHHH
Confidence 355554433 344 567899999999999999875432 11111122222221 000 000 11111
Q ss_pred HHhhccHHHhHHHHHHHHHcCCCcEEEECC-Cc---hHHHHHHHcC-CcEEEE
Q 001947 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV-VP---VACRAAADAG-IRSVCV 144 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~---~a~~aA~~~g-IP~v~i 144 (992)
. +.+..+++++.+||+|++.. .+ .+.++++..+ +|.+..
T Consensus 62 ~---------~~~l~k~ik~~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~ 105 (139)
T PF13477_consen 62 K---------YFRLRKIIKKEKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYT 105 (139)
T ss_pred H---------HHHHHHHhccCCCCEEEEecCChHHHHHHHHHHHcCCCCEEEE
Confidence 1 12457788999999999776 32 2445667788 888754
No 201
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=92.23 E-value=20 Score=39.07 Aligned_cols=49 Identities=18% Similarity=0.236 Sum_probs=32.0
Q ss_pred CCCeEEc--CCCCCHH-HHHh--hcCEEEecC--Chh----HHHHHHHcCCcEEEEeCCC
Q 001947 261 PPNFIKL--PKDAYTP-DFMA--ASDCMLGKI--GYG----TVSEALAYKLPFVFVRRDY 309 (992)
Q Consensus 261 ~~nv~v~--~f~~~~p-~lL~--aaDlvIt~~--G~~----Tv~Eal~~GvP~V~iP~~~ 309 (992)
+.|+... ||...+. .+++ .+|++||+- |.| -+.-|..+|+|+|+|.+|.
T Consensus 174 ~~~iia~~gPfs~e~n~al~~~~~i~~lVtK~SG~~Gg~~eKi~AA~~lgi~vivI~RP~ 233 (256)
T TIGR00715 174 SDRIIAMRGPFSEELEKALLREYRIDAVVTKASGEQGGELEKVKAAEALGINVIRIARPQ 233 (256)
T ss_pred hhcEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCCccchHHHHHHHHHcCCcEEEEeCCC
Confidence 3455432 5554343 5665 499999963 221 2556888899999999875
No 202
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=91.81 E-value=0.16 Score=51.69 Aligned_cols=40 Identities=25% Similarity=0.292 Sum_probs=28.7
Q ss_pred HHHHHHHHcCCCcEEEECCCchHHH-HH-----HHc-CCcEEEE-ecC
Q 001947 108 KDEVEWLNSIKADLVVSDVVPVACR-AA-----ADA-GIRSVCV-TNF 147 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~~~a~~-aA-----~~~-gIP~v~i-s~~ 147 (992)
++..++|++.+||+||+.|++++.. ++ ... ++|++++ |||
T Consensus 79 ~~l~~~l~~~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvvTD~ 126 (169)
T PF06925_consen 79 RRLIRLLREFQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVVTDF 126 (169)
T ss_pred HHHHHHHhhcCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEEcCC
Confidence 4567889999999999999765444 32 223 5888765 887
No 203
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=91.61 E-value=17 Score=41.41 Aligned_cols=85 Identities=22% Similarity=0.423 Sum_probs=55.9
Q ss_pred CcEEEEEcC-CCCCh--h------hHHHhhCCCCcEEEEeCCCCCC---------CCCCeEEcCCCC--CHHHHHhhcCE
Q 001947 223 VKLLILNFG-GQPAG--W------KLKEEYLPSGWKCLVCGASDSQ---------LPPNFIKLPKDA--YTPDFMAASDC 282 (992)
Q Consensus 223 ~~~Vlvs~G-g~~~~--~------~ll~~l~~~~~~~Vv~G~~~~~---------l~~nv~v~~f~~--~~p~lL~aaDl 282 (992)
+|.|++..| +.+.. | ++.+.+...+++++++|...+. .+..+.+.+..+ .+..+++.||+
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~~e~e~~~~i~~~~~~~~~l~~k~sL~e~~~li~~a~l 254 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGPDEEERAEEIAKGLPNAVILAGKTSLEELAALIAGADL 254 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecChHHHHHHHHHHHhcCCccccCCCCCHHHHHHHHhcCCE
Confidence 688888888 55332 2 3344455556888888866431 122222444432 34478889999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCC
Q 001947 283 MLGKIGYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 283 vIt~~G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
|||.=. |-+.=|.+.|+|+|.+-.+
T Consensus 255 ~I~~DS-g~~HlAaA~~~P~I~iyg~ 279 (334)
T COG0859 255 VIGNDS-GPMHLAAALGTPTIALYGP 279 (334)
T ss_pred EEccCC-hHHHHHHHcCCCEEEEECC
Confidence 998544 7899999999999998633
No 204
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=91.51 E-value=0.38 Score=56.53 Aligned_cols=114 Identities=15% Similarity=0.125 Sum_probs=56.7
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCCh-hhHHH---hhC--CCCcEEE-EeCCCCCC-----------C-CCCeEEcCCCCCH
Q 001947 213 VRKELGIEDDVKLLILNFGGQPAG-WKLKE---EYL--PSGWKCL-VCGASDSQ-----------L-PPNFIKLPKDAYT 273 (992)
Q Consensus 213 ~r~~l~~~~d~~~Vlvs~Gg~~~~-~~ll~---~l~--~~~~~~V-v~G~~~~~-----------l-~~nv~v~~f~~~~ 273 (992)
.|+.+|++.+. ++|.+|.....- .+.++ +++ -++-+++ ...+...+ + ++.+.+.+..+ .
T Consensus 275 ~R~~~gLp~d~-vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~~~l~~~~~~~Gv~~~Ri~f~~~~~-~ 352 (468)
T PF13844_consen 275 TRAQYGLPEDA-VVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGEARLRRRFAAHGVDPDRIIFSPVAP-R 352 (468)
T ss_dssp ETGGGT--SSS-EEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHHHHHHHHHHHTTS-GGGEEEEE----H
T ss_pred CHHHcCCCCCc-eEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHHHHHHHHHHHcCCChhhEEEcCCCC-H
Confidence 35678998664 788888654331 12222 111 1333443 33332211 2 45576665443 2
Q ss_pred HHH---HhhcCEEEe---cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEE
Q 001947 274 PDF---MAASDCMLG---KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEM 329 (992)
Q Consensus 274 p~l---L~aaDlvIt---~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v 329 (992)
.++ +..+|+++= ..|.+|++|||++|||+|..+-..+.. ..-+..|...|+...+
T Consensus 353 ~ehl~~~~~~DI~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~s-R~~aSiL~~lGl~ElI 413 (468)
T PF13844_consen 353 EEHLRRYQLADICLDTFPYNGGTTTLDALWMGVPVVTLPGETMAS-RVGASILRALGLPELI 413 (468)
T ss_dssp HHHHHHGGG-SEEE--SSS--SHHHHHHHHHT--EEB---SSGGG-SHHHHHHHHHT-GGGB
T ss_pred HHHHHHhhhCCEEeeCCCCCCcHHHHHHHHcCCCEEeccCCCchh-HHHHHHHHHcCCchhc
Confidence 344 466999994 357799999999999999999544433 3567788888887444
No 205
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=91.51 E-value=0.37 Score=57.17 Aligned_cols=68 Identities=19% Similarity=0.180 Sum_probs=53.0
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~---G~~-Tv~Eal~~GvP----~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.++.+|++||+++..+ |+| ++.|+++||+| +|+-...+..++ + +.|+.+++.+ ++.+.++|
T Consensus 348 el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~------l---~~gllVnP~d--~~~lA~aI 416 (456)
T TIGR02400 348 ELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQE------L---NGALLVNPYD--IDGMADAI 416 (456)
T ss_pred HHHHHHHhCcEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHH------h---CCcEEECCCC--HHHHHHHH
Confidence 4668899999999755 654 78899999999 888776555544 3 2578888766 57899999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.++++++
T Consensus 417 ~~aL~~~ 423 (456)
T TIGR02400 417 ARALTMP 423 (456)
T ss_pred HHHHcCC
Confidence 9999765
No 206
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=91.49 E-value=3.3 Score=46.30 Aligned_cols=68 Identities=19% Similarity=0.194 Sum_probs=50.8
Q ss_pred CCcEEEEeCCCCCC-----------CCCCeEEcCCCC--CHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCC
Q 001947 246 SGWKCLVCGASDSQ-----------LPPNFIKLPKDA--YTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRD 308 (992)
Q Consensus 246 ~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~--~~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~ 308 (992)
++.+|++.|.++.. +.+.+..++-++ .+-+.|..-|+|+..+ =..++.||+.||+|+|.....
T Consensus 225 p~vrfii~GDGPk~i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~IFlntSlTEafc~~ivEAaScGL~VVsTrVG 304 (426)
T KOG1111|consen 225 PEVRFIIIGDGPKRIDLEEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDIFLNTSLTEAFCMVIVEAASCGLPVVSTRVG 304 (426)
T ss_pred CCeeEEEecCCcccchHHHHHHHhhccCceEEecccchHHHHHHHhcCcEEeccHHHHHHHHHHHHHHhCCCEEEEeecC
Confidence 57788888876531 467777777653 4568999999999644 225788999999999998876
Q ss_pred CCCCh
Q 001947 309 YFNEE 313 (992)
Q Consensus 309 ~~~EQ 313 (992)
+-+|-
T Consensus 305 GIpeV 309 (426)
T KOG1111|consen 305 GIPEV 309 (426)
T ss_pred Ccccc
Confidence 66654
No 207
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=91.27 E-value=25 Score=38.19 Aligned_cols=153 Identities=18% Similarity=0.141 Sum_probs=80.7
Q ss_pred HHHHHHcCCCcEEE-ECCCchH------HHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHhhccccceee
Q 001947 110 EVEWLNSIKADLVV-SDVVPVA------CRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAEDYSHCEFLI 182 (992)
Q Consensus 110 ~~~~L~~~kPDlVV-sD~~~~a------~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~~y~~~d~ll 182 (992)
..++|++.++|+|| ..|+|+. ..+++.+|||++.+..-.|.. ...+
T Consensus 58 l~~~l~~~~i~~vIDATHPfA~~is~na~~a~~~~~ipylR~eRp~~~~------------------------~~~~--- 110 (249)
T PF02571_consen 58 LAEFLRENGIDAVIDATHPFAAEISQNAIEACRELGIPYLRFERPSWQP------------------------EPDD--- 110 (249)
T ss_pred HHHHHHhCCCcEEEECCCchHHHHHHHHHHHHhhcCcceEEEEcCCccc------------------------CCCC---
Confidence 35678899999999 6676653 456788899999873322210 0000
Q ss_pred ecCCCCCCCCCCceeecCcccccCCCChHHHHHHhCCCCCCcEEEEEcCCCCChhhHHH-hhCCCCcEEEEe-CCCCCC-
Q 001947 183 RLPGYCPMPAFRDVIDVPLVVRRLHKSRKEVRKELGIEDDVKLLILNFGGQPAGWKLKE-EYLPSGWKCLVC-GASDSQ- 259 (992)
Q Consensus 183 ~~~~~~~~p~~~~v~~vp~~~~~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~-~l~~~~~~~Vv~-G~~~~~- 259 (992)
+.+.+. +-+++-+.+.- .+...||++.|+.... .+.. ......+.+.+. -+....
T Consensus 111 ------------~~~~v~--------~~~eA~~~l~~-~~~~~iflttGsk~L~-~f~~~~~~~~r~~~RvLp~~~~~~g 168 (249)
T PF02571_consen 111 ------------NWHYVD--------SYEEAAELLKE-LGGGRIFLTTGSKNLP-PFVPAPLPGERLFARVLPTPESALG 168 (249)
T ss_pred ------------eEEEeC--------CHHHHHHHHhh-cCCCCEEEeCchhhHH-HHhhcccCCCEEEEEECCCccccCC
Confidence 111111 11233333311 1224688999876553 2322 111112222232 111111
Q ss_pred C-CCCeEE--cCCCCCHH-HHHh--hcCEEEecCChh-----HHHHHHHcCCcEEEEeCCCCC
Q 001947 260 L-PPNFIK--LPKDAYTP-DFMA--ASDCMLGKIGYG-----TVSEALAYKLPFVFVRRDYFN 311 (992)
Q Consensus 260 l-~~nv~v--~~f~~~~p-~lL~--aaDlvIt~~G~~-----Tv~Eal~~GvP~V~iP~~~~~ 311 (992)
+ +.|+.. -||...+. .+++ .+|++||+--++ -+.-|..+|+|+|+|.+|...
T Consensus 169 ~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK~SG~~g~~eKi~AA~~lgi~vivI~RP~~~ 231 (249)
T PF02571_consen 169 FPPKNIIAMQGPFSKELNRALFRQYGIDVLVTKESGGSGFDEKIEAARELGIPVIVIKRPPEP 231 (249)
T ss_pred CChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEcCCCchhhHHHHHHHHHcCCeEEEEeCCCCC
Confidence 3 345443 25554444 4555 499999973222 245688999999999987543
No 208
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=90.93 E-value=0.69 Score=45.21 Aligned_cols=97 Identities=26% Similarity=0.251 Sum_probs=43.9
Q ss_pred ccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhccHHHhH
Q 001947 28 GHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVAPRKSIL 107 (992)
Q Consensus 28 GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 107 (992)
|--.....++++|.++||+|++++..+...... .....+.+.... +.... .....+ ..+
T Consensus 2 G~~~~~~~l~~~L~~~G~~V~v~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~----~~~~~~------------~~~ 60 (160)
T PF13579_consen 2 GIERYVRELARALAARGHEVTVVTPQPDPEDDE-EEEDGVRVHRLP----LPRRP----WPLRLL------------RFL 60 (160)
T ss_dssp HHHHHHHHHHHHHHHTT-EEEEEEE---GGG-S-EEETTEEEEEE------S-SS----SGGGHC------------CHH
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEecCCCCcccc-cccCCceEEecc----CCccc----hhhhhH------------HHH
Confidence 445667899999999999999998654222111 111122232211 00000 000000 011
Q ss_pred HHHHHHH--HcCCCcEEEECCCc---hHHHHHHHcCCcEEEEe
Q 001947 108 KDEVEWL--NSIKADLVVSDVVP---VACRAAADAGIRSVCVT 145 (992)
Q Consensus 108 ~~~~~~L--~~~kPDlVVsD~~~---~a~~aA~~~gIP~v~is 145 (992)
....+++ ++.+||+|++.... ++.++.+..++|+|...
T Consensus 61 ~~~~~~l~~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~ 103 (160)
T PF13579_consen 61 RRLRRLLAARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTV 103 (160)
T ss_dssp HHHHHHCHHCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-
T ss_pred HHHHHHHhhhccCCeEEEecccchhHHHHHHHHccCCcEEEEE
Confidence 2334455 78899999987632 23333337799998763
No 209
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=90.52 E-value=16 Score=41.54 Aligned_cols=85 Identities=12% Similarity=0.171 Sum_probs=52.1
Q ss_pred CCcEEEEEcCCCCC-h-h------hHHHhhCCCCcEEEEeCCCC-CC----------CCC-CeE-EcCCCC--CHHHHHh
Q 001947 222 DVKLLILNFGGQPA-G-W------KLKEEYLPSGWKCLVCGASD-SQ----------LPP-NFI-KLPKDA--YTPDFMA 278 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~-~-~------~ll~~l~~~~~~~Vv~G~~~-~~----------l~~-nv~-v~~f~~--~~p~lL~ 278 (992)
++++|++..|+... . | ++.+.+...++.+++.|... .+ .+. ++. +.+..+ .+..+|+
T Consensus 180 ~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~~~~~~i~~~~~~~~~~~l~g~~sL~el~ali~ 259 (344)
T TIGR02201 180 GQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDELAMVNEIAQGCQTPRVTSLAGKLTLPQLAALID 259 (344)
T ss_pred CCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHhhCCCCcccccCCCCCHHHHHHHHH
Confidence 45777777776433 1 2 34444544467777776422 11 121 222 233221 2347889
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 001947 279 ASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 279 aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~ 307 (992)
.||++||. -.|.+.=|.++|+|+|.+=-
T Consensus 260 ~a~l~Vs~-DSGp~HlAaA~g~p~v~Lfg 287 (344)
T TIGR02201 260 HARLFIGV-DSVPMHMAAALGTPLVALFG 287 (344)
T ss_pred hCCEEEec-CCHHHHHHHHcCCCEEEEEC
Confidence 99999995 44799999999999999853
No 210
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=89.51 E-value=20 Score=39.44 Aligned_cols=36 Identities=19% Similarity=0.162 Sum_probs=29.1
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC
Q 001947 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY 309 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~ 309 (992)
+..+++.||++|+.-. +++.=|.++|+|+|++-.+.
T Consensus 192 ~~~li~~~~l~I~~Ds-g~~HlA~a~~~p~i~l~g~~ 227 (279)
T cd03789 192 LAALLARADLVVTNDS-GPMHLAAALGTPTVALFGPT 227 (279)
T ss_pred HHHHHHhCCEEEeeCC-HHHHHHHHcCCCEEEEECCC
Confidence 4578899999999643 68888899999999986443
No 211
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=89.30 E-value=3.3 Score=41.08 Aligned_cols=27 Identities=33% Similarity=0.484 Sum_probs=22.1
Q ss_pred cccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 27 FGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 27 ~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
.|--.-+..|+++|.++||+|++++..
T Consensus 12 GG~e~~~~~l~~~l~~~G~~v~v~~~~ 38 (177)
T PF13439_consen 12 GGAERVVLNLARALAKRGHEVTVVSPG 38 (177)
T ss_dssp SHHHHHHHHHHHHHHHTT-EEEEEESS
T ss_pred ChHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 466667779999999999999999765
No 212
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=88.82 E-value=0.17 Score=59.72 Aligned_cols=55 Identities=9% Similarity=-0.126 Sum_probs=46.0
Q ss_pred hhhhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 393 FGYELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 393 ~~~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
|.+-++. ..+|.++.|..++|++..+..+.+.|.|. +++|+ ||||+|||..||+.
T Consensus 366 ~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGlEd~~dL~~Dl~~ 423 (431)
T PRK08248 366 FSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTP----GLVRLSVGTEAIDDILDDLRQ 423 (431)
T ss_pred ceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 3334444 67789999999999999887777789998 99999 89999999999876
No 213
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=87.83 E-value=0.08 Score=60.32 Aligned_cols=47 Identities=21% Similarity=-0.018 Sum_probs=42.4
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.-+|..+.|+.|+|++ ++..|..+|.+. +|+|+ ||||.|||..|++.
T Consensus 354 ~~eSL~~~p~~mth~~-~~e~~~~~Gi~~----~LVRvSVGiEd~~dL~~d~~~ 402 (409)
T KOG0053|consen 354 GNESLAEPPAIMTHAS-ELEEREKFGIDP----NLVRVSVGIEDIEDLIKDFQQ 402 (409)
T ss_pred ccchhhcchhhhccCC-CHHHHHhcCCCC----CcEEEEeccCCHHHHHHHHHH
Confidence 4566899999999999 988888899999 99998 89999999999865
No 214
>PF01975 SurE: Survival protein SurE; InterPro: IPR002828 This entry represents a SurE-like structural domain with a 3-layer alpha/bete/alpha topology that bears some topological similarity to the N-terminal domain of the glutaminase/asparaginase family. This domain is found in the stationary phase survival protein SurE, a metal ion-dependent phosphatase found in eubacteria, archaea and eukaryotes. In Escherichia coli, SurE also has activity as a nucleotidase and exopolyphosphatase, and may be involved in the stress response []. E. coli cells with mutations in the surE gene survive poorly in stationary phase []. The structure of SurE homologues have been determined from Thermotoga maritima [] and the archaea Pyrobaculum aerophilum []. The T. maritima SurE homologue has phosphatase activity that is inhibited by vanadate or tungstate, both of which bind adjacent to the divalent metal ion. This domain is found in acid phosphatases (3.1.3.2 from EC), 5'-nucleotidases (3.1.3.5 from EC), 3'-nucleotidases (3.1.3.6 from EC) and exopolyphosphatases (3.6.1.11 from EC).; GO: 0016787 hydrolase activity; PDB: 1L5X_B 2V4O_D 2V4N_A 2WQK_B 2E6G_G 2E69_D 2E6C_C 2E6B_D 2E6E_A 2E6H_A ....
Probab=87.75 E-value=2.5 Score=44.09 Aligned_cols=31 Identities=29% Similarity=0.455 Sum_probs=21.4
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
...-|. +..=..+|+++|++.||+|+++.+.
T Consensus 6 TNDDGi-~a~Gi~aL~~~L~~~g~~V~VvAP~ 36 (196)
T PF01975_consen 6 TNDDGI-DAPGIRALAKALSALGHDVVVVAPD 36 (196)
T ss_dssp E-SS-T-TSHHHHHHHHHHTTTSSEEEEEEES
T ss_pred EcCCCC-CCHHHHHHHHHHHhcCCeEEEEeCC
Confidence 455554 3344568999998888999999765
No 215
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=87.72 E-value=0.51 Score=56.18 Aligned_cols=68 Identities=18% Similarity=0.165 Sum_probs=50.5
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~---G~~-Tv~Eal~~GvP----~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.++.+|+.||++|..+ |+| ++.||++||+| +|+....+..++ ...|+.++..+ ++.+.++|
T Consensus 353 el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---------~~~g~lv~p~d--~~~la~ai 421 (460)
T cd03788 353 ELAALYRAADVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---------LSGALLVNPYD--IDEVADAI 421 (460)
T ss_pred HHHHHHHhccEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---------cCCCEEECCCC--HHHHHHHH
Confidence 5678999999999643 544 78999999999 666544444433 24577787766 47899999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.++++++
T Consensus 422 ~~~l~~~ 428 (460)
T cd03788 422 HRALTMP 428 (460)
T ss_pred HHHHcCC
Confidence 9999765
No 216
>PLN02509 cystathionine beta-lyase
Probab=87.39 E-value=0.089 Score=62.36 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=46.5
Q ss_pred hhhhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 393 FGYELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 393 ~~~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
|.+-++. .++|.++.|+.++|++..+..+.+.|.++ +++|| ||||+|||..||+.
T Consensus 400 ~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~----~liRlSvGlE~~~DLi~Dl~~ 457 (464)
T PLN02509 400 FSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTE----DLVRISAGIEDVDDLISDLDI 457 (464)
T ss_pred ceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 4444444 67789999999999998887777889998 99999 89999999999975
No 217
>PRK07049 methionine gamma-lyase; Validated
Probab=85.93 E-value=0.18 Score=59.35 Aligned_cols=55 Identities=11% Similarity=-0.092 Sum_probs=44.8
Q ss_pred hhhhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 393 FGYELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 393 ~~~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
|..-++. .++|.++.|+.++|++.....+...|.+. +++|+ ||||+|||..||+.
T Consensus 365 ~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 422 (427)
T PRK07049 365 FKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLE----STIRLSIGIEHPDDLIADLAQ 422 (427)
T ss_pred cEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCc----CeEEEEeCcCCHHHHHHHHHH
Confidence 3333444 67889999999999988776666678888 99999 89999999999875
No 218
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=85.50 E-value=4.6 Score=47.90 Aligned_cols=112 Identities=17% Similarity=0.097 Sum_probs=66.7
Q ss_pred HHHhCCCCCCcEEEEEcCCCCCh-hhHHHh---hC--CCCcEEEEeCC-CCCC-------------C-CCCeEEcCCCCC
Q 001947 214 RKELGIEDDVKLLILNFGGQPAG-WKLKEE---YL--PSGWKCLVCGA-SDSQ-------------L-PPNFIKLPKDAY 272 (992)
Q Consensus 214 r~~l~~~~d~~~Vlvs~Gg~~~~-~~ll~~---l~--~~~~~~Vv~G~-~~~~-------------l-~~nv~v~~f~~~ 272 (992)
|..+|++++ -+||+++++.... .+++.. ++ -++=++++.+. ..++ + +..+++.|..++
T Consensus 421 R~~lglp~~-avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~~~~~~l~~la~~~Gv~~eRL~f~p~~~~ 499 (620)
T COG3914 421 RAQLGLPED-AVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDAEINARLRDLAEREGVDSERLRFLPPAPN 499 (620)
T ss_pred hhhcCCCCC-eEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcHHHHHHHHHHHHHcCCChhheeecCCCCC
Confidence 456788755 4789998765542 233331 11 13334444433 2221 1 456677766543
Q ss_pred H--HHHHhhcCEEEec---CChhHHHHHHHcCCcEEEEeCCCCCChHH--H-HHHHHHcCcEEEEe
Q 001947 273 T--PDFMAASDCMLGK---IGYGTVSEALAYKLPFVFVRRDYFNEEPF--L-RNMLEFYQGGVEMI 330 (992)
Q Consensus 273 ~--p~lL~aaDlvIt~---~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~--N-A~~le~~G~Gi~v~ 330 (992)
- -.-+.-||+|.-. +|.+|..|+|.+|+|||... .||+. | +..+...|.-..+-
T Consensus 500 ~~h~a~~~iADlvLDTyPY~g~TTa~daLwm~vPVlT~~----G~~FasR~~~si~~~agi~e~vA 561 (620)
T COG3914 500 EDHRARYGIADLVLDTYPYGGHTTASDALWMGVPVLTRV----GEQFASRNGASIATNAGIPELVA 561 (620)
T ss_pred HHHHHhhchhheeeecccCCCccchHHHHHhcCceeeec----cHHHHHhhhHHHHHhcCCchhhc
Confidence 1 1445679999953 68899999999999999986 35532 2 24445556554443
No 219
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=85.05 E-value=2.1 Score=51.59 Aligned_cols=71 Identities=13% Similarity=0.120 Sum_probs=45.3
Q ss_pred HHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHc-CcEEEEecCCC-----ChhhHHHHHH
Q 001947 275 DFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFY-QGGVEMIRRDL-----LTGHWKPYLE 344 (992)
Q Consensus 275 ~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~-G~Gi~v~~~~~-----~~~~l~~al~ 344 (992)
++|+.||++|..+ |+ .|+.||++||+|+|+....++.+- .-+.+... ..|+.+..++. ..+.+.++|.
T Consensus 470 E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~--v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~ 547 (590)
T cd03793 470 EFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCF--MEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMY 547 (590)
T ss_pred HHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhh--hHHHhccCCCceEEEecCCccchHHHHHHHHHHHH
Confidence 7899999999854 43 599999999999999987665321 11122222 25777764331 1245555555
Q ss_pred HHh
Q 001947 345 RAI 347 (992)
Q Consensus 345 ~ll 347 (992)
+++
T Consensus 548 ~~~ 550 (590)
T cd03793 548 EFC 550 (590)
T ss_pred HHh
Confidence 555
No 220
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=84.97 E-value=0.39 Score=56.55 Aligned_cols=48 Identities=8% Similarity=-0.155 Sum_probs=42.2
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|.+..+..+.+.|.|. +++|+ ||||+|||..||+.
T Consensus 369 ~~~slv~~p~~~~h~~~~~~~~~~~gi~~----~liR~svGlEd~~dLi~dl~~ 418 (425)
T PRK06084 369 DAKSLACHPASTTHRQLNDEELEKAGVSR----DMVRLSIGIEHIDDIIADLAQ 418 (425)
T ss_pred CCceeeeCCCcCCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67788999999999988766666788888 99999 89999999999875
No 221
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=84.86 E-value=0.38 Score=56.68 Aligned_cols=48 Identities=8% Similarity=-0.147 Sum_probs=42.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.++.|..++|.+.....+.+.|.|. +++|+ |+||+|||..||+.
T Consensus 378 ~~~sLi~~p~~~~h~~~~~~~~~~~gi~~----~liRlSvGlEd~~dli~dl~~ 427 (436)
T PRK07812 378 DVRSLVIHPASTTHSQLTPEEQLATGVTP----GLVRLAVGIEGIDDILADLEA 427 (436)
T ss_pred CCcceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 56778999999999998776676789888 99999 89999999999876
No 222
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=84.55 E-value=5.3 Score=47.58 Aligned_cols=136 Identities=19% Similarity=0.238 Sum_probs=86.4
Q ss_pred hHHHHHHhCCCCCCc-EEEEEcCCCCCh--h----hHHHhhCCCCcEEEEeCCCCCC-----------CCCCeE-EcCCC
Q 001947 210 RKEVRKELGIEDDVK-LLILNFGGQPAG--W----KLKEEYLPSGWKCLVCGASDSQ-----------LPPNFI-KLPKD 270 (992)
Q Consensus 210 r~e~r~~l~~~~d~~-~Vlvs~Gg~~~~--~----~ll~~l~~~~~~~Vv~G~~~~~-----------l~~nv~-v~~f~ 270 (992)
+..+++.++++.+.+ .++...|....- . +.+..+...++++|+.|...+. .+.++. ..+|.
T Consensus 279 k~~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vilG~gd~~le~~~~~la~~~~~~~~~~i~~~ 358 (487)
T COG0297 279 KVALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVLLGTGDPELEEALRALASRHPGRVLVVIGYD 358 (487)
T ss_pred HHHHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhCceEEEEecCcHHHHHHHHHHHHhcCceEEEEeeec
Confidence 446778889885433 455555655542 1 2233344556899998887542 244444 35555
Q ss_pred CCHH-HHHhhcCEEEec-----CChhHHHHHHHcCCcEEEEeCCCCCChHHHH--HHHHHcCcEEEEecCCCChhhHHHH
Q 001947 271 AYTP-DFMAASDCMLGK-----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLR--NMLEFYQGGVEMIRRDLLTGHWKPY 342 (992)
Q Consensus 271 ~~~p-~lL~aaDlvIt~-----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA--~~le~~G~Gi~v~~~~~~~~~l~~a 342 (992)
..+. .+++.+|+++-. || -|-+++|..|++-|+.+..+-.|--... ......|.|...... +++.+..+
T Consensus 359 ~~la~~i~agaD~~lmPSrfEPcG-L~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~~~--~~~~l~~a 435 (487)
T COG0297 359 EPLAHLIYAGADVILMPSRFEPCG-LTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQT--NPDHLANA 435 (487)
T ss_pred HHHHHHHHhcCCEEEeCCcCcCCc-HHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEecC--CHHHHHHH
Confidence 4333 677899999963 56 6999999999988888866554431111 112445777777654 67889999
Q ss_pred HHHHhh
Q 001947 343 LERAIS 348 (992)
Q Consensus 343 l~~ll~ 348 (992)
|.+.+.
T Consensus 436 l~rA~~ 441 (487)
T COG0297 436 LRRALV 441 (487)
T ss_pred HHHHHH
Confidence 988764
No 223
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=84.49 E-value=1.9 Score=46.98 Aligned_cols=92 Identities=15% Similarity=0.204 Sum_probs=58.8
Q ss_pred HHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCCh--HHHHHHH-HHcCcEEEEecCCCChhhHHHHHHHHhhC
Q 001947 273 TPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEE--PFLRNML-EFYQGGVEMIRRDLLTGHWKPYLERAISL 349 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ--~~NA~~l-e~~G~Gi~v~~~~~~~~~l~~al~~ll~~ 349 (992)
..+.|.++|++|+.+| +.+-.+.-.|||+|.+|-. .-| +.-|++= .-+|+.+.+-.... ..-..+..+++.+
T Consensus 305 fadiLH~adaalgmAG-TAtEQavGLGkPvi~fPg~--GPQy~pgFA~rQ~rLLG~sltlv~~~a--q~a~~~~q~ll~d 379 (412)
T COG4370 305 FADILHAADAALGMAG-TATEQAVGLGKPVIGFPGQ--GPQYNPGFAERQQRLLGASLTLVRPEA--QAAAQAVQELLGD 379 (412)
T ss_pred HHHHHHHHHHHHHhcc-chHHHhhccCCceeecCCC--CCCcChHHHHHHHHHhcceeeecCCch--hhHHHHHHHHhcC
Confidence 4589999999999999 6777889999999999943 333 2333333 34588877765442 2223334448887
Q ss_pred CCCcc----------CCCCHHHHHHHHHHH
Q 001947 350 KPCYE----------GGINGGEVAAHILQE 369 (992)
Q Consensus 350 ~~~~~----------~~~~G~~~aA~~I~~ 369 (992)
+.+.. .....+.++|+.+.+
T Consensus 380 p~r~~air~nGqrRiGqaGaa~rIAe~l~e 409 (412)
T COG4370 380 PQRLTAIRHNGQRRIGQAGAARRIAEELGE 409 (412)
T ss_pred hHHHHHHHhcchhhccCcchHHHHHHHHHH
Confidence 76532 344455566655544
No 224
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=84.13 E-value=0.17 Score=59.45 Aligned_cols=48 Identities=8% Similarity=-0.155 Sum_probs=42.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|..++|++.....+...|.|. .++|+ ||||+|||..||+.
T Consensus 366 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 415 (418)
T TIGR01326 366 DAKSLVIHPASTTHQQLSEEEQLKAGVTP----GLIRLSVGIENIDDIIADLEQ 415 (418)
T ss_pred CCCceeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEecCCCHHHHHHHHHH
Confidence 67889999999999988777777789988 99999 89999999999864
No 225
>PRK06234 methionine gamma-lyase; Provisional
Probab=83.19 E-value=0.63 Score=54.34 Aligned_cols=55 Identities=7% Similarity=-0.118 Sum_probs=44.7
Q ss_pred hhhhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 393 FGYELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 393 ~~~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
|....+. ..+|.+..|.+++|++..+..+...|.|+ +++|+ |+||+|||..||+.
T Consensus 336 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~l~R~svGlE~~~dl~~dl~~ 393 (400)
T PRK06234 336 ATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISD----GLVRLSVGLEDVDDIIADLKQ 393 (400)
T ss_pred ceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCC----CeEEEEeCCCCHHHHHHHHHH
Confidence 3333444 56778899999999988777667788888 99999 89999999999876
No 226
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=83.16 E-value=0.57 Score=55.07 Aligned_cols=48 Identities=13% Similarity=-0.102 Sum_probs=41.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+.-|..++|++.....+.+.|.+. +++|| ||||+|||..||+.
T Consensus 371 g~~Slv~~p~~~th~~~~~~~~~~~Gi~~----~liRlSvGlEd~eDLi~Dl~~ 420 (432)
T PRK06702 371 DARTCVIHPASTTHRQLSAEDQRLAGVTS----DLIRLSVGIEDVSDIIADLEA 420 (432)
T ss_pred CCCcceECCCCCCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67888999999999988776666678887 99999 89999999999875
No 227
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=82.88 E-value=0.19 Score=58.59 Aligned_cols=48 Identities=13% Similarity=-0.142 Sum_probs=42.8
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|..++|++.....+.+.|.|+ +++|+ ||||+|||..||+.
T Consensus 342 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 391 (398)
T PRK07504 342 DAKSLITHPATTTHKNLSPEARAELGISE----GFLRLSAGLEDTDDLIEDLAA 391 (398)
T ss_pred CCCeeeeCCCCCCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67889999999999998777777788888 99999 89999999999875
No 228
>PRK06434 cystathionine gamma-lyase; Validated
Probab=82.72 E-value=0.17 Score=58.52 Aligned_cols=48 Identities=10% Similarity=-0.106 Sum_probs=42.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|..++|.+..+..+...|.+. +++|+ ||||+|||..||++
T Consensus 331 ~~~sl~~~p~~~~h~~~~~e~~~~~gi~~----~liRlsvGlEd~~dLi~dl~~ 380 (384)
T PRK06434 331 GVESLITLPVETSHSSLSPEERERLGISD----NLVRFSIGIEDIDDLIKDIEN 380 (384)
T ss_pred CCCeeeECCCccccccCCHHHHHhcCCCc----CeEEEEeCcCCHHHHHHHHHH
Confidence 56778999999999998777777788888 99999 89999999999865
No 229
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=81.89 E-value=0.23 Score=57.99 Aligned_cols=48 Identities=19% Similarity=-0.030 Sum_probs=42.5
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|.+.....|...|+|. +++|+ ||||+|||..||+.
T Consensus 340 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 389 (398)
T PRK08249 340 AVETIYGPARTTSHVENTLEERAALGIPE----GLVRISVGIEDTEDLIADLEQ 389 (398)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67788999999999998777777778888 99999 89999999999876
No 230
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=81.20 E-value=2.9 Score=53.17 Aligned_cols=68 Identities=16% Similarity=0.141 Sum_probs=51.2
Q ss_pred HHHHHhhcCEEEecC---Chh-HHHHHHHcCCc----EEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 273 TPDFMAASDCMLGKI---GYG-TVSEALAYKLP----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~---G~~-Tv~Eal~~GvP----~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
++.+|++||++|..+ |+| ++.|+++||+| +|+-...+..++ + ...|+.+++.+ .+.+.++|.
T Consensus 369 l~aly~~ADvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~------l--~~~allVnP~D--~~~lA~AI~ 438 (797)
T PLN03063 369 LCALYAITDVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQS------L--GAGALLVNPWN--ITEVSSAIK 438 (797)
T ss_pred HHHHHHhCCEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhh------h--cCCeEEECCCC--HHHHHHHHH
Confidence 457899999999765 776 78899999999 555544444443 2 12688888876 478999999
Q ss_pred HHhhCC
Q 001947 345 RAISLK 350 (992)
Q Consensus 345 ~ll~~~ 350 (992)
++|+.+
T Consensus 439 ~aL~m~ 444 (797)
T PLN03063 439 EALNMS 444 (797)
T ss_pred HHHhCC
Confidence 999855
No 231
>PRK07671 cystathionine beta-lyase; Provisional
Probab=81.17 E-value=0.24 Score=57.31 Aligned_cols=48 Identities=19% Similarity=-0.083 Sum_probs=42.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|...+|.+.....+.+.|.++ .++|+ |+||+|||..||+.
T Consensus 325 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 374 (377)
T PRK07671 325 AVESLISIPSQMTHASIPADRRKELGITD----GLIRISVGIEDGEDLIEDLAQ 374 (377)
T ss_pred CCCeEeECCCccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67789999999999998877777789988 99999 89999999999864
No 232
>PRK06767 methionine gamma-lyase; Provisional
Probab=81.10 E-value=0.28 Score=57.04 Aligned_cols=55 Identities=11% Similarity=-0.075 Sum_probs=44.8
Q ss_pred hhhhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 393 FGYELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 393 ~~~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
|++-.+. ..+|.+..|..++|+...+..+.+.|.++ +++|+ ||||+|||..||+.
T Consensus 324 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~l~R~svGlE~~~dl~~dl~~ 381 (386)
T PRK06767 324 ITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYD----NLIRLSVGLESWEDIVSDLEQ 381 (386)
T ss_pred cEEecCCCCcCccccCCCccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 3334444 67788999999999988776777788888 99999 89999999999875
No 233
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=80.50 E-value=0.27 Score=57.10 Aligned_cols=48 Identities=17% Similarity=-0.145 Sum_probs=42.2
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|.+.....+.+.|.+. +++|+ |+||+|||..||+.
T Consensus 329 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 378 (386)
T PRK08045 329 GVESLISHAATMTHAGMAPEARAAAGISE----TLLRISTGIEDGEDLIADLEN 378 (386)
T ss_pred CCceeEeCCCCcccccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHH
Confidence 67788999999999998777666788888 99999 89999999999875
No 234
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=79.92 E-value=3.5 Score=45.21 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=37.3
Q ss_pred CCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCC
Q 001947 262 PNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDY 309 (992)
Q Consensus 262 ~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~ 309 (992)
.++.++....++.++|..||.|||-.+ ++-.||+.+|+|++++-.+.
T Consensus 182 ~~~~~~~~~~~~~~Ll~~s~~VvtinS-tvGlEAll~gkpVi~~G~~~ 228 (269)
T PF05159_consen 182 PNVVIIDDDVNLYELLEQSDAVVTINS-TVGLEALLHGKPVIVFGRAF 228 (269)
T ss_pred CCeEEECCCCCHHHHHHhCCEEEEECC-HHHHHHHHcCCceEEecCcc
Confidence 344444433467799999999999777 78899999999999997654
No 235
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=79.86 E-value=0.32 Score=55.96 Aligned_cols=48 Identities=21% Similarity=-0.042 Sum_probs=44.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..++.++.|.=++|+.+++..|...|.+. .++|| ||||.|||+.||+.
T Consensus 341 gveSLi~~pa~~th~~~~~~~r~~~Gi~~----~LvRlSVGlEd~eDLi~Dl~~ 390 (396)
T COG0626 341 GVESLISHPATMTHASIPLEERAKAGITD----GLVRLSVGLEDVEDLIADLEQ 390 (396)
T ss_pred CcccccccccccCcccCCHhHHHhcCCCC----CeEEEEecCCCHHHHHHHHHH
Confidence 56779999999999999999998899999 99999 89999999999875
No 236
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=79.85 E-value=0.26 Score=58.12 Aligned_cols=48 Identities=15% Similarity=-0.007 Sum_probs=42.4
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|+......+.+.|.|. +++|+ |+||+|||..||+.
T Consensus 383 ~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGlE~~~dLi~Dl~~ 432 (437)
T PRK05613 383 DVRSLVVHPATTTHSQSDEAGLARAGITQ----ATVRLSVGIEDIDDIIADLEG 432 (437)
T ss_pred CCchhhcCCCccCCccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 56778889999999988887777789988 99999 89999999999875
No 237
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=79.64 E-value=0.54 Score=54.48 Aligned_cols=53 Identities=13% Similarity=-0.164 Sum_probs=40.3
Q ss_pred hhhcc-cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 395 YELQR-VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 395 ~~~q~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.-.+. ..+|.++.|..++|.+.++..+.+.|.+. +++|+ |+||+|||..||+.
T Consensus 328 ~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~----~liRlSvGlEd~~dLi~Dl~~ 383 (386)
T PF01053_consen 328 IAPSLGGVESLISHPASTSHRSLSPEERAEAGISD----GLIRLSVGLEDPDDLIADLEQ 383 (386)
T ss_dssp ESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-T----TEEEEE--SS-HHHHHHHHHH
T ss_pred hhhhcCCcccccccccchhhccCChhhhhccCCCC----CeeEEEeccCCHHHHHHHHHH
Confidence 33444 67788999999999998877777788888 99999 89999999999853
No 238
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=79.45 E-value=0.31 Score=56.70 Aligned_cols=48 Identities=10% Similarity=-0.078 Sum_probs=41.5
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|++.....+.+.|.+. +++|+ |+||+|||+.||+.
T Consensus 337 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 386 (390)
T PRK08133 337 DTKTTITHPATTTHGRLSPEARAAAGITE----GLIRVAVGLEDVADIKADLAR 386 (390)
T ss_pred CcceeeecCCCCCcccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHH
Confidence 46778999999999988776666778888 99999 89999999999875
No 239
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=79.22 E-value=0.32 Score=57.26 Aligned_cols=48 Identities=13% Similarity=-0.088 Sum_probs=41.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|.+.....+...|.|+ +++|+ ||||+|||..||+.
T Consensus 373 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGlE~~~dli~dl~~ 422 (427)
T PRK05994 373 DTRSLVIHPASTTHRQLTDEQKVAAGAGP----DVVRLSIGIEDVDDIIADLEQ 422 (427)
T ss_pred CCcceeeCCCCCCcccCCHHHHHhcCCCC----CcEEEEeccCCHHHHHHHHHH
Confidence 57778999999999988766666788888 99999 89999999999875
No 240
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=79.11 E-value=15 Score=41.33 Aligned_cols=82 Identities=15% Similarity=0.080 Sum_probs=59.9
Q ss_pred CCeEEc-CCC---CCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCC
Q 001947 262 PNFIKL-PKD---AYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD 333 (992)
Q Consensus 262 ~nv~v~-~f~---~~~p~lL~aaDlvIt~----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~ 333 (992)
.|+.++ .|. +|+ .+|+.||+.|-. -|.||++=.+.+|+|+++-.... --+.+.+.|+-+....++
T Consensus 245 ~~~~iL~e~mpf~eYl-~lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~~~np------~~~~l~~~~ipVlf~~d~ 317 (360)
T PF07429_consen 245 ENFQILTEFMPFDEYL-ALLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLSRDNP------FWQDLKEQGIPVLFYGDE 317 (360)
T ss_pred cceeEhhhhCCHHHHH-HHHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEecCCh------HHHHHHhCCCeEEecccc
Confidence 477654 222 221 678999999963 48899999999999999965322 345688889988888888
Q ss_pred CChhhHHHHHHHHhhCC
Q 001947 334 LLTGHWKPYLERAISLK 350 (992)
Q Consensus 334 ~~~~~l~~al~~ll~~~ 350 (992)
++...+.++=+++...+
T Consensus 318 L~~~~v~ea~rql~~~d 334 (360)
T PF07429_consen 318 LDEALVREAQRQLANVD 334 (360)
T ss_pred CCHHHHHHHHHHHhhCc
Confidence 88777777766666544
No 241
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=78.91 E-value=39 Score=37.68 Aligned_cols=79 Identities=23% Similarity=0.161 Sum_probs=55.5
Q ss_pred CCeEEc----CCCCCHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCC
Q 001947 262 PNFIKL----PKDAYTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRD 333 (992)
Q Consensus 262 ~nv~v~----~f~~~~p~lL~aaDlvIt~----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~ 333 (992)
+++.++ +|.+| -.+|+.||+.|-. =|.||++=.+.+|+|+++-....+. +.+.+.|+-+..+.+.
T Consensus 206 ~~~~~L~e~l~f~eY-l~lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~r~n~fw------qdl~e~gv~Vlf~~d~ 278 (322)
T PRK02797 206 ENFQILTEKLPFDDY-LALLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLSRDNPFW------QDLTEQGLPVLFTGDD 278 (322)
T ss_pred ccEEehhhhCCHHHH-HHHHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEecCCchH------HHHHhCCCeEEecCCc
Confidence 688765 22222 2788999999963 3889999999999999997633322 3477889998888888
Q ss_pred CChhhHHHHHHHHh
Q 001947 334 LLTGHWKPYLERAI 347 (992)
Q Consensus 334 ~~~~~l~~al~~ll 347 (992)
++...+.++=+++.
T Consensus 279 L~~~~v~e~~rql~ 292 (322)
T PRK02797 279 LDEDIVREAQRQLA 292 (322)
T ss_pred ccHHHHHHHHHHHH
Confidence 87555655534443
No 242
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=78.73 E-value=0.33 Score=56.20 Aligned_cols=48 Identities=21% Similarity=0.116 Sum_probs=41.3
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|..++|....+..+...|.++ .++|+ |+||+|||..||+.
T Consensus 322 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 371 (378)
T TIGR01329 322 SVNSLISMPCFMSHASIPAEVREERGLPE----DLVRLSVGIEDVDDLISDLDI 371 (378)
T ss_pred CCCceeeCCCccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 56678899999999987766666788888 99999 89999999999875
No 243
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=78.70 E-value=1.3 Score=52.06 Aligned_cols=85 Identities=16% Similarity=0.007 Sum_probs=59.8
Q ss_pred HHHhhcCEEEecC-C---hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 275 DFMAASDCMLGKI-G---YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 275 ~lL~aaDlvIt~~-G---~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.+++.+.++...+ + +-|+.|||+||+|+|++...+..|- ++..--|..+++.+-....|..++.++.+++
T Consensus 361 rl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~Ei------V~~~~tG~l~dp~~e~~~~~a~~~~kl~~~p 434 (495)
T KOG0853|consen 361 RLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEI------VVHGVTGLLIDPGQEAVAELADALLKLRRDP 434 (495)
T ss_pred HHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEE------EEcCCcceeeCCchHHHHHHHHHHHHHhcCH
Confidence 4556677776544 2 1489999999999999987665554 5666778888874433347999999998887
Q ss_pred CCcc-CCCCHHHHHHH
Q 001947 351 PCYE-GGINGGEVAAH 365 (992)
Q Consensus 351 ~~~~-~~~~G~~~aA~ 365 (992)
..+. ...+|.+++-+
T Consensus 435 ~l~~~~~~~G~~rV~e 450 (495)
T KOG0853|consen 435 ELWARMGKNGLKRVKE 450 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6543 56666665544
No 244
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=78.08 E-value=0.32 Score=57.34 Aligned_cols=48 Identities=15% Similarity=-0.105 Sum_probs=41.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|.+.....+...|.+. +++|+ ||||+|||..||+.
T Consensus 374 ~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~----~liRlsvGlE~~~dli~dl~~ 423 (433)
T PRK08134 374 DARSLVIHPASTTHFRMDAAALAAAGIGE----GTIRLSIGLEDADDLIDDLKR 423 (433)
T ss_pred CCCceeeCCCccCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 56678999999999998776666788888 99999 89999999999876
No 245
>PRK05939 hypothetical protein; Provisional
Probab=77.89 E-value=0.35 Score=56.40 Aligned_cols=48 Identities=17% Similarity=-0.238 Sum_probs=41.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|.+..+..+.+.|.|. +++|+ |+||+|||..||+.
T Consensus 343 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~lvR~svGlEd~~dLi~dl~~ 392 (397)
T PRK05939 343 DTRTLVIPVAPTIYYEMGAERRASMGIAD----SLIRVSVGIEDEADLIADFEQ 392 (397)
T ss_pred CCCeeeecCcccccccCCHHHHHhcCCCC----CeEEEEeCCCCHHHHHHHHHH
Confidence 56778888999999988776677788888 99999 89999999999865
No 246
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=77.57 E-value=5.9 Score=43.25 Aligned_cols=118 Identities=19% Similarity=0.160 Sum_probs=72.3
Q ss_pred EEEEEcCCCCC--hh-hHHHh---hCCC--CcEEEEeCCCCC-------C-----CCCCeEEcCCCC--CHHHHHhhcCE
Q 001947 225 LLILNFGGQPA--GW-KLKEE---YLPS--GWKCLVCGASDS-------Q-----LPPNFIKLPKDA--YTPDFMAASDC 282 (992)
Q Consensus 225 ~Vlvs~Gg~~~--~~-~ll~~---l~~~--~~~~Vv~G~~~~-------~-----l~~nv~v~~f~~--~~p~lL~aaDl 282 (992)
.++++.|.... +. .+++. +... .+.+++.|.... . ...++...++.+ .+..++..||+
T Consensus 200 ~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~ 279 (381)
T COG0438 200 FVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREELEKLAKKLGLEDNVKFLGYVPDEELAELLASADV 279 (381)
T ss_pred eEEEEeeccChhcCHHHHHHHHHHhhhhcCCeEEEEEcCCCccHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHhCCE
Confidence 56667776444 12 22332 2221 256677776543 1 136777777766 45578888999
Q ss_pred EEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 283 MLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 283 vIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
++... |+ .++.|++++|+|+|..+.++..| .+...+.|..+... ..+.+..++..++++.
T Consensus 280 ~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e------~~~~~~~g~~~~~~--~~~~~~~~i~~~~~~~ 343 (381)
T COG0438 280 FVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPE------VVEDGETGLLVPPG--DVEELADALEQLLEDP 343 (381)
T ss_pred EEeccccccchHHHHHHHhcCCcEEECCCCChHH------HhcCCCceEecCCC--CHHHHHHHHHHHhcCH
Confidence 99762 44 35799999999999987553332 24443346644433 3577888888887654
No 247
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=77.47 E-value=1.1e+02 Score=33.16 Aligned_cols=35 Identities=23% Similarity=0.247 Sum_probs=26.6
Q ss_pred HHHHHcCCCcEEE-ECCCchH------HHHHHHcCCcEEEEe
Q 001947 111 VEWLNSIKADLVV-SDVVPVA------CRAAADAGIRSVCVT 145 (992)
Q Consensus 111 ~~~L~~~kPDlVV-sD~~~~a------~~aA~~~gIP~v~is 145 (992)
.++|++.++++|| ..|+|+. ..+++.+|||++.+.
T Consensus 58 ~~~l~~~~i~~VIDATHPfA~~is~~a~~ac~~~~ipyiR~e 99 (248)
T PRK08057 58 AAYLREEGIDLVIDATHPYAAQISANAAAACRALGIPYLRLE 99 (248)
T ss_pred HHHHHHCCCCEEEECCCccHHHHHHHHHHHHHHhCCcEEEEe
Confidence 5677899999999 5666653 346678899998763
No 248
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=77.36 E-value=0.45 Score=55.39 Aligned_cols=48 Identities=13% Similarity=-0.121 Sum_probs=41.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++.....+...|.+. +++|+ |+||+|||..||+.
T Consensus 337 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 386 (391)
T TIGR01328 337 DAETLIQHPASMTHAVVPKEEREAAGITD----GMIRLSVGLEDADDLIADLKQ 386 (391)
T ss_pred CCcccCcCCCccccccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHH
Confidence 56778999999999987666666778887 99999 89999999999875
No 249
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=77.09 E-value=0.37 Score=55.85 Aligned_cols=48 Identities=15% Similarity=-0.106 Sum_probs=41.8
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|.-++|.+..+..+.+.|.|. +++|+ |+||+|||+.||+.
T Consensus 325 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dli~dl~~ 374 (380)
T PRK06176 325 GVESLVGIPAFMTHACIPKEQREAAGIRD----GLVRLSVGIEHEQDLLEDLEQ 374 (380)
T ss_pred CCCceeeCCcccccccCCHHHHHhcCCCc----CeEEEEeccCCHHHHHHHHHH
Confidence 57778999999999988777777778888 99999 89999999999875
No 250
>PRK06460 hypothetical protein; Provisional
Probab=75.84 E-value=0.41 Score=55.44 Aligned_cols=48 Identities=15% Similarity=-0.121 Sum_probs=41.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..++.++.|..++|.......+.+.|.+. .++|+ |+||+|||..||+.
T Consensus 321 g~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 370 (376)
T PRK06460 321 GVNSVISHPATMSHRTLSLEERKIVGITD----SLLRLSVGIEDVNDLIEDLDR 370 (376)
T ss_pred CCceEEeCccccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 46778888999999988776666778888 99999 89999999999875
No 251
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=75.52 E-value=0.45 Score=55.18 Aligned_cols=48 Identities=15% Similarity=-0.110 Sum_probs=41.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|..++|.+.....+...|.+. .++|+ |+||+|||..||+.
T Consensus 328 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liRlsvGlE~~~dl~~dl~~ 377 (382)
T TIGR02080 328 GVESLIAHPATMTHAAMGPEARAEAGISD----TLLRLSVGLEDADDLIADLEQ 377 (382)
T ss_pred CCcceeECCCccCcccCCHHHHHhcCCCc----CeEEEEeccCCHHHHHHHHHH
Confidence 57778999999999998776666778888 99999 89999999999865
No 252
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=75.49 E-value=0.45 Score=55.27 Aligned_cols=49 Identities=12% Similarity=-0.153 Sum_probs=42.5
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQGL 452 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 452 (992)
.++|.+..|.-++|.+.....+.+.|.+. +++|+ |+||+|||..||+..
T Consensus 330 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liRlsvGlE~~~dli~Dl~~a 380 (388)
T PRK08861 330 GVESLICHPASMTHRAMGEEALAEAGVSQ----QLLRLSVGLEDAQDLIADLDQA 380 (388)
T ss_pred CCcceeeCCCcccccccCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHHH
Confidence 67888999999999988777777788888 99999 899999999999763
No 253
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=74.90 E-value=0.47 Score=55.11 Aligned_cols=48 Identities=15% Similarity=-0.152 Sum_probs=41.9
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.++.|..++|.+..+..+...|.|+ +++|+ |+||+|||..||+.
T Consensus 331 ~~~sl~~~~~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dli~dl~~ 380 (385)
T PRK08574 331 GVESLATYPVKSAASPIPEEDRKALGITE----DLVRLSVGLEDVEDLIEDLDQ 380 (385)
T ss_pred CCcceeeCCCcCCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 57778999999999988776666788888 99999 89999999999865
No 254
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=74.62 E-value=2.7 Score=48.35 Aligned_cols=152 Identities=18% Similarity=0.175 Sum_probs=74.7
Q ss_pred hHHHHHHhCCCCCCcEEEEEc--C--CCC--C--h-----hhHHHhhCCCCcEEEEeCCCC-----C---CCCCCeEEcC
Q 001947 210 RKEVRKELGIEDDVKLLILNF--G--GQP--A--G-----WKLKEEYLPSGWKCLVCGASD-----S---QLPPNFIKLP 268 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~--G--g~~--~--~-----~~ll~~l~~~~~~~Vv~G~~~-----~---~l~~nv~v~~ 268 (992)
+..+++.++++.++++|+.+. . ... . . .+.+..+...++.+++..... . ....++..+.
T Consensus 179 ~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~~~~~~~~~~l~~~~~~~~~li~k~Hp~~~~~~~~~~~~~~~i~~~~ 258 (369)
T PF04464_consen 179 RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKFFFSDLDFEKLNFLLKNNYVLIIKPHPNMKKKFKDFKEDNSNIIFVS 258 (369)
T ss_dssp HHHHHHHTT--SS-EEEEEE----GGG--GGSS----TT-HHHHHHHHTTTEEEEE--SHHHHTT----TT-TTTEEE-T
T ss_pred HHHHHHHhccCCCCcEEEEeeccccccccccccccccccCHHHHHHHhCCCcEEEEEeCchhhhchhhhhccCCcEEECC
Confidence 456778889888888776652 1 111 0 0 011112345677666543211 1 1245676665
Q ss_pred CCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHH----HHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 269 KDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLR----NMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 269 f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA----~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
...++.++|..||++||--. +.+.|.+.+++|+|+..... |+.... .-.+....|..+. +.++|..+|+
T Consensus 259 ~~~~~~~ll~~aDiLITDyS-Si~fD~~~l~KPiify~~D~--~~Y~~~rg~~~~~~~~~pg~~~~----~~~eL~~~i~ 331 (369)
T PF04464_consen 259 DNEDIYDLLAAADILITDYS-SIIFDFLLLNKPIIFYQPDL--EEYEKERGFYFDYEEDLPGPIVY----NFEELIEAIE 331 (369)
T ss_dssp T-S-HHHHHHT-SEEEESS--THHHHHGGGT--EEEE-TTT--TTTTTTSSBSS-TTTSSSS-EES----SHHHHHHHHT
T ss_pred CCCCHHHHHHhcCEEEEech-hHHHHHHHhCCCEEEEeccH--HHHhhccCCCCchHhhCCCceeC----CHHHHHHHHH
Confidence 44467799999999999765 68999999999999986432 221100 0012233343432 2356677777
Q ss_pred HHhhCCCCc-------------cCCCCHHHHHHHHHH
Q 001947 345 RAISLKPCY-------------EGGINGGEVAAHILQ 368 (992)
Q Consensus 345 ~ll~~~~~~-------------~~~~~G~~~aA~~I~ 368 (992)
.+++++... -.+++..+++++.|.
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I~ 368 (369)
T PF04464_consen 332 NIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYIF 368 (369)
T ss_dssp THHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHHH
T ss_pred hhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHHh
Confidence 765433211 146777888877775
No 255
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=74.42 E-value=20 Score=40.40 Aligned_cols=40 Identities=20% Similarity=-0.022 Sum_probs=27.6
Q ss_pred HHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCc
Q 001947 276 FMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQG 325 (992)
Q Consensus 276 lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~ 325 (992)
-|..-|+.++|+||.... +..=|-.++|. ...+.|++.|.
T Consensus 265 ~l~~~~~~~~HgGYD~~~---an~D~N~v~Pl-------D~LreL~~EG~ 304 (349)
T PF07355_consen 265 DLSSDDYMTIHGGYDPAY---ANEDPNRVFPL-------DRLRELEKEGV 304 (349)
T ss_pred CCCccceEeeccccChhH---hccCCCeeeeH-------HHHHHHHHcCC
Confidence 356788999999998753 55778888883 23455666554
No 256
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=74.22 E-value=0.45 Score=55.66 Aligned_cols=49 Identities=14% Similarity=-0.158 Sum_probs=41.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQGL 452 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 452 (992)
..+|.+..|..++|.+.....+...|.++ +++|+ ||||.|||+.||+..
T Consensus 337 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~liR~svGlE~~~dli~dl~~a 387 (405)
T PRK08776 337 GVESLIAHPASMTHAAMTAEARAAAGISD----GLLRLSVGIESAEDLLIDLRAG 387 (405)
T ss_pred CCceEEECCcccccccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHHH
Confidence 46678889999999988766666678888 99999 899999999999763
No 257
>PRK07503 methionine gamma-lyase; Provisional
Probab=73.33 E-value=0.65 Score=54.33 Aligned_cols=48 Identities=10% Similarity=-0.135 Sum_probs=40.9
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|++.....+...|.|. +++|+ |+||+|||..||+.
T Consensus 343 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 392 (403)
T PRK07503 343 DAESLAQHPASMTHSTYTPEERAEHGISE----GLVRLSVGLEDVADILADLAQ 392 (403)
T ss_pred CCCccCcCCCCCccccCCHHHHHhcCCCC----CeEEEEEecCCHHHHHHHHHH
Confidence 45667888999999988777777778888 99999 89999999999876
No 258
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=72.17 E-value=0.59 Score=54.20 Aligned_cols=48 Identities=13% Similarity=-0.063 Sum_probs=40.1
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++.....+.+.|.+. +++|+ ||||+|||..||+.
T Consensus 329 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liR~svGlE~~~dl~~dl~~ 378 (380)
T TIGR01325 329 DAKSTITHPATTTHGRMQPEERAAAGIGD----GLVRLSVGLEDVDDLIADLKR 378 (380)
T ss_pred CCCeeeeCCCccCcccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHh
Confidence 57778888999999988665555677777 99999 89999999999864
No 259
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=71.58 E-value=4 Score=49.26 Aligned_cols=76 Identities=8% Similarity=-0.001 Sum_probs=57.9
Q ss_pred CCeEEcCCCC--CHHHHHhhcCEEEecC---ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCCh
Q 001947 262 PNFIKLPKDA--YTPDFMAASDCMLGKI---GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLT 336 (992)
Q Consensus 262 ~nv~v~~f~~--~~p~lL~aaDlvIt~~---G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~ 336 (992)
..|.+.+|.. ++-..|..+.++|..+ |.+|.+||+++|+|+| .+ +. ...++...-|..+. + .
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~~~ieAiS~GiPqI--ny-g~------~~~V~d~~NG~li~--d--~ 475 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLYTQISGISAGIPQI--NK-VE------TDYVEHNKNGYIID--D--I 475 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheEEEECCCCCChHHHHHHHHcCCCee--ec-CC------ceeeEcCCCcEEeC--C--H
Confidence 5677888887 7778999999999754 7779999999999999 21 11 23466677787773 3 4
Q ss_pred hhHHHHHHHHhhCC
Q 001947 337 GHWKPYLERAISLK 350 (992)
Q Consensus 337 ~~l~~al~~ll~~~ 350 (992)
..|..+|..+|.++
T Consensus 476 ~~l~~al~~~L~~~ 489 (519)
T TIGR03713 476 SELLKALDYYLDNL 489 (519)
T ss_pred HHHHHHHHHHHhCH
Confidence 67888998888755
No 260
>cd00550 ArsA_ATPase Oxyanion-translocating ATPase (ArsA). This ATPase is involved in transport of arsenite, antimonite or other oxyanions across biological membranes in all three kingdoms of life. ArsA contains a highly conserved AAA motif present in the AAA+ ATPase superfamily associated with a variety of cellular activities. To form a functional ATP-driven pump, ArsA interacts with the permease ArsB, which is a channel-forming integral membrane protein. One of the most interesting features of ArsA is the allosteric activation by its transport substrates. A divalent cation, typically Mg2+, is required for its enzymatic activity.
Probab=70.05 E-value=32 Score=37.45 Aligned_cols=37 Identities=22% Similarity=0.407 Sum_probs=31.5
Q ss_pred EEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 18 Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
++++....|.|..+-+.++|..+.+.|+.|.++...+
T Consensus 2 ~~~~~gkgG~GKtt~a~~la~~~a~~g~~vLlvd~D~ 38 (254)
T cd00550 2 YIFFGGKGGVGKTTISAATAVRLAEQGKKVLLVSTDP 38 (254)
T ss_pred EEEEECCCCchHHHHHHHHHHHHHHCCCCceEEeCCC
Confidence 3456667779999999999999999999999997765
No 261
>COG0496 SurE Predicted acid phosphatase [General function prediction only]
Probab=68.73 E-value=41 Score=36.42 Aligned_cols=24 Identities=38% Similarity=0.495 Sum_probs=19.1
Q ss_pred cHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 29 HATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 29 Hv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
|.-=..+|+++|+ .+++|+++.+.
T Consensus 12 ~a~Gi~aL~~al~-~~~dV~VVAP~ 35 (252)
T COG0496 12 HAPGIRALARALR-EGADVTVVAPD 35 (252)
T ss_pred CCHHHHHHHHHHh-hCCCEEEEccC
Confidence 4444668999999 88999999765
No 262
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=68.35 E-value=16 Score=39.17 Aligned_cols=85 Identities=19% Similarity=0.291 Sum_probs=48.9
Q ss_pred CCCcEEEEEcCCCCCh--h------hHHHhhCCCCcEEEEeCCCCC--C-----C----CC-CeEEcCCCC--CHHHHHh
Q 001947 221 DDVKLLILNFGGQPAG--W------KLKEEYLPSGWKCLVCGASDS--Q-----L----PP-NFIKLPKDA--YTPDFMA 278 (992)
Q Consensus 221 ~d~~~Vlvs~Gg~~~~--~------~ll~~l~~~~~~~Vv~G~~~~--~-----l----~~-nv~v~~f~~--~~p~lL~ 278 (992)
.+++.|++..|+.... | ++.+.+....+.++++|...+ . + +. .+.+.+-.+ .+..+++
T Consensus 103 ~~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali~ 182 (247)
T PF01075_consen 103 KDKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQEKEIADQIAAGLQNPVINLAGKTSLRELAALIS 182 (247)
T ss_dssp TTSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHHHHHHHHHHTTHTTTTEEETTTS-HHHHHHHHH
T ss_pred ccCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHHHHHHHHHHHhcccceEeecCCCCHHHHHHHHh
Confidence 5677888877765542 2 344456555567777765544 1 1 22 344554432 2336788
Q ss_pred hcCEEEecCChhHHHHHHHcCCcEEEEe
Q 001947 279 ASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (992)
Q Consensus 279 aaDlvIt~~G~~Tv~Eal~~GvP~V~iP 306 (992)
.||++||.=. +.+.=|.+.|+|+|.+=
T Consensus 183 ~a~~~I~~Dt-g~~HlA~a~~~p~v~lf 209 (247)
T PF01075_consen 183 RADLVIGNDT-GPMHLAAALGTPTVALF 209 (247)
T ss_dssp TSSEEEEESS-HHHHHHHHTT--EEEEE
T ss_pred cCCEEEecCC-hHHHHHHHHhCCEEEEe
Confidence 9999999544 79999999999999995
No 263
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=66.76 E-value=13 Score=43.91 Aligned_cols=94 Identities=13% Similarity=0.131 Sum_probs=63.0
Q ss_pred CCcEEEEeCCCCC--C----C--CCCeEEcC-CCC-CHHHHHhhcCEEEe----cCChhHHHHHHHcCCcEEEEeCCCCC
Q 001947 246 SGWKCLVCGASDS--Q----L--PPNFIKLP-KDA-YTPDFMAASDCMLG----KIGYGTVSEALAYKLPFVFVRRDYFN 311 (992)
Q Consensus 246 ~~~~~Vv~G~~~~--~----l--~~nv~v~~-f~~-~~p~lL~aaDlvIt----~~G~~Tv~Eal~~GvP~V~iP~~~~~ 311 (992)
+++.+-+ |...+ . + -+|+++++ +.. .+.+++..||+.+. .+-.+++.||+.+|+|++......++
T Consensus 305 Pd~~f~I-ga~te~s~kL~~L~~y~nvvly~~~~~~~l~~ly~~~dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~ 383 (438)
T TIGR02919 305 PDYHFHI-AALTEMSSKLMSLDKYDNVKLYPNITTQKIQELYQTCDIYLDINHGNEILNAVRRAFEYNLLILGFEETAHN 383 (438)
T ss_pred CCcEEEE-EecCcccHHHHHHHhcCCcEEECCcChHHHHHHHHhccEEEEccccccHHHHHHHHHHcCCcEEEEecccCC
Confidence 6666655 44332 1 1 26776654 454 56689999999994 23456999999999999999865443
Q ss_pred ChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 312 EEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 312 EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.+ .+.. |..+...+ .+.+.++|.++|+++
T Consensus 384 ~~-----~i~~---g~l~~~~~--~~~m~~~i~~lL~d~ 412 (438)
T TIGR02919 384 RD-----FIAS---ENIFEHNE--VDQLISKLKDLLNDP 412 (438)
T ss_pred cc-----cccC---CceecCCC--HHHHHHHHHHHhcCH
Confidence 22 2222 55565555 478888998888765
No 264
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=65.63 E-value=0.9 Score=52.36 Aligned_cols=48 Identities=17% Similarity=-0.061 Sum_probs=39.4
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..++.+..|.-.+|.+.+...|...|.+. +++|+ ||||+|||..||+.
T Consensus 311 ~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~----~liRlsvGlE~~~dli~dl~~ 360 (364)
T PRK07269 311 GVESLITYPTTQTHADIPAEVRHSYGLTD----DLLRLSIGIEDARDLIADLKQ 360 (364)
T ss_pred CcCeEeeCCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 45567888988888887766666677777 99999 89999999999864
No 265
>PF02374 ArsA_ATPase: Anion-transporting ATPase; PDB: 2WOO_A 3IBG_B 3SJA_A 3H84_B 3SJD_A 3ZS9_A 3A37_A 2WOJ_A 3SJC_B 3A36_B ....
Probab=65.01 E-value=33 Score=38.53 Aligned_cols=39 Identities=18% Similarity=0.307 Sum_probs=32.3
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~ 55 (992)
+++|+..-.|.|=.+-+.++|-++.++|++|.+++..|.
T Consensus 2 r~~~~~GKGGVGKTT~aaA~A~~~A~~G~rtLlvS~Dpa 40 (305)
T PF02374_consen 2 RILFFGGKGGVGKTTVAAALALALARRGKRTLLVSTDPA 40 (305)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHHTTS-EEEEESSTT
T ss_pred eEEEEecCCCCCcHHHHHHHHHHHhhCCCCeeEeecCCC
Confidence 455666666799999999999999999999999988764
No 266
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=64.09 E-value=21 Score=42.07 Aligned_cols=71 Identities=13% Similarity=0.190 Sum_probs=56.8
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEE-EecCCCChhhHHHHHHHHhhCCC
Q 001947 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVE-MIRRDLLTGHWKPYLERAISLKP 351 (992)
Q Consensus 275 ~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~-v~~~~~~~~~l~~al~~ll~~~~ 351 (992)
.+++.||++|+.= +-++.=|+.+|+|+|.+++ | +....+++..|.... ++.++++++.|.+.+.+++++.+
T Consensus 323 ~iIs~~dl~ig~R-lHa~I~a~~~gvP~i~i~Y----~-~K~~~~~~~lg~~~~~~~~~~l~~~~Li~~v~~~~~~r~ 394 (426)
T PRK10017 323 KILGACELTVGTR-LHSAIISMNFGTPAIAINY----E-HKSAGIMQQLGLPEMAIDIRHLLDGSLQAMVADTLGQLP 394 (426)
T ss_pred HHHhhCCEEEEec-chHHHHHHHcCCCEEEeee----h-HHHHHHHHHcCCccEEechhhCCHHHHHHHHHHHHhCHH
Confidence 6789999999843 3466779999999999984 2 466778888998755 67788888899999999987653
No 267
>PLN02242 methionine gamma-lyase
Probab=64.05 E-value=1 Score=52.83 Aligned_cols=49 Identities=8% Similarity=-0.180 Sum_probs=41.9
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--cccc-ceeecCCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTED-FEILHGDCQGL 452 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~ 452 (992)
..++.++.|..++|.+.+...+...|.+. +++|+ |||| .|||+.||+..
T Consensus 361 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~----~liRlsvGlE~~~~dli~dl~~a 412 (418)
T PLN02242 361 YYETLMSCSGSSTSSELDPEEKAAAGISP----GLVRMSVGYTGTLEQRWSQFEKA 412 (418)
T ss_pred CCCceeeCCCccccccCCHHHHHhcCCCC----CeEEEEecCCCCHHHHHHHHHHH
Confidence 57778889999999988777777788888 99999 8995 99999999764
No 268
>COG0003 ArsA Predicted ATPase involved in chromosome partitioning [Cell division and chromosome partitioning]
Probab=62.98 E-value=58 Score=36.79 Aligned_cols=40 Identities=20% Similarity=0.371 Sum_probs=32.4
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~ 55 (992)
++|+||..-.|.|-.+-+.+.|-.|.+.|..|.+++..|.
T Consensus 2 ~riv~f~GKGGVGKTT~aaA~A~~lA~~g~kvLlvStDPA 41 (322)
T COG0003 2 TRIVFFTGKGGVGKTTIAAATAVKLAESGKKVLLVSTDPA 41 (322)
T ss_pred cEEEEEecCCcccHHHHHHHHHHHHHHcCCcEEEEEeCCC
Confidence 3555666666799999999999999999988888877663
No 269
>PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B.
Probab=62.48 E-value=13 Score=38.45 Aligned_cols=92 Identities=18% Similarity=0.221 Sum_probs=42.5
Q ss_pred ccCCCcccHHHHHHHHHHHHHC--CCcEEEEeCCCCc--ccccccCCCceeeeeecccCCcccccccccChHHHHHHHHH
Q 001947 22 VTGHGFGHATRVVEVVRNLISA--GHDVHVVTGAPDF--VFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSE 97 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~--GheV~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 97 (992)
++....|-+..+.+|+++|+++ ++.|.+-+..+.. ...+.+. +.+ .+.+ +..|..
T Consensus 26 iHa~SvGE~~a~~~Li~~l~~~~p~~~illT~~T~tg~~~~~~~~~-~~v-------~~~~-----~P~D~~-------- 84 (186)
T PF04413_consen 26 IHAASVGEVNAARPLIKRLRKQRPDLRILLTTTTPTGREMARKLLP-DRV-------DVQY-----LPLDFP-------- 84 (186)
T ss_dssp EE-SSHHHHHHHHHHHHHHTT---TS-EEEEES-CCHHHHHHGG-G-GG--------SEEE--------SSH--------
T ss_pred EEECCHHHHHHHHHHHHHHHHhCCCCeEEEEecCCchHHHHHHhCC-CCe-------EEEE-----eCccCH--------
Confidence 3566789999999999999987 6777666554321 1111110 000 0000 011211
Q ss_pred HhhccHHHhHHHHHHHHHcCCCcEEEE-CCCch--HHHHHHHcCCcEEEE
Q 001947 98 TAVAPRKSILKDEVEWLNSIKADLVVS-DVVPV--ACRAAADAGIRSVCV 144 (992)
Q Consensus 98 ~~~~~~~~~l~~~~~~L~~~kPDlVVs-D~~~~--a~~aA~~~gIP~v~i 144 (992)
....++|+.++||++|. ....| -...++..|||++.+
T Consensus 85 ----------~~~~rfl~~~~P~~~i~~EtElWPnll~~a~~~~ip~~Lv 124 (186)
T PF04413_consen 85 ----------WAVRRFLDHWRPDLLIWVETELWPNLLREAKRRGIPVVLV 124 (186)
T ss_dssp ----------HHHHHHHHHH--SEEEEES----HHHHHH-----S-EEEE
T ss_pred ----------HHHHHHHHHhCCCEEEEEccccCHHHHHHHhhcCCCEEEE
Confidence 12245678999999984 33443 445667889999987
No 270
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=61.46 E-value=1.3 Score=51.70 Aligned_cols=48 Identities=13% Similarity=-0.152 Sum_probs=41.3
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|.-++|.......+.+.|.+. .++|+ |+||+|||+.||+.
T Consensus 351 ~~~sl~~~p~~~~h~~~~~~~~~~~gi~~----~lvR~svGlE~~~dli~dl~~ 400 (403)
T PRK07810 351 DAKSLITHPATTTHRAMGPEGRAAIGLGD----GVVRLSVGLEDTDDLIADLDR 400 (403)
T ss_pred CCcceeeCCCccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 67888999999999988766666678887 89999 89999999999864
No 271
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=59.81 E-value=1.3 Score=51.02 Aligned_cols=48 Identities=17% Similarity=-0.084 Sum_probs=39.0
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|...+|.......+...|.+. +++|+ |+||+|||..||+.
T Consensus 317 ~~~sl~~~~~~~~~~~~~~~~~~~~g~~~----~liR~svGlE~~~dl~~dl~~ 366 (369)
T cd00614 317 GVESLVEHPASMTHSQLPPEERAAAGITP----GLVRLSVGIEDVEDLIADLEQ 366 (369)
T ss_pred CCceeeeCCcccccccCCHHHHHhcCCCC----CeEEEEeCcCCHHHHHHHHHH
Confidence 56778888999999877655555567777 99999 89999999999864
No 272
>PRK13932 stationary phase survival protein SurE; Provisional
Probab=58.45 E-value=99 Score=33.75 Aligned_cols=37 Identities=19% Similarity=0.232 Sum_probs=23.6
Q ss_pred ccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 14 ~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
++|+||. ...-|. |..=..+|+++|++.| +|+++.+.
T Consensus 4 ~~M~ILl-tNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~ 40 (257)
T PRK13932 4 KKPHILV-CNDDGI-EGEGIHVLAASMKKIG-RVTVVAPA 40 (257)
T ss_pred CCCEEEE-ECCCCC-CCHHHHHHHHHHHhCC-CEEEEcCC
Confidence 3567753 455542 2233558899999887 78888654
No 273
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=57.72 E-value=1.6 Score=50.23 Aligned_cols=47 Identities=13% Similarity=-0.070 Sum_probs=38.7
Q ss_pred CCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 401 PGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 401 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++.+..|..++|.+.+...|...|.++ .++|+ |+||+|||+.||+.
T Consensus 312 ~~sl~~~p~~~~~~~~~~~~r~~~gi~~----~~~R~svGlE~~~dl~~dl~~ 360 (366)
T PRK08247 312 VESFITYPATQTHADIPEEIRIANGVCN----RLLRFSVGIENVEDLIADLKQ 360 (366)
T ss_pred CceEEECCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 4456778988899887766666678888 89998 89999999999875
No 274
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=57.50 E-value=19 Score=31.99 Aligned_cols=52 Identities=17% Similarity=0.068 Sum_probs=36.5
Q ss_pred hhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 289 YGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 289 ~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
...+.|++++|+|+|.-+. ......+...--++..+ ++++|.+.+..+++++
T Consensus 12 ~~r~~E~~a~G~~vi~~~~------~~~~~~~~~~~~~~~~~----~~~el~~~i~~ll~~~ 63 (92)
T PF13524_consen 12 NMRIFEAMACGTPVISDDS------PGLREIFEDGEHIITYN----DPEELAEKIEYLLENP 63 (92)
T ss_pred chHHHHHHHCCCeEEECCh------HHHHHHcCCCCeEEEEC----CHHHHHHHHHHHHCCH
Confidence 3579999999999999653 23334443333455554 4688999999999866
No 275
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=56.43 E-value=35 Score=38.39 Aligned_cols=65 Identities=22% Similarity=0.230 Sum_probs=41.7
Q ss_pred hhCCCCcEEEEe-CCCCCC-----C---CCCeEEcCCCC--CHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeC
Q 001947 242 EYLPSGWKCLVC-GASDSQ-----L---PPNFIKLPKDA--YTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRR 307 (992)
Q Consensus 242 ~l~~~~~~~Vv~-G~~~~~-----l---~~nv~v~~f~~--~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~ 307 (992)
.+...++.+++. |...+. + .+++.+.+..+ .+..+++.||++||.-. +.+.=|.++|+|+|.+=-
T Consensus 205 ~l~~~~~~ivl~~G~~~e~~~~~~i~~~~~~~~l~g~~sL~elaali~~a~l~I~nDS-Gp~HlA~A~g~p~valfG 280 (322)
T PRK10964 205 LLAPSGLRIKLPWGAEHEEQRAKRLAEGFPYVEVLPKLSLEQVARVLAGAKAVVSVDT-GLSHLTAALDRPNITLYG 280 (322)
T ss_pred HHHHCCCeEEEeCCCHHHHHHHHHHHccCCcceecCCCCHHHHHHHHHhCCEEEecCC-cHHHHHHHhCCCEEEEEC
Confidence 443446667665 643221 1 22344444332 23367889999999544 799999999999999853
No 276
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=55.84 E-value=9.7 Score=48.20 Aligned_cols=68 Identities=16% Similarity=0.135 Sum_probs=47.8
Q ss_pred CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc---EEEE-eCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 272 YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP---FVFV-RRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~---G~~-Tv~Eal~~GvP---~V~i-P~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.++.+|+.||+++..+ |+| ++.|+++||+| ++++ ...+..++ + ..|+.+++.+ ++.+.++|
T Consensus 354 ~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~------l---~~~llv~P~d--~~~la~ai 422 (726)
T PRK14501 354 ELVALYRAADVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE------L---AEALLVNPND--IEGIAAAI 422 (726)
T ss_pred HHHHHHHhccEEEecccccccCcccceEEEEcCCCCceEEEecccchhHH------h---CcCeEECCCC--HHHHHHHH
Confidence 4668999999999754 655 78999999775 3333 32233322 2 2378888766 57899999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.++++++
T Consensus 423 ~~~l~~~ 429 (726)
T PRK14501 423 KRALEMP 429 (726)
T ss_pred HHHHcCC
Confidence 9999765
No 277
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=55.81 E-value=2.4 Score=49.30 Aligned_cols=45 Identities=18% Similarity=-0.013 Sum_probs=36.2
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|++.... .+|.+. +++|+ |+||+|||..||+.
T Consensus 338 ~~~sl~~~~~~~~~~~~~~~---~~gi~~----~liR~svGlE~~~dl~~dl~~ 384 (388)
T PRK07811 338 GVESLIEHPSAMTHASTAGS---QLEVPD----DLVRLSVGIEDVADLLADLEQ 384 (388)
T ss_pred CCcceEeCCcccCcccCCHh---hcCCCC----CEEEEEeCCCCHHHHHHHHHH
Confidence 45778888999999876532 457777 99999 89999999999864
No 278
>PRK09028 cystathionine beta-lyase; Provisional
Probab=52.71 E-value=3 Score=48.59 Aligned_cols=45 Identities=9% Similarity=-0.249 Sum_probs=34.3
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQGL 452 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 452 (992)
.++|.+..|.++++.+. ..++|.+. +++|+ ||||+|||..||+..
T Consensus 338 ~~~sLv~~p~~~~~~~~----~~~~~~~~----~liR~svGlEd~~dLi~Dl~~A 384 (394)
T PRK09028 338 GFESLILGVFGINKLRT----ATNWDFSK----PLIRLHIGLEDVDDLIADLEAG 384 (394)
T ss_pred CCcceeECCCCcCccCc----hhhhcCCC----CeEEEEeCcCCHHHHHHHHHHH
Confidence 57778888877765432 23467777 79998 899999999999864
No 279
>PRK08064 cystathionine beta-lyase; Provisional
Probab=51.96 E-value=2.4 Score=49.28 Aligned_cols=48 Identities=15% Similarity=-0.062 Sum_probs=39.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|.-++|....+..+...|.|. +++|+ ||||.|||.+||+.
T Consensus 329 ~~~sl~~~~~~~~h~~~~~~~~~~~gi~~----~liR~SvGle~~~dli~dl~~ 378 (390)
T PRK08064 329 AVESILSYPAKMSHAAMPKEERDERGITD----GLLRLSVGLENVDDLIADFEQ 378 (390)
T ss_pred CCcceeECCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 57778889988899987665555667777 89998 89999999999865
No 280
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=50.43 E-value=28 Score=37.32 Aligned_cols=38 Identities=26% Similarity=0.345 Sum_probs=27.4
Q ss_pred HHHHHHHcCC-----CcEEE-ECC--CchHHHHHHHcCCcEEEEec
Q 001947 109 DEVEWLNSIK-----ADLVV-SDV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 109 ~~~~~L~~~k-----PDlVV-sD~--~~~a~~aA~~~gIP~v~is~ 146 (992)
++.+.|...| ||+++ .|. .-.|..=|..+|||+|++.|
T Consensus 142 kL~k~lgGIk~m~~~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvD 187 (252)
T COG0052 142 KLEKSLGGIKDMKGLPDVLFVIDPRKEKIAVKEANKLGIPVVALVD 187 (252)
T ss_pred HHHHhhcchhhccCCCCEEEEeCCcHhHHHHHHHHHcCCCEEEEec
Confidence 3344444455 99888 565 56777889999999999943
No 281
>PRK05968 hypothetical protein; Provisional
Probab=48.11 E-value=2.8 Score=48.75 Aligned_cols=47 Identities=17% Similarity=-0.059 Sum_probs=37.1
Q ss_pred cCCCccccccccccccc-ccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAED-ELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+. |..++|+.. ....+...|.|. .++|+ |+||.|||..||+.
T Consensus 333 ~~~slv~-p~~~~~~~~~~~~~~~~~gi~~----~liR~SvGlE~~~dl~~dl~~ 382 (389)
T PRK05968 333 GHESLVV-PAEVVLQQKAQPNSAARFGVSP----RSVRLHVGLEGTEALWADLEQ 382 (389)
T ss_pred CCCceee-eCcccccccCCHHHHHhcCCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 4566777 999998874 345555667777 89998 89999999999875
No 282
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=44.91 E-value=45 Score=39.98 Aligned_cols=68 Identities=16% Similarity=0.096 Sum_probs=51.5
Q ss_pred HHHHHhhcCEEEecC---ChhH-HHHHHHcCC----cEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 273 TPDFMAASDCMLGKI---GYGT-VSEALAYKL----PFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 273 ~p~lL~aaDlvIt~~---G~~T-v~Eal~~Gv----P~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
+..+++.||+++..+ |+|. ..|.++|+. |+|+-...+..+| +.-++.+++-+ .+.+.++|.
T Consensus 375 l~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~---------l~~AllVNP~d--~~~~A~ai~ 443 (487)
T TIGR02398 375 VSAWFAMADVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVE---------LKGALLTNPYD--PVRMDETIY 443 (487)
T ss_pred HHHHHHhCCEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhh---------cCCCEEECCCC--HHHHHHHHH
Confidence 346889999999765 9885 559999998 7777665444433 34578888876 478999999
Q ss_pred HHhhCCC
Q 001947 345 RAISLKP 351 (992)
Q Consensus 345 ~ll~~~~ 351 (992)
++|+.+.
T Consensus 444 ~AL~m~~ 450 (487)
T TIGR02398 444 VALAMPK 450 (487)
T ss_pred HHHcCCH
Confidence 9998763
No 283
>PRK00346 surE 5'(3')-nucleotidase/polyphosphatase; Provisional
Probab=44.57 E-value=2e+02 Score=31.28 Aligned_cols=30 Identities=27% Similarity=0.360 Sum_probs=20.6
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
...-|. |..-..+|+++|.+. |+|+++.+.
T Consensus 6 TNDDGi-~a~Gi~aL~~~l~~~-~~V~VvAP~ 35 (250)
T PRK00346 6 TNDDGI-HAPGIRALAEALREL-ADVTVVAPD 35 (250)
T ss_pred ECCCCC-CChhHHHHHHHHHhC-CCEEEEeCC
Confidence 455542 333356889999988 799988664
No 284
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=43.78 E-value=1.9e+02 Score=29.59 Aligned_cols=31 Identities=3% Similarity=-0.111 Sum_probs=22.0
Q ss_pred cCCCcEEEECCC-chHHHHHHHc-CCcEEEEec
Q 001947 116 SIKADLVVSDVV-PVACRAAADA-GIRSVCVTN 146 (992)
Q Consensus 116 ~~kPDlVVsD~~-~~a~~aA~~~-gIP~v~is~ 146 (992)
.+.||+|+++.. -.++.+-... ++|.+++.-
T Consensus 64 Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~E 96 (171)
T PF12000_consen 64 GFVPDVIIAHPGWGETLFLKDVFPDAPLIGYFE 96 (171)
T ss_pred CCCCCEEEEcCCcchhhhHHHhCCCCcEEEEEE
Confidence 578999999984 3444455555 899988743
No 285
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=42.20 E-value=97 Score=35.04 Aligned_cols=29 Identities=24% Similarity=0.350 Sum_probs=23.3
Q ss_pred CCcEEE-ECC--CchHHHHHHHcCCcEEEEec
Q 001947 118 KADLVV-SDV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 118 kPDlVV-sD~--~~~a~~aA~~~gIP~v~is~ 146 (992)
.||+|| .|. ...+..=|..+|||+|++.|
T Consensus 152 ~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivD 183 (326)
T PRK12311 152 LPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVD 183 (326)
T ss_pred CCCEEEEeCCccchHHHHHHHHcCCCEEEEee
Confidence 699988 454 66777888999999999843
No 286
>PF00551 Formyl_trans_N: Formyl transferase; InterPro: IPR002376 A number of formyl transferases belong to this group. Methionyl-tRNA formyltransferase transfers a formyl group onto the amino terminus of the acyl moiety of the methionyl aminoacyl-tRNA. The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and by impairing its binding to EFTU-GTP. Formyltetrahydrofolate dehydrogenase produces formate from formyl- tetrahydrofolate. This is the N-terminal domain of these enzymes and is found upstream of the C-terminal domain (IPR005793 from INTERPRO). The trifunctional glycinamide ribonucleotide synthetase-aminoimidazole ribonucleotide synthetase-glycinamide ribonucleotide transformylase catalyses the second, third and fifth steps in de novo purine biosynthesis. The glycinamide ribonucleotide transformylase belongs to this group.; GO: 0016742 hydroxymethyl-, formyl- and related transferase activity, 0009058 biosynthetic process; PDB: 3P9X_B 3OBI_A 3R8X_A 3KCQ_C 3RFO_D 3AV3_A 3N0V_D 3LOU_A 3O1L_A 4DS3_A ....
Probab=41.17 E-value=81 Score=32.34 Aligned_cols=27 Identities=19% Similarity=0.527 Sum_probs=19.9
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCc
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHD 46 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~Ghe 46 (992)
|||+|+++|.| +-...+.++|.+.++.
T Consensus 1 mrI~~~~Sg~~----~~~~~~l~~l~~~~~~ 27 (181)
T PF00551_consen 1 MRIVFFGSGSG----SFLKALLEALKARGHN 27 (181)
T ss_dssp EEEEEEESSSS----HHHHHHHHHHHTTSSE
T ss_pred CEEEEEEcCCC----HHHHHHHHHHHhCCCC
Confidence 57877766554 4466678899999997
No 287
>PRK05986 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase; Validated
Probab=40.79 E-value=2.3e+02 Score=29.51 Aligned_cols=30 Identities=30% Similarity=0.422 Sum_probs=26.7
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
+.+|.|.|-.+.++.+|-+....|+.|.++
T Consensus 27 v~~g~GkGKtt~a~g~a~ra~g~G~~V~iv 56 (191)
T PRK05986 27 VHTGNGKGKSTAAFGMALRAVGHGKKVGVV 56 (191)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEE
Confidence 357899999999999999999999999876
No 288
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=40.16 E-value=5 Score=46.45 Aligned_cols=49 Identities=10% Similarity=-0.080 Sum_probs=32.9
Q ss_pred hhhhcc-cCCCcccccc-cccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 394 GYELQR-VPGRDVSIPE-WYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 394 ~~~~q~-~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
+...+. .++|.+..|. .++|.+. ..+|.+. +++|+ |+||+|||..||+.
T Consensus 320 ~~~~slG~~~sl~~~~~~~~~~~~~-----~~~~~~~----~liR~svGlE~~~dl~~dl~~ 372 (377)
T TIGR01324 320 GLGYSWGGYESLALCNQPELGHRPN-----IKRNLEG----PLIRVHIGLENVDDLKADLKA 372 (377)
T ss_pred eEeccCCCccceeecCCCCCCHHHH-----HhccCCC----CEEEEEeCCCCHHHHHHHHHH
Confidence 333333 5666665211 4677653 3566666 79998 89999999999875
No 289
>TIGR00087 surE 5'/3'-nucleotidase SurE. E. coli SurE is Recommended cutoffs are 15 for homology, 40 for probable orthology, and 200 for orthology with full-length homology.
Probab=39.38 E-value=1.9e+02 Score=31.27 Aligned_cols=30 Identities=27% Similarity=0.438 Sum_probs=19.9
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
...-|. |.--..+|+++|++.| +|+++.+.
T Consensus 6 tNDDGi-~a~Gi~aL~~~l~~~g-~V~VvAP~ 35 (244)
T TIGR00087 6 TNDDGI-HSPGIRALYQALKELG-EVTVVAPA 35 (244)
T ss_pred ECCCCC-CCHhHHHHHHHHHhCC-CEEEEeCC
Confidence 454441 2233558999999888 89888654
No 290
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=37.40 E-value=1.9e+02 Score=33.01 Aligned_cols=28 Identities=18% Similarity=0.366 Sum_probs=24.9
Q ss_pred hcCEEEecCChhH---HHHHHHcCCcEEEEe
Q 001947 279 ASDCMLGKIGYGT---VSEALAYKLPFVFVR 306 (992)
Q Consensus 279 aaDlvIt~~G~~T---v~Eal~~GvP~V~iP 306 (992)
.-|++|+++||-+ +.-|..+|+|+++..
T Consensus 91 kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e 121 (352)
T PRK12446 91 KPDVIFSKGGFVSVPVVIGGWLNRVPVLLHE 121 (352)
T ss_pred CCCEEEecCchhhHHHHHHHHHcCCCEEEEC
Confidence 3899999999986 899999999999863
No 291
>cd00561 CobA_CobO_BtuR ATP:corrinoid adenosyltransferase BtuR/CobO/CobP. This family consists of the BtuR, CobO, CobP proteins all of which are Cob(I)alamin (vitamin B12) adenosyltransferase, which is involved in cobalamin (vitamin B12) biosynthesis. This enzyme is a homodimer, which catalyzes the adenosylation reaction: ATP + cob(I)alamin + H2O <= phosphate + diphosphate + adenosylcobalamin.
Probab=37.19 E-value=3.1e+02 Score=27.60 Aligned_cols=29 Identities=31% Similarity=0.431 Sum_probs=25.7
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
.+|.|.|-.+.++.+|-+...+|+.|.|+
T Consensus 8 y~g~G~Gkt~~a~g~~~ra~~~g~~v~~v 36 (159)
T cd00561 8 YTGNGKGKTTAALGLALRALGHGYRVGVV 36 (159)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCeEEEE
Confidence 36889999999999999999999999874
No 292
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=36.46 E-value=54 Score=33.00 Aligned_cols=38 Identities=26% Similarity=0.326 Sum_probs=28.5
Q ss_pred HHhhcCEEEecC-ChhH---HHHHHHcCCcEEEEeCCCCCCh
Q 001947 276 FMAASDCMLGKI-GYGT---VSEALAYKLPFVFVRRDYFNEE 313 (992)
Q Consensus 276 lL~aaDlvIt~~-G~~T---v~Eal~~GvP~V~iP~~~~~EQ 313 (992)
+...+|++|.-+ |.|| +.|++.+++|+++++..++.+-
T Consensus 88 m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~~g~~~~ 129 (159)
T TIGR00725 88 LVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRGTGGWTD 129 (159)
T ss_pred HHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEECCCcchH
Confidence 446799999754 5555 5678999999999997765543
No 293
>cd02037 MRP-like MRP (Multiple Resistance and pH adaptation) is a homologue of the Fer4_NifH superfamily. Like the other members of the superfamily, MRP contains a ATP-binding domain at the N-termini. It is found in bacteria as a membrane-spanning protein and functions as a Na+/H+ antiporter.
Probab=36.43 E-value=1.9e+02 Score=28.85 Aligned_cols=37 Identities=22% Similarity=0.245 Sum_probs=31.5
Q ss_pred EEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 18 Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
|++...-.|.|=.+-+..||..|.+.|+.|.++-..+
T Consensus 2 i~v~s~kgG~GKTt~a~~LA~~la~~g~~vllvD~D~ 38 (169)
T cd02037 2 IAVMSGKGGVGKSTVAVNLALALAKLGYKVGLLDADI 38 (169)
T ss_pred EEEecCCCcCChhHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 4556677889999999999999999999999986553
No 294
>PF05014 Nuc_deoxyrib_tr: Nucleoside 2-deoxyribosyltransferase; InterPro: IPR007710 Nucleoside 2-deoxyribosyltransferase (2.4.2.6 from EC) catalyses the cleavage of the glycosidic bonds of 2-deoxyribonucleosides. Nucleoside 2-deoxyribosyltransferases can be divided into two groups based on their substrate specificity: class I enzymes are specific for the transfer of deoxyribose between two purines, while class II enzymes will transfer the deoxyribose between either purines or pyrimidines. The structure of the class I [] and class II [] enzymes are very similar. In class I enzymes, the purine base shields the active site from solvent, which the smaller pyrimidine base cannot do, while in class II enzymes the active site is shielded by a loop (residues 48-62). Both classes of enzymes are found in various Lactobacillus species and participate in nucleoside recycling in these microorganisms. This entry represents both classes of enzymes.; GO: 0050144 nucleoside deoxyribosyltransferase activity, 0070694 deoxyribonucleoside 5'-monophosphate N-glycosidase activity, 0009159 deoxyribonucleoside monophosphate catabolic process; PDB: 1S2L_A 1S2D_C 1S2I_A 1S3F_B 1S2G_C 2A0K_A 2F67_A 2F64_B 2F62_A 2F2T_A ....
Probab=36.15 E-value=39 Score=31.65 Aligned_cols=35 Identities=23% Similarity=0.295 Sum_probs=27.2
Q ss_pred HHHhhcCEEEe---c--CChhHHHH---HHHcCCcEEEEeCCC
Q 001947 275 DFMAASDCMLG---K--IGYGTVSE---ALAYKLPFVFVRRDY 309 (992)
Q Consensus 275 ~lL~aaDlvIt---~--~G~~Tv~E---al~~GvP~V~iP~~~ 309 (992)
+.|..||++|. . .+.||.+| |.+.|+|++++....
T Consensus 57 ~~i~~~D~via~l~~~~~d~Gt~~ElG~A~algkpv~~~~~d~ 99 (113)
T PF05014_consen 57 EGIRECDIVIANLDGFRPDSGTAFELGYAYALGKPVILLTEDD 99 (113)
T ss_dssp HHHHHSSEEEEEECSSS--HHHHHHHHHHHHTTSEEEEEECCC
T ss_pred HHHHHCCEEEEECCCCCCCCcHHHHHHHHHHCCCEEEEEEcCC
Confidence 57789999995 2 57899999 577899999998543
No 295
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=36.00 E-value=67 Score=33.01 Aligned_cols=39 Identities=15% Similarity=0.304 Sum_probs=28.5
Q ss_pred HHHhhcCEEEec-CChhHHHHHHH---------cCCcEEEEeCCCCCCh
Q 001947 275 DFMAASDCMLGK-IGYGTVSEALA---------YKLPFVFVRRDYFNEE 313 (992)
Q Consensus 275 ~lL~aaDlvIt~-~G~~Tv~Eal~---------~GvP~V~iP~~~~~EQ 313 (992)
.++..+|+||.- +|.||+-|.+. +.+|++++...++.+.
T Consensus 92 ~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n~~g~~~~ 140 (178)
T TIGR00730 92 MMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFNVNGHFDG 140 (178)
T ss_pred HHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEECCcchHHH
Confidence 355789999974 57788777643 4999999986555554
No 296
>PF03641 Lysine_decarbox: Possible lysine decarboxylase; InterPro: IPR005269 This entry represents a cytokinin-activating enzyme working in the direct activation pathway. It is a phosphoribohydrolase that converts inactive cytokinin nucleotides to the biologically active free-base forms [, ]. The proteins in this entry belong to the LOG family of proteins.; PDB: 1YDH_B 2Q4D_A 1RCU_C 1WEH_B 3SBX_F 3BQ9_B 2PMB_D 3GH1_D 1WEK_C 3QUA_A ....
Probab=35.41 E-value=74 Score=30.88 Aligned_cols=39 Identities=23% Similarity=0.404 Sum_probs=26.9
Q ss_pred HHHhhcCEEEe-cCChhHHHHHH---H------cCC-cEEEEeCCCCCCh
Q 001947 275 DFMAASDCMLG-KIGYGTVSEAL---A------YKL-PFVFVRRDYFNEE 313 (992)
Q Consensus 275 ~lL~aaDlvIt-~~G~~Tv~Eal---~------~Gv-P~V~iP~~~~~EQ 313 (992)
.++..||++|. .||.||+.|.. . +.+ |+|++...++.+.
T Consensus 49 ~m~~~sda~I~lPGG~GTl~El~~~~~~~~l~~~~~~Piil~~~~g~w~~ 98 (133)
T PF03641_consen 49 IMIESSDAFIALPGGIGTLDELFEALTLMQLGRHNKVPIILLNIDGFWDP 98 (133)
T ss_dssp HHHHHESEEEEES-SHHHHHHHHHHHHHHHTTSSTS-EEEEEECGGCCHH
T ss_pred HHHHhCCEEEEEecCCchHHHHHHHHHHHhhccccCCCEEEeCCcchHHH
Confidence 35578999986 56778877654 3 345 9999997666654
No 297
>COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis]
Probab=33.85 E-value=1.2e+02 Score=35.07 Aligned_cols=70 Identities=19% Similarity=0.252 Sum_probs=51.8
Q ss_pred HHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCc-EEEEecCCCChhhHHHHHHHHhhCC
Q 001947 275 DFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQG-GVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 275 ~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~-Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
..+++||++|+ .=+-++.=|++.|+|.|.+.+. +.+...+++.|. +..+...+++++.+...+.+-+.+.
T Consensus 281 ~~l~~~dl~Vg-~R~HsaI~al~~g~p~i~i~Y~-----~K~~~l~~~~gl~~~~~~i~~~~~~~l~~~~~e~~~~~ 351 (385)
T COG2327 281 GILAACDLIVG-MRLHSAIMALAFGVPAIAIAYD-----PKVRGLMQDLGLPGFAIDIDPLDAEILSAVVLERLTKL 351 (385)
T ss_pred HHhccCceEEe-ehhHHHHHHHhcCCCeEEEeec-----HHHHHHHHHcCCCcccccCCCCchHHHHHHHHHHHhcc
Confidence 46789999998 4455777799999999999743 456677788877 4555666777777777777766544
No 298
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism]
Probab=32.90 E-value=68 Score=37.41 Aligned_cols=40 Identities=25% Similarity=0.370 Sum_probs=31.8
Q ss_pred EEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcc
Q 001947 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFV 57 (992)
Q Consensus 18 Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~ 57 (992)
|++.-+..|.|-.+-++.|+++|+++|++|.-+-..|+++
T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPDYI 42 (451)
T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPDYI 42 (451)
T ss_pred eEEecCCCCCcHHHHHHHHHHHHHhcCCcccccccCCCcc
Confidence 3346778889999999999999999999998664445443
No 299
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=31.93 E-value=2e+02 Score=29.91 Aligned_cols=31 Identities=29% Similarity=0.346 Sum_probs=23.6
Q ss_pred cCCCcEEEE-CC--CchHHHHHHHcCCcEEEEec
Q 001947 116 SIKADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 116 ~~kPDlVVs-D~--~~~a~~aA~~~gIP~v~is~ 146 (992)
...||+||. |. ...+..=|..++||+|++.|
T Consensus 125 ~~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~D 158 (193)
T cd01425 125 FRLPDLVIVLDPRKEHQAIREASKLGIPVIAIVD 158 (193)
T ss_pred ccCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 347999994 53 55667778899999999944
No 300
>TIGR00708 cobA cob(I)alamin adenosyltransferase. Alternate name: corrinoid adenosyltransferase.
Probab=31.36 E-value=4e+02 Score=27.29 Aligned_cols=30 Identities=27% Similarity=0.410 Sum_probs=26.3
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
+.+|.|.|-.+-++.+|-+...+|+.|.++
T Consensus 10 v~~g~GkGKtt~a~g~a~ra~~~g~~v~iv 39 (173)
T TIGR00708 10 VHTGNGKGKTTAAFGMALRALGHGKKVGVI 39 (173)
T ss_pred EECCCCCChHHHHHHHHHHHHHCCCeEEEE
Confidence 347899999999999999999999999654
No 301
>PF02441 Flavoprotein: Flavoprotein; InterPro: IPR003382 This entry contains a diverse range of flavoprotein enzymes, including epidermin biosynthesis protein, EpiD, which has been shown to be a flavoprotein that binds FMN []. This enzyme catalyzes the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance []. Dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenylacrylic acid decarboxylase 4.1.1 from EC [].; GO: 0003824 catalytic activity; PDB: 3QJG_L 1G63_G 1G5Q_L 1P3Y_1 1QZU_A 1E20_A 1MVN_A 1MVL_A 3ZQU_A 2EJB_A ....
Probab=31.22 E-value=57 Score=31.38 Aligned_cols=35 Identities=31% Similarity=0.323 Sum_probs=26.2
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
+|++.++| .++...+..+.++|+++|++|.++-..
T Consensus 2 ~i~l~vtG--s~~~~~~~~~l~~L~~~g~~v~vv~S~ 36 (129)
T PF02441_consen 2 RILLGVTG--SIAAYKAPDLLRRLKRAGWEVRVVLSP 36 (129)
T ss_dssp EEEEEE-S--SGGGGGHHHHHHHHHTTTSEEEEEESH
T ss_pred EEEEEEEC--HHHHHHHHHHHHHHhhCCCEEEEEECC
Confidence 45556664 467777999999999999999877443
No 302
>PRK06849 hypothetical protein; Provisional
Probab=30.79 E-value=1.9e+02 Score=33.48 Aligned_cols=23 Identities=26% Similarity=0.377 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHCCCcEEEEeCCC
Q 001947 32 RVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 32 r~laLA~~L~~~GheV~~~~~~~ 54 (992)
-++.+|+.|.+.||+|+++...+
T Consensus 16 ~~l~iar~l~~~G~~Vi~~d~~~ 38 (389)
T PRK06849 16 AALELARLFHNAGHTVILADSLK 38 (389)
T ss_pred HHHHHHHHHHHCCCEEEEEeCCc
Confidence 58999999999999999886654
No 303
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated
Probab=30.69 E-value=2.8e+02 Score=32.95 Aligned_cols=40 Identities=25% Similarity=0.316 Sum_probs=31.2
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
|+++.| .-++.|.|=.+-+..|+++|+++|++|..+-..+
T Consensus 3 m~~i~I--~gt~s~~GKT~it~~L~~~L~~~G~~V~~fK~Gp 42 (451)
T PRK01077 3 MPALVI--AAPASGSGKTTVTLGLMRALRRRGLRVQPFKVGP 42 (451)
T ss_pred CcEEEE--EeCCCCCcHHHHHHHHHHHHHhCCCCcceeecCC
Confidence 544433 5567778999999999999999999998775443
No 304
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=29.98 E-value=3.2e+02 Score=36.38 Aligned_cols=24 Identities=17% Similarity=0.241 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 31 TRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 31 ~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
.-|..++++|++.|++|.++...+
T Consensus 576 y~~v~~~~aLk~~G~~vI~vn~np 599 (1068)
T PRK12815 576 YSSVHAAFALKKEGYETIMINNNP 599 (1068)
T ss_pred hhHHHHHHHHHHcCCEEEEEeCCc
Confidence 367888999999999999887765
No 305
>KOG3339 consensus Predicted glycosyltransferase [General function prediction only]
Probab=29.86 E-value=1.8e+02 Score=29.88 Aligned_cols=33 Identities=21% Similarity=0.316 Sum_probs=23.0
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
+.+ +.+.|.| ||..-.+.|.++|.++--.-+++
T Consensus 39 ~~~-lVvlGSG-GHT~EMlrLl~~l~~~y~~r~yI 71 (211)
T KOG3339|consen 39 LST-LVVLGSG-GHTGEMLRLLEALQDLYSPRSYI 71 (211)
T ss_pred ceE-EEEEcCC-CcHHHHHHHHHHHHhhcCceEEE
Confidence 445 2355666 99999999999998774333444
No 306
>PRK08114 cystathionine beta-lyase; Provisional
Probab=29.53 E-value=11 Score=44.05 Aligned_cols=46 Identities=11% Similarity=-0.189 Sum_probs=28.4
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.++.|.-.++...+ ....++.+. .++|+ ||||+|||..||+.
T Consensus 342 g~~SLi~~~~~~~~~~~~--~~~~~~~~~----~liRlSvGlEd~~DLi~Dl~~ 389 (395)
T PRK08114 342 GFESLILANQPEEIAAIR--PAGEVDFTG----TLIRLHIGLEDVDDLIADLAA 389 (395)
T ss_pred CccceeccCCchhhhccC--ChhHhcCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 466667643112222111 111355555 89999 89999999999975
No 307
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=28.14 E-value=9.5e+02 Score=27.51 Aligned_cols=118 Identities=14% Similarity=0.204 Sum_probs=73.2
Q ss_pred CCCcEEEEEcCCCCCh--hhH-HHhh---------CC---CCcEEEEeCCCCCC------C-CCC---eEE-cCCC--CC
Q 001947 221 DDVKLLILNFGGQPAG--WKL-KEEY---------LP---SGWKCLVCGASDSQ------L-PPN---FIK-LPKD--AY 272 (992)
Q Consensus 221 ~d~~~Vlvs~Gg~~~~--~~l-l~~l---------~~---~~~~~Vv~G~~~~~------l-~~n---v~v-~~f~--~~ 272 (992)
+++|-++||.-|.... ..+ ++++ .. +...++++|.++.. + ..| +.+ .++. ++
T Consensus 252 ~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKGPlkE~Y~~~I~~~~~~~v~~~tpWL~aED 331 (444)
T KOG2941|consen 252 PERPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKGPLKEKYSQEIHEKNLQHVQVCTPWLEAED 331 (444)
T ss_pred cCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCCchhHHHHHHHHHhcccceeeeeccccccc
Confidence 5678899988776542 222 2221 11 34567888876531 2 123 332 1221 34
Q ss_pred HHHHHhhcCEEEe----cCCh---hHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 001947 273 TPDFMAASDCMLG----KIGY---GTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (992)
Q Consensus 273 ~p~lL~aaDlvIt----~~G~---~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ 345 (992)
-|.+|+.||+=|| .+|. .-|..-.-||+|++++..+ ..-+.+++.-.|.+... .++|.+.+.-
T Consensus 332 YP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk------cl~ELVkh~eNGlvF~D----s~eLa~ql~~ 401 (444)
T KOG2941|consen 332 YPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK------CLDELVKHGENGLVFED----SEELAEQLQM 401 (444)
T ss_pred chhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch------hHHHHHhcCCCceEecc----HHHHHHHHHH
Confidence 4789999999996 3453 3677888999999999743 33345666667887764 4567777777
Q ss_pred Hhh
Q 001947 346 AIS 348 (992)
Q Consensus 346 ll~ 348 (992)
+.+
T Consensus 402 lf~ 404 (444)
T KOG2941|consen 402 LFK 404 (444)
T ss_pred HHh
Confidence 775
No 308
>cd03109 DTBS Dethiobiotin synthetase (DTBS) is the penultimate enzyme in the biotin biosynthesis pathway in Escherichia coli and other microorganisms. The enzyme catalyzes formation of the ureido ring of dethiobiotin from (7R,8S)-7,8-diaminononanoic acid (DAPA) and carbon dioxide. The enzyme utilizes carbon dioxide instead of hydrogen carbonate as substrate and is dependent on ATP and divalent metal ions as cofactors.
Probab=27.23 E-value=84 Score=30.46 Aligned_cols=36 Identities=19% Similarity=0.242 Sum_probs=31.5
Q ss_pred EEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 18 FAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 18 Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
|+||++|.|.|=..-+..+++.|+++|..|.++-..
T Consensus 1 ~~~~~~~~~~Gkt~~~~~l~~~l~~~~~~v~~~kp~ 36 (134)
T cd03109 1 IMGFGTGTDIGKTVATAILARALKEKGYRVAPLKPV 36 (134)
T ss_pred CEEEeCCCCcCHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 356789999999999999999999999999888544
No 309
>PRK05967 cystathionine beta-lyase; Provisional
Probab=26.41 E-value=12 Score=43.48 Aligned_cols=24 Identities=17% Similarity=-0.064 Sum_probs=20.2
Q ss_pred CCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 424 RSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 424 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
+|.+. +++|+ |+||+|||..||+.
T Consensus 362 ~~~~~----~liRlSvGlEd~~dLi~Dl~~ 387 (395)
T PRK05967 362 APYAG----PVIRLQIGLEDVPDLKADLER 387 (395)
T ss_pred ccCCC----CeEEEEeccCCHHHHHHHHHH
Confidence 45555 79998 89999999999976
No 310
>PRK08305 spoVFB dipicolinate synthase subunit B; Reviewed
Probab=25.48 E-value=1e+02 Score=32.23 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=27.5
Q ss_pred EEEEEeccCCCcccHHH-HHHHHHHHHHCCCcEEEEeCC
Q 001947 16 LVFAYYVTGHGFGHATR-VVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r-~laLA~~L~~~GheV~~~~~~ 53 (992)
.+|++.++ |...+.. +..+++.|+++||+|+++...
T Consensus 6 k~IllgVT--Gsiaa~k~a~~lir~L~k~G~~V~vv~T~ 42 (196)
T PRK08305 6 KRIGFGLT--GSHCTYDEVMPEIEKLVDEGAEVTPIVSY 42 (196)
T ss_pred CEEEEEEc--CHHHHHHHHHHHHHHHHhCcCEEEEEECH
Confidence 45555665 5577888 699999999999999877543
No 311
>PRK00994 F420-dependent methylenetetrahydromethanopterin dehydrogenase; Provisional
Probab=25.22 E-value=83 Score=33.47 Aligned_cols=37 Identities=22% Similarity=0.269 Sum_probs=24.8
Q ss_pred HHHHHcCCCcEEEECC---CchHHHHHH----HcCCcEEEEecC
Q 001947 111 VEWLNSIKADLVVSDV---VPVACRAAA----DAGIRSVCVTNF 147 (992)
Q Consensus 111 ~~~L~~~kPDlVVsD~---~~~a~~aA~----~~gIP~v~is~~ 147 (992)
...+++|+||++|.-. ...+...|+ ..|+|+|.+++-
T Consensus 53 ~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~ 96 (277)
T PRK00994 53 KKMLEEWKPDFVIVISPNPAAPGPKKAREILKAAGIPCIVIGDA 96 (277)
T ss_pred HHHHHhhCCCEEEEECCCCCCCCchHHHHHHHhcCCCEEEEcCC
Confidence 4456899999999654 223344443 358999999763
No 312
>PRK07414 cob(I)yrinic acid a,c-diamide adenosyltransferase; Validated
Probab=24.55 E-value=4e+02 Score=27.38 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=24.2
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
+.+|.|-|=.+.++.+|-+-..+|..|.++
T Consensus 26 VYtGdGKGKTTAAlGlalRAaG~G~rV~ii 55 (178)
T PRK07414 26 VFTSSQRNFFTSVMAQALRIAGQGTPVLIV 55 (178)
T ss_pred EEeCCCCCchHHHHHHHHHHhcCCCEEEEE
Confidence 347999999999988887777777788765
No 313
>KOG0832 consensus Mitochondrial/chloroplast ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=24.49 E-value=74 Score=33.70 Aligned_cols=108 Identities=17% Similarity=0.120 Sum_probs=59.3
Q ss_pred CCcccHHHHHHHHHHHHHCCCcEEEEeCCCCccc--c-cccCCCceeeeeecccCCcccccccccChHHHHHHHHHHhhc
Q 001947 25 HGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVF--T-SEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYSETAVA 101 (992)
Q Consensus 25 ~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~--~-~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 101 (992)
.-.-|+.+++.+...+..+|-.+.|++..+.+.. . .......+.+.. .|-.|++. .... ....+..-+
T Consensus 89 qT~~~Lr~A~~fVa~vA~r~GiILFv~tn~~~~~~ve~aA~r~~gy~~~~-~w~~G~lT-----N~~~-l~g~~~~~~-- 159 (251)
T KOG0832|consen 89 QTASYLRRALNFVAHVAHRGGIILFVGTNNGFKDLVERAARRAGGYSHNR-KWLGGLLT-----NARE-LFGALVRKF-- 159 (251)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEecCcchHHHHHHHHHHhcCceeee-eeccceee-----cchh-hcccccccc--
Confidence 3356789999999999999988999977653211 1 111111111111 12223321 0000 000000000
Q ss_pred cHHHhHHHHHHHHHcCCCcEEEE-CC--CchHHHHHHHcCCcEEEE
Q 001947 102 PRKSILKDEVEWLNSIKADLVVS-DV--VPVACRAAADAGIRSVCV 144 (992)
Q Consensus 102 ~~~~~l~~~~~~L~~~kPDlVVs-D~--~~~a~~aA~~~gIP~v~i 144 (992)
.-..+...++....||+||. |. ...+++-|.+++||.|.+
T Consensus 160 ---~~~pd~~~f~~t~~~D~vvvln~~e~~sAilEA~K~~IPTIgI 202 (251)
T KOG0832|consen 160 ---LSLPDALCFLPTLTPDLVVVLNPEENHSAILEAAKMAIPTIGI 202 (251)
T ss_pred ---cCCCcceeecccCCcceeEecCcccccHHHHHHHHhCCCeEEE
Confidence 01233455667788999995 43 556788889999999998
No 314
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=23.35 E-value=12 Score=42.35 Aligned_cols=37 Identities=14% Similarity=-0.063 Sum_probs=24.9
Q ss_pred ccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 411 YQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
-+|.+.....+.+.|... ++||| ||||.+|++.||++
T Consensus 383 TTH~ql~~ee~~~aGv~~----~~IRlSVGIEd~~DiiaDl~q 421 (426)
T COG2873 383 TTHRQLSEEEQAAAGVTP----DLIRLSVGIEDIDDIIADLEQ 421 (426)
T ss_pred cchhcCCHHHHHhcCCCC----CcEEEEeccCCHHHHHHHHHH
Confidence 344444333333334444 99999 89999999999975
No 315
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=23.13 E-value=99 Score=32.30 Aligned_cols=30 Identities=27% Similarity=0.385 Sum_probs=23.8
Q ss_pred CCCcEEE-ECC--CchHHHHHHHcCCcEEEEec
Q 001947 117 IKADLVV-SDV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 117 ~kPDlVV-sD~--~~~a~~aA~~~gIP~v~is~ 146 (992)
..||+|| .|. ...+..=|..+|||+|++.|
T Consensus 107 ~~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~D 139 (196)
T TIGR01012 107 REPEVVVVTDPRADHQALKEASEVGIPIVALCD 139 (196)
T ss_pred CCCCEEEEECCccccHHHHHHHHcCCCEEEEee
Confidence 4699888 564 66678888999999999944
No 316
>TIGR00162 conserved hypothetical protein TIGR00162. This ortholog set includes MJ1210 from Methanococcus jannaschii and AF0525 from Archaeoglobus fulgidus, but not MJ0106 or AF1251.
Probab=22.96 E-value=2.7e+02 Score=28.84 Aligned_cols=59 Identities=12% Similarity=0.181 Sum_probs=38.9
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEEe--CCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhcc
Q 001947 614 GTILVLMTELGVRFEDSISMLVSS--AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENH 682 (992)
Q Consensus 614 ~~i~~~~~~~g~~~~~g~~i~i~s--~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~ 682 (992)
+++...+.+.|++ ++.+..+. .+|. .-...+++.+++.++|++++..+|.+-|.++|..
T Consensus 100 glLl~~a~~~gi~---ai~L~~e~p~y~pD-------P~AA~alL~~L~kllgl~vd~~~L~e~Ae~ie~~ 160 (188)
T TIGR00162 100 GLLLGVSELEGIP---GACLMGETPGYMID-------PKAAKAVLEVLCKMLSLEVSVEALEERAKEMEKI 160 (188)
T ss_pred HHHHHHHHHCCCC---eEEEEEeCCCCCCC-------hHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Confidence 4444445556654 44444444 3444 3334456678999999999999999988887753
No 317
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=22.68 E-value=1.8e+02 Score=37.90 Aligned_cols=68 Identities=13% Similarity=0.095 Sum_probs=45.9
Q ss_pred HHHHhhcCEEEecC---Chh-HHHHHHHcCC---cEEEEe-CCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHH
Q 001947 274 PDFMAASDCMLGKI---GYG-TVSEALAYKL---PFVFVR-RDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLER 345 (992)
Q Consensus 274 p~lL~aaDlvIt~~---G~~-Tv~Eal~~Gv---P~V~iP-~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ 345 (992)
..+|+.||+++-.+ |+| +..|+++|+. .++++. ..+. +..| ...++.+++.+. +.+.++|.+
T Consensus 454 ~AlY~~ADV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGa------a~~L--~~~AllVNP~D~--~~vA~AI~~ 523 (934)
T PLN03064 454 CALYAVTDVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGA------AQSL--GAGAILVNPWNI--TEVAASIAQ 523 (934)
T ss_pred HHHHHhCCEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCch------HHHh--CCceEEECCCCH--HHHHHHHHH
Confidence 47889999999755 888 5669999965 233333 2222 2223 125788888774 788999999
Q ss_pred HhhCCC
Q 001947 346 AISLKP 351 (992)
Q Consensus 346 ll~~~~ 351 (992)
+|+.+.
T Consensus 524 AL~M~~ 529 (934)
T PLN03064 524 ALNMPE 529 (934)
T ss_pred HHhCCH
Confidence 987553
No 318
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=22.62 E-value=1.2e+02 Score=27.83 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=30.6
Q ss_pred HhCCCCCCcEEEEEcCCCCCh----------hhHHHhhCCCCcEEEEe-CCCCC-C---CCCCeE
Q 001947 216 ELGIEDDVKLLILNFGGQPAG----------WKLKEEYLPSGWKCLVC-GASDS-Q---LPPNFI 265 (992)
Q Consensus 216 ~l~~~~d~~~Vlvs~Gg~~~~----------~~ll~~l~~~~~~~Vv~-G~~~~-~---l~~nv~ 265 (992)
|+-.++++|.|++|+|+.... ..+++++...+..+|++ +.... . +|+||+
T Consensus 33 Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP~nVR 97 (97)
T PF06722_consen 33 WLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGELPDNVR 97 (97)
T ss_dssp GGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-TTTEE
T ss_pred ccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCCCCCC
Confidence 444557899999999976542 13444566667766654 33222 1 788875
No 319
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=22.42 E-value=1e+02 Score=32.41 Aligned_cols=30 Identities=33% Similarity=0.498 Sum_probs=23.9
Q ss_pred CCCcEEE-ECC--CchHHHHHHHcCCcEEEEec
Q 001947 117 IKADLVV-SDV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 117 ~kPDlVV-sD~--~~~a~~aA~~~gIP~v~is~ 146 (992)
..||+|| .|. ...+..=|..++||+|++.|
T Consensus 113 ~~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivD 145 (204)
T PRK04020 113 IEPDVVVVTDPRGDAQAVKEAIEVGIPVVALCD 145 (204)
T ss_pred CCCCEEEEECCcccHHHHHHHHHhCCCEEEEEe
Confidence 3899988 554 56677788999999999944
No 320
>PF11071 DUF2872: Protein of unknown function (DUF2872); InterPro: IPR019884 This entry represents a family of uncharacterised proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=21.94 E-value=1.1e+02 Score=29.58 Aligned_cols=34 Identities=15% Similarity=0.398 Sum_probs=27.4
Q ss_pred HHHhhcCEEEecCC-----hhHHHH---HHHcCCcEEEEeCC
Q 001947 275 DFMAASDCMLGKIG-----YGTVSE---ALAYKLPFVFVRRD 308 (992)
Q Consensus 275 ~lL~aaDlvIt~~G-----~~Tv~E---al~~GvP~V~iP~~ 308 (992)
.+|..||+||.+=| ||+-+. |+++|+|+|++..+
T Consensus 68 ~li~~aDvVVvrFGekYKQWNaAfDAg~a~AlgKplI~lh~~ 109 (141)
T PF11071_consen 68 TLIEKADVVVVRFGEKYKQWNAAFDAGYAAALGKPLITLHPE 109 (141)
T ss_pred HHHhhCCEEEEEechHHHHHHHHhhHHHHHHcCCCeEEecch
Confidence 67889999998876 677665 57899999999643
No 321
>PF02606 LpxK: Tetraacyldisaccharide-1-P 4'-kinase; InterPro: IPR003758 Tetraacyldisaccharide 4'-kinase phosphorylates the 4'-position of a tetraacyldisaccharide 1-phosphate precursor (DS-1-P) of lipid A, but the enzyme has not yet been purified because of instability []. This enzyme is involved in the synthesis of lipid A portion of the bacterial lipopolysaccharide layer (LPS).; GO: 0005524 ATP binding, 0009029 tetraacyldisaccharide 4'-kinase activity, 0009245 lipid A biosynthetic process
Probab=21.56 E-value=3e+02 Score=31.26 Aligned_cols=31 Identities=23% Similarity=0.257 Sum_probs=26.6
Q ss_pred cCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 23 TGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 23 ~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
+-.|.|=.--.+.|++.|+++|+.|.+++.+
T Consensus 44 tvGGTGKTP~v~~L~~~L~~~G~~~~IlSRG 74 (326)
T PF02606_consen 44 TVGGTGKTPLVIWLARLLQARGYRPAILSRG 74 (326)
T ss_pred ccCCCCchHHHHHHHHHHHhcCCceEEEcCC
Confidence 4456788888889999999999999999765
No 322
>TIGR01369 CPSaseII_lrg carbamoyl-phosphate synthase, large subunit. In several thermophilic species (Methanobacterium thermoautotrophicum, Methanococcus jannaschii, Aquifex aeolicus), the large subunit appears split, at different points, into two separate genes.
Probab=21.56 E-value=4.2e+02 Score=35.32 Aligned_cols=24 Identities=21% Similarity=0.206 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 31 TRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 31 ~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
.-|+.++++|+++||+|.++...+
T Consensus 575 ~~~v~~i~al~~~G~~vI~v~~np 598 (1050)
T TIGR01369 575 YCCVHAVLALRELGYETIMINYNP 598 (1050)
T ss_pred hHHHHHHHHHHhCCCEEEEEecCC
Confidence 457889999999999999886655
No 323
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=21.48 E-value=4.7e+02 Score=27.05 Aligned_cols=35 Identities=14% Similarity=0.233 Sum_probs=24.6
Q ss_pred HHHHHcCCCc--EEEECC--CchHHHHHHHcCCcEEEEe
Q 001947 111 VEWLNSIKAD--LVVSDV--VPVACRAAADAGIRSVCVT 145 (992)
Q Consensus 111 ~~~L~~~kPD--lVVsD~--~~~a~~aA~~~gIP~v~is 145 (992)
.+++++..++ ++|... -+.+..+|.+.++|.|.+.
T Consensus 50 ~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~~avLiN 88 (187)
T PF05728_consen 50 EQLIEELKPENVVLIGSSLGGFYATYLAERYGLPAVLIN 88 (187)
T ss_pred HHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCCCEEEEc
Confidence 4556777665 555544 5567778888999998873
No 324
>COG4088 Predicted nucleotide kinase [Nucleotide transport and metabolism]
Probab=21.25 E-value=88 Score=32.92 Aligned_cols=32 Identities=19% Similarity=0.088 Sum_probs=27.7
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEEeC
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~ 52 (992)
+..-+|.|-.+++.+||++|++++|+|...+.
T Consensus 6 lTGyPgsGKTtfakeLak~L~~~i~~vi~l~k 37 (261)
T COG4088 6 LTGYPGSGKTTFAKELAKELRQEIWRVIHLEK 37 (261)
T ss_pred EecCCCCCchHHHHHHHHHHHHhhhhccccch
Confidence 46678899999999999999999999876644
No 325
>PRK05920 aromatic acid decarboxylase; Validated
Probab=21.22 E-value=1.4e+02 Score=31.36 Aligned_cols=35 Identities=26% Similarity=0.320 Sum_probs=26.9
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
+|++.++ |......+..+.+.|++.|++|+++...
T Consensus 5 rIllgIT--Gsiaa~ka~~lvr~L~~~g~~V~vi~T~ 39 (204)
T PRK05920 5 RIVLAIT--GASGAIYGVRLLECLLAADYEVHLVISK 39 (204)
T ss_pred EEEEEEe--CHHHHHHHHHHHHHHHHCCCEEEEEECh
Confidence 3444665 4566789999999999999999877554
No 326
>cd01980 Chlide_reductase_Y Chlide_reductase_Y : Y subunit of chlorophyllide (chlide) reductase (BchY). Chlide reductase participates in photosynthetic pigment synthesis playing a role in the conversion of chlorophylls(Chl) into bacteriochlorophylls (BChl). Chlide reductase catalyzes the reduction of the B-ring of the tetrapyrolle. Chlide reductase is a three subunit enzyme (subunits are designated BchX, BchY and BchZ). The similarity between these three subunits and the subunits for nitrogenase suggests that BchX serves as an electron donor for the BchY-BchY catalytic subunits.
Probab=21.09 E-value=1.2e+02 Score=35.49 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=27.3
Q ss_pred HHHHHcCCCcEEEECCCchHHHHHHHcCCcEEEEec
Q 001947 111 VEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 111 ~~~L~~~kPDlVVsD~~~~a~~aA~~~gIP~v~is~ 146 (992)
.+.+++.+||++|+.. -+..+|+++|||.+.+.+
T Consensus 343 ~~~~~~~~pDl~Ig~s--~~~~~a~~~giP~~r~~~ 376 (416)
T cd01980 343 IAAVEEYRPDLAIGTT--PLVQYAKEKGIPALYYTN 376 (416)
T ss_pred HHHHhhcCCCEEEeCC--hhhHHHHHhCCCEEEecC
Confidence 4556789999999883 366689999999998754
No 327
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=20.79 E-value=6.9e+02 Score=25.94 Aligned_cols=35 Identities=20% Similarity=0.358 Sum_probs=28.5
Q ss_pred EeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 20 YYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 20 ~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
.++-..|.|=.+-+.-||..++.+|..|.++|...
T Consensus 5 ~lvGptGvGKTTt~aKLAa~~~~~~~~v~lis~D~ 39 (196)
T PF00448_consen 5 ALVGPTGVGKTTTIAKLAARLKLKGKKVALISADT 39 (196)
T ss_dssp EEEESTTSSHHHHHHHHHHHHHHTT--EEEEEEST
T ss_pred EEECCCCCchHhHHHHHHHHHhhccccceeecCCC
Confidence 34677899999999999999999999999998753
No 328
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=20.78 E-value=3.8e+02 Score=26.38 Aligned_cols=65 Identities=14% Similarity=0.050 Sum_probs=39.2
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCCCCCCCeEEcCCCCCHHHHHhhcCEEEecCCh
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQLPPNFIKLPKDAYTPDFMAASDCMLGKIGY 289 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~~l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~ 289 (992)
++.+.++++-..+.|++-..|...+..+...|...+..+.++... +.++.+.++.||++|+..|.
T Consensus 17 ~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~-------------t~~l~~~v~~ADIVvsAtg~ 81 (140)
T cd05212 17 ELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWK-------------TIQLQSKVHDADVVVVGSPK 81 (140)
T ss_pred HHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCC-------------CcCHHHHHhhCCEEEEecCC
Confidence 455667776555556565444444444544454455555555321 13567889999999998774
No 329
>TIGR01917 gly_red_sel_B glycine reductase, selenoprotein B. Glycine reductase is a complex with two selenoprotein subunits, A and B. This model represents the glycine reductase selenoprotein B. Closely related to it, but excluded from this model, are selenoprotein B subunits of betaine reductase and sarcosine reductase. All contain selenocysteine incorporated during translation at a specific UGA codon.
Probab=20.75 E-value=1.9e+02 Score=33.65 Aligned_cols=40 Identities=10% Similarity=0.206 Sum_probs=27.0
Q ss_pred HhHHHHHHHHHcCCCcEEEECCCc--------hHHH---HHHHcCCcEEEE
Q 001947 105 SILKDEVEWLNSIKADLVVSDVVP--------VACR---AAADAGIRSVCV 144 (992)
Q Consensus 105 ~~l~~~~~~L~~~kPDlVVsD~~~--------~a~~---aA~~~gIP~v~i 144 (992)
....+..+++++.+||++|.-..| ++.+ +...++||+++-
T Consensus 63 ea~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vta 113 (431)
T TIGR01917 63 EAKAKVLEMIKGANPDIFIAGPAFNAGRYGMAAGAITKAVQDELGIKAFTA 113 (431)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 344566788999999999975421 2222 235689999874
No 330
>TIGR01918 various_sel_PB selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family. This model represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. This model is built in fragment mode to assist in recognizing fragmentary translations. All members are expected to contain an internal TGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon.
Probab=20.64 E-value=2e+02 Score=33.62 Aligned_cols=39 Identities=10% Similarity=0.118 Sum_probs=26.4
Q ss_pred hHHHHHHHHHcCCCcEEEECCCc--------hHHH---HHHHcCCcEEEE
Q 001947 106 ILKDEVEWLNSIKADLVVSDVVP--------VACR---AAADAGIRSVCV 144 (992)
Q Consensus 106 ~l~~~~~~L~~~kPDlVVsD~~~--------~a~~---aA~~~gIP~v~i 144 (992)
...+..+++++.+||++|.-..| ++.+ +...++||+++-
T Consensus 64 a~~~i~~mv~k~~pDv~iaGPaFNagrYG~acg~va~aV~e~~~IP~vt~ 113 (431)
T TIGR01918 64 AVARVLEMLKDKEPDIFIAGPAFNAGRYGVACGEICKVVQDKLNVPAVTS 113 (431)
T ss_pred HHHHHHHHHHhcCCCEEEEcCccCCccHHHHHHHHHHHHHHhhCCCeEEE
Confidence 34556788899999999975421 2222 235689999874
No 331
>PF01993 MTD: methylene-5,6,7,8-tetrahydromethanopterin dehydrogenase; InterPro: IPR002844 This archaeal enzyme family is involved in formation of methane from carbon dioxide 1.5.99.9 from EC. The enzyme requires coenzyme F420 [].; GO: 0008901 ferredoxin hydrogenase activity, 0015948 methanogenesis, 0055114 oxidation-reduction process; PDB: 1U6I_D 3IQF_G 1QV9_C 3IQE_F 1U6J_G 3IQZ_D 1U6K_B.
Probab=20.40 E-value=1.3e+02 Score=32.15 Aligned_cols=36 Identities=17% Similarity=0.287 Sum_probs=21.8
Q ss_pred HHHHHcCCCcEEEECC---CchHHHHHHH----cCCcEEEEec
Q 001947 111 VEWLNSIKADLVVSDV---VPVACRAAAD----AGIRSVCVTN 146 (992)
Q Consensus 111 ~~~L~~~kPDlVVsD~---~~~a~~aA~~----~gIP~v~is~ 146 (992)
.+.+++++||++|.-. ...+...|+. .|+|+|.+++
T Consensus 52 ~~~~~~~~pdf~I~isPN~~~PGP~~ARE~l~~~~iP~IvI~D 94 (276)
T PF01993_consen 52 TKMLKEWDPDFVIVISPNAAAPGPTKAREMLSAKGIPCIVISD 94 (276)
T ss_dssp HHHHHHH--SEEEEE-S-TTSHHHHHHHHHHHHSSS-EEEEEE
T ss_pred HHHHHhhCCCEEEEECCCCCCCCcHHHHHHHHhCCCCEEEEcC
Confidence 4556899999999543 3345555543 5999999977
Done!