Query 001947
Match_columns 992
No_of_seqs 417 out of 3294
Neff 7.8
Searched_HMMs 13730
Date Mon Mar 25 05:50:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001947.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/001947hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1piea1 d.14.1.5 (A:9-213) Gal 100.0 2.5E-38 1.9E-42 328.8 18.6 198 481-720 5-202 (205)
2 d1wuua1 d.14.1.5 (A:2-216) Gal 100.0 1.8E-35 1.3E-39 309.8 20.4 203 478-721 11-213 (215)
3 d1piea2 d.58.26.7 (A:214-396) 100.0 1.4E-35 1E-39 297.2 13.1 181 723-976 1-183 (183)
4 d1s4ea1 d.14.1.5 (A:5-180) Gal 100.0 4.7E-35 3.5E-39 296.8 15.6 175 499-722 2-176 (176)
5 d1s4ea2 d.58.26.7 (A:181-351) 100.0 5.1E-34 3.7E-38 283.0 9.9 169 723-974 1-171 (171)
6 d1wuua2 d.58.26.7 (A:217-392) 100.0 5.9E-32 4.3E-36 270.8 9.5 172 723-976 1-174 (176)
7 d1kkha1 d.14.1.5 (A:1-180) Mev 100.0 1.6E-28 1.2E-32 249.2 15.2 171 495-709 4-174 (180)
8 d1rrva_ c.87.1.5 (A:) TDP-vanc 99.9 5.1E-26 3.7E-30 257.6 28.2 344 16-371 1-399 (401)
9 d1f0ka_ c.87.1.2 (A:) Peptidog 99.9 4.9E-25 3.5E-29 245.4 23.2 319 17-372 2-349 (351)
10 d1kvka1 d.14.1.5 (A:1-225) Mev 99.9 7.4E-26 5.4E-30 237.8 15.3 181 495-707 4-216 (225)
11 d1pn3a_ c.87.1.5 (A:) TDP-epi- 99.9 1.3E-23 9.4E-28 236.7 28.5 341 16-372 1-388 (391)
12 d1iira_ c.87.1.5 (A:) UDP-gluc 99.9 6.9E-23 5E-27 230.8 26.9 157 211-372 228-399 (401)
13 d2c1xa1 c.87.1.10 (A:7-456) UD 99.9 2.9E-22 2.1E-26 230.6 26.1 137 211-350 253-407 (450)
14 d1k47a1 d.14.1.5 (A:1-194) Pho 99.9 3.4E-23 2.5E-27 212.2 14.2 154 497-701 2-159 (194)
15 d2acva1 c.87.1.10 (A:3-463) Tr 99.9 4.4E-20 3.2E-24 212.0 28.3 326 15-351 7-425 (461)
16 d2pq6a1 c.87.1.10 (A:8-480) (I 99.8 1.4E-19 1E-23 208.3 28.1 134 213-350 278-433 (473)
17 d2vcha1 c.87.1.10 (A:6-476) Hy 99.8 2.7E-18 1.9E-22 197.5 31.5 137 211-350 251-425 (471)
18 d1kvka2 d.58.26.3 (A:226-394) 99.8 9.8E-20 7.1E-24 181.1 12.1 114 846-976 42-155 (169)
19 d1h72c1 d.14.1.5 (C:5-167) Hom 99.6 5.3E-15 3.9E-19 145.8 15.5 141 497-701 3-146 (163)
20 d1kkha2 d.58.26.3 (A:181-317) 99.5 3.3E-15 2.4E-19 141.8 6.2 89 848-955 39-127 (137)
21 d1k47a2 d.58.26.4 (A:195-329) 99.4 1.3E-13 9.4E-18 131.3 8.0 87 857-964 42-130 (135)
22 d2iw1a1 c.87.1.8 (A:2-371) Lip 98.8 3.1E-07 2.2E-11 99.6 23.7 134 209-351 181-338 (370)
23 d2bisa1 c.87.1.8 (A:1-437) Gly 98.8 3.1E-07 2.3E-11 102.7 24.4 128 212-350 239-394 (437)
24 d1rzua_ c.87.1.8 (A:) Glycogen 98.5 9.9E-08 7.2E-12 109.2 10.7 136 211-348 278-439 (477)
25 d1ueka1 d.14.1.5 (A:1-148) 4-( 98.2 2.6E-06 1.9E-10 80.6 10.9 77 609-700 57-133 (148)
26 d1oj4a1 d.14.1.5 (A:1-163) 4-( 98.1 7.4E-06 5.4E-10 78.9 12.4 63 629-701 88-150 (163)
27 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 98.1 4.8E-05 3.5E-09 83.6 19.4 318 14-372 1-367 (377)
28 d1h72c2 d.58.26.1 (C:168-300) 97.8 2E-05 1.4E-09 73.2 7.3 103 847-976 29-133 (133)
29 d1v4va_ c.87.1.3 (A:) UDP-N-ac 97.7 0.00031 2.3E-08 76.8 18.0 142 221-372 193-363 (373)
30 d1f6da_ c.87.1.3 (A:) UDP-N-ac 97.4 0.00086 6.3E-08 73.2 15.5 312 16-369 1-371 (376)
31 d2bfwa1 c.87.1.8 (A:218-413) G 97.3 0.0007 5.1E-08 66.5 12.6 129 210-349 20-176 (196)
32 d2f9fa1 c.87.1.8 (A:2-167) Fir 97.1 0.00043 3.1E-08 66.2 8.4 82 261-351 66-153 (166)
33 d1fi4a1 d.14.1.5 (A:3-190) Mev 97.1 0.00043 3.1E-08 67.3 8.0 62 630-701 101-162 (188)
34 d1pswa_ c.87.1.7 (A:) ADP-hept 96.0 0.036 2.6E-06 58.5 15.0 94 212-306 169-287 (348)
35 d1ueka2 d.58.26.5 (A:149-268) 91.8 0.036 2.6E-06 49.4 2.8 37 894-943 62-98 (120)
36 d1y4ia1 c.67.1.3 (A:2-398) Met 89.0 0.03 2.2E-06 60.6 -0.6 49 400-452 341-391 (397)
37 d2ctza1 c.67.1.3 (A:1-421) O-a 88.3 0.052 3.8E-06 59.1 0.7 48 400-451 369-418 (421)
38 d1uqta_ c.87.1.6 (A:) Trehalos 88.3 0.27 2E-05 54.0 6.8 76 264-350 333-419 (456)
39 d1e5ea_ c.67.1.3 (A:) Methioni 87.8 0.062 4.5E-06 58.1 1.0 48 400-451 338-387 (394)
40 d1pffa_ c.67.1.3 (A:) Methioni 87.2 0.044 3.2E-06 57.9 -0.7 48 400-451 276-325 (331)
41 d1ibja_ c.67.1.3 (A:) Cystathi 86.9 0.044 3.2E-06 59.0 -1.0 48 400-451 324-373 (380)
42 d1gc0a_ c.67.1.3 (A:) Methioni 84.6 0.079 5.8E-06 57.1 -0.3 48 400-451 337-386 (392)
43 d1cs1a_ c.67.1.3 (A:) Cystathi 84.5 0.066 4.8E-06 57.6 -1.1 48 400-451 327-376 (384)
44 d1qgna_ c.67.1.3 (A:) Cystathi 81.1 0.047 3.4E-06 59.1 -4.1 48 400-451 344-393 (398)
45 d1n8pa_ c.67.1.3 (A:) Cystathi 80.3 0.11 7.7E-06 56.1 -1.5 48 400-451 337-386 (393)
46 d1oj4a2 d.58.26.5 (A:164-283) 77.0 0.34 2.5E-05 42.8 1.2 34 895-943 57-90 (120)
47 d1cl1a_ c.67.1.3 (A:) Cystathi 75.0 0.58 4.2E-05 50.0 2.6 46 400-451 338-385 (391)
48 d1j9ja_ c.106.1.1 (A:) SurE ho 63.4 12 0.00086 36.5 9.5 30 22-53 6-35 (247)
49 d1jx7a_ c.114.1.1 (A:) Hypothe 48.9 8.4 0.00061 32.8 4.8 39 13-51 1-41 (117)
50 d1a9xa4 c.30.1.1 (A:556-676) C 47.2 18 0.0013 31.1 6.5 28 31-58 25-52 (121)
51 d2hy5b1 c.114.1.1 (B:205-336) 44.9 10 0.00073 33.2 4.7 38 13-50 1-38 (132)
52 d1byia_ c.37.1.10 (A:) Dethiob 44.5 9.7 0.0007 35.6 5.0 31 21-51 7-37 (224)
53 d1s2da_ c.23.14.1 (A:) Purine 40.3 13 0.00092 34.0 4.8 33 275-307 77-117 (167)
54 d2d1pb1 c.114.1.1 (B:1-119) tR 40.1 16 0.0012 31.0 5.2 39 13-51 1-39 (119)
55 d2f62a1 c.23.14.1 (A:9-160) Nu 38.8 13 0.00097 33.3 4.6 33 275-307 55-98 (152)
56 d1li5a2 c.26.1.1 (A:1-315) Cys 37.2 13 0.00094 37.4 4.8 43 10-54 17-68 (315)
57 d1f8ya_ c.23.14.1 (A:) Nucleos 36.9 14 0.001 33.2 4.5 33 275-307 73-113 (156)
58 d2hy5a1 c.114.1.1 (A:1-130) Su 33.5 23 0.0017 30.6 5.2 25 26-50 13-38 (130)
59 d1a9xa3 c.30.1.1 (A:1-127) Car 33.4 31 0.0023 29.7 5.9 31 29-59 26-56 (127)
60 d1rcua_ c.129.1.1 (A:) Hypothe 33.2 15 0.0011 33.7 3.9 35 275-309 92-130 (170)
61 d1luaa1 c.2.1.7 (A:98-288) Met 32.7 15 0.0011 33.9 4.1 75 215-289 15-102 (191)
62 d1ihua1 c.37.1.10 (A:1-296) Ar 31.1 28 0.002 33.9 6.1 44 10-55 4-47 (296)
63 d1u6ka1 c.127.1.1 (A:2-283) F4 30.2 30 0.0022 32.9 5.5 37 110-146 55-98 (282)
64 d2d1pa1 c.114.1.1 (A:1-128) tR 29.9 29 0.0021 29.9 5.2 34 17-50 2-38 (128)
65 d1g5qa_ c.34.1.1 (A:) Epidermi 29.5 1.1E+02 0.0079 27.6 9.5 102 225-327 5-140 (174)
66 d1j6ua1 c.5.1.1 (A:0-88) UDP-N 29.4 18 0.0013 29.2 3.4 25 118-142 60-88 (89)
67 d2uubb1 c.23.15.1 (B:7-240) Ri 29.3 46 0.0033 31.8 7.0 29 118-146 152-183 (234)
68 d1xhfa1 c.23.1.1 (A:2-122) Aer 26.9 42 0.003 28.2 5.7 40 109-148 37-83 (121)
69 d2pv7a2 c.2.1.6 (A:92-243) Pre 26.5 24 0.0017 31.0 4.1 37 10-53 6-42 (152)
70 d1p3da1 c.5.1.1 (A:11-106) UDP 25.1 23 0.0017 28.9 3.3 18 33-50 21-38 (96)
71 d2jfga1 c.5.1.1 (A:1-93) UDP-N 24.8 29 0.0021 27.8 4.0 78 222-303 5-92 (93)
72 d1ys7a2 c.23.1.1 (A:7-127) Tra 24.3 46 0.0034 27.9 5.5 40 109-148 36-83 (121)
73 d1zesa1 c.23.1.1 (A:3-123) Pho 23.4 40 0.0029 28.3 4.8 41 108-148 34-84 (121)
74 d2a9pa1 c.23.1.1 (A:2-118) DNA 23.1 45 0.0033 27.7 5.1 40 109-148 35-81 (117)
75 d1o5ia_ c.2.1.2 (A:) beta-keto 22.6 31 0.0023 32.7 4.4 66 224-289 5-76 (234)
76 d1mb3a_ c.23.1.1 (A:) Cell div 22.4 35 0.0025 28.7 4.2 40 109-148 36-85 (123)
77 d1ny5a1 c.23.1.1 (A:1-137) Tra 22.3 47 0.0034 28.5 5.2 41 108-148 34-82 (137)
78 d1ltqa1 c.108.1.9 (A:153-301) 21.5 2.1E+02 0.015 23.7 11.3 24 31-54 39-62 (149)
79 d1peya_ c.23.1.1 (A:) Sporulat 21.5 44 0.0032 27.9 4.7 40 109-148 36-83 (119)
80 d2hmva1 c.2.1.9 (A:7-140) Ktn 20.9 42 0.003 28.4 4.5 55 277-335 62-122 (134)
81 d1ccwa_ c.23.6.1 (A:) Glutamat 20.6 47 0.0034 28.8 4.7 39 13-52 1-39 (137)
82 d1kgsa2 c.23.1.1 (A:2-123) Pho 20.3 63 0.0046 26.9 5.5 40 109-148 36-83 (122)
83 d1krwa_ c.23.1.1 (A:) NTRC rec 20.2 41 0.003 28.3 4.2 38 111-148 40-85 (123)
84 d1b74a1 c.78.2.1 (A:1-105) Glu 20.2 2E+02 0.014 23.5 8.4 37 108-144 52-92 (105)
No 1
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=2.5e-38 Score=328.75 Aligned_cols=198 Identities=25% Similarity=0.442 Sum_probs=167.3
Q ss_pred HHHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCe
Q 001947 481 RERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPV 560 (992)
Q Consensus 481 ~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 560 (992)
.....|.+.||..+++.+++|||||+|||||+||+||+||+|||++++++++++++|+++++++
T Consensus 5 ~~~~~f~~~f~~~~~~~~~~aPgRv~L~GeH~Dy~gg~vl~~AI~~~~~v~~~~~~d~~i~i~s---------------- 68 (205)
T d1piea1 5 ALTEKFAEVFGDTKEVEYFFSPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKKVKLYS---------------- 68 (205)
T ss_dssp HHHHHHHHHHSCCCSCEEEEEEEEEEEECCSCTTTTCEEEEEEEEEEEEEEEEECSSSEEEEEE----------------
T ss_pred HHHHHHHHHhCCCcceeEEEcceEEEEecCCeeECCCEeecccccceEEEEEecCCCCeeeeec----------------
Confidence 3456788999987877788999999999999999999999999999999999999997765543
Q ss_pred EEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCC
Q 001947 561 LQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVP 640 (992)
Q Consensus 561 i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP 640 (992)
.+. . +...++++..++ .......|.+|+++++..+ ++.+..+..||+|.|.|+||
T Consensus 69 -----~~~--~-~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~i~~l-~~~~~~~~~G~~i~i~s~iP 123 (205)
T d1piea1 69 -----ENF--P-KLGVIEFDLDEV----------------EKKDGELWSNYVKGMIVML-KGAGYEIDKGFELLIKGEIP 123 (205)
T ss_dssp -----TTC--G-GGCCEEEETTCT----------------TSCCTTCTHHHHHHHHHHH-HHTTCCCCSCEEEEEEECSC
T ss_pred -----CCC--C-ccceeecccccc----------------ccccccchhHHHHHHHHHH-HHhCCccccCeEEEEecCCc
Confidence 211 1 111234443332 1234578999999998864 56676655899999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecC
Q 001947 641 EGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEI 720 (992)
Q Consensus 641 ~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~ 720 (992)
.|+|||||||++||++.|++.+++.++++.+++++|+++|+.++|.|||+|||+++++||.|+++++||++.++ +.+|+
T Consensus 124 ~gsGLgSSAAl~va~~~al~~~~~~~~~~~~ia~~a~~~E~~~~g~~~G~~Dq~as~~g~~~~~~~~d~~~~~~-~~ip~ 202 (205)
T d1piea1 124 TASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKY-EMVPV 202 (205)
T ss_dssp TTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCCCCSHHHHHHHHCBTTEEEEEETTTCCE-EEEEC
T ss_pred cccccCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCcHHHHHHHHhcCCCeEEEEECCCCcE-EecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999876 66665
No 2
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=1.8e-35 Score=309.84 Aligned_cols=203 Identities=27% Similarity=0.385 Sum_probs=163.5
Q ss_pred HHHHHHHHHhccCCCCCceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCC
Q 001947 478 RQMRERKAAAGLFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGP 557 (992)
Q Consensus 478 ~~~~~~~~~~~~f~~~~~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~ 557 (992)
...+.++.|.+.||.++ .++++|||||+|||||+||+||+||++||++++++++++++|+++++++
T Consensus 11 ~~~~~~~~F~~~fg~~p-~~i~~APGrv~L~GEH~dy~Gg~vl~~Ai~~~~~v~~~~~~d~~i~v~s------------- 76 (215)
T d1wuua1 11 LLAEARRAFREEFGAEP-ELAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLT------------- 76 (215)
T ss_dssp HHHHHHHHHHHHHSSCC-SEEEEEEEEEEEECTTCGGGTCEEEEEEEEEEEEEEEEEETTCEEEEEE-------------
T ss_pred HHHHHHHHHHHHhCCCC-CEEEEcceEEEEecCCeeeCCceEEeeeccCcEEEEEEecCCCEEEEEE-------------
Confidence 34557788999999755 4799999999999999999999999999999999999999998766543
Q ss_pred CCeEEEEecccccCCCCCceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEe
Q 001947 558 MPVLQIVSYGSELSNRGPTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSS 637 (992)
Q Consensus 558 ~~~i~i~s~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s 637 (992)
..... .....+.+++..... ........|.+|+.+.+..+ .+... .|+++.|.|
T Consensus 77 --------~~~~~-~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~---~~~~~-~g~~i~i~S 130 (215)
T d1wuua1 77 --------TSEGA-DEPQRLQFPLPTAQR-------------SLEPGTPRWANYVKGVIQYY---PAAPL-PGFSAVVVS 130 (215)
T ss_dssp --------CCSSS-CSCSEEEEECCCSSC-------------CCCCCSSGGGHHHHHHHHHC---SSSCC-CEEEEEEEE
T ss_pred --------ccCCC-CcceEEeeccccccc-------------ccccccchhhhhhhhhHhhh---ccCCC-CCeEEEEec
Confidence 21110 000111222111000 01234568999988766532 22333 799999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceee
Q 001947 638 AVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGV 717 (992)
Q Consensus 638 ~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~ 717 (992)
+||+|+|||||||++||++.|++.+++.++++++++++|+++|+.++|.|||+|||++++||+.++++++||++.++ +.
T Consensus 131 ~iP~gaGLgSSAA~~val~~al~~~~~~~~~~~~la~~a~~~E~~~~G~~~G~mDq~as~~g~~~~~~~id~~~~~~-~~ 209 (215)
T d1wuua1 131 SVPLGGGLSSSASLEVATYTFLQQLCPDSGTIAARAQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLET-SL 209 (215)
T ss_dssp CSCTTSSSCHHHHHHHHHHHHHHHHSCCCSCHHHHHHHHHHHHHHHTCCCCCSHHHHHHHHCCTTEEEEEETTTCCE-EE
T ss_pred CcccCcccccchHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhcCCCCcHHHHHHHHhCCCCeEEEEECCCCcE-Ee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887 78
Q ss_pred ecCC
Q 001947 718 VEIP 721 (992)
Q Consensus 718 v~~p 721 (992)
+|+|
T Consensus 210 vp~~ 213 (215)
T d1wuua1 210 VPLS 213 (215)
T ss_dssp EECC
T ss_pred ecCC
Confidence 8886
No 3
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]}
Probab=100.00 E-value=1.4e-35 Score=297.16 Aligned_cols=181 Identities=22% Similarity=0.289 Sum_probs=153.3
Q ss_pred CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChH
Q 001947 723 HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPH 802 (992)
Q Consensus 723 ~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~ 802 (992)
+++|+|+|||++|++.+++||.||.+|.-+. +.++.....+.||+++.+
T Consensus 1 dy~lvi~dS~v~h~L~~s~Yn~R~~ec~~a~-------------------------------~~v~~~~~~~~L~~v~~~ 49 (183)
T d1piea2 1 DYDIVIMNTNKPRALTESKYNERFAETREAL-------------------------------KRMQTRLDIQSLGELSNE 49 (183)
T ss_dssp TEEEEEEECCCCCCTTCHHHHHHHHHHHHHH-------------------------------HHHHHHCCCSSGGGCCHH
T ss_pred CeEEEEEeCCCCcCcCcchhHHHHHHHHHHH-------------------------------HHHHHhcCcchHhhhcHH
Confidence 5789999999999999999999999984333 223333345679999998
Q ss_pred HHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHH
Q 001947 803 RFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ 882 (992)
Q Consensus 803 ~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~ 882 (992)
++.+.. ..+.+. .+++|++|+++||.||.+++++|+++ |++.||+||++
T Consensus 50 ~l~~~~-~~l~d~--------------------------~~~rRa~Hvv~En~Rv~~a~~al~~~----d~~~~G~lm~~ 98 (183)
T d1piea2 50 EFDANT-DLIGDE--------------------------TLIKRARHAVYENNRTKIAQKAFVAG----NLTKFGELLNA 98 (183)
T ss_dssp HHHHTG-GGTCCH--------------------------HHHHHHHHHHHHHHHHHHHHHHHHHT----CHHHHHHHHHH
T ss_pred HHHHHH-hhcCCH--------------------------HHHHHHHHHHHHHHHHHHhhhhhhhc----cHHHHHHHHHH
Confidence 887642 233210 25679999999999999999999997 99999999999
Q ss_pred hhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCC
Q 001947 883 CHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGY 961 (992)
Q Consensus 883 sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~ 961 (992)
||.||++ +++|||++|.||+++++ ..|++||||||||||||+++|.+.+. .++++++|.+.|++++|.
T Consensus 99 Sh~sl~~~~evs~~elD~Lv~~a~~----------~~G~~GaRmtGgGfGGcvialv~~~~-~~~~~~~i~~~y~~~~g~ 167 (183)
T d1piea2 99 SHASLKDDYEVTGLELDTLAETAQK----------QAGVLGARMTGAGFGGCAIALVAHDN-VSAFRKAVGQVYEEVVGY 167 (183)
T ss_dssp HHHHHHHTSCCCCHHHHHHHHHHHH----------STTEEEEEECSSCSSSEEEEEEEGGG-HHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhcCCCchHHHHHHHHHH----------hCCCeEeeccccCCCceEEEEecHHH-HHHHHHHHHHHHHHhhCC
Confidence 9999998 79999999999999987 26999999999999999998887544 479999999999999999
Q ss_pred CCeEEee-cCCCCcee
Q 001947 962 LPLIIEG-SSPGAGKF 976 (992)
Q Consensus 962 ~~~~~~~-~~~Ga~~~ 976 (992)
+|.+|++ +++||+++
T Consensus 168 ~~~~~~~~~~~Ga~~i 183 (183)
T d1piea2 168 PASFYVAQIGSGSTKL 183 (183)
T ss_dssp CCEEEECCBCCCSBCC
T ss_pred CCcEEEEecCCCceeC
Confidence 9999998 79999864
No 4
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=4.7e-35 Score=296.83 Aligned_cols=175 Identities=28% Similarity=0.510 Sum_probs=142.4
Q ss_pred EEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCCcee
Q 001947 499 ARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGPTFD 578 (992)
Q Consensus 499 ~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~~~~ 578 (992)
|+|||||+|+|||+||+||+||+|||++++++.++++++.+++.. ++.. ..+
T Consensus 2 v~aPgRi~l~GeH~Dy~gg~vl~~AI~~~~~v~~~~~~~~~i~~~-------------------------~~~~---~~~ 53 (176)
T d1s4ea1 2 VKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYDKVQLYSE-------------------------HFNE---EKT 53 (176)
T ss_dssp EEEEEEEESSCCSCGGGTCEECEEEEEEEEEEC----CCBCCCBT-------------------------TTTC----C-
T ss_pred cccCEEEEEEccCeeeCCCEEEeEEeeeEEEEEEEcccceEEEec-------------------------cCCc---cee
Confidence 799999999999999999999999999999998887765432211 0100 111
Q ss_pred ccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHH
Q 001947 579 MDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSA 658 (992)
Q Consensus 579 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~a 658 (992)
+++.++ ....+|.+|+.+++..+ .+.+... .||+|.|.|+||+|+|||||||++||++.|
T Consensus 54 ~~~~~~------------------~~~~~~~~~~~~~~~~~-~~~~~~~-~g~~i~i~s~iP~gsGLgSSAAl~va~~~a 113 (176)
T d1s4ea1 54 FTLDNL------------------TKEGSWIDYVKGVLWVL-IQEGYKI-GGLKGKITGDLPLGAGLSSSASFEVGILEV 113 (176)
T ss_dssp --CC-C------------------CCCSSTHHHHHHHHHHH-HHTTCCC-CCBC-CEEESSCTTSSSCHHHHHHHHHHHH
T ss_pred eeeccc------------------cccccchhheehhhhhh-hhhcccC-CCeEEEEecCcccCccccchHHHHHHHHHH
Confidence 222221 23468999999988865 4566665 799999999999999999999999999999
Q ss_pred HHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEeecCccceeeecCCC
Q 001947 659 IAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVCQPAELLGVVEIPS 722 (992)
Q Consensus 659 l~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~~~~~~~~~v~~p~ 722 (992)
++++++.++++.+++++|+++|+.++|.|||+|||++++|||.++++++||++.++ +++++|+
T Consensus 114 l~~~~~~~~~~~~l~~~a~~~E~~~~g~~~G~~Dq~~~~~gg~~~~~~~d~~~~~~-~~i~~P~ 176 (176)
T d1s4ea1 114 LNQLYNLNIDPLKKALLAKKAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQY-EYIPFPK 176 (176)
T ss_dssp HHHHTTCCCCHHHHHHHHHHHHHHTSCCCCCSHHHHHHHHCCTTEEEEEETTTTEE-EEEECCT
T ss_pred HHHHhhccCCHHHHHHHHHHHHHHhcCCCcchHHHHHHHhcCCCEEEEEeCCCCCE-EecCCCC
Confidence 99999999999999999999999999999999999999999999999999999887 7899884
No 5
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=100.00 E-value=5.1e-34 Score=283.04 Aligned_cols=169 Identities=17% Similarity=0.265 Sum_probs=145.2
Q ss_pred CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChH
Q 001947 723 HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPH 802 (992)
Q Consensus 723 ~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~ 802 (992)
++.|||+|||++|++.+++||.||.+|.-+. +.| ..+.||+++++
T Consensus 1 d~~~vv~dsg~~h~L~~s~Yn~R~~ec~~a~-------------------------------~~l----g~~~l~~~~~~ 45 (171)
T d1s4ea2 1 DVSVLVFYTGVKRELASSEYAERKRIAEESL-------------------------------RIL----GKESSKEVTEK 45 (171)
T ss_dssp TEEEEEEEEEEECTTHHHHHHHHHHHHHHHH-------------------------------HHH----TCSCGGGCCHH
T ss_pred CeEEEEEeCCCCcCCCcchHHHHHHHHHHHH-------------------------------HHH----hhhhhhhhhHH
Confidence 5789999999999999999999999984221 111 13457888877
Q ss_pred HHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHH
Q 001947 803 RFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ 882 (992)
Q Consensus 803 ~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~ 882 (992)
++. .|++. .++|++|+++||.||.+++++|+++ |++.||+||++
T Consensus 46 ~l~-----~l~~~---------------------------~~~Ra~Hvv~En~Rv~~~~~al~~~----d~~~~G~lm~~ 89 (171)
T d1s4ea2 46 DLG-----KLPPL---------------------------HRKFFSYIVRENARVLEVRDALKEG----DIEKVGKILTT 89 (171)
T ss_dssp HHH-----TSCHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHH
T ss_pred HHh-----hcCHH---------------------------HHHHHHHHHHHHHHHHHHHHHhhcc----cHHHHHHHHHH
Confidence 763 24331 4679999999999999999999996 99999999999
Q ss_pred hhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCC
Q 001947 883 CHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGY 961 (992)
Q Consensus 883 sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~ 961 (992)
||.||++ +++|||++|.|++.+++ .|++||||||||||||+++|++.+. .++++++|.+.|++++|.
T Consensus 90 sh~sl~~~~evS~~eld~lv~~a~~-----------~Ga~GaRmtGgGfGG~viaLv~~~~-~~~~~~~i~~~y~~~~~~ 157 (171)
T d1s4ea2 90 AHWDLAENYRVSCEELDFFVKKAME-----------LGAYGARLTGAGFGGSAIALVDKDK-AKTIGDAILREYLAKFSW 157 (171)
T ss_dssp HHHHHHHTTCCCCHHHHHHHHHHHH-----------TTCSEEEECSSCSEEEEEEEEEGGG-HHHHHHHHHHHHHHHCCS
T ss_pred HHHHHHHhhccCCHHHHHHHHHHhh-----------cccCceeeecCCCCcEEEEEecHHH-HHHHHHHHHHHHHHhcCC
Confidence 9999998 79999999999999987 6999999999999999998876554 479999999999999999
Q ss_pred CCeEEee-cCCCCc
Q 001947 962 LPLIIEG-SSPGAG 974 (992)
Q Consensus 962 ~~~~~~~-~~~Ga~ 974 (992)
+|.+|++ +++||+
T Consensus 158 ~~~~~~~~p~~Gag 171 (171)
T d1s4ea2 158 KAKYFVVKPSDGVG 171 (171)
T ss_dssp CCEEEEECBCCCCC
T ss_pred CCCEEEEecCCCCC
Confidence 9999998 799985
No 6
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.97 E-value=5.9e-32 Score=270.84 Aligned_cols=172 Identities=20% Similarity=0.250 Sum_probs=137.1
Q ss_pred CeEEEEEeCCCccccCCCCCcchhhhhhcchhhhhhhccccCCccCCCCCCCCCCCcchhhhhHHHHhhhhHHHhcCChH
Q 001947 723 HIRFWGIDSGIRHSVGGADYGSVRAGAFMGRKMIKSTASGMLPQSLPSSNGLNNIEPEVDGVELLEAEASLDYLCNLSPH 802 (992)
Q Consensus 723 ~~~~vl~dsgi~~~~~~~~y~~rr~~~~~~~~~i~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~L~~~~~~ 802 (992)
.+++||+|||++|++.+++||.|+.+|.... +.| ..+.||+++++
T Consensus 1 ~l~lvl~ds~v~r~l~~~~Yn~R~~ec~~aa--------~~l---------------------------g~~~l~~~~~~ 45 (176)
T d1wuua2 1 KLAVLITNSNVRHSLASSEYPVRRRQCEEVA--------RAL---------------------------GKESLREVQLE 45 (176)
T ss_dssp SEEEEEEEEEEEC--CTTTHHHHHHHHHHHH--------HHT---------------------------TCSSTTSCCHH
T ss_pred CeEEEEEcCCCCcCcCccchHHHHHHHHHHH--------HHh---------------------------CccchhhccHH
Confidence 3689999999999999999999999984321 111 12357888877
Q ss_pred HHHHHHhhcCCccchhhhhhhhcCCCCCCceecCCCccccccccccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHH
Q 001947 803 RFEALYAKNIPESIVGEEFSKNYGDHNDPVTVIDPKRTYFVRAPVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQ 882 (992)
Q Consensus 803 ~~~~~~~~~lp~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~ 882 (992)
++... .+.+++. .++|++|+++||.||.+++++|+++ |++.||+||++
T Consensus 46 ~l~~~-~~~l~~~---------------------------~~~Ra~Hv~~E~~Rv~~~~~al~~~----d~~~lg~Lm~~ 93 (176)
T d1wuua2 46 ELEAA-RDLVSKE---------------------------GFRRARHVVGEIRRTAQAAAALRRG----DYRAFGRLMVE 93 (176)
T ss_dssp HHTTG-GGGSCHH---------------------------HHHHHHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHHH
T ss_pred HHHHH-HhhhccH---------------------------HHHHHHHHHHHHHhhHHHHHHhhcc----CHHHHHHHHHH
Confidence 76553 2334331 4579999999999999999999996 99999999999
Q ss_pred hhhhhhh-cCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCC
Q 001947 883 CHYSYSA-CGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGY 961 (992)
Q Consensus 883 sH~slr~-~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~ 961 (992)
||.||++ |+||||++|.||++|++ ..|++||||||||||||+++|.+.+. .+++++.+. ++||.
T Consensus 94 sh~sL~~~~~vS~peld~lv~~a~~----------~~G~lGaRltGaGfGGcviaLv~~~~-~~~~~~~~~----~~yg~ 158 (176)
T d1wuua2 94 SHRSLRDDYEVSCPELDQLVEAALA----------VPGVYGSRMTGGGFGGCTVTLLEASA-APHAMRHIQ----EHYGG 158 (176)
T ss_dssp HHHHHHHTSCCCCHHHHHHHHHHHT----------STTEEEEEECSSCSEEEEEEEEEGGG-HHHHHHHHH----HHCSS
T ss_pred HHHHHHHHHhccChhHHHHHHHHHh----------cCCCceeeeccCCCCcEEEEEechhh-HHHHHHHHH----HHhCC
Confidence 9999998 79999999999999986 25999999999999999998886544 255665554 55678
Q ss_pred CCeEEee-cCCCCcee
Q 001947 962 LPLIIEG-SSPGAGKF 976 (992)
Q Consensus 962 ~~~~~~~-~~~Ga~~~ 976 (992)
+|.+|.+ ++.||+++
T Consensus 159 ~~~~~~~~~~~Ga~~i 174 (176)
T d1wuua2 159 TATFYLSQAADGAKVL 174 (176)
T ss_dssp CCEEEEECCCCCSEEC
T ss_pred CCCEEEEecCCCceEc
Confidence 8999987 79999875
No 7
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.95 E-value=1.6e-28 Score=249.24 Aligned_cols=171 Identities=17% Similarity=0.219 Sum_probs=137.6
Q ss_pred ceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCC
Q 001947 495 EIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 574 (992)
Q Consensus 495 ~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 574 (992)
+.++++|||||+|+|||+||+|++||++|||+++++.+++++++++++. +.+. +
T Consensus 4 ~~~~~~aPgkv~L~GEh~~~~G~~~l~~aI~~~~~v~~~~~~~~~~~i~---------------------~~~~---~-- 57 (180)
T d1kkha1 4 SHMIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILN---------------------LNDL---N-- 57 (180)
T ss_dssp CCEEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECCSSEEEEE---------------------ETTT---T--
T ss_pred CeEEEEcCEEEEEEccCeEEcCCEEEEEEEeCEEEEEEEECCCCCccee---------------------eecc---c--
Confidence 4579999999999999999999999999999999999999988765432 2211 0
Q ss_pred CceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHH
Q 001947 575 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVA 654 (992)
Q Consensus 575 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va 654 (992)
..+.++++++... ......|..|+..++...++..+.+...||++.+.|+||.++|||||||++||
T Consensus 58 ~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~i~i~s~iP~g~GLGSSaa~~va 123 (180)
T d1kkha1 58 KSLGLNLNEIKNI--------------NPNNFGDFKYCLCAIKNTLDYLNIEPKTGFKINISSKIPISCGLGSSASITIG 123 (180)
T ss_dssp EEEEEETTTGGGC--------------CGGGSGGGHHHHHHHHHHHHHTTCCCCSCEEEEEEECSCSSSSSCHHHHHHHH
T ss_pred ceeeecchhcccc--------------CccchhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchhhcCccccchhHHH
Confidence 1122333332110 01124567788888887787777765579999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCcceEEEEee
Q 001947 655 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEANKLLAMVC 709 (992)
Q Consensus 655 ~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~~~~~~~~ 709 (992)
++.+|+.+++.++++++++++|+.+|+.++|.++| |||++++||| ++++++
T Consensus 124 ~~~al~~~~~~~l~~~~l~~la~~~E~~~~g~~sg-~D~~~~~~Gg---~i~~~~ 174 (180)
T d1kkha1 124 TIKAVSGFYNKELKDDEIAKLGYMVEKEIQGKASI-TDTSTITYKG---ILEIKN 174 (180)
T ss_dssp HHHHHHHTTTCCCCHHHHHHHHHHHHHHHSSSCCS-HHHHHHHHCS---EEEESS
T ss_pred HHHHHHHHhCcCCCHHHHHHHHHHHHHHhCCCCCH-HHHHHHHhCC---EEEEeC
Confidence 99999999999999999999999999999998766 8999999999 466654
No 8
>d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.94 E-value=5.1e-26 Score=257.56 Aligned_cols=344 Identities=11% Similarity=0.044 Sum_probs=204.1
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKY 95 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 95 (992)
|||++...| ..||++|+++||++|+++||+|+|++... +.+.+...++.+.+.+.+...................+
T Consensus 1 mrIl~~~~g-t~Ghv~P~l~lA~~L~~rGh~V~~~t~~~---~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (401)
T d1rrva_ 1 MRVLLSVCG-TRGDVEIGVALADRLKALGVQTRMCAPPA---AEERLAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRL 76 (401)
T ss_dssp CEEEEEEES-CHHHHHHHHHHHHHHHHTTCEEEEEECGG---GHHHHHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHH
T ss_pred CeEEEECCC-ChhHHHHHHHHHHHHHHCCCEEEEEEChh---hHHHHHHCCCeEEEcCCcHHhhhccccccccHHHHHHH
Confidence 567666554 46999999999999999999999998643 11111101112222211111111111111111122222
Q ss_pred HHHhhccHHHhHHHHHHHHHcCCCcEEEECC--CchHHHHHHHcCCcEEEEecCchh----------------------H
Q 001947 96 SETAVAPRKSILKDEVEWLNSIKADLVVSDV--VPVACRAAADAGIRSVCVTNFSWD----------------------F 151 (992)
Q Consensus 96 ~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~--~~~a~~aA~~~gIP~v~is~~~~~----------------------~ 151 (992)
... ......+...+.++..+||+++.|. ..++..+|+.+++|.+........ .
T Consensus 77 ~~~---~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (401)
T d1rrva_ 77 AAM---TVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGLPFFYSVPSPVYLASPHLPPAYDEPTTPGVTDIRV 153 (401)
T ss_dssp HHH---HHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSCCSSSCCCBCSCCCTTCCCHHH
T ss_pred HHH---HHHHHHHHHHHHHhcCCCeEEEEcCchhhHHHHHHHHhCCCcccccccchhhcccccccccccccccccchhhh
Confidence 221 1222334445667889999999986 445667889999998876332100 0
Q ss_pred HHHHHHhhhccchHHHHHHHHhhccc-----------cc-eeee-cCCCCCCCCCCceeecCccccc-CCCChHHHHHHh
Q 001947 152 IYAEYVMAAGHHHRSIVWQIAEDYSH-----------CE-FLIR-LPGYCPMPAFRDVIDVPLVVRR-LHKSRKEVRKEL 217 (992)
Q Consensus 152 ~~~~~~~~~~~~~~~i~~~l~~~y~~-----------~d-~ll~-~~~~~~~p~~~~v~~vp~~~~~-~~~~r~e~r~~l 217 (992)
.+...............+.....+.. .. ..+. .+.....+...++..+|+.... ....+.++.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l 233 (401)
T d1rrva_ 154 LWEERAARFADRYGPTLNRRRAEIGLPPVEDVFGYGHGERPLLAADPVLAPLQPDVDAVQTGAWLLSDERPLPPELEAFL 233 (401)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCHHHHTTCSSCEECSCTTTSCCCSSCCCEECCCCCCCCCCCCCHHHHHHH
T ss_pred hHHHHHHHHHhhhHHHHHHHHHHhCCcccchhhhhccccchhhcchhhhcccCCCCCeEEECCCcccccccCCHHHHHhh
Confidence 00000000000001111122221110 00 0110 1111112222345556554442 333445565655
Q ss_pred CCCCCCcEEEEEcCCCCCh--hhHHH----hhCCCCc-EEEEeCCCCCC---CCCCeEEcCCCCCHHHHHhhcCEEEecC
Q 001947 218 GIEDDVKLLILNFGGQPAG--WKLKE----EYLPSGW-KCLVCGASDSQ---LPPNFIKLPKDAYTPDFMAASDCMLGKI 287 (992)
Q Consensus 218 ~~~~d~~~Vlvs~Gg~~~~--~~ll~----~l~~~~~-~~Vv~G~~~~~---l~~nv~v~~f~~~~p~lL~aaDlvIt~~ 287 (992)
. .+.++|++++|+.... ..+.+ .+...+. .+++.+..... +++|+++.+|++ ..++|+++|+|||||
T Consensus 234 ~--~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~ll~~~~~~I~hg 310 (401)
T d1rrva_ 234 A--AGSPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDRDDCFAIDEVN-FQALFRRVAAVIHHG 310 (401)
T ss_dssp H--SSSCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCCTTEEEESSCC-HHHHGGGSSEEEECC
T ss_pred c--cCCCeEEEECCccccCCHHHHHHHHHHHHhhcCCeEEEeccccccccccCCCCEEEEeccC-cHHHhhhccEEEecC
Confidence 4 4567899999988763 12222 2322333 34444443322 789999998875 568999999999999
Q ss_pred ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC-------ccCCCCHH
Q 001947 288 GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC-------YEGGINGG 360 (992)
Q Consensus 288 G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~-------~~~~~~G~ 360 (992)
|+||++||+++|+|+|++| .+.||+.||+++++.|+|+.++..+++++.|.++|+++++++.+ .....+|+
T Consensus 311 G~~t~~Eal~~GvP~l~~P--~~~DQ~~na~~v~~~G~g~~l~~~~~~~~~L~~ai~~vl~~~~r~~a~~~~~~~~~~g~ 388 (401)
T d1rrva_ 311 SAGTEHVATRAGVPQLVIP--RNTDQPYFAGRVAALGIGVAHDGPTPTFESLSAALTTVLAPETRARAEAVAGMVLTDGA 388 (401)
T ss_dssp CHHHHHHHHHHTCCEEECC--CSBTHHHHHHHHHHHTSEEECSSSCCCHHHHHHHHHHHTSHHHHHHHHHHTTTCCCCHH
T ss_pred CchHHHHHHHhCCCEEEec--ccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCH
Confidence 9999999999999999999 56799999999999999999999999999999999999953211 01356899
Q ss_pred HHHHHHHHHHH
Q 001947 361 EVAAHILQETA 371 (992)
Q Consensus 361 ~~aA~~I~~~~ 371 (992)
.++|+.|++.+
T Consensus 389 ~~aa~~ie~~~ 399 (401)
T d1rrva_ 389 AAAADLVLAAV 399 (401)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 9
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=99.93 E-value=4.9e-25 Score=245.40 Aligned_cols=319 Identities=16% Similarity=0.024 Sum_probs=191.1
Q ss_pred EEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHHHHHH
Q 001947 17 VFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYS 96 (992)
Q Consensus 17 ~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 96 (992)
||++..+|.| ||++||++|+++|+++||+|+|++.... ...+.+....+.+.... ..++.. ...........
T Consensus 2 kili~~~GtG-GHv~~a~al~~~L~~~G~eV~~i~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~ 73 (351)
T d1f0ka_ 2 RLMVMAGGTG-GHVFPGLAVAHHLMAQGWQVRWLGTADR-MEADLVPKHGIEIDFIR-ISGLRG-----KGIKALIAAPL 73 (351)
T ss_dssp EEEEECCSSH-HHHHHHHHHHHHHHTTTCEEEEEECTTS-THHHHGGGGTCEEEECC-CCCCTT-----CCHHHHHTCHH
T ss_pred EEEEEcCCcH-HHHHHHHHHHHHHHhCCCEEEEEEeCCc-chhhcccccCCcEEEEE-CCCcCC-----CCHHHHHHHHH
Confidence 3444666667 9999999999999999999999976431 11122211112221110 011110 01111111111
Q ss_pred HHhhccHHHhHHHHHHHHHcCCCcEEEECC---CchHHHHHHHcCCcEEEEecCchhHHHHHHHhhhccchHHHHHHHHh
Q 001947 97 ETAVAPRKSILKDEVEWLNSIKADLVVSDV---VPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHHRSIVWQIAE 173 (992)
Q Consensus 97 ~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~---~~~a~~aA~~~gIP~v~is~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 173 (992)
...........++++++||++++.. .+.+...+..+++|++.+.+..+...... ...
T Consensus 74 -----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~~---------------~~~ 133 (351)
T d1f0ka_ 74 -----RIFNAWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTNK---------------WLA 133 (351)
T ss_dssp -----HHHHHHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHHH---------------HHT
T ss_pred -----HHHHhHHHHHHHhhccccceeeecccchhhhhhhhhhhcccceeecccccccchhHH---------------Hhh
Confidence 1122345556788999999999865 34456678889999998854332211111 111
Q ss_pred hccccceeeecCCCCCCCCCCceeecCcccc--cCCCChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHH-H---hhCC
Q 001947 174 DYSHCEFLIRLPGYCPMPAFRDVIDVPLVVR--RLHKSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLK-E---EYLP 245 (992)
Q Consensus 174 ~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~--~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll-~---~l~~ 245 (992)
.+ .+....... +.......++...+ ....... ........+...+++++|+.|.. .+.+ + .+ .
T Consensus 134 ~~--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l-~ 204 (351)
T d1f0ka_ 134 KI--ATKVMQAFP----GAFPNAEVVGNPVRTDVLALPLP--QQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKL-G 204 (351)
T ss_dssp TT--CSEEEESST----TSSSSCEECCCCCCHHHHTSCCH--HHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHH-G
T ss_pred hh--cceeecccc----ccccceeEEcCCcccccccchhH--HhhhhcccCCcccccccccchhhhhHHHHHHhhhhh-c
Confidence 11 111111110 01111122222111 1111111 12234445666788888888874 1222 2 22 2
Q ss_pred CCcEEEEeCCCCCC----------CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHHcCCcEEEEeCCCC-CChH
Q 001947 246 SGWKCLVCGASDSQ----------LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALAYKLPFVFVRRDYF-NEEP 314 (992)
Q Consensus 246 ~~~~~Vv~G~~~~~----------l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~-~EQ~ 314 (992)
....+++.+..... ...++.+.+|+++++++|+.||++|||||++|++|++++|+|+|++|.+.. .||.
T Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~lm~~adl~It~~G~~T~~Eal~~g~P~I~iP~~~~~~~Q~ 284 (351)
T d1f0ka_ 205 DSVTIWHQSGKGSQQSVEQAYAEAGQPQHKVTEFIDDMAAAYAWADVVVCRSGALTVSEIAAAGLPALFVPFQHKDRQQY 284 (351)
T ss_dssp GGEEEEEECCTTCHHHHHHHHHHTTCTTSEEESCCSCHHHHHHHCSEEEECCCHHHHHHHHHHTCCEEECCCCCTTCHHH
T ss_pred ccceeeeeccccchhhhhhhhcccccccceeeeehhhHHHHHHhCchhhccccchHHHHHHHhCCceeeeecccCCchHH
Confidence 22344444433221 467889999999999999999999999999999999999999999996533 4799
Q ss_pred HHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC-------ccCCCCHHHHHHHHHHHHHc
Q 001947 315 FLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC-------YEGGINGGEVAAHILQETAI 372 (992)
Q Consensus 315 ~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~-------~~~~~~G~~~aA~~I~~~~~ 372 (992)
.||+++++.|+|+.++..+++++.+.++|.++..+... .-...+|++++|+.|++++.
T Consensus 285 ~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l~~~~~~~~~~~~~~~~~~~~a~~i~~~i~~l~~ 349 (351)
T d1f0ka_ 285 WNALPLEKAGAAKIIEQPQLSVDAVANTLAGWSRETLLTMAERARAASIPDATERVANEVSRVAR 349 (351)
T ss_dssp HHHHHHHHTTSEEECCGGGCCHHHHHHHHHTCCHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEechhhCCHHHHHHHHHhhCHHHHHHHHHHHHccCCccHHHHHHHHHHHHHh
Confidence 99999999999999998888888888887764322110 11577999999999999863
No 10
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.93 E-value=7.4e-26 Score=237.81 Aligned_cols=181 Identities=20% Similarity=0.208 Sum_probs=124.5
Q ss_pred ceEEEEcCccccccccccccCCCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCC
Q 001947 495 EIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 574 (992)
Q Consensus 495 ~~~~~~APGRv~L~GeH~dy~gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 574 (992)
+.++++|||||+|+|||+||+|++||+|||++++++.+++++++++++.+.+. +..
T Consensus 4 ~~~~vsAPGKv~L~GEh~v~~G~~al~~ai~~~~~v~v~~~~~~~v~i~s~~~------------~~~------------ 59 (225)
T d1kvka1 4 EVLLVSAPGKVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNV------------GIK------------ 59 (225)
T ss_dssp SCEEEEEEEEEEEECTTGGGGTCCEEEEEEEEEEEEEEEECSSSEEEEEETTT------------TEE------------
T ss_pred CeEEEEeceEEEEEeCceeecCCCEEEEEecccEEEEEEECCCCeEEEEECCC------------Ccc------------
Confidence 46789999999999999999999999999999999999999988776654321 000
Q ss_pred CceeccCCccc-------------cC-CCCcc-hhhhhcccCCC--CCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEe
Q 001947 575 PTFDMDLSDFM-------------DE-GKPMS-YEKAKKYFDTN--PSQKWAAYVAGTILVLMTELGVRFEDSISMLVSS 637 (992)
Q Consensus 575 ~~~~~~l~~l~-------------~~-~~~~~-~~~~~~~~~~~--~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s 637 (992)
.++++.++. .. ..... ......+.... ....|.+.+...+.. +...... .+|+++.|.|
T Consensus 60 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~g~~i~i~s 135 (225)
T d1kvka1 60 --QVWDVATLQLLDTGFLEQGDVPAPTLEQLEKLKKVAGLPRDCVGNEGLSLLAFLYLYLA-ICRKQRT-LPSLDIMVWS 135 (225)
T ss_dssp --EEEEHHHHHTSCC----------------CHHHHHHTSSCCCSCTTHHHHHHHHHHHHH-HHTTSSS-CCCEEEEEEE
T ss_pred --eEEecccccccccccccccccCcchhhhhhhHhhhhccccccchhhhhHHHHHHHHHHH-HhccccC-CCCeEEEEeC
Confidence 111110000 00 00000 00001111111 111223333333332 2222333 3799999999
Q ss_pred CCCCCCCCchHHHHHHHHHHHHHHHhCCCC---------------CHHHHHHHHHHHhccccCCCCCccchhhhhccCcc
Q 001947 638 AVPEGKGVSSSASVEVASMSAIAAAHGLNI---------------HPRDLALLCQKVENHIVGAPCGVMDQMASACGEAN 702 (992)
Q Consensus 638 ~iP~g~GLgSSAA~~va~~~al~~~~~~~l---------------~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~~ 702 (992)
++|.++|||||||++||++.|++.+++... +.++|++||+.+|+.+||.||| |||++++|||
T Consensus 136 ~lP~g~GLGSSAAl~va~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~lA~~~E~~~~g~~SG-~D~a~~~~Gg-- 212 (225)
T d1kvka1 136 ELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSG-VDNSVSTWGG-- 212 (225)
T ss_dssp SSCTTSSSCHHHHHHHHHHHHHHHHTTSSCCGGGGCCSEECCCHHHHHHHHHHHHHHHHHHHSSCCS-HHHHHHHHCS--
T ss_pred CCCCCcccccchHHHHHHHHHHHHHhCcccCccccchhccccchhhHHHHHHHHHHHHHHhCCCCcH-HHHHHHhcCc--
Confidence 999999999999999999999999999844 4578999999999999999999 8999999999
Q ss_pred eEEEE
Q 001947 703 KLLAM 707 (992)
Q Consensus 703 ~~~~~ 707 (992)
++.+
T Consensus 213 -~i~f 216 (225)
T d1kvka1 213 -ALRY 216 (225)
T ss_dssp -EEEE
T ss_pred -eEEE
Confidence 4554
No 11
>d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.92 E-value=1.3e-23 Score=236.71 Aligned_cols=341 Identities=13% Similarity=0.055 Sum_probs=192.1
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCCcccccccCCCceeeeeecccCCcc--cccccccChHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAV--QADALTVDRLASLE 93 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~--~~~~~~~~~~~~~~ 93 (992)
|+|++...|. .||++|+++||++|+++||+|+|++... +.+.+...++.+.+.+...... ............+.
T Consensus 1 mril~~~~gt-~Ghi~P~laLA~~L~~rGh~V~~~~~~~---~~~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (391)
T d1pn3a_ 1 MRVLITGCGS-RGDTEPLVALAARLRELGADARMCLPPD---YVERCAEVGVPMVPVGRAVRAGAREPGELPPGAAEVVT 76 (391)
T ss_dssp CEEEEEEESS-HHHHHHHHHHHHHHHHTTCEEEEEECGG---GHHHHHHHTCCEEECSSCSSGGGSCTTCCCTTCGGGHH
T ss_pred CEEEEEcCCC-hhHHHHHHHHHHHHHHCCCEEEEEEChh---hHhHHHHCCCeEEECCccHHHHhhChhhhhHHHHHHHH
Confidence 5676654433 3999999999999999999999998643 1121111111222211111100 00010111111111
Q ss_pred HHHHHhhccHHHhHHHHHHHHHcCCCcEEEECCC-c---hHHHHHHHcCCcEEEEecCchh-H----HHHHHHhhh--cc
Q 001947 94 KYSETAVAPRKSILKDEVEWLNSIKADLVVSDVV-P---VACRAAADAGIRSVCVTNFSWD-F----IYAEYVMAA--GH 162 (992)
Q Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~~-~---~a~~aA~~~gIP~v~is~~~~~-~----~~~~~~~~~--~~ 162 (992)
.+ ....++...+.+ .+||+||+|.. + ++..+|...++|.+.+....+. + ......... ..
T Consensus 77 ~~-------~~~~~~~l~~~~--~~~D~vi~~~~~~~~~~~~~~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (391)
T d1pn3a_ 77 EV-------VAEWFDKVPAAI--EGCDAVVTTGLLPAAVAVRSMAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQGADR 147 (391)
T ss_dssp HH-------HHHHHHHHHHHH--TTCSEEEEEECHHHHHHHHHHHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHHHHHH
T ss_pred HH-------HHHHHHHHHHHh--cCCCeEEEcccCchHHHHHHHHHHcCCceEEeeccccccccccccchhhHHHHHHHH
Confidence 11 111222222222 36999999863 2 3345678899999887432210 0 000000000 00
Q ss_pred chHHHHHHHHhhccc-----------cc-eeeecCCCC--CCCCCCceeecCccccc-CCCChHHHHHHhCCCCCCcEEE
Q 001947 163 HHRSIVWQIAEDYSH-----------CE-FLIRLPGYC--PMPAFRDVIDVPLVVRR-LHKSRKEVRKELGIEDDVKLLI 227 (992)
Q Consensus 163 ~~~~i~~~l~~~y~~-----------~d-~ll~~~~~~--~~p~~~~v~~vp~~~~~-~~~~r~e~r~~l~~~~d~~~Vl 227 (992)
......+.....+.. .+ .++...+.. ..+.......+++.... ....+.++..+.. ..++.|+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~v~ 225 (391)
T d1pn3a_ 148 LFGDAVNSHRASIGLPPVEHLYDYGYTDQPWLAADPVLSPLRPTDLGTVQTGAWILPDERPLSAELEAFLA--AGSTPVY 225 (391)
T ss_dssp HTHHHHHHHHHTTSCCCCCCHHHHHHCSSCEECSCTTTSCCCTTCCSCCBCCCCCCCCCCCCCHHHHHHTT--SSSCCEE
T ss_pred HHHHHHHHHHHHhcCcccccccccccccceeeccchhhhccCCCCCCeeeecCcccCccccCCHHHhhhhc--cCCCeEE
Confidence 000111111111100 00 111111111 11111233444443332 2223344544433 3456788
Q ss_pred EEcCCCCCh--hhHH----HhhCCCCcEEEEe-CCCCCC---CCCCeEEcCCCCCHHHHHhhcCEEEecCChhHHHHHHH
Q 001947 228 LNFGGQPAG--WKLK----EEYLPSGWKCLVC-GASDSQ---LPPNFIKLPKDAYTPDFMAASDCMLGKIGYGTVSEALA 297 (992)
Q Consensus 228 vs~Gg~~~~--~~ll----~~l~~~~~~~Vv~-G~~~~~---l~~nv~v~~f~~~~p~lL~aaDlvIt~~G~~Tv~Eal~ 297 (992)
+++|+.... ..+. ..+...++.+++. +..... .++|+.+.+|++ .+++|+++|+||+|||+||++|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~p-~~~ll~~a~~~v~hgG~~t~~Eal~ 304 (391)
T d1pn3a_ 226 VGFGSSSRPATADAAKMAIKAVRASGRRIVLSRGWADLVLPDDGADCFVVGEVN-LQELFGRVAAAIHHDSAGTTLLAMR 304 (391)
T ss_dssp EECTTCCSTHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSSCCTTCCEESSCC-HHHHHTTSSCEEEESCHHHHHHHHH
T ss_pred EeccccccccHHHHHHHHHHHHHhcCCEEEEeccccccccccCCCCEEEecccC-HHHHHhhccEEEecCchHHHHHHHH
Confidence 999877653 1222 2233344444433 332222 688999999874 6789999999999999999999999
Q ss_pred cCCcEEEEeCCC--CCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC-------ccCCCCHHHHHHHHHH
Q 001947 298 YKLPFVFVRRDY--FNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC-------YEGGINGGEVAAHILQ 368 (992)
Q Consensus 298 ~GvP~V~iP~~~--~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~-------~~~~~~G~~~aA~~I~ 368 (992)
+|+|+|++|... ..||+.||+++++.|+|+.++..+++++.|.++|+++++++.+ .....+|+.++|+.|+
T Consensus 305 ~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~~~r~~a~~~a~~~~~~g~~~aa~~i~ 384 (391)
T d1pn3a_ 305 AGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAPEIRARATTVADTIRADGTTVAAQLLF 384 (391)
T ss_dssp HTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTSTTHHHHHHHHGGGSCSCHHHHHHHHHH
T ss_pred hCCcEEEeccccCCcchHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 999999999643 3569999999999999999999999999999999999964311 1145689999999999
Q ss_pred HHHc
Q 001947 369 ETAI 372 (992)
Q Consensus 369 ~~~~ 372 (992)
+.++
T Consensus 385 ~~l~ 388 (391)
T d1pn3a_ 385 DAVS 388 (391)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9875
No 12
>d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]}
Probab=99.90 E-value=6.9e-23 Score=230.75 Aligned_cols=157 Identities=16% Similarity=0.130 Sum_probs=116.1
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCChhh----HHHhhCCCCcEE-EEeCCCCCC---CCCCeEEcCCCCCHHHHHhhcCE
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAGWK----LKEEYLPSGWKC-LVCGASDSQ---LPPNFIKLPKDAYTPDFMAASDC 282 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~~~----ll~~l~~~~~~~-Vv~G~~~~~---l~~nv~v~~f~~~~p~lL~aaDl 282 (992)
.++..++. ..+++|++++|+...... +.+.+...+..+ ++.|..... .++|+++.+|.+ .+++|+++|+
T Consensus 228 ~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~nv~~~~~~p-~~~~l~~~~~ 304 (401)
T d1iira_ 228 PELAAFLD--AGPPPVYLGFGSLGAPADAVRVAIDAIRAHGRRVILSRGWADLVLPDDGADCFAIGEVN-HQVLFGRVAA 304 (401)
T ss_dssp HHHHHHHH--TSSCCEEEECC---CCHHHHHHHHHHHHHTTCCEEECTTCTTCCCSSCGGGEEECSSCC-HHHHGGGSSE
T ss_pred HHHHHhhc--cCCCeEEEccCccccchHHHHHHHHHHHHcCCeEEEeccCCccccccCCCCEEEEeccC-HHHHHhhcCE
Confidence 34444443 455678899987766422 233333333333 334443322 689999999875 5689999999
Q ss_pred EEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCc-------cC
Q 001947 283 MLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY-------EG 355 (992)
Q Consensus 283 vIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~-------~~ 355 (992)
||||||+||++|++++|+|+|++| .+.||+.||+++++.|+|+.++.++++++.|.++|+++|+++.+. ..
T Consensus 305 ~V~hgG~~t~~Eal~~GvP~v~~P--~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ai~~~l~~~~~~~a~~~~~~~ 382 (401)
T d1iira_ 305 VIHHGGAGTTHVAARAGAPQILLP--QMADQPYYAGRVAELGVGVAHDGPIPTFDSLSAALATALTPETHARATAVAGTI 382 (401)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHS
T ss_pred EEecCCchHHHHHHHhCCCEEEcc--ccccHHHHHHHHHHCCCEEEcCcCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999999999999999999998 567999999999999999999999999999999999999642110 14
Q ss_pred CCCHHHHHHHHHHHHHc
Q 001947 356 GINGGEVAAHILQETAI 372 (992)
Q Consensus 356 ~~~G~~~aA~~I~~~~~ 372 (992)
..+|..++|+.|++.+.
T Consensus 383 ~~~~~~~aa~~i~~~i~ 399 (401)
T d1iira_ 383 RTDGAAVAARLLLDAVS 399 (401)
T ss_dssp CSCHHHHHHHHHHHHHH
T ss_pred HhcChHHHHHHHHHHHh
Confidence 56788888888888763
No 13
>d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]}
Probab=99.89 E-value=2.9e-22 Score=230.58 Aligned_cols=137 Identities=13% Similarity=0.169 Sum_probs=103.4
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh-hh----HHHhhCCCCcEEEEe-CC-CC----CC----CCCCeEEcCCCCCHHH
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG-WK----LKEEYLPSGWKCLVC-GA-SD----SQ----LPPNFIKLPKDAYTPD 275 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~-~~----ll~~l~~~~~~~Vv~-G~-~~----~~----l~~nv~v~~f~~~~p~ 275 (992)
.++..++...+.+++|++++|+.... .+ ++..+...+..+++. +. .. +. .+.|+.+.++.+ ..+
T Consensus 253 ~~~~~~~~~~~~~~~v~~s~gs~~~~~~~~~~~~~~~~~~~~~~vl~~~~~~~~~~l~~~~~~~~~~nv~~~~~~p-q~~ 331 (450)
T d2c1xa1 253 TGCLQWLKERKPTSVVYISFGTVTTPPPAEVVALSEALEASRVPFIWSLRDKARVHLPEGFLEKTRGYGMVVPWAP-QAE 331 (450)
T ss_dssp -CHHHHHHTSCTTCEEEEECCSSCCCCHHHHHHHHHHHHHHTCCEEEECCGGGGGGSCTTHHHHHTTTEEEESCCC-HHH
T ss_pred hhhccccccCCccceeeecccccccCCHHHHHHHHHHHHhcCCeEEEEECCCccccCChhhhhhccccccccccCC-hHh
Confidence 34555666556788999999988653 22 333333334444433 21 11 11 367888886543 237
Q ss_pred HH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHH-cCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 276 FM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEF-YQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 276 lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~-~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
+| +.+++||||||+||++||+++|||||++| .+.||+.||+++++ .|+|+.++..+++++.+.++|.++|+++
T Consensus 332 lL~hp~~~~fItHGG~~s~~eal~~GvP~v~~P--~~~DQ~~na~rv~~~~G~G~~l~~~~~t~~~l~~ai~~vL~d~ 407 (450)
T d2c1xa1 332 VLAHEAVGAFVTHCGWNSLWESVAGGVPLICRP--FFGDQRLNGRMVEDVLEIGVRIEGGVFTKSGLMSCFDQILSQE 407 (450)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHTSCCEEECGGGSCCHHHHHHHHHHHHHSH
T ss_pred hhccCceeEEEccCCccHHHHHHHcCCCEEecc--cccchHHHHHHHHHHcCcEEEecCCCcCHHHHHHHHHHHhcCc
Confidence 77 67999999999999999999999999999 67899999999976 6999999999999999999999999865
No 14
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=99.89 E-value=3.4e-23 Score=212.16 Aligned_cols=154 Identities=19% Similarity=0.146 Sum_probs=124.0
Q ss_pred EEEEcCccccccccccccC-CCeeeccccccceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCCC
Q 001947 497 FVARAPGRLDVMGGIADYS-GSLVLQMPIREACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRGP 575 (992)
Q Consensus 497 ~~~~APGRv~L~GeH~dy~-gg~vl~~aI~~~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~~ 575 (992)
+.++|||||+|+|||++++ |+++|++|||+++++.++++++.++. ..+..
T Consensus 2 i~v~apGK~iL~GE~aVv~~G~~ala~ai~~~~~v~v~~~~~~~i~---------------------~~~~~-------- 52 (194)
T d1k47a1 2 IAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIY---------------------SDMFD-------- 52 (194)
T ss_dssp EEEEEEEEEEEECTTGGGSTTCEEEEEEEEEEEEEEEEECSSCEEE---------------------EEC----------
T ss_pred eEEEeCcEEEEEeeeEEecCCCeEEEEEEeceEEEEEEECCCceEE---------------------eeccc--------
Confidence 5789999999999999987 99999999999999999998875431 11110
Q ss_pred ceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCC---CCchHHHHH
Q 001947 576 TFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGK---GVSSSASVE 652 (992)
Q Consensus 576 ~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~---GLgSSAA~~ 652 (992)
+..+.. .++...|.+.+...+..++++.+.+. .|+++.|.|++|.++ |||||||++
T Consensus 53 -~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~i~s~ip~~~~~~GLGSSAA~~ 111 (194)
T d1k47a1 53 -FAVDLR-------------------PNPDYSLIQETIALMGDFLAVRGQNL-RPFSLAIYGKMEREGKKFGLGSSGSVV 111 (194)
T ss_dssp ---------------------------CCCHHHHHHHHHHHHHHHHHTTCCC-CCEEEEEESHHHHSTTSSCSCHHHHHH
T ss_pred -cccccc-------------------cCcchhHHHHHHHHHHHHHHHcCCCC-CCeEEEEEccCccccCCCcccchHHHH
Confidence 011110 01222344444444555667778776 799999999999998 999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 653 VASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 653 va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
||++.|++.+++.++++++++++|..+|+.++|.+|| +|++++++||.
T Consensus 112 va~~~al~~~~~~~ls~~~i~~lA~~~e~~~~g~~SG-~D~a~s~~GG~ 159 (194)
T d1k47a1 112 VLVVKALLALYNLSVDQNLLFKLTSAVLLKRGDNGSM-GDLACIAAEDL 159 (194)
T ss_dssp HHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTTCCSCC-HHHHHHHHTSC
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhccCCCc-cchhHHHcCCe
Confidence 9999999999999999999999999999999999999 79999999995
No 15
>d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]}
Probab=99.85 E-value=4.4e-20 Score=211.98 Aligned_cols=326 Identities=13% Similarity=0.086 Sum_probs=177.5
Q ss_pred cEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEE--EeCCCCc--cccccc-----CCCceeeeeecccCCcccccccc
Q 001947 15 HLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHV--VTGAPDF--VFTSEI-----QSPRLFIRKVLLDCGAVQADALT 85 (992)
Q Consensus 15 ~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~--~~~~~~~--~~~~~i-----~~~~~~~~~~~~~~g~~~~~~~~ 85 (992)
+.+|+| ++.++.||++|+++||++|.++||+|+| ++..... ...... ..+.+.+... ..+........
T Consensus 7 ~~hil~-~p~P~~GH~~P~l~lA~~L~~rGH~V~vt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 83 (461)
T d2acva1 7 NSELIF-IPAPGIGHLASALEFAKLLTNHDKNLYITVFCIKFPGMPFADSYIKSVLASQPQIQLIDL--PEVEPPPQELL 83 (461)
T ss_dssp CEEEEE-ECCSSTTTHHHHHHHHHHHHHTCTTEEEEEEECCCTTCCCCHHHHHHHHCSCTTEEEEEC--CCCCCCCGGGG
T ss_pred CCeEEE-ecChhhhHHHHHHHHHHHHHHCCCCeEEEEEeCCccchhhhhhcccccccCCCCeeEEEC--CCCCCchhhhh
Confidence 345654 5789999999999999999999999875 3332211 111110 0122222221 11111000001
Q ss_pred cChHHHHHHHHHHhhccHHHhHHHHHHHHHcCCCcEEEECC-CchHHHHHHHcCCcEEEEecCchh--HHHHHHHhhh--
Q 001947 86 VDRLASLEKYSETAVAPRKSILKDEVEWLNSIKADLVVSDV-VPVACRAAADAGIRSVCVTNFSWD--FIYAEYVMAA-- 160 (992)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVsD~-~~~a~~aA~~~gIP~v~is~~~~~--~~~~~~~~~~-- 160 (992)
......+..+.+ .....+.+..+.+...++|+|+.|. .+++..+|+.+++|.+........ ..+.. .+..
T Consensus 84 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~d~vi~d~~~~~~~~~a~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~ 158 (461)
T d2acva1 84 KSPEFYILTFLE----SLIPHVKATIKTILSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLTSNVGFLSLMLS-LKNRQI 158 (461)
T ss_dssp GSHHHHHHHHHH----HTHHHHHHHHHHHCCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEESSCHHHHHHHHH-GGGSCT
T ss_pred hcHHHHHHHHHH----HHHHHHHHHHHHhccCCCeEEEEeccchHHHHHHHHhCCCeEEEecccchhhHHhhc-cccccc
Confidence 111111111111 1222344555566677899999987 667888999999999887432211 00000 0000
Q ss_pred --c--------------c------------------chHHHHHHHHhhccccceeeecCC-----------CCCCCCCCc
Q 001947 161 --G--------------H------------------HHRSIVWQIAEDYSHCEFLIRLPG-----------YCPMPAFRD 195 (992)
Q Consensus 161 --~--------------~------------------~~~~i~~~l~~~y~~~d~ll~~~~-----------~~~~p~~~~ 195 (992)
. . ............+..++.+..... ....+..+.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (461)
T d2acva1 159 EEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSDLEQSSIDALYDHDEKIPP 238 (461)
T ss_dssp TCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHHHHHHHHHHHHHHCTTSCC
T ss_pred cccccccccccccccccccccchhhhhhhhhhhccchhHHHHHHHHHhhhccccccccccccccchhhhhhhhcccCCCC
Confidence 0 0 000000011111111111111000 001122234
Q ss_pred eeecCccccc-----CC---CChHHHHHHhCCCCCCcEEEEEcCCCCCh--hhHHH----hhCCCCcEEEEe-CCCC---
Q 001947 196 VIDVPLVVRR-----LH---KSRKEVRKELGIEDDVKLLILNFGGQPAG--WKLKE----EYLPSGWKCLVC-GASD--- 257 (992)
Q Consensus 196 v~~vp~~~~~-----~~---~~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~ll~----~l~~~~~~~Vv~-G~~~--- 257 (992)
++.+++.... .. ...+++..++.......++++++|+.... .+.+. .+...+..+++. +...
T Consensus 239 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (461)
T d2acva1 239 IYAVGPLLDLKGQPNPKLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVF 318 (461)
T ss_dssp EEECCCCCCSSCCCBTTBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGS
T ss_pred ceeeccccccCCccCCCccccCcHHHHHHHhhCCccceeeeeccccccCCCHHHHHHHHHHHHhcCccEEEEeecccccC
Confidence 4555543221 11 11234445555445566777777766542 22222 232234444433 2211
Q ss_pred -CC------CCCCeEEcCCCCCHHHHH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHH-HHcCcEE
Q 001947 258 -SQ------LPPNFIKLPKDAYTPDFM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNML-EFYQGGV 327 (992)
Q Consensus 258 -~~------l~~nv~v~~f~~~~p~lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~l-e~~G~Gi 327 (992)
.. .+.|+.+..+. +.++++ +.||+||||||+||++||+++|||||++| .+.||+.||+++ ++.|+|+
T Consensus 319 ~~~~~~~~~~~~n~~v~~~~-pq~~~l~~p~~~~fItHGG~gs~~eAl~~GVP~l~~P--~~~DQ~~nA~rlve~~G~G~ 395 (461)
T d2acva1 319 PEGFLEWMELEGKGMICGWA-PQVEVLAHKAIGGFVSHCGWNSILESMWFGVPILTWP--IYAEQQLNAFRLVKEWGVGL 395 (461)
T ss_dssp CTTHHHHHHHHCSEEEESSC-CHHHHHHSTTEEEEEECCCHHHHHHHHHTTCCEEECC--CSTTHHHHHHHHHHTSCCEE
T ss_pred CccchhhhccCCCeEEEecC-CHHHHHhcccCCEEEecCCccHHHHHHHcCCCEEeCC--cccchHHHHHHHHHHhCceE
Confidence 11 36788877654 345555 78999999999999999999999999999 688999999997 6789999
Q ss_pred EEecCC------CChhhHHHHHHHHhhCCC
Q 001947 328 EMIRRD------LLTGHWKPYLERAISLKP 351 (992)
Q Consensus 328 ~v~~~~------~~~~~l~~al~~ll~~~~ 351 (992)
.++... ++++++.++|+++|++++
T Consensus 396 ~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~ 425 (461)
T d2acva1 396 GLRVDYRKGSDVVAAEEIEKGLKDLMDKDS 425 (461)
T ss_dssp ESCSSCCTTCCCCCHHHHHHHHHHHTCTTC
T ss_pred EeeccccccCCccCHHHHHHHHHHHhhCCH
Confidence 987543 788999999999997543
No 16
>d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]}
Probab=99.84 E-value=1.4e-19 Score=208.27 Aligned_cols=134 Identities=10% Similarity=0.116 Sum_probs=99.6
Q ss_pred HHHHhCCCCCCcEEEEEcCCCCCh-h----hHHHhhCCCCcEEEE-eCCCC-C-C-----------CCCCeEEcCCCCCH
Q 001947 213 VRKELGIEDDVKLLILNFGGQPAG-W----KLKEEYLPSGWKCLV-CGASD-S-Q-----------LPPNFIKLPKDAYT 273 (992)
Q Consensus 213 ~r~~l~~~~d~~~Vlvs~Gg~~~~-~----~ll~~l~~~~~~~Vv-~G~~~-~-~-----------l~~nv~v~~f~~~~ 273 (992)
...++.......++++++|+.... . .++..+......+++ .+... . . .+.|+.+..|.+ .
T Consensus 278 ~~~~~~~~~~~~~v~~~~gs~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Nv~~~~~~P-q 356 (473)
T d2pq6a1 278 CLDWLESKEPGSVVYVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCP-Q 356 (473)
T ss_dssp HHHHHTTSCTTCEEEEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCC-H
T ss_pred HHHHhhhcCCCceeeeccCccccccHHHHHHHHHHHHhcCCeEEEEEccCCcccccccCcccchhhccCceEEeeeCC-H
Confidence 334555556677899999987763 1 233333333444443 33211 1 0 357999887554 2
Q ss_pred HHHH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecCCCChhhHHHHHHHHhhCC
Q 001947 274 PDFM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRRDLLTGHWKPYLERAISLK 350 (992)
Q Consensus 274 p~lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~~G~Gi~v~~~~~~~~~l~~al~~ll~~~ 350 (992)
.++| +.|++||||||+||++||+++|||||++| .+.||+.||++++ +.|+|+.++ .+++++.+.++|+++|+++
T Consensus 357 ~~lL~hp~~~~fItHGG~~s~~Eal~~GVP~lv~P--~~~DQ~~na~rv~~~~G~G~~l~-~~~t~~~l~~ai~~vl~d~ 433 (473)
T d2pq6a1 357 DKVLNHPSIGGFLTHCGWNSTTESICAGVPMLCWP--FFADQPTDCRFICNEWEIGMEID-TNVKREELAKLINEVIAGD 433 (473)
T ss_dssp HHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHTSCCEEECC-SSCCHHHHHHHHHHHHTSH
T ss_pred HHHhcCCcCcEEEecCCccHHHHHHHcCCCEEecc--chhhhHHHHHHHHHHcCeEEeeC-CCcCHHHHHHHHHHHHcCC
Confidence 3778 68999999999999999999999999999 6889999999995 569999998 4789999999999999864
No 17
>d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.81 E-value=2.7e-18 Score=197.48 Aligned_cols=137 Identities=13% Similarity=0.109 Sum_probs=97.4
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--h---hHHHhhCCCCcEEEE-eCCCC-C------------C----C-------
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG--W---KLKEEYLPSGWKCLV-CGASD-S------------Q----L------- 260 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~---~ll~~l~~~~~~~Vv-~G~~~-~------------~----l------- 260 (992)
+++.+++......+++++++|+.... . .+...+......+++ .+... . . +
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~ 330 (471)
T d2vcha1 251 SECLKWLDNQPLGSVLYVSFGSGGTLTCEQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLER 330 (471)
T ss_dssp CHHHHHHHTSCTTCEEEEECTTTCCCCHHHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHH
T ss_pred hhHHHHHHhcCCccccccccccccCCCHHHHHHHHHHHHhhcCCeEEEeccccccccccccccccccchhhhCCchhhhh
Confidence 45666666666778899999887653 1 122222122222222 11110 0 0 2
Q ss_pred --CCCeEEcCCCCCHHHHH--hhcCEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHH-HcCcEEEEecCC--
Q 001947 261 --PPNFIKLPKDAYTPDFM--AASDCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLE-FYQGGVEMIRRD-- 333 (992)
Q Consensus 261 --~~nv~v~~f~~~~p~lL--~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le-~~G~Gi~v~~~~-- 333 (992)
++|+.+.+|.+. .++| +++++||||||+||++||+++|||||++| .+.||+.||++++ ..|+|+.+...+
T Consensus 331 ~~~~nv~~~~w~Pq-~~lL~hp~~~~fVtHGG~gS~~EAl~~GvP~v~~P--~~~DQ~~nA~rv~e~lG~Gv~l~~~~~~ 407 (471)
T d2vcha1 331 TKKRGFVIPFWAPQ-AQVLAHPSTGGFLTHCGWNSTLESVVSGIPLIAWP--LYAEQKMNAVLLSEDIRAALRPRAGDDG 407 (471)
T ss_dssp TTTTEEEEESCCCH-HHHHHSTTEEEEEECCCHHHHHHHHHHTCCEEECC--CSTTHHHHHHHHHHTTCCEECCCCCTTS
T ss_pred ccCCCeeecccCCH-HHHhcCccCCEEEecCCccHHHHHHHcCCCEEEcc--cccccHHHHHHHHHHheeEEEEecCCCC
Confidence 356888865432 2788 57999999999999999999999999999 6889999999994 579999997654
Q ss_pred -CChhhHHHHHHHHhhCC
Q 001947 334 -LLTGHWKPYLERAISLK 350 (992)
Q Consensus 334 -~~~~~l~~al~~ll~~~ 350 (992)
++++.+.++|+++++++
T Consensus 408 ~~t~~~l~~ai~~vl~~~ 425 (471)
T d2vcha1 408 LVRREEVARVVKGLMEGE 425 (471)
T ss_dssp CCCHHHHHHHHHHHHTST
T ss_pred cCCHHHHHHHHHHHhCCc
Confidence 78899999999999864
No 18
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.79 E-value=9.8e-20 Score=181.09 Aligned_cols=114 Identities=24% Similarity=0.258 Sum_probs=86.8
Q ss_pred cccccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCccccee
Q 001947 846 PVCHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKI 925 (992)
Q Consensus 846 r~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Gakl 925 (992)
++.|++.|..++.+.. .....++|++.||++|+++|..|++++||||++|+|++.|++ .| +||||
T Consensus 42 ~~~~l~~~a~~~l~~~---~~~~~~~d~~~lg~lm~~~~~lL~~lgVS~~~ld~lv~~a~~-----------~g-~gaKl 106 (169)
T d1kvka2 42 SIDAISLECERVLGEM---AAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAA-----------HG-LHSKL 106 (169)
T ss_dssp HHHHHHHHHHHHHHHH---TTCCCHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHH-----------TT-CEEEE
T ss_pred HHhHHHHHHHHHhhhh---hhhcccchHHHHHHHHHHhHHHHHhcCcChHHHHHHHHHHHH-----------cC-ccccc
Confidence 3455655554443211 111223599999999999999999999999999999999987 57 79999
Q ss_pred eccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEeecCCCCcee
Q 001947 926 TGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEGSSPGAGKF 976 (992)
Q Consensus 926 tGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~~~~Ga~~~ 976 (992)
||||+|||+++|.++... .++++++.++|+ ..|++.......++|+++.
T Consensus 107 tGAGgGGc~ial~~~~~~-~~~~~~i~~~l~-~~Gf~~~~~~i~~~Gv~i~ 155 (169)
T d1kvka2 107 TGAGGGGCGITLLKPGLE-RAKVEAAKQALT-GCGFDCWETSIGAPGVSMH 155 (169)
T ss_dssp CSSCSSSEEEEEECTTCC-HHHHHHHHHHHH-HTTCEEEEEEESCCCSEEE
T ss_pred cCCCCCCeEEEEecccch-HHHHHHHHHHHH-HcCCeEEEEecCCCcEEEe
Confidence 999999999988876653 678899998886 5677643333468998753
No 19
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.59 E-value=5.3e-15 Score=145.79 Aligned_cols=141 Identities=18% Similarity=0.215 Sum_probs=111.6
Q ss_pred EEEEcCccc-cccccccccCCCeeecccccc-ceEEEEEecCcchhhhhhhhhhccCCCCCCCCCeEEEEecccccCCCC
Q 001947 497 FVARAPGRL-DVMGGIADYSGSLVLQMPIRE-ACHVALQKISPSKQRLWKHALARHNDKGQGPMPVLQIVSYGSELSNRG 574 (992)
Q Consensus 497 ~~~~APGRv-~L~GeH~dy~gg~vl~~aI~~-~~~v~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~i~s~~~~~~~~~ 574 (992)
+.++||+.. || | .|.-+|.+||+. +.++.+.++++.++ .+...
T Consensus 3 i~v~~Pas~aNl-g-----~GFD~lg~Al~~~~d~v~v~~~~~~~i---------------------~i~~~-------- 47 (163)
T d1h72c1 3 VRVKAPCTSANL-G-----VGFDVFGLCLKEPYDVIEVEAIDDKEI---------------------IIEVD-------- 47 (163)
T ss_dssp EEEEEEEEEECT-G-----GGTTTEEEEEEEEEEEEEEEEESSSSE---------------------EEEES--------
T ss_pred EEEEEeccHHhc-c-----ccHhHhhhhhcCCccEEEEEECCCCeE---------------------EEEec--------
Confidence 578999999 76 4 466799999985 78899998876432 22111
Q ss_pred CceeccCCccccCCCCcchhhhhcccCCCCCCchHHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHH
Q 001947 575 PTFDMDLSDFMDEGKPMSYEKAKKYFDTNPSQKWAAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVA 654 (992)
Q Consensus 575 ~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~w~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va 654 (992)
-.++ +.....|++..+++.+++..+.+ .|+++.+.++||.|+|||||||..+|
T Consensus 48 ------~~~i-------------------~~~~~~n~~~~~~~~~~~~~~~~--~~~~i~i~~~IP~gaGLGsSSA~a~a 100 (163)
T d1h72c1 48 ------DKNI-------------------PTDPDKNVAGIVAKKMIDDFNIG--KGVKITIKKGVKAGSGLGSSAASSAG 100 (163)
T ss_dssp ------CTTS-------------------CCCTTTSHHHHHHHHHHHHTTCC--CEEEEEEECSSCTTSSSCHHHHHHHH
T ss_pred ------Cccc-------------------CCchhhhhHHHHHHHHHHhcCCC--CCEEEEEeeccccccccCccHHHHHH
Confidence 0111 01122567777788777666654 69999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchh-hhhccCc
Q 001947 655 SMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQM-ASACGEA 701 (992)
Q Consensus 655 ~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~-~~~~Gg~ 701 (992)
++.|++.++++++++++++++|.++|....|.++| |++ +|+|||.
T Consensus 101 ~l~aln~l~~~~ls~~~l~~~A~~~e~~~~g~~~g--ddv~~~~~GG~ 146 (163)
T d1h72c1 101 TAYAINELFKLNLDKLKLVDYASYGELASSGAKHA--DNVAPAIFGGF 146 (163)
T ss_dssp HHHHHHHHTTCCCCHHHHHHHHHHHHHHHHSSCCC--TTHHHHHHCSE
T ss_pred HHHHHHHHhCCCCCHHHHHHHHHHHHHhhcCCCCc--hHhHHHhhCCE
Confidence 99999999999999999999999999999999888 665 6889995
No 20
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=99.52 E-value=3.3e-15 Score=141.81 Aligned_cols=89 Identities=22% Similarity=0.320 Sum_probs=70.8
Q ss_pred cccchhhhHHHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccceeec
Q 001947 848 CHPIYENFRVKAFKALLTAAASDDQLTSLGELLYQCHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITG 927 (992)
Q Consensus 848 ~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltG 927 (992)
.+++.+..++. .++|+.+ |++.||+||+++|.+++++|||+|++|.|++.+++ .| +||||||
T Consensus 39 ~~i~~~~~~~~--~~al~~~----d~~~lg~lm~~~~~~l~~lgvs~~~id~l~~~~~~-----------~g-~GaKitG 100 (137)
T d1kkha2 39 DEIFKEIDKVI--DEALKIK----NKEDFGKLMTKNHELLKKLNISTPKLDRIVDIGNR-----------FG-FGAKLTG 100 (137)
T ss_dssp HHHHHHHHHHH--HHHHHCC----SHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHHHHH-----------HS-SEEEECS
T ss_pred hHHHHHHHHHH--HHHHHcC----CHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHh-----------cC-CCccccc
Confidence 34455544443 3567776 99999999999999999999999999999999987 46 7999999
Q ss_pred cccCceEEEEccCCcccHHHHHHHHHHH
Q 001947 928 GGSGGTICVIGRNSLRSSEQVLEIQQRY 955 (992)
Q Consensus 928 aG~GG~vi~l~~~~~~~~~~~~~i~~~y 955 (992)
||+|||+++++++.. .+++++++.++|
T Consensus 101 AGgGG~~ial~~~~~-~~~~~~~l~~~~ 127 (137)
T d1kkha2 101 AGGGGCVIILVNEEK-EKELLKELNKED 127 (137)
T ss_dssp SSSSEEEEEECCGGG-HHHHHHHHHTSS
T ss_pred CCCCcEEEEEeChhh-HHHHHHHHHHcC
Confidence 999999999987644 355666665433
No 21
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]}
Probab=99.40 E-value=1.3e-13 Score=131.31 Aligned_cols=87 Identities=15% Similarity=0.120 Sum_probs=72.2
Q ss_pred HHHHHHHHhccCChhHHHHHHHHHHHhhhhhhhc--CCCCchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceE
Q 001947 857 VKAFKALLTAAASDDQLTSLGELLYQCHYSYSAC--GLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTI 934 (992)
Q Consensus 857 v~~~~~~l~~~~~~~d~~~lG~lm~~sH~slr~~--~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~v 934 (992)
|.++.++|+++ |++.||++|+++|..++.+ ++++|++|.|++++++ .| .++|+||||+|||+
T Consensus 42 v~~~~~al~~~----d~~~l~~~m~~~~~ll~~l~~~i~~~~l~~l~~~a~~-----------~g-~~ak~~GaGgGG~~ 105 (135)
T d1k47a2 42 VVSLVEALEQG----KSEKIIEQVEVASKLLEGLSTDIYTPLLRQLKEASQD-----------LQ-AVAKSSGAGGGDCG 105 (135)
T ss_dssp HHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHCTTTSCHHHHHHHHTTTT-----------SS-EEEEECSSCSSSEE
T ss_pred HHHHHHHHHhC----CHHHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHH-----------hc-cchhcccCcCCCeE
Confidence 66788899986 9999999999999999996 5689999999998875 56 58999999999999
Q ss_pred EEEccCCcccHHHHHHHHHHHHhhcCCCCe
Q 001947 935 CVIGRNSLRSSEQVLEIQQRYKDATGYLPL 964 (992)
Q Consensus 935 i~l~~~~~~~~~~~~~i~~~y~~~~g~~~~ 964 (992)
++|.++. +..+.|.+++. +.|+++.
T Consensus 106 i~l~~~~----~~~~~i~~~~~-~~Gi~~~ 130 (135)
T d1k47a2 106 IALSFDA----QSTKTLKNRWA-DLGIELL 130 (135)
T ss_dssp EEEECSH----HHHHHHHHHHH-HTTCEEE
T ss_pred EEEecCh----hhHHHHHHHHH-HCCCHhh
Confidence 9998643 34567777776 5677663
No 22
>d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]}
Probab=98.76 E-value=3.1e-07 Score=99.57 Aligned_cols=134 Identities=19% Similarity=0.199 Sum_probs=92.6
Q ss_pred ChHHHHHHhCCCCCCcEEEEEcCCCCCh---hhHHHhh---CC--CCcE-EEEeCCCCCC----------CCCCeEEcCC
Q 001947 209 SRKEVRKELGIEDDVKLLILNFGGQPAG---WKLKEEY---LP--SGWK-CLVCGASDSQ----------LPPNFIKLPK 269 (992)
Q Consensus 209 ~r~e~r~~l~~~~d~~~Vlvs~Gg~~~~---~~ll~~l---~~--~~~~-~Vv~G~~~~~----------l~~nv~v~~f 269 (992)
.++..+..++++.+++ ++++.|..... ..+++.+ .. .+.. +++.|..... ...++++.++
T Consensus 181 ~~~~~r~~~~~~~~~~-~i~~~gr~~~~Kg~~~li~a~~~l~~~~~~~~~~ii~g~~~~~~~~~~~~~~~~~~~v~~~g~ 259 (370)
T d2iw1a1 181 SREIYRQKNGIKEQQN-LLLQVGSDFGRKGVDRSIEALASLPESLRHNTLLFVVGQDKPRKFEALAEKLGVRSNVHFFSG 259 (370)
T ss_dssp HHHHHHHHTTCCTTCE-EEEEECSCTTTTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCHHHHHHHHHHTCGGGEEEESC
T ss_pred hhhhhhhccCCCccce-EEEEEeccccccchhhhcccccccccccccceeeecccccccccccccccccccccccccccc
Confidence 3456788888876665 56677776653 2344432 11 1223 3344433321 3567888898
Q ss_pred CCCHHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEe-cCCCChhhHHHHHH
Q 001947 270 DAYTPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMI-RRDLLTGHWKPYLE 344 (992)
Q Consensus 270 ~~~~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~-~~~~~~~~l~~al~ 344 (992)
.++++++|++||++|..+ -.+++.|||++|+|+|+.+.++..|. +.+.+.|..+. ..+ ++.|.++|.
T Consensus 260 ~~~~~~~~~~adv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~------i~~~~~G~l~~~~~d--~~~la~~i~ 331 (370)
T d2iw1a1 260 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHY------IADANCGTVIAEPFS--QEQLNEVLR 331 (370)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHH------HHHHTCEEEECSSCC--HHHHHHHHH
T ss_pred ccccccccccccccccccccccccceeeecccCCeeEEEeCCCChHHH------hcCCCceEEEcCCCC--HHHHHHHHH
Confidence 889999999999999643 34789999999999999886655544 77778887664 333 588999999
Q ss_pred HHhhCCC
Q 001947 345 RAISLKP 351 (992)
Q Consensus 345 ~ll~~~~ 351 (992)
++++++.
T Consensus 332 ~ll~d~~ 338 (370)
T d2iw1a1 332 KALTQSP 338 (370)
T ss_dssp HHHHCHH
T ss_pred HHHcCHH
Confidence 9998653
No 23
>d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=98.76 E-value=3.1e-07 Score=102.72 Aligned_cols=128 Identities=13% Similarity=0.130 Sum_probs=83.2
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCC---hh-hHHHh---hC----CCCcEEEEeCCCCCC-----------CCCCeEEcCC
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPA---GW-KLKEE---YL----PSGWKCLVCGASDSQ-----------LPPNFIKLPK 269 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~---~~-~ll~~---l~----~~~~~~Vv~G~~~~~-----------l~~nv~v~~f 269 (992)
..++.+++.+ + .+++..|+... +. .++++ +. .+++.+++.|...+. .+.++.+.++
T Consensus 239 ~~~~~~~~~~-~-~~i~~~G~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T d2bisa1 239 SLLSKFGMDE-G-VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEM 316 (437)
T ss_dssp HHHHHTTCCS-C-EEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHTCTTEEEECSC
T ss_pred hhhhhhhccC-C-ceEEEeecccccchhHHHHHhhhcccccccccccceeeeecccccccccchhhhccccccceecccc
Confidence 4556677543 3 45566676543 22 23332 21 145788888876531 2444556665
Q ss_pred CC--CHHHHHhhcCEEEec----CChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHH
Q 001947 270 DA--YTPDFMAASDCMLGK----IGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYL 343 (992)
Q Consensus 270 ~~--~~p~lL~aaDlvIt~----~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al 343 (992)
.+ .++.++.+||+++.. +..+++.|||++|+|+|+.+.++ ..+.++ .+.|..++..+ ++.|.++|
T Consensus 317 ~~~~~~~~~~~~adi~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~------~~e~i~-~~~G~~~~~~d--~~~la~~i 387 (437)
T d2bisa1 317 LSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGG------LRDIIT-NETGILVKAGD--PGELANAI 387 (437)
T ss_dssp CCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHTTTCEEEEESCTT------HHHHCC-TTTCEEECTTC--HHHHHHHH
T ss_pred CcHHHHHHHHhhhccccccccccccchHHHHHHHCCCCEEEeCCCC------cHHhEE-CCcEEEECCCC--HHHHHHHH
Confidence 54 367899999999964 33469999999999999976432 223333 46788887665 58899999
Q ss_pred HHHhhCC
Q 001947 344 ERAISLK 350 (992)
Q Consensus 344 ~~ll~~~ 350 (992)
.+++++.
T Consensus 388 ~~ll~~~ 394 (437)
T d2bisa1 388 LKALELS 394 (437)
T ss_dssp HHHHTTT
T ss_pred HHHHhCC
Confidence 9998744
No 24
>d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]}
Probab=98.51 E-value=9.9e-08 Score=109.24 Aligned_cols=136 Identities=18% Similarity=0.086 Sum_probs=88.6
Q ss_pred HHHHHHhCCCCCCcEEEEEcCCCCCh--hh-HHHh---hCCCCcEEEEeCCCCCC-----------CCCCeEEcCCCC--
Q 001947 211 KEVRKELGIEDDVKLLILNFGGQPAG--WK-LKEE---YLPSGWKCLVCGASDSQ-----------LPPNFIKLPKDA-- 271 (992)
Q Consensus 211 ~e~r~~l~~~~d~~~Vlvs~Gg~~~~--~~-ll~~---l~~~~~~~Vv~G~~~~~-----------l~~nv~v~~f~~-- 271 (992)
.+++...+++.++..++++.|..... .+ ++++ +...+.++++.|.+... ++.++.+.+..+
T Consensus 278 ~~~~~~~~~~~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~~~~~l~~~G~G~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 357 (477)
T d1rzua_ 278 KAVAEHFRIDDDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEP 357 (477)
T ss_dssp HHHHHHHTCCCSSSCEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHH
T ss_pred HHHHHhcccccCCccEEEEEeeeeecCCcHHHHHHHHHHHhhCCeEEEEecCCchHHHHHHHHHhhcCCeEEEEcccChh
Confidence 34566677766655566788877653 22 2332 23346677777765421 477887765443
Q ss_pred CHHHHHhhcCEEEecC---Ch-hHHHHHHHcCCcEEEEeCCCCCCh---HHHHHHHHHcCcEEEEecCCCChhhHHHHHH
Q 001947 272 YTPDFMAASDCMLGKI---GY-GTVSEALAYKLPFVFVRRDYFNEE---PFLRNMLEFYQGGVEMIRRDLLTGHWKPYLE 344 (992)
Q Consensus 272 ~~p~lL~aaDlvIt~~---G~-~Tv~Eal~~GvP~V~iP~~~~~EQ---~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~ 344 (992)
..+.++++||++|..+ |+ .+++|||++|+|+|+....+..|. ..+...+...+.|..++..+ ++.|.++|.
T Consensus 358 ~~~~~~~~aD~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d--~~~la~ai~ 435 (477)
T d1rzua_ 358 LSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVT--LDGLKQAIR 435 (477)
T ss_dssp HHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCS--HHHHHHHHH
T ss_pred HHHHHHHhCccccCCccccCCCHHHHHHHHcCCCEEEcCCCCCcceeecCCccccccCCCceEEeCCCC--HHHHHHHHH
Confidence 2336789999999866 22 589999999999999864433322 12233344556898888766 578999998
Q ss_pred HHhh
Q 001947 345 RAIS 348 (992)
Q Consensus 345 ~ll~ 348 (992)
++++
T Consensus 436 ~~l~ 439 (477)
T d1rzua_ 436 RTVR 439 (477)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8775
No 25
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=98.22 E-value=2.6e-06 Score=80.60 Aligned_cols=77 Identities=18% Similarity=0.275 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCC
Q 001947 609 AAYVAGTILVLMTELGVRFEDSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPC 688 (992)
Q Consensus 609 ~nyv~~~i~~~~~~~g~~~~~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~ 688 (992)
.|.++.++..+.++.+.. .+++|.|..+||.++|||++||-.++++.+++.+++.+++ +.++|.++ |
T Consensus 57 ~Nlv~ka~~~l~~~~~~~--~~~~I~i~K~IP~~aGLGGGSsnAAa~l~~l~~~~~~~~~---l~~la~~i-----G--- 123 (148)
T d1ueka1 57 ENLAYRAASLYLEAAGQP--GGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPAEVD---LFALARTL-----G--- 123 (148)
T ss_dssp GSHHHHHHHHHHHHTTCC--CEEEEEEECCSCSSSSSCHHHHHHHHHHHHHHHHSCSCCC---HHHHHHHH-----C---
T ss_pred cchhhhhhhhhHHhcCCC--ceEEEEEEeeEEEeeeccCCchhhhhHHHHHHHhhhhhhH---HHHhhccc-----C---
Confidence 578888888666666654 6899999999999999999999999999999999987765 45555542 3
Q ss_pred CccchhhhhccC
Q 001947 689 GVMDQMASACGE 700 (992)
Q Consensus 689 G~~D~~~~~~Gg 700 (992)
.|--.++.|+
T Consensus 124 --sDVPffl~~~ 133 (148)
T d1ueka1 124 --ADVPFFLLGR 133 (148)
T ss_dssp --TTHHHHHHCS
T ss_pred --CCchhhccCC
Confidence 4876777777
No 26
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=98.13 E-value=7.4e-06 Score=78.91 Aligned_cols=63 Identities=17% Similarity=0.257 Sum_probs=56.5
Q ss_pred CCEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 629 DSISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 629 ~g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
.+++|.|+.+||.++|||+.+|=+++++.+++.+++.+++.+++.++|..+ | .|--.++.|+.
T Consensus 88 ~~~~I~i~KnIP~gaGLGGGSsnAAa~L~~l~~~~~~~l~~~~l~~ia~~i---------G-sDvpffl~~~~ 150 (163)
T d1oj4a1 88 SGANISIDKRLPMGGGLGGGSSNAATVLVALNHLWQCGLSMDELAEMGLTL---------G-ADVPVFVRGHA 150 (163)
T ss_dssp CEEEEEEECCSCSSTTSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHGGG---------C-TTHHHHHHCBC
T ss_pred CceEEEEEeeeeecccccCCCchHHHHHHHhhcccccCCCHHHHHHHHHHc---------C-CcccccccCCC
Confidence 689999999999999999999999999999999999999999999998543 3 48778888873
No 27
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=98.07 E-value=4.8e-05 Score=83.62 Aligned_cols=318 Identities=14% Similarity=0.015 Sum_probs=154.5
Q ss_pred ccEEEEEeccCCCcccHHHHHHHHHHHHHC-CCcEEEEeCCCCcccccccCCCceeeeeecccCCcccccccccChHHHH
Q 001947 14 KHLVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDFVFTSEIQSPRLFIRKVLLDCGAVQADALTVDRLASL 92 (992)
Q Consensus 14 ~~~~Il~~v~g~G~GHv~r~laLA~~L~~~-GheV~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 92 (992)
++|||++++ | .-.-.....+|.++|++. +.++.++..+.+......+. ..+.+.+ ..+..+. .+. .++
T Consensus 1 ~k~Ki~~v~-G-tR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~-~~~~i~~-~~~~~~~------~~~-~~~ 69 (377)
T d1o6ca_ 1 KKLKVMTVF-G-TRPEAIKMAPLVLELKKYPEIDSYVTVTAQHRQMLDQVL-DAFHIKP-DFDLNIM------KER-QTL 69 (377)
T ss_dssp CCEEEEEEE-C-SHHHHHHHHHHHHHGGGCTTEEEEEEECCSCGGGTHHHH-HHTTCCC-SEECCCC------CTT-CCH
T ss_pred CCceEEEEE-E-chHhHHHHHHHHHHHHhCCCCCEEEEEeCCCHHHHHHHH-hhcCCCC-ceeeecC------CCC-CCH
Confidence 578887754 2 256677888999999886 45776654443221111000 0001101 0011110 010 011
Q ss_pred HHHHHHhhccHHHhHHHHHHHHHcCCCcEEEE--CC--CchHHHHHHHcCCcEEEEe----cCch-----hHHHHHHHhh
Q 001947 93 EKYSETAVAPRKSILKDEVEWLNSIKADLVVS--DV--VPVACRAAADAGIRSVCVT----NFSW-----DFIYAEYVMA 159 (992)
Q Consensus 93 ~~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVs--D~--~~~a~~aA~~~gIP~v~is----~~~~-----~~~~~~~~~~ 159 (992)
.. .....+....+.+++.+||+|+. |. ..+++.+|...+||++.+. .+.| +...++.+..
T Consensus 70 ~~-------~~~~~i~~~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s~~~~~~~~de~~R~~isk 142 (377)
T d1o6ca_ 70 AE-------ITSNALVRLDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRTGNKYSPFPEELNRQMTGA 142 (377)
T ss_dssp HH-------HHHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCCSCTTTTTTHHHHHHHHHH
T ss_pred HH-------HHHHHHHhhhhhhhhcccceeEeeecccccchhhhhhhhccceEEEEecccccccccccCchhhhcccccc
Confidence 11 11224455567889999999885 54 4456788899999999882 2222 2334433221
Q ss_pred hcc-c---hHHHHHHHHhhccccceeeecCCCCCCCCCCceeecCcccc-cCCCChHHHHHHhCCCCCCcEEEEEcCCCC
Q 001947 160 AGH-H---HRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVR-RLHKSRKEVRKELGIEDDVKLLILNFGGQP 234 (992)
Q Consensus 160 ~~~-~---~~~i~~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~-~~~~~r~e~r~~l~~~~d~~~Vlvs~Gg~~ 234 (992)
..+ + .....+.+....-....++ +++.|.+.. .....+......+......+.+++++-...
T Consensus 143 ls~~hf~~t~~~~~~L~~~G~~~~~I~-------------~vG~~~~D~i~~~~~~~~~~~~~~~~~~~~~ilvt~Hr~~ 209 (377)
T d1o6ca_ 143 IADLHFAPTGQAKDNLLKENKKADSIF-------------VTGNTAIDALNTTVRDGYSHPVLDQVGEDKMILLTAHRRE 209 (377)
T ss_dssp HCSEEEESSHHHHHHHHHTTCCGGGEE-------------ECCCHHHHHHHHHCCSSCCCSTTTTTTTSEEEEECC----
T ss_pred ceeEEeecchhhhhhhhhhccccceEe-------------eccchhHHHHHHHHHHHHhhhhhhhccCCceEEEEecccc
Confidence 100 0 1112222222221111111 112221110 000000000011222235567888775433
Q ss_pred Ch----hhHHH----hhC-CCCcEEEEeCCCCCC----------CCCCeEEcCCCCCHH--HHHhhcCEEEecCChhHHH
Q 001947 235 AG----WKLKE----EYL-PSGWKCLVCGASDSQ----------LPPNFIKLPKDAYTP--DFMAASDCMLGKIGYGTVS 293 (992)
Q Consensus 235 ~~----~~ll~----~l~-~~~~~~Vv~G~~~~~----------l~~nv~v~~f~~~~p--~lL~aaDlvIt~~G~~Tv~ 293 (992)
.. ...+. .+. .....+++....... ..+|+.+++...+.. .+|..|+++||.+| +..-
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~llk~s~~vIgnSs-s~i~ 288 (377)
T d1o6ca_ 210 NLGEPMENMFKAIRRIVGEFEDVQVVYPVHLNPVVREAAHKHFGDSDRVHLIEPLEVIDFHNFAAKSHFILTDSG-GVQE 288 (377)
T ss_dssp ------HHHHHHHHHHHHHCTTEEEEEC----CHHHHHHHHC--CCSSEEECCCCCHHHHHHHHHHCSEEEEC---CHHH
T ss_pred ccccchHHHHHHHHhhcccccccccccccccccccchhhhhccccccceEeccccchHHHHHHHhhhheeecccc-hhHH
Confidence 21 11111 111 233444444322211 367898886555332 67899999999999 5588
Q ss_pred HHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC---------ccCCCCHHHHHH
Q 001947 294 EALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC---------YEGGINGGEVAA 364 (992)
Q Consensus 294 Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~---------~~~~~~G~~~aA 364 (992)
||.++|+|+|.+.. ..|++. -.+.|.-+.+.. .++.+..++.++++++.. .-.+++.+++++
T Consensus 289 Ea~~lg~P~Inir~--~tERqe----~~~~g~nilv~~---~~~~I~~~i~~~l~~~~~~~~~~~~~npYGdG~as~rI~ 359 (377)
T d1o6ca_ 289 EAPSLGKPVLVLRD--TTERPE----GVEAGTLKLAGT---DEENIYQLAKQLLTDPDEYKKMSQASNPYGDGEASRRIV 359 (377)
T ss_dssp HGGGGTCCEEEECS--CCC-------CTTTTSSEEECS---CHHHHHHHHHHHHHCHHHHHHHHHCCCTTCCSCHHHHHH
T ss_pred hhhhhhceEEEeCC--CCcCcc----hhhcCeeEECCC---CHHHHHHHHHHHHhChHHHhhhccCCCCCCCChHHHHHH
Confidence 99999999999963 334422 123455555543 356778888888765422 125677899999
Q ss_pred HHHHHHHc
Q 001947 365 HILQETAI 372 (992)
Q Consensus 365 ~~I~~~~~ 372 (992)
+.|....-
T Consensus 360 ~~L~~~~~ 367 (377)
T d1o6ca_ 360 EELLFHYG 367 (377)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhhC
Confidence 99987653
No 28
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=97.75 E-value=2e-05 Score=73.15 Aligned_cols=103 Identities=12% Similarity=0.094 Sum_probs=73.6
Q ss_pred ccccchhhhHHHHHHHHHhccCChhHHHHHHHHH-HH-hhhhhhhcCCCCchHHHHHHHHHHHhhhccccCCCCCcccce
Q 001947 847 VCHPIYENFRVKAFKALLTAAASDDQLTSLGELL-YQ-CHYSYSACGLGSDGTDRLVQLVQEIQHSKVSKSKDGTLFGAK 924 (992)
Q Consensus 847 ~~h~v~E~~Rv~~~~~~l~~~~~~~d~~~lG~lm-~~-sH~slr~~~vs~~~lD~lv~~a~~~~~~~~~~~~~~g~~Gak 924 (992)
..+++....|+..+..+|.++ |++.+++.| ++ -|+.+|.- ..|+++.+.+.+ + .|++|+-
T Consensus 29 ~~dav~n~~~~~~lv~al~~~----d~~l~~~~~~~D~l~Ep~r~~--l~P~~~~ik~~l-~-----------~ga~~~~ 90 (133)
T d1h72c2 29 LKDLVNNVGKACGMVYALYNK----DKSLFGRYMMSDKVIEPVRGK--LIPNYFKIKEEV-K-----------DKVYGIT 90 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT----CHHHHHHHHTTCCSSHHHHHT--TSTTHHHHHHHH-T-----------TTEEEEE
T ss_pred HHHHHHhhhhhHHHHHHHhcc----CHHHHHHHHhcCcccCceecc--cCCchHHHHHHh-h-----------cCceEEE
Confidence 345677788999999999886 999998755 44 59999996 689999987743 3 5899999
Q ss_pred eeccccCceEEEEccCCcccHHHHHHHHHHHHhhcCCCCeEEeecCCCCcee
Q 001947 925 ITGGGSGGTICVIGRNSLRSSEQVLEIQQRYKDATGYLPLIIEGSSPGAGKF 976 (992)
Q Consensus 925 ltGaG~GG~vi~l~~~~~~~~~~~~~i~~~y~~~~g~~~~~~~~~~~Ga~~~ 976 (992)
|||+| .||+++++++ +++.+.+.+++.|+ -.+-...+.|++++
T Consensus 91 lSGSG--PTv~al~~~~-~~~~~~~~l~~~~~------~~~~~~~~~G~~Vv 133 (133)
T d1h72c2 91 ISGSG--PSIIAFPKEE-FIDEVENILRDYYE------NTIRTEVGKGVEVV 133 (133)
T ss_dssp ECTTS--SCEEEEECGG-GHHHHHHHHHHHCS------CEEEECBCCCCEEC
T ss_pred EeCCC--CcEEEEeChH-HHHHHHHHHHHHHh------hCEEecCCCCcEEC
Confidence 99998 9999888654 33455555554432 12222257777653
No 29
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=97.72 E-value=0.00031 Score=76.78 Aligned_cols=142 Identities=15% Similarity=-0.012 Sum_probs=89.2
Q ss_pred CCCcEEEEEcCCCCCh---hhH---HHhh--CCCCcEEEEeCCCCCC----------CCCCeEEcCCCCCHH--HHHhhc
Q 001947 221 DDVKLLILNFGGQPAG---WKL---KEEY--LPSGWKCLVCGASDSQ----------LPPNFIKLPKDAYTP--DFMAAS 280 (992)
Q Consensus 221 ~d~~~Vlvs~Gg~~~~---~~l---l~~l--~~~~~~~Vv~G~~~~~----------l~~nv~v~~f~~~~p--~lL~aa 280 (992)
...+++++++-..... ..+ +..+ ....+.+++....... ..+|+.+++...+.. .+|..|
T Consensus 193 ~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s 272 (373)
T d1v4va_ 193 PEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNPVVREAVFPVLKGVRNFVLLDPLEYGSMAALMRAS 272 (373)
T ss_dssp CSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHTE
T ss_pred ccccceeEEeccccccchHHHHHHHHHHHhhhcccceeeeeecccccchhhhhhhhcccccceeeccchHHHHHHHhhhc
Confidence 4567888888754432 111 1112 1234455544332211 256888776544322 578999
Q ss_pred CEEEecCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCCc-------
Q 001947 281 DCMLGKIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPCY------- 353 (992)
Q Consensus 281 DlvIt~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~~------- 353 (992)
+++||.+| +...||.++|+|+|.++.. .|.+.- + +.|.-+.+.. .++.+..++..++.++..+
T Consensus 273 ~~vignSs-sgi~Ea~~lg~P~Inir~~--~eRqeg---~-~~g~nvlv~~---d~~~I~~~i~~~l~~~~~~~~~~~~~ 342 (373)
T d1v4va_ 273 LLLVTDSG-GLQEEGAALGVPVVVLRNV--TERPEG---L-KAGILKLAGT---DPEGVYRVVKGLLENPEELSRMRKAK 342 (373)
T ss_dssp EEEEESCH-HHHHHHHHTTCCEEECSSS--CSCHHH---H-HHTSEEECCS---CHHHHHHHHHHHHTCHHHHHHHHHSC
T ss_pred eeEecccc-hhhhcchhhcCcEEEeCCC--ccCHHH---H-hcCeeEEcCC---CHHHHHHHHHHHHcCHHHHhhcccCC
Confidence 99999988 7888999999999998632 233221 2 3465554433 3578888888887654321
Q ss_pred --cCCCCHHHHHHHHHHHHHc
Q 001947 354 --EGGINGGEVAAHILQETAI 372 (992)
Q Consensus 354 --~~~~~G~~~aA~~I~~~~~ 372 (992)
..+++.++++++.|.+.+.
T Consensus 343 npYGdG~as~rI~~~L~~~~~ 363 (373)
T d1v4va_ 343 NPYGDGKAGLMVARGVAWRLG 363 (373)
T ss_dssp CSSCCSCHHHHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHhC
Confidence 2678899999999998763
No 30
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=97.38 E-value=0.00086 Score=73.20 Aligned_cols=312 Identities=13% Similarity=0.020 Sum_probs=159.4
Q ss_pred EEEEEeccCCCcccHHHHHHHHHHHHHC-CCcEEEEeCCCCccc-ccccCCCceeeeeecccCCcccccccccChHHHHH
Q 001947 16 LVFAYYVTGHGFGHATRVVEVVRNLISA-GHDVHVVTGAPDFVF-TSEIQSPRLFIRKVLLDCGAVQADALTVDRLASLE 93 (992)
Q Consensus 16 ~~Il~~v~g~G~GHv~r~laLA~~L~~~-GheV~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 93 (992)
|||++++ | .-.-...+.+|.++|++. +.++.++..+.++.. ...+.. +.+.+ ..+..... .. ......
T Consensus 1 MKi~~v~-G-tR~e~~kl~pli~~l~~~~~~~~~li~tG~H~~~~~~~~~~--~~~~~-~~~~~~~~-~~--~~~~~~-- 70 (376)
T d1f6da_ 1 MKVLTVF-G-TRPEAIKMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKL--FSIVP-DYDLNIMQ-PG--QGLTEI-- 70 (376)
T ss_dssp CEEEEEE-C-SHHHHHHHHHHHHHHHHCTTCEEEEEECCTTGGGGHHHHHH--TTCCC-SEECCCCS-SS--SCHHHH--
T ss_pred CeEEEEE-E-hhHhHHHHHHHHHHHHhCCCCCEEEEEcCCCHHHHHHHHHh--cCCCC-CcccccCC-CC--CCHHHH--
Confidence 4555443 2 256677888999999886 578877655443211 111100 00000 00111100 00 011111
Q ss_pred HHHHHhhccHHHhHHHHHHHHHcCCCcEEEE--CC--CchHHHHHHHcCCcEEEEe----cCch-----hHHHHHHHhhh
Q 001947 94 KYSETAVAPRKSILKDEVEWLNSIKADLVVS--DV--VPVACRAAADAGIRSVCVT----NFSW-----DFIYAEYVMAA 160 (992)
Q Consensus 94 ~~~~~~~~~~~~~l~~~~~~L~~~kPDlVVs--D~--~~~a~~aA~~~gIP~v~is----~~~~-----~~~~~~~~~~~ 160 (992)
....+....+.+.+.+||+|++ |. ..+++.+|...+||++.+. .... +...|+.+...
T Consensus 71 ---------~~~~i~~~~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~~~~~pde~~R~~iskl 141 (376)
T d1f6da_ 71 ---------TCRILEGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHL 141 (376)
T ss_dssp ---------HHHHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCTTSSTTHHHHHHHHHHT
T ss_pred ---------HHHHHHhhHHHHHhccCcceeeeccccchhhHHHHHHhhCceEEEEecccccccccccCchhhhhhhhccc
Confidence 1123445566788999999885 54 4456677888999999882 1221 23344332211
Q ss_pred cc-c---hHHHHHHHHhhccccceeeecCCCCCCCCCCceeecCcccc-----cCCCChHH-----HHHHhCCCCCCcEE
Q 001947 161 GH-H---HRSIVWQIAEDYSHCEFLIRLPGYCPMPAFRDVIDVPLVVR-----RLHKSRKE-----VRKELGIEDDVKLL 226 (992)
Q Consensus 161 ~~-~---~~~i~~~l~~~y~~~d~ll~~~~~~~~p~~~~v~~vp~~~~-----~~~~~r~e-----~r~~l~~~~d~~~V 226 (992)
.+ + .+...+.+....-.... ..+++-|.+.. ........ .........+.++|
T Consensus 142 s~~hf~~~~~~~~~L~~~G~~~~~-------------I~~vG~~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (376)
T d1f6da_ 142 AMYHFSPTETSRQNLLRENVADSR-------------IFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMI 208 (376)
T ss_dssp CSEEEESSHHHHHHHHHTTCCGGG-------------EEECCCHHHHHHHHHHHHTTTCHHHHHHHHTTCTTCCTTSEEE
T ss_pred eeEEEeccHHHHhHHHhcCCCccc-------------cceecCchHHHHHHHHhhhhccchhhhhhhccccccCCCCceE
Confidence 00 0 01112222222111111 11222222210 00001111 11122344567899
Q ss_pred EEEcCCCCCh----hhHHH---hhC--CCCcEEEEeCCCCCC----------CCCCeEEcCCCCCHH--HHHhhcCEEEe
Q 001947 227 ILNFGGQPAG----WKLKE---EYL--PSGWKCLVCGASDSQ----------LPPNFIKLPKDAYTP--DFMAASDCMLG 285 (992)
Q Consensus 227 lvs~Gg~~~~----~~ll~---~l~--~~~~~~Vv~G~~~~~----------l~~nv~v~~f~~~~p--~lL~aaDlvIt 285 (992)
++++=..... ..+.. .+. ...+.++.+...... ..+|+.+++-..+.. .+|..|+++||
T Consensus 209 lvt~H~~~~~~~~~~~i~~~l~~~~~~~~~~~ii~p~~~~~~~~~~~~~~~~~~~ni~~~~~l~~~~fl~ll~~a~~vig 288 (376)
T d1f6da_ 209 LVTGHRRESFGRGFEEICHALADIATTHQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLILT 288 (376)
T ss_dssp EECCCCBSSCCHHHHHHHHHHHHHHHHCTTEEEEEECCBCHHHHHHHHHHHTTCTTEEEECCCCHHHHHHHHHHCSEEEE
T ss_pred EEecccchhhhhhHHHHHHHHhhhhhhcceeEEecccccchhhhhhHhhhhcccccceeeccccHHHHHHHHhhceEEEe
Confidence 9988644331 11222 221 234455555332211 257888876554432 67899999999
Q ss_pred cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHHHHHHHhhCCCC---------ccCC
Q 001947 286 KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKPYLERAISLKPC---------YEGG 356 (992)
Q Consensus 286 ~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~al~~ll~~~~~---------~~~~ 356 (992)
.+| +..-||.++|+|+|.+. ...||+. .+ +.|.-+.+.. ..+.+..++.++++++.. ...+
T Consensus 289 nSs-sgi~Ea~~lg~P~Inir--~~ter~~---~~-~~g~~i~v~~---~~~~I~~ai~~~l~~~~~~~~~~~~~npYGd 358 (376)
T d1f6da_ 289 DSG-GIQEEAPSLGKPVLVMR--DTTERPE---AV-TAGTVRLVGT---DKQRIVEEVTRLLKDENEYQAMSRAHNPYGD 358 (376)
T ss_dssp SSS-GGGGTGGGGTCCEEECS--SCCSCHH---HH-HHTSEEECCS---SHHHHHHHHHHHHHCHHHHHHHHHSCCTTCC
T ss_pred cCc-chHhhHHHhCCCEEEcC--CCccCcc---ce-ecCeeEECCC---CHHHHHHHHHHHHhChHhhhhhccCCCCCCC
Confidence 999 67889999999999885 3456643 23 3455555443 357788888888764421 1256
Q ss_pred CCHHHHHHHHHHH
Q 001947 357 INGGEVAAHILQE 369 (992)
Q Consensus 357 ~~G~~~aA~~I~~ 369 (992)
++.+++++++|+.
T Consensus 359 G~as~rI~~iLk~ 371 (376)
T d1f6da_ 359 GQACSRILEALKN 371 (376)
T ss_dssp SCHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHh
Confidence 7888998888875
No 31
>d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]}
Probab=97.32 E-value=0.0007 Score=66.52 Aligned_cols=129 Identities=13% Similarity=0.142 Sum_probs=84.3
Q ss_pred hHHHHHHhCCCCCCcEEEEEcCCCCC---hh-hHHHh---hCC----CCcEEEEeCCCCCC-----------CCCCeEEc
Q 001947 210 RKEVRKELGIEDDVKLLILNFGGQPA---GW-KLKEE---YLP----SGWKCLVCGASDSQ-----------LPPNFIKL 267 (992)
Q Consensus 210 r~e~r~~l~~~~d~~~Vlvs~Gg~~~---~~-~ll~~---l~~----~~~~~Vv~G~~~~~-----------l~~nv~v~ 267 (992)
+.++++.++++ +++ +++..|.... +. .+++. +.. +++.++++|.+.+. .+..+.+.
T Consensus 20 ~~~~~~~~~l~-~~~-~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~~l~i~G~g~~~~~~~~~~~~~~~~~~~~~~ 97 (196)
T d2bfwa1 20 KKSLLSKFGMD-EGV-TFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVIT 97 (196)
T ss_dssp HHHHHHHTTCC-SCE-EEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCHHHHHHHHHHHHHCTTEEEEC
T ss_pred HHHHHHHhCCC-CCC-EEEEEcCCCccccCHHHHHHHHHhhhcccCCCCeEEEEEeecccchhhhhhhhhhccceeEEee
Confidence 34678889985 444 3556776653 22 23432 321 45788888876431 23334455
Q ss_pred CCCC--CHHHHHhhcCEEEe----cCChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCChhhHHH
Q 001947 268 PKDA--YTPDFMAASDCMLG----KIGYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLLTGHWKP 341 (992)
Q Consensus 268 ~f~~--~~p~lL~aaDlvIt----~~G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~~~~l~~ 341 (992)
++.+ .++.+|..||++|. .+-.+++.|||+||+|+|+...+ .....+ ..+.|..++..+ ++.|.+
T Consensus 98 ~~~~~~~l~~~~~~~di~v~ps~~e~~~~~~~Eam~~G~pvI~~~~~------~~~e~i-~~~~g~~~~~~~--~~~l~~ 168 (196)
T d2bfwa1 98 EMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVG------GLRDII-TNETGILVKAGD--PGELAN 168 (196)
T ss_dssp SCCCHHHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTCEEEEESCH------HHHHHC-CTTTCEEECTTC--HHHHHH
T ss_pred eccccccchhccccccccccccccccccccchhhhhcCceeeecCCC------ccceee-cCCceeeECCCC--HHHHHH
Confidence 5554 46689999999995 23346999999999999997532 233333 457888887655 578999
Q ss_pred HHHHHhhC
Q 001947 342 YLERAISL 349 (992)
Q Consensus 342 al~~ll~~ 349 (992)
+|.+++..
T Consensus 169 ~i~~~l~~ 176 (196)
T d2bfwa1 169 AILKALEL 176 (196)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhC
Confidence 99998863
No 32
>d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=97.14 E-value=0.00043 Score=66.24 Aligned_cols=82 Identities=15% Similarity=-0.004 Sum_probs=62.9
Q ss_pred CCCeEEcCCCCC--HHHHHhhcCEEEecC----ChhHHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCC
Q 001947 261 PPNFIKLPKDAY--TPDFMAASDCMLGKI----GYGTVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDL 334 (992)
Q Consensus 261 ~~nv~v~~f~~~--~p~lL~aaDlvIt~~----G~~Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~ 334 (992)
++|+++++++++ ++++|..||++|..+ ...+++||+++|+|+|+.+.+ .+.+.+.....|...+.
T Consensus 66 ~~~v~~~g~~~~~~~~~~~~~ad~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~------~~~e~i~~~~~g~~~~~--- 136 (166)
T d2f9fa1 66 PDNVKFLGSVSEEELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGKPVIAVNEG------GFKETVINEKTGYLVNA--- 136 (166)
T ss_dssp CTTEEEEESCCHHHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTCCEEEESSH------HHHHHCCBTTTEEEECS---
T ss_pred cCcEEEeecccccccccccccccccccccccccccccccccccccccceeecCC------cceeeecCCcccccCCC---
Confidence 578888888753 678999999999754 235899999999999998642 34455666777876643
Q ss_pred ChhhHHHHHHHHhhCCC
Q 001947 335 LTGHWKPYLERAISLKP 351 (992)
Q Consensus 335 ~~~~l~~al~~ll~~~~ 351 (992)
+++.|.++|.++++++.
T Consensus 137 d~~~~~~~i~~l~~~~~ 153 (166)
T d2f9fa1 137 DVNEIIDAMKKVSKNPD 153 (166)
T ss_dssp CHHHHHHHHHHHHHCTT
T ss_pred CHHHHHHHHHHHHhCHH
Confidence 36889999999998764
No 33
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=97.11 E-value=0.00043 Score=67.35 Aligned_cols=62 Identities=26% Similarity=0.355 Sum_probs=54.7
Q ss_pred CEEEEEEeCCCCCCCCchHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHhccccCCCCCccchhhhhccCc
Q 001947 630 SISMLVSSAVPEGKGVSSSASVEVASMSAIAAAHGLNIHPRDLALLCQKVENHIVGAPCGVMDQMASACGEA 701 (992)
Q Consensus 630 g~~i~i~s~iP~g~GLgSSAA~~va~~~al~~~~~~~l~~~el~~la~~~E~~~~G~~~G~~D~~~~~~Gg~ 701 (992)
.++|.-.+++|.++||+||||..+|++.|+.++++++++.+++-.+|+.+- |..| =+++||.
T Consensus 101 ~~~I~S~N~FP~aaGLASSAsg~aAl~~al~~~~~~~~~~~~~S~lARlGS----GSAc------RSi~Gg~ 162 (188)
T d1fi4a1 101 KLHIVSENNFPTAAGLASSAAGFAALVSAIAKLYQLPQSTSEISRIARKGS----GSAC------RSLFGGY 162 (188)
T ss_dssp CEEEEEEECCCTTSCCCHHHHHHHHHHHHHHHHTTCCSCHHHHHHHHHHHH----GGGG------GGGSSSE
T ss_pred eEEEEecCCCcchhhHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHhhc----cchh------hhhcCCe
Confidence 588888999999999999999999999999999999999999999999754 3333 3899995
No 34
>d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]}
Probab=95.98 E-value=0.036 Score=58.48 Aligned_cols=94 Identities=15% Similarity=0.287 Sum_probs=60.4
Q ss_pred HHHHHhCCCCCCcEEEEEcCCCCC--h-h------hHHHhhCCCCcEEEEeCCCCCC---------C----CCCeEEcCC
Q 001947 212 EVRKELGIEDDVKLLILNFGGQPA--G-W------KLKEEYLPSGWKCLVCGASDSQ---------L----PPNFIKLPK 269 (992)
Q Consensus 212 e~r~~l~~~~d~~~Vlvs~Gg~~~--~-~------~ll~~l~~~~~~~Vv~G~~~~~---------l----~~nv~v~~f 269 (992)
.+.+.+++..+++.|++..|+... . | ++.+.+...++.++++|...+. + ..++.-+..
T Consensus 169 ~~~~~~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~~~~~ivl~g~~~e~~~~~~~~~~~~~~~~~~~~~l~g 248 (348)
T d1pswa_ 169 YTCNQFSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLFGSAKDHEAGNEILAALNTEQQAWCRNLAG 248 (348)
T ss_dssp HHHHHTTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHTTSCHHHHTTEEECTT
T ss_pred HHHHHhccccCCCeEEeccccchhhccccchHHHhhhHHHHhhcCCccccccccchHHHHHHHHHhhhcccccccccccC
Confidence 455677888888888888875433 2 2 2333343456677777653321 1 123333221
Q ss_pred CCCH---HHHHhhcCEEEecCChhHHHHHHHcCCcEEEEe
Q 001947 270 DAYT---PDFMAASDCMLGKIGYGTVSEALAYKLPFVFVR 306 (992)
Q Consensus 270 ~~~~---p~lL~aaDlvIt~~G~~Tv~Eal~~GvP~V~iP 306 (992)
...+ ..+|..||++||.=+ +.+.-|.++|+|+|++=
T Consensus 249 ~~sl~el~~li~~a~l~I~~Dt-g~~HlAaa~g~p~i~lf 287 (348)
T d1pswa_ 249 ETQLDQAVILIAACKAIVTNDS-GLMHVAAALNRPLVALY 287 (348)
T ss_dssp TSCHHHHHHHHHTSSEEEEESS-HHHHHHHHTTCCEEEEE
T ss_pred CccHHHHHHHHhcceeEeecCc-cHHHHHHHcCCCEEEEE
Confidence 1233 367789999999655 78999999999999995
No 35
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]}
Probab=91.82 E-value=0.036 Score=49.36 Aligned_cols=37 Identities=11% Similarity=0.106 Sum_probs=29.7
Q ss_pred CchHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcc
Q 001947 894 SDGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLR 943 (992)
Q Consensus 894 ~~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~ 943 (992)
+|+++++.+..++ .|+.+++|||+| +|+..+.++..+
T Consensus 62 ~p~l~~~~~~l~~-----------~g~~~~~mSGSG--st~F~l~~~~~~ 98 (120)
T d1ueka2 62 FPELKEVRGRMRA-----------LGLRGVLMSGSG--SAFFGLAEGPDH 98 (120)
T ss_dssp CTHHHHHHHHHHH-----------TTCEEEEECTTS--SCEEEECSSHHH
T ss_pred HhhHHHHHHHHHH-----------hhhhheeecCCC--CeEEEEeCCHHH
Confidence 5788888887776 588999999988 999988876443
No 36
>d1y4ia1 c.67.1.3 (A:2-398) Methionine gamma-lyase, MGL {Citrobacter freundii [TaxId: 546]}
Probab=89.03 E-value=0.03 Score=60.55 Aligned_cols=49 Identities=10% Similarity=-0.160 Sum_probs=43.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQGL 452 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 452 (992)
.++|.+..|..++|++..+..|...|.|. +++|| |+||+|||..||+..
T Consensus 341 g~eSLi~~p~~~th~~~~~e~r~~~Gi~~----~liRlsvGlEd~~DLi~Dl~~A 391 (397)
T d1y4ia1 341 DTETLIQHPASMTHSPVAPEERLKAGITD----GLIRLSVGLEDPEDIINDLEHA 391 (397)
T ss_dssp CSSCEEECTTTTTTSSSCHHHHHHTTCCT----TEEEEECCSSCHHHHHHHHHHH
T ss_pred cccceeeCccccccccCCHHHHHHcCCCc----CEEEEEeccCCHHHHHHHHHHH
Confidence 67888999999999998888887889888 99999 899999999998753
No 37
>d2ctza1 c.67.1.3 (A:1-421) O-acetyl-L-homoserine sulfhydrylase {Thermus thermophilus [TaxId: 274]}
Probab=88.28 E-value=0.052 Score=59.10 Aligned_cols=48 Identities=10% Similarity=-0.115 Sum_probs=42.3
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++..+..|.+.|.|. +++|| ||||+|||..||+.
T Consensus 369 g~eSLi~~pa~~th~~~~~e~r~~~GI~~----~liRlSvGlEd~eDLi~DL~q 418 (421)
T d2ctza1 369 DTRTLAIHPASTTHSQLSPEEQAQAGVSP----EMVRLSVGLEHVEDLKAELKE 418 (421)
T ss_dssp CSSCEEECGGGTTTTTSCHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred cccceeeCcccccchhCCHHHHHhcCCCc----CeEEEEeccCCHHHHHHHHHH
Confidence 67788999999999998877777778888 99999 89999999999864
No 38
>d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]}
Probab=88.26 E-value=0.27 Score=53.99 Aligned_cols=76 Identities=17% Similarity=0.125 Sum_probs=54.8
Q ss_pred eEEcCCCC--CHHHHHhhcCEEEecC---Chh-HHHHHHHcCCc-----EEEEeCCCCCChHHHHHHHHHcCcEEEEecC
Q 001947 264 FIKLPKDA--YTPDFMAASDCMLGKI---GYG-TVSEALAYKLP-----FVFVRRDYFNEEPFLRNMLEFYQGGVEMIRR 332 (992)
Q Consensus 264 v~v~~f~~--~~p~lL~aaDlvIt~~---G~~-Tv~Eal~~GvP-----~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~ 332 (992)
+.+.+..+ .+..+++.||+++..+ |+| ++.|+++||+| +|+-...+..|+ .+-|+.+++.
T Consensus 333 v~~~~~~~~~~l~a~~~~Adv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~---------l~~g~lVnP~ 403 (456)
T d1uqta_ 333 YYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANE---------LTSALIVNPY 403 (456)
T ss_dssp EEECSCCCHHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGT---------CTTSEEECTT
T ss_pred eeccCCcCHHHHhHHHhhhceeecCCccCCCCcHHHHHHHhCCCCCCCcEEEeCCCCCHHH---------hCCeEEECcC
Confidence 44444433 3457889999999753 655 78999999999 566555555555 2347888876
Q ss_pred CCChhhHHHHHHHHhhCC
Q 001947 333 DLLTGHWKPYLERAISLK 350 (992)
Q Consensus 333 ~~~~~~l~~al~~ll~~~ 350 (992)
+ .+.++++|.++|+++
T Consensus 404 d--~~~~A~ai~~aL~~~ 419 (456)
T d1uqta_ 404 D--RDEVAAALDRALTMS 419 (456)
T ss_dssp C--HHHHHHHHHHHHTCC
T ss_pred C--HHHHHHHHHHHHcCC
Confidence 6 589999999999865
No 39
>d1e5ea_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL1 [TaxId: 5722]}
Probab=87.80 E-value=0.062 Score=58.06 Aligned_cols=48 Identities=13% Similarity=-0.130 Sum_probs=42.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++.....|.+.|.|+ +++|+ |+||.|||+.||+.
T Consensus 338 g~eSLi~~p~~~th~~~~~~~r~~~Gi~~----~liRlSVGlEd~eDLi~Dl~q 387 (394)
T d1e5ea_ 338 GCESLIQHPASMTHAVVPKEEREAAGITD----GMIRLSVGIEDADELIADFKQ 387 (394)
T ss_dssp SSSCEEECGGGTTTTTSCHHHHHHTTCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred CccceeECccccccccCCHHHHHhcCCCc----CEEEEEeccCCHHHHHHHHHH
Confidence 66788999999999999887777778888 99999 89999999999864
No 40
>d1pffa_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Trichomonas vaginalis, MGL2 [TaxId: 5722]}
Probab=87.23 E-value=0.044 Score=57.90 Aligned_cols=48 Identities=10% Similarity=-0.067 Sum_probs=42.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++.++..|...|.|. +++|+ ||||+|||..||+.
T Consensus 276 ~~~SLi~~p~~~~h~~~~~e~~~~~Gi~~----~liRlsvGlE~~~DLi~Dl~~ 325 (331)
T d1pffa_ 276 GPESLIQHPASMTHAGVPKEEREAAGLTD----NLIRLSVGCENVQDIIDDLKQ 325 (331)
T ss_dssp SSSCEEECHHHHTSTTSCHHHHHHTTCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred CCceeEeCccccccccCCHHHHHhcCCCc----CeEEEEeeeCCHHHHHHHHHH
Confidence 77889999999999998877777778888 99999 89999999999864
No 41
>d1ibja_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=86.88 E-value=0.044 Score=58.98 Aligned_cols=48 Identities=19% Similarity=0.060 Sum_probs=43.4
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|..++|++.....|.+.|.++ +++|+ ||||+|||+.||+.
T Consensus 324 ~~~SLi~~p~~~th~~~~~e~r~~~Gi~~----~lvRlSvGlE~~eDLi~Dl~q 373 (380)
T d1ibja_ 324 SVKSLISMPCFMSHASIPAEVREARGLTE----DLVRISAGIEDVDDLISDLDI 373 (380)
T ss_dssp SSSCEEECTTTTTTCSCCSSSSSSSSCCT----TCEEEECCSSCHHHHHHHHHH
T ss_pred CccccccCchhhhhhcCCHHHHHHcCCCc----CeEEEEeccCCHHHHHHHHHH
Confidence 56678999999999999888888899999 99999 89999999999864
No 42
>d1gc0a_ c.67.1.3 (A:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
Probab=84.62 E-value=0.079 Score=57.06 Aligned_cols=48 Identities=15% Similarity=-0.089 Sum_probs=42.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|.+..+..|...|.|. +++|+ ||||+|||..||+.
T Consensus 337 g~eSLi~~pa~~th~~~~~e~r~~~Gi~~----~liRlSVGlEd~eDLi~Dl~~ 386 (392)
T d1gc0a_ 337 DAESLAQHPASMTHSSYTPEERAHYGISE----GLVRLSVGLEDIDDLLADVQQ 386 (392)
T ss_dssp CSSCEEECGGGTTTSSSCHHHHHHTTCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred CcChhhcCccccccccCCHHHHHHcCCCc----CeEEEEeeeCCHHHHHHHHHH
Confidence 67888999999999998877777789888 99999 89999999999864
No 43
>d1cs1a_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Escherichia coli [TaxId: 562]}
Probab=84.49 E-value=0.066 Score=57.57 Aligned_cols=48 Identities=17% Similarity=-0.145 Sum_probs=42.0
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++..+..|...|.++ +++|+ |+||+|||..||+.
T Consensus 327 g~eSLi~~p~~~th~~~~~e~r~~~Gi~~----~lvRlSvGlEd~eDLi~Dl~~ 376 (384)
T d1cs1a_ 327 GVESLISHAATMTHAGMAPEARAAAGISE----TLLRISTGIEDGEDLIADLEN 376 (384)
T ss_dssp SSSCEEEEGGGTTTTTSCHHHHHHHTCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred CccceeccccccccccCCHHHHHhcCCCc----CeEEEEeccCCHHHHHHHHHH
Confidence 67788999999999998877777778888 99999 89999999999864
No 44
>d1qgna_ c.67.1.3 (A:) Cystathionine gamma-synthase, CGS {Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Probab=81.06 E-value=0.047 Score=59.08 Aligned_cols=48 Identities=17% Similarity=-0.085 Sum_probs=42.6
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|++.+...+.+.|.|. +++|+ ||||+|||..||+.
T Consensus 344 g~~SLi~~p~~~th~~~~~~~~~~~Gi~~----~liRlSvGlEd~eDLi~Dl~~ 393 (398)
T d1qgna_ 344 GCESIVDQPAIMSYWDLSQSDRAKYGIMD----NLVRFSFGVEDFDDLKADILQ 393 (398)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCS----SEEEEECCSSCHHHHHHHHHH
T ss_pred CCcceeeCcchhccccCCHHHHHhcCCCc----CEEEEEeccCCHHHHHHHHHH
Confidence 56678999999999998888888889999 99999 89999999999864
No 45
>d1n8pa_ c.67.1.3 (A:) Cystathionine gamma-lyase (CYS3) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=80.33 E-value=0.11 Score=56.13 Aligned_cols=48 Identities=13% Similarity=-0.098 Sum_probs=42.7
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
.++|.+..|..++|.+.....|...|.++ +++|+ |+||.|||+.||+.
T Consensus 337 g~~SLi~~p~~~~h~~~~~~~r~~~gi~~----~liRlSvGlE~~~DLi~Dl~~ 386 (393)
T d1n8pa_ 337 GIESLLEVPAVMTHGGIPKEAREASGVFD----DLVRISVGIEDTDDLLEDIKQ 386 (393)
T ss_dssp CSSCEEECTTTTTSCSSCTTTTTTTSCCT----TEEEEECCSSCHHHHHHHHHH
T ss_pred CcCceEeCchhhccccCCHHHHHhcCCCc----CEEEEEeccCCHHHHHHHHHH
Confidence 56778999999999998888888889999 99999 89999999999864
No 46
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]}
Probab=77.01 E-value=0.34 Score=42.76 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=23.0
Q ss_pred chHHHHHHHHHHHhhhccccCCCCCcccceeeccccCceEEEEccCCcc
Q 001947 895 DGTDRLVQLVQEIQHSKVSKSKDGTLFGAKITGGGSGGTICVIGRNSLR 943 (992)
Q Consensus 895 ~~lD~lv~~a~~~~~~~~~~~~~~g~~GakltGaG~GG~vi~l~~~~~~ 943 (992)
|++.++.+...+ .| .++|||.| +|+..+.++..+
T Consensus 57 P~I~~~~~~L~~-----------~g--~~~MSGSG--stvF~~f~~~~~ 90 (120)
T d1oj4a2 57 REVDAVLSWLLE-----------YA--PSRLTGTG--ACVFAEFDTESE 90 (120)
T ss_dssp HHHHHHHHHHTT-----------TS--CEEECTTS--SCEEEEESSHHH
T ss_pred HHHHHHHHHHhh-----------cc--cceecCCC--CEEEEEeCCHHH
Confidence 666666654433 35 47999888 999888776443
No 47
>d1cl1a_ c.67.1.3 (A:) Cystathionine beta-lyase, CBL {Escherichia coli [TaxId: 562]}
Probab=75.03 E-value=0.58 Score=50.05 Aligned_cols=46 Identities=11% Similarity=-0.196 Sum_probs=36.2
Q ss_pred cCCCcccccccccccccccccCCCCCCCCCCCCCCCcc--ccccceeecCCCCC
Q 001947 400 VPGRDVSIPEWYQTAEDELGLSASRSPPCTPEGDSTVK--FTEDFEILHGDCQG 451 (992)
Q Consensus 400 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 451 (992)
..+|.+..|.-++|++.++. .+.|.|+ +++|| ||||.|||+.||+.
T Consensus 338 ~~~SLi~~~~~~~~~~~~~~--~~~gi~~----~liRlSVGlEd~eDLi~Dl~~ 385 (391)
T d1cl1a_ 338 GYESLILANQPEHIAAIRPQ--GEIDFSG----TLIRLHIGLEDVDDLIADLDA 385 (391)
T ss_dssp SSSCEEEEECHHHHHHTSTT--CCCCCCS----CEEEEECCSSCHHHHHHHHHH
T ss_pred CCccceeCCcccccccCCch--HhcCCCc----CEEEEEeccCCHHHHHHHHHH
Confidence 45667777888888877653 3458888 89999 89999999999864
No 48
>d1j9ja_ c.106.1.1 (A:) SurE homolog TM1662 {Thermotoga maritima [TaxId: 2336]}
Probab=63.37 E-value=12 Score=36.54 Aligned_cols=30 Identities=20% Similarity=0.362 Sum_probs=19.8
Q ss_pred ccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 22 VTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 22 v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
...-|. |.-=..+|+++|. ++|+|+++.+.
T Consensus 6 tNDDGi-~s~gl~~L~~~l~-~~~~V~vvAP~ 35 (247)
T d1j9ja_ 6 TNDDGI-QSKGIIVLAELLS-EEHEVFVVAPD 35 (247)
T ss_dssp ECSSCT-TCHHHHHHHHHHT-TTSEEEEEEES
T ss_pred EcCCCC-CChHHHHHHHHHh-cCCeEEEEecC
Confidence 566664 2222457788885 58999998664
No 49
>d1jx7a_ c.114.1.1 (A:) Hypothetical protein YchN {Escherichia coli [TaxId: 562]}
Probab=48.86 E-value=8.4 Score=32.81 Aligned_cols=39 Identities=10% Similarity=0.056 Sum_probs=29.7
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCC--cEEEEe
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGH--DVHVVT 51 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~Gh--eV~~~~ 51 (992)
|+++.|.+.....|.-++..++.+|.++.++|| +|.++-
T Consensus 1 M~k~~ii~~~~P~~~~~~~~al~~A~a~~~~~~~~eV~vff 41 (117)
T d1jx7a_ 1 MQKIVIVANGAPYGSESLFNSLRLAIALREQESNLDLRLFL 41 (117)
T ss_dssp CCEEEEEECCCTTTCSHHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CcEEEEEEeCCCCCcHHHHHHHHHHHHHHhcCCCCcEEEEE
Confidence 788888665555566789999999999988776 676653
No 50
>d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}
Probab=47.25 E-value=18 Score=31.08 Aligned_cols=28 Identities=21% Similarity=0.176 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHCCCcEEEEeCCCCccc
Q 001947 31 TRVVEVVRNLISAGHDVHVVTGAPDFVF 58 (992)
Q Consensus 31 ~r~laLA~~L~~~GheV~~~~~~~~~~~ 58 (992)
.-+...+++|++.|+++.++...|.-+.
T Consensus 25 y~~~~a~~aLk~~g~~~IliN~NPeTVs 52 (121)
T d1a9xa4 25 YCCVHASLALREDGYETIMVNCNPETVS 52 (121)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCTTSST
T ss_pred HHHHHHHHHHHhcCCeEEEEecChhhhh
Confidence 5567889999999999999977764443
No 51
>d2hy5b1 c.114.1.1 (B:205-336) Intracellular sulfur oxidation protein DsrF {Chromatium vinosum [TaxId: 1049]}
Probab=44.86 E-value=10 Score=33.24 Aligned_cols=38 Identities=24% Similarity=0.120 Sum_probs=32.7
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEE
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~ 50 (992)
|||+.|++-.+..|.-+..-++.+|.++...||+|.++
T Consensus 1 Mkk~l~ii~~aPy~s~~a~~al~~A~aa~~~~~~v~vf 38 (132)
T d2hy5b1 1 VKKFMYLNRKAPYGTIYAWEALEVVLIGAAFDQDVCVL 38 (132)
T ss_dssp CCEEEEEECSCTTTSSHHHHHHHHHHHHGGGCCEEEEE
T ss_pred CcEEEEEecCCCCCcHHHHHHHHHHHHHHcCCCCEEEE
Confidence 88999877666667788999999999999999999865
No 52
>d1byia_ c.37.1.10 (A:) Dethiobiotin synthetase {Escherichia coli [TaxId: 562]}
Probab=44.49 E-value=9.7 Score=35.55 Aligned_cols=31 Identities=13% Similarity=0.073 Sum_probs=27.1
Q ss_pred eccCCCcccHHHHHHHHHHHHHCCCcEEEEe
Q 001947 21 YVTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (992)
Q Consensus 21 ~v~g~G~GHv~r~laLA~~L~~~GheV~~~~ 51 (992)
.-+|+|.|=.+-+..||.+|.++|++|.++-
T Consensus 7 ~gt~~GVGKTtvs~~La~aLa~~G~rVl~id 37 (224)
T d1byia_ 7 TGTDTEVGKTVASCALLQAAKAAGYRTAGYK 37 (224)
T ss_dssp EESSTTSCHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred EECCCCccHHHHHHHHHHHHHHCCCeEEEEC
Confidence 3455689999999999999999999999873
No 53
>d1s2da_ c.23.14.1 (A:) Purine transdeoxyribosylase {Lactobacillus helveticus [TaxId: 1587]}
Probab=40.27 E-value=13 Score=33.98 Aligned_cols=33 Identities=18% Similarity=0.247 Sum_probs=26.6
Q ss_pred HHHhhcCEEEe-----cCChhHHHH---HHHcCCcEEEEeC
Q 001947 275 DFMAASDCMLG-----KIGYGTVSE---ALAYKLPFVFVRR 307 (992)
Q Consensus 275 ~lL~aaDlvIt-----~~G~~Tv~E---al~~GvP~V~iP~ 307 (992)
..|..||++|. ....||.+| |.++|+|+|++..
T Consensus 77 ~~i~~sD~vIA~ldg~~~D~GTa~EiG~A~a~gKPvi~~~~ 117 (167)
T d1s2da_ 77 TGISNATCGVFLYDMDQLDDGSAFEIGFMRAMHKPVILVPF 117 (167)
T ss_dssp HHHHHCSEEEEEEESSSCCHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHCCEEEEEeCCCCCCccHHHHHHHHHHCCCeEEEEec
Confidence 46788999986 346689888 6889999999863
No 54
>d2d1pb1 c.114.1.1 (B:1-119) tRNA 2-thiouridine synthesizing protein C, TusC {Escherichia coli [TaxId: 562]}
Probab=40.07 E-value=16 Score=30.97 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=31.7
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEe
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVT 51 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~ 51 (992)
|+++.|++-....|.-...-++.+|.++...||+|.++-
T Consensus 1 Mkkv~ii~~~~P~~~~~~~~al~~Ala~a~~~~~V~iff 39 (119)
T d2d1pb1 1 MKRIAFVFSTAPHGTAAGREGLDALLATSALTDDLAVFF 39 (119)
T ss_dssp CCCEEEEECSCTTTSTHHHHHHHHHHHHHTTCSCEEEEE
T ss_pred CcEEEEEEcCCCCCcHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 888888665555566778889999999999999998663
No 55
>d2f62a1 c.23.14.1 (A:9-160) Nucleoside 2-deoxyribosyltransferase {Trypanosoma brucei [TaxId: 5691]}
Probab=38.75 E-value=13 Score=33.33 Aligned_cols=33 Identities=18% Similarity=0.217 Sum_probs=27.4
Q ss_pred HHHhhcCEEEec--------CChhHHHH---HHHcCCcEEEEeC
Q 001947 275 DFMAASDCMLGK--------IGYGTVSE---ALAYKLPFVFVRR 307 (992)
Q Consensus 275 ~lL~aaDlvIt~--------~G~~Tv~E---al~~GvP~V~iP~ 307 (992)
..|..||+||.. .-.||.+| |.+.|+|++.+..
T Consensus 55 ~~i~~~D~VIA~Ld~frg~~~D~GTa~EiG~A~algKPVi~~~~ 98 (152)
T d2f62a1 55 QMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAALNKMVLTFTS 98 (152)
T ss_dssp HHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHHTTCEEEEECS
T ss_pred HHHHhCCEEEEEccccCCCCCCchHHHHHHHHHHCCCeEEEEec
Confidence 678899999983 35689999 6789999999963
No 56
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=37.21 E-value=13 Score=37.40 Aligned_cols=43 Identities=26% Similarity=0.342 Sum_probs=32.8
Q ss_pred CCCCccEEEEEeccCC---C---cccHHHHH---HHHHHHHHCCCcEEEEeCCC
Q 001947 10 SASSKHLVFAYYVTGH---G---FGHATRVV---EVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 10 ~~~m~~~~Il~~v~g~---G---~GHv~r~l---aLA~~L~~~GheV~~~~~~~ 54 (992)
+.+..+++| |+||+ | .||+.-++ .||+.|+..|++|+++++..
T Consensus 17 ~~~~~~~~~--yv~Gptv~g~~HIGH~R~av~gD~laR~lr~~G~~V~~~~~~d 68 (315)
T d1li5a2 17 PIHAGEVGM--YVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNIT 68 (315)
T ss_dssp CSSTTEEEE--EECCCBSSSCCBHHHHHHHHHHHHHHHHHHHHTCEEEEEECBB
T ss_pred cCCCCeEEE--EecCCcCCCCcccchhHHHHHHHHHHHHHHHcCCcEEEEeccc
Confidence 445567888 45776 1 39987776 78999999999999987753
No 57
>d1f8ya_ c.23.14.1 (A:) Nucleoside 2-deoxyribosyltransferase {Lactobacillus leichmannii [TaxId: 28039]}
Probab=36.89 E-value=14 Score=33.23 Aligned_cols=33 Identities=27% Similarity=0.218 Sum_probs=26.7
Q ss_pred HHHhhcCEEEec-----CChhHHHH---HHHcCCcEEEEeC
Q 001947 275 DFMAASDCMLGK-----IGYGTVSE---ALAYKLPFVFVRR 307 (992)
Q Consensus 275 ~lL~aaDlvIt~-----~G~~Tv~E---al~~GvP~V~iP~ 307 (992)
..|..||++|.. .-.||.+| |.+.|+|+|++..
T Consensus 73 ~~i~~aD~via~ldg~~~D~Gta~EiG~A~a~gKpvi~~~~ 113 (156)
T d1f8ya_ 73 NGIKTNDIMLGVYIPDEEDVGLGMELGYALSQGKYVLLVIP 113 (156)
T ss_dssp HHHHTSSEEEEECCGGGCCHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHCCEEEEEeCCCCCCCCHHHHHHHHHHcCCcEEEEec
Confidence 567899999973 34689999 5789999999863
No 58
>d2hy5a1 c.114.1.1 (A:1-130) Sulfurtransferase DsrE {Chromatium vinosum [TaxId: 1049]}
Probab=33.55 E-value=23 Score=30.60 Aligned_cols=25 Identities=12% Similarity=0.337 Sum_probs=21.1
Q ss_pred CcccHHHHHHHHHHHHHCCCcE-EEE
Q 001947 26 GFGHATRVVEVVRNLISAGHDV-HVV 50 (992)
Q Consensus 26 G~GHv~r~laLA~~L~~~GheV-~~~ 50 (992)
+.-....++.+|+++.+.||+| .++
T Consensus 13 ~~~~a~~al~fA~aal~~gh~V~~vF 38 (130)
T d2hy5a1 13 QHQASDSAYQFAKAALEKGHEIFRVF 38 (130)
T ss_dssp TSTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHCCCeEEEEE
Confidence 5556889999999999999999 454
No 59
>d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]}
Probab=33.43 E-value=31 Score=29.74 Aligned_cols=31 Identities=19% Similarity=0.214 Sum_probs=23.9
Q ss_pred cHHHHHHHHHHHHHCCCcEEEEeCCCCcccc
Q 001947 29 HATRVVEVVRNLISAGHDVHVVTGAPDFVFT 59 (992)
Q Consensus 29 Hv~r~laLA~~L~~~GheV~~~~~~~~~~~~ 59 (992)
+=.-+...+++|++.|+++.++...|.-+..
T Consensus 26 fDy~~~~a~~alke~g~~~iliN~NP~TVst 56 (127)
T d1a9xa3 26 FDYSGAQACKALREEGYRVINVNSNPATIMT 56 (127)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEECSCTTCGGG
T ss_pred hHHHHHHHHHHHHHcCCeEEEecCchHhhhc
Confidence 3456778899999999999999777644433
No 60
>d1rcua_ c.129.1.1 (A:) Hypothetical protein TM1055 {Thermotoga maritima [TaxId: 2336]}
Probab=33.19 E-value=15 Score=33.67 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=26.6
Q ss_pred HHHhhcCEEEecC-ChhHHH---HHHHcCCcEEEEeCCC
Q 001947 275 DFMAASDCMLGKI-GYGTVS---EALAYKLPFVFVRRDY 309 (992)
Q Consensus 275 ~lL~aaDlvIt~~-G~~Tv~---Eal~~GvP~V~iP~~~ 309 (992)
.++..||++|.-+ |.||+. |++..++|++++...+
T Consensus 92 ~m~~~sda~I~lPGG~GTl~El~~a~~l~KPiilln~~g 130 (170)
T d1rcua_ 92 VLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRGTG 130 (170)
T ss_dssp HHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETTSC
T ss_pred HHhhcccceeeeccccchHHHHHHHHHhCCceEEecCCC
Confidence 3558899999754 578755 5888999999996444
No 61
>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}
Probab=32.68 E-value=15 Score=33.92 Aligned_cols=75 Identities=15% Similarity=0.159 Sum_probs=48.3
Q ss_pred HHhCCCCCCcEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCCC-------C----CCCeEEcCCC--CCHHHHHhhcC
Q 001947 215 KELGIEDDVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ-------L----PPNFIKLPKD--AYTPDFMAASD 281 (992)
Q Consensus 215 ~~l~~~~d~~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~~-------l----~~nv~v~~f~--~~~p~lL~aaD 281 (992)
+..+.+-..++|+|++|+.+.+..+.+.|...++.+++++.+.+. + ...+...+.. ..+.+.+..+|
T Consensus 15 ~~~~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iD 94 (191)
T d1luaa1 15 KAAGGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAH 94 (191)
T ss_dssp HHTTSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCS
T ss_pred HHcCCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcC
Confidence 444544445689999988887767777776678888888876431 1 1122222222 23446778899
Q ss_pred EEEecCCh
Q 001947 282 CMLGKIGY 289 (992)
Q Consensus 282 lvIt~~G~ 289 (992)
++|+.+|.
T Consensus 95 ilin~Ag~ 102 (191)
T d1luaa1 95 FVFTAGAI 102 (191)
T ss_dssp EEEECCCT
T ss_pred eeeecCcc
Confidence 99998875
No 62
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA {Escherichia coli [TaxId: 562]}
Probab=31.05 E-value=28 Score=33.93 Aligned_cols=44 Identities=18% Similarity=0.306 Sum_probs=36.0
Q ss_pred CCCCccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCCCC
Q 001947 10 SASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGAPD 55 (992)
Q Consensus 10 ~~~m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~~~ 55 (992)
..+|+|+.| +..-.|.|=.+-+.++|.+|.++|++|.++...+.
T Consensus 4 ~~~~p~~i~--~sGKGGVGKTTvaa~lA~~lA~~G~rVLlvD~Dp~ 47 (296)
T d1ihua1 4 LQNIPPYLF--FTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPA 47 (296)
T ss_dssp GSSCCSEEE--EECSTTSSHHHHHHHHHHHHHHTTCCEEEEECCTT
T ss_pred CCCCCeEEE--EECCCcChHHHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 467877655 55556799999999999999999999999977653
No 63
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=30.20 E-value=30 Score=32.90 Aligned_cols=37 Identities=11% Similarity=0.179 Sum_probs=26.1
Q ss_pred HHHHHHcCCCcEEEECC---CchHHHHHHH----cCCcEEEEec
Q 001947 110 EVEWLNSIKADLVVSDV---VPVACRAAAD----AGIRSVCVTN 146 (992)
Q Consensus 110 ~~~~L~~~kPDlVVsD~---~~~a~~aA~~----~gIP~v~is~ 146 (992)
..+.+++|+||.+|.-. ...+...|+. .|||+|.+++
T Consensus 55 ~~~~~~~~~pDf~i~isPN~a~PGP~~ARE~l~~~giP~ivI~D 98 (282)
T d1u6ka1 55 ALDIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGD 98 (282)
T ss_dssp HHHHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEE
T ss_pred HHHHHHhcCCCEEEEECCCCCCCCcHHHHHHHHhcCCCEEEEcC
Confidence 35567899999998543 3345555543 4899999976
No 64
>d2d1pa1 c.114.1.1 (A:1-128) tRNA 2-thiouridine synthesizing protein D, TusD {Escherichia coli [TaxId: 562]}
Probab=29.90 E-value=29 Score=29.90 Aligned_cols=34 Identities=35% Similarity=0.653 Sum_probs=23.8
Q ss_pred EEEEeccCCCcc--cHHHHHHHHHHHHHCCCcEE-EE
Q 001947 17 VFAYYVTGHGFG--HATRVVEVVRNLISAGHDVH-VV 50 (992)
Q Consensus 17 ~Il~~v~g~G~G--Hv~r~laLA~~L~~~GheV~-~~ 50 (992)
++.+.+++.-.+ -...++.+|+++.++||+|. ++
T Consensus 2 k~~i~v~~~P~~~~~a~~A~~fA~aal~~Gh~V~~vF 38 (128)
T d2d1pa1 2 RFAIVVTGPAYGTQQASSAFQFAQALIADGHELSSVF 38 (128)
T ss_dssp EEEEEECSCSSSSSHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEEEecCCCCcHHHHHHHHHHHHHHhCCCceeEEE
Confidence 344455544333 47788899999999999993 54
No 65
>d1g5qa_ c.34.1.1 (A:) Epidermin modifying enzyme (peptidyl-cysteine decarboxylase) EpiD {Staphylococcus epidermidis [TaxId: 1282]}
Probab=29.53 E-value=1.1e+02 Score=27.56 Aligned_cols=102 Identities=13% Similarity=-0.022 Sum_probs=55.2
Q ss_pred EEEEEcCCCCCh--hhHHHhhCCCCc--EEEEeCCCCCC---------CCCCeEEcCCCCCHH--HHHhhcCEEEe-cCC
Q 001947 225 LLILNFGGQPAG--WKLKEEYLPSGW--KCLVCGASDSQ---------LPPNFIKLPKDAYTP--DFMAASDCMLG-KIG 288 (992)
Q Consensus 225 ~Vlvs~Gg~~~~--~~ll~~l~~~~~--~~Vv~G~~~~~---------l~~nv~v~~f~~~~p--~lL~aaDlvIt-~~G 288 (992)
+++.-.||.+.- .++++.|...++ .++++ ++... +..++..-....+++ ++-+.+|++|- .+=
T Consensus 5 Ill~vtGsiaa~k~~~li~~L~~~g~~V~vv~T-~sA~~fv~~~~l~~~~~~~~~~~~~~~~~hi~l~~~aD~~lVaPaT 83 (174)
T d1g5qa_ 5 LLICATASINVININHYIVELKQHFDEVNILFS-PSSKNFINTDVLKLFCDNLYDEIKDPLLNNINIVENHEYILVLPAS 83 (174)
T ss_dssp EEEEECSCGGGGGHHHHHHHHTTTBSCEEEEEC-GGGGGTSCGGGGGGTSSCEECTTTCTTCCHHHHHHTCSEEEEEEEC
T ss_pred EEEEEECHHHHHHHHHHHHHHHHCCCeEEEEEe-hhhhhhccHhHHhHhhCccccccccccccceeeccccceEEEEecC
Confidence 555566777663 456666655444 44444 22211 234432221112222 56678999983 222
Q ss_pred hh-------------HHHHHHHcCCcEEEEeCCC--CCCh---HHHHHHHHHcCcEE
Q 001947 289 YG-------------TVSEALAYKLPFVFVRRDY--FNEE---PFLRNMLEFYQGGV 327 (992)
Q Consensus 289 ~~-------------Tv~Eal~~GvP~V~iP~~~--~~EQ---~~NA~~le~~G~Gi 327 (992)
.| .+.-+++..+|+++.|.-. ..+. +.|-+.|.+.|.-+
T Consensus 84 aNtlaKiA~GiaDnllt~~~la~~~piiiaPaMn~~Mw~~p~~~~nl~~L~~~G~~v 140 (174)
T d1g5qa_ 84 ANTINKIANGICDNLLTTVCLTGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKV 140 (174)
T ss_dssp HHHHHHHHTTCCCSHHHHHHHHTGGGEEEEECSCHHHHTCHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHhhcccchhheeecccccEEEEecccHHHHhhhhHHHHHHHHHHCCCEE
Confidence 22 3345688899999999411 1121 46777788777654
No 66
>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}
Probab=29.36 E-value=18 Score=29.18 Aligned_cols=25 Identities=16% Similarity=0.020 Sum_probs=18.7
Q ss_pred CCcEEEECC----CchHHHHHHHcCCcEE
Q 001947 118 KADLVVSDV----VPVACRAAADAGIRSV 142 (992)
Q Consensus 118 kPDlVVsD~----~~~a~~aA~~~gIP~v 142 (992)
++|+||... .-.-..+|+..|||++
T Consensus 60 ~~d~vV~SsAI~~~npel~~A~~~gIpv~ 88 (89)
T d1j6ua1 60 DPDLVIKTPAVRDDNPEIVRARMERVPIE 88 (89)
T ss_dssp CCSEEEECTTCCTTCHHHHHHHHTTCCEE
T ss_pred CCCEEEEecCcCCCCHHHHHHHHcCCCcc
Confidence 589999653 2245678899999986
No 67
>d2uubb1 c.23.15.1 (B:7-240) Ribosomal protein S2 {Thermus thermophilus [TaxId: 274]}
Probab=29.30 E-value=46 Score=31.84 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=23.5
Q ss_pred CCcEEEE-CC--CchHHHHHHHcCCcEEEEec
Q 001947 118 KADLVVS-DV--VPVACRAAADAGIRSVCVTN 146 (992)
Q Consensus 118 kPDlVVs-D~--~~~a~~aA~~~gIP~v~is~ 146 (992)
.||+||. |. ...+..=|..+|||+|++.|
T Consensus 152 ~Pd~viv~d~~~~~~Ai~Ea~~l~IPvIaivD 183 (234)
T d2uubb1 152 LPDAIFVVDPTKEAIAVREARKLFIPVIALAD 183 (234)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHHTCCEEEEEC
T ss_pred cceeEEEecCCccHHHHHHHHhhCCCEEEEee
Confidence 4999996 54 66788888999999999944
No 68
>d1xhfa1 c.23.1.1 (A:2-122) Aerobic respiration control protein ArcA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=26.89 E-value=42 Score=28.20 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=26.5
Q ss_pred HHHHHHHcCCCcEEEECCCc---hHHHHH----HHcCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVVP---VACRAA----ADAGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~~---~a~~aA----~~~gIP~v~is~~~ 148 (992)
++.+.+.+.+||+||.|... -+..+. ....+|++.++...
T Consensus 37 ~al~~l~~~~~dlii~D~~mp~~~G~~~~~~~r~~~~~pii~lt~~~ 83 (121)
T d1xhfa1 37 EMHQILSEYDINLVIMDINLPGKNGLLLARELREQANVALMFLTGRD 83 (121)
T ss_dssp HHHHHHHHSCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESCC
T ss_pred HHHHHHHhcCCCEEEeecccCCccCcHHHHHHHhcCCCcEEEEECCC
Confidence 34566778899999999622 233322 33579999887654
No 69
>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}
Probab=26.52 E-value=24 Score=31.00 Aligned_cols=37 Identities=22% Similarity=0.428 Sum_probs=26.1
Q ss_pred CCCCccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeCC
Q 001947 10 SASSKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTGA 53 (992)
Q Consensus 10 ~~~m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~~ 53 (992)
++.|+++.| + | |.|.+= ..+|+.|++.||+|+++...
T Consensus 6 ~~~~~kI~i---I-G-g~G~mG--~~la~~L~~~G~~V~~~d~~ 42 (152)
T d2pv7a2 6 NSDIHKIVI---V-G-GYGKLG--GLFARYLRASGYPISILDRE 42 (152)
T ss_dssp CTTCCCEEE---E-T-TTSHHH--HHHHHHHHTTTCCEEEECTT
T ss_pred CCCCCeEEE---E-c-CCCHHH--HHHHHHHHHcCCCcEecccc
Confidence 567877777 3 2 255543 35788999999999998543
No 70
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=25.06 E-value=23 Score=28.93 Aligned_cols=18 Identities=11% Similarity=0.228 Sum_probs=15.4
Q ss_pred HHHHHHHHHHCCCcEEEE
Q 001947 33 VVEVVRNLISAGHDVHVV 50 (992)
Q Consensus 33 ~laLA~~L~~~GheV~~~ 50 (992)
..+||+.|.++|++|+-.
T Consensus 21 Ms~LA~~L~~~G~~VsGS 38 (96)
T d1p3da1 21 MSGIAEILLNEGYQISGS 38 (96)
T ss_dssp HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHhCCCEEEEE
Confidence 457899999999999865
No 71
>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}
Probab=24.78 E-value=29 Score=27.77 Aligned_cols=78 Identities=17% Similarity=0.232 Sum_probs=44.3
Q ss_pred CCcEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCC--CC---CCCCeE-EcCCCCCHHHHHhhcCEEEecCChh----H
Q 001947 222 DVKLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASD--SQ---LPPNFI-KLPKDAYTPDFMAASDCMLGKIGYG----T 291 (992)
Q Consensus 222 d~~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~--~~---l~~nv~-v~~f~~~~p~lL~aaDlvIt~~G~~----T 291 (992)
++.++++-+|..|. ...+.|...++.+.+..... +. +..+.. ..+. +-.+.+..+|++|..+|.. .
T Consensus 5 ~K~v~ViGlG~sG~--s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~vi~SPGi~~~~~~ 80 (93)
T d2jfga1 5 GKNVVIIGLGLTGL--SCVDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTGS--LNDEWLMAADLIVASPGIALAHPS 80 (93)
T ss_dssp TCCEEEECCSHHHH--HHHHHHHHTTCCCEEEESSSSCTTGGGSCTTSCEEESB--CCHHHHHHCSEEEECTTSCTTSHH
T ss_pred CCEEEEEeECHHHH--HHHHHHHHCCCEEEEeeCCcCchhHHHHhhccceeecc--cchhhhccCCEEEECCCCCCCCHH
Confidence 55666666664443 33444444455444443222 11 333322 2221 1246778999999988864 6
Q ss_pred HHHHHHcCCcEE
Q 001947 292 VSEALAYKLPFV 303 (992)
Q Consensus 292 v~Eal~~GvP~V 303 (992)
+.+|...|+|+|
T Consensus 81 ~~~a~~~gi~ii 92 (93)
T d2jfga1 81 LSAAADAGIEIV 92 (93)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCCeE
Confidence 888999999986
No 72
>d1ys7a2 c.23.1.1 (A:7-127) Transcriptional regulatory protein PrrA, N-terminal domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=24.34 E-value=46 Score=27.90 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=25.4
Q ss_pred HHHHHHHcCCCcEEEECCC-c--hHHHHHH-----HcCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVV-P--VACRAAA-----DAGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~-~--~a~~aA~-----~~gIP~v~is~~~ 148 (992)
++.+++++.+||+||.|.. | -+..+.+ ...+|++.++...
T Consensus 36 eal~~~~~~~~dlvl~D~~mP~~~G~el~~~ir~~~~~~piI~lt~~~ 83 (121)
T d1ys7a2 36 EALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARS 83 (121)
T ss_dssp HHHHHHHHSCCSEEEEESSCSSSCHHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHhCCCCEEEEEeeccCcccHHHHHHHHhcCCCCEEEEEEeeC
Confidence 3455677899999999962 2 1333222 2369998886544
No 73
>d1zesa1 c.23.1.1 (A:3-123) PhoB receiver domain {Escherichia coli [TaxId: 562]}
Probab=23.36 E-value=40 Score=28.26 Aligned_cols=41 Identities=22% Similarity=0.163 Sum_probs=27.1
Q ss_pred HHHHHHHHcCCCcEEEECCCc---hHHHHHHH-------cCCcEEEEecCc
Q 001947 108 KDEVEWLNSIKADLVVSDVVP---VACRAAAD-------AGIRSVCVTNFS 148 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~~---~a~~aA~~-------~gIP~v~is~~~ 148 (992)
.++.+.+++.+||+||.|... -|..+.+. ..+|++.++...
T Consensus 34 ~~al~~l~~~~~dlil~D~~mp~~~G~~l~~~lr~~~~~~~~pvi~lt~~~ 84 (121)
T d1zesa1 34 DSAVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRESMTRDIPVVMLTARG 84 (121)
T ss_dssp HHHHHHSSSSCCSEEEECSSCTTSCHHHHHHHHHHSTTTTTSCEEEEESCC
T ss_pred HHHHHHHHccCCCEEEeecCCCCCCHHHHHHHHHhCccCCCCeEEEEECCC
Confidence 345667788999999999622 23333322 259999887654
No 74
>d2a9pa1 c.23.1.1 (A:2-118) DNA-binding response regulator MicA, N-terminal domain {Streptococcus pneumoniae [TaxId: 1313]}
Probab=23.08 E-value=45 Score=27.74 Aligned_cols=40 Identities=10% Similarity=0.231 Sum_probs=25.6
Q ss_pred HHHHHHHcCCCcEEEECCCc---hHHHHHH----HcCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVVP---VACRAAA----DAGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~~---~a~~aA~----~~gIP~v~is~~~ 148 (992)
++.+.+++.+||+||.|... -|....+ ...+|++.++...
T Consensus 35 eal~~~~~~~~dlillD~~mp~~~G~~~~~~i~~~~~~pvI~lt~~~ 81 (117)
T d2a9pa1 35 EALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 81 (117)
T ss_dssp HHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHTTCCCCEEEEESCC
T ss_pred HHHHHHHhcCCCEEEeccccCCCCccHHHHHHHhCCCCCEEEEecCC
Confidence 34556678899999999622 2333222 2369998886654
No 75
>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}
Probab=22.59 E-value=31 Score=32.75 Aligned_cols=66 Identities=9% Similarity=0.108 Sum_probs=43.2
Q ss_pred cEEEEEcCCCCChhhHHHhhCCCCcEEEEeCCCCCC---CCCCeEEcCCCCCHHHHH---hhcCEEEecCCh
Q 001947 224 KLLILNFGGQPAGWKLKEEYLPSGWKCLVCGASDSQ---LPPNFIKLPKDAYTPDFM---AASDCMLGKIGY 289 (992)
Q Consensus 224 ~~Vlvs~Gg~~~~~~ll~~l~~~~~~~Vv~G~~~~~---l~~nv~v~~f~~~~p~lL---~aaDlvIt~~G~ 289 (992)
++++|++|+.|-+..+.+.|...++.+++++.+.+. ....+...+..+.+..+. ...|++|..+|.
T Consensus 5 K~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~ 76 (234)
T d1o5ia_ 5 KGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG 76 (234)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCcEEEcchHHHHHHHHHHhCCCcEEEecccc
Confidence 579999998887767777787788888887765432 233444444444444333 457888877763
No 76
>d1mb3a_ c.23.1.1 (A:) Cell division response regulator DivK {Caulobacter crescentus [TaxId: 155892]}
Probab=22.40 E-value=35 Score=28.70 Aligned_cols=40 Identities=28% Similarity=0.343 Sum_probs=24.0
Q ss_pred HHHHHHHcCCCcEEEECCC-c--hHHHHHHH-------cCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVV-P--VACRAAAD-------AGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~-~--~a~~aA~~-------~gIP~v~is~~~ 148 (992)
++.+++++.+||+|+.|.. | -|..+++. ..+|++.++...
T Consensus 36 ~al~~~~~~~~dlil~D~~mp~~dG~el~~~ir~~~~~~~iPii~lt~~~ 85 (123)
T d1mb3a_ 36 SALSIARENKPDLILMDIQLPEISGLEVTKWLKEDDDLAHIPVVAVTAFA 85 (123)
T ss_dssp HHHHHHHHHCCSEEEEESBCSSSBHHHHHHHHHHSTTTTTSCEEEEC---
T ss_pred HHHHHHHhCCCCEEEEEeccCCCcHHHHHHHHHhCCCcCCCCeEEEEEec
Confidence 3455667789999999972 2 24433332 358998886543
No 77
>d1ny5a1 c.23.1.1 (A:1-137) Transcriptional activator sigm54 (NtrC1), N-terminal domain {Aquifex aeolicus [TaxId: 63363]}
Probab=22.26 E-value=47 Score=28.52 Aligned_cols=41 Identities=15% Similarity=0.265 Sum_probs=26.8
Q ss_pred HHHHHHHHcCCCcEEEECCC-c--hHHHHH-----HHcCCcEEEEecCc
Q 001947 108 KDEVEWLNSIKADLVVSDVV-P--VACRAA-----ADAGIRSVCVTNFS 148 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~-~--~a~~aA-----~~~gIP~v~is~~~ 148 (992)
.++.+.+++.+||+||.|.. | -|.-+. ....+|+|.+|.+.
T Consensus 34 ~eAl~~l~~~~~dlvilD~~mp~~~G~e~~~~lr~~~~~~piI~lT~~~ 82 (137)
T d1ny5a1 34 KEAYKLLSEKHFNVVLLDLLLPDVNGLEILKWIKERSPETEVIVITGHG 82 (137)
T ss_dssp HHHHHHHHHSCCSEEEEESBCSSSBHHHHHHHHHHHCTTSEEEEEEETT
T ss_pred HHHHHHhhccccccchHHHhhhhhhHHHHHHHHHHhCCCCCEEEEECCC
Confidence 44566778899999999962 1 233222 22369999887654
No 78
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=21.50 E-value=2.1e+02 Score=23.66 Aligned_cols=24 Identities=29% Similarity=0.372 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHCCCcEEEEeCCC
Q 001947 31 TRVVEVVRNLISAGHDVHVVTGAP 54 (992)
Q Consensus 31 ~r~laLA~~L~~~GheV~~~~~~~ 54 (992)
-.++++.+.|.++|++|.++|..+
T Consensus 39 p~v~~~l~~l~~~G~~Iii~T~R~ 62 (149)
T d1ltqa1 39 PMVVELSKMYALMGYQIVVVSGRE 62 (149)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSC
T ss_pred HHHHHHHHHHHhccCeEEEEecCc
Confidence 347799999999999999998865
No 79
>d1peya_ c.23.1.1 (A:) Sporulation response regulator Spo0F {Bacillus subtilis [TaxId: 1423]}
Probab=21.46 E-value=44 Score=27.91 Aligned_cols=40 Identities=20% Similarity=0.333 Sum_probs=25.8
Q ss_pred HHHHHHHcCCCcEEEECCCch---HHHHHH-----HcCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVVPV---ACRAAA-----DAGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~~~---a~~aA~-----~~gIP~v~is~~~ 148 (992)
++.+.+++.+||+|+.|.... |.-+.+ ...+|++.++.+.
T Consensus 36 eal~~~~~~~~dlillD~~mP~~~G~el~~~lr~~~~~~pvi~lt~~~ 83 (119)
T d1peya_ 36 QALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVIIMTAYG 83 (119)
T ss_dssp HHHHHHHHHCCSEEEEESCCTTCCHHHHHHHHHHHCTTCEEEEEESSC
T ss_pred HHHHHHHhCCCCEEEEeccCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 345567788999999997322 333322 2369999887654
No 80
>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}
Probab=20.90 E-value=42 Score=28.44 Aligned_cols=55 Identities=13% Similarity=0.166 Sum_probs=35.6
Q ss_pred HhhcCEEEecCChh------HHHHHHHcCCcEEEEeCCCCCChHHHHHHHHHcCcEEEEecCCCC
Q 001947 277 MAASDCMLGKIGYG------TVSEALAYKLPFVFVRRDYFNEEPFLRNMLEFYQGGVEMIRRDLL 335 (992)
Q Consensus 277 L~aaDlvIt~~G~~------Tv~Eal~~GvP~V~iP~~~~~EQ~~NA~~le~~G~Gi~v~~~~~~ 335 (992)
+..||.+|...+-. +.+-+-.++.|-++... .+ ..+.+.+.+.|+-.++.++...
T Consensus 62 i~~a~~vi~~~~~~~~~~~~~~~~~~~~~~~~iiar~---~~-~~~~~~l~~~Gad~vi~p~~~~ 122 (134)
T d2hmva1 62 IRNFEYVIVAIGANIQASTLTTLLLKELDIPNIWVKA---QN-YYHHKVLEKIGADRIIHPEKDM 122 (134)
T ss_dssp GGGCSEEEECCCSCHHHHHHHHHHHHHTTCSEEEEEC---CS-HHHHHHHHHHTCSEEECHHHHH
T ss_pred CccccEEEEEcCchHHhHHHHHHHHHHcCCCcEEeec---cc-HhHHHHHHHCCCCEEEChHHHH
Confidence 45789877655422 23344566778777652 12 3678889999998888765544
No 81
>d1ccwa_ c.23.6.1 (A:) Glutamate mutase, small subunit {Clostridium cochlearium [TaxId: 1494]}
Probab=20.56 E-value=47 Score=28.83 Aligned_cols=39 Identities=13% Similarity=-0.043 Sum_probs=31.1
Q ss_pred CccEEEEEeccCCCcccHHHHHHHHHHHHHCCCcEEEEeC
Q 001947 13 SKHLVFAYYVTGHGFGHATRVVEVVRNLISAGHDVHVVTG 52 (992)
Q Consensus 13 m~~~~Il~~v~g~G~GHv~r~laLA~~L~~~GheV~~~~~ 52 (992)
|++-+|+.. +-.|-+|..-..-++..|+..|++|.+...
T Consensus 1 ~~k~kVvi~-~~~gD~H~lG~~mva~~l~~~G~~V~~LG~ 39 (137)
T d1ccwa_ 1 MEKKTIVLG-VIGSDCHAVGNKILDHAFTNAGFNVVNIGV 39 (137)
T ss_dssp CCCCEEEEE-EETTCCCCHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEE-ecCCChhHHHHHHHHHHHHHCCCeEEeccc
Confidence 455566544 456789999999999999999999998854
No 82
>d1kgsa2 c.23.1.1 (A:2-123) PhoB receiver domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.26 E-value=63 Score=26.92 Aligned_cols=40 Identities=15% Similarity=0.174 Sum_probs=25.5
Q ss_pred HHHHHHHcCCCcEEEECCC-c--hHHHHHH-----HcCCcEEEEecCc
Q 001947 109 DEVEWLNSIKADLVVSDVV-P--VACRAAA-----DAGIRSVCVTNFS 148 (992)
Q Consensus 109 ~~~~~L~~~kPDlVVsD~~-~--~a~~aA~-----~~gIP~v~is~~~ 148 (992)
++.+.+++.+||+||.|.. | -+..+.+ ...+|++.++...
T Consensus 36 ~al~~l~~~~~dlillD~~mp~~~g~~~~~~lr~~~~~~piI~lt~~~ 83 (122)
T d1kgsa2 36 EGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALS 83 (122)
T ss_dssp HHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHTTCCCCEEEEESSC
T ss_pred HHHHHHHhhCccccccccccccchhHHHHHHHHhcCCCCcEEEEcCCC
Confidence 3455677899999999962 2 1222222 1368998887655
No 83
>d1krwa_ c.23.1.1 (A:) NTRC receiver domain {Salmonella typhimurium [TaxId: 90371]}
Probab=20.21 E-value=41 Score=28.30 Aligned_cols=38 Identities=21% Similarity=0.235 Sum_probs=24.4
Q ss_pred HHHHHcCCCcEEEECCC-c--hHHHHH-----HHcCCcEEEEecCc
Q 001947 111 VEWLNSIKADLVVSDVV-P--VACRAA-----ADAGIRSVCVTNFS 148 (992)
Q Consensus 111 ~~~L~~~kPDlVVsD~~-~--~a~~aA-----~~~gIP~v~is~~~ 148 (992)
.+.+++.+||+||.|.. | -|..+. ....+|+|.++...
T Consensus 40 ~~~l~~~~~dlii~D~~mp~~~G~el~~~l~~~~~~~piI~~t~~~ 85 (123)
T d1krwa_ 40 LAALASKTPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAHS 85 (123)
T ss_dssp HHHHTTCCCSEEEECCSSSSSTTHHHHHHHHHHSSSCCEEESCCCS
T ss_pred HHHHHhCCCCEEEehhhcCCchHHHHHHHHHHhCCCCeEEEEecCC
Confidence 45667889999999962 2 122222 22369998876654
No 84
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=20.18 E-value=2e+02 Score=23.46 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=24.7
Q ss_pred HHHHHHHHcCCCcEEEECCCchHHH----HHHHcCCcEEEE
Q 001947 108 KDEVEWLNSIKADLVVSDVVPVACR----AAADAGIRSVCV 144 (992)
Q Consensus 108 ~~~~~~L~~~kPDlVVsD~~~~a~~----aA~~~gIP~v~i 144 (992)
.+..++|.+.++|+||.=...+... +....++|++.+
T Consensus 52 ~~~~~~l~~~~~~~iViACNTaS~~al~~lr~~~~~PiiGv 92 (105)
T d1b74a1 52 LECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGV 92 (105)
T ss_dssp HHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHSSSCEEES
T ss_pred HHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCEEEe
Confidence 4456788899999999765333222 234568999864
Done!