Query 001949
Match_columns 992
No_of_seqs 362 out of 2877
Neff 9.3
Searched_HMMs 46136
Date Thu Mar 28 13:03:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001949.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001949hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0202 Ca2+ transporting ATPa 100.0 6E-171 1E-175 1412.8 69.3 949 1-970 1-970 (972)
2 TIGR01523 ATPase-IID_K-Na pota 100.0 9E-140 2E-144 1294.0 95.2 930 2-970 5-1049(1053)
3 KOG0204 Calcium transporting A 100.0 1E-140 3E-145 1168.1 56.5 880 8-967 102-1007(1034)
4 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1E-133 3E-138 1245.6 94.1 910 3-969 16-986 (997)
5 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2E-133 5E-138 1233.9 93.3 876 2-969 2-883 (884)
6 COG0474 MgtA Cation transport 100.0 5E-134 1E-138 1232.5 86.6 873 3-964 22-912 (917)
7 TIGR01517 ATPase-IIB_Ca plasma 100.0 6E-131 1E-135 1219.8 89.7 877 8-965 43-938 (941)
8 TIGR01116 ATPase-IIA1_Ca sarco 100.0 7E-130 1E-134 1205.2 89.9 900 53-967 1-917 (917)
9 PRK15122 magnesium-transportin 100.0 1E-129 3E-134 1191.6 87.3 848 2-969 25-899 (903)
10 PRK10517 magnesium-transportin 100.0 2E-128 3E-133 1179.9 86.2 839 2-969 47-899 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 2E-127 3E-132 1173.4 88.3 835 2-967 13-861 (867)
12 KOG0203 Na+/K+ ATPase, alpha s 100.0 2E-130 4E-135 1085.7 40.3 908 3-969 38-1008(1019)
13 TIGR01657 P-ATPase-V P-type AT 100.0 1E-114 2E-119 1084.3 77.1 831 21-946 137-1048(1054)
14 TIGR01647 ATPase-IIIA_H plasma 100.0 5E-113 1E-117 1033.5 81.3 745 23-926 1-753 (755)
15 TIGR01652 ATPase-Plipid phosph 100.0 2E-109 4E-114 1041.3 65.7 889 36-979 1-1057(1057)
16 PLN03190 aminophospholipid tra 100.0 2E-106 4E-111 999.0 72.6 885 35-981 86-1154(1178)
17 KOG0208 Cation transport ATPas 100.0 1.5E-98 3E-103 845.1 57.8 885 21-981 158-1135(1140)
18 KOG0206 P-type ATPase [General 100.0 3.3E-98 7E-103 888.9 30.4 896 32-981 28-1089(1151)
19 KOG0210 P-type ATPase [Inorgan 100.0 2.8E-93 6.1E-98 769.5 36.7 861 31-979 74-1051(1051)
20 PRK14010 potassium-transportin 100.0 2.1E-88 4.5E-93 788.3 59.8 553 55-771 28-589 (673)
21 PRK01122 potassium-transportin 100.0 4.8E-86 1E-90 769.3 61.3 554 55-768 29-590 (679)
22 KOG0205 Plasma membrane H+-tra 100.0 9.1E-85 2E-89 700.3 37.0 675 5-800 19-697 (942)
23 TIGR01497 kdpB K+-transporting 100.0 3.8E-82 8.3E-87 734.5 60.4 557 55-770 28-593 (675)
24 KOG0209 P-type ATPase [Inorgan 100.0 5.2E-80 1.1E-84 679.0 47.9 838 22-967 161-1149(1160)
25 COG2217 ZntA Cation transport 100.0 1.1E-75 2.3E-80 681.3 54.5 505 86-764 173-678 (713)
26 PRK11033 zntA zinc/cadmium/mer 100.0 1.9E-72 4.1E-77 677.5 58.1 500 86-764 205-707 (741)
27 TIGR01494 ATPase_P-type ATPase 100.0 2.6E-72 5.6E-77 657.0 52.7 478 94-767 3-483 (499)
28 KOG0207 Cation transport ATPas 100.0 2.6E-72 5.6E-77 634.5 42.0 560 83-800 337-902 (951)
29 TIGR01525 ATPase-IB_hvy heavy 100.0 1.1E-70 2.4E-75 648.4 53.0 508 86-764 17-526 (556)
30 TIGR01512 ATPase-IB2_Cd heavy 100.0 6.7E-70 1.4E-74 637.1 50.2 488 86-765 17-506 (536)
31 TIGR01511 ATPase-IB1_Cu copper 100.0 7.8E-69 1.7E-73 629.8 57.7 491 86-763 53-544 (562)
32 PRK10671 copA copper exporting 100.0 1.6E-67 3.6E-72 649.1 59.8 505 87-763 286-790 (834)
33 COG2216 KdpB High-affinity K+ 100.0 1.8E-59 3.9E-64 494.7 37.2 515 95-767 74-591 (681)
34 PF00122 E1-E2_ATPase: E1-E2 A 100.0 1.3E-34 2.7E-39 305.3 22.4 228 93-337 2-230 (230)
35 KOG4383 Uncharacterized conser 100.0 4.3E-26 9.3E-31 247.1 34.9 461 511-981 697-1345(1354)
36 PF00689 Cation_ATPase_C: Cati 99.9 1E-21 2.2E-26 198.9 14.2 175 774-965 1-182 (182)
37 PF00702 Hydrolase: haloacid d 99.9 1.8E-21 4E-26 203.4 11.5 97 580-705 115-215 (215)
38 COG4087 Soluble P-type ATPase 99.6 9E-15 2E-19 128.2 10.7 125 580-736 18-145 (152)
39 PF13246 Hydrolase_like2: Puta 99.5 1.1E-14 2.4E-19 127.0 7.8 91 415-524 1-91 (91)
40 PF00690 Cation_ATPase_N: Cati 99.5 6.6E-14 1.4E-18 115.7 8.1 69 4-72 1-69 (69)
41 COG0561 Cof Predicted hydrolas 99.3 1.8E-11 3.9E-16 131.9 13.9 151 589-739 16-259 (264)
42 PRK10513 sugar phosphate phosp 99.3 2.1E-11 4.6E-16 132.0 13.5 67 673-739 196-266 (270)
43 PRK15126 thiamin pyrimidine py 99.3 1.8E-11 3.9E-16 132.5 12.8 156 580-738 10-259 (272)
44 PRK10976 putative hydrolase; P 99.3 2.7E-11 5.9E-16 130.8 13.9 148 591-738 18-261 (266)
45 PRK01158 phosphoglycolate phos 99.3 2.1E-11 4.6E-16 128.6 12.3 149 590-738 17-226 (230)
46 TIGR01487 SPP-like sucrose-pho 99.2 3.4E-11 7.3E-16 125.4 11.4 146 592-737 18-215 (215)
47 PLN02887 hydrolase family prot 99.2 1.4E-10 2.9E-15 135.0 13.8 66 673-738 507-576 (580)
48 TIGR01482 SPP-subfamily Sucros 99.2 1.6E-10 3.6E-15 121.4 13.2 147 592-738 15-222 (225)
49 PF08282 Hydrolase_3: haloacid 99.2 1.7E-10 3.7E-15 123.7 12.8 148 590-737 13-254 (254)
50 PRK10530 pyridoxal phosphate ( 99.2 2.3E-10 4.9E-15 124.2 12.9 66 673-738 199-268 (272)
51 smart00831 Cation_ATPase_N Cat 99.1 1.1E-10 2.3E-15 95.1 7.1 61 15-75 2-62 (64)
52 PRK11133 serB phosphoserine ph 99.1 6.2E-10 1.3E-14 121.2 11.9 129 592-738 181-316 (322)
53 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 1.8E-09 4E-14 115.6 14.3 147 593-739 17-254 (256)
54 TIGR02137 HSK-PSP phosphoserin 99.0 1.8E-09 3.8E-14 110.1 11.2 127 592-740 68-198 (203)
55 PRK03669 mannosyl-3-phosphogly 99.0 4.3E-09 9.3E-14 113.6 14.7 157 579-738 14-265 (271)
56 TIGR02726 phenyl_P_delta pheny 99.0 1.6E-09 3.4E-14 106.3 10.1 106 599-733 41-146 (169)
57 TIGR00099 Cof-subfamily Cof su 99.0 1.8E-09 3.8E-14 115.9 11.2 146 592-737 16-256 (256)
58 TIGR01670 YrbI-phosphatas 3-de 98.9 4.4E-09 9.6E-14 102.6 10.1 110 600-738 36-146 (154)
59 PRK00192 mannosyl-3-phosphogly 98.9 2.5E-08 5.4E-13 107.8 14.0 149 590-738 19-267 (273)
60 COG0560 SerB Phosphoserine pho 98.8 1.4E-08 3.1E-13 103.9 10.0 117 591-726 76-200 (212)
61 TIGR02471 sucr_syn_bact_C sucr 98.8 4E-08 8.7E-13 103.9 11.9 143 596-739 19-233 (236)
62 TIGR00338 serB phosphoserine p 98.8 2.5E-08 5.5E-13 104.2 9.8 126 592-736 85-218 (219)
63 COG1778 Low specificity phosph 98.7 3.9E-08 8.4E-13 90.5 7.7 114 599-745 42-163 (170)
64 PRK09484 3-deoxy-D-manno-octul 98.7 5.9E-08 1.3E-12 97.7 9.7 98 599-729 55-156 (183)
65 TIGR01485 SPP_plant-cyano sucr 98.5 6.1E-07 1.3E-11 95.6 12.8 150 590-739 19-245 (249)
66 PRK13582 thrH phosphoserine ph 98.5 6.8E-07 1.5E-11 92.4 10.7 125 592-737 68-195 (205)
67 KOG1615 Phosphoserine phosphat 98.5 1.1E-07 2.5E-12 90.4 3.7 109 592-711 88-199 (227)
68 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 8.4E-07 1.8E-11 91.4 10.2 117 592-722 80-200 (201)
69 TIGR02461 osmo_MPG_phos mannos 98.4 1.5E-06 3.2E-11 90.6 10.4 50 590-639 13-62 (225)
70 PLN02382 probable sucrose-phos 98.3 3.2E-06 6.9E-11 96.0 12.0 147 592-738 28-257 (413)
71 PRK08238 hypothetical protein; 98.3 0.00018 3.8E-09 83.0 25.4 99 592-716 72-170 (479)
72 TIGR02463 MPGP_rel mannosyl-3- 98.3 5.6E-06 1.2E-10 86.6 12.3 48 593-640 17-65 (221)
73 TIGR03333 salvage_mtnX 2-hydro 98.2 7.8E-06 1.7E-10 84.9 11.6 111 591-711 69-182 (214)
74 PF12710 HAD: haloacid dehalog 98.2 2.8E-06 6.1E-11 86.7 7.2 92 595-702 92-192 (192)
75 PLN02954 phosphoserine phospha 98.2 1.4E-05 3E-10 83.8 12.3 125 592-735 84-221 (224)
76 PRK12702 mannosyl-3-phosphogly 98.2 1.3E-05 2.8E-10 83.9 11.2 51 590-640 16-66 (302)
77 PRK09552 mtnX 2-hydroxy-3-keto 98.1 1.2E-05 2.6E-10 83.9 10.0 109 592-710 74-185 (219)
78 COG0546 Gph Predicted phosphat 98.1 1.8E-05 3.9E-10 82.5 11.1 126 590-737 87-217 (220)
79 PRK13222 phosphoglycolate phos 98.1 2.2E-05 4.9E-10 82.4 11.4 127 591-739 92-223 (226)
80 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 1.4E-05 3.1E-10 82.3 8.8 105 590-711 85-197 (202)
81 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 1.4E-05 3E-10 81.2 8.6 114 591-709 71-186 (188)
82 PRK14502 bifunctional mannosyl 98.0 3.4E-05 7.5E-10 89.9 12.1 44 592-635 433-476 (694)
83 TIGR01488 HAD-SF-IB Haloacid D 98.0 1.2E-05 2.6E-10 80.9 7.1 96 593-704 74-177 (177)
84 cd01427 HAD_like Haloacid deha 98.0 1.8E-05 3.8E-10 75.5 7.3 118 588-709 20-138 (139)
85 TIGR01454 AHBA_synth_RP 3-amin 97.9 3.5E-05 7.5E-10 79.6 9.3 124 592-737 75-203 (205)
86 PTZ00174 phosphomannomutase; P 97.9 6.2E-05 1.4E-09 79.9 10.4 54 672-725 187-245 (247)
87 PRK10187 trehalose-6-phosphate 97.9 9.5E-05 2.1E-09 79.2 11.4 138 592-737 36-240 (266)
88 PRK13223 phosphoglycolate phos 97.8 0.00014 2.9E-09 78.5 10.5 125 591-737 100-229 (272)
89 PRK13288 pyrophosphatase PpaX; 97.7 0.00017 3.7E-09 75.0 10.0 124 592-737 82-210 (214)
90 TIGR01449 PGP_bact 2-phosphogl 97.7 0.00016 3.4E-09 75.2 9.2 116 592-727 85-205 (213)
91 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00042 9.1E-09 73.1 12.0 129 591-737 120-273 (277)
92 PF05116 S6PP: Sucrose-6F-phos 97.6 0.0002 4.4E-09 75.7 9.5 68 672-739 164-244 (247)
93 PRK10826 2-deoxyglucose-6-phos 97.6 0.00026 5.6E-09 74.0 8.9 117 591-727 91-211 (222)
94 TIGR01484 HAD-SF-IIB HAD-super 97.5 0.00042 9E-09 71.4 9.7 39 592-630 17-55 (204)
95 PLN02770 haloacid dehalogenase 97.5 0.00063 1.4E-08 72.3 10.7 119 592-730 108-230 (248)
96 PLN03243 haloacid dehalogenase 97.4 0.00055 1.2E-08 73.0 9.4 116 592-727 109-226 (260)
97 PRK11590 hypothetical protein; 97.4 0.00074 1.6E-08 69.8 9.9 106 592-712 95-203 (211)
98 TIGR01545 YfhB_g-proteo haloac 97.4 0.00065 1.4E-08 69.9 9.3 106 592-711 94-201 (210)
99 PRK13226 phosphoglycolate phos 97.4 0.00075 1.6E-08 70.9 9.8 116 592-727 95-216 (229)
100 PRK13225 phosphoglycolate phos 97.4 0.0014 3E-08 70.4 11.5 121 592-737 142-267 (273)
101 PRK14501 putative bifunctional 97.3 0.0012 2.6E-08 81.6 12.3 151 579-737 499-720 (726)
102 TIGR03351 PhnX-like phosphonat 97.3 0.0015 3.2E-08 68.2 10.4 116 591-726 86-210 (220)
103 TIGR01422 phosphonatase phosph 97.2 0.0021 4.6E-08 68.7 11.3 98 592-708 99-197 (253)
104 PRK13478 phosphonoacetaldehyde 97.2 0.0021 4.5E-08 69.3 11.2 96 592-706 101-197 (267)
105 PRK11009 aphA acid phosphatase 97.2 0.0011 2.5E-08 68.8 8.1 89 591-708 113-207 (237)
106 PRK11587 putative phosphatase; 97.2 0.0023 4.9E-08 66.7 10.5 115 592-727 83-199 (218)
107 TIGR01672 AphA HAD superfamily 97.2 0.0011 2.3E-08 69.0 7.7 89 592-707 114-206 (237)
108 TIGR02253 CTE7 HAD superfamily 97.1 0.0015 3.2E-08 68.3 8.6 100 592-711 94-195 (221)
109 TIGR01548 HAD-SF-IA-hyp1 haloa 97.1 0.0014 3.1E-08 67.0 7.9 94 590-704 104-197 (197)
110 PLN02575 haloacid dehalogenase 97.1 0.0026 5.7E-08 70.5 10.2 116 592-727 216-333 (381)
111 COG4030 Uncharacterized protei 97.1 0.0026 5.7E-08 62.5 8.6 143 592-738 83-262 (315)
112 smart00775 LNS2 LNS2 domain. T 97.0 0.0055 1.2E-07 59.8 10.3 103 590-707 25-141 (157)
113 TIGR01428 HAD_type_II 2-haloal 97.0 0.0025 5.4E-08 65.3 8.3 98 592-709 92-189 (198)
114 PRK14988 GMP/IMP nucleotidase; 96.9 0.0024 5.3E-08 66.6 7.9 101 592-712 93-195 (224)
115 COG4359 Uncharacterized conser 96.9 0.0015 3.3E-08 62.2 5.5 105 592-709 73-183 (220)
116 TIGR01662 HAD-SF-IIIA HAD-supe 96.8 0.0044 9.6E-08 58.7 8.2 93 591-707 24-126 (132)
117 PHA02530 pseT polynucleotide k 96.8 0.0039 8.4E-08 68.6 8.6 109 588-709 183-293 (300)
118 PLN02779 haloacid dehalogenase 96.8 0.0067 1.5E-07 65.8 10.1 119 592-728 144-265 (286)
119 PRK06698 bifunctional 5'-methy 96.8 0.0069 1.5E-07 70.7 10.8 121 592-737 330-453 (459)
120 TIGR01990 bPGM beta-phosphoglu 96.6 0.0035 7.7E-08 63.3 6.3 95 592-708 87-181 (185)
121 TIGR01685 MDP-1 magnesium-depe 96.6 0.0089 1.9E-07 59.0 8.8 114 580-710 33-155 (174)
122 PRK08942 D,D-heptose 1,7-bisph 96.6 0.014 3E-07 58.7 10.5 125 592-737 29-176 (181)
123 PLN02940 riboflavin kinase 96.6 0.007 1.5E-07 68.5 9.0 116 592-727 93-212 (382)
124 PF13419 HAD_2: Haloacid dehal 96.6 0.0033 7.2E-08 62.6 5.7 98 591-708 76-173 (176)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.5 0.0044 9.6E-08 62.6 6.3 96 591-708 87-182 (185)
126 TIGR01509 HAD-SF-IA-v3 haloaci 96.5 0.0077 1.7E-07 60.6 8.0 95 592-707 85-179 (183)
127 COG3769 Predicted hydrolase (H 96.5 0.022 4.7E-07 56.3 10.1 37 596-632 27-63 (274)
128 TIGR02254 YjjG/YfnB HAD superf 96.4 0.0095 2.1E-07 62.3 8.4 114 592-726 97-215 (224)
129 TIGR00213 GmhB_yaeD D,D-heptos 96.4 0.015 3.2E-07 58.3 8.8 124 593-727 27-170 (176)
130 TIGR01668 YqeG_hyp_ppase HAD s 96.4 0.0087 1.9E-07 59.4 7.0 89 591-708 42-132 (170)
131 PRK06769 hypothetical protein; 96.3 0.0073 1.6E-07 60.2 6.4 112 579-709 11-134 (173)
132 PRK09449 dUMP phosphatase; Pro 96.3 0.014 3E-07 61.1 8.6 123 592-737 95-222 (224)
133 PLN02811 hydrolase 96.0 0.019 4E-07 59.9 8.0 99 591-709 77-181 (220)
134 TIGR02252 DREG-2 REG-2-like, H 96.0 0.016 3.5E-07 59.5 7.2 95 592-707 105-200 (203)
135 TIGR01656 Histidinol-ppas hist 95.9 0.015 3.3E-07 56.2 6.2 101 592-709 27-142 (147)
136 COG2179 Predicted hydrolase of 95.8 0.032 6.9E-07 53.0 7.4 85 591-706 45-132 (175)
137 TIGR01691 enolase-ppase 2,3-di 95.8 0.03 6.5E-07 57.8 8.0 100 589-710 92-194 (220)
138 TIGR01533 lipo_e_P4 5'-nucleot 95.7 0.049 1.1E-06 57.7 9.2 87 590-702 116-205 (266)
139 TIGR01681 HAD-SF-IIIC HAD-supe 95.6 0.031 6.6E-07 52.6 6.8 88 592-703 29-126 (128)
140 PF06888 Put_Phosphatase: Puta 95.6 0.047 1E-06 56.5 8.5 104 592-701 71-186 (234)
141 TIGR01549 HAD-SF-IA-v1 haloaci 95.6 0.032 6.9E-07 54.4 7.1 90 593-705 65-154 (154)
142 TIGR01675 plant-AP plant acid 95.5 0.068 1.5E-06 55.0 9.3 81 591-699 119-210 (229)
143 smart00577 CPDc catalytic doma 95.5 0.012 2.7E-07 56.8 3.8 97 590-709 43-139 (148)
144 TIGR01261 hisB_Nterm histidino 95.5 0.029 6.3E-07 55.0 6.1 97 592-709 29-144 (161)
145 PLN02919 haloacid dehalogenase 95.4 0.065 1.4E-06 68.6 10.5 135 592-745 161-299 (1057)
146 PLN02423 phosphomannomutase 95.0 0.17 3.8E-06 53.5 10.9 41 672-713 188-233 (245)
147 TIGR01664 DNA-3'-Pase DNA 3'-p 95.0 0.068 1.5E-06 52.7 7.2 94 593-708 43-158 (166)
148 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.9 0.15 3.3E-06 53.9 10.2 93 585-705 17-115 (242)
149 PRK05446 imidazole glycerol-ph 94.8 0.065 1.4E-06 59.3 7.0 101 591-709 29-145 (354)
150 TIGR01686 FkbH FkbH-like domai 94.7 0.073 1.6E-06 58.9 7.4 94 592-710 31-128 (320)
151 TIGR02247 HAD-1A3-hyp Epoxide 94.7 0.043 9.4E-07 56.7 5.2 98 591-708 93-192 (211)
152 PRK09456 ?-D-glucose-1-phospha 94.6 0.073 1.6E-06 54.4 6.6 98 592-709 84-182 (199)
153 PLN02205 alpha,alpha-trehalose 94.5 0.17 3.7E-06 62.9 10.6 51 578-628 602-653 (854)
154 PLN03017 trehalose-phosphatase 94.5 0.46 1E-05 52.4 12.7 48 578-626 117-166 (366)
155 PF13344 Hydrolase_6: Haloacid 94.3 0.069 1.5E-06 47.7 4.9 89 585-706 7-100 (101)
156 PRK10563 6-phosphogluconate ph 94.0 0.068 1.5E-06 55.7 4.9 97 592-710 88-184 (221)
157 TIGR00685 T6PP trehalose-phosp 93.9 0.1 2.2E-06 55.3 6.1 66 668-737 162-239 (244)
158 PRK10725 fructose-1-P/6-phosph 93.5 0.17 3.6E-06 51.2 6.6 93 594-708 90-182 (188)
159 PF09419 PGP_phosphatase: Mito 93.4 0.28 6E-06 47.9 7.5 86 590-705 57-157 (168)
160 PLN02645 phosphoglycolate phos 93.1 0.24 5.1E-06 54.6 7.4 48 585-632 37-87 (311)
161 TIGR01993 Pyr-5-nucltdase pyri 93.0 0.32 7E-06 48.9 7.8 98 592-708 84-181 (184)
162 COG0637 Predicted phosphatase/ 92.9 0.33 7.1E-06 50.5 7.9 100 591-710 85-184 (221)
163 PRK10444 UMP phosphatase; Prov 92.7 0.54 1.2E-05 49.7 9.2 45 585-629 10-54 (248)
164 PF08235 LNS2: LNS2 (Lipin/Ned 92.4 0.77 1.7E-05 44.2 8.8 101 591-707 26-141 (157)
165 KOG3120 Predicted haloacid deh 92.3 0.15 3.2E-06 50.8 3.9 116 592-711 84-209 (256)
166 PHA02597 30.2 hypothetical pro 92.2 0.25 5.3E-06 50.4 5.8 96 592-709 74-171 (197)
167 TIGR01457 HAD-SF-IIA-hyp2 HAD- 92.1 0.88 1.9E-05 48.3 10.1 50 585-634 10-62 (249)
168 PLN02177 glycerol-3-phosphate 91.7 0.89 1.9E-05 53.0 10.1 100 593-712 111-215 (497)
169 PLN02580 trehalose-phosphatase 91.6 0.32 7E-06 54.2 6.1 62 672-737 300-373 (384)
170 KOG3040 Predicted sugar phosph 91.3 0.84 1.8E-05 45.0 7.7 52 581-632 12-66 (262)
171 TIGR01689 EcbF-BcbF capsule bi 90.6 1 2.2E-05 41.8 7.4 71 591-661 23-120 (126)
172 PF03767 Acid_phosphat_B: HAD 89.2 0.32 7E-06 50.7 3.3 89 591-700 114-207 (229)
173 PRK10748 flavin mononucleotide 88.6 0.81 1.8E-05 48.2 6.0 93 592-710 113-206 (238)
174 TIGR01458 HAD-SF-IIA-hyp3 HAD- 87.9 1.3 2.7E-05 47.3 6.9 40 593-632 22-64 (257)
175 COG3700 AphA Acid phosphatase 87.7 1.4 3E-05 42.3 6.1 90 593-710 115-210 (237)
176 COG1011 Predicted hydrolase (H 87.6 1.5 3.2E-05 45.8 7.2 94 591-707 98-194 (229)
177 TIGR01680 Veg_Stor_Prot vegeta 87.4 3.5 7.5E-05 43.5 9.4 80 590-698 143-235 (275)
178 COG0241 HisB Histidinol phosph 85.1 2.7 5.8E-05 41.6 6.9 99 593-710 32-146 (181)
179 PF05822 UMPH-1: Pyrimidine 5' 85.1 4 8.6E-05 42.4 8.4 134 591-737 89-241 (246)
180 TIGR01493 HAD-SF-IA-v2 Haloaci 84.1 1.2 2.5E-05 44.4 4.1 86 592-704 90-175 (175)
181 TIGR01684 viral_ppase viral ph 83.9 2 4.3E-05 45.7 5.7 43 593-635 146-189 (301)
182 TIGR01452 PGP_euk phosphoglyco 83.0 2.4 5.2E-05 45.9 6.2 47 587-633 13-62 (279)
183 COG0647 NagD Predicted sugar p 82.5 3.7 8E-05 43.6 7.1 112 584-729 16-130 (269)
184 PF02358 Trehalose_PPase: Treh 81.8 5.9 0.00013 41.5 8.5 62 666-727 158-233 (235)
185 COG1877 OtsB Trehalose-6-phosp 81.6 7.7 0.00017 41.1 9.1 132 588-720 36-237 (266)
186 PHA03398 viral phosphatase sup 80.1 3.4 7.4E-05 44.1 5.8 42 593-634 148-190 (303)
187 PLN02151 trehalose-phosphatase 79.6 14 0.0003 40.9 10.5 48 579-627 105-154 (354)
188 TIGR02251 HIF-SF_euk Dullard-l 78.3 1.9 4E-05 42.4 3.1 95 588-709 38-136 (162)
189 TIGR01663 PNK-3'Pase polynucle 78.0 5.5 0.00012 46.8 7.3 40 593-632 198-249 (526)
190 TIGR02244 HAD-IG-Ncltidse HAD 74.0 9.3 0.0002 42.2 7.4 106 594-706 186-317 (343)
191 PRK14194 bifunctional 5,10-met 72.0 22 0.00048 38.4 9.4 139 589-727 12-209 (301)
192 PF13242 Hydrolase_like: HAD-h 71.3 5.6 0.00012 33.1 3.9 57 671-727 7-71 (75)
193 TIGR01460 HAD-SF-IIA Haloacid 67.4 23 0.00049 37.2 8.4 48 585-632 7-58 (236)
194 TIGR01458 HAD-SF-IIA-hyp3 HAD- 66.4 5.7 0.00012 42.3 3.7 123 594-735 122-252 (257)
195 PRK14188 bifunctional 5,10-met 64.5 34 0.00075 37.0 9.1 62 666-727 137-208 (296)
196 KOG3085 Predicted hydrolase (H 62.4 20 0.00043 37.3 6.5 106 593-719 114-221 (237)
197 PF12689 Acid_PPase: Acid Phos 61.8 22 0.00048 35.0 6.4 97 592-709 45-146 (169)
198 PRK14174 bifunctional 5,10-met 61.6 39 0.00085 36.5 8.8 62 666-727 138-213 (295)
199 TIGR01456 CECR5 HAD-superfamil 61.4 36 0.00079 37.6 8.9 48 585-632 9-64 (321)
200 TIGR01657 P-ATPase-V P-type AT 60.6 2.7E+02 0.0059 36.5 17.8 231 94-359 197-450 (1054)
201 TIGR01459 HAD-SF-IIA-hyp4 HAD- 60.5 8 0.00017 40.8 3.4 96 594-708 140-237 (242)
202 PRK14170 bifunctional 5,10-met 60.1 45 0.00097 35.8 8.8 46 590-635 11-65 (284)
203 PLN03190 aminophospholipid tra 59.8 1.3E+02 0.0029 39.5 14.7 96 53-164 103-198 (1178)
204 PRK14169 bifunctional 5,10-met 59.4 65 0.0014 34.6 9.9 138 590-727 10-206 (282)
205 COG2503 Predicted secreted aci 58.4 46 0.00099 34.3 7.9 86 592-703 122-211 (274)
206 PRK14182 bifunctional 5,10-met 57.1 59 0.0013 34.8 9.1 45 590-634 10-63 (282)
207 COG0474 MgtA Cation transport 56.6 2E+02 0.0042 37.0 15.3 186 142-342 145-343 (917)
208 PRK14179 bifunctional 5,10-met 56.5 53 0.0011 35.3 8.6 62 666-727 137-208 (284)
209 TIGR01452 PGP_euk phosphoglyco 56.0 67 0.0015 34.6 9.7 111 579-709 132-244 (279)
210 TIGR01517 ATPase-IIB_Ca plasma 55.8 88 0.0019 40.3 12.2 21 131-151 186-206 (941)
211 PRK14184 bifunctional 5,10-met 54.6 86 0.0019 33.7 9.8 62 666-727 136-211 (286)
212 TIGR01652 ATPase-Plipid phosph 54.2 2.7E+02 0.0059 36.5 16.4 247 54-319 18-323 (1057)
213 PRK14166 bifunctional 5,10-met 53.5 64 0.0014 34.6 8.6 62 666-727 136-207 (282)
214 PF00389 2-Hacid_dh: D-isomer 53.1 1.9E+02 0.0042 26.9 11.2 36 675-711 52-89 (133)
215 PRK14186 bifunctional 5,10-met 52.0 76 0.0016 34.3 9.0 62 666-727 137-208 (297)
216 PRK14172 bifunctional 5,10-met 51.6 91 0.002 33.4 9.4 62 666-727 137-208 (278)
217 PRK14167 bifunctional 5,10-met 51.4 80 0.0017 34.2 9.0 138 590-727 11-211 (297)
218 PRK14191 bifunctional 5,10-met 51.2 74 0.0016 34.2 8.7 62 666-727 136-207 (285)
219 PRK14190 bifunctional 5,10-met 51.1 98 0.0021 33.3 9.6 63 665-727 136-208 (284)
220 PRK14189 bifunctional 5,10-met 50.1 2.2E+02 0.0047 30.7 12.0 166 534-727 10-208 (285)
221 PF06570 DUF1129: Protein of u 49.4 1.4E+02 0.003 30.5 10.3 10 961-970 193-202 (206)
222 PLN02897 tetrahydrofolate dehy 48.6 1.3E+02 0.0029 33.1 10.2 63 665-727 192-264 (345)
223 PTZ00445 p36-lilke protein; Pr 47.5 62 0.0013 32.9 6.9 30 592-621 75-104 (219)
224 TIGR01522 ATPase-IIA2_Ca golgi 45.1 2.3E+02 0.005 36.3 13.4 20 132-151 138-157 (884)
225 PRK11507 ribosome-associated p 44.6 28 0.0006 28.5 3.2 26 127-152 38-63 (70)
226 PF13380 CoA_binding_2: CoA bi 43.6 27 0.00058 32.0 3.5 41 592-632 63-104 (116)
227 PRK14193 bifunctional 5,10-met 41.7 1.2E+02 0.0026 32.7 8.4 62 666-727 137-210 (284)
228 PF06506 PrpR_N: Propionate ca 41.1 1.4E+02 0.0029 29.7 8.5 108 595-749 64-172 (176)
229 PLN02616 tetrahydrofolate dehy 40.8 1.6E+02 0.0035 32.7 9.4 62 666-727 210-281 (364)
230 PRK14183 bifunctional 5,10-met 38.4 2.1E+02 0.0045 30.8 9.6 62 666-727 136-207 (281)
231 TIGR02250 FCP1_euk FCP1-like p 38.3 42 0.00091 32.6 4.2 43 590-633 56-98 (156)
232 PF13275 S4_2: S4 domain; PDB: 37.9 16 0.00035 29.4 1.0 25 127-151 34-58 (65)
233 PRK14187 bifunctional 5,10-met 37.5 1.8E+02 0.0038 31.5 9.0 63 665-727 138-210 (294)
234 TIGR01524 ATPase-IIIB_Mg magne 37.4 5.4E+02 0.012 32.9 14.9 36 145-181 139-174 (867)
235 PRK14175 bifunctional 5,10-met 37.2 69 0.0015 34.5 5.9 46 589-634 11-65 (286)
236 PRK05585 yajC preprotein trans 36.1 96 0.0021 27.9 5.7 14 106-119 37-50 (106)
237 PF03120 DNA_ligase_OB: NAD-de 35.7 16 0.00035 30.9 0.7 23 136-158 44-67 (82)
238 PRK14177 bifunctional 5,10-met 35.4 2.8E+02 0.006 29.9 10.0 167 534-727 10-209 (284)
239 CHL00200 trpA tryptophan synth 35.4 2.2E+02 0.0047 30.4 9.3 32 671-702 187-218 (263)
240 KOG2914 Predicted haloacid-hal 35.3 1E+02 0.0022 31.9 6.5 100 592-710 92-194 (222)
241 TIGR00739 yajC preprotein tran 35.2 94 0.002 26.6 5.3 13 141-153 37-49 (84)
242 PRK10517 magnesium-transportin 34.3 9.1E+02 0.02 31.0 16.1 86 93-185 124-212 (902)
243 cd00860 ThrRS_anticodon ThrRS 33.7 1.1E+02 0.0023 26.1 5.7 48 586-633 6-54 (91)
244 KOG3109 Haloacid dehalogenase- 32.9 1.9E+02 0.004 29.6 7.6 108 585-709 92-202 (244)
245 TIGR01647 ATPase-IIIA_H plasma 32.8 5.2E+02 0.011 32.4 13.5 163 144-323 99-264 (755)
246 PRK14171 bifunctional 5,10-met 32.4 6.3E+02 0.014 27.3 12.1 166 534-727 9-209 (288)
247 TIGR01116 ATPase-IIA1_Ca sarco 32.2 1.2E+03 0.026 30.0 17.7 77 94-181 40-116 (917)
248 PRK14185 bifunctional 5,10-met 31.5 1.3E+02 0.0027 32.6 6.7 62 666-727 136-211 (293)
249 cd05017 SIS_PGI_PMI_1 The memb 31.0 95 0.0021 28.4 5.2 39 591-631 53-91 (119)
250 COG1188 Ribosome-associated he 30.4 51 0.0011 29.0 2.9 28 127-155 35-62 (100)
251 PF05761 5_nucleotid: 5' nucle 30.2 68 0.0015 37.0 4.8 106 594-703 185-314 (448)
252 PF03904 DUF334: Domain of unk 30.0 1.1E+02 0.0025 31.1 5.6 12 958-969 217-228 (230)
253 PF12368 DUF3650: Protein of u 29.6 45 0.00097 21.8 1.8 15 21-35 13-27 (28)
254 PF01455 HupF_HypC: HupF/HypC 29.3 1.1E+02 0.0024 24.9 4.6 32 123-154 16-50 (68)
255 PF15584 Imm44: Immunity prote 29.3 26 0.00057 30.0 0.9 19 144-162 13-31 (94)
256 PRK14180 bifunctional 5,10-met 29.1 1.4E+02 0.0031 32.0 6.6 62 666-727 137-208 (282)
257 PLN02591 tryptophan synthase 28.8 3.9E+02 0.0084 28.3 9.8 99 591-712 114-219 (250)
258 COG0309 HypE Hydrogenase matur 28.6 3.2E+02 0.007 30.0 9.1 85 586-693 219-307 (339)
259 KOG2882 p-Nitrophenyl phosphat 27.8 76 0.0016 34.0 4.2 48 585-632 31-81 (306)
260 PF00122 E1-E2_ATPase: E1-E2 A 27.2 6.2E+02 0.013 25.9 11.3 205 97-322 3-211 (230)
261 PRK10792 bifunctional 5,10-met 27.0 3.2E+02 0.0069 29.5 8.8 141 584-727 36-209 (285)
262 TIGR01106 ATPase-IIC_X-K sodiu 26.3 1.6E+03 0.034 29.3 17.8 36 145-181 149-184 (997)
263 cd04728 ThiG Thiazole synthase 25.7 8E+02 0.017 25.8 11.2 50 579-628 91-143 (248)
264 PF12710 HAD: haloacid dehalog 25.6 34 0.00074 34.1 1.3 13 344-356 1-13 (192)
265 PRK14173 bifunctional 5,10-met 24.7 3.9E+02 0.0084 28.9 8.9 62 666-727 134-205 (287)
266 PF03129 HGTP_anticodon: Antic 24.6 1.6E+02 0.0035 25.3 5.3 49 585-633 3-55 (94)
267 PLN02645 phosphoglycolate phos 24.1 1.5E+02 0.0032 32.5 6.0 39 670-708 232-271 (311)
268 COG0190 FolD 5,10-methylene-te 23.5 4.7E+02 0.01 28.0 9.1 62 666-727 135-206 (283)
269 KOG3128 Uncharacterized conser 23.2 2.8E+02 0.0062 29.0 7.0 136 593-736 139-289 (298)
270 cd05013 SIS_RpiR RpiR-like pro 23.1 2.9E+02 0.0063 25.4 7.2 108 596-711 2-112 (139)
271 PRK14168 bifunctional 5,10-met 22.8 2.1E+02 0.0046 31.0 6.6 61 666-726 140-214 (297)
272 PF11019 DUF2608: Protein of u 22.8 1.6E+02 0.0036 31.1 5.8 106 593-702 82-195 (252)
273 PRK11557 putative DNA-binding 22.7 3.7E+02 0.0081 28.7 8.7 109 595-711 116-227 (278)
274 cd00859 HisRS_anticodon HisRS 22.4 1.9E+02 0.0042 24.1 5.3 47 586-632 6-53 (91)
275 PRK05886 yajC preprotein trans 22.2 2.5E+02 0.0053 25.4 5.7 24 110-133 27-51 (109)
276 PF14336 DUF4392: Domain of un 21.7 2.1E+02 0.0047 31.0 6.5 39 594-632 62-101 (291)
277 cd05014 SIS_Kpsf KpsF-like pro 21.5 82 0.0018 29.0 2.9 31 592-622 58-88 (128)
278 TIGR03127 RuMP_HxlB 6-phospho 21.4 6.9E+02 0.015 24.5 9.8 106 595-712 18-125 (179)
279 PF06196 DUF997: Protein of un 21.4 4.2E+02 0.0091 22.4 6.7 30 937-966 39-69 (80)
280 COG0279 GmhA Phosphoheptose is 21.2 1.1E+02 0.0024 29.7 3.5 45 580-626 110-154 (176)
281 PF12791 RsgI_N: Anti-sigma fa 21.2 1.5E+02 0.0033 22.9 3.8 36 123-158 5-42 (56)
282 cd05008 SIS_GlmS_GlmD_1 SIS (S 21.1 1E+02 0.0022 28.3 3.4 30 591-620 56-85 (126)
283 PF06923 GutM: Glucitol operon 21.1 5.8E+02 0.013 23.0 8.0 55 91-154 6-60 (109)
284 TIGR00262 trpA tryptophan synt 20.5 5.6E+02 0.012 27.1 9.3 42 588-629 120-163 (256)
285 PF06941 NT5C: 5' nucleotidase 20.5 69 0.0015 32.2 2.3 29 592-620 73-101 (191)
286 PF09926 DUF2158: Uncharacteri 20.3 65 0.0014 24.8 1.5 12 143-154 2-13 (53)
287 TIGR00696 wecB_tagA_cpsF bacte 20.2 4.1E+02 0.0088 26.4 7.6 37 597-634 37-73 (177)
288 smart00306 HintN Hint (Hedgeho 20.1 1E+02 0.0022 26.8 3.0 26 126-151 74-99 (100)
289 PRK14178 bifunctional 5,10-met 20.0 7.4E+02 0.016 26.6 9.9 141 584-727 29-202 (279)
No 1
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-171 Score=1412.85 Aligned_cols=949 Identities=55% Similarity=0.853 Sum_probs=870.7
Q ss_pred CcccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcC
Q 001949 1 MEDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (992)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~ 80 (992)
|.+.|..+++|+++.|++|+.+|||++|+.+|++.||+|+++.....++|+.+++||.+++..+|++++++||++.
T Consensus 1 t~~~~~~~v~e~~~~f~t~~~~GLt~~ev~~r~~~yG~Nel~~ee~~~~wk~vLeQF~n~Li~iLL~sA~ISfvl~---- 76 (972)
T KOG0202|consen 1 TEEAHAKSVSEVLAEFGTDLEEGLTSDEVTRRRKKYGENELPAEEGESLWKLVLEQFDNPLILILLLSAAISFVLA---- 76 (972)
T ss_pred CcchhcCcHHHHHHHhCcCcccCCCHHHHHHHHHhcCCccCccccCCcHHHHHHHHHHhHHHHHHHHHHHHHHHHH----
Confidence 6788999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCce
Q 001949 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (992)
Q Consensus 81 ~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 160 (992)
.|.++++|.+++++|+.++++||+|++|++++|+++.|+.++|+|+|+.+.+++++|||||||.++.||+||||.
T Consensus 77 -----~~~e~~vI~liiv~nvtVG~~QEy~aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADl 151 (972)
T KOG0202|consen 77 -----DFDEPFVITLIIVINVTVGFVQEYNAEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADL 151 (972)
T ss_pred -----hcccceeeeeeeeeeeeeeeeeehhhHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccce
Confidence 455888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCCccccccccccc-ccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccC
Q 001949 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSII-ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (992)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~-~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (992)
|+++. -++.+|||+|||||.|+.|...... .+....+++.|++|+||.|..|+++|+|+.||.+|.+|++.+.+.+.
T Consensus 152 Rl~e~--~sl~iDeS~LTGEs~pv~K~t~~v~~~~~~~~~dk~NiaFsGT~V~~G~a~GIVi~TG~nTeiG~I~~~m~~~ 229 (972)
T KOG0202|consen 152 RLIEA--KSLRIDESSLTGESEPVSKDTDAVPKDENADVQDKKNIAFSGTLVVAGRAKGIVIGTGLNTEIGKIFKMMQAT 229 (972)
T ss_pred eEEee--eeeeeecccccCCcccccccCccccCCCCCccccceeeEeecceeecCceeEEEEeccccchHHHHHHHHhcc
Confidence 99984 4499999999999999999887776 56778899999999999999999999999999999999999999999
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc-chHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001949 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGG-FLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (992)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~ 318 (992)
+..+||||++++++...+..++.++|+.+|++.+.++.++.+.+ |++.....|..++++.+++||++||+.++++++.+
T Consensus 230 e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~~p~~~g~~fk~~~~~f~IaVsLAVAAIPEGLPaVvT~tLALG 309 (972)
T KOG0202|consen 230 ESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFLDPVHGGSWFKGALYYFKIAVSLAVAAIPEGLPAVVTTTLALG 309 (972)
T ss_pred CCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhccccccccchhchhhhhhHHHHHHHHhccCCCcchhhhhHHHh
Confidence 99999999999999999998899999999998877777666655 78888999999999999999999999999999999
Q ss_pred hhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccc
Q 001949 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (992)
Q Consensus 319 ~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (992)
.+||+|+++++|++.++|+||.+++||+|||||||+|+|++.++++.+....+. .++..+|..|++.+..........
T Consensus 310 ~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~--~~f~~tg~ty~~~g~v~~~~~~~~ 387 (972)
T KOG0202|consen 310 TRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATV--DEFNPTGTTYSPEGEVFKDGLYEK 387 (972)
T ss_pred HHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccc--cccccCCceeCCCCceEecCcccc
Confidence 999999999999999999999999999999999999999999999987655443 667778999999888776653333
Q ss_pred cCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCcccc
Q 001949 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (992)
Q Consensus 399 ~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (992)
+.....+.+.+++.+.++||++.+++++. +.+...|.|+|.||..+++++|+...... ..++++ ...+++.+.
T Consensus 388 ~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~-----~~s~~~-~~~c~~~~~ 460 (972)
T KOG0202|consen 388 DKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRST-----NLSNEE-ASACNRVYS 460 (972)
T ss_pred ccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhh-----cccccc-cccchhHHH
Confidence 33446778999999999999999887766 77888999999999999999998775411 111222 335566778
Q ss_pred ccccEEEeecCCCCCceEEEEEeeCC---eEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccc
Q 001949 479 IEFKKVSILEFSRDRKMMSVLCSHKQ---MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEA 555 (992)
Q Consensus 479 ~~~~~l~~~~F~s~~k~msviv~~~~---~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 555 (992)
..++.++++||+|+||+|||.+.+.. ++.+|+|||+|.|+++|++++.++++...|+++..|+.+.+...+++. +|
T Consensus 461 ~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il~~~~~~g~-~g 539 (972)
T KOG0202|consen 461 RLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETILANVYEMGS-EG 539 (972)
T ss_pred HhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHHHHHHHHhh-cc
Confidence 88899999999999999999998743 479999999999999999998885557799999999999999999998 99
Q ss_pred hhhhhhhcccCCc-cc------ccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH
Q 001949 556 LRCLALALKQMPI-NR------QTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (992)
Q Consensus 556 ~r~l~~a~~~l~~-~~------~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~ 627 (992)
+||+++|+++.+. .. +...+. .|.||+|+|++|+.||||++++++|+.|+++||+|.|+|||+..||.+||+
T Consensus 540 LRvLalA~~~~~~~~~~~~~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r 619 (972)
T KOG0202|consen 540 LRVLALASKDSPGQVPDDQDLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR 619 (972)
T ss_pred ceEEEEEccCCcccChhhhhhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH
Confidence 9999999997763 11 122333 799999999999999999999999999999999999999999999999999
Q ss_pred HhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee
Q 001949 628 KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (992)
Q Consensus 628 ~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (992)
++|+.....+..+.+++|++++.+++++.......+.+|+|++|.+|.+||++||++|+.|+|+|||+||+||||.||||
T Consensus 620 ~iGi~~~~ed~~~~~~TG~efD~ls~~~~~~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIG 699 (972)
T KOG0202|consen 620 EIGIFSEDEDVSSMALTGSEFDDLSDEELDDAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIG 699 (972)
T ss_pred HhCCCcCCccccccccchhhhhcCCHHHHHHHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccc
Confidence 99999988888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEec-CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Q 001949 708 IAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVN 786 (992)
Q Consensus 708 Ia~g-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~ 786 (992)
|||| +|++++|++||+|+.||||++|+.+++|||.+|.|++++++|+++.|+.++..+++.+.++.|.|++|+|+||+|
T Consensus 700 IAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l~aa~~~p~pL~pvQiLWiN 779 (972)
T KOG0202|consen 700 IAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFLTAAFGIPEPLIPVQILWIN 779 (972)
T ss_pred eeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhCCCCcccchhhheee
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHH-------HHHHHHHhcCCCCCccccccccccCCC
Q 001949 787 LVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGG-------FIWWYVYSNEGPKLPYSELMNFDSCST 859 (992)
Q Consensus 787 ~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 859 (992)
+++|++|+.+||++|+|+++|++|||++++++++.|.+++++..|+ ..+++.++......+++++.+|..|..
T Consensus 780 lvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~ 859 (972)
T KOG0202|consen 780 LVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAHYNSCCR 859 (972)
T ss_pred eeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcchhhhcc
Confidence 9999999999999999999999999999999999999999998881 222222222256677888888888887
Q ss_pred CCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccccceeccc
Q 001949 860 RETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTP 939 (992)
Q Consensus 860 ~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~ 939 (992)
.|...+|.+|......|++|+++++.-.||+++|++.+.++|.+++|+|+||.+++.++++++++++|+|+++.+|+..+
T Consensus 860 ~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~~iFq~~~ 939 (972)
T KOG0202|consen 860 DFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQRIFQTEP 939 (972)
T ss_pred cccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhhhhheecC
Confidence 78788899998888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001949 940 LSWADWTAVFYLSFPVIIIDEVLKFFSRKSS 970 (992)
Q Consensus 940 l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~~ 970 (992)
+++.+|++++.+++.+++++|++||+.|.++
T Consensus 940 l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 940 LSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred CcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 9999999999999999999999999999875
No 2
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=9.4e-140 Score=1294.01 Aligned_cols=930 Identities=27% Similarity=0.441 Sum_probs=760.3
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCC
Q 001949 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (992)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~ 81 (992)
.+||..+++++++.|+|++.+|||++||++|+++||+|+++.++++++|+.+++||++++.++++++++++++.
T Consensus 5 ~~~~~~~~~~v~~~l~t~~~~GLs~~ea~~rl~~~G~N~l~~~~~~s~~~~~l~q~~~~~~~iL~~aails~~~------ 78 (1053)
T TIGR01523 5 NAYFSDIADEAAEFIGTSIPEGLTHDEAQHRLKEVGENRLEADSGIDAKAMLLHQVCNAMCMVLIIAAAISFAM------ 78 (1053)
T ss_pred CchhhCCHHHHHHHhCcCcccCCCHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHH------
Confidence 47999999999999999988999999999999999999999998899999999999999999999999999976
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCcee
Q 001949 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMR 161 (992)
Q Consensus 82 ~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ 161 (992)
..|.++++|++++++++.++++||+|+++++++|+++.+.+++|+|||++++|+++||||||||.|++||+||||+|
T Consensus 79 ---~~~~~~~iIl~vv~in~~i~~~QE~~aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~r 155 (1053)
T TIGR01523 79 ---HDWIEGGVISAIIALNILIGFIQEYKAEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLR 155 (1053)
T ss_pred ---hhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEE
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCCccccccccccc--ccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccC
Q 001949 162 MIEMLSNQLRVDQAILTGESCSVEKELDSII--ATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (992)
Q Consensus 162 ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~--~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (992)
|++ ++++.||||+|||||.|+.|.+.... ....+..++.|++|+||.|.+|++.++|++||.+|.+|+|.+++...
T Consensus 156 Li~--~~~L~VDES~LTGES~pV~K~~~~~~~~~~~~~~~d~~n~lf~GT~V~~G~g~~vVvatG~~T~~GkIa~~~~~~ 233 (1053)
T TIGR01523 156 LIE--TKNFDTDEALLTGESLPVIKDAHATFGKEEDTPIGDRINLAFSSSAVTKGRAKGICIATALNSEIGAIAAGLQGD 233 (1053)
T ss_pred EEE--eCceEEEchhhcCCCCceeccccccccccccCCcccCCCccccCceEEeeeEEEEEEEecCccHHHHHHHHHhhh
Confidence 997 67899999999999999999875432 12234567789999999999999999999999999999999988543
Q ss_pred CC-----------------------------------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccc
Q 001949 240 ED-----------------------------------EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGF 284 (992)
Q Consensus 240 ~~-----------------------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (992)
+. .+||+++++++++.++..++++++++++++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~~--------- 304 (1053)
T TIGR01523 234 GGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKFD--------- 304 (1053)
T ss_pred hhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------
Confidence 21 2499999999999998888887777776643210
Q ss_pred hHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEE
Q 001949 285 LRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICV 364 (992)
Q Consensus 285 ~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~ 364 (992)
.....+.++++++++++|++||++++++++++++||+++++++|+++++|+||++++||+|||||||+|+|+|++++.
T Consensus 305 --~~~~~~~~av~l~Va~VPegLp~~vti~La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~ 382 (1053)
T TIGR01523 305 --VDKEVAIYAICLAISIIPESLIAVLSITMAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWI 382 (1053)
T ss_pred --hhHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEE
Confidence 112345678899999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred eccccCCCceeEEeec--CcccCCC-Cc--------------------cc-cCC--Ccc-c--cCCCCchHHHHHHHHhh
Q 001949 365 VHSVQQGPIIAEYGVT--GTTYAPE-GV--------------------VF-DSS--GIQ-L--EFPAQLPCLLHIARCSA 415 (992)
Q Consensus 365 ~~~~~~~~~~~~~~~~--~~~~~~~-~~--------------------~~-~~~--~~~-~--~~~~~~~~~~~l~~~~~ 415 (992)
.+.. .+.+. +..|.+. +. .. ... ... . +.....+.+.+++.+++
T Consensus 383 ~~~~-------~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~ 455 (1053)
T TIGR01523 383 PRFG-------TISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAA 455 (1053)
T ss_pred cCCc-------eEEecCCCCCCCCcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHH
Confidence 5310 01111 1111111 00 00 000 000 0 00001234567888899
Q ss_pred hccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCc-hhhhhhhcc-c--ccccccCccccccccEEEeecCCC
Q 001949 416 LCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSM-PSALNMLSK-H--ERASYCNHHWEIEFKKVSILEFSR 491 (992)
Q Consensus 416 lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~-~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~F~s 491 (992)
+||++.+..+..++.+...|||+|.||++++.+.|++..... ......... . ............+|++++++||+|
T Consensus 456 lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds 535 (1053)
T TIGR01523 456 LANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDS 535 (1053)
T ss_pred hccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhccccccccccccccccccccceEEEeccCC
Confidence 999876643222233445799999999999998887421000 000000000 0 000000001234688999999999
Q ss_pred CCceEEEEEeeC--CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcc
Q 001949 492 DRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPIN 569 (992)
Q Consensus 492 ~~k~msviv~~~--~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~ 569 (992)
+|||||++++++ +++++|+|||||.|+++|+.+..++++...+++++.++++.+..++|+. +|+||+++|||+++.+
T Consensus 536 ~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~~~~a~-~GlRvLa~A~r~l~~~ 614 (1053)
T TIGR01523 536 EIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANMESLAA-EGLRVLAFASKSFDKA 614 (1053)
T ss_pred CCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHHHHHHh-cCCeEEEEEEEECCch
Confidence 999999999875 3478999999999999999766542335678999999999999999998 9999999999998753
Q ss_pred ccc--------Ccc-ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc---
Q 001949 570 RQT--------LSY-DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD--- 637 (992)
Q Consensus 570 ~~~--------~~~-~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~--- 637 (992)
+.. ... ..|+||+|+|+++++||+|++++++|++||++||+++|+|||++.||.++|+++||......
T Consensus 615 ~~~~~~~~~~~~~~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~ 694 (1053)
T TIGR01523 615 DNNDDQLKNETLNRATAESDLEFLGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDR 694 (1053)
T ss_pred hccchhhhccccchhhhccCCEEEEEEeeecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccc
Confidence 211 011 26899999999999999999999999999999999999999999999999999999753211
Q ss_pred ---cccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CC
Q 001949 638 ---FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SG 713 (992)
Q Consensus 638 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~ 713 (992)
....+++|.+++.+.++++.+......||||++|+||.++|+.+|++|++|+|+|||.||+|||++|||||||| +|
T Consensus 695 ~~~~~~~vitG~~l~~l~~~~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~g 774 (1053)
T TIGR01523 695 DEIMDSMVMTGSQFDALSDEEVDDLKALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAMGING 774 (1053)
T ss_pred cccccceeeehHHhhhcCHHHHHHHhhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEecCCCc
Confidence 12468999999999999999999999999999999999999999999999999999999999999999999999 89
Q ss_pred cHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----C-CCCchHHHHHHHHHH
Q 001949 714 TAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLG----I-PDTLAPVQLLWVNLV 788 (992)
Q Consensus 714 ~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~----~-~~~l~~~~~l~~~~~ 788 (992)
++.++++||+++.++++.+++.++++||++|.|+++++.|.+++|+.++++.+++.+++ . +.|++|+|+||+|++
T Consensus 775 t~vak~aADivl~dd~f~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli 854 (1053)
T TIGR01523 775 SDVAKDASDIVLSDDNFASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMI 854 (1053)
T ss_pred cHHHHHhcCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888874 3 478999999999999
Q ss_pred HhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHH------HHHHHHhcCCCCCccccccccccCCCCCC
Q 001949 789 TDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGF------IWWYVYSNEGPKLPYSELMNFDSCSTRET 862 (992)
Q Consensus 789 ~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 862 (992)
+|.+|+++|+++++++++|++|||+++++++++.++..+++.|.+ ..|++.+.+ +....+. ..|.+++.
T Consensus 855 ~d~~palaL~~e~~~~~~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~---~~~~~~~--~~~~~~~~ 929 (1053)
T TIGR01523 855 TSCFPAMGLGLEKAAPDLMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYG---FGSGNLG--HDCDAHYH 929 (1053)
T ss_pred HHHHHHHhhccCCCChhHHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccCcccc--cccccccc
Confidence 999999999999999999999999999999998876666666622 111111110 0000000 01111110
Q ss_pred CCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccC---------------CCcchhhHHHHHHHHHHHHHHHh
Q 001949 863 THPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIP---------------PWSNLWLVASIILTMFLHILILY 927 (992)
Q Consensus 863 ~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~N~~l~~~i~~~~~l~~~~~~ 927 (992)
..|. ....++|++|.+++++|+++.|+||+.+.++|..+ .|+|++++++++++++++++++|
T Consensus 930 -~~~~--~~~~a~t~~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~ 1006 (1053)
T TIGR01523 930 -AGCN--DVFKARSAAFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIY 1006 (1053)
T ss_pred -cccc--chhhhHHHHHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHh
Confidence 0111 11345899999999999999999999888877643 67999999999999999999999
Q ss_pred cccccc-ceecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001949 928 VPPLSV-LFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSS 970 (992)
Q Consensus 928 ~p~~~~-~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~~ 970 (992)
+|+++. +|++.|+++ .|+.+++++++.++++|++|+++|++.
T Consensus 1007 ~p~~~~~~f~~~~l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~~ 1049 (1053)
T TIGR01523 1007 IPVINDDVFKHKPIGA-EWGLAAAATIAFFFGAEIWKCGKRRLF 1049 (1053)
T ss_pred hhhhhhhhhccCCcch-HHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999986 999999996 899999999999999999999987663
No 3
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-140 Score=1168.11 Aligned_cols=880 Identities=31% Similarity=0.459 Sum_probs=755.3
Q ss_pred CHHHHHHHhCCCCCCCCCH--HHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcc
Q 001949 8 SVVEVLDFFGVDPTKGLTD--SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLT 85 (992)
Q Consensus 8 ~~~~~~~~l~~~~~~GL~~--~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~ 85 (992)
.+++++++|+||+..||+. +|..+|++.||+|.+|++++++||.++++.|.+...+++.++|++|+.++++... ...
T Consensus 102 Gv~gL~~~LKt~~~~Gi~~~~~el~~Rr~~fG~N~~p~k~~K~Fl~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g-~~~ 180 (1034)
T KOG0204|consen 102 GVEGLCKKLKTDPNEGISGEDDELERRRKIFGSNTYPEKPPKGFLRFVWEALQDVTLIILMVAAVVSLGLGIYTPG-IED 180 (1034)
T ss_pred CHHHHHHHhccCcccCCCCChHHHHHHHHhcCCCCCCCCCCccHHHHHHHHhccchHHHHHHHHHHHHhhhhccCC-CCc
Confidence 5899999999999999986 8899999999999999999999999999999999999999999999999987522 345
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQ-ADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~-~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
.|++++.|++.+++..++....+++.++.++.|.+.. ..+..|+|||+.++|+..|||||||+.|+.||.+||||++++
T Consensus 181 GW~eG~aI~~sV~~VV~VtA~nDy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~ 260 (1034)
T KOG0204|consen 181 GWIEGVAILLSVILVVLVTAVNDYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQ 260 (1034)
T ss_pred ccccchhheeeEEEEEEEeecchhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEe
Confidence 7999999999888888888899999999999987543 457899999999999999999999999999999999999997
Q ss_pred ecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001949 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (992)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (992)
++++.+|||++||||++++|... .+.++++||++.+|.++++|+++|.+|..|+++..+.....+++
T Consensus 261 --gn~L~iDESSlTGESd~v~k~~~-----------~dPfLlSGTkv~eGsgkMlVTaVGmnt~wG~~m~~l~~~~~e~t 327 (1034)
T KOG0204|consen 261 --GNSLKIDESSLTGESDHVQKSLD-----------KDPFLLSGTKVMEGSGKMLVTAVGMNTQWGIIMTLLGAGGEEET 327 (1034)
T ss_pred --ccceeEecccccCCCcceeccCC-----------CCCeEeecceeecCcceEEEEEeeecchHhhHHHhhhcCCCcCC
Confidence 67999999999999999999863 36799999999999999999999999999999999999888999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-----C------CCccchHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001949 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-----P------SHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (992)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~------~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~ 313 (992)
|||-++++++..+..+.+.++.+.+++....+.. . +.....+.+..+|..++.++++++|++||+++++
T Consensus 328 pLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVPEGLPLAVTL 407 (1034)
T KOG0204|consen 328 PLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVPEGLPLAVTL 407 (1034)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECCCCccHHHHH
Confidence 9999999999999888777776666554433210 1 1112356677788888889999999999999999
Q ss_pred HHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccC
Q 001949 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (992)
Q Consensus 314 ~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (992)
++++++++|.+++.++|.++++|++|+.++||+|||||||+|+|+|.+.++.+..++.. . +..
T Consensus 408 sLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~--------~----~~~----- 470 (1034)
T KOG0204|consen 408 SLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVN--------S----PKS----- 470 (1034)
T ss_pred HHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeecccccccc--------C----ccc-----
Confidence 99999999999999999999999999999999999999999999999999876444310 0 000
Q ss_pred CCccccCCCCchHHH-HHHHHhhhccccccccCCCC-CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhccccccc
Q 001949 394 SGIQLEFPAQLPCLL-HIARCSALCNESVLQYNPDK-GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERAS 471 (992)
Q Consensus 394 ~~~~~~~~~~~~~~~-~l~~~~~lc~~~~~~~~~~~-~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 471 (992)
..-.+.+. .+....+.+.+..+...... ......|+|+|.||+.++...|.++.
T Consensus 471 -------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~----------------- 526 (1034)
T KOG0204|consen 471 -------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQ----------------- 526 (1034)
T ss_pred -------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchH-----------------
Confidence 00122333 34444455444433332222 26778899999999999999887652
Q ss_pred ccCccccccccEEEeecCCCCCceEEEEEeeCCeE-EEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHH
Q 001949 472 YCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMC-VMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSL 550 (992)
Q Consensus 472 ~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~-~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 550 (992)
..+.+.++++.+||+|.||+|+++++.+++. ++|+|||+|.++..|+.+.+. +|...+++++.+..+++.++.|
T Consensus 527 ----~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y~~~KGAsEiVL~~C~~~~~~-~g~~~~~~e~~~~~~~~~Ie~m 601 (1034)
T KOG0204|consen 527 ----DVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHYVHWKGASEIVLKSCEYYIDS-NGELVPFNEDDRKSFKDVIEPM 601 (1034)
T ss_pred ----hhcchhheeEEeccCcccceeeEEEEcCCCCeEEEEcChHHHHHHhhhheECC-CCCEeeCCHHHHHHHHHHHHHH
Confidence 2245667899999999999999999965444 499999999999999999887 8999999999999999999999
Q ss_pred hhccchhhhhhhcccCCcc----cccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHH
Q 001949 551 AGKEALRCLALALKQMPIN----RQTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESI 625 (992)
Q Consensus 551 ~~~~g~r~l~~a~~~l~~~----~~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~i 625 (992)
|+ +|+||+|+|||++... .+....+ .+.+++++|++|++||.|||++++|+.|++|||.|.|+||||..||++|
T Consensus 602 A~-~~LRti~lAy~df~~~~~~~~~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAI 680 (1034)
T KOG0204|consen 602 AS-EGLRTICLAYRDFVAGPDEEPSWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAI 680 (1034)
T ss_pred HH-hhhheeeEEeeccccCCCCCCCccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHH
Confidence 99 9999999999996543 1112222 6789999999999999999999999999999999999999999999999
Q ss_pred HHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCC
Q 001949 626 CHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (992)
Q Consensus 626 a~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (992)
|.+|||..+..+ ..++.|.++++++++++.++..+..|.||.+|.+|.-+|+.++++|++|+++|||.||+|||++||
T Consensus 681 A~eCGILt~~~d--~~~lEG~eFr~~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeAD 758 (1034)
T KOG0204|consen 681 ARECGILTPGGD--FLALEGKEFRELSQEERDKIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEAD 758 (1034)
T ss_pred HHHcccccCCCc--cceecchhhhhcCHHHHHhhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcc
Confidence 999999998754 578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEec-CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHH
Q 001949 706 IGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLW 784 (992)
Q Consensus 706 vgIa~g-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~ 784 (992)
||.||| .|+++||++||+|++||||.+|+.++.+||+.|.||+|+++|.++.|+..++..|+++.....+||++.|+||
T Consensus 759 VGlAMGIaGTeVAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLW 838 (1034)
T KOG0204|consen 759 VGLAMGIAGTEVAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLW 838 (1034)
T ss_pred cchhccccchhhhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999988889999999999
Q ss_pred HHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHH---HHHHHHhcCCCCCccccccccccCCCCC
Q 001949 785 VNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGF---IWWYVYSNEGPKLPYSELMNFDSCSTRE 861 (992)
Q Consensus 785 ~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 861 (992)
+|++||.+.+++||++||.+++|+|+|..+++++|++.||.-++..+.+ +.+.+.+.+...+..+...+
T Consensus 839 VNLIMDTLgALALATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~-------- 910 (1034)
T KOG0204|consen 839 VNLIMDTLGALALATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLH-------- 910 (1034)
T ss_pred HHHHHHHHHHHHhccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCC--------
Confidence 9999999999999999999999999999999999999875444333333 22333333322221111000
Q ss_pred CCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCC
Q 001949 862 TTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLS 941 (992)
Q Consensus 862 ~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~ 941 (992)
.......|++|++|++||+||.+|.|...+--.+.++++|+.|+..+..++++|+++ +.+.+.+|++++++
T Consensus 911 -------~~~~~~nTiIFNtFV~~qvFNEinaRki~~~NvFkgi~~N~~F~~ii~~T~v~QviI--veF~g~~~st~~L~ 981 (1034)
T KOG0204|consen 911 -------SPPSVHNTIIFNTFVFCQVFNEINARKIDERNVFKGIFRNRLFCVIITITVVSQVII--VEFGGAFFSTTPLS 981 (1034)
T ss_pred -------CchhhheeeehhHHHHHHHHHHHhhcchhHHhHHHHHhcCceEEEEeeeeeehhhhh--hhhcCcceeeeccc
Confidence 001233699999999999999999999765555578899999999999999888865 56788889999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001949 942 WADWTAVFYLSFPVIIIDEVLKFFSR 967 (992)
Q Consensus 942 ~~~w~~~~~~~~~~l~~~ei~K~~~r 967 (992)
+.+|++|++++++.+.+..+.|.+.-
T Consensus 982 ~~qWl~ci~~g~~sl~~g~~ik~iP~ 1007 (1034)
T KOG0204|consen 982 LTQWLWCIFIGVLSLPWGQLLKCIPV 1007 (1034)
T ss_pred HHHHHHHHHHHHHHHHHHHHheeccc
Confidence 99999999999999999999997643
No 4
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.3e-133 Score=1245.60 Aligned_cols=910 Identities=31% Similarity=0.449 Sum_probs=754.9
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcC--
Q 001949 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING-- 80 (992)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~-- 80 (992)
.||..|++++++.|++++.+|||++||++|+++||+|++++++++++|+.++++|++++.++++++++++++.+.+..
T Consensus 16 ~~~~~~~~~~~~~l~t~~~~GLs~~e~~~rl~~~G~N~l~~~~~~~~~~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~ 95 (997)
T TIGR01106 16 DDHKLSLDELERKYGTDLSKGLSAARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIQAST 95 (997)
T ss_pred CchhCCHHHHHHHhCcCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcc
Confidence 589999999999999999999999999999999999999998889999999999999999999999999887654421
Q ss_pred --CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCC
Q 001949 81 --ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (992)
Q Consensus 81 --~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPa 158 (992)
......|++++++++++++++++++++++|+++.+++++++.+.+++|+|||++++|+++||||||+|.|++||+|||
T Consensus 96 ~~~~~~~~~~~~~~i~~vv~i~~~i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPa 175 (997)
T TIGR01106 96 EEEPQNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPA 175 (997)
T ss_pred CCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEee
Confidence 112246889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhcc
Q 001949 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (992)
Q Consensus 159 D~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (992)
||++++ ++.+.||||+|||||.|+.|.+++. .....+.+|++|+||.+.+|++.++|++||.+|.+|++.+.+.+
T Consensus 176 D~~il~--~~~l~VdeS~LTGES~pv~K~~~~~---~~~~~~~~n~l~~Gt~v~~G~~~~~V~~tG~~T~~g~i~~~~~~ 250 (997)
T TIGR01106 176 DLRIIS--AQGCKVDNSSLTGESEPQTRSPEFT---HENPLETRNIAFFSTNCVEGTARGIVVNTGDRTVMGRIASLASG 250 (997)
T ss_pred eEEEEE--ccCcEEEccccCCCCCceeccCCCc---ccCccccCCeEEeccEeeeeeEEEEEEEccccchhhHHHhhhhh
Confidence 999997 4468999999999999999987532 12234678999999999999999999999999999999998888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001949 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (992)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~ 318 (992)
.+.+++|+++.++++...++.+++++++++++++..... .+...+.+++++++++|||+||++++++++.+
T Consensus 251 ~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~i~v~v~~iP~~L~~~v~i~l~~~ 321 (997)
T TIGR01106 251 LENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILGY---------TWLEAVIFLIGIIVANVPEGLLATVTVCLTLT 321 (997)
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CHHHHHHHHHHHHhhcCCccchHHHHHHHHHH
Confidence 778889999999999999888887777766665433221 12345667788999999999999999999999
Q ss_pred hhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccc
Q 001949 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (992)
Q Consensus 319 ~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (992)
+++|+++|+++|+++++|+||+++++|+|||||||+|+|+|.+++..+..+. ..+. ..+.+..
T Consensus 322 ~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~~-~~~~~~~-------- 384 (997)
T TIGR01106 322 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHE--------ADTT-EDQSGVS-------- 384 (997)
T ss_pred HHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEe--------cCCc-cCCCCcc--------
Confidence 9999999999999999999999999999999999999999999997543221 1110 0000000
Q ss_pred cCCCCchHHHHHHHHhhhccccccccCCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCc
Q 001949 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (992)
Q Consensus 399 ~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (992)
.+........+..++++||++.+..+... ...+..|+|+|.||++++...+... .
T Consensus 385 -~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~---------------------~ 442 (997)
T TIGR01106 385 -FDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV---------------------M 442 (997)
T ss_pred -CCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH---------------------H
Confidence 01122344567788899998765422111 1234569999999999988644211 0
Q ss_pred cccccccEEEeecCCCCCceEEEEEeeC----CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHh
Q 001949 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK----QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (992)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~----~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (992)
..+..+++++.+||+|+||||++++..+ +++++|+|||||.|+++|+++.. +|...+++++.++.+.+.+++++
T Consensus 443 ~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~--~g~~~~l~~~~~~~~~~~~~~~a 520 (997)
T TIGR01106 443 EMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILI--HGKEQPLDEELKEAFQNAYLELG 520 (997)
T ss_pred HHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhc--CCCcccCCHHHHHHHHHHHHHHH
Confidence 1234678899999999999999988642 46789999999999999998763 57788999999999999999999
Q ss_pred hccchhhhhhhcccCCcccccC----c---cc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH
Q 001949 552 GKEALRCLALALKQMPINRQTL----S---YD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (992)
Q Consensus 552 ~~~g~r~l~~a~~~l~~~~~~~----~---~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~ 623 (992)
+ +|+||+++|||.++.++... . .+ .|+|++|+|+++++||+|++++++|++|+++||+++|+|||++.+|.
T Consensus 521 ~-~GlRvla~A~k~l~~~~~~~~~~~~~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~ 599 (997)
T TIGR01106 521 G-LGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 599 (997)
T ss_pred h-cCCEEEEEEEeecCcccccccccccchhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 8 99999999999987532211 1 11 38899999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCccc--------------------cccccccchhhhcCCHHHHHHHhcce--eEEeecChhhHHHHHHHH
Q 001949 624 SICHKIGAFDHLVD--------------------FVGRSYTASEFEELPAMQQTVALQHM--ALFTRVEPSHKRMLVEAL 681 (992)
Q Consensus 624 ~ia~~~gi~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~r~~p~~K~~iv~~l 681 (992)
++|+++|+...... ....+++|.+++.+.++++.+.+.+. .||||++|+||.++|+.+
T Consensus 600 ~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l 679 (997)
T TIGR01106 600 AIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGC 679 (997)
T ss_pred HHHHHcCCCCCCccchhhhhhhccccccccccccccceEEEhHHhhhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH
Confidence 99999999754321 01258999999999999998888765 499999999999999999
Q ss_pred hhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (992)
Q Consensus 682 ~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 760 (992)
|+.|++|+|+|||.||+||||+|||||||| +|++.++++||+++.+|++.+++.++++||++|.|+++++.|.++.|+.
T Consensus 680 q~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~ 759 (997)
T TIGR01106 680 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 759 (997)
T ss_pred HHCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999999999999999999999999999 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCC-CCCccchHHHHHHH-HHH------H
Q 001949 761 EVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKV-SEAVVTGWLFFRYL-VIG------G 832 (992)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~-~~~~~~~~~~~~~~-~~~------~ 832 (992)
++++.+++.+++.|+|++++|+||+|+++|++|+++++++++++++|++||+++ .+++++++++..++ ..| .
T Consensus 760 ~~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~ 839 (997)
T TIGR01106 760 EITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGG 839 (997)
T ss_pred HHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999985 67888876654433 223 1
Q ss_pred HHHHHHHhc--CCCCCcccccc-ccccC--CCCCCCCCCCcc-C-----CccchhHHHHHHHHHHHHHHHhhccCCCccc
Q 001949 833 FIWWYVYSN--EGPKLPYSELM-NFDSC--STRETTHPCSIF-E-----DRHPSTVSMTVLVVVEMFNALNNLSENQSLL 901 (992)
Q Consensus 833 ~~~~~~~~~--~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~-~-----~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~ 901 (992)
++.+++.+. +........+. .|..+ .+......+.++ . ...++|+.|.+++++|++|.++||+.+.++|
T Consensus 840 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f 919 (997)
T TIGR01106 840 FFTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVF 919 (997)
T ss_pred HHHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCccccc
Confidence 222222111 10000000000 00000 000000000000 0 0135899999999999999999999888888
Q ss_pred ccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001949 902 VIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKS 969 (992)
Q Consensus 902 ~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~ 969 (992)
..+ ++|++++++++++++++++++|+|+++.+|++.++++.+|+++++++++.++++|++|+++|++
T Consensus 920 ~~~-~~n~~l~~~~~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 920 QQG-MKNKILIFGLFEETALAAFLSYCPGMGVALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred ccC-CcCHHHHHHHHHHHHHHHHHHHhhhhHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 766 7999999999999999999999999999999999999999999999999999999999998865
No 5
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.3e-133 Score=1233.85 Aligned_cols=876 Identities=36% Similarity=0.558 Sum_probs=754.0
Q ss_pred cccccCCHHHHHHHhCCCCCCCCC-HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHh-hhhHHHHHHHHHHHHHHHHHhc
Q 001949 2 EDAYARSVVEVLDFFGVDPTKGLT-DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQF-DDLLVKILIAAAVISFFLALIN 79 (992)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~-~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f-~~~~~~~l~~~~iis~~~~~~~ 79 (992)
++||.+|++++++.|++|+.+||| ++||++|+++||+|+++.++++++|+.++++| ++|+.+++++++++++++
T Consensus 2 ~~~~~~~~~~v~~~l~t~~~~GLs~~~ev~~r~~~~G~N~i~~~~~~s~~~~~l~~~~~~~~~~~L~~aa~ls~~~---- 77 (884)
T TIGR01522 2 KQYCELSVEETCSKLQTDLQNGLNSSQEASHRRAFHGWNEFDVEEDESLWKKFLSQFVKNPLILLLIASAVISVFM---- 77 (884)
T ss_pred cchhhCCHHHHHHHhCcCcccCCCcHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhChHHHHHHHHHHHHHHH----
Confidence 579999999999999999999999 99999999999999999988889999999999 999999999999999876
Q ss_pred CCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCc
Q 001949 80 GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPAD 159 (992)
Q Consensus 80 ~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD 159 (992)
..|.++++++++++++..+++++|+|+++.+++|+++.+.+++|+|||++++|+++||||||+|.+++||+||||
T Consensus 78 -----g~~~~~~~i~~~i~~~~~i~~~qe~~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaD 152 (884)
T TIGR01522 78 -----GNIDDAVSITLAILIVVTVGFVQEYRSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPAD 152 (884)
T ss_pred -----cchhhHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeee
Confidence 357788888888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeeecCCceEEecccccCCCccccccccccccc-ccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhcc
Q 001949 160 MRMIEMLSNQLRVDQAILTGESCSVEKELDSIIAT-NAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (992)
Q Consensus 160 ~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~-~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (992)
|++++ +.++.||||+|||||.|+.|.+++.... .....+++|++|+||.+.+|++.++|++||.+|.+|++.+.+.+
T Consensus 153 g~ii~--g~~l~VDES~LTGES~pv~K~~~~~~~~~~~~~~~~~n~v~~GT~v~~G~~~~~V~~tG~~T~~gki~~~v~~ 230 (884)
T TIGR01522 153 LRIVE--AVDLSIDESNLTGETTPVSKVTAPIPAATNGDLAERSNIAFMGTLVRCGHGKGIVVGTGSNTEFGAVFKMMQA 230 (884)
T ss_pred EEEEE--cCceEEEcccccCCCcceecccccccccccccccccCceEEeCCEEEeeeEEEEEEEecCccHHHHHHHHhcc
Confidence 99996 3469999999999999999988643221 23345678999999999999999999999999999999999998
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001949 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (992)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~ 318 (992)
.+.+++|+++.+++++.++.+++++++++++++.+... ..+...+..++++++++|||+||++++++++.+
T Consensus 231 ~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~v~llv~aiP~~Lp~~vt~~l~~~ 301 (884)
T TIGR01522 231 IEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQG---------KDWLEMFTISVSLAVAAIPEGLPIIVTVTLALG 301 (884)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCHHHHHHHHHHHHHHHccchHHHHHHHHHHHH
Confidence 88889999999999999888766555554444432211 113456677889999999999999999999999
Q ss_pred hhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccc
Q 001949 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (992)
Q Consensus 319 ~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (992)
.+||+++|+++|+.+++|+||++|+||||||||||+|+|+|.+++..+..+.. .++..+.+.+....+.....
T Consensus 302 ~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 374 (884)
T TIGR01522 302 VLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTM-------LNAVSLNQFGEVIVDGDVLH 374 (884)
T ss_pred HHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEee-------ccCCccCCCCcccccccccc
Confidence 99999999999999999999999999999999999999999999875432110 11111111111100000000
Q ss_pred cCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCcccc
Q 001949 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (992)
Q Consensus 399 ~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (992)
...++.+.+++.++++||++..... + ....|||+|.|+++++++.|++. .+
T Consensus 375 --~~~~~~~~~~l~~~~l~~~~~~~~~--~--~~~~g~p~e~All~~~~~~~~~~-----------------------~~ 425 (884)
T TIGR01522 375 --GFYTVAVSRILEAGNLCNNAKFRNE--A--DTLLGNPTDVALIELLMKFGLDD-----------------------LR 425 (884)
T ss_pred --cccCHHHHHHHHHHhhhCCCeecCC--C--CCcCCChHHHHHHHHHHHcCcHh-----------------------HH
Confidence 0123445677788889998754321 1 12348999999999998876421 12
Q ss_pred ccccEEEeecCCCCCceEEEEEee--CCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccch
Q 001949 479 IEFKKVSILEFSRDRKMMSVLCSH--KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEAL 556 (992)
Q Consensus 479 ~~~~~l~~~~F~s~~k~msviv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 556 (992)
..++.++.+||+|+||||+++++. ++++++++||+||.|+..|+++... +|...+++++.++++.+..++++. +|+
T Consensus 426 ~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~-~g~~~~l~~~~~~~i~~~~~~~a~-~G~ 503 (884)
T TIGR01522 426 ETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKK-DGKTLTLTQQQRDVIQEEAAEMAS-AGL 503 (884)
T ss_pred hhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhc-CCCeeeCCHHHHHHHHHHHHHHHh-cCC
Confidence 356788999999999999999887 5678999999999999999987654 566778888889999999999998 999
Q ss_pred hhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcc
Q 001949 557 RCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV 636 (992)
Q Consensus 557 r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~ 636 (992)
|++++||+.+ +.+++|+|+++++||+||+++++|++|+++|++++|+|||++.+|.++|+++|+....
T Consensus 504 rvl~~A~~~~-----------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~- 571 (884)
T TIGR01522 504 RVIAFASGPE-----------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKT- 571 (884)
T ss_pred EEEEEEEEcC-----------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC-
Confidence 9999999876 3589999999999999999999999999999999999999999999999999998654
Q ss_pred ccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CCcH
Q 001949 637 DFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTA 715 (992)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~ 715 (992)
..+++|++++++.++++.+.+.+..||||++|+||.++|+.+|++|+.|+|+|||.||+||+++|||||||| ++++
T Consensus 572 ---~~~v~g~~l~~~~~~~l~~~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~g~~g~~ 648 (884)
T TIGR01522 572 ---SQSVSGEKLDAMDDQQLSQIVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAMGQTGTD 648 (884)
T ss_pred ---CceeEhHHhHhCCHHHHHHHhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEecCCCcCH
Confidence 457899999999999999999999999999999999999999999999999999999999999999999999 7999
Q ss_pred HHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhh
Q 001949 716 VAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPAT 795 (992)
Q Consensus 716 ~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~ 795 (992)
.++++||+++.++++.+++.++++||+++.|+++++.|.++.|+..+++.+++.+++.+.|++++|+||+|+++|++|++
T Consensus 649 va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~qiL~inl~~d~~~a~ 728 (884)
T TIGR01522 649 VAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAMQILWINILMDGPPAQ 728 (884)
T ss_pred HHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999988888999999999999999999999999999
Q ss_pred hhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccch
Q 001949 796 AIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPS 875 (992)
Q Consensus 796 ~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 875 (992)
+|++++|++++|++||++++++++++.++..+++.|.++....+.. +.+ .+.. +. ....++
T Consensus 729 ~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~-~~~~-~~-------------~~~~~~ 789 (884)
T TIGR01522 729 SLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFV----FVR-EMQD-GV-------------ITARDT 789 (884)
T ss_pred HhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHH----HHH-HHcC-Cc-------------chhhHH
Confidence 9999999999999999999999999988877776663322111100 000 0000 00 012347
Q ss_pred hHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCChhhHHHHHHHHHHH
Q 001949 876 TVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPV 955 (992)
Q Consensus 876 t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~ 955 (992)
|++|.+++++|+||.|+||+++.+.|..++++|++++++++++++++++++|+|+++.+|++.|+++.+|+.+++++++.
T Consensus 790 t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~ 869 (884)
T TIGR01522 790 TMTFTCFVFFDMFNALACRSQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQSVFQTEALSIKDLLFLLLITSSV 869 (884)
T ss_pred HHHHHHHHHHHHHHHHHHccCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999999888888878899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 001949 956 IIIDEVLKFFSRKS 969 (992)
Q Consensus 956 l~~~ei~K~~~r~~ 969 (992)
++++|++|+++|++
T Consensus 870 ~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 870 CIVDEIRKKVERSR 883 (884)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999999998865
No 6
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-134 Score=1232.55 Aligned_cols=873 Identities=41% Similarity=0.634 Sum_probs=757.9
Q ss_pred ccccCCHH--HHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcC
Q 001949 3 DAYARSVV--EVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING 80 (992)
Q Consensus 3 ~~~~~~~~--~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~ 80 (992)
+||..+.+ ++...+.++...||+++|+.+|++.||+|+++..+..++|..++.||++++..+++.+++++++.+.+.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~GLs~~e~~~r~~~~G~N~~~~~~~~~~~~~fl~~f~~~~~~iL~~~a~~s~~~~~~~~ 101 (917)
T COG0474 22 TWHPLSVERNELLLELFTSPTTGLSEEEVKRRLKKYGPNELPEEKKRSLLKKFLRQFKDPFIILLLVAALLSAFVGDWVD 101 (917)
T ss_pred cccccccchhhHHHhhcCCcccCCCHHHHHHHHhhcCCccccccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 67889999 9999999999999999999999999999999999989999999999999999999999999998754321
Q ss_pred CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCce
Q 001949 81 ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (992)
Q Consensus 81 ~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 160 (992)
.. ....+++.++++|..++++||+|++++++++++..+.+++|+|||++++|+++||||||||+|++||+||||+
T Consensus 102 ~~-----~~~~~I~~~i~~n~~~g~~qe~~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~ 176 (917)
T COG0474 102 AG-----VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADL 176 (917)
T ss_pred cC-----cceeeehHHHHHHHHHHHHHHHHHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccce
Confidence 10 4556778888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCCcccccccccccccccccC-CCCceeeecceEeeceEEEEEEEecccccchhHHHHhccC
Q 001949 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQ-DKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQT 239 (992)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~-~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~ 239 (992)
+|+++ .+++||||+|||||.|+.|.+......+.+.. ++.|++|+||.+.+|++.|+|++||.+|+.|++.+.+...
T Consensus 177 rLl~~--~~l~VdEs~LTGES~pv~K~~~~~~~~~~~~~~d~~n~l~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~~~~ 254 (917)
T COG0474 177 RLLES--SDLEVDESALTGESLPVEKQALPLTKSDAPLGLDRDNMLFSGTTVVSGRAKGIVVATGFETEFGKIARLLPTK 254 (917)
T ss_pred EEEEe--cCceEEcccccCCCcchhccccccccccccccCCccceEEeCCEEEcceEEEEEEEEcCccHHHHHHHhhccc
Confidence 99984 33799999999999999999876665555565 8899999999999999999999999999999999999887
Q ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhh
Q 001949 240 EDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (992)
Q Consensus 240 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~ 319 (992)
....+|+++.++++...+..++++++++++++....... .+...+..+++++++++|++||+.++++++.++
T Consensus 255 ~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~~~~~--------~~~~~~~~~v~l~va~IPegLp~~vti~la~g~ 326 (917)
T COG0474 255 KEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLFRGGN--------GLLESFLTALALAVAAVPEGLPAVVTIALALGA 326 (917)
T ss_pred cccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc--------cHHHHHHHHHHHHHhccccchHHHHHHHHHHHH
Confidence 778899999999999999999999888888877443221 135678889999999999999999999999999
Q ss_pred hhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCcccc
Q 001949 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (992)
Q Consensus 320 ~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (992)
++|+++++++|+++++|+||++++||+|||||||+|+|+|++++..+... ..++ .
T Consensus 327 ~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~-------------~~~~-----~------- 381 (917)
T COG0474 327 QRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGK-------------DIDD-----K------- 381 (917)
T ss_pred HHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCcc-------------cccc-----c-------
Confidence 99999999999999999999999999999999999999999999874100 0000 0
Q ss_pred CCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccc
Q 001949 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (992)
Q Consensus 400 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (992)
.....+.+.+++..+++||+.....+ + ++..|||+|.||++++++.|... + ...++.
T Consensus 382 ~~~~~~~~~~~l~~~~lc~~~~~~~~---~-~~~~gdptE~Al~~~a~~~~~~~-~------------------~~~~~~ 438 (917)
T COG0474 382 DLKDSPALLRFLLAAALCNSVTPEKN---G-WYQAGDPTEGALVEFAEKLGFSL-D------------------LSGLEV 438 (917)
T ss_pred ccccchHHHHHHHHHHhcCccccccc---C-ceecCCccHHHHHHHHHhcCCcC-C------------------HHHHhh
Confidence 00123445578888899998876543 2 77889999999999999988632 0 012345
Q ss_pred cccEEEeecCCCCCceEEEEEee-CCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhh
Q 001949 480 EFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRC 558 (992)
Q Consensus 480 ~~~~l~~~~F~s~~k~msviv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~ 558 (992)
.+++++.+||+|+|||||++++. ++++.+++|||||.|+++|+.. +...+++++.++.+.+..++++. +|+|+
T Consensus 439 ~~~~~~~~PFdS~rKrMsviv~~~~~~~~~~~KGApe~il~~~~~~-----~~~~~~~~~~~~~~~~~~~~la~-~glRv 512 (917)
T COG0474 439 EYPILAEIPFDSERKRMSVIVKTDEGKYILFVKGAPEVILERCKSI-----GELEPLTEEGLRTLEEAVKELAS-EGLRV 512 (917)
T ss_pred hcceeEEecCCCCceEEEEEEEcCCCcEEEEEcCChHHHHHHhccc-----CcccccCHHHHHHHHHHHHHHHH-HHHHH
Confidence 67899999999999999999984 5668999999999999999875 45678899999999999999998 99999
Q ss_pred hhhhcccCCcccccCc-cccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc
Q 001949 559 LALALKQMPINRQTLS-YDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD 637 (992)
Q Consensus 559 l~~a~~~l~~~~~~~~-~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~ 637 (992)
+++|||..+..+.... .+.|+|++|+|+++|+||||++++++|+.|++|||++||+|||+..||.+||++||+......
T Consensus 513 la~A~k~~~~~~~~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~ 592 (917)
T COG0474 513 LAVAYKKLDRAEKDDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAES 592 (917)
T ss_pred HHHHhccCCcccccchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCc
Confidence 9999998876554333 338999999999999999999999999999999999999999999999999999998775422
Q ss_pred cccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CCcHH
Q 001949 638 FVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAV 716 (992)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~~ 716 (992)
+.+++|++++.+.++++.+.+.+..||||++|+||.++|+.+|++|+.|+|+|||+||+||||+|||||||| +|++.
T Consensus 593 --~~vi~G~el~~l~~~el~~~~~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIamg~~Gtda 670 (917)
T COG0474 593 --ALVIDGAELDALSDEELAELVEELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAMGGEGTDA 670 (917)
T ss_pred --eeEeehHHhhhcCHHHHHHHhhhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEecccHHHH
Confidence 458999999999999999999999999999999999999999999999999999999999999999999999 89999
Q ss_pred HHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHHHHHHHHHHHhhhhhh
Q 001949 717 AKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIP-DTLAPVQLLWVNLVTDGLPAT 795 (992)
Q Consensus 717 ~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~-~~l~~~~~l~~~~~~~~~p~~ 795 (992)
+|++||+++.++++..+..+++|||++|.|+++++.|.+++|+.++++++++.+++.+ .|++++|++|+|+++|++|++
T Consensus 671 ak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~pa~ 750 (917)
T COG0474 671 AKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSLPAL 750 (917)
T ss_pred HHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhhhhh
Confidence 9999999999999999999999999999999999999999999999999999998888 899999999999999999999
Q ss_pred hhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHHH-------HHHHHhcCCCCCccccccccccCCCCCCCCCCCc
Q 001949 796 AIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGFI-------WWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSI 868 (992)
Q Consensus 796 ~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (992)
+++.++++++.|++|||+++++++++..++++++..++. .|++.+.. + . ..+ .. .
T Consensus 751 ~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~-----~--~------~~~----~~-~ 812 (917)
T COG0474 751 ALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLG-----F--I------ANT----LG-L 812 (917)
T ss_pred eeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----c--c------ccc----cc-h
Confidence 999999999999999999999999999888855544211 11111110 0 0 000 00 0
Q ss_pred c-CCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccc-cceecccCChhhHH
Q 001949 869 F-EDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLS-VLFSVTPLSWADWT 946 (992)
Q Consensus 869 ~-~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~-~~f~~~~l~~~~w~ 946 (992)
. .....+|+.|..++++|.++.+.+|+.+.+++...++.|+.+++++++.++++++..|.|+.. ..|+..++++..|+
T Consensus 813 ~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~~~f~~~~~~~~~~~ 892 (917)
T COG0474 813 DLFQALLQTTAFTVLVLIQLLLTLAVRSRGRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQPTPLSLFEWL 892 (917)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHhhhccCCCCcHHHHH
Confidence 0 012348999999999999999999999888888888899999999999999999999999988 78999999988898
Q ss_pred HHHHHH--HHHHHHHHHHHH
Q 001949 947 AVFYLS--FPVIIIDEVLKF 964 (992)
Q Consensus 947 ~~~~~~--~~~l~~~ei~K~ 964 (992)
.++++. ...+...+.+|+
T Consensus 893 ~~~~~~~~~~~~~~~~~~~~ 912 (917)
T COG0474 893 IAIAVALLLLYIVVSELYKL 912 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 887777 333444444444
No 7
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=5.9e-131 Score=1219.75 Aligned_cols=877 Identities=31% Similarity=0.448 Sum_probs=732.1
Q ss_pred CHHHHHHHhCCCCCCCCC--HHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcC----C
Q 001949 8 SVVEVLDFFGVDPTKGLT--DSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING----E 81 (992)
Q Consensus 8 ~~~~~~~~l~~~~~~GL~--~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~----~ 81 (992)
+++++++.|++|..+||| ++||++|+++||+|+++.++++++|+.++++|+++++++++++++++++++...+ .
T Consensus 43 ~~~~~~~~l~t~~~~GLs~~~~ev~~r~~~yG~N~l~~~~~~s~~~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~ 122 (941)
T TIGR01517 43 GAEGIATKLKTDLNEGVRLSSSTLERREKVYGKNELPEKPPKSFLQIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKA 122 (941)
T ss_pred CHHHHHHHhCcCcccCCCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccC
Confidence 788999999999999999 9999999999999999999999999999999999999999999999998875421 2
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCce
Q 001949 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAY-QADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADM 160 (992)
Q Consensus 82 ~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~-~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~ 160 (992)
.+...|+++++++++++++..++.++++++++.++++++. .+.+++|+|||++++|+++||||||+|.|++||+|||||
T Consensus 123 ~~~~~~~~~~~il~~v~~~~~i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~ 202 (941)
T TIGR01517 123 DTETGWIEGVAILVSVILVVLVTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADG 202 (941)
T ss_pred ccccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccE
Confidence 2334789999999999999999999999999999999864 467899999999999999999999999999999999999
Q ss_pred eeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCC
Q 001949 161 RMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTE 240 (992)
Q Consensus 161 ~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~ 240 (992)
+|++ +.++.||||+|||||.|+.|.++ ..|++|+||.+.+|++.++|++||.+|.+||+.+++.+.+
T Consensus 203 ~li~--g~~l~VdES~LTGES~pv~K~~~-----------~~n~v~~GT~v~~G~~~~iV~~tG~~T~~gki~~~~~~~~ 269 (941)
T TIGR01517 203 VFIS--GLSLEIDESSITGESDPIKKGAP-----------KDSFLLSGTVVNEGSGRMLVTAVGVNSFGGKLMMELRAEG 269 (941)
T ss_pred EEEE--cCcEEEEecccCCCCCcccccCC-----------CCceEEeCCeEEeeEEEEEEEEeCCCcHHHHHHHhhccCC
Confidence 9996 34899999999999999999863 2579999999999999999999999999999999887755
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc--cCCCCc-----cchHHHHHHHHHHHHHHHHhcCCchHHHHHH
Q 001949 241 DEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHF--RDPSHG-----GFLRGAIHYFKIAVALAVAAIPEGLPAVVTT 313 (992)
Q Consensus 241 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~ 313 (992)
+++|++++++++..++..++++++++.++++...+ ...... .....+...+..++++++++|||+||+++++
T Consensus 270 -~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~llv~~iP~~Lp~~vti 348 (941)
T TIGR01517 270 -EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDGRDTEEDAQTFLDHFIIAVTIVVVAVPEGLPLAVTI 348 (941)
T ss_pred -CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccchhhHHHHHHHHHHHHHHHhhCCCchHHHHHH
Confidence 56799999999999988877766666555442211 000000 0012345667888999999999999999999
Q ss_pred HHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccC
Q 001949 314 CLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDS 393 (992)
Q Consensus 314 ~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (992)
+++.++++|+++|+++|+++++|+||++++||||||||||+|+|++++++..+..+. ..+ ...
T Consensus 349 ~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~--------~~~--------~~~- 411 (941)
T TIGR01517 349 ALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFN--------VRD--------VLR- 411 (941)
T ss_pred HHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEe--------cCc--------ccc-
Confidence 999999999999999999999999999999999999999999999999986532111 000 000
Q ss_pred CCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhccccccccc
Q 001949 394 SGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYC 473 (992)
Q Consensus 394 ~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 473 (992)
...+...+++.....||+.........+..+..|||+|.|++++++..|.+..
T Consensus 412 --------~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~~------------------- 464 (941)
T TIGR01517 412 --------NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDYQ------------------- 464 (941)
T ss_pred --------cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCHH-------------------
Confidence 00122344444445555443221111233456799999999999987764321
Q ss_pred CccccccccEEEeecCCCCCceEEEEEeeC-CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhh
Q 001949 474 NHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAG 552 (992)
Q Consensus 474 ~~~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 552 (992)
..+..+++++.+||+|+||+|+++++.+ +++++++|||||.++++|+.+... +|...++++ .++++.+.+++++.
T Consensus 465 --~~~~~~~~~~~~pF~s~~k~msvv~~~~~~~~~~~~KGA~e~il~~c~~~~~~-~g~~~~~~~-~~~~i~~~~~~~a~ 540 (941)
T TIGR01517 465 --EVRAEEKVVKIYPFNSERKFMSVVVKHSGGKVREFRKGASEIVLKPCRKRLDS-NGEATPISD-DKDRCADVIEPLAS 540 (941)
T ss_pred --HHHhhchhccccccCCCCCeEEEEEEeCCCcEEEEEECChHHHHHhhhHHhhc-CCCcccCcH-HHHHHHHHHHHHHh
Confidence 0123467788999999999999999875 458899999999999999876543 566667776 77889999999998
Q ss_pred ccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC
Q 001949 553 KEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (992)
Q Consensus 553 ~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 632 (992)
+|+|++++|||.++.++.......|+|++|+|+++++||+|++++++|++||++||+++|+|||++.||.++|+++||.
T Consensus 541 -~G~Rvl~~A~~~~~~~~~~~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 541 -DALRTICLAYRDFAPEEFPRKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred -cCCEEEEEEEEecCccccccccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCC
Confidence 9999999999998754322111247899999999999999999999999999999999999999999999999999998
Q ss_pred CCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-
Q 001949 633 DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG- 711 (992)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g- 711 (992)
+.. ..+++|++++.+.++++.+.+.+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||
T Consensus 620 ~~~----~~vi~G~~~~~l~~~el~~~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAmg~ 695 (941)
T TIGR01517 620 TFG----GLAMEGKEFRRLVYEEMDPILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGI 695 (941)
T ss_pred CCC----ceEeeHHHhhhCCHHHHHHHhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceecCC
Confidence 654 468999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhh
Q 001949 712 SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDG 791 (992)
Q Consensus 712 ~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~ 791 (992)
+|++.++++||++++++++.+++.++++||+++.|+++++.|.+++|+..+++.+++.+++.++|++++|++|+|+++|+
T Consensus 696 ~gtdvAk~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~ 775 (941)
T TIGR01517 696 SGTEVAKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDT 775 (941)
T ss_pred CccHHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999888988999999999999999999
Q ss_pred hhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHHHH---HHHHhcCCCCCccccccccccCCCCCCCCCCCc
Q 001949 792 LPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGFIW---WYVYSNEGPKLPYSELMNFDSCSTRETTHPCSI 868 (992)
Q Consensus 792 ~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 868 (992)
+|++++++++|++++|++||++++++++++.++..++..|.+.. ++.++.. ..+....... .|..
T Consensus 776 ~~al~l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~---------~~~~ 843 (941)
T TIGR01517 776 LAALALATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAG---GSIFDVSGPD---------EITS 843 (941)
T ss_pred hhHHHHccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HhhhcccCcc---------cccc
Confidence 99999999999999999999999999999988777776663211 1111110 0011100000 0000
Q ss_pred cCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCChhhHHHH
Q 001949 869 FEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAV 948 (992)
Q Consensus 869 ~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~ 948 (992)
......+|++|.+++++|++|.+++|+.+...+..++|+|++++.+++++++++++ ++|+++.+|++.++++.+|+++
T Consensus 844 ~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~--~~~~~~~~f~~~~l~~~~w~~~ 921 (941)
T TIGR01517 844 HQQGELNTIVFNTFVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVI--IVEFGGSFFSTVSLSIEQWIGC 921 (941)
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHH--HHHHHHHHhcccCCCHHHHHHH
Confidence 01134589999999999999999999976533334888999999999888888854 5678899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q 001949 949 FYLSFPVIIIDEVLKFF 965 (992)
Q Consensus 949 ~~~~~~~l~~~ei~K~~ 965 (992)
++++++.+++.|++|++
T Consensus 922 ~~~~~~~~~~~~~~~~~ 938 (941)
T TIGR01517 922 VLLGMLSLIFGVLLRLI 938 (941)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999986
No 8
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=6.7e-130 Score=1205.20 Aligned_cols=900 Identities=60% Similarity=0.941 Sum_probs=743.7
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhc-CCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEC
Q 001949 53 VLKQFDDLLVKILIAAAVISFFLALIN-GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN 131 (992)
Q Consensus 53 l~~~f~~~~~~~l~~~~iis~~~~~~~-~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~ 131 (992)
+++||++|+.++|++++++++++++.. +......|+++++|+++++++..++++||+|+++.+++|+++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 368999999999999999999987653 1222357999999999999999999999999999999999999999999999
Q ss_pred CEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceE
Q 001949 132 GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVV 211 (992)
Q Consensus 132 g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v 211 (992)
|++++|+++||||||+|.|++||+|||||++++ ++++.||||+|||||.|+.|.++..........+++|++|+||.+
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~--~~~l~VdeS~LTGES~pv~K~~~~~~~~~~~~~~~~n~l~~GT~v 158 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLS--LKTLRVDQSILTGESVSVNKHTESVPDERAVNQDKKNMLFSGTLV 158 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEE--ecceEEEcccccCCCCcccccccccCccccCcccccceeeeCCEE
Confidence 999999999999999999999999999999997 457999999999999999998764433334456778999999999
Q ss_pred eeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC-CccchHHHHH
Q 001949 212 VAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPS-HGGFLRGAIH 290 (992)
Q Consensus 212 ~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 290 (992)
.+|++.++|++||.+|.+|++.+++...+.+++|+++++++++..+..++++++++++++....+.... ..+|+..+..
T Consensus 159 ~~G~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 238 (917)
T TIGR01116 159 VAGKARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFNDPALGGGWIQGAIY 238 (917)
T ss_pred ecceEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhHHHHHH
Confidence 999999999999999999999999998888899999999999999988877777777765543322211 1234455556
Q ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccC
Q 001949 291 YFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (992)
Q Consensus 291 ~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (992)
.+..+++++++++|++||++++++++.++++|+++++++|+++++|+||++++||||||||||+|+|++.+++..+..+.
T Consensus 239 ~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~ 318 (917)
T TIGR01116 239 YFKIAVALAVAAIPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSS 318 (917)
T ss_pred HHHHHHhhhhhccccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCccc
Confidence 66778899999999999999999999999999999999999999999999999999999999999999999987654321
Q ss_pred CCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcC
Q 001949 371 GPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVG 450 (992)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g 450 (992)
. ...+...+..+++.+......... .....+....+..++++||++.+..+..++.+...|+|+|.||++++++.|
T Consensus 319 ~--~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g 394 (917)
T TIGR01116 319 S--LNEFCVTGTTYAPEGGVIKDDGPV--AGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMG 394 (917)
T ss_pred c--cceEEecCCccCCCccccccCCcc--cccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcC
Confidence 1 123334444454433221111000 001234466788889999987664332233334469999999999999988
Q ss_pred CCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCC
Q 001949 451 LPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNG 530 (992)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~ 530 (992)
++..............+ .....+.+|++++.+||+|+|||||+++++++++.+|+|||||.|+++|+++..+ +|
T Consensus 395 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~-~g 468 (917)
T TIGR01116 395 LPATKNGVSSKRRPALG-----CNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNG-DG 468 (917)
T ss_pred CCchhcccccccccccc-----hhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecC-CC
Confidence 76543221111110000 0012345788999999999999999999988889999999999999999987655 57
Q ss_pred ccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccc------cCccc-cCCCcEEEEEecccCCCcHHHHHHHHH
Q 001949 531 FIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ------TLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLS 603 (992)
Q Consensus 531 ~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~------~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~ 603 (992)
...|++++.++++.+.+++|+.++|+||+++|||.++.+.. ...++ +|+|++|+|+++++||+|++++++|++
T Consensus 469 ~~~~l~~~~~~~i~~~~~~~a~~~GlRvl~~A~k~~~~~~~~~~~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~ 548 (917)
T TIGR01116 469 RAVPLTDKMKNTILSVIKEMGTTKALRCLALAFKDIPDPREEDLLSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEK 548 (917)
T ss_pred CeeeCCHHHHHHHHHHHHHHHhhcCCeEEEEEEEECCccccccccccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHH
Confidence 77899999999999999999944899999999999865321 11122 689999999999999999999999999
Q ss_pred HHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhh
Q 001949 604 CMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN 683 (992)
Q Consensus 604 l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~ 683 (992)
||++||+++|+|||+..+|.++|+++|+..+..+.....++|.+++.+.+++......+..||||++|+||.++|+.+|+
T Consensus 549 l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~~~~~~v~ar~~P~~K~~iV~~lq~ 628 (917)
T TIGR01116 549 CRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAACRSAVLFSRVEPSHKSELVELLQE 628 (917)
T ss_pred HHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHhhhcCeEEEecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999998755443445788999999999988888889999999999999999999999
Q ss_pred cCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 684 QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (992)
Q Consensus 684 ~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 763 (992)
.|++|+|+|||.||+|||++||||||||+|++.+|++||+++.++++.+++.+++|||++|.|+++++.|.+++|+..++
T Consensus 629 ~g~~va~iGDG~ND~~alk~AdVGia~g~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~~~ 708 (917)
T TIGR01116 629 QGEIVAMTGDGVNDAPALKKADIGIAMGSGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGEVV 708 (917)
T ss_pred cCCeEEEecCCcchHHHHHhCCeeEECCCCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHHHH------HH
Q 001949 764 CIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGFIW------WY 837 (992)
Q Consensus 764 ~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~------~~ 837 (992)
+.+++.+++.|.|++++|++|+|+++|.+|++++++++|++++|++||++++++++++++++.+++.|++.. |+
T Consensus 709 ~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ 788 (917)
T TIGR01116 709 CIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGGFV 788 (917)
T ss_pred HHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999888887773211 11
Q ss_pred HHhcCCCCCccccccccccCCCCCCCCCCC-cc-CCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHH
Q 001949 838 VYSNEGPKLPYSELMNFDSCSTRETTHPCS-IF-EDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASI 915 (992)
Q Consensus 838 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i 915 (992)
..+... .+....+.....+... . ..+. .+ ....++|++|.+++++|++|.|+||+.+.++|..++|+|+++++++
T Consensus 789 ~~~~~~-~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~ 865 (917)
T TIGR01116 789 WWYLLT-HFTGCDEDSFTTCPDF-E-DPDCYVFEGKQPARTISLSVLVVIEMFNALNALSEDQSLLRMPPWVNKWLIGAI 865 (917)
T ss_pred HHHhhc-Cccccccccccccccc-c-cccccccccccchHHHHHHHHHHHHHHHHHHHcCCcccccccCCccCHHHHHHH
Confidence 111100 0000000000000000 0 0000 01 1234589999999999999999999988888887888999999999
Q ss_pred HHHHHHHHHHHhccccccceecccCChhhHHHHHHHHHHHHHHHHHHHHHHh
Q 001949 916 ILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSR 967 (992)
Q Consensus 916 ~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r 967 (992)
+++++++++++|+|+++.+|++.|+++.+|+++++++++.++++|++|+++|
T Consensus 866 ~~~~~l~~~~~~v~~~~~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~~ 917 (917)
T TIGR01116 866 CLSMALHFLILYVPFLSRIFGVTPLSLTDWLMVLKLSLPVILVDEVLKFFSR 917 (917)
T ss_pred HHHHHHHHHHHHhHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999998864
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=1.4e-129 Score=1191.63 Aligned_cols=848 Identities=27% Similarity=0.390 Sum_probs=716.0
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcC-
Q 001949 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALING- 80 (992)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~- 80 (992)
...|+.+++++++.|+++. +|||++||++|+++||+|+++.++++++|+.+++||++|+.++++++++++++.+.+..
T Consensus 25 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~rl~~~G~N~l~~~~~~~~~~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~ 103 (903)
T PRK15122 25 AREAANSLEETLANLNTHR-QGLTEEDAAERLQRYGPNEVAHEKPPHALVQLLQAFNNPFIYVLMVLAAISFFTDYWLPL 103 (903)
T ss_pred HHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhc
Confidence 4568999999999999994 79999999999999999999998888999999999999999999999999998865421
Q ss_pred -CCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEC------CEEEEeeCCCCCCCcEEEecCC
Q 001949 81 -ETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVG 153 (992)
Q Consensus 81 -~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDII~l~~G 153 (992)
......|.++++|+++++++.+++++||+|+++++++|+++.+.+++|+|| |++++|+++||||||+|.|++|
T Consensus 104 ~~~~~~~~~~~~iI~~~v~l~~~i~~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~G 183 (903)
T PRK15122 104 RRGEETDLTGVIIILTMVLLSGLLRFWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAG 183 (903)
T ss_pred cCCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCC
Confidence 111246889999999999999999999999999999999999999999999 4899999999999999999999
Q ss_pred CccCCceeeeeecCCceEEecccccCCCccccccccc----------ccccccccCCCCceeeecceEeeceEEEEEEEe
Q 001949 154 CKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDS----------IIATNAVYQDKTNILFSGTVVVAGRARAVVVGV 223 (992)
Q Consensus 154 ~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~----------~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~t 223 (992)
|+|||||++++ ++.+.||||+|||||.|+.|.+.. ......+..+++|++|+||.+.+|+++++|++|
T Consensus 184 d~IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~~V~at 261 (903)
T PRK15122 184 DMIPADVRLIE--SRDLFISQAVLTGEALPVEKYDTLGAVAGKSADALADDEGSLLDLPNICFMGTNVVSGTATAVVVAT 261 (903)
T ss_pred CEEeeeEEEEE--cCceEEEccccCCCCcceeeeccccccccccccccccccCCcccccceEEeCCEEEeeeEEEEEEEe
Confidence 99999999996 456899999999999999998521 111233445678999999999999999999999
Q ss_pred cccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhc
Q 001949 224 GANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAI 303 (992)
Q Consensus 224 G~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~i 303 (992)
|.+|++|+|.+.+.+ +..++|+++.++++.+.+..+.+.++.+++++..... ..+...+.+++++++++|
T Consensus 262 G~~T~~gkI~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~~---------~~~~~~l~~aisl~V~~~ 331 (903)
T PRK15122 262 GSRTYFGSLAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFTK---------GDWLEALLFALAVAVGLT 331 (903)
T ss_pred ccccHhhHHHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc---------CCHHHHHHHHHHHHHHHc
Confidence 999999999999877 5667899999999998887776666655554433221 123445677899999999
Q ss_pred CCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcc
Q 001949 304 PEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTT 383 (992)
Q Consensus 304 P~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 383 (992)
||+||++++++++.++++|+|+|+++|+.+++|+||++|+||||||||||+|+|+|.+++..++.
T Consensus 332 Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~~--------------- 396 (903)
T PRK15122 332 PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSGR--------------- 396 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999987632100
Q ss_pred cCCCCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhh
Q 001949 384 YAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNM 463 (992)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~ 463 (992)
..+.+. ....+|+.. + ...+||+|.|+++++.+.+...
T Consensus 397 -------------------~~~~~l---~~a~l~s~~--~--------~~~~~p~e~All~~a~~~~~~~---------- 434 (903)
T PRK15122 397 -------------------KDERVL---QLAWLNSFH--Q--------SGMKNLMDQAVVAFAEGNPEIV---------- 434 (903)
T ss_pred -------------------ChHHHH---HHHHHhCCC--C--------CCCCChHHHHHHHHHHHcCchh----------
Confidence 011122 222233210 0 1247999999999998765321
Q ss_pred hcccccccccCccccccccEEEeecCCCCCceEEEEEee-CCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHH
Q 001949 464 LSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAE 542 (992)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~ 542 (992)
....|+.+..+||++.+|+|++++++ ++++++++||+||.++++|+++.. +|...+++++.+++
T Consensus 435 -------------~~~~~~~~~~~pF~s~~k~ms~v~~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 -------------KPAGYRKVDELPFDFVRRRLSVVVEDAQGQHLLICKGAVEEMLAVATHVRD--GDTVRPLDEARRER 499 (903)
T ss_pred -------------hhhcCceEEEeeeCCCcCEEEEEEEcCCCcEEEEECCcHHHHHHhchhhhc--CCCeecCCHHHHHH
Confidence 12346788899999999999999987 567889999999999999997653 46667889999999
Q ss_pred HHHHHHHHhhccchhhhhhhcccCCcccccCcc--ccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHH
Q 001949 543 LESRLNSLAGKEALRCLALALKQMPINRQTLSY--DDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (992)
Q Consensus 543 ~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~--~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~ 620 (992)
+.+..++++. +|+|++++|||+++.++..... ..|.|++|+|+++++||+||+++++|++||++||+++|+|||++.
T Consensus 500 i~~~~~~~a~-~G~rvlavA~k~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~ 578 (903)
T PRK15122 500 LLALAEAYNA-DGFRVLLVATREIPGGESRAQYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPI 578 (903)
T ss_pred HHHHHHHHHh-CCCEEEEEEEeccCccccccccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHH
Confidence 9999999998 9999999999988654321111 257899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHH
Q 001949 621 TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPA 700 (992)
Q Consensus 621 ~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~ 700 (992)
||.++|+++||.. +.+++|.+++.++++++.+.+.+..||||++|+||.++|+.+|++|++|+|+|||.||+||
T Consensus 579 tA~aIA~~lGI~~------~~vi~G~el~~~~~~el~~~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPA 652 (903)
T PRK15122 579 VTAKICREVGLEP------GEPLLGTEIEAMDDAALAREVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPA 652 (903)
T ss_pred HHHHHHHHcCCCC------CCccchHhhhhCCHHHHHHHhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHH
Confidence 9999999999963 4689999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH
Q 001949 701 LKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPV 780 (992)
Q Consensus 701 l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~ 780 (992)
|++||||||||+|++.+|++||+|++++++.+++.++++||++|.|++|++.|.++.|+..++..+++.++..+.|++|.
T Consensus 653 Lk~ADVGIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~ 732 (903)
T PRK15122 653 LRDADVGISVDSGADIAKESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAI 732 (903)
T ss_pred HHhCCEEEEeCcccHHHHHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998888877777666899999
Q ss_pred HHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHHH---HHHHHHhcCCCCCccccccccccC
Q 001949 781 QLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGGF---IWWYVYSNEGPKLPYSELMNFDSC 857 (992)
Q Consensus 781 ~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 857 (992)
|+||+|+++|+ |+++++++++++++| +|||+++++++++.+++ +...+.+ ..+++++. .+ ..+..
T Consensus 733 qil~~nli~D~-~~lal~~d~~~~~~m-~~P~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~--------~~-~~~~~ 800 (903)
T PRK15122 733 HLLLQNLMYDI-SQLSLPWDKMDKEFL-RKPRKWDAKNIGRFMLW-IGPTSSIFDITTFALMWF--------VF-AANSV 800 (903)
T ss_pred HHHHHHHHHHH-HHHhhcCCCCCHhhc-CCCCCCChhhhHHHHHH-HHHHHHHHHHHHHHHHHH--------Hh-ccCcH
Confidence 99999999995 999999999999999 99999999999986543 3333211 11111110 00 00000
Q ss_pred CCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccc--cccce
Q 001949 858 STRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPP--LSVLF 935 (992)
Q Consensus 858 ~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~--~~~~f 935 (992)
.+ ....+|..|.+++++|+++.|++|+++. ++|+|++.+..++++++++++++|+|+ ++.+|
T Consensus 801 -------~~----~~~~~t~~f~~l~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~f 864 (903)
T PRK15122 801 -------EM----QALFQSGWFIEGLLSQTLVVHMLRTQKI-----PFIQSTAALPVLLTTGLIMAIGIYIPFSPLGAMV 864 (903)
T ss_pred -------hh----hhhhHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 00 0012577899999999999999998654 345677788888889999999999997 89999
Q ss_pred ecccCChhhHHHHHHHHHHHHHHHHHHHHH-Hhhc
Q 001949 936 SVTPLSWADWTAVFYLSFPVIIIDEVLKFF-SRKS 969 (992)
Q Consensus 936 ~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~-~r~~ 969 (992)
++.++++.+|+++++++++.+++.|++|.+ .|++
T Consensus 865 ~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~~~r~~ 899 (903)
T PRK15122 865 GLEPLPWSYFPWLAATLLGYCLVAQGMKRFYIRRF 899 (903)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999988844 4443
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=1.6e-128 Score=1179.86 Aligned_cols=839 Identities=26% Similarity=0.418 Sum_probs=703.2
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCC
Q 001949 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (992)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~ 81 (992)
...+..+++++++.|+++. +|||++||++|+++||+|+++.++++++|+.++++|++|++++++++++++++.
T Consensus 47 ~~~~~~~~~~v~~~l~~~~-~GLs~~ea~~r~~~~G~N~l~~~~~~s~~~~~~~~~~~p~~~lL~~aa~ls~~~------ 119 (902)
T PRK10517 47 LKAAVMPEEELWKTFDTHP-EGLNEAEVESAREQHGENELPAQKPLPWWVHLWVCYRNPFNILLTILGAISYAT------ 119 (902)
T ss_pred HHHHcCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH------
Confidence 3467889999999999996 699999999999999999999999999999999999999999999999998865
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEC------CEEEEeeCCCCCCCcEEEecCCCc
Q 001949 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN------GCFSILPAAELVPGDIVEVNVGCK 155 (992)
Q Consensus 82 ~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~------g~~~~i~~~~Lv~GDII~l~~G~~ 155 (992)
..|.++++++++++++.+++++||+|+++++++|+++.+.+++|+|| |++++|+++||||||+|.|++||+
T Consensus 120 ---~~~~~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~ 196 (902)
T PRK10517 120 ---EDLFAAGVIALMVAISTLLNFIQEARSTKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDM 196 (902)
T ss_pred ---ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCE
Confidence 36788999999999999999999999999999999999999999999 789999999999999999999999
Q ss_pred cCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHH
Q 001949 156 IPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS 235 (992)
Q Consensus 156 iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 235 (992)
|||||+|++ +..+.||||+|||||.|+.|.+++.........+++|++|+||.+.+|+++++|++||.+|.+|+|.+.
T Consensus 197 IPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~V~~G~~~~vV~atG~~T~~GkI~~~ 274 (902)
T PRK10517 197 IPADLRILQ--ARDLFVAQASLTGESLPVEKFATTRQPEHSNPLECDTLCFMGTNVVSGTAQAVVIATGANTWFGQLAGR 274 (902)
T ss_pred EeeeEEEEE--cCceEEEecCcCCCCCceecccccccccccCccccccceeeCceEeeeeEEEEEEEeccccHHHHHHHH
Confidence 999999996 456899999999999999999876443344556788999999999999999999999999999999999
Q ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 001949 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCL 315 (992)
Q Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~ 315 (992)
+.+.+.+++|+++.++++++++..++++++.++++++..... .+...+.+++++++++|||+||+++++++
T Consensus 275 v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~~~---------~~~~~l~~alsv~V~~~Pe~LP~~vt~~l 345 (902)
T PRK10517 275 VSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYTKG---------DWWEAALFALSVAVGLTPEMLPMIVTSTL 345 (902)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcC---------CHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 998888899999999999999888877777766665432211 12345678899999999999999999999
Q ss_pred HHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCC
Q 001949 316 ALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSG 395 (992)
Q Consensus 316 ~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (992)
+.++++|+|+|+++|+++++|+||++|++|||||||||+|+|+|.++.... +.
T Consensus 346 a~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~--------------~~------------- 398 (902)
T PRK10517 346 ARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS--------------GK------------- 398 (902)
T ss_pred HHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC--------------CC-------------
Confidence 999999999999999999999999999999999999999999998763210 00
Q ss_pred ccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCc
Q 001949 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (992)
Q Consensus 396 ~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (992)
..+ +++..+.+|... . ...+||+|.|++++++..+. +
T Consensus 399 -------~~~---~ll~~a~l~~~~--~--------~~~~~p~d~All~~a~~~~~-----------------------~ 435 (902)
T PRK10517 399 -------TSE---RVLHSAWLNSHY--Q--------TGLKNLLDTAVLEGVDEESA-----------------------R 435 (902)
T ss_pred -------CHH---HHHHHHHhcCCc--C--------CCCCCHHHHHHHHHHHhcch-----------------------h
Confidence 111 222333333321 1 11479999999998764320 0
Q ss_pred cccccccEEEeecCCCCCceEEEEEeeC-CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhcc
Q 001949 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKE 554 (992)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (992)
.....|+.+..+||+|++|+|+++++++ ++..+++||+||.++++|+++..+ |...+++++.++++.+..++++. +
T Consensus 436 ~~~~~~~~~~~~pFds~~k~msvvv~~~~~~~~~~~KGa~e~il~~c~~~~~~--~~~~~l~~~~~~~i~~~~~~~a~-~ 512 (902)
T PRK10517 436 SLASRWQKIDEIPFDFERRRMSVVVAENTEHHQLICKGALEEILNVCSQVRHN--GEIVPLDDIMLRRIKRVTDTLNR-Q 512 (902)
T ss_pred hhhhcCceEEEeeeCCCcceEEEEEEECCCeEEEEEeCchHHHHHhchhhhcC--CCeecCCHHHHHHHHHHHHHHHh-c
Confidence 1133577888999999999999999764 567899999999999999987543 56678899889999999999998 9
Q ss_pred chhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC
Q 001949 555 ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (992)
Q Consensus 555 g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (992)
|+|++++|||+++.++.......|.|++|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||..
T Consensus 513 G~rvlavA~k~~~~~~~~~~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~- 591 (902)
T PRK10517 513 GLRVVAVATKYLPAREGDYQRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA- 591 (902)
T ss_pred CCEEEEEEEecCCccccccccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc-
Confidence 9999999999886543322222478999999999999999999999999999999999999999999999999999953
Q ss_pred ccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCc
Q 001949 635 LVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (992)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~ 714 (992)
+.+++|.+++.++++++.+.+.+..||||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+
T Consensus 592 -----~~v~~G~el~~l~~~el~~~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAmg~gt 666 (902)
T PRK10517 592 -----GEVLIGSDIETLSDDELANLAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISVDGAV 666 (902)
T ss_pred -----cCceeHHHHHhCCHHHHHHHHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEeCCcC
Confidence 468899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhh
Q 001949 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPA 794 (992)
Q Consensus 715 ~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~ 794 (992)
|.||++||+|++++++.+++.++++||++|.|++|++.|.++.|+.+++..+++.++..+.|++|.|+||+|+++| +|+
T Consensus 667 dvAkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~ 745 (902)
T PRK10517 667 DIAREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQ 745 (902)
T ss_pred HHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhH
Confidence 9999999999999999999999999999999999999999999999999888877775557999999999999999 789
Q ss_pred hhhccCCCCccccccCCCCCCCCccchHHHHHHHHHH--HHHHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCc
Q 001949 795 TAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIG--GFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDR 872 (992)
Q Consensus 795 ~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 872 (992)
++++++++++++|++|||. +...+.+.+++.-.+.+ .+..++.+... +.+.. .. . ..
T Consensus 746 ~al~~d~~~~~~m~~p~r~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---~~~~~--------------~~-~--~~ 804 (902)
T PRK10517 746 VAIPFDNVDDEQIQKPQRW-NPADLGRFMVFFGPISSIFDILTFCLMWWV---FHANT--------------PE-T--QT 804 (902)
T ss_pred HhhcCCCCChhhhcCCCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---ccccc--------------hh-h--Hh
Confidence 9999999999999998873 22223333322111111 11111111100 00000 00 0 00
Q ss_pred cchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhcc--ccccceecccCC--hhhHHHH
Q 001949 873 HPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVP--PLSVLFSVTPLS--WADWTAV 948 (992)
Q Consensus 873 ~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p--~~~~~f~~~~l~--~~~w~~~ 948 (992)
..++..|.+++++|+++.+++|+.+. ++|+|++.+..++.+++++++.+|+| +++.+|++.+++ +..|+++
T Consensus 805 ~~~~~~F~~~~~~q~~~~~~~R~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~~~~~~~~~ 879 (902)
T PRK10517 805 LFQSGWFVVGLLSQTLIVHMIRTRRI-----PFIQSRAAWPLMIMTLIVMAVGIALPFSPLASYLQLQALPLSYFPWLVA 879 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCC-----CcccchHHHHHHHHHHHHHHHHHHhhHHHHHHhhCCcCCChhHHHHHHH
Confidence 12344599999999999999998644 45688999999999999999999999 889999999999 5677777
Q ss_pred HHHHHHHHHHHHHHHHH-Hhhc
Q 001949 949 FYLSFPVIIIDEVLKFF-SRKS 969 (992)
Q Consensus 949 ~~~~~~~l~~~ei~K~~-~r~~ 969 (992)
++++++ ++.|++|.+ .|+|
T Consensus 880 ~~~~~~--~~~e~~K~~~~~~~ 899 (902)
T PRK10517 880 ILAGYM--TLTQLVKGFYSRRY 899 (902)
T ss_pred HHHHHH--HHHHHHHHHHHHhh
Confidence 666655 556776654 4443
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=1.6e-127 Score=1173.38 Aligned_cols=835 Identities=26% Similarity=0.415 Sum_probs=701.6
Q ss_pred cccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCC
Q 001949 2 EDAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGE 81 (992)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~ 81 (992)
.+.|..+.+++++.|+++. +|||++||++|+++||+|+++.++++++|+.++++|++|++++++++++++++.
T Consensus 13 ~~~~~~~~~~~~~~l~~~~-~GLs~~ev~~r~~~~G~N~l~~~~~~~~~~~~~~~~~~p~~~iL~~~a~ls~~~------ 85 (867)
T TIGR01524 13 LKESQMGKETLLRKLGVHE-TGLTNVEVTERLAEFGPNQTVEEKKVPNLRLLIRAFNNPFIYILAMLMGVSYLT------ 85 (867)
T ss_pred HHHHhCCHHHHHHHhCCCC-CCCCHHHHHHHHHhcCCCcCCCCCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHH------
Confidence 4568999999999999985 799999999999999999999988888999999999999999999999999865
Q ss_pred CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEE------CCEEEEeeCCCCCCCcEEEecCCCc
Q 001949 82 TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR------NGCFSILPAAELVPGDIVEVNVGCK 155 (992)
Q Consensus 82 ~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R------~g~~~~i~~~~Lv~GDII~l~~G~~ 155 (992)
..|.++++++++++++.++++++|+|+++++++|+++.+.+++|+| ||++++|+++||||||+|.+++||+
T Consensus 86 ---~~~~~~~iI~~iv~~~~~i~~~~e~~a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~ 162 (867)
T TIGR01524 86 ---DDLEATVIIALMVLASGLLGFIQESRAERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDI 162 (867)
T ss_pred ---hhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCE
Confidence 3678899999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred cCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHH
Q 001949 156 IPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDS 235 (992)
Q Consensus 156 iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~ 235 (992)
|||||++++ +..+.||||+|||||.|+.|.+++....+.+..+++|++|+||.+.+|+++++|++||.+|.+|++.+.
T Consensus 163 VPaDg~li~--g~~l~VDES~LTGES~PV~K~~~~~~~~~~~~~~~~n~vfaGT~v~~G~~~~~V~~tG~~T~~gki~~~ 240 (867)
T TIGR01524 163 IPADARVIS--ARDLFINQSALTGESLPVEKFVEDKRARDPEILERENLCFMGTNVLSGHAQAVVLATGSSTWFGSLAIA 240 (867)
T ss_pred EcccEEEEe--cCceEEEcccccCCCCcccccCCccccccccccccccceecCCeEEEeEEEEEEEEEcCccHHHHHHHH
Confidence 999999996 446899999999999999999865433345566788999999999999999999999999999999999
Q ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHH
Q 001949 236 MLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCL 315 (992)
Q Consensus 236 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~ 315 (992)
+.+ +.+++|+++.++++++++..+++++++++++++..... ++...+..++++++++|||+||+++++++
T Consensus 241 v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~~---------~~~~~~~~al~l~v~~iP~~Lp~~vt~~l 310 (867)
T TIGR01524 241 ATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLMKG---------DWLEAFLFALAVAVGLTPEMLPMIVSSNL 310 (867)
T ss_pred hhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHhcC---------CHHHHHHHHHHHHHHhCcchHHHHHHHHH
Confidence 988 66789999999999999988887777766655432211 12346777899999999999999999999
Q ss_pred HHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCC
Q 001949 316 ALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSG 395 (992)
Q Consensus 316 ~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (992)
+.++++|+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+ +.
T Consensus 311 a~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~--------------~~------------- 363 (867)
T TIGR01524 311 AKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSS--------------GE------------- 363 (867)
T ss_pred HHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCC--------------CC-------------
Confidence 999999999999999999999999999999999999999999998864211 00
Q ss_pred ccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCc
Q 001949 396 IQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (992)
Q Consensus 396 ~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (992)
..+ +++.++.+|+.. + ...+||+|.|+++++......
T Consensus 364 -------~~~---~~l~~a~l~~~~--~--------~~~~~p~~~Al~~~~~~~~~~----------------------- 400 (867)
T TIGR01524 364 -------TSE---RVLKMAWLNSYF--Q--------TGWKNVLDHAVLAKLDESAAR----------------------- 400 (867)
T ss_pred -------CHH---HHHHHHHHhCCC--C--------CCCCChHHHHHHHHHHhhchh-----------------------
Confidence 111 222333333221 1 113699999999988643210
Q ss_pred cccccccEEEeecCCCCCceEEEEEeeCC-eEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhcc
Q 001949 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ-MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKE 554 (992)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~~-~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 554 (992)
..+..++.+..+||+|+||+|++++++++ ...+++||+||.++++|+++.. +|...+++++.++++.+..++++. +
T Consensus 401 ~~~~~~~~~~~~pF~s~~k~ms~~v~~~~~~~~~~~KGa~e~il~~c~~~~~--~~~~~~l~~~~~~~i~~~~~~~a~-~ 477 (867)
T TIGR01524 401 QTASRWKKVDEIPFDFDRRRLSVVVENRAEVTRLICKGAVEEMLTVCTHKRF--GGAVVTLSESEKSELQDMTAEMNR-Q 477 (867)
T ss_pred hHhhcCceEEEeccCCCcCEEEEEEEcCCceEEEEEeCcHHHHHHhchhhhc--CCceecCCHHHHHHHHHHHHHHHh-c
Confidence 01235678889999999999999998654 4789999999999999998754 366678888888899999999998 9
Q ss_pred chhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC
Q 001949 555 ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (992)
Q Consensus 555 g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (992)
|+|++++|||+++.++.....+.|.|++|+|+++++||+|++++++|++||++||+++|+|||++.+|.++|+++||..
T Consensus 478 G~rvlavA~~~~~~~~~~~~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~- 556 (867)
T TIGR01524 478 GIRVIAVATKTLKVGEADFTKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDA- 556 (867)
T ss_pred CCEEEEEEEeccCcccccccccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCC-
Confidence 9999999999987643322112478999999999999999999999999999999999999999999999999999964
Q ss_pred ccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCc
Q 001949 635 LVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGT 714 (992)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~ 714 (992)
+.+++|.+++.++++++.+.+.+..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|+
T Consensus 557 -----~~v~~g~~l~~~~~~el~~~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAmg~gt 631 (867)
T TIGR01524 557 -----NDFLLGADIEELSDEELARELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAA 631 (867)
T ss_pred -----CCeeecHhhhhCCHHHHHHHhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEeCCcc
Confidence 357899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhh
Q 001949 715 AVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPA 794 (992)
Q Consensus 715 ~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~ 794 (992)
+.+|++||+|++++++.+++.++++||+++.|+++++.|.++.|+..++..+++.++..+.|++|.|++|+|+++| +|+
T Consensus 632 dvAk~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~ 710 (867)
T TIGR01524 632 DIAKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQ 710 (867)
T ss_pred HHHHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999999999999999999999999999999999888877776668999999999999999 799
Q ss_pred hhhccCCCCccccccCCCCCCCCccchHHHHHHHHHH---HHHHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCC
Q 001949 795 TAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIG---GFIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFED 871 (992)
Q Consensus 795 ~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 871 (992)
++++++++++++|++||+ ++++.+.+..++ ....+ .+..+++.+.. .. . .++ . ..
T Consensus 711 ~al~~~~~~~~~m~~p~~-~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~-----~~-~------~~~----~----~~ 768 (867)
T TIGR01524 711 LTLPWDKMDREFLKKPHQ-WEQKGMGRFMLC-IGPVSSIFDIATFLLMWFV-----FS-A------NTV----E----EQ 768 (867)
T ss_pred HhhcCCCCChHhhCCCCC-CChhhHHHHHHH-HHHHHHHHHHHHHHHHHHH-----hc-c------cch----h----hh
Confidence 999999999999986665 666554433222 11111 11111111100 00 0 000 0 01
Q ss_pred ccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccc--cccceecccCCh--hhHHH
Q 001949 872 RHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPP--LSVLFSVTPLSW--ADWTA 947 (992)
Q Consensus 872 ~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~--~~~~f~~~~l~~--~~w~~ 947 (992)
...+|..|.+++++|+++.|++|+++. ++|+|++++.+++++++++++++|+|+ ++.+|++.++|+ ..|++
T Consensus 769 ~~~~t~~f~~~~~~~~~~~~~~R~~~~-----~~~~n~~~~~~~~~~~~~~~~~~~~p~~~~~~~f~~~~l~~~~~~~~~ 843 (867)
T TIGR01524 769 ALFQSGWFVVGLLSQTLVVHMIRTEKI-----PFIQSRAAAPVMIATLLVMALGIIIPFSPLGHSIGLVSLPLSYFPWLI 843 (867)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcCCC-----CcCcchHHHHHHHHHHHHHHHHHHhchhhhhhhhccccCCccHHHHHH
Confidence 123677899999999999999998644 456799999999999999999999998 488999998854 45666
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 001949 948 VFYLSFPVIIIDEVLKFFSR 967 (992)
Q Consensus 948 ~~~~~~~~l~~~ei~K~~~r 967 (992)
+++++++ ++.|++|.+..
T Consensus 844 ~~~~~~~--~~~e~~k~~~~ 861 (867)
T TIGR01524 844 AILVGYM--ATMQLVKTFYI 861 (867)
T ss_pred HHHHHHH--HHHHHHHHHHH
Confidence 6655554 66778775533
No 12
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-130 Score=1085.72 Aligned_cols=908 Identities=31% Similarity=0.481 Sum_probs=779.4
Q ss_pred ccccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhc---
Q 001949 3 DAYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALIN--- 79 (992)
Q Consensus 3 ~~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~--- 79 (992)
+.|.+|++|++++|++|..+|||.++|.+++++.|+|.+++|+.++-|..+.+|+++.+.++++++++++++.+.+.
T Consensus 38 ~~H~~~~~eL~~r~~t~~~~Glt~~~A~~~L~rdG~NaL~Ppk~t~~wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~ 117 (1019)
T KOG0203|consen 38 DDHKLSVDELCERYGTSVSQGLTSQEAAEKLARDGPNALTPPKTTPEWIKFLRQLFGGFSILLWIGAILCFVAYGIQAST 117 (1019)
T ss_pred ccccCCHHHHHHHhcCChhhcccHHHHHhhhccCCCCCCCCCCCChHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhccc
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999887765
Q ss_pred -CCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCC
Q 001949 80 -GETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPA 158 (992)
Q Consensus 80 -~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPa 158 (992)
++.+....+.++++..++++.....++|+.|..+.++.++++.|..++|+|||+...+.++|||+||+|.++-||+|||
T Consensus 118 ~~~~~~~nly~giiL~~vv~vtg~~~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPA 197 (1019)
T KOG0203|consen 118 EDDPSDDNLYLGIVLAAVVIVTGLFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPA 197 (1019)
T ss_pred CCCCCCcceEEEEEEEEEEEEEecCCCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccc
Confidence 1223445667778888888889999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhcc
Q 001949 159 DMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQ 238 (992)
Q Consensus 159 D~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (992)
|.|+++ +..++||+|+|||||+|..+.+.... ....+..|+.|.+|.+++|.+.|+|++||.+|.+|+|+.+...
T Consensus 198 DiRiis--~~g~~vdnsslTGesEP~~~~~~~t~---~~~~Et~Ni~f~st~~veG~~~givi~tGd~Tv~G~ia~l~~~ 272 (1019)
T KOG0203|consen 198 DIRIIS--ATGCKVDNSSLTGESEPQTRSPEFTH---ENPLETRNIAFFSTNCVEGTGRGIVIATGDRTVMGRIASLASG 272 (1019)
T ss_pred eeEEEE--ecceeEeccccccccCCccCCccccc---cCchhheeeeeeeeEEecceEEEEEEecCCceEEeehhhhhcc
Confidence 999997 67899999999999999999875433 2337889999999999999999999999999999999999888
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001949 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (992)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~ 318 (992)
.+..++|.++.++++..++..+++.+.+..|.+..... ..+...+.+.++++++.+|++|+.+++.++...
T Consensus 273 ~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------y~~l~avv~~i~iivAnvPeGL~~tvTv~Ltlt 343 (1019)
T KOG0203|consen 273 LEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------YEWLRAVVFLIGIIVANVPEGLLATVTVCLTLT 343 (1019)
T ss_pred CCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------chhHHHhhhhheeEEecCcCCccceehhhHHHH
Confidence 88999999999999999998888877777776655432 123445556788999999999999999999999
Q ss_pred hhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccc
Q 001949 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (992)
Q Consensus 319 ~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (992)
.+||+++++++|++.++|+||+.++||+|||||||+|.|+|.++|..+........ .+..+ +
T Consensus 344 akrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~--~~~~~-------~--------- 405 (1019)
T KOG0203|consen 344 AKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTT--EDQSG-------Q--------- 405 (1019)
T ss_pred HHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeech--hhhhc-------c---------
Confidence 99999999999999999999999999999999999999999999987543221000 00001 0
Q ss_pred cCCCCchHHHHHHHHhhhccccccccCCCC---CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCc
Q 001949 399 EFPAQLPCLLHIARCSALCNESVLQYNPDK---GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNH 475 (992)
Q Consensus 399 ~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~---~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (992)
.....++....+..|+.+||.+.....+.+ -.....|++.|.||+++++..-.+. .
T Consensus 406 ~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~---------------------~ 464 (1019)
T KOG0203|consen 406 SFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGSV---------------------M 464 (1019)
T ss_pred cccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcchH---------------------H
Confidence 111245677889999999999876532221 1234569999999999987542110 1
Q ss_pred cccccccEEEeecCCCCCceEEEEEeeCC----eEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHh
Q 001949 476 HWEIEFKKVSILEFSRDRKMMSVLCSHKQ----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLA 551 (992)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~~----~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (992)
..++.++.+.++||+|.+|+.-.+...++ +..+.+|||||.++++|+.+..+ |...|++++.++.+.+...++.
T Consensus 465 ~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~--g~e~pld~~~~~~f~~ay~~lg 542 (1019)
T KOG0203|consen 465 ELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILIN--GEEKPLDEKLKEAFQEAYLELG 542 (1019)
T ss_pred HHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeec--CCCCCcCHHHHHHHHHHHHHhh
Confidence 23567788999999999999877776543 67899999999999999998876 8889999999999999999999
Q ss_pred hccchhhhhhhcccCCcccccCccc--------cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH
Q 001949 552 GKEALRCLALALKQMPINRQTLSYD--------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE 623 (992)
Q Consensus 552 ~~~g~r~l~~a~~~l~~~~~~~~~~--------~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~ 623 (992)
+ .|.||++|+++.++.++....+. --.++.|+|++++-||+|..+++++..||+||||++|+|||++.||+
T Consensus 543 ~-~GerVlgF~~~~l~~~~~p~~~~f~~d~~n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAk 621 (1019)
T KOG0203|consen 543 G-LGERVLGFCDLELPDEKFPRGFQFDTDDVNFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAK 621 (1019)
T ss_pred h-cchHHHHHHHHhcchhcCCCceEeecCCCCCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhh
Confidence 8 99999999999998764332211 23689999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCcccc--------------------ccccccchhhhcCCHHHHHHHhcc--eeEEeecChhhHHHHHHHH
Q 001949 624 SICHKIGAFDHLVDF--------------------VGRSYTASEFEELPAMQQTVALQH--MALFTRVEPSHKRMLVEAL 681 (992)
Q Consensus 624 ~ia~~~gi~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~r~~p~~K~~iv~~l 681 (992)
++|++.||....... ...+++|.++..+..+++++++.. -.||||.||+||..||+.+
T Consensus 622 AiA~~vgIi~~~~et~e~~a~r~~~~v~~vn~~~a~a~VihG~eL~~~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c 701 (1019)
T KOG0203|consen 622 AIAKSVGIISEGSETVEDIAKRLNIPVEQVNSRDAKAAVIHGSELPDMSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC 701 (1019)
T ss_pred hhhhheeeecCCchhhhhhHHhcCCcccccCccccceEEEecccccccCHHHHHHHHHhCCceEEEecCccceEEeEhhh
Confidence 999999977643321 235789999999999999998873 4799999999999999999
Q ss_pred hhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 682 QNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIG 760 (992)
Q Consensus 682 ~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~ 760 (992)
|+.|.+|+++|||+||+||||.|||||||| .|+|.+|++||+|++||||.+++..+++||.+|+|+||.|.|.+++|+.
T Consensus 702 Qr~GaiVaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNip 781 (1019)
T KOG0203|consen 702 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIP 781 (1019)
T ss_pred hhcCcEEEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcch
Confidence 999999999999999999999999999999 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCC-CCCCccchHH-HHHHHHHH------H
Q 001949 761 EVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRK-VSEAVVTGWL-FFRYLVIG------G 832 (992)
Q Consensus 761 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~-~~~~~~~~~~-~~~~~~~~------~ 832 (992)
++.+.+++.++|+|.|+.++++|.+++.+|++|+++|+||+|+.++|+|+||+ +.+.+++.+. .+.|+.+| +
T Consensus 782 EI~PfL~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~ag 861 (1019)
T KOG0203|consen 782 EITPFLLFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAG 861 (1019)
T ss_pred hHhHHHHHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998 6788888764 47777777 5
Q ss_pred HHHHHHHhcCCCCCcccccc---ccc----------cCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCc
Q 001949 833 FIWWYVYSNEGPKLPYSELM---NFD----------SCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQS 899 (992)
Q Consensus 833 ~~~~~~~~~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~ 899 (992)
|+.||+.+..+....+..+. .|+ +.+.|...+.. +-....+|.+|.+++++|+++++.|++++-|
T Consensus 862 F~tYFvima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk--~le~tc~taFfvsIvV~Q~adLii~KTRRnS 939 (1019)
T KOG0203|consen 862 FFTYFVIMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRK--YLEYTCYTAFFISIVVVQWADLIICKTRRNS 939 (1019)
T ss_pred HHHHHHHHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHH--HHHHhhhhheeeeehHHhHhhHHhhhcchhH
Confidence 66666666443322222111 121 12333211000 0001237999999999999999999999999
Q ss_pred ccccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 001949 900 LLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKS 969 (992)
Q Consensus 900 ~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~ 969 (992)
+|.++ ++||.+++++++.+++.++++|+|++...+++.|+.+.+|+..++++++.++.||++|+++|+|
T Consensus 940 lfqqG-mrN~vl~f~v~~e~~La~fl~y~pg~~~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 940 IFQQG-MRNKVLIFAVIFETCLACFLCYCPGVLYALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred HHHhh-hhhhhHHHHHHHHHHHHHHHhcCccHHHHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 99988 7899999999999999999999999999999999999999999999999999999999999988
No 13
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=1e-114 Score=1084.32 Aligned_cols=831 Identities=22% Similarity=0.269 Sum_probs=647.3
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHH
Q 001949 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (992)
Q Consensus 21 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~ 100 (992)
..|||++|+++|+++||+|+++.++ +++|+.++++|.+|++++++++.+++++. .+|+++++++++++++
T Consensus 137 ~~GLs~~e~~~r~~~yG~N~i~~~~-~s~~~ll~~~~~~p~~i~~i~~~~l~~~~---------~~~~~~~~i~~i~~~~ 206 (1054)
T TIGR01657 137 SNGLTTGDIAQRKAKYGKNEIEIPV-PSFLELLKEEVLHPFYVFQVFSVILWLLD---------EYYYYSLCIVFMSSTS 206 (1054)
T ss_pred ccCCCHHHHHHHHHhcCCCeeecCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------hhHHHHHHHHHHHHHH
Confidence 4699999999999999999999865 68999999999999999988876665532 4578899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEec--CCCccCCceeeeeecCCceEEeccccc
Q 001949 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVN--VGCKIPADMRMIEMLSNQLRVDQAILT 178 (992)
Q Consensus 101 ~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~--~G~~iPaD~~ll~~~~g~~~Vdes~Lt 178 (992)
..+..++++|+.+.++++.. .+..++|+|||++++|+++||||||||.|+ +||+|||||+|++ |++.||||+||
T Consensus 207 ~~~~~~~~~k~~~~L~~~~~-~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll~---g~~~VdES~LT 282 (1054)
T TIGR01657 207 ISLSVYQIRKQMQRLRDMVH-KPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLLS---GSCIVNESMLT 282 (1054)
T ss_pred HHHHHHHHHHHHHHHHHhhc-CCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEEe---CcEEEeccccc
Confidence 99999999999998888765 467899999999999999999999999999 9999999999995 68999999999
Q ss_pred CCCccccccccccc--c---cccccCCCCceeeecceEee-------ceEEEEEEEecccccchhHHHHhccCCCCCCch
Q 001949 179 GESCSVEKELDSII--A---TNAVYQDKTNILFSGTVVVA-------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (992)
Q Consensus 179 GEs~pv~K~~~~~~--~---~~~~~~~~~n~l~~Gt~v~~-------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 246 (992)
|||.|+.|.+.+.. . ......+++|++|+||.+++ |.+.++|++||.+|..|++.+++..++...+++
T Consensus 283 GES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~T~~G~i~~~i~~~~~~~~~~ 362 (1054)
T TIGR01657 283 GESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKF 362 (1054)
T ss_pred CCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCccccchHHHHHhhCCCCCCCch
Confidence 99999999875321 1 11223467899999999995 789999999999999999999999888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcc
Q 001949 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (992)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~ 326 (992)
++...++...+..++++.++++++..... . ..+...+..+++++++++|++||++++++++.+.+||+|++
T Consensus 363 ~~~~~~~~~~l~~~a~i~~i~~~~~~~~~--~-------~~~~~~~l~~l~iiv~~vP~~LP~~~ti~l~~~~~rL~k~~ 433 (1054)
T TIGR01657 363 YKDSFKFILFLAVLALIGFIYTIIELIKD--G-------RPLGKIILRSLDIITIVVPPALPAELSIGINNSLARLKKKG 433 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHc--C-------CcHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHHHHHCC
Confidence 99988887766555443333333222111 1 12345677789999999999999999999999999999999
Q ss_pred cccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchH
Q 001949 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (992)
Q Consensus 327 i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (992)
++||++.++|++|++|++|||||||||+|+|+|.+++..+..... ... ..+ .....
T Consensus 434 il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~--------~~~--------~~~--------~~~~~ 489 (1054)
T TIGR01657 434 IFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEF--------LKI--------VTE--------DSSLK 489 (1054)
T ss_pred EEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCcccc--------ccc--------ccc--------ccccC
Confidence 999999999999999999999999999999999999865321100 000 000 00011
Q ss_pred HHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEe
Q 001949 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (992)
Q Consensus 407 ~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (992)
...+..+++.||+..... + ...|||+|.|+++++ |+............ ....... ......+++++++
T Consensus 490 ~~~~~~~~a~C~~~~~~~----~--~~~Gdp~E~al~~~~---~~~~~~~~~~~~~~--~~~~~i~-~~~~~~~~~il~~ 557 (1054)
T TIGR01657 490 PSITHKALATCHSLTKLE----G--KLVGDPLDKKMFEAT---GWTLEEDDESAEPT--SILAVVR-TDDPPQELSIIRR 557 (1054)
T ss_pred chHHHHHHHhCCeeEEEC----C--EEecCHHHHHHHHhC---CCEEECCCCccccc--cccccee-ccCCCceEEEEEE
Confidence 223556678899875321 2 467999999999875 22211100000000 0000000 0001247889999
Q ss_pred ecCCCCCceEEEEEeeC--CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcc
Q 001949 487 LEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (992)
Q Consensus 487 ~~F~s~~k~msviv~~~--~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 564 (992)
+||+|++|||||+++.+ +++++|+|||||.|+++|++.. .++.+.+.+++|+. +|+||+|+|||
T Consensus 558 ~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~-------------~p~~~~~~~~~~a~-~G~RVLalA~k 623 (1054)
T TIGR01657 558 FQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPET-------------VPSDYQEVLKSYTR-EGYRVLALAYK 623 (1054)
T ss_pred EeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcC-------------CChhHHHHHHHHHh-cCCEEEEEEEe
Confidence 99999999999999874 4578999999999999997411 13457788899998 99999999999
Q ss_pred cCCcccc----cCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc--
Q 001949 565 QMPINRQ----TLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD-- 637 (992)
Q Consensus 565 ~l~~~~~----~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-- 637 (992)
+++..+. ....+ .|+||+|+|+++|+||+||+++++|++|+++||+++|+|||++.||.++|+++||......
T Consensus 624 ~l~~~~~~~~~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~~~vi 703 (1054)
T TIGR01657 624 ELPKLTLQKAQDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNTLI 703 (1054)
T ss_pred ecCccchhhhhhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCceEE
Confidence 9873211 11223 7899999999999999999999999999999999999999999999999999999754310
Q ss_pred -----------------------------------------------cccccccchhhhc---CCHHHHHHHhcceeEEe
Q 001949 638 -----------------------------------------------FVGRSYTASEFEE---LPAMQQTVALQHMALFT 667 (992)
Q Consensus 638 -----------------------------------------------~~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~ 667 (992)
....+++|++++. +.++++.+.+.+..|||
T Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~~~~~~l~~~~~~~~VfA 783 (1054)
T TIGR01657 704 LAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRLLSHTTVFA 783 (1054)
T ss_pred EeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHHhhHHHHHHHHhcCeEEE
Confidence 0014667777654 34567778888999999
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHH
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNT 747 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i 747 (992)
|++|+||.++|+.+|+.|+.|+|+|||+||+||||+||||||||++ + |..+||+++.++++.+++.+|++||+++.|+
T Consensus 784 R~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-d-as~AA~f~l~~~~~~~I~~~I~eGR~~l~~~ 861 (1054)
T TIGR01657 784 RMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-E-ASVAAPFTSKLASISCVPNVIREGRCALVTS 861 (1054)
T ss_pred ecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc-c-ceeecccccCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999864 2 4588999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHH
Q 001949 748 KQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRY 827 (992)
Q Consensus 748 ~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~ 827 (992)
+++++|++.+++..++..++..+ .+.|++++|++|+|++++++++++|+.++|.+++|+++|+ ++++++.++.++
T Consensus 862 ~~~~~~~~~~~~~~~~~~~~l~~--~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P~---~~l~~~~~~~si 936 (1054)
T TIGR01657 862 FQMFKYMALYSLIQFYSVSILYL--IGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERPP---SNLFSVYILTSV 936 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--ccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCCC---ccccCHHHHHHH
Confidence 99999999999988766555443 3478999999999999999999999999999999999884 689998887776
Q ss_pred HHHHHHHH------HHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCccc
Q 001949 828 LVIGGFIW------WYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLL 901 (992)
Q Consensus 828 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~ 901 (992)
+..+++.. |+.... ..|+.... .. +... .+.....+|++| .++..|.+..+.+++. +++|
T Consensus 937 ~~q~~i~~~~~~~~~~~~~~----~~~~~~~~------~~-~~~~-~~~~~~~~T~~f-~~~~~~~~~~~~~~~~-g~pf 1002 (1054)
T TIGR01657 937 LIQFVLHILSQVYLVFELHA----QPWYKPEN------PV-DLEK-ENFPNLLNTVLF-FVSSFQYLITAIVNSK-GPPF 1002 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHhh----CCCccCCC------CC-Cccc-ccCccHHHHHHH-HHHHHHHHHheEEEcC-Ccch
Confidence 65552211 111110 01110000 00 0000 111122367878 5566677777778774 8889
Q ss_pred ccCCCcchhhHHHHHHHHHHHHH-HH-hccccccceecccCChhhHH
Q 001949 902 VIPPWSNLWLVASIILTMFLHIL-IL-YVPPLSVLFSVTPLSWADWT 946 (992)
Q Consensus 902 ~~~~~~N~~l~~~i~~~~~l~~~-~~-~~p~~~~~f~~~~l~~~~w~ 946 (992)
+.++++|+++++++++.+++++. ++ ++|+++.+|++.++|. .|-
T Consensus 1003 ~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~ 1048 (1054)
T TIGR01657 1003 REPIYKNKPFVYLLITGLGLLLVLLLDPHPLLGKILQIVPLPQ-EFR 1048 (1054)
T ss_pred hhhHHHhHHHHHHHHHHHHHHHHhhhCCCHHHHhhheeeeCCH-HHH
Confidence 99999999999998888776653 23 6899999999999985 443
No 14
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=4.6e-113 Score=1033.50 Aligned_cols=745 Identities=28% Similarity=0.428 Sum_probs=617.3
Q ss_pred CCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHH
Q 001949 23 GLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAA 102 (992)
Q Consensus 23 GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~ 102 (992)
|||++||++|+++||+|+++.++ .+.|+.++++|++|+.+++++++++++++ ..|.++++++++++++..
T Consensus 1 GLs~~ea~~r~~~~G~N~~~~~~-~~~~~~~~~~~~~~~~~lL~~aa~~s~~~---------~~~~~~~~i~~~~~i~~~ 70 (755)
T TIGR01647 1 GLTSAEAKKRLAKYGPNELPEKK-VSPLLKFLGFFWNPLSWVMEAAAIIAIAL---------ENWVDFVIILGLLLLNAT 70 (755)
T ss_pred CcCHHHHHHHHHhcCCCCCCCCC-CCHHHHHHHHHhchHHHHHHHHHHHHHhh---------cchhhhhhhhhhhHHHHH
Confidence 89999999999999999999855 45789999999999999999999999876 367888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCc
Q 001949 103 VGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESC 182 (992)
Q Consensus 103 ~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~ 182 (992)
++++||+|+++.+++|+++.+.+++|+|||++++|+++||||||+|.+++||+|||||++++ +..+.||||+|||||.
T Consensus 71 i~~~qe~~a~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~--g~~~~VDeS~LTGES~ 148 (755)
T TIGR01647 71 IGFIEENKAGNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFE--GDYIQVDQAALTGESL 148 (755)
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEe--cCceEEEcccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999996 3349999999999999
Q ss_pred ccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHH
Q 001949 183 SVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIA 262 (992)
Q Consensus 183 pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 262 (992)
|+.|.+ +|.+|+||.+.+|+++++|++||.+|.+|++.+.+.+.+.+++|+++.+++++.+++++++
T Consensus 149 PV~K~~-------------~~~v~aGT~v~~G~~~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~ 215 (755)
T TIGR01647 149 PVTKKT-------------GDIAYSGSTVKQGEAEAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIG 215 (755)
T ss_pred ceEecc-------------CCeeeccCEEEccEEEEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHH
Confidence 999986 5789999999999999999999999999999999988888889999999999999998888
Q ss_pred HHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceE
Q 001949 263 GICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (992)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~ 342 (992)
+++++.++++..... .++...+.+++++++++|||+||++++++++.++++|+|+|+++|+++++|+||++|
T Consensus 216 ~~~~i~~~~~~~~~~--------~~~~~~~~~~i~vlv~a~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~ 287 (755)
T TIGR01647 216 VLVLIELVVLFFGRG--------ESFREGLQFALVLLVGGIPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMD 287 (755)
T ss_pred HHHHHHHHHHHHHcC--------CCHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCc
Confidence 887777766544221 123455777899999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHHHhhhcccccc
Q 001949 343 VICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVL 422 (992)
Q Consensus 343 ~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~ 422 (992)
++|||||||||+|+|+|.+++..+... ..+ +++..+++|++.
T Consensus 288 ~i~~DKTGTLT~~~~~v~~~~~~~~~~---------------------------------~~~---~~l~~a~~~~~~-- 329 (755)
T TIGR01647 288 ILCSDKTGTLTLNKLSIDEILPFFNGF---------------------------------DKD---DVLLYAALASRE-- 329 (755)
T ss_pred EEEecCCCccccCceEEEEEEecCCCC---------------------------------CHH---HHHHHHHHhCCC--
Confidence 999999999999999999987542100 111 223333445421
Q ss_pred ccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEee
Q 001949 423 QYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSH 502 (992)
Q Consensus 423 ~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~ 502 (992)
..+||.|.|+++++++.+. ....++++..+||++.+|+|+++++.
T Consensus 330 ----------~~~~pi~~Ai~~~~~~~~~-------------------------~~~~~~~~~~~pf~~~~k~~~~~v~~ 374 (755)
T TIGR01647 330 ----------EDQDAIDTAVLGSAKDLKE-------------------------ARDGYKVLEFVPFDPVDKRTEATVED 374 (755)
T ss_pred ----------CCCChHHHHHHHHHHHhHH-------------------------HHhcCceEEEeccCCCCCeEEEEEEe
Confidence 1269999999998765320 12246678899999999999999876
Q ss_pred C--CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCC
Q 001949 503 K--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKD 580 (992)
Q Consensus 503 ~--~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~ 580 (992)
+ ++.++++||+||.++++|++. .+.++++.+.+++++. +|+|++++|+++ .|.+
T Consensus 375 ~~~g~~~~~~kGa~e~il~~c~~~------------~~~~~~~~~~~~~~~~-~G~rvl~vA~~~-----------~e~~ 430 (755)
T TIGR01647 375 PETGKRFKVTKGAPQVILDLCDNK------------KEIEEKVEEKVDELAS-RGYRALGVARTD-----------EEGR 430 (755)
T ss_pred CCCceEEEEEeCChHHHHHhcCCc------------HHHHHHHHHHHHHHHh-CCCEEEEEEEEc-----------CCCC
Confidence 3 567789999999999999641 2345667888889998 999999999973 2578
Q ss_pred cEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHh
Q 001949 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (992)
Q Consensus 581 l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (992)
++|+|+++++||+||+++++|++||++||+++|+|||++.+|.++|+++||..... ......++.+.+.++++++.+.+
T Consensus 431 l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~~~-~~~~l~~~~~~~~~~~~~~~~~~ 509 (755)
T TIGR01647 431 WHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIY-TADVLLKGDNRDDLPSGELGEMV 509 (755)
T ss_pred cEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCc-CHHHhcCCcchhhCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999975311 11223445566778888999999
Q ss_pred cceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHH
Q 001949 661 QHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (992)
Q Consensus 661 ~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 740 (992)
.+..+|||++|+||.++|+.+|++|++|+|+|||.||+|||++||||||||+|++.+|++||+|++++++.+++.++++|
T Consensus 510 ~~~~vfAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm~~gtdvAkeaADivLl~d~l~~I~~ai~~g 589 (755)
T TIGR01647 510 EDADGFAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAGATDAARSAADIVLTEPGLSVIVDAILES 589 (755)
T ss_pred HhCCEEEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEecCCcHHHHHhCCEEEEcCChHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccc
Q 001949 741 RAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVT 820 (992)
Q Consensus 741 R~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~ 820 (992)
|+++.|+++++.|.++.|+..+++.+++.++ ++.|++|+|++|+|+++|+ |+++++++++++. ++| +...+.
T Consensus 590 R~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~-~~~~l~~~~il~~~l~~d~-~~~~l~~~~~~~~---~~p---~~~~~~ 661 (755)
T TIGR01647 590 RKIFQRMKSYVIYRIAETIRIVFFFGLLILI-LNFYFPPIMVVIIAILNDG-TIMTIAYDNVKPS---KLP---QRWNLR 661 (755)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHH-hCcchhHHHHHHHHHHHhH-hHhhccCCCCCCC---CCC---CccchH
Confidence 9999999999999999999988777666543 2235999999999999995 7999999998752 333 333333
Q ss_pred hHHHHHHHHHHH------HHHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhc
Q 001949 821 GWLFFRYLVIGG------FIWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNL 894 (992)
Q Consensus 821 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~ 894 (992)
..+...+..|. |..+++.+.+. .+..... ... .....+|+.|..+++.|.++.|++|
T Consensus 662 -~~~~~~~~~g~~~~~~~~~~~~~~~~~~---~~~~~~~------------~~~-~~~~~~t~~f~~~~~~~~~~~~~~r 724 (755)
T TIGR01647 662 -EVFTMSTVLGIYLVISTFLLLAIALDTS---FFIDKFG------------LQL-LHGNLQSLIYLQVSISGQATIFVTR 724 (755)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHhcc---cchhccc------------ccc-cHhhhHHHHHHHHHHHHHHHHheec
Confidence 33333344441 22222211100 0000000 000 0124589999999999999999999
Q ss_pred cCCCcccccCCCcchhhHHHHHHHHHHHHHHH
Q 001949 895 SENQSLLVIPPWSNLWLVASIILTMFLHILIL 926 (992)
Q Consensus 895 ~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~ 926 (992)
+++.++.. +.++++++++++.+++..++.
T Consensus 725 ~~~~~~~~---~p~~~l~~~~~~~~~~~~~~~ 753 (755)
T TIGR01647 725 THGFFWSE---RPGKLLFIAFVIAQIIATFIA 753 (755)
T ss_pred cCCCCccc---CCcHHHHHHHHHHHHHHHHHh
Confidence 96655432 357888888888887776554
No 15
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=1.7e-109 Score=1041.32 Aligned_cols=889 Identities=20% Similarity=0.239 Sum_probs=657.8
Q ss_pred cCCCCCCCCcCccH---HHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHH
Q 001949 36 YGKNVLPQEKRTAF---WKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAE 112 (992)
Q Consensus 36 ~G~N~i~~~~~~~~---~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~ 112 (992)
|.+|.+.+.|++.+ ++.+++||+++++++|++++++++++.+.... .+...+.++++++++...+.+++++++
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~----~~t~~~pL~~v~~~~~~~~~~ed~~r~ 76 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTY----RGTSIVPLAFVLIVTAIKEAIEDIRRR 76 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCC----ccHhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 67899999998875 89999999999999999999999987544211 122233344444566667777777776
Q ss_pred HHHHHHHhcCCCceEEEEC-CEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecC--CceEEecccccCCCcccccccc
Q 001949 113 KALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (992)
Q Consensus 113 ~~~~~l~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LtGEs~pv~K~~~ 189 (992)
++-++ .+...++|+|+ |++++++|+||+|||+|+|++||+||||++++++++ |.|+||||+|||||.|+.|.+.
T Consensus 77 ~~d~~---~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~ 153 (1057)
T TIGR01652 77 RRDKE---VNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQAL 153 (1057)
T ss_pred HhHHH---HhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecc
Confidence 66553 45678999997 899999999999999999999999999999998654 7799999999999999999864
Q ss_pred cccc-------------------c----------------ccccCCCCceeeecceEee-ceEEEEEEEecccccchhHH
Q 001949 190 SIIA-------------------T----------------NAVYQDKTNILFSGTVVVA-GRARAVVVGVGANTAMGSIR 233 (992)
Q Consensus 190 ~~~~-------------------~----------------~~~~~~~~n~l~~Gt~v~~-g~~~~~V~~tG~~T~~g~i~ 233 (992)
.... + .....+.+|++++||.+.+ |+++|+|++||.+|.+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~-- 231 (1057)
T TIGR01652 154 EETQKMLDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMR-- 231 (1057)
T ss_pred hhhhccCChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhh--
Confidence 2210 0 1123456799999999999 999999999999996654
Q ss_pred HHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC----CCC-------ccchHHHHHHHHHHHHHHHHh
Q 001949 234 DSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD----PSH-------GGFLRGAIHYFKIAVALAVAA 302 (992)
Q Consensus 234 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-------~~~~~~~~~~~~~~i~l~~~~ 302 (992)
+....+.+.++++++++++..+++.+.+++|++++++...+... .++ .++....+..+..++.++..+
T Consensus 232 -n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~ 310 (1057)
T TIGR01652 232 -NATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSL 310 (1057)
T ss_pred -cCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhh
Confidence 45566778899999999999988888888888777765433211 111 011123444677888999999
Q ss_pred cCCchHHHHHHHHHHhh------hhhhhc----ccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCC
Q 001949 303 IPEGLPAVVTTCLALGT------KRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGP 372 (992)
Q Consensus 303 iP~~L~~~~~~~~~~~~------~~l~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~ 372 (992)
+|++|++++++++.+++ .+|.++ ++.+|+.+++|+||+|++||+|||||||+|+|+++++++.+..+...
T Consensus 311 IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~ 390 (1057)
T TIGR01652 311 IPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDG 390 (1057)
T ss_pred cceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCC
Confidence 99999999999999999 777764 49999999999999999999999999999999999999876544321
Q ss_pred ceeEEe--ecCcc-cCCCC-------c--cccCCCcc---ccCCCCchHHHHHHHHhhhccccccccCCCC--CCceecc
Q 001949 373 IIAEYG--VTGTT-YAPEG-------V--VFDSSGIQ---LEFPAQLPCLLHIARCSALCNESVLQYNPDK--GNYEKIG 435 (992)
Q Consensus 373 ~~~~~~--~~~~~-~~~~~-------~--~~~~~~~~---~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~--~~~~~~~ 435 (992)
...... .++.. +.+.. . .+.+.... .......+.+.+++.++++||++.+..+.++ ...+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~ 470 (1057)
T TIGR01652 391 FTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAA 470 (1057)
T ss_pred cchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEcc
Confidence 000000 00000 00000 0 00000000 0001123456778899999999876542221 2346679
Q ss_pred ChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeC-CeEEEEEeCCh
Q 001949 436 EATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAP 514 (992)
Q Consensus 436 ~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~~~~KGa~ 514 (992)
+|+|.|++++|+..|+.+..++.+.+...... .....+|++++.+||+|+||||||+++++ +++++|+||||
T Consensus 471 sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~-------~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA~ 543 (1057)
T TIGR01652 471 SPDEAALVKAARDVGFVFFERTPKSISLLIEM-------HGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGAD 543 (1057)
T ss_pred CCcHHHHHHHHHHCCCEEEEecCCceEEEEEe-------CCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCcH
Confidence 99999999999999988765544322211110 11245799999999999999999999985 46899999999
Q ss_pred HHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCccccc---------------------C
Q 001949 515 ESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT---------------------L 573 (992)
Q Consensus 515 e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~---------------------~ 573 (992)
|.|+++|+.. +++.++++.+.+++|+. +|+||+++|||+++.++.. .
T Consensus 544 e~il~~~~~~-----------~~~~~~~~~~~~~~~a~-~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 544 TVIFKRLSSG-----------GNQVNEETKEHLENYAS-EGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHhhcc-----------chhHHHHHHHHHHHHHH-cCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 9999999641 23456778899999998 9999999999999754210 0
Q ss_pred ccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc--------------
Q 001949 574 SYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF-------------- 638 (992)
Q Consensus 574 ~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~-------------- 638 (992)
.++ +|+|++|+|+++++||+|++++++|++|++|||++||+|||+.+||.++|++||+.......
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 012 68999999999999999999999999999999999999999999999999999998754310
Q ss_pred -----------------------ccccccchhhhcCCHHH----HHHHhc--ceeEEeecChhhHHHHHHHHhhc-CCEE
Q 001949 639 -----------------------VGRSYTASEFEELPAMQ----QTVALQ--HMALFTRVEPSHKRMLVEALQNQ-NEVV 688 (992)
Q Consensus 639 -----------------------~~~~~~~~~~~~~~~~~----~~~~~~--~~~v~~r~~p~~K~~iv~~l~~~-~~~v 688 (992)
...+++|++++.+.+++ +..... +..||||++|+||.++|+.+|+. |++|
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~v 771 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeE
Confidence 01367777776444332 233333 44699999999999999999998 9999
Q ss_pred EEEcCCcCCHHHHhhCCeeEEe-cCCcHHHHhccCeeecCCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 689 AMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLADDNFATIVAAV-AEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (992)
Q Consensus 689 ~~iGDg~ND~~~l~~A~vgIa~-g~~~~~~~~~ad~vl~~~~~~~i~~~i-~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (992)
+|+|||+||++|||+|||||++ |....+|+.+||+++.+ +..+..++ .|||++|.|+++++.|.+++|+..+++++
T Consensus 772 l~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~~--F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~ 849 (1057)
T TIGR01652 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQ--FRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQF 849 (1057)
T ss_pred EEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhhh--HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997 45555799999999986 77888876 89999999999999999999999999999
Q ss_pred HHHHhcCC---CCchHHHHHHHHHHHhhhhhhhhccCCC--CccccccCCC----CCCCCccchHHHHHHHHHHHH---H
Q 001949 767 VAAVLGIP---DTLAPVQLLWVNLVTDGLPATAIGFNKQ--DSDVMKAKPR----KVSEAVVTGWLFFRYLVIGGF---I 834 (992)
Q Consensus 767 ~~~~~~~~---~~l~~~~~l~~~~~~~~~p~~~l~~~~~--~~~~~~~~P~----~~~~~~~~~~~~~~~~~~~~~---~ 834 (992)
++.+++.+ +++.+++++|+|+++|++|++++|.++. ++++|.++|+ .++++.++.+.|+.|++.|++ +
T Consensus 850 ~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~i 929 (1057)
T TIGR01652 850 WYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLV 929 (1057)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 98887544 3688899999999999999999987544 4789999997 567888998888888777633 2
Q ss_pred HHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHH
Q 001949 835 WWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVAS 914 (992)
Q Consensus 835 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~ 914 (992)
.+++.+.. +.+......| ...+....++++|+++++...+..+..-+ .| +|+.+++
T Consensus 930 i~~~~~~~---~~~~~~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~w-t~~~~~~ 985 (1057)
T TIGR01652 930 IFFFPMFA---YILGDFVSSG-----------SLDDFSSVGVIVFTALVVIVNLKIALEIN---------RW-NWISLIT 985 (1057)
T ss_pred HHHHHHHH---HcCCccccCC-----------cccchhhHHHHHHHHHHHHHHHHHHHHHh---------Hh-HHHHHHH
Confidence 22221100 0000000001 01111234677888887777766544322 22 3444444
Q ss_pred HHHHHHHHHHHHh----ccc---cccceecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcc
Q 001949 915 IILTMFLHILILY----VPP---LSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKFWFR 979 (992)
Q Consensus 915 i~~~~~l~~~~~~----~p~---~~~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~~p~~~~~~~~ 979 (992)
+++++++.+++.+ .+. +...+.....++.+|+.+++..+++++++.++|+++|.++|++++++++
T Consensus 986 ~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 986 IWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHhhC
Confidence 4455544433321 111 1112223334688999999999999999999999999999999998754
No 16
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=1.8e-106 Score=998.98 Aligned_cols=885 Identities=19% Similarity=0.202 Sum_probs=646.1
Q ss_pred hcCCCCCCCCcCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHHHHHHHHH
Q 001949 35 IYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNA 111 (992)
Q Consensus 35 ~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~ 111 (992)
+|..|.+.+.|++. +++.+++||+++.+++|++++++++++.+.... ....+ +.+++++++..+.+.+.+++.
T Consensus 86 ~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~-~~t~~---~PL~~vl~v~~ike~~Ed~~r 161 (1178)
T PLN03190 86 EFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFG-RGASI---LPLAFVLLVTAVKDAYEDWRR 161 (1178)
T ss_pred cCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCC-cchHH---HHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999875 678889999999999999999999887554311 22223 333333344444444444444
Q ss_pred HHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecC--CceEEecccccCCCcccccccc
Q 001949 112 EKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLS--NQLRVDQAILTGESCSVEKELD 189 (992)
Q Consensus 112 ~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~--g~~~Vdes~LtGEs~pv~K~~~ 189 (992)
+++-++ .++..++|+|+|++++++|++|+|||+|++++||++|||++++++++ |.|+||||+|||||.|+.|.+.
T Consensus 162 ~k~d~~---~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGEt~~k~k~~~ 238 (1178)
T PLN03190 162 HRSDRI---ENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAK 238 (1178)
T ss_pred HHhHHh---hcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCeeeeeEeccc
Confidence 443332 35678999999999999999999999999999999999999997553 7899999999999999999765
Q ss_pred cccc-----------------c---------------ccccCCCCceeeecceEeec-eEEEEEEEecccccchhHHHHh
Q 001949 190 SIIA-----------------T---------------NAVYQDKTNILFSGTVVVAG-RARAVVVGVGANTAMGSIRDSM 236 (992)
Q Consensus 190 ~~~~-----------------~---------------~~~~~~~~n~l~~Gt~v~~g-~~~~~V~~tG~~T~~g~i~~~~ 236 (992)
+... + .....+.+|++++||.+.+. .++|+|++||.+|. ++.+.
T Consensus 239 ~~~~~~~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~~~~~~l~~~n~llRG~~LrnT~~i~GvVVYTG~dTK---~~~N~ 315 (1178)
T PLN03190 239 QETLSKIPEKEKINGLIKCEKPNRNIYGFQANMEVDGKRLSLGPSNIILRGCELKNTAWAIGVAVYCGRETK---AMLNN 315 (1178)
T ss_pred chhhhcchhhhhceEEEEEeCCCccceeEEEEEEECCCcccCCccceeeccceecCCceEEEEEEEechhhh---HhhcC
Confidence 3211 0 01123457899999999986 69999999999995 55555
Q ss_pred ccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc----CCCCccc-------------------hHHHHHHHH
Q 001949 237 LQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFR----DPSHGGF-------------------LRGAIHYFK 293 (992)
Q Consensus 237 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-------------------~~~~~~~~~ 293 (992)
..++.+.+++++++|++..+++.+.+++|+++.++...+.. +.++..| ....+..+.
T Consensus 316 ~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~ 395 (1178)
T PLN03190 316 SGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFL 395 (1178)
T ss_pred CCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhHHHHHHHH
Confidence 56667899999999999999888888888777665432211 0000000 011133344
Q ss_pred HHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcc----------cccccccccccccceEEEEecCCCccccCceEEEEEE
Q 001949 294 IAVALAVAAIPEGLPAVVTTCLALGTKRMARLN----------AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKIC 363 (992)
Q Consensus 294 ~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~----------i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~ 363 (992)
.++.++..++|++|++++++++..++.++.++. +.||+.+.+|+||+|++||+|||||||+|+|++++|+
T Consensus 396 ~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT~N~M~fk~~~ 475 (1178)
T PLN03190 396 MSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCAS 475 (1178)
T ss_pred HHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccccceEEEEEEE
Confidence 556777899999999999999999888887654 7899999999999999999999999999999999999
Q ss_pred EeccccCCCcee------EE--eecCcccCCCCccccCCCc-----cccCCCCchHHHHHHHHhhhccccccccCCC--C
Q 001949 364 VVHSVQQGPIIA------EY--GVTGTTYAPEGVVFDSSGI-----QLEFPAQLPCLLHIARCSALCNESVLQYNPD--K 428 (992)
Q Consensus 364 ~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~--~ 428 (992)
+.+..+...... .+ ..++..+.+......+... ........+.+.+++.++++||++.+....+ +
T Consensus 476 i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv~~~~~~~~~~ 555 (1178)
T PLN03190 476 IWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTIVPIVVDDTSD 555 (1178)
T ss_pred ECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCceeeccCCCCC
Confidence 977554321000 00 0111111111100000000 0000011234677999999999987642111 1
Q ss_pred ----CCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeC-
Q 001949 429 ----GNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK- 503 (992)
Q Consensus 429 ----~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~- 503 (992)
...|..++|+|.||+++|++.|+.+..|+++.+.....+ ...+|++++.+||+|+||||||+++++
T Consensus 556 ~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~---------~~~~~~il~~~pF~S~rKrMSvIv~~~~ 626 (1178)
T PLN03190 556 PTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHG---------ERQRFNVLGLHEFDSDRKRMSVILGCPD 626 (1178)
T ss_pred ccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeecc---------ceecceeEEEecccccccEEEEEEEcCC
Confidence 123677799999999999999999888877665432222 246799999999999999999999975
Q ss_pred CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCccccc-----------
Q 001949 504 QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQT----------- 572 (992)
Q Consensus 504 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~----------- 572 (992)
+++.+|+|||||.|+++|+... +++.++++.+++++|+. +|+|||++|||.++.++..
T Consensus 627 ~~~~l~~KGA~e~il~~~~~~~----------~~~~~~~~~~~l~~~a~-~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 627 KTVKVFVKGADTSMFSVIDRSL----------NMNVIRATEAHLHTYSS-LGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CcEEEEEecCcHHHHHhhcccc----------cchhHHHHHHHHHHHHh-cCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 5689999999999999996532 22356778889999998 9999999999999753211
Q ss_pred -----------CccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc---
Q 001949 573 -----------LSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF--- 638 (992)
Q Consensus 573 -----------~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~--- 638 (992)
...++|+||+++|+++++|++|++++++|++|+++||++||+|||+.+||.+||++||+.......
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 001268999999999999999999999999999999999999999999999999999997654210
Q ss_pred ------------------------------------------ccccccchhhhcCCH----HHHHHHhc--ceeEEeecC
Q 001949 639 ------------------------------------------VGRSYTASEFEELPA----MQQTVALQ--HMALFTRVE 670 (992)
Q Consensus 639 ------------------------------------------~~~~~~~~~~~~~~~----~~~~~~~~--~~~v~~r~~ 670 (992)
...+++|..+..+.+ +++.++.. +++||||++
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~s 855 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVA 855 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCC
Confidence 014566776665543 23334443 345899999
Q ss_pred hhhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeEEe-cCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHH
Q 001949 671 PSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTK 748 (992)
Q Consensus 671 p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa~-g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~ 748 (992)
|.||+++|+.+|+. +++|+|+|||+||++|||+|||||++ |.++.+|+.+||+++.++++...+.++ |||++|.|+.
T Consensus 856 P~QKa~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlv-HGr~~y~R~s 934 (1178)
T PLN03190 856 PLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLV-HGHWNYQRMG 934 (1178)
T ss_pred HHHHHHHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHH-hCHHHHHHHH
Confidence 99999999999997 58999999999999999999999986 477779999999999999998888888 9999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCC---chHHHHHHHHHHHhhhhhhhhccCCCC--ccccccCCC----CCCCCcc
Q 001949 749 QFIRYMISSNIGEVVCIFVAAVLGIPDT---LAPVQLLWVNLVTDGLPATAIGFNKQD--SDVMKAKPR----KVSEAVV 819 (992)
Q Consensus 749 ~~i~~~~~~ni~~~~~~~~~~~~~~~~~---l~~~~~l~~~~~~~~~p~~~l~~~~~~--~~~~~~~P~----~~~~~~~ 819 (992)
+++.|.||+|++.+++++++.++..+++ +..|.+.++|+++|++|++++|.++.| ++.+.+.|. .++...+
T Consensus 935 ~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~ 1014 (1178)
T PLN03190 935 YMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAY 1014 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCcc
Confidence 9999999999999999999999877764 567888999999999999999999888 677778883 3456678
Q ss_pred chHHHHHHHHHHHH---HHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccC
Q 001949 820 TGWLFFRYLVIGGF---IWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSE 896 (992)
Q Consensus 820 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~ 896 (992)
+.+.|+.|++.|++ +.+|+.+.. +... . .++...+++.+.+.++...+..+...+
T Consensus 1015 n~~~F~~w~~~~i~qs~iiff~~~~~-----~~~~----~------------~~~~~~~~~~~~~~v~~vnl~i~~~~~- 1072 (1178)
T PLN03190 1015 NSKLFWLTMIDTLWQSAVVFFVPLFA-----YWAS----T------------IDGSSIGDLWTLAVVILVNLHLAMDII- 1072 (1178)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCC----C------------cCceeEhHhhhhHHHHHHHHHHHHHHh-
Confidence 88888888777733 222222110 0000 0 000111233344444444444332111
Q ss_pred CCcccccCCCcchhhHHHHHHHHHHHHHHH----hccccccc--eecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001949 897 NQSLLVIPPWSNLWLVASIILTMFLHILIL----YVPPLSVL--FSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSS 970 (992)
Q Consensus 897 ~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~----~~p~~~~~--f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~~ 970 (992)
.| +|+.++++++++++.+++. .+|.+... +.....++.+|+.++++.+++++++.++|+++|.++
T Consensus 1073 --------~w-t~~~~~~i~~Si~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~ 1143 (1178)
T PLN03190 1073 --------RW-NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFT 1143 (1178)
T ss_pred --------hh-hHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 12 3333334444443333222 23322211 112223678999999999999999999999999999
Q ss_pred chhhhhhcccc
Q 001949 971 GMRFKFWFRRH 981 (992)
Q Consensus 971 p~~~~~~~~~~ 981 (992)
|.+++.+++.+
T Consensus 1144 P~~~~~~~~~~ 1154 (1178)
T PLN03190 1144 PCDVQIAREAE 1154 (1178)
T ss_pred CCHHHHHHHHH
Confidence 99999998765
No 17
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-98 Score=845.08 Aligned_cols=885 Identities=23% Similarity=0.301 Sum_probs=627.5
Q ss_pred CCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHH
Q 001949 21 TKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (992)
Q Consensus 21 ~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~ 100 (992)
..||+.+++.+|+..||+|.+..+. ++++.+++++.-+|+..+..+ |+++|..+ .+++.+..|+++.+++
T Consensus 158 ~~gL~~~~~~~r~~iyG~N~i~l~i-k~i~~iLv~EvL~PfYlFQ~f----Sv~lW~~d-----~Y~~YA~cI~iisv~S 227 (1140)
T KOG0208|consen 158 SNGLERQEIIDRRIIYGRNVISLPI-KSISQILVKEVLNPFYLFQAF----SVALWLAD-----SYYYYAFCIVIISVYS 227 (1140)
T ss_pred cCCccHHHHHhHHhhcCCceeeeec-ccHHHHHHHhccchHHHHHhH----Hhhhhhcc-----cchhhhhHHHHHHHHH
Confidence 5799999999999999999999876 568999999999998876644 44444432 3556677888888889
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecC-CCccCCceeeeeecCCceEEecccccC
Q 001949 101 AAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNV-GCKIPADMRMIEMLSNQLRVDQAILTG 179 (992)
Q Consensus 101 ~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~-G~~iPaD~~ll~~~~g~~~Vdes~LtG 179 (992)
..+..++.++..+.++++-+.. ..|+|+|||.|++|.++|||||||+++.+ |-..|||++|+ +|+|.||||+|||
T Consensus 228 i~~sv~e~r~qs~rlr~mv~~~-~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li---~g~civNEsmLTG 303 (1140)
T KOG0208|consen 228 IVLSVYETRKQSIRLRSMVKFT-CPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI---SGDCIVNESMLTG 303 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC-ceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE---eCcEEeecccccC
Confidence 9999999999999888886644 46899999999999999999999999998 89999999999 6999999999999
Q ss_pred CCcccccccccccc------cccccCCCCceeeecceEee------ceEEEEEEEecccccchhHHHHhccCCCCCCchH
Q 001949 180 ESCSVEKELDSIIA------TNAVYQDKTNILFSGTVVVA------GRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLK 247 (992)
Q Consensus 180 Es~pv~K~~~~~~~------~~~~~~~~~n~l~~Gt~v~~------g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~ 247 (992)
||.|+.|.+.+... ........+|.+|+||.+++ +.+.++|++||.+|..|++.+++..++....++-
T Consensus 304 ESVPv~K~~l~~~~~~~~~~~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF~T~KGqLVRsilyPkP~~fkfy 383 (1140)
T KOG0208|consen 304 ESVPVTKTPLPMGTDSLDSITISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGFSTTKGQLVRSILYPKPVNFKFY 383 (1140)
T ss_pred CcccccccCCccccccCcCeeechhhcCcceeeccceEEEeecCCCCceEEEEEeccccccccHHHHhhcCCCCcccHHH
Confidence 99999999865111 12334567899999999986 6699999999999999999999999865555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhccc
Q 001949 248 KKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNA 327 (992)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i 327 (992)
+...+|...+..++++ +++..++.+...+. .....+..++.++...+|++||++++++..++.+||.|+||
T Consensus 384 rds~~fi~~l~~ia~~-gfiy~~i~l~~~g~--------~~~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~I 454 (1140)
T KOG0208|consen 384 RDSFKFILFLVIIALI-GFIYTAIVLNLLGV--------PLKTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGI 454 (1140)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHhHhHHHcCC--------CHHHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCe
Confidence 5444443333322211 12222222212111 12355778889999999999999999999999999999999
Q ss_pred ccccccccccccceEEEEecCCCccccCceEEEEEEEecccc-CCCceeEEeecCcccCCCCccccCCCccccCCCCchH
Q 001949 328 IVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQ-QGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (992)
Q Consensus 328 ~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (992)
+|.++..+...|++|++|||||||||++.+.+..+....... ..+...... ......+. ++..+.....
T Consensus 455 fCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~~~~~~~~~~~~------~~~~~~~~----~l~~~~~~~~ 524 (1140)
T KOG0208|consen 455 FCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERNVDDGPELKVVT------EDSLQLFY----KLSLRSSSLP 524 (1140)
T ss_pred EEcCccceeecceeeEEEEcCCCcccccceeEEEEEeccccccccchhhhhh------hhhcccee----eccccccCCc
Confidence 999999999999999999999999999999999988743221 000000000 00000000 0000111112
Q ss_pred HHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCC------chhh--hh--hhccccc-ccccCc
Q 001949 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDS------MPSA--LN--MLSKHER-ASYCNH 475 (992)
Q Consensus 407 ~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~------~~~~--~~--~~~~~~~-~~~~~~ 475 (992)
...+..+++.||...... + ...|||.|.-+.+ ..|+...+. +... +. ...+... .....+
T Consensus 525 ~~~~~~a~atCHSL~~v~----g--~l~GDPLdlkmfe---~t~w~~ee~~~~~~~~~~~~~~~p~v~~p~~~~~~~~t~ 595 (1140)
T KOG0208|consen 525 MGNLVAAMATCHSLTLVD----G--TLVGDPLDLKMFE---STGWVYEEADIEDEATREFNTLIPTVVRPPENAFNQSTE 595 (1140)
T ss_pred hHHHHHHHhhhceeEEeC----C--eeccCceeeeeee---ccceEEEeccccchhhhhhCCccCCEeCCCcccccCCCc
Confidence 456777888899544321 1 2346777665543 233333111 0000 00 0111110 011111
Q ss_pred cccccccEEEeecCCCCCceEEEEEeeC--CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhc
Q 001949 476 HWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (992)
Q Consensus 476 ~~~~~~~~l~~~~F~s~~k~msviv~~~--~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (992)
..++.+.+++.+||+|..+|||||++++ ++..+|+|||||.|.+.|++... | ..+.+.++.|+.
T Consensus 596 ~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~tv-------P------~dy~evl~~Yt~- 661 (1140)
T KOG0208|consen 596 CGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPETV-------P------ADYQEVLKEYTH- 661 (1140)
T ss_pred CCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcccC-------C------ccHHHHHHHHHh-
Confidence 1233789999999999999999999987 57899999999999999976322 2 337888999998
Q ss_pred cchhhhhhhcccCCccc----ccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH
Q 001949 554 EALRCLALALKQMPINR----QTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (992)
Q Consensus 554 ~g~r~l~~a~~~l~~~~----~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~ 628 (992)
+|+|++|+|+|+++... +...++ +|.|++|+|++.||+++|++++.+|++|++|.||++|+||||..||..+||+
T Consensus 662 ~GfRVIAlA~K~L~~~~~~~~~~~~Rd~vEs~l~FlGLiVmeNkLK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVake 741 (1140)
T KOG0208|consen 662 QGFRVIALASKELETSTLQKAQKLSRDTVESNLEFLGLIVMENKLKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKE 741 (1140)
T ss_pred CCeEEEEEecCccCcchHHHHhhccHhhhhccceeeEEEEeecccccccHHHHHHHHhhcceEEEEcCCchheeeehhhc
Confidence 99999999999998651 224445 8999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCccccc---------------------------------------------------cccccchhhh---cCCHH
Q 001949 629 IGAFDHLVDFV---------------------------------------------------GRSYTASEFE---ELPAM 654 (992)
Q Consensus 629 ~gi~~~~~~~~---------------------------------------------------~~~~~~~~~~---~~~~~ 654 (992)
||+..+...+. ...++|+.+. +...+
T Consensus 742 Cgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~ 821 (1140)
T KOG0208|consen 742 CGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPE 821 (1140)
T ss_pred ccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCccccCCccChhhhccceeEEEecCchhHHHHhhcHH
Confidence 99987643210 0122333332 12345
Q ss_pred HHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHH
Q 001949 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIV 734 (992)
Q Consensus 655 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~ 734 (992)
.+..++.+..|||||+|+||.++|+.+|+.|+.|+|||||+|||.|||+||+||+++. .+|.-||.+.-.-.+..+++
T Consensus 822 l~~~Il~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgALKaAdvGISLSe--aEASvAApFTSk~~~I~cVp 899 (1140)
T KOG0208|consen 822 LVPKILLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGALKAADVGISLSE--AEASVAAPFTSKTPSISCVP 899 (1140)
T ss_pred HHHHHHhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhhhhhcccCcchhh--hhHhhcCccccCCCchhhHh
Confidence 5667777889999999999999999999999999999999999999999999999963 34556789988888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCC
Q 001949 735 AAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKV 814 (992)
Q Consensus 735 ~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~ 814 (992)
+.|+|||+.+.....+++|+..+++..++..++ ++.....+++.|.++++++...+.+++++.+++..++-..+|
T Consensus 900 ~vIrEGRaALVTSf~~FkYMalYs~iqFisv~~--LY~~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP--- 974 (1140)
T KOG0208|consen 900 DVIREGRAALVTSFACFKYMALYSAIQFISVVF--LYLINSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP--- 974 (1140)
T ss_pred HHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhhe--eeeecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---
Confidence 999999999999999999999998776554433 234456799999999999999999999999999988876666
Q ss_pred CCCccchHHHHHHHHHHHHHH---HHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHH
Q 001949 815 SEAVVTGWLFFRYLVIGGFIW---WYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNAL 891 (992)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~ 891 (992)
...+++...+...++.-++++ |..+. -.....|+....+.- .++.. ....|..|..-.+..+++++
T Consensus 975 ~~~L~s~~~~~~l~~q~vli~l~q~i~~l-~~~~qpw~~pp~~~~-----~~nt~-----s~~~T~lF~vS~fqYi~~a~ 1043 (1140)
T KOG0208|consen 975 PTNLLSKKILVPLLLQIVLICLVQWILTL-IVEPQPWYEPPNPQV-----DDNTQ-----SSDNTSLFFVSSFQYIFIAL 1043 (1140)
T ss_pred CccccccchhhhhHHHHHHHHHHHHhhhe-eeccccceecCCCCc-----Ccccc-----cceeeEeeehhHHHHHHhhe
Confidence 445666665544333222211 11111 111122322211110 01111 11123333333333344433
Q ss_pred hhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccc---cceecccCChhhHH-HHHHHHHHHHHHHHHHHHHHh
Q 001949 892 NNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLS---VLFSVTPLSWADWT-AVFYLSFPVIIIDEVLKFFSR 967 (992)
Q Consensus 892 ~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~---~~f~~~~l~~~~w~-~~~~~~~~~l~~~ei~K~~~r 967 (992)
.. ..+++|+.+.|+|+.+...+....+..+.++.++... ..++.++++-.+.- .+++..+..+....+.+-+.+
T Consensus 1044 v~--S~g~pfr~pl~~n~~f~~~i~~i~~~~i~l~~~~~~~~~~~l~~~t~~~~~~~~fii~~~~~~~~~~~~~~~~~~~ 1121 (1140)
T KOG0208|consen 1044 VL--SKGSPFRRPLWKNVLFKVFITVIILSTIYLLFVNYLFIEWKLLQLTYIPTTFDRFIILLVVISYFALNYIQPSVGR 1121 (1140)
T ss_pred ee--ccCCcccCchhcCceeeeehhhHHhhhhhhhhccccchhhhhhceeccCcchhHHHHHHHHHHHHHHHHhhhhhhc
Confidence 22 2578999999999998776666665555555554322 34667776654443 333344444555566665666
Q ss_pred hccchhhhhhcccc
Q 001949 968 KSSGMRFKFWFRRH 981 (992)
Q Consensus 968 ~~~p~~~~~~~~~~ 981 (992)
.+-+...|+..++.
T Consensus 1122 ~~~~~~~~~l~~r~ 1135 (1140)
T KOG0208|consen 1122 MLGDKSMRDLVPRK 1135 (1140)
T ss_pred hhhhHHHHHhcccc
Confidence 66555555555443
No 18
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=100.00 E-value=3.3e-98 Score=888.93 Aligned_cols=896 Identities=20% Similarity=0.227 Sum_probs=663.2
Q ss_pred HHhhcCCCCCCCCcCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHHHHHH
Q 001949 32 HVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITE 108 (992)
Q Consensus 32 r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~~ 108 (992)
+...|-.|.+.+.|++. +++.+++||++..+++|++.+++++++ +. + ...|...+.+++++.++++.+.+.+
T Consensus 28 ~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~-~---~~~~~~~~pl~~vl~~t~iKd~~eD 102 (1151)
T KOG0206|consen 28 PQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LS-P---FNPYTTLVPLLFVLGITAIKDAIED 102 (1151)
T ss_pred hhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-cc-c---cCccceeeceeeeehHHHHHHHHhh
Confidence 55689999999999876 789999999999999999999999988 33 2 2334444555555556665666666
Q ss_pred HHHHHHHHHHHhcCCCceEEEECCE-EEEeeCCCCCCCcEEEecCCCccCCceeeeeec--CCceEEecccccCCCcccc
Q 001949 109 TNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCSVE 185 (992)
Q Consensus 109 ~k~~~~~~~l~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LtGEs~pv~ 185 (992)
+|..+.=. +.+..+++|.|++. +++..|++|++||+|++..++.+|||.++++++ +|.|+|++++|+||++.+.
T Consensus 103 ~rR~~~D~---~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLDGEtnLK~ 179 (1151)
T KOG0206|consen 103 YRRHKQDK---EVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLDGETNLKV 179 (1151)
T ss_pred hhhhhccH---HhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecCCccccce
Confidence 55544333 34555788998644 899999999999999999999999999999755 6789999999999999988
Q ss_pred ccccccccc---------------------------------ccc-cCCCCceeeecceEeece-EEEEEEEecccccch
Q 001949 186 KELDSIIAT---------------------------------NAV-YQDKTNILFSGTVVVAGR-ARAVVVGVGANTAMG 230 (992)
Q Consensus 186 K~~~~~~~~---------------------------------~~~-~~~~~n~l~~Gt~v~~g~-~~~~V~~tG~~T~~g 230 (992)
|........ ... +....|++++|+++.+.. +.|+|+.||++|.+
T Consensus 180 k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~~~~pl~~~~~Llrg~~lrNT~~v~G~vv~tG~dtK~- 258 (1151)
T KOG0206|consen 180 KQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQGQIYPLSPDNLLLRGSRLRNTEWVYGVVVFTGHDTKL- 258 (1151)
T ss_pred eeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeeccCCCCCcHHHcccCCceeccCcEEEEEEEEcCCcchH-
Confidence 865322110 001 445578999999999865 89999999999954
Q ss_pred hHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-------CCCcc---chHHHHHHHHHHHHHHH
Q 001949 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD-------PSHGG---FLRGAIHYFKIAVALAV 300 (992)
Q Consensus 231 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~---~~~~~~~~~~~~i~l~~ 300 (992)
+++...++.+++++++.++.....+..+.+++|++..+....+... .++.. ........+..++.++.
T Consensus 259 --~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~t~~il~~ 336 (1151)
T KOG0206|consen 259 --MQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSEAAYAGFVHFLTFIILYQ 336 (1151)
T ss_pred --HHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCchHHHHHHHHHHHHHhhhh
Confidence 5566668889999999999998888888888877776655443321 00100 11233456777888999
Q ss_pred HhcCCchHHHHHHHHHHhhhhhh----------hcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccC
Q 001949 301 AAIPEGLPAVVTTCLALGTKRMA----------RLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQ 370 (992)
Q Consensus 301 ~~iP~~L~~~~~~~~~~~~~~l~----------~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~ 370 (992)
..+|.+|++++++....++..+. ...+.+|+.+..|+||+|++|++|||||||+|.|++.+|.+.+..+.
T Consensus 337 ~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~yg 416 (1151)
T KOG0206|consen 337 YLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSYG 416 (1151)
T ss_pred ceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCcccc
Confidence 99999999999999999986653 35688999999999999999999999999999999999999987665
Q ss_pred CCceeEE-eecCcc------cCCCCccccCCCccccC---CCCchHHHHHHHHhhhccccccccCCCC-CCceeccChhH
Q 001949 371 GPIIAEY-GVTGTT------YAPEGVVFDSSGIQLEF---PAQLPCLLHIARCSALCNESVLQYNPDK-GNYEKIGEATE 439 (992)
Q Consensus 371 ~~~~~~~-~~~~~~------~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~lc~~~~~~~~~~~-~~~~~~~~p~e 439 (992)
....... ...... ....+..+.+....... ....+...++..++++||+..++.+++. ...|.+.+|+|
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~~~~Y~A~SPDE 496 (1151)
T KOG0206|consen 417 RNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSGKLSYEAESPDE 496 (1151)
T ss_pred cCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCccceeeecCCCcH
Confidence 4211100 000000 00111111111111100 1245566788999999999988764333 45788999999
Q ss_pred HHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeC-CeEEEEEeCChHHHH
Q 001949 440 VALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK-QMCVMFSKGAPESVL 518 (992)
Q Consensus 440 ~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~-~~~~~~~KGa~e~il 518 (992)
.|++..|++.|+.+..|+++.+.....+ .+..|++++.+||+|.|||||||||++ ++..+|||||+..|.
T Consensus 497 ~AlV~aAr~~gf~f~~Rt~~~vti~~~g---------~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~ 567 (1151)
T KOG0206|consen 497 AALVEAARELGFVFLGRTPDSVTIRELG---------VEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIF 567 (1151)
T ss_pred HHHHHHHHhcCceeeeccCceEEEeccc---------cceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhH
Confidence 9999999999999998888776654222 356899999999999999999999986 589999999999999
Q ss_pred HhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccc---------------------cCccc-
Q 001949 519 SRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ---------------------TLSYD- 576 (992)
Q Consensus 519 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~---------------------~~~~~- 576 (992)
++++. -....+++..+++++||. +|+|++|+|||.+++++. ...++
T Consensus 568 erL~~-----------~~~~~~e~T~~Hl~~yA~-eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~ 635 (1151)
T KOG0206|consen 568 ERLSK-----------NGEKLREKTQEHLEEYAT-EGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEE 635 (1151)
T ss_pred hhhhh-----------cchHHHHHHHHHHHHHHh-hhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHH
Confidence 99974 134567788899999998 999999999999985431 01122
Q ss_pred cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------
Q 001949 577 DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------ 638 (992)
Q Consensus 577 ~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------ 638 (992)
+|+||+++|.+++||+++++++++|+.|++||||+||+|||+.+||.+|+..|++..+....
T Consensus 636 iEk~L~LLGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~ 715 (1151)
T KOG0206|consen 636 IEKDLILLGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATA 715 (1151)
T ss_pred HHhcchhhcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHH
Confidence 69999999999999999999999999999999999999999999999999999998764321
Q ss_pred -------------------------ccccccchhhhcCCHH-HHHH-----HhcceeEEeecChhhHHHHHHHHhhc-CC
Q 001949 639 -------------------------VGRSYTASEFEELPAM-QQTV-----ALQHMALFTRVEPSHKRMLVEALQNQ-NE 686 (992)
Q Consensus 639 -------------------------~~~~~~~~~~~~~~~~-~~~~-----~~~~~~v~~r~~p~~K~~iv~~l~~~-~~ 686 (992)
.+.+++|..+....+. +... .-.+.+++||++|.||+.+|+..++. +.
T Consensus 716 ~~~~~l~~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~ 795 (1151)
T KOG0206|consen 716 ALKETLLRKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKA 795 (1151)
T ss_pred HHHHHHHHhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCc
Confidence 1234444444332222 1111 12366899999999999999999754 88
Q ss_pred EEEEEcCCcCCHHHHhhCCeeEEec-CCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 687 VVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (992)
Q Consensus 687 ~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (992)
.+++||||+||++|+|+|||||+++ .+..+|..+||+.+.++.+...+.++ |||+.|.|+.+++.|.||+|+...+.+
T Consensus 796 ~TLAIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLV-HGhW~Y~R~a~~ilyfFYKNi~f~~~~ 874 (1151)
T KOG0206|consen 796 VTLAIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLV-HGHWSYIRLAKMILYFFYKNIAFTFTL 874 (1151)
T ss_pred eEEEeeCCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhhee-ecceeHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999975 99999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHHhcCCC---CchHHHHHHHHHHHhhhhhhhhccCCCC--ccccccCCCC----CCCCccchHHHHHHHHHHHHHHH
Q 001949 766 FVAAVLGIPD---TLAPVQLLWVNLVTDGLPATAIGFNKQD--SDVMKAKPRK----VSEAVVTGWLFFRYLVIGGFIWW 836 (992)
Q Consensus 766 ~~~~~~~~~~---~l~~~~~l~~~~~~~~~p~~~l~~~~~~--~~~~~~~P~~----~~~~~~~~~~~~~~~~~~~~~~~ 836 (992)
+++.++..++ .+.+|++.++|++++.+|++++|.+++| .+.+.+.|.. ++.-.++...|+.|++.|.+...
T Consensus 875 fwy~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sl 954 (1151)
T KOG0206|consen 875 FWYQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSL 954 (1151)
T ss_pred HHhhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhhe
Confidence 9999986654 6788999999999999999999999988 5777788854 33445566677777777744322
Q ss_pred HHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHH
Q 001949 837 YVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASII 916 (992)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~ 916 (992)
.+++.....+........|. ..+....++.+|+++|+...+.. .+....| +|+-++++.
T Consensus 955 i~Ff~~~~~~~~~~~~~~G~-----------~~d~~~~G~~~~T~~Vivv~~~i---------aL~~~yw-T~i~~i~i~ 1013 (1151)
T KOG0206|consen 955 VIFFLPYLVFEEQAVTSNGL-----------TADYWTLGTTVFTIIVIVVNLKI---------ALETSYW-TWINHIVIW 1013 (1151)
T ss_pred eeeeeeHhhheeeeeccCCC-----------cCChhhccceEEEEEEEEEEeee---------eeeehhe-eHHHHHHHH
Confidence 22111000011110000010 00001113333333332222211 1112222 333334444
Q ss_pred HHHHHHHHHHh-----ccccc------cceecccCChhhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcccc
Q 001949 917 LTMFLHILILY-----VPPLS------VLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFFSRKSSGMRFKFWFRRH 981 (992)
Q Consensus 917 ~~~~l~~~~~~-----~p~~~------~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~~r~~~p~~~~~~~~~~ 981 (992)
+++++.+++.+ .|.+. ..+.....++.+|+.+++.++++++|+.++|.+.+.++|++.+++++.+
T Consensus 1014 gSi~~~f~f~~iy~~~~~~~~~~~~~~~~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~ 1089 (1151)
T KOG0206|consen 1014 GSILLWFVFLFIYSELTPAISTPDPFYGVAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIE 1089 (1151)
T ss_pred HHHHHHHHHHHHHhccccccCCCccHHHHHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHH
Confidence 44444433332 12221 2223334578899999999999999999999999999999999999865
No 19
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-93 Score=769.45 Aligned_cols=861 Identities=20% Similarity=0.236 Sum_probs=640.8
Q ss_pred HHHhhcCCCCCCCCcCcc---HHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccch-hhHHHHHHHHHHHHHHHH
Q 001949 31 RHVRIYGKNVLPQEKRTA---FWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFL-EPSVILLILAANAAVGVI 106 (992)
Q Consensus 31 ~r~~~~G~N~i~~~~~~~---~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~-~~~~ii~~i~~~~~~~~~ 106 (992)
.++++|.+|++...|++. ++..+++||+-.++.++++.++-++++.+..+. +..|+ +.+.++++.++..+++.+
T Consensus 74 ~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~--l~ty~~pl~fvl~itl~keavdd~ 151 (1051)
T KOG0210|consen 74 YRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGY--LSTYWGPLGFVLTITLIKEAVDDL 151 (1051)
T ss_pred cccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecc--hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 566778899998877654 677889999999999999998888877654322 33333 344444555566666666
Q ss_pred HHHHHHHHHHHHHhcCCCceEEE-ECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeec--CCceEEecccccCCCcc
Q 001949 107 TETNAEKALEELRAYQADIATVL-RNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML--SNQLRVDQAILTGESCS 183 (992)
Q Consensus 107 ~~~k~~~~~~~l~~~~~~~~~V~-R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~--~g~~~Vdes~LtGEs~p 183 (992)
.+++.++. .+....+++ |+|...+ ++++|++||+|+++++++||||++++.++ +|.|++.+..|+||++-
T Consensus 152 ~r~~rd~~------~Nse~y~~ltr~~~~~~-~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGETDW 224 (1051)
T KOG0210|consen 152 KRRRRDRE------LNSEKYTKLTRDGTRRE-PSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGETDW 224 (1051)
T ss_pred HHHHhhhh------hhhhhheeeccCCcccc-cccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcccc
Confidence 55555442 233344555 7775555 99999999999999999999999999765 78999999999999975
Q ss_pred cccccccccc----------------------------------cccccCCCCceeeecceEeeceEEEEEEEecccccc
Q 001949 184 VEKELDSIIA----------------------------------TNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAM 229 (992)
Q Consensus 184 v~K~~~~~~~----------------------------------~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~ 229 (992)
+.|-+.+..+ ++.+..+-+|.++++|.+.+|.++|+|++||.+|+.
T Consensus 225 KLrl~vp~tQ~l~~~~el~~i~v~Ae~P~kdIh~F~Gt~~~~d~~~~~~LsventLWanTVvAs~t~~gvVvYTG~dtRs 304 (1051)
T KOG0210|consen 225 KLRLPVPRTQHLTEDSELMEISVYAEKPQKDIHSFVGTFTITDSDKPESLSVENTLWANTVVASGTAIGVVVYTGRDTRS 304 (1051)
T ss_pred eeeccchhhccCCcccchheEEEeccCcchhhHhhEEEEEEecCCCCCcccccceeeeeeeEecCcEEEEEEEecccHHH
Confidence 5553321111 011234557999999999999999999999999943
Q ss_pred hhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHH
Q 001949 230 GSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPA 309 (992)
Q Consensus 230 g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~ 309 (992)
..+...++.+...++.++|.+.+++...++++++++...... .. .+...+..++.++...+|.+|-+
T Consensus 305 ---vMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~--~~--------~wyi~~~RfllLFS~IIPISLRv 371 (1051)
T KOG0210|consen 305 ---VMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF--GS--------DWYIYIIRFLLLFSSIIPISLRV 371 (1051)
T ss_pred ---HhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC--CC--------chHHHHHHHHHHHhhhceeEEEE
Confidence 445556667777889999999998888777777766544321 11 23345677888999999999999
Q ss_pred HHHHHHHHhhhhhhhc----ccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcc-c
Q 001949 310 VVTTCLALGTKRMARL----NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTT-Y 384 (992)
Q Consensus 310 ~~~~~~~~~~~~l~~~----~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~-~ 384 (992)
.+.++.....+.+.++ |.++|++..-|+||+++++.+|||||||+|+|.+++++.+.-.+.....++.+..-.. +
T Consensus 372 nlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~~~i~s~~ 451 (1051)
T KOG0210|consen 372 NLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVSQHIQSLY 451 (1051)
T ss_pred ehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHHHHHHHhh
Confidence 9999999999888764 5789999999999999999999999999999999999986433221111111100000 1
Q ss_pred CC--CCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhh
Q 001949 385 AP--EGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALN 462 (992)
Q Consensus 385 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~ 462 (992)
.+ .+......... ......+.++..++++||+..+..+.++...|++.+|+|+|++++.+..|+.+..|+...+.
T Consensus 452 ~~~~~~~~~~~~~~k---~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~Rd~~~it 528 (1051)
T KOG0210|consen 452 TPGRNKGKGALSRVK---KDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKWTETVGLKLAKRDRHAIT 528 (1051)
T ss_pred CCCcccccccchhhc---CcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEeeeecceEEeecccceEE
Confidence 11 00000000001 11345578888999999999988876667789999999999999999999999887766555
Q ss_pred hhcccccccccCccccccccEEEeecCCCCCceEEEEEeeC--CeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHH
Q 001949 463 MLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHK--QMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIR 540 (992)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~--~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~ 540 (992)
...+. ....+|+++..|||+|+.|||.+||+++ ++...|.|||+..|...- +..
T Consensus 529 L~~~~--------~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iV----------------q~N 584 (1051)
T KOG0210|consen 529 LRVPL--------DDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIV----------------QYN 584 (1051)
T ss_pred EecCC--------CcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccc----------------ccc
Confidence 44332 3456899999999999999999999997 889999999998775432 223
Q ss_pred HHHHHHHHHHhhccchhhhhhhcccCCccccc-----------------------CccccCCCcEEEEEecccCCCcHHH
Q 001949 541 AELESRLNSLAGKEALRCLALALKQMPINRQT-----------------------LSYDDEKDLTFIGLVGMLDPPREEV 597 (992)
Q Consensus 541 ~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~-----------------------~~~~~e~~l~~lG~i~~~d~~~~~~ 597 (992)
+++++...++|. +|+|++++|+|.++.++.+ .+..+|+|+.++|++|+||++++++
T Consensus 585 dWleEE~gNMAR-EGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dV 663 (1051)
T KOG0210|consen 585 DWLEEECGNMAR-EGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDV 663 (1051)
T ss_pred hhhhhhhhhhhh-hcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhh
Confidence 567888899998 9999999999999854310 0111589999999999999999999
Q ss_pred HHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc------------------------ccccccchhhhcCC-
Q 001949 598 KNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF------------------------VGRSYTASEFEELP- 652 (992)
Q Consensus 598 ~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~------------------------~~~~~~~~~~~~~~- 652 (992)
+.+++.||+||||+||+|||+.+||..+|+..++....... ..++++|+.++-..
T Consensus 664 k~tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl~ 743 (1051)
T KOG0210|consen 664 KPTLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCLK 743 (1051)
T ss_pred HhHHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHHH
Confidence 99999999999999999999999999999999998765432 13566666554322
Q ss_pred --HHHHHHHhc--ceeEEeecChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeEEe-cCCcHHHHhccCeeec
Q 001949 653 --AMQQTVALQ--HMALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIAM-GSGTAVAKSASDMVLA 726 (992)
Q Consensus 653 --~~~~~~~~~--~~~v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa~-g~~~~~~~~~ad~vl~ 726 (992)
++|..++.. ..+|+|||+|.||+++++.+|++ |+.|+++|||.||+.|+|+||+||++ |+++.+|.-+||+.+.
T Consensus 744 yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAADfSIt 823 (1051)
T KOG0210|consen 744 YYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAADFSIT 823 (1051)
T ss_pred HHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhccccHH
Confidence 234434333 56799999999999999999986 89999999999999999999999996 6999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH---HHHHHHHHhhhhhhhhccCCCC
Q 001949 727 DDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQ---LLWVNLVTDGLPATAIGFNKQD 803 (992)
Q Consensus 727 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~---~l~~~~~~~~~p~~~l~~~~~~ 803 (992)
++..-+-+.++ |||+.|.|..+.-+|.+-..+....++.++.....+.|....| +.-+..+++++|.+++.++..-
T Consensus 824 qF~Hv~rLLl~-HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~d~Dv 902 (1051)
T KOG0210|consen 824 QFSHVSRLLLW-HGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVLDRDV 902 (1051)
T ss_pred HHHHHHHHhhc-cccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeeecccc
Confidence 99988888888 9999999999999999999998888887777665666666665 4556889999999999887643
Q ss_pred -ccccccCCCC----CCCCccchHHHHHHHHHHHH----HHHHHHhcCCCCCccccccccccCCCCCCCCCCCccCCccc
Q 001949 804 -SDVMKAKPRK----VSEAVVTGWLFFRYLVIGGF----IWWYVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHP 874 (992)
Q Consensus 804 -~~~~~~~P~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (992)
+.....+|.. .+...++-+.|+.|.+++++ +.++.+. ++. .++ ...
T Consensus 903 ~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~----------l~~------------~ef---~~i 957 (1051)
T KOG0210|consen 903 SESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALL----------LFD------------TEF---IHI 957 (1051)
T ss_pred cHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHH----------Hhh------------hhh---eEe
Confidence 4555566732 34455555555555555522 1221111 000 000 122
Q ss_pred hhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHHhccccccceecccCC-hhhHHHHHHHHH
Q 001949 875 STVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIILTMFLHILILYVPPLSVLFSVTPLS-WADWTAVFYLSF 953 (992)
Q Consensus 875 ~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~~~p~~~~~f~~~~l~-~~~w~~~~~~~~ 953 (992)
.++.|+++++..+.-.. +....| +|.++.+=+.++++ .+++.|+++++|....+. +.++..+.++.+
T Consensus 958 vaisFtaLi~tELiMVa---------Ltv~tw-~~~m~vae~lsL~~--Yivsl~~l~~yfd~~f~~~~~Fl~k~t~I~~ 1025 (1051)
T KOG0210|consen 958 VAISFTALILTELIMVA---------LTVRTW-HWLMVVAELLSLAL--YIVSLAFLHEYFDRYFILTYVFLWKVTVITL 1025 (1051)
T ss_pred eeeeeHHHHHHHHHHHh---------hhhhhh-hHHHHHHHHHHHHH--HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 57778888877665332 122333 56777666666654 446788888888877754 445455666777
Q ss_pred HHHHHHHHHHHHHhhccchhhhhhcc
Q 001949 954 PVIIIDEVLKFFSRKSSGMRFKFWFR 979 (992)
Q Consensus 954 ~~l~~~ei~K~~~r~~~p~~~~~~~~ 979 (992)
+.++|..+.|+++|++-|++|.++++
T Consensus 1026 vS~Lpl~~~K~lrrk~sPpSYaKl~~ 1051 (1051)
T KOG0210|consen 1026 VSCLPLYFIKALRRKLSPPSYAKLQS 1051 (1051)
T ss_pred HHHHHHHHHHHHHhhcCCcchhhccC
Confidence 78889999999999999999998763
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.1e-88 Score=788.31 Aligned_cols=553 Identities=23% Similarity=0.326 Sum_probs=451.1
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhcC---CCCcccchhhHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHhcCCC-ce
Q 001949 55 KQFDDLLVKILIAAAVISFFLALING---ETGLTAFLEPSVILLILAANAAVGVIT----ETNAEKALEELRAYQAD-IA 126 (992)
Q Consensus 55 ~~f~~~~~~~l~~~~iis~~~~~~~~---~~~~~~~~~~~~ii~~i~~~~~~~~~~----~~k~~~~~~~l~~~~~~-~~ 126 (992)
.+|++|+.++++++++++++++.+.. +..+ ..++++.++++++++.+++.++ |+|+++.+++|+++.++ ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESV-SRLYVFSIFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 36789999999999999998877632 1111 1245566666666666666666 78999999999999886 67
Q ss_pred E-EEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCcee
Q 001949 127 T-VLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (992)
Q Consensus 127 ~-V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l 205 (992)
+ |.|||++++|++++|+|||+|.+++||+|||||++++ |...||||+|||||.|+.|+++. ++ +.+
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~---------d~-~~V 173 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVIK---GLATVDESAITGESAPVIKESGG---------DF-DNV 173 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEEE---cceEEecchhcCCCCceeccCCC---------cc-Cee
Confidence 6 6799999999999999999999999999999999995 67799999999999999998741 22 339
Q ss_pred eecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccch
Q 001949 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (992)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (992)
|+||.+.+|+++++|+++|.+|.+||+.+++...+.+++|++..+..+...++. +++++++++.....+.
T Consensus 174 ~aGT~v~~G~~~i~Vta~g~~T~lgki~~lve~a~~~ktp~e~~l~~l~~~l~i--i~l~~~~~~~~~~~~~-------- 243 (673)
T PRK14010 174 IGGTSVASDWLEVEITSEPGHSFLDKMIGLVEGATRKKTPNEIALFTLLMTLTI--IFLVVILTMYPLAKFL-------- 243 (673)
T ss_pred ecCceeecceEEEEEEEecccCHHHHHHHHHhhccccCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhhc--------
Confidence 999999999999999999999999999999999988999999776655433332 2222222222111110
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEe
Q 001949 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (992)
Q Consensus 286 ~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 365 (992)
.....+.+.++++++++||+|+..++++...+++||+|+|+++|+.+++|++|++|++|||||||||+|++.+.++...
T Consensus 244 -~~~~~~~~~val~V~~IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~ 322 (673)
T PRK14010 244 -NFNLSIAMLIALAVCLIPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPV 322 (673)
T ss_pred -cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeC
Confidence 1122455677888889999999999999999999999999999999999999999999999999999988877765432
Q ss_pred ccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHH
Q 001949 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (992)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~ 445 (992)
++ ....+++..+.+|+... .||.+.|++++
T Consensus 323 ~~-------------------------------------~~~~~ll~~a~~~~~~s-------------~~P~~~AIv~~ 352 (673)
T PRK14010 323 KS-------------------------------------SSFERLVKAAYESSIAD-------------DTPEGRSIVKL 352 (673)
T ss_pred CC-------------------------------------ccHHHHHHHHHHhcCCC-------------CChHHHHHHHH
Confidence 10 01123444455665321 38999999999
Q ss_pred HHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhcc
Q 001949 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (992)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~ 525 (992)
+++.++... ......+||++++|+|++.++ ++ .+.||+++.+++.|+.
T Consensus 353 a~~~~~~~~--------------------------~~~~~~~pF~~~~k~~gv~~~--g~--~i~kGa~~~il~~~~~-- 400 (673)
T PRK14010 353 AYKQHIDLP--------------------------QEVGEYIPFTAETRMSGVKFT--TR--EVYKGAPNSMVKRVKE-- 400 (673)
T ss_pred HHHcCCCch--------------------------hhhcceeccccccceeEEEEC--CE--EEEECCHHHHHHHhhh--
Confidence 987664321 001123799999999998753 33 4559999999999975
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHH
Q 001949 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (992)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (992)
+|...+. .+.+..++++. +|+|+++++ .|++++|+++++|++||+++++|++||
T Consensus 401 ---~g~~~~~------~~~~~~~~~a~-~G~~~l~v~----------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr 454 (673)
T PRK14010 401 ---AGGHIPV------DLDALVKGVSK-KGGTPLVVL----------------EDNEILGVIYLKDVIKDGLVERFRELR 454 (673)
T ss_pred ---cCCCCch------HHHHHHHHHHh-CCCeEEEEE----------------ECCEEEEEEEeecCCcHHHHHHHHHHH
Confidence 1221121 24556677887 999998765 377999999999999999999999999
Q ss_pred hCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcC
Q 001949 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (992)
Q Consensus 606 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~ 685 (992)
++||+++|+|||++.||.++|+++|+.. +++|++|+||.++|+.+|++|
T Consensus 455 ~~GI~vvMiTGDn~~TA~aIA~elGI~~-------------------------------v~A~~~PedK~~iV~~lQ~~G 503 (673)
T PRK14010 455 EMGIETVMCTGDNELTAATIAKEAGVDR-------------------------------FVAECKPEDKINVIREEQAKG 503 (673)
T ss_pred HCCCeEEEECCCCHHHHHHHHHHcCCce-------------------------------EEcCCCHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999975 899999999999999999999
Q ss_pred CEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (992)
Q Consensus 686 ~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (992)
+.|+|+|||.||+|||++||||||||+|++.+|++||+|++++++..+++++++||.+|.|+++++.|.++.|+..++..
T Consensus 504 ~~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i 583 (673)
T PRK14010 504 HIVAMTGDGTNDAPALAEANVGLAMNSGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAI 583 (673)
T ss_pred CEEEEECCChhhHHHHHhCCEEEEeCCCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998887
Q ss_pred HHHHHh
Q 001949 766 FVAAVL 771 (992)
Q Consensus 766 ~~~~~~ 771 (992)
+...+.
T Consensus 584 ~~a~~~ 589 (673)
T PRK14010 584 LPAMFM 589 (673)
T ss_pred HHHHHH
Confidence 775554
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.8e-86 Score=769.31 Aligned_cols=554 Identities=24% Similarity=0.303 Sum_probs=460.1
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhcCC-----CCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ceEE
Q 001949 55 KQFDDLLVKILIAAAVISFFLALINGE-----TGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQAD-IATV 128 (992)
Q Consensus 55 ~~f~~~~~~~l~~~~iis~~~~~~~~~-----~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~-~~~V 128 (992)
.||++|+.++++++++++++++++... .....|...+++++.+++..+++.++|+|+++.+++|++..++ +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 478899999999999999998765311 1123455556666777788888899999999999999998886 6999
Q ss_pred EECCE-EEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCceeee
Q 001949 129 LRNGC-FSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFS 207 (992)
Q Consensus 129 ~R~g~-~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~ 207 (992)
+|||+ +++|++++|+|||+|.+++||+|||||++++ |.+.||||+|||||.|+.|++++. .+.+|+
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vie---G~a~VDESaLTGES~PV~K~~G~~----------~~~V~a 175 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVIE---GVASVDESAITGESAPVIRESGGD----------FSSVTG 175 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEEE---ccEEEEcccccCCCCceEeCCCCc----------cCeEEe
Confidence 99988 9999999999999999999999999999995 678999999999999999987421 233999
Q ss_pred cceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHH
Q 001949 208 GTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRG 287 (992)
Q Consensus 208 Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (992)
||.+.+|+++++|+++|.+|.+|++.+++.+.+.+++|++..++.+...+..+.+++++.++.+.. +...
T Consensus 176 GT~v~~G~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~~~~--~~g~-------- 245 (679)
T PRK01122 176 GTRVLSDWIVIRITANPGESFLDRMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPPFAA--YSGG-------- 245 (679)
T ss_pred ceEEEeeeEEEEEEEecccCHHHHHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHH--HhCc--------
Confidence 999999999999999999999999999999998999999998888776665544444333333221 1110
Q ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEecc
Q 001949 288 AIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHS 367 (992)
Q Consensus 288 ~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~ 367 (992)
...+..++++++++|||+|+...+.+...++.||.++|+++|+.+++|+||++|++|||||||||+|+|.+++++..++
T Consensus 246 -~~~l~~~iallV~aiP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~ 324 (679)
T PRK01122 246 -ALSITVLVALLVCLIPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG 324 (679)
T ss_pred -hHHHHHHHHHHHHcccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC
Confidence 1146678899999999999999999999999999999999999999999999999999999999999999998764321
Q ss_pred ccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHH
Q 001949 368 VQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAE 447 (992)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~ 447 (992)
. .. .+++.++.+|+... .||...|++++++
T Consensus 325 ~----------------------------------~~---~~ll~~a~~~s~~s-------------~hP~~~AIv~~a~ 354 (679)
T PRK01122 325 V----------------------------------TE---EELADAAQLSSLAD-------------ETPEGRSIVVLAK 354 (679)
T ss_pred C----------------------------------CH---HHHHHHHHHhcCCC-------------CCchHHHHHHHHH
Confidence 0 11 23444455555321 3688899999987
Q ss_pred H-cCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccc
Q 001949 448 K-VGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILC 526 (992)
Q Consensus 448 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~ 526 (992)
+ .+.... +..++....+||++.+++|++.++ + ..+.||++|.+++.|+.
T Consensus 355 ~~~~~~~~-----------------------~~~~~~~~~~pF~s~~~~~gv~~~--g--~~~~kGa~e~il~~~~~--- 404 (679)
T PRK01122 355 QRFNLRER-----------------------DLQSLHATFVPFSAQTRMSGVDLD--G--REIRKGAVDAIRRYVES--- 404 (679)
T ss_pred hhcCCCch-----------------------hhccccceeEeecCcCceEEEEEC--C--EEEEECCHHHHHHHHHh---
Confidence 6 332110 112445677899999998887653 3 57899999999999964
Q ss_pred cCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHh
Q 001949 527 NDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMT 606 (992)
Q Consensus 527 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~ 606 (992)
+|... .+++.+..++++. +|.|++++|+ |++++|+++++|++||+++++|++||+
T Consensus 405 --~g~~~------~~~~~~~~~~~a~-~G~~~l~va~----------------~~~~lG~i~l~D~~R~~~~eai~~Lr~ 459 (679)
T PRK01122 405 --NGGHF------PAELDAAVDEVAR-KGGTPLVVAE----------------DNRVLGVIYLKDIVKPGIKERFAELRK 459 (679)
T ss_pred --cCCcC------hHHHHHHHHHHHh-CCCcEEEEEE----------------CCeEEEEEEEeccCchhHHHHHHHHHH
Confidence 22211 2456677788887 9999999983 678999999999999999999999999
Q ss_pred CCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCC
Q 001949 607 AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNE 686 (992)
Q Consensus 607 ~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~ 686 (992)
+||+++|+|||++.||.++|+++|+++ +++|++|+||.++|+.+|++|+
T Consensus 460 ~GI~vvMiTGDn~~TA~aIA~elGId~-------------------------------v~A~~~PedK~~iV~~lQ~~G~ 508 (679)
T PRK01122 460 MGIKTVMITGDNPLTAAAIAAEAGVDD-------------------------------FLAEATPEDKLALIRQEQAEGR 508 (679)
T ss_pred CCCeEEEECCCCHHHHHHHHHHcCCcE-------------------------------EEccCCHHHHHHHHHHHHHcCC
Confidence 999999999999999999999999964 8999999999999999999999
Q ss_pred EEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 687 VVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIF 766 (992)
Q Consensus 687 ~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~ 766 (992)
.|+|+|||.||+|||++||||||||+|++.+|++||+|++|+|+..+++++++||+.+-+--....|++...++-.+.++
T Consensus 509 ~VaMtGDGvNDAPALa~ADVGIAMgsGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~ 588 (679)
T PRK01122 509 LVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAII 588 (679)
T ss_pred eEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998777888999886666554444
Q ss_pred HH
Q 001949 767 VA 768 (992)
Q Consensus 767 ~~ 768 (992)
-.
T Consensus 589 p~ 590 (679)
T PRK01122 589 PA 590 (679)
T ss_pred HH
Confidence 33
No 22
>KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-85 Score=700.32 Aligned_cols=675 Identities=30% Similarity=0.435 Sum_probs=535.6
Q ss_pred ccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCc
Q 001949 5 YARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGL 84 (992)
Q Consensus 5 ~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~ 84 (992)
-..+.|++.+.|.... .|||++|+++|+++||+|++.+++.+ .+..|+.-|++|+.++.-.++++...+ ..+...+
T Consensus 19 ~~~p~eeVfeeL~~t~-~GLt~~E~~eRlk~fG~NkleEkken-~~lKFl~Fm~~PlswVMEaAAimA~~L--ang~~~~ 94 (942)
T KOG0205|consen 19 EAIPIEEVFEELLCTR-EGLTSDEVEERLKIFGPNKLEEKKES-KFLKFLGFMWNPLSWVMEAAAIMAIGL--ANGGGRP 94 (942)
T ss_pred ccCchhhhHHHHhcCC-CCCchHHHHHHHHhhCchhhhhhhhh-HHHHHHHHHhchHHHHHHHHHHHHHHH--hcCCCCC
Confidence 3578999999998774 49999999999999999999977654 556677789999999999998887654 4444445
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 85 TAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 85 ~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
..|.+...|..++++|+.+++++|+++.....+|++-...++.|+|||+|.++.+++||||||+.++.||+||||+|+++
T Consensus 95 ~DW~DF~gI~~LLliNsti~FveE~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~ 174 (942)
T KOG0205|consen 95 PDWQDFVGICCLLLINSTISFIEENNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLE 174 (942)
T ss_pred cchhhhhhhheeeeecceeeeeeccccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceec
Confidence 68999999999999999999999999999999999988999999999999999999999999999999999999999997
Q ss_pred ecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001949 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (992)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (992)
.+.+.||+|.|||||.|+.|.+ ++-+|+||.|++|++.++|++||.+|..|+-+.++.. ..+..
T Consensus 175 --gD~LkiDQSAlTGESLpvtKh~-------------gd~vfSgSTcKqGE~eaVViATg~~TF~GkAA~LVds-t~~~G 238 (942)
T KOG0205|consen 175 --GDPLKIDQSALTGESLPVTKHP-------------GDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDS-TNQVG 238 (942)
T ss_pred --CCccccchhhhcCCccccccCC-------------CCceecccccccceEEEEEEEeccceeehhhHHhhcC-CCCcc
Confidence 5689999999999999999998 5568999999999999999999999999999888877 66778
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 001949 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (992)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (992)
.+++-++.+.++.+..+++-.++.+.+.+..... ..+.. ....+.+++..+|.++|..+++.+++++.||++
T Consensus 239 HFqkVLt~IGn~ci~si~~g~lie~~vmy~~q~R-----~~r~~---i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaq 310 (942)
T KOG0205|consen 239 HFQKVLTGIGNFCICSIALGMLIEITVMYPIQHR-----LYRDG---IDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQ 310 (942)
T ss_pred cHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhhhh-----hhhhh---hhheheeeecccccccceeeeehhhHHHHHHHh
Confidence 8999999988776554332222222221111100 01111 112233445569999999999999999999999
Q ss_pred cccccccccccccccceEEEEecCCCccccCceEEEE--EEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCC
Q 001949 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAK--ICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPA 402 (992)
Q Consensus 325 ~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (992)
+|.+.|+..++|.++.+|++|+|||||||.|++++.+ +... .+|.
T Consensus 311 qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~-------------v~gv-------------------- 357 (942)
T KOG0205|consen 311 QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVF-------------VKGV-------------------- 357 (942)
T ss_pred cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceee-------------ecCC--------------------
Confidence 9999999999999999999999999999999999977 2111 1111
Q ss_pred CchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCcccccccc
Q 001949 403 QLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFK 482 (992)
Q Consensus 403 ~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 482 (992)
+...+ -+..|.+ +..+ ..|..|.|++...+. + +.....|+
T Consensus 358 ~~D~~-~L~A~rA----sr~e----------n~DAID~A~v~~L~d---P----------------------Keara~ik 397 (942)
T KOG0205|consen 358 DKDDV-LLTAARA----SRKE----------NQDAIDAAIVGMLAD---P----------------------KEARAGIK 397 (942)
T ss_pred ChHHH-HHHHHHH----hhhc----------ChhhHHHHHHHhhcC---H----------------------HHHhhCce
Confidence 11111 1222221 1111 136778888765431 0 11245788
Q ss_pred EEEeecCCCCCceEEEEEee-CCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhh
Q 001949 483 KVSILEFSRDRKMMSVLCSH-KQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLAL 561 (992)
Q Consensus 483 ~l~~~~F~s~~k~msviv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~ 561 (992)
.++.+||++-.||.+..+.+ +|+-.-.+|||||.|++.|+. +.+.++.+.+.+++||+ +|+|.+++
T Consensus 398 evhF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~------------~~~i~~~vh~~id~~Ae-RGlRSLgV 464 (942)
T KOG0205|consen 398 EVHFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNE------------DHDIPERVHSIIDKFAE-RGLRSLAV 464 (942)
T ss_pred EEeeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhc------------cCcchHHHHHHHHHHHH-hcchhhhh
Confidence 99999999999999988876 466778899999999999964 34556778889999998 99999999
Q ss_pred hcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccc
Q 001949 562 ALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGR 641 (992)
Q Consensus 562 a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~ 641 (992)
|++..++..... -.....|+|+.-+-||+|.++.++|.+....|++|.|+|||...-++.-++++|+-.+.... .
T Consensus 465 Arq~v~e~~~~~---~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgmgtnmyps--s 539 (942)
T KOG0205|consen 465 ARQEVPEKTKES---PGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPS--S 539 (942)
T ss_pred hhhccccccccC---CCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhccccCcCCc--h
Confidence 999987653322 23467899999999999999999999999999999999999999999999999986643221 1
Q ss_pred cccchh-hhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhc
Q 001949 642 SYTASE-FEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSA 720 (992)
Q Consensus 642 ~~~~~~-~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ 720 (992)
.+-|.+ -+++......+.+....=|+.+.|+||.++|+.||++++.|+|+|||+||+|++|.||+|||+..+++.++.+
T Consensus 540 ~llG~~~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiava~atdaar~a 619 (942)
T KOG0205|consen 540 ALLGLGKDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAVADATDAARSA 619 (942)
T ss_pred hhccCCCCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceeeccchhhhccc
Confidence 111111 1223333444455556678999999999999999999999999999999999999999999999999999999
Q ss_pred cCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccC
Q 001949 721 SDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFN 800 (992)
Q Consensus 721 ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~ 800 (992)
+|+|+....++.+..++..+|.+|.|++.+..|.++..+-.++..++.. +-+..-++|...+++-++.| -+.++.+.+
T Consensus 620 sdiVltepglSviI~avltSraIfqrmknytiyavsitiriv~gfml~a-lIw~~df~pfmvliiailnd-~t~mtis~d 697 (942)
T KOG0205|consen 620 SDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIA-LIWEFDFSPFMVLIIAILND-GTIMTISKD 697 (942)
T ss_pred ccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHHHHHHHHH-HHHHhcCCHHHHHHHHHhcC-CceEEEEcc
Confidence 9999999999999999999999999999999999887766543322222 22334577888888877777 344455444
No 23
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=3.8e-82 Score=734.49 Aligned_cols=557 Identities=24% Similarity=0.345 Sum_probs=458.1
Q ss_pred HHhhhhHHHHHHHHHHHHHHHHHhcC---CCCc-ccchhh---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-e
Q 001949 55 KQFDDLLVKILIAAAVISFFLALING---ETGL-TAFLEP---SVILLILAANAAVGVITETNAEKALEELRAYQADI-A 126 (992)
Q Consensus 55 ~~f~~~~~~~l~~~~iis~~~~~~~~---~~~~-~~~~~~---~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~-~ 126 (992)
.||++|..+++++++++++++++.+. ..+. ..|++. +++++.+++..+++.++++|+++.+++|++..++. +
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 47899999999999999999876521 1011 124443 44555577888889999999999999999988774 8
Q ss_pred EEEE-CCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCcee
Q 001949 127 TVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL 205 (992)
Q Consensus 127 ~V~R-~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l 205 (992)
+|+| ||++++|++++|+|||+|.+++||+|||||++++ |.+.||||+|||||.|+.|++++. .+.+
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vie---G~~~VDESaLTGES~PV~K~~g~~----------~~~V 174 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVIE---GVASVDESAITGESAPVIKESGGD----------FASV 174 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEEE---ccEEEEcccccCCCCceeecCCCC----------ccee
Confidence 8885 8999999999999999999999999999999995 689999999999999999987531 1138
Q ss_pred eecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccch
Q 001949 206 FSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFL 285 (992)
Q Consensus 206 ~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (992)
|+||.+.+|++.++|+++|.+|.+|++.+++...+.+++|++..++.+...+..+.+++++.++.... +..
T Consensus 175 ~aGT~v~~G~~~i~Vt~~g~~S~lgri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~~~~~~~~~--~~~------- 245 (675)
T TIGR01497 175 TGGTRILSDWLVVECTANPGETFLDRMIALVEGAQRRKTPNEIALTILLIALTLVFLLVTATLWPFAA--YGG------- 245 (675)
T ss_pred ecCcEEEeeEEEEEEEEecccCHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hcC-------
Confidence 99999999999999999999999999999999988889999988888776655444433333332211 110
Q ss_pred HHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEe
Q 001949 286 RGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVV 365 (992)
Q Consensus 286 ~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 365 (992)
....+..++++++++|||+|+...+.....++.||+++|+++|+.+++|++|++|++|||||||||+|+|++.+++..
T Consensus 246 --~~~~~~~lvallV~aiP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~ 323 (675)
T TIGR01497 246 --NAISVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPA 323 (675)
T ss_pred --hhHHHHHHHHHHHHhCchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEec
Confidence 012355678899999999888777777778999999999999999999999999999999999999999999988643
Q ss_pred ccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHH
Q 001949 366 HSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVL 445 (992)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~ 445 (992)
++. . ..+++..+.+|+.. ..||.+.|++++
T Consensus 324 ~~~----------------------------------~---~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~ 353 (675)
T TIGR01497 324 QGV----------------------------------D---EKTLADAAQLASLA-------------DDTPEGKSIVIL 353 (675)
T ss_pred CCC----------------------------------c---HHHHHHHHHHhcCC-------------CCCcHHHHHHHH
Confidence 110 1 12344444555432 147999999999
Q ss_pred HHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhcc
Q 001949 446 AEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNIL 525 (992)
Q Consensus 446 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~ 525 (992)
+++.|.... ...++.....||++++++|++.+. ++ ..+.||++|.+++.|..
T Consensus 354 a~~~~~~~~-----------------------~~~~~~~~~~pf~~~~~~sg~~~~-~g--~~~~kGa~e~i~~~~~~-- 405 (675)
T TIGR01497 354 AKQLGIRED-----------------------DVQSLHATFVEFTAQTRMSGINLD-NG--RMIRKGAVDAIKRHVEA-- 405 (675)
T ss_pred HHHcCCCcc-----------------------ccccccceEEEEcCCCcEEEEEEe-CC--eEEEECCHHHHHHHHHh--
Confidence 988665321 011234567899999887776543 23 56899999999998853
Q ss_pred ccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHH
Q 001949 526 CNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCM 605 (992)
Q Consensus 526 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~ 605 (992)
+|... ...+.+.+++++. +|.|++++|+ |.+++|+++++|++||+++++|++||
T Consensus 406 ---~g~~~------~~~~~~~~~~~a~-~G~r~l~va~----------------~~~~lG~i~l~D~~Rp~a~eaI~~l~ 459 (675)
T TIGR01497 406 ---NGGHI------PTDLDQAVDQVAR-QGGTPLVVCE----------------DNRIYGVIYLKDIVKGGIKERFAQLR 459 (675)
T ss_pred ---cCCCC------cHHHHHHHHHHHh-CCCeEEEEEE----------------CCEEEEEEEecccchhHHHHHHHHHH
Confidence 22211 1346667788887 9999999984 46899999999999999999999999
Q ss_pred hCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcC
Q 001949 606 TAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQN 685 (992)
Q Consensus 606 ~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~ 685 (992)
++|++++|+|||+..+|.++|+++|+.+ +++|++|++|.++|+.+|++|
T Consensus 460 ~~Gi~v~miTGD~~~ta~~iA~~lGI~~-------------------------------v~a~~~PedK~~~v~~lq~~g 508 (675)
T TIGR01497 460 KMGIKTIMITGDNRLTAAAIAAEAGVDD-------------------------------FIAEATPEDKIALIRQEQAEG 508 (675)
T ss_pred HCCCEEEEEcCCCHHHHHHHHHHcCCCE-------------------------------EEcCCCHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999965 789999999999999999999
Q ss_pred CEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 686 EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (992)
Q Consensus 686 ~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (992)
+.|+|+|||.||+|||++||+|||||++++.++++||++++|+|+.++++++++||+++-+......|+++.++...+.+
T Consensus 509 ~~VamvGDG~NDapAL~~AdvGiAm~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~~~~~~ 588 (675)
T TIGR01497 509 KLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVAKYFAI 588 (675)
T ss_pred CeEEEECCCcchHHHHHhCCEeEEeCCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988877665
Q ss_pred HHHHH
Q 001949 766 FVAAV 770 (992)
Q Consensus 766 ~~~~~ 770 (992)
+-..|
T Consensus 589 ~~~~~ 593 (675)
T TIGR01497 589 IPAIF 593 (675)
T ss_pred HHHHH
Confidence 54444
No 24
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.2e-80 Score=678.96 Aligned_cols=838 Identities=22% Similarity=0.265 Sum_probs=574.4
Q ss_pred CCCCH-HHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHH
Q 001949 22 KGLTD-SQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAAN 100 (992)
Q Consensus 22 ~GL~~-~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~ 100 (992)
+|+.. +++..-..+||+|+...+.|+ |-.++.+.-..|++.++.++..+++.- .+|+.++.-+++++.-
T Consensus 161 ~G~~~~~~i~~a~~~~G~N~fdi~vPt-F~eLFkE~A~aPfFVFQVFcvgLWCLD---------eyWYySlFtLfMli~f 230 (1160)
T KOG0209|consen 161 TGHEEESEIKLAKHKYGKNKFDIVVPT-FSELFKEHAVAPFFVFQVFCVGLWCLD---------EYWYYSLFTLFMLIAF 230 (1160)
T ss_pred cCcchHHHHHHHHHHhcCCccccCCcc-HHHHHHHhccCceeeHhHHhHHHHHhH---------HHHHHHHHHHHHHHHH
Confidence 57763 344444556999999987754 888888888888888877777766542 3566666555555443
Q ss_pred HHHHHHHHHHHHHHHHHHHhc--CCCceEEEECCEEEEeeCCCCCCCcEEEecC---CCccCCceeeeeecCCceEEecc
Q 001949 101 AAVGVITETNAEKALEELRAY--QADIATVLRNGCFSILPAAELVPGDIVEVNV---GCKIPADMRMIEMLSNQLRVDQA 175 (992)
Q Consensus 101 ~~~~~~~~~k~~~~~~~l~~~--~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~---G~~iPaD~~ll~~~~g~~~Vdes 175 (992)
..--..|+- +.+.+++++ .+..+.|+|+++|+.+.++||.|||+|.+.. ...||||.+++ .|.|.|||+
T Consensus 231 E~tlV~Qrm---~~lse~R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL---~GsciVnEa 304 (1160)
T KOG0209|consen 231 EATLVKQRM---RTLSEFRTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL---RGSCIVNEA 304 (1160)
T ss_pred HHHHHHHHH---HHHHHHHhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE---ecceeechh
Confidence 333333443 445555554 3557899999999999999999999999987 56799999999 599999999
Q ss_pred cccCCCccccccccccccccc----ccCCCCceeeecceEee-------------ceEEEEEEEecccccchhHHHHhcc
Q 001949 176 ILTGESCSVEKELDSIIATNA----VYQDKTNILFSGTVVVA-------------GRARAVVVGVGANTAMGSIRDSMLQ 238 (992)
Q Consensus 176 ~LtGEs~pv~K~~~~~~~~~~----~~~~~~n~l~~Gt~v~~-------------g~~~~~V~~tG~~T~~g~i~~~~~~ 238 (992)
+|||||.|..|.+....+.+. ...++.+++|.||++++ |-+.+.|++||.+|..|++.|.+..
T Consensus 305 MLtGESvPl~KE~Ie~~~~d~~ld~~~d~k~hVlfGGTkivQht~p~~~slk~pDggc~a~VlrTGFeTSQGkLvRtilf 384 (1160)
T KOG0209|consen 305 MLTGESVPLMKESIELRDSDDILDIDRDDKLHVLFGGTKIVQHTPPKKASLKTPDGGCVAYVLRTGFETSQGKLVRTILF 384 (1160)
T ss_pred hhcCCCccccccccccCChhhhcccccccceEEEEcCceEEEecCCccccccCCCCCeEEEEEeccccccCCceeeeEEe
Confidence 999999999998765443322 22346789999999984 5699999999999999999999998
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHh
Q 001949 239 TEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALG 318 (992)
Q Consensus 239 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~ 318 (992)
..++.|.-.++.--|..++..++++.+..+|.-. ..++. ++-...+.-++.++...+|+.||+-++++...+
T Consensus 385 ~aervTaNn~Etf~FILFLlVFAiaAa~Yvwv~G---skd~~-----RsrYKL~LeC~LIlTSVvPpELPmELSmAVNsS 456 (1160)
T KOG0209|consen 385 SAERVTANNRETFIFILFLLVFAIAAAGYVWVEG---SKDPT-----RSRYKLFLECTLILTSVVPPELPMELSMAVNSS 456 (1160)
T ss_pred cceeeeeccHHHHHHHHHHHHHHHHhhheEEEec---ccCcc-----hhhhheeeeeeEEEeccCCCCCchhhhHHHHHH
Confidence 7777665544432222222222222222121111 11110 122233445666777889999999999999999
Q ss_pred hhhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccc
Q 001949 319 TKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQL 398 (992)
Q Consensus 319 ~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (992)
...|+|.+++|..|-++.-.|+||+.|||||||||+..|.|.++--...... ... .
T Consensus 457 L~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~~~-----------~~~-------------~ 512 (1160)
T KOG0209|consen 457 LIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSADEG-----------ALT-------------P 512 (1160)
T ss_pred HHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCCcc-----------ccc-------------c
Confidence 9999999999999999999999999999999999999999998754321100 000 0
Q ss_pred cCCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCcccc
Q 001949 399 EFPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWE 478 (992)
Q Consensus 399 ~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 478 (992)
..+...+.+..++ .||....- + + ...|||.|.|.++. .|++....+... +. +...
T Consensus 513 ~s~~p~~t~~vlA----scHsLv~l-e--~---~lVGDPlEKA~l~~---v~W~~~k~~~v~-----p~-------~~~~ 567 (1160)
T KOG0209|consen 513 ASKAPNETVLVLA----SCHSLVLL-E--D---KLVGDPLEKATLEA---VGWNLEKKNSVC-----PR-------EGNG 567 (1160)
T ss_pred hhhCCchHHHHHH----HHHHHHHh-c--C---cccCChHHHHHHHh---cCcccccCcccC-----CC-------cCCC
Confidence 0011223344444 45543221 1 1 26799999998864 455543211000 00 0011
Q ss_pred ccccEEEeecCCCCCceEEEEEeeCC-----eEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhc
Q 001949 479 IEFKKVSILEFSRDRKMMSVLCSHKQ-----MCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGK 553 (992)
Q Consensus 479 ~~~~~l~~~~F~s~~k~msviv~~~~-----~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (992)
...++.+++.|+|..|||||++...+ ++++.+|||||.|.++.+..+. .+++...+|+.
T Consensus 568 ~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP~---------------dY~~iYk~ytR- 631 (1160)
T KOG0209|consen 568 KKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVPK---------------DYDEIYKRYTR- 631 (1160)
T ss_pred cccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCch---------------hHHHHHHHHhh-
Confidence 25678899999999999999998753 6899999999999998865442 36677888998
Q ss_pred cchhhhhhhcccCCcc----cccCccc-cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH
Q 001949 554 EALRCLALALKQMPIN----RQTLSYD-DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK 628 (992)
Q Consensus 554 ~g~r~l~~a~~~l~~~----~~~~~~~-~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~ 628 (992)
+|.||+|++||+++.- ..+..++ +|.||+|.|++.|.-|+|++++++|++|++++++++|+||||+.||.++|++
T Consensus 632 ~GsRVLALg~K~l~~~~~~q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAchVak~ 711 (1160)
T KOG0209|consen 632 QGSRVLALGYKPLGDMMVSQVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACHVAKE 711 (1160)
T ss_pred ccceEEEEecccccccchhhhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchheehhe
Confidence 9999999999999832 2234444 8999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCccc-------------------------------------cccccccchhhhcCCHH-HHHHHhcceeEEeecC
Q 001949 629 IGAFDHLVD-------------------------------------FVGRSYTASEFEELPAM-QQTVALQHMALFTRVE 670 (992)
Q Consensus 629 ~gi~~~~~~-------------------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~r~~ 670 (992)
+||....-. ..+.+++|+.++.+... .+..++.++.||||+.
T Consensus 712 v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l~~~~~l~~l~~hv~VfARva 791 (1160)
T KOG0209|consen 712 VGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHLQATDQLRRLIPHVWVFARVA 791 (1160)
T ss_pred eeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHHhhhHHHHHhhhheeEEEeeC
Confidence 998754100 01345667777666543 4566777899999999
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHH--------------------------------
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK-------------------------------- 718 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~-------------------------------- 718 (992)
|.||..++..+++.|+.++|||||.||++|||+||||||+-+++...+
T Consensus 792 P~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 871 (1160)
T KOG0209|consen 792 PKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRKKKLKLEPAKQTIAANRQNSPRPPV 871 (1160)
T ss_pred hhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhhhccccCchhhHHHhhhccCCCCCC
Confidence 999999999999999999999999999999999999999743322110
Q ss_pred ---------------------------------------hccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 719 ---------------------------------------SASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNI 759 (992)
Q Consensus 719 ---------------------------------------~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni 759 (992)
-+|.+.-.-.+.+++-+.|+.||+++.+.-++++......+
T Consensus 872 p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRctLVtTlQMfKILALN~L 951 (1160)
T KOG0209|consen 872 PPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRCTLVTTLQMFKILALNCL 951 (1160)
T ss_pred CCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 02222223335788999999999999999999987766555
Q ss_pred HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHH---HHHHHH
Q 001949 760 GEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVI---GGFIWW 836 (992)
Q Consensus 760 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~---~~~~~~ 836 (992)
+....+-+..+-|. -+++.|....-+++. .--++++..+|-+.+-+++|. .++++...+.+.+.. .+..++
T Consensus 952 isAYslSvlyldGV--KfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y~i~svl~QFaVH~~tLv 1025 (1160)
T KOG0209|consen 952 ISAYSLSVLYLDGV--KFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVYIILSVLLQFAVHIATLV 1025 (1160)
T ss_pred HHHHHHHHhhhcCc--eecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHHHHHHHHHHHHHHHHHhh
Confidence 55444434333444 377777766665543 233456677777888888774 356665544443221 111122
Q ss_pred HHHhcCCCCCccccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccccCCCcchhhHHHHH
Q 001949 837 YVYSNEGPKLPYSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASII 916 (992)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~i~ 916 (992)
|+..... .. .-..+.. +... -|......|.+|..-...|+.+.... ..+.+|+..+..|+.++++++
T Consensus 1026 Yi~~~a~------~~-~p~~~~v---dl~~-~F~PsllNt~vyiisl~~QvsTFAVN--Y~G~PF~Esl~eNK~l~y~ll 1092 (1160)
T KOG0209|consen 1026 YITGEAY------KL-EPPEEKV---DLEE-KFSPSLLNTTVYIISLAQQVSTFAVN--YQGRPFRESLRENKGLLYGLL 1092 (1160)
T ss_pred hhHHHHH------hc-CCccccc---Chhc-ccChhhhhhHHHHHHHHHHHHHhhhh--ccCcchhhhhhhccchHHHHH
Confidence 2221000 00 0000000 0001 12222223444444445566655332 357788888899999999998
Q ss_pred HHHHHHHHHH--hccccccceecccCChhhHHHHHHH----HHHHHHHHHHHHHHHh
Q 001949 917 LTMFLHILIL--YVPPLSVLFSVTPLSWADWTAVFYL----SFPVIIIDEVLKFFSR 967 (992)
Q Consensus 917 ~~~~l~~~~~--~~p~~~~~f~~~~l~~~~w~~~~~~----~~~~l~~~ei~K~~~r 967 (992)
++..+.+.+. +.|-++..|.+.+++-.+=..++.. .++|++++.+.||+-+
T Consensus 1093 ~~~~~~~~l~tg~~peLn~~~~lV~mp~~fk~~ll~~l~lD~v~c~~~er~~~f~f~ 1149 (1160)
T KOG0209|consen 1093 GSAGVIIALATGSSPELNEKFELVDMPQDFKIKLLAVLVLDFVLCYLVERVLKFFFG 1149 (1160)
T ss_pred HHHHHHHHHHhccChhHHhheeeecccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 8887666554 3566888899999885544333333 4455666666665533
No 25
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-75 Score=681.34 Aligned_cols=505 Identities=28% Similarity=0.383 Sum_probs=427.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEE-CCEEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLR-NGCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R-~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
+|.++.++++++++..+++.+...|+++++++|.++.|+++++++ ||++++|+.++|+|||+|.++|||+||+||+|+
T Consensus 173 yf~~aa~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~- 251 (713)
T COG2217 173 YFEEAAMLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV- 251 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-
Confidence 446778888999999999999999999999999999999998776 566999999999999999999999999999999
Q ss_pred ecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001949 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (992)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (992)
+|...||||+|||||.|+.|.+ ++.+++||.+.+|.....|+++|.+|.+++|.+++++++.+++
T Consensus 252 --~G~s~vDeS~iTGEs~PV~k~~-------------Gd~V~aGtiN~~G~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka 316 (713)
T COG2217 252 --SGSSSVDESMLTGESLPVEKKP-------------GDEVFAGTVNLDGSLTIRVTRVGADTTLARIIRLVEEAQSSKA 316 (713)
T ss_pred --eCcEEeecchhhCCCCCEecCC-------------CCEEeeeEEECCccEEEEEEecCccCHHHHHHHHHHHHhhCCc
Confidence 5888999999999999999998 5679999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 001949 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (992)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (992)
|.|+..|+++.++++.+++++++.+++|...... .+...+..++++++++|||+|.+++|++...+..+.++
T Consensus 317 ~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~~--------~~~~a~~~a~avLVIaCPCALgLAtP~ai~~g~g~aA~ 388 (713)
T COG2217 317 PIQRLADRVASYFVPVVLVIAALTFALWPLFGGG--------DWETALYRALAVLVIACPCALGLATPTAILVGIGRAAR 388 (713)
T ss_pred hHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcCC--------cHHHHHHHHHhheeeeCccHHHhHHHHHHHHHHHHHHh
Confidence 9999999999999998888888887766544321 12346778999999999999999999999999999999
Q ss_pred cccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCc
Q 001949 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (992)
Q Consensus 325 ~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (992)
+|+++|+...+|.++++|+++||||||||+|+|+|.++...++ +.
T Consensus 389 ~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------------------------------~e 433 (713)
T COG2217 389 RGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------------------------------DE 433 (713)
T ss_pred CceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------------------------------CH
Confidence 9999999999999999999999999999999999999876531 11
Q ss_pred hHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEE
Q 001949 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (992)
Q Consensus 405 ~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (992)
..+..++.++. ..+.||...|++++++..|..... ..
T Consensus 434 ~~~L~laAalE----------------~~S~HPiA~AIv~~a~~~~~~~~~---------------------------~~ 470 (713)
T COG2217 434 DELLALAAALE----------------QHSEHPLAKAIVKAAAERGLPDVE---------------------------DF 470 (713)
T ss_pred HHHHHHHHHHH----------------hcCCChHHHHHHHHHHhcCCCCcc---------------------------ce
Confidence 22333333221 133699999999999887632211 01
Q ss_pred EeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcc
Q 001949 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (992)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 564 (992)
..+| .+.+.- .-+| ..+.-|++..+.+.- . ..+. ..+..+.+.. +|..++.++
T Consensus 471 ~~i~----G~Gv~~--~v~g--~~v~vG~~~~~~~~~---------~--~~~~-----~~~~~~~~~~-~G~t~v~va-- 523 (713)
T COG2217 471 EEIP----GRGVEA--EVDG--ERVLVGNARLLGEEG---------I--DLPL-----LSERIEALES-EGKTVVFVA-- 523 (713)
T ss_pred eeec----cCcEEE--EECC--EEEEEcCHHHHhhcC---------C--Cccc-----hhhhHHHHHh-cCCeEEEEE--
Confidence 1111 111111 1122 445678888765421 1 0110 2233444444 666555554
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 001949 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (992)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (992)
.|.+++|+++++|++||+++++|++||+.|++++|+|||+..+|+++|+++||+.
T Consensus 524 --------------~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId~----------- 578 (713)
T COG2217 524 --------------VDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGIDE----------- 578 (713)
T ss_pred --------------ECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChHh-----------
Confidence 4669999999999999999999999999999999999999999999999999976
Q ss_pred chhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCee
Q 001949 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (992)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~v 724 (992)
+++.+.|++|.++|+.+|++|++|+|+|||.||+|+|.+||||||||+|+|.++++||++
T Consensus 579 --------------------v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAmG~GtDvA~eaADvv 638 (713)
T COG2217 579 --------------------VRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAMGSGTDVAIEAADVV 638 (713)
T ss_pred --------------------heccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEeecCCcHHHHHhCCEE
Confidence 788999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVC 764 (992)
Q Consensus 725 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 764 (992)
++++++..++.+++.+|+++.++++++.|.+.+|...+..
T Consensus 639 L~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ipl 678 (713)
T COG2217 639 LMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPL 678 (713)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999775543
No 26
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=1.9e-72 Score=677.54 Aligned_cols=500 Identities=25% Similarity=0.350 Sum_probs=424.8
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~ 165 (992)
.|.++.+++++++++.+++.+++.|+++.+++|.++.|.+++|+|||++++|++++|+|||+|.+++||+|||||+|++
T Consensus 205 ~~~~a~~i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi~- 283 (741)
T PRK11033 205 ATAEAAMVLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLLS- 283 (741)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEEE-
Confidence 4567788888999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCc
Q 001949 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (992)
Q Consensus 166 ~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 245 (992)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.+|+|.+.+.+.+.+++|
T Consensus 284 --g~~~vdes~lTGEs~Pv~k~~-------------Gd~V~aGt~~~~G~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~ 348 (741)
T PRK11033 284 --PFASFDESALTGESIPVERAT-------------GEKVPAGATSVDRLVTLEVLSEPGASAIDRILHLIEEAEERRAP 348 (741)
T ss_pred --CcEEeecccccCCCCCEecCC-------------CCeeccCCEEcCceEEEEEEeccccCHHHHHHHHHHHhhccCCh
Confidence 678999999999999999987 56799999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhc
Q 001949 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (992)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~ 325 (992)
+++.+++++.+++++++++++++++++...+.. . +...+..++++++++|||+|.++.+++...+..+++|+
T Consensus 349 ~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~~~----~----~~~~i~~a~svlviacPcaL~latP~a~~~~l~~aar~ 420 (741)
T PRK11033 349 IERFIDRFSRIYTPAIMLVALLVILVPPLLFAA----P----WQEWIYRGLTLLLIGCPCALVISTPAAITSGLAAAARR 420 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----C----HHHHHHHHHHHHHHhchhhhhhhhHHHHHHHHHHHHHC
Confidence 999999999999999999999888876433221 1 22346678899999999999999999999999999999
Q ss_pred ccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCch
Q 001949 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (992)
Q Consensus 326 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (992)
|+++|+.+++|+|+++|++|||||||||+|+|+|.++...+.. ..+
T Consensus 421 gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~ 466 (741)
T PRK11033 421 GALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATGI----------------------------------SES 466 (741)
T ss_pred CeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCCC----------------------------------CHH
Confidence 9999999999999999999999999999999999998653210 112
Q ss_pred HHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEE
Q 001949 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (992)
Q Consensus 406 ~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (992)
.+..++. ++ + ....||.+.|+++++++.+..
T Consensus 467 ~~l~~aa--~~------e--------~~s~hPia~Ai~~~a~~~~~~--------------------------------- 497 (741)
T PRK11033 467 ELLALAA--AV------E--------QGSTHPLAQAIVREAQVRGLA--------------------------------- 497 (741)
T ss_pred HHHHHHH--HH------h--------cCCCCHHHHHHHHHHHhcCCC---------------------------------
Confidence 2222221 11 1 123699999999998876542
Q ss_pred eecCCCCCceEE---EEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhh
Q 001949 486 ILEFSRDRKMMS---VLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALA 562 (992)
Q Consensus 486 ~~~F~s~~k~ms---viv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a 562 (992)
+||.++++.+. +....+|+. +..|+++.+.+ ++ +.+.+.++++.. +|.+++.+|
T Consensus 498 -~~~~~~~~~~~g~Gv~~~~~g~~--~~ig~~~~~~~---------------~~----~~~~~~~~~~~~-~g~~~v~va 554 (741)
T PRK11033 498 -IPEAESQRALAGSGIEGQVNGER--VLICAPGKLPP---------------LA----DAFAGQINELES-AGKTVVLVL 554 (741)
T ss_pred -CCCCcceEEEeeEEEEEEECCEE--EEEecchhhhh---------------cc----HHHHHHHHHHHh-CCCEEEEEE
Confidence 23344444332 111223332 33578876643 11 123344566776 999999988
Q ss_pred cccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccc
Q 001949 563 LKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRS 642 (992)
Q Consensus 563 ~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~ 642 (992)
+ |.+++|+++++|++||+++++|++|+++|++++|+|||+..+|.++|+++||.
T Consensus 555 ~----------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~---------- 608 (741)
T PRK11033 555 R----------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID---------- 608 (741)
T ss_pred E----------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC----------
Confidence 4 67899999999999999999999999999999999999999999999999985
Q ss_pred ccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccC
Q 001949 643 YTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (992)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad 722 (992)
.+++..|++|.++|+.+|+. +.|+|+|||.||+|||++|||||+||++++.++++||
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~g~~~~~a~~~ad 665 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAMGSGTDVALETAD 665 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEecCCCHHHHHhCC
Confidence 34568899999999999965 5899999999999999999999999999999999999
Q ss_pred eeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 723 MVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVC 764 (992)
Q Consensus 723 ~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 764 (992)
+++.++++..+..+++.||+++.|+++++.|.+.+|++.+..
T Consensus 666 ivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~ 707 (741)
T PRK11033 666 AALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVT 707 (741)
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999765443
No 27
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=2.6e-72 Score=656.98 Aligned_cols=478 Identities=43% Similarity=0.590 Sum_probs=418.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceE
Q 001949 94 LLILAANAAVGVITETNAEKALEELRA--YQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (992)
Q Consensus 94 i~~i~~~~~~~~~~~~k~~~~~~~l~~--~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~ 171 (992)
+++++++.+++.++++++++..+.+.+ ..+.+++|+|+| +++|++++|+|||+|.+++||+|||||++++ |.+.
T Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl~---g~~~ 78 (499)
T TIGR01494 3 LILVLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLLS---GSCF 78 (499)
T ss_pred EEhhHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEEE---ccEE
Confidence 345667788899999999999999998 788899999999 9999999999999999999999999999995 6999
Q ss_pred EecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHH
Q 001949 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (992)
Q Consensus 172 Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~ 251 (992)
||||+|||||.|+.|.+ ++.+++||.+.+|+..+.|+.+|.+|..+++...+......+++++++.+
T Consensus 79 vdes~LTGEs~pv~k~~-------------g~~v~~gs~~~~G~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~ 145 (499)
T TIGR01494 79 VDESNLTGESVPVLKTA-------------GDAVFAGTYVFNGTLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLD 145 (499)
T ss_pred EEcccccCCCCCeeecc-------------CCccccCcEEeccEEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHH
Confidence 99999999999999987 45689999999999999999999999999999999888777899999999
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccc
Q 001949 252 EFG-TFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVR 330 (992)
Q Consensus 252 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk 330 (992)
++. .++++++++++++.++.+....... ..+...+..++++++++|||+|++++++++..+..+++++|+++|
T Consensus 146 ~~~~~~~~~~~~~la~~~~~~~~~~~~~~------~~~~~~~~~~~~vl~~~~P~aL~~~~~~~~~~~~~~~~~~gilvk 219 (499)
T TIGR01494 146 RLSDIIFILFVLLIALAVFLFWAIGLWDP------NSIFKIFLRALILLVIAIPIALPLAVTIALAVGDARLAKKGIVVR 219 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHccc------ccHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHCCcEEe
Confidence 998 6777777777776666554332110 013456788999999999999999999999999999999999999
Q ss_pred cccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHH
Q 001949 331 SLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHI 410 (992)
Q Consensus 331 ~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 410 (992)
+++++|+||+++++|||||||||+|+|++.++++.+.
T Consensus 220 ~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~------------------------------------------- 256 (499)
T TIGR01494 220 SLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG------------------------------------------- 256 (499)
T ss_pred chhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC-------------------------------------------
Confidence 9999999999999999999999999999999865310
Q ss_pred HHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCC
Q 001949 411 ARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFS 490 (992)
Q Consensus 411 ~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~ 490 (992)
.+..+||.|.|++++++..+ +...||+
T Consensus 257 --------------------~~~s~hp~~~ai~~~~~~~~---------------------------------~~~~~f~ 283 (499)
T TIGR01494 257 --------------------EYLSGHPDERALVKSAKWKI---------------------------------LNVFEFS 283 (499)
T ss_pred --------------------CcCCCChHHHHHHHHhhhcC---------------------------------cceeccC
Confidence 01236899999998875411 1357999
Q ss_pred CCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCccc
Q 001949 491 RDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINR 570 (992)
Q Consensus 491 s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~ 570 (992)
+.+++|+++++.+++ .++||+++.+.+.|.+ +.+..++++. +|+|++++|++
T Consensus 284 ~~~~~~~~~~~~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~-~g~~~~~~a~~------ 335 (499)
T TIGR01494 284 SVRKRMSVIVRGPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQ-SGLRVLAVASK------ 335 (499)
T ss_pred CCCceEEEEEecCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHh-CCCEEEEEEEC------
Confidence 999999999987443 4789999999998842 1223345666 99999999963
Q ss_pred ccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhc
Q 001949 571 QTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEE 650 (992)
Q Consensus 571 ~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~ 650 (992)
.+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 336 ----------~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------- 386 (499)
T TIGR01494 336 ----------ETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------- 386 (499)
T ss_pred ----------CeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc-------------------
Confidence 269999999999999999999999999999999999999999999999985
Q ss_pred CCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCc
Q 001949 651 LPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNF 730 (992)
Q Consensus 651 ~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~ 730 (992)
+++++|++|.++|+.+|+.|+.|+|+|||.||+||+++|||||+|+ ++++||+++.++++
T Consensus 387 ---------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~~-----a~~~adivl~~~~l 446 (499)
T TIGR01494 387 ---------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAMG-----AKAAADIVLLDDNL 446 (499)
T ss_pred ---------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCccccc-----hHHhCCeEEecCCH
Confidence 4679999999999999999999999999999999999999999997 68899999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 731 ATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFV 767 (992)
Q Consensus 731 ~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~ 767 (992)
..+..++++||+++.++++++.|.+++|+..+...++
T Consensus 447 ~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 447 STIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999886555444
No 28
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-72 Score=634.48 Aligned_cols=560 Identities=22% Similarity=0.290 Sum_probs=456.2
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCE-EEEeeCCCCCCCcEEEecCCCccCCcee
Q 001949 83 GLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC-FSILPAAELVPGDIVEVNVGCKIPADMR 161 (992)
Q Consensus 83 ~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~-~~~i~~~~Lv~GDII~l~~G~~iPaD~~ 161 (992)
+...|-++.+++.++.+..+++.....|+...+..|..+.|.++.++.+|+ .++|+.+.+++||+|++.||++||+||+
T Consensus 337 ~~tfFdt~~MLi~fi~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~ 416 (951)
T KOG0207|consen 337 PPTFFDTSPMLITFITLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGV 416 (951)
T ss_pred cchhccccHHHHHHHHHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccE
Confidence 455677788888899999999999999999999999999999999999996 8999999999999999999999999999
Q ss_pred eeeecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCC
Q 001949 162 MIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTED 241 (992)
Q Consensus 162 ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~ 241 (992)
++ .|+++||||.+|||++|+.|++ ++.+.+||.+.+|.....++++|.+|.+++|.+++++++.
T Consensus 417 Vv---~Gss~VDEs~iTGEs~PV~Kk~-------------gs~ViaGsiN~nG~l~VkaT~~g~dttla~IvkLVEEAQ~ 480 (951)
T KOG0207|consen 417 VV---DGSSEVDESLITGESMPVPKKK-------------GSTVIAGSINLNGTLLVKATKVGGDTTLAQIVKLVEEAQL 480 (951)
T ss_pred EE---eCceeechhhccCCceecccCC-------------CCeeeeeeecCCceEEEEEEeccccchHHHHHHHHHHHHc
Confidence 99 5889999999999999999997 6679999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC--CCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhh
Q 001949 242 EVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRD--PSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGT 319 (992)
Q Consensus 242 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~ 319 (992)
.+.|+|+..|+++.++++.++++++..+++|...... .....|...+...|..++++++++|||+|.++.|++...+.
T Consensus 481 sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~~~~~~~~~~~a~~~aisVlviACPCaLgLATPtAvmvat 560 (951)
T KOG0207|consen 481 SKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKYPRSFFDAFSHAFQLAISVLVIACPCALGLATPTAVMVAT 560 (951)
T ss_pred ccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccCcchhhHHHHHHHHhhheEEEEECchhhhcCCceEEEEEe
Confidence 9999999999999999999999998888887665431 22233456677788999999999999999999999999999
Q ss_pred hhhhhcccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCcccc
Q 001949 320 KRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLE 399 (992)
Q Consensus 320 ~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (992)
...+++|+++|..+.+|.+.+++++.||||||||+|++.|.++......
T Consensus 561 gvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~------------------------------- 609 (951)
T KOG0207|consen 561 GVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP------------------------------- 609 (951)
T ss_pred chhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc-------------------------------
Confidence 9999999999999999999999999999999999999999998765310
Q ss_pred CCCCchHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccc
Q 001949 400 FPAQLPCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEI 479 (992)
Q Consensus 400 ~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (992)
-+..+++.+.+.. +....||...|+++||++.......
T Consensus 610 -----~~~~e~l~~v~a~-------------Es~SeHPig~AIv~yak~~~~~~~~------------------------ 647 (951)
T KOG0207|consen 610 -----ISLKEALALVAAM-------------ESGSEHPIGKAIVDYAKEKLVEPNP------------------------ 647 (951)
T ss_pred -----ccHHHHHHHHHHH-------------hcCCcCchHHHHHHHHHhcccccCc------------------------
Confidence 0112222221111 1123699999999999987511100
Q ss_pred cccEEEeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhh
Q 001949 480 EFKKVSILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCL 559 (992)
Q Consensus 480 ~~~~l~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l 559 (992)
-..+..-.|..+.....+.+ .++. .+-|.-+.+.+. |...+ +.+++.+++... .|..+.
T Consensus 648 -~~~~~~~~~pg~g~~~~~~~--~~~~--i~iGN~~~~~r~---------~~~~~------~~i~~~~~~~e~-~g~tvv 706 (951)
T KOG0207|consen 648 -EGVLSFEYFPGEGIYVTVTV--DGNE--VLIGNKEWMSRN---------GCSIP------DDILDALTESER-KGQTVV 706 (951)
T ss_pred -cccceeecccCCCcccceEE--eeeE--EeechHHHHHhc---------CCCCc------hhHHHhhhhHhh-cCceEE
Confidence 00011111221221211111 2222 556887766552 22221 225556665555 777777
Q ss_pred hhhcccCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccc
Q 001949 560 ALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639 (992)
Q Consensus 560 ~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 639 (992)
.++ .|.+++|+++++|++|+|+..+|+.||+.|++++|+||||..+|+++|+++|++.
T Consensus 707 ~v~----------------vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~~------ 764 (951)
T KOG0207|consen 707 YVA----------------VNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGIDN------ 764 (951)
T ss_pred EEE----------------ECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcce------
Confidence 666 4889999999999999999999999999999999999999999999999999765
Q ss_pred cccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHh
Q 001949 640 GRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKS 719 (992)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~ 719 (992)
|+|...|+||.+.|+.+|++++.|+|+|||.||+|||.+|||||+||.+++.|.+
T Consensus 765 -------------------------V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig~gs~vAie 819 (951)
T KOG0207|consen 765 -------------------------VYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIGAGSDVAIE 819 (951)
T ss_pred -------------------------EEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeeccccHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999
Q ss_pred ccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHH---HHHHHHHHhhhhhhh
Q 001949 720 ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPDTLAPVQ---LLWVNLVTDGLPATA 796 (992)
Q Consensus 720 ~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~~~~~~~~~~l~~~~---~l~~~~~~~~~p~~~ 796 (992)
+||+|++.+++.+++.+|+.+|++..|+|.++.|++.+|+..+ ++..+.|+.++..+.||. .+..+.+...+-++.
T Consensus 820 aADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~I-pIAagvF~P~~~~L~Pw~A~lama~SSvsVv~sSll 898 (951)
T KOG0207|consen 820 AADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGI-PIAAGVFAPFGIVLPPWMASLAMAASSVSVVLSSLL 898 (951)
T ss_pred hCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hhheecccCCccccCchHHHHHHHhhhHHHhhhHHH
Confidence 9999999999999999999999999999999999999998754 344555555543345544 333444444444554
Q ss_pred hccC
Q 001949 797 IGFN 800 (992)
Q Consensus 797 l~~~ 800 (992)
|-..
T Consensus 899 Lk~~ 902 (951)
T KOG0207|consen 899 LKRY 902 (951)
T ss_pred Hhhc
Confidence 4433
No 29
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=1.1e-70 Score=648.36 Aligned_cols=508 Identities=27% Similarity=0.374 Sum_probs=423.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECC-EEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG-CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g-~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
.|.++++++++++++.+++.++++|+++.++++.+..+.+++|+|+| ++++|++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi~ 96 (556)
T TIGR01525 17 LVLEGALLLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVIS 96 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEEe
Confidence 56788899999999999999999999999999999999999999996 99999999999999999999999999999995
Q ss_pred ecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001949 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (992)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (992)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|+++|.+|++|++.+.+.+.+.+++
T Consensus 97 ---g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~g~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~ 160 (556)
T TIGR01525 97 ---GESEVDESALTGESMPVEKKE-------------GDEVFAGTINGDGSLTIRVTKLGEDSTLAQIVKLVEEAQSSKA 160 (556)
T ss_pred ---cceEEeehhccCCCCCEecCC-------------cCEEeeceEECCceEEEEEEEecccCHHHHHHHHHHHHhhcCC
Confidence 678999999999999999986 5679999999999999999999999999999999998888899
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 001949 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (992)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (992)
|+++.+++++.++++++++++++.++++...... ..+..++++++++|||+|++++++++..+.+++++
T Consensus 161 ~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~~~-----------~~~~~~~~vlv~~~P~al~l~~~~~~~~~~~~~~~ 229 (556)
T TIGR01525 161 PIQRLADRIASYYVPAVLAIALLTFVVWLALGAL-----------GALYRALAVLVVACPCALGLATPVAILVAIGVAAR 229 (556)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----------hHHHHHHHHHhhccccchhehhHHHHHHHHHHHHH
Confidence 9999999999999998888888888776433211 45677899999999999999999999999999999
Q ss_pred cccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCc
Q 001949 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (992)
Q Consensus 325 ~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (992)
+|+++|+++++|+||++|++|||||||||+|+|++.++...+... ...
T Consensus 230 ~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~--------------------------------~~~ 277 (556)
T TIGR01525 230 RGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS--------------------------------ISE 277 (556)
T ss_pred CCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC--------------------------------ccH
Confidence 999999999999999999999999999999999999987542100 001
Q ss_pred hHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEE
Q 001949 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (992)
Q Consensus 405 ~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (992)
+.+..+ +.++ . ....||.+.|+++++++.|.+... .+ ..
T Consensus 278 ~~~l~~--a~~~-e-------------~~~~hp~~~Ai~~~~~~~~~~~~~------------------------~~-~~ 316 (556)
T TIGR01525 278 EELLAL--AAAL-E-------------QSSSHPLARAIVRYAKKRGLELPK------------------------QE-DV 316 (556)
T ss_pred HHHHHH--HHHH-h-------------ccCCChHHHHHHHHHHhcCCCccc------------------------cc-Ce
Confidence 122222 1111 1 113589999999999887653210 00 00
Q ss_pred EeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcc
Q 001949 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (992)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 564 (992)
..++ .+.++..+ +|. ..+..|+++.+ + + ++. . .......+..++. +|+|++.++
T Consensus 317 ~~~~----~~gi~~~~--~g~-~~~~lg~~~~~-~-~-------~~~--~-----~~~~~~~~~~~~~-~g~~~~~v~-- 370 (556)
T TIGR01525 317 EEVP----GKGVEATV--DGQ-EEVRIGNPRLL-E-L-------AAE--P-----ISASPDLLNEGES-QGKTVVFVA-- 370 (556)
T ss_pred eEec----CCeEEEEE--CCe-eEEEEecHHHH-h-h-------cCC--C-----chhhHHHHHHHhh-CCcEEEEEE--
Confidence 0111 11222222 110 22344665544 1 0 111 0 1112234456666 899888877
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCC-cEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc
Q 001949 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAG-IRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY 643 (992)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~g-i~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~ 643 (992)
.|.+++|.+.++|+++|+++++|++|+++| ++++|+|||+..++..+++++|+..
T Consensus 371 --------------~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~~---------- 426 (556)
T TIGR01525 371 --------------VDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGIDE---------- 426 (556)
T ss_pred --------------ECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCCe----------
Confidence 366899999999999999999999999999 9999999999999999999999964
Q ss_pred cchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCe
Q 001949 644 TASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM 723 (992)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~ 723 (992)
+|+++.|++|.++++.++..++.|+|+|||.||++|+++||+||++|++++.+++.||+
T Consensus 427 ---------------------~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~Ad~ 485 (556)
T TIGR01525 427 ---------------------VHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAMGAGSDVAIEAADI 485 (556)
T ss_pred ---------------------eeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEeCCCCHHHHHhCCE
Confidence 78889999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVC 764 (992)
Q Consensus 724 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~ 764 (992)
++.++++..+.++++.||+++.++++++.|.+.+|+..+..
T Consensus 486 vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~ 526 (556)
T TIGR01525 486 VLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPL 526 (556)
T ss_pred EEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999876543
No 30
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=6.7e-70 Score=637.13 Aligned_cols=488 Identities=26% Similarity=0.380 Sum_probs=412.6
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM 165 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~ 165 (992)
.|+++.+++++++++.+++.++++|+++.++++.+..+.+++|+|||+++++++++|+|||+|.+++||+|||||++++
T Consensus 17 ~~~~~~~i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii~- 95 (536)
T TIGR01512 17 EYLEGALLLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVLS- 95 (536)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEEe-
Confidence 5788889999999999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred cCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCc
Q 001949 166 LSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTP 245 (992)
Q Consensus 166 ~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~ 245 (992)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|+++++|++||.+|.+|++.+.+.+.+.+++|
T Consensus 96 --g~~~vdes~lTGEs~pv~k~~-------------g~~v~aGt~v~~G~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~ 160 (536)
T TIGR01512 96 --GTSTVDESALTGESVPVEKAP-------------GDEVFAGAINLDGVLTIVVTKLPADSTIAKIVNLVEEAQSRKAK 160 (536)
T ss_pred --CcEEEEecccCCCCCcEEeCC-------------CCEEEeeeEECCceEEEEEEEeccccHHHHHHHHHHHHhhCCCh
Confidence 788999999999999999986 56799999999999999999999999999999999988888999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhc
Q 001949 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARL 325 (992)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~ 325 (992)
+++.+++++.++++++++++++.++++..... + ...+..++++++++|||+|++++++++..+..+++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~svlv~~~P~aL~la~~~~~~~~~~~~~k~ 230 (536)
T TIGR01512 161 TQRFIDRFARYYTPVVLAIALAIWLVPGLLKR------W----PFWVYRALVLLVVASPCALVISAPAAYLSAISAAARH 230 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc------c----HHHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHC
Confidence 99999999999999988888887776543211 1 1156678899999999999999999999999999999
Q ss_pred ccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCch
Q 001949 326 NAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLP 405 (992)
Q Consensus 326 ~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (992)
|+++|+++++|++|+++++|||||||||+|+|++.++...
T Consensus 231 gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------------------------------- 270 (536)
T TIGR01512 231 GILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------------------------------- 270 (536)
T ss_pred CeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH----------------------------------------
Confidence 9999999999999999999999999999999999887421
Q ss_pred HHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEE
Q 001949 406 CLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVS 485 (992)
Q Consensus 406 ~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 485 (992)
.+..++. ++ . ....||.+.|+++++++.+ +. ....
T Consensus 271 ~~l~~a~--~~-e-------------~~~~hp~~~Ai~~~~~~~~-~~----------------------------~~~~ 305 (536)
T TIGR01512 271 EVLRLAA--AA-E-------------QASSHPLARAIVDYARKRE-NV----------------------------ESVE 305 (536)
T ss_pred HHHHHHH--HH-h-------------ccCCCcHHHHHHHHHHhcC-CC----------------------------cceE
Confidence 1111111 11 1 1225899999999987654 11 0011
Q ss_pred eecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhccc
Q 001949 486 ILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQ 565 (992)
Q Consensus 486 ~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~ 565 (992)
.+| .+.+...+ +++. +..|+++.+.+. +. + .+.. +|.+++.+
T Consensus 306 ~~~----g~gi~~~~--~g~~--~~ig~~~~~~~~---------~~----~------------~~~~-~~~~~~~v---- 347 (536)
T TIGR01512 306 EVP----GEGVRAVV--DGGE--VRIGNPRSLEAA---------VG----A------------RPES-AGKTIVHV---- 347 (536)
T ss_pred Eec----CCeEEEEE--CCeE--EEEcCHHHHhhc---------CC----c------------chhh-CCCeEEEE----
Confidence 111 11222222 2332 335877654321 10 0 2222 55444333
Q ss_pred CCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 001949 566 MPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (992)
Q Consensus 566 l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (992)
..|..++|.+.++|++||+++++|++|+++|+ +++|+|||+..++..+++++|+..
T Consensus 348 ------------~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~~----------- 404 (536)
T TIGR01512 348 ------------ARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGIDE----------- 404 (536)
T ss_pred ------------EECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCChh-----------
Confidence 35789999999999999999999999999999 999999999999999999999965
Q ss_pred chhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CCcHHHHhccCe
Q 001949 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SGTAVAKSASDM 723 (992)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~~~~~~~~ad~ 723 (992)
+|++..|++|.++++.++++++.|+|+|||.||++|+++||+||++| ++++.++++||+
T Consensus 405 --------------------~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~~~~~ad~ 464 (536)
T TIGR01512 405 --------------------VHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAMGASGSDVAIETADV 464 (536)
T ss_pred --------------------hhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHHHHHhCCE
Confidence 56778899999999999999999999999999999999999999999 889999999999
Q ss_pred eecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 724 VLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCI 765 (992)
Q Consensus 724 vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~ 765 (992)
++.++++..+.++++.||+++.++++++.|.+.+|+..+...
T Consensus 465 vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a 506 (536)
T TIGR01512 465 VLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLA 506 (536)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997655443
No 31
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=7.8e-69 Score=629.75 Aligned_cols=491 Identities=26% Similarity=0.386 Sum_probs=412.2
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEEC-CEEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 86 AFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 86 ~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~-g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
+|.++.+++++++++.+++.+.++|+++.+++|.+..|++++++|+ |++++|+.++|+|||+|.+++||+|||||++++
T Consensus 53 ~~~~~~~i~~~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~~ 132 (562)
T TIGR01511 53 FFDASAMLITFILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVIE 132 (562)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEEE
Confidence 4455566677788888999999999999999999999999999985 677999999999999999999999999999995
Q ss_pred ecCCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCC
Q 001949 165 MLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVT 244 (992)
Q Consensus 165 ~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~ 244 (992)
|++.||||+|||||.|+.|.+ ++.+|+||.+.+|.++++|+++|.+|.+|++.+.+.+.+.+++
T Consensus 133 ---g~~~vdes~lTGEs~pv~k~~-------------gd~V~aGt~~~~g~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~ 196 (562)
T TIGR01511 133 ---GESEVDESLVTGESLPVPKKV-------------GDPVIAGTVNGTGSLVVRATATGEDTTLAQIVRLVRQAQQSKA 196 (562)
T ss_pred ---CceEEehHhhcCCCCcEEcCC-------------CCEEEeeeEECCceEEEEEEEecCCChHHHHHHHHHHHHhcCC
Confidence 788999999999999999987 5679999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhh
Q 001949 245 PLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMAR 324 (992)
Q Consensus 245 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~ 324 (992)
|+++..++++.++++++++++++.++++. ..+..++++++++|||+|++++++++..+..++++
T Consensus 197 ~~~~~~d~~a~~~~~~v~~~a~~~~~~~~----------------~~~~~~~svlvvacPcaL~la~p~a~~~~~~~aa~ 260 (562)
T TIGR01511 197 PIQRLADKVAGYFVPVVIAIALITFVIWL----------------FALEFAVTVLIIACPCALGLATPTVIAVATGLAAK 260 (562)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------HHHHHHHHHHHHhccchhhhHHHHHHHHHHHHHHH
Confidence 99999999999999988888877766542 24667899999999999999999999999999999
Q ss_pred cccccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCc
Q 001949 325 LNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQL 404 (992)
Q Consensus 325 ~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (992)
+|+++|+++++|+|+++|++|||||||||+|+|++.++...+.. ..
T Consensus 261 ~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~~----------------------------------~~ 306 (562)
T TIGR01511 261 NGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGDR----------------------------------DR 306 (562)
T ss_pred CCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCCC----------------------------------CH
Confidence 99999999999999999999999999999999999998653210 11
Q ss_pred hHHHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEE
Q 001949 405 PCLLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKV 484 (992)
Q Consensus 405 ~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 484 (992)
+.+..+ +.+++. ...||.+.|+++++++.+..... ....
T Consensus 307 ~~~l~~--aa~~e~--------------~s~HPia~Ai~~~~~~~~~~~~~-------------------------~~~~ 345 (562)
T TIGR01511 307 TELLAL--AAALEA--------------GSEHPLAKAIVSYAKEKGITLVE-------------------------VSDF 345 (562)
T ss_pred HHHHHH--HHHHhc--------------cCCChHHHHHHHHHHhcCCCcCC-------------------------CCCe
Confidence 222222 222222 12589999999999877643210 0001
Q ss_pred EeecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcc
Q 001949 485 SILEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALK 564 (992)
Q Consensus 485 ~~~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~ 564 (992)
..+| .+.+...+ ++ .-+..|+++.+.+. +.. .+ ++.. +|.+++.++
T Consensus 346 ~~~~----g~Gi~~~~--~g--~~~~iG~~~~~~~~---------~~~--~~------------~~~~-~g~~~~~~~-- 391 (562)
T TIGR01511 346 KAIP----GIGVEGTV--EG--TKIQLGNEKLLGEN---------AIK--ID------------GKAE-QGSTSVLVA-- 391 (562)
T ss_pred EEEC----CceEEEEE--CC--EEEEEECHHHHHhC---------CCC--CC------------hhhh-CCCEEEEEE--
Confidence 1111 22233222 23 23457888876431 110 11 1122 666665543
Q ss_pred cCCcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc
Q 001949 565 QMPINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT 644 (992)
Q Consensus 565 ~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~ 644 (992)
.|.+++|.+.++|++||+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 392 --------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~------------ 445 (562)
T TIGR01511 392 --------------VNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN------------ 445 (562)
T ss_pred --------------ECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc------------
Confidence 578999999999999999999999999999999999999999999999999983
Q ss_pred chhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCee
Q 001949 645 ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMV 724 (992)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~v 724 (992)
++++..|++|.++++.++++++.|+|+|||.||++|+++||+||+||++++.++++||++
T Consensus 446 --------------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~g~g~~~a~~~Advv 505 (562)
T TIGR01511 446 --------------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAIGAGTDVAIEAADVV 505 (562)
T ss_pred --------------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEeCCcCHHHHhhCCEE
Confidence 466788999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 725 LADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (992)
Q Consensus 725 l~~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 763 (992)
+.++++..+.++++.||+++.++++++.|.+.+|+..+.
T Consensus 506 l~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~ 544 (562)
T TIGR01511 506 LMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIP 544 (562)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987543
No 32
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=1.6e-67 Score=649.08 Aligned_cols=505 Identities=25% Similarity=0.312 Sum_probs=423.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeec
Q 001949 87 FLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEML 166 (992)
Q Consensus 87 ~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~ 166 (992)
|-++..+++++.+..+++.+.+.|+++.+++|.++.|++++++|+|++++|+.++|+|||+|++++||+|||||+|++
T Consensus 286 ~~~~~~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~~-- 363 (834)
T PRK10671 286 YEASAMIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEITQ-- 363 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEEE--
Confidence 344678888899999999999999999999999999999999999999999999999999999999999999999995
Q ss_pred CCceEEecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCch
Q 001949 167 SNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPL 246 (992)
Q Consensus 167 ~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l 246 (992)
|.+.||||+|||||.|+.|.+ ++.+|+||.+.+|.+.++|+++|.+|.+++|.+.+.+.+..++++
T Consensus 364 -g~~~vdeS~lTGEs~pv~k~~-------------gd~V~aGt~~~~G~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~ 429 (834)
T PRK10671 364 -GEAWLDEAMLTGEPIPQQKGE-------------GDSVHAGTVVQDGSVLFRASAVGSHTTLSRIIRMVRQAQSSKPEI 429 (834)
T ss_pred -ceEEEeehhhcCCCCCEecCC-------------CCEEEecceecceeEEEEEEEEcCcChHHHHHHHHHHHhccCCcH
Confidence 789999999999999999987 567999999999999999999999999999999999988889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcc
Q 001949 247 KKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLN 326 (992)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~ 326 (992)
++..++++.++++++++++++.++++...... ..+...+..++++++++|||+|++++++++..+..+++++|
T Consensus 430 ~~~~d~~a~~~v~~v~~~a~~~~~~~~~~~~~-------~~~~~~~~~a~~vlv~acPcaL~la~p~a~~~~~~~~a~~g 502 (834)
T PRK10671 430 GQLADKISAVFVPVVVVIALVSAAIWYFFGPA-------PQIVYTLVIATTVLIIACPCALGLATPMSIISGVGRAAEFG 502 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-------hHHHHHHHHHHHHHHHhcccchhhhHHHHHHHHHHHHHHCC
Confidence 99999999999999888888777666432111 11234567789999999999999999999999999999999
Q ss_pred cccccccccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchH
Q 001949 327 AIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPC 406 (992)
Q Consensus 327 i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (992)
+++|+.+++|++|++|++|||||||||+|+|+|.++...+.. ....
T Consensus 503 ilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~~----------------------------------~~~~ 548 (834)
T PRK10671 503 VLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNGV----------------------------------DEAQ 548 (834)
T ss_pred eEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCCC----------------------------------CHHH
Confidence 999999999999999999999999999999999987643210 1111
Q ss_pred HHHHHHHhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEe
Q 001949 407 LLHIARCSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSI 486 (992)
Q Consensus 407 ~~~l~~~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 486 (992)
+.. .+.+++.. ..||.+.|++++++....... .+++ .
T Consensus 549 ~l~--~a~~~e~~--------------s~hp~a~Ai~~~~~~~~~~~~------------------------~~~~---~ 585 (834)
T PRK10671 549 ALR--LAAALEQG--------------SSHPLARAILDKAGDMTLPQV------------------------NGFR---T 585 (834)
T ss_pred HHH--HHHHHhCC--------------CCCHHHHHHHHHHhhCCCCCc------------------------ccce---E
Confidence 222 22233321 258999999988763221100 0011 0
Q ss_pred ecCCCCCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccC
Q 001949 487 LEFSRDRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQM 566 (992)
Q Consensus 487 ~~F~s~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l 566 (992)
+| .+.+... .+++ .+.+|+++.+.+.. . + ++.+.+.++++.. +|.+++.+++
T Consensus 586 ~~----g~Gv~~~--~~g~--~~~~G~~~~~~~~~---------~----~---~~~~~~~~~~~~~-~g~~~v~va~--- 637 (834)
T PRK10671 586 LR----GLGVSGE--AEGH--ALLLGNQALLNEQQ---------V----D---TKALEAEITAQAS-QGATPVLLAV--- 637 (834)
T ss_pred ec----ceEEEEE--ECCE--EEEEeCHHHHHHcC---------C----C---hHHHHHHHHHHHh-CCCeEEEEEE---
Confidence 00 0112222 1333 34569999764321 1 1 1234455666666 8988888773
Q ss_pred CcccccCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch
Q 001949 567 PINRQTLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS 646 (992)
Q Consensus 567 ~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~ 646 (992)
|..++|+++++|++||+++++|++|++.|++++|+|||+..++..+++++|+..
T Consensus 638 -------------~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~~------------- 691 (834)
T PRK10671 638 -------------DGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGIDE------------- 691 (834)
T ss_pred -------------CCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCE-------------
Confidence 567999999999999999999999999999999999999999999999999964
Q ss_pred hhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeec
Q 001949 647 EFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLA 726 (992)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~ 726 (992)
++++..|++|.++++.++.+++.|+|+|||.||++|+++||+||+||++++.++++||+++.
T Consensus 692 ------------------~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~g~g~~~a~~~ad~vl~ 753 (834)
T PRK10671 692 ------------------VIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAMGGGSDVAIETAAITLM 753 (834)
T ss_pred ------------------EEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEecCCCHHHHHhCCEEEe
Confidence 78889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 727 DDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVV 763 (992)
Q Consensus 727 ~~~~~~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~ 763 (992)
++++.++..+++.||.++.++++++.|.+.+|+..+.
T Consensus 754 ~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~ 790 (834)
T PRK10671 754 RHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIP 790 (834)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999987644
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-59 Score=494.74 Aligned_cols=515 Identities=25% Similarity=0.360 Sum_probs=404.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEEEC-CEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEE
Q 001949 95 LILAANAAVGVITETNAEKALEELRAYQAD-IATVLRN-GCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRV 172 (992)
Q Consensus 95 ~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~-~~~V~R~-g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~V 172 (992)
+.++...+-+.+.|-|.+..-++|++.+.+ .++++++ |.++.+++.+|+.||+|++++||.||+||.+++ |...|
T Consensus 74 fTVlFANfaEa~AEGrgKAqAdsLr~~~~~~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVIe---G~asV 150 (681)
T COG2216 74 FTVLFANFAEAVAEGRGKAQADSLRKTKTETIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVIE---GVASV 150 (681)
T ss_pred HHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEEe---eeeec
Confidence 344555566777788888888888766544 4667766 899999999999999999999999999999995 88899
Q ss_pred ecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHHH
Q 001949 173 DQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDE 252 (992)
Q Consensus 173 des~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~ 252 (992)
|||.+||||.||.|+++.. ..-+-.||.+++.+.+.++++...+|.+.|+..+++.+++++||-+-.+.-
T Consensus 151 dESAITGESaPViresGgD----------~ssVtGgT~v~SD~l~irita~pG~sFlDrMI~LVEgA~R~KTPNEIAL~i 220 (681)
T COG2216 151 DESAITGESAPVIRESGGD----------FSSVTGGTRVLSDWLKIRITANPGETFLDRMIALVEGAERQKTPNEIALTI 220 (681)
T ss_pred chhhccCCCcceeeccCCC----------cccccCCcEEeeeeEEEEEEcCCCccHHHHHHHHhhchhccCChhHHHHHH
Confidence 9999999999999987521 123789999999999999999999999999999999999999998877765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccc
Q 001949 253 FGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSL 332 (992)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~ 332 (992)
+..-+..+.++.. +.+..+..+.. .+ ...+...++++++.+|-.+.-.++..-..++.|+.+.+++.++.
T Consensus 221 LL~~LTliFL~~~--~Tl~p~a~y~~---g~-----~~~i~~LiALlV~LIPTTIGgLLsAIGIAGMdRv~~~NViA~SG 290 (681)
T COG2216 221 LLSGLTLIFLLAV--ATLYPFAIYSG---GG-----AASVTVLVALLVCLIPTTIGGLLSAIGIAGMDRVTQFNVIATSG 290 (681)
T ss_pred HHHHHHHHHHHHH--HhhhhHHHHcC---CC-----CcCHHHHHHHHHHHhcccHHHHHHHhhhhhhhHhhhhceeecCc
Confidence 4433332222111 11111111111 00 11244567899999999999888888888999999999999999
Q ss_pred cccccccceEEEEecCCCccccCceEEEEEEEeccccCCCceeEEeecCcccCCCCccccCCCccccCCCCchHHHHHHH
Q 001949 333 PSVETLGCTTVICSDKTGTLTTNMMSVAKICVVHSVQQGPIIAEYGVTGTTYAPEGVVFDSSGIQLEFPAQLPCLLHIAR 412 (992)
Q Consensus 333 ~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 412 (992)
.++|.+|.+|++..|||||+|-|+-.-.++.+.++. .. .+++.
T Consensus 291 RAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~gv----------------------------------~~---~~la~ 333 (681)
T COG2216 291 RAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPGV----------------------------------SE---EELAD 333 (681)
T ss_pred chhhhcCCccEEEecccCceeecchhhhheecCCCC----------------------------------CH---HHHHH
Confidence 999999999999999999999998766666554221 12 33444
Q ss_pred HhhhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCcccccccc-EEEeecCCC
Q 001949 413 CSALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFK-KVSILEFSR 491 (992)
Q Consensus 413 ~~~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~F~s 491 (992)
.+.+++-. | ..|.-+++++++++.+.....+ ... ....+||+.
T Consensus 334 aa~lsSl~----D---------eTpEGrSIV~LA~~~~~~~~~~-----------------------~~~~~~~fvpFtA 377 (681)
T COG2216 334 AAQLASLA----D---------ETPEGRSIVELAKKLGIELRED-----------------------DLQSHAEFVPFTA 377 (681)
T ss_pred HHHHhhhc----c---------CCCCcccHHHHHHHhccCCCcc-----------------------cccccceeeecce
Confidence 43333211 1 2455678999999988554211 011 234589999
Q ss_pred CCceEEEEEeeCCeEEEEEeCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccc
Q 001949 492 DRKMMSVLCSHKQMCVMFSKGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQ 571 (992)
Q Consensus 492 ~~k~msviv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~ 571 (992)
+.|++.+-.+++ .-+-|||.+.+.+.-+.. +| ...+.++...++-+. .|-..++++
T Consensus 378 ~TRmSGvd~~~~---~~irKGA~dai~~~v~~~----~g-------~~p~~l~~~~~~vs~-~GGTPL~V~--------- 433 (681)
T COG2216 378 QTRMSGVDLPGG---REIRKGAVDAIRRYVRER----GG-------HIPEDLDAAVDEVSR-LGGTPLVVV--------- 433 (681)
T ss_pred ecccccccCCCC---ceeecccHHHHHHHHHhc----CC-------CCCHHHHHHHHHHHh-cCCCceEEE---------
Confidence 888766655443 456799999999876531 12 112446677777776 777777665
Q ss_pred cCccccCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcC
Q 001949 572 TLSYDDEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEEL 651 (992)
Q Consensus 572 ~~~~~~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~ 651 (992)
.|.+++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|+++
T Consensus 434 -------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVDd------------------ 488 (681)
T COG2216 434 -------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVDD------------------ 488 (681)
T ss_pred -------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCchh------------------
Confidence 5889999999999999999999999999999999999999999999999999987
Q ss_pred CHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCch
Q 001949 652 PAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFA 731 (992)
Q Consensus 652 ~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~ 731 (992)
..+.++|++|.++++.-|.+|+.|+|+|||.||+|+|.+||||+||.+|++.+|+++++|=+|.|..
T Consensus 489 -------------fiAeatPEdK~~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AMNsGTqAAkEAaNMVDLDS~PT 555 (681)
T COG2216 489 -------------FIAEATPEDKLALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVDLDSNPT 555 (681)
T ss_pred -------------hhhcCChHHHHHHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhhccccHHHHHhhcccccCCCcc
Confidence 5677999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001949 732 TIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFV 767 (992)
Q Consensus 732 ~i~~~i~~gR~~~~~i~~~i~~~~~~ni~~~~~~~~ 767 (992)
.+.+.++.|+..+-.--....|++...+.-.+.++-
T Consensus 556 KlievV~IGKqlLiTRGaLTTFSIANDvAKYFaIiP 591 (681)
T COG2216 556 KLIEVVEIGKQLLITRGALTTFSIANDVAKYFAIIP 591 (681)
T ss_pred ceehHhhhhhhheeecccceeeehhhHHHHHHHHHH
Confidence 999999999998877666677777766665544443
No 34
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=100.00 E-value=1.3e-34 Score=305.34 Aligned_cols=228 Identities=32% Similarity=0.526 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceE
Q 001949 93 ILLILAANAAVGVITETNAEKALEELRAYQADI-ATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLR 171 (992)
Q Consensus 93 ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~-~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~ 171 (992)
++++++++.+++.++++|+++..+++++..+++ ++|+|||++++++++||+|||+|+|++||++||||++++ +|.+.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~--~g~~~ 79 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE--SGSAY 79 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE--SSEEE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee--ccccc
Confidence 567778888999999999999999999988887 999999999999999999999999999999999999996 69999
Q ss_pred EecccccCCCcccccccccccccccccCCCCceeeecceEeeceEEEEEEEecccccchhHHHHhccCCCCCCchHHHHH
Q 001949 172 VDQAILTGESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLD 251 (992)
Q Consensus 172 Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~ 251 (992)
||||.+|||+.|+.|.+. ..+.+|++|+||.+.+|.+.++|++||.+|..|++.+...+++.+++++++.++
T Consensus 80 vd~s~ltGes~pv~k~~~--------~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~ 151 (230)
T PF00122_consen 80 VDESALTGESEPVKKTPL--------PLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLN 151 (230)
T ss_dssp EECHHHHSBSSEEEESSS--------CCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHH
T ss_pred cccccccccccccccccc--------cccccchhhccccccccccccccceeeecccccccccccccccccchhhhhhhH
Confidence 999999999999999853 345689999999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhccccccc
Q 001949 252 EFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRS 331 (992)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~ 331 (992)
++..++.+++++++++++++++.... . .++...+..++++++.++|++||+++++++..++++|.++|+++|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~~~~~i~v~~ 224 (230)
T PF00122_consen 152 KIAKILIIIILAIAILVFIIWFFNDS---G----ISFFKSFLFAISLLIVLIPCALPLALPLSLAIAARRLAKNGIIVKN 224 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCHTGST---T----CHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHHHHHHHHTTEEESS
T ss_pred HHHHHHHhcccccchhhhccceeccc---c----cccccccccccceeeeecccceeehHHHHHHHHHHHHHHCCEEEeC
Confidence 99999998888888877766544211 1 1223456778899999999999999999999999999999999999
Q ss_pred cccccc
Q 001949 332 LPSVET 337 (992)
Q Consensus 332 ~~~~e~ 337 (992)
.+++|+
T Consensus 225 ~~a~E~ 230 (230)
T PF00122_consen 225 LSALEA 230 (230)
T ss_dssp TTHHHH
T ss_pred cccccC
Confidence 999984
No 35
>KOG4383 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.96 E-value=4.3e-26 Score=247.12 Aligned_cols=461 Identities=15% Similarity=0.192 Sum_probs=284.6
Q ss_pred eCChHHHHHhhhhccccCCCccccCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCc---------------cc-----
Q 001949 511 KGAPESVLSRCTNILCNDNGFIVPMTANIRAELESRLNSLAGKEALRCLALALKQMPI---------------NR----- 570 (992)
Q Consensus 511 KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~---------------~~----- 570 (992)
-|-.+...+.|+++|++ ..++|++...|.++++...+..- .| +++|||||+... ..
T Consensus 697 ~g~ad~~~eACTdfWdG--adi~PlSg~dkkkV~DFY~Racl-sG-~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI 772 (1354)
T KOG4383|consen 697 FGFADFFEEACTDFWDG--ADIIPLSGRDKKKVKDFYLRACL-SG-HCLAFAYKPCFCALASQLAGKCIELPLNPEHSKI 772 (1354)
T ss_pred ccHHHHHHHHhhhhcCC--ceeeecCcchHHHHHHHHHHHhh-cc-cchheecccHHHHHHHHhCCceEEeccCcccchh
Confidence 36678888999999987 66899999999999888877663 44 699999998430 00
Q ss_pred -------------c-------cCccc------------cCCCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCC
Q 001949 571 -------------Q-------TLSYD------------DEKDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDN 618 (992)
Q Consensus 571 -------------~-------~~~~~------------~e~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~ 618 (992)
+ +..+. .-.+.+|.|++..+.+.+++....|+.|-++.|+.+..|-++
T Consensus 773 ~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 773 ETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKED 852 (1354)
T ss_pred hhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchH
Confidence 0 00000 125788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCcccccccc--------------------------------ccchhhhcCCHH------------
Q 001949 619 KSTAESICHKIGAFDHLVDFVGRS--------------------------------YTASEFEELPAM------------ 654 (992)
Q Consensus 619 ~~~a~~ia~~~gi~~~~~~~~~~~--------------------------------~~~~~~~~~~~~------------ 654 (992)
+...+-+|.++||...+.+..... .+..+.+.+..+
T Consensus 853 ELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ 932 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKM 932 (1354)
T ss_pred HHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccc
Confidence 999999999999998776521100 000000000000
Q ss_pred ----------------------------HHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCH--HHHhhC
Q 001949 655 ----------------------------QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDA--PALKKA 704 (992)
Q Consensus 655 ----------------------------~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~--~~l~~A 704 (992)
+.++...-+-+|.+++|+.-.++++.+|++|++|+++|...|-- -.+-+|
T Consensus 933 dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflka 1012 (1354)
T KOG4383|consen 933 DSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKA 1012 (1354)
T ss_pred ccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEcc
Confidence 00011112347999999999999999999999999999998843 345789
Q ss_pred CeeEEecC-------------CcHH-HHh-----------------ccCeeecCCCchHHHHHHHHHHHHHHHHHHHHHH
Q 001949 705 DIGIAMGS-------------GTAV-AKS-----------------ASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRY 753 (992)
Q Consensus 705 ~vgIa~g~-------------~~~~-~~~-----------------~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~~i~~ 753 (992)
|++||+.. ++.. ..+ ++|+-+......++..+|+.+|.....+|+++.|
T Consensus 1013 dISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLF 1092 (1354)
T KOG4383|consen 1013 DISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLF 1092 (1354)
T ss_pred ceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHH
Confidence 99999831 1111 111 2344444444668888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhhhhhhhhc----cCCCCccccccCCCC-------CCCCccchH
Q 001949 754 MISSNIGEVVCIFVAAVLGIPDTLAPVQLLWVNLVTDGLPATAIG----FNKQDSDVMKAKPRK-------VSEAVVTGW 822 (992)
Q Consensus 754 ~~~~ni~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~l~----~~~~~~~~~~~~P~~-------~~~~~~~~~ 822 (992)
.++..+...+.+++..++.+|..++..+++|.+++-. |.++++ -+++...+.+-.|++ .+..++..+
T Consensus 1093 iLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~--PlL~i~tL~gk~~hkSii~maagKNlqeIPKk~kh~fllcF 1170 (1354)
T KOG4383|consen 1093 ILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCI--PLLFIGTLFGKFEHKSIIIMAAGKNLQEIPKKEKHKFLLCF 1170 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHH--HHHHHHHHhcCCCccceEEeeccCChhhcccHHHHHHHHHH
Confidence 9999999999999999999999999999999998864 555555 233333333333432 222222211
Q ss_pred HHHHHHHHH--HH-HHHHHHh-cCCCCCcccccc---c----c-ccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHH
Q 001949 823 LFFRYLVIG--GF-IWWYVYS-NEGPKLPYSELM---N----F-DSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNA 890 (992)
Q Consensus 823 ~~~~~~~~~--~~-~~~~~~~-~~~~~~~~~~~~---~----~-~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~ 890 (992)
. +.+.... .. .+.|..+ ..+.+..+.+.. + . +....||.+...+ ...+|.+.-.-++...++..
T Consensus 1171 i-lkFsls~ssclIcFgf~L~afcd~~~d~n~~nC~~~m~~S~ddqa~a~Fedfang---L~saQkl~aa~iilH~ifiq 1246 (1354)
T KOG4383|consen 1171 I-LKFSLSASSCLICFGFLLMAFCDLMCDFNDINCLFNMDGSADDQALAEFEDFANG---LGSAQKLLAAEIILHIIFIQ 1246 (1354)
T ss_pred H-HHhhhhHHHHHHHHHHHHHHhhhhhccccccceeeccCCCcCcccchhHHHHHhh---hhhHHHHHHHHHHHHhheeE
Confidence 1 1111101 11 1112221 111111111110 0 0 0011222211100 01234444444555666666
Q ss_pred HhhccCCCcccccCCCcchhhHHHHHHHHHHHHHHH----hc--ccccc-ceecccCChhhHHHHHHHHHHHHHHHHHHH
Q 001949 891 LNNLSENQSLLVIPPWSNLWLVASIILTMFLHILIL----YV--PPLSV-LFSVTPLSWADWTAVFYLSFPVIIIDEVLK 963 (992)
Q Consensus 891 ~~~~~~~~~~~~~~~~~N~~l~~~i~~~~~l~~~~~----~~--p~~~~-~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K 963 (992)
+.+.+..++.++....+|.||-+.+-..+.=+.+++ -+ ...+. -|+....|+.-|++..+...+..+.+|++|
T Consensus 1247 IThih~tkpl~~ks~LsnLWwa~~i~~lLl~a~V~taldlQi~thrd~~VHfgldd~pLL~~~igcisi~iiVitNEiiK 1326 (1354)
T KOG4383|consen 1247 ITHIHCTKPLSFKSGLSNLWWAFPIKCLLLDAAVITALDLQIGTHRDRGVHFGLDDFPLLPLGIGCISICIIVITNEIIK 1326 (1354)
T ss_pred EEEEEEecchhhhcccchheeecccceeehhhHHHHHHhhhhhhccccceeeccccchhHHHHHHHHheeeeeehhhHHH
Confidence 667777777766666667665443322221111111 11 11222 255566677778777777777778899999
Q ss_pred HH-Hhhccchhhhhhcccc
Q 001949 964 FF-SRKSSGMRFKFWFRRH 981 (992)
Q Consensus 964 ~~-~r~~~p~~~~~~~~~~ 981 (992)
.- +|.+.+.+.|+..+++
T Consensus 1327 iheIR~~~R~QkRqK~eFd 1345 (1354)
T KOG4383|consen 1327 IHEIRQFTREQKRQKFEFD 1345 (1354)
T ss_pred HHHHHHHHHHHHhhhheec
Confidence 77 3555455555554443
No 36
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.87 E-value=1e-21 Score=198.86 Aligned_cols=175 Identities=35% Similarity=0.620 Sum_probs=135.4
Q ss_pred CCCchHHHHHHHHHHHhhhhhhhhccCCCCccccccCCCCCCCCccchHHHHHHHHHHH------HHHHHHHhcCCCCCc
Q 001949 774 PDTLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKAKPRKVSEAVVTGWLFFRYLVIGG------FIWWYVYSNEGPKLP 847 (992)
Q Consensus 774 ~~~l~~~~~l~~~~~~~~~p~~~l~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 847 (992)
|.|+++.|+||+|+++|.+|+++++.|++|+++|+||||++++++++++++...+..|. +..|+..... .+
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~---~~ 77 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYI---FG 77 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHS---TC
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhc---cc
Confidence 67999999999999999999999999999999999999999999999998777765662 2222222110 00
Q ss_pred cccccccccCCCCCCCCCCCccCCccchhHHHHHHHHHHHHHHHhhccCCCcccc-cCCCcchhhHHHHHHHHHHHHHHH
Q 001949 848 YSELMNFDSCSTRETTHPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLV-IPPWSNLWLVASIILTMFLHILIL 926 (992)
Q Consensus 848 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~N~~l~~~i~~~~~l~~~~~ 926 (992)
+..... .. +...++|++|++++++|+++.+++|+++.+.+. .+.++|++++++++++++++++++
T Consensus 78 ~~~~~~-----------~~---~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~ 143 (182)
T PF00689_consen 78 WDEETN-----------ND---NLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIV 143 (182)
T ss_dssp SSSHHH-----------TT---CHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHH
T ss_pred cccccc-----------hh---HHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHh
Confidence 000000 00 012469999999999999999999998888887 788899999999999999999999
Q ss_pred hccccccceecccCChhhHHHHHHHHHHHHHHHHHHHHH
Q 001949 927 YVPPLSVLFSVTPLSWADWTAVFYLSFPVIIIDEVLKFF 965 (992)
Q Consensus 927 ~~p~~~~~f~~~~l~~~~w~~~~~~~~~~l~~~ei~K~~ 965 (992)
|+|.++.+|++.++++.+|+++++.+++.++++|++|++
T Consensus 144 ~~P~~~~~f~~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 144 YVPGLNRIFGTAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp HSTTHHHHST----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred cchhhHhhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 999999999999999999999999999999999999985
No 37
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.85 E-value=1.8e-21 Score=203.42 Aligned_cols=97 Identities=48% Similarity=0.769 Sum_probs=92.2
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHH
Q 001949 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (992)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (992)
+..++|.+.+.|++|++++++|+.|+++|++++|+|||+..++..+++++||...
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~~~------------------------- 169 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIFDS------------------------- 169 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSCSE-------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccccc-------------------------
Confidence 7899999999999999999999999999999999999999999999999999553
Q ss_pred hcceeEEeec--ChhhH--HHHHHHHhhcCCEEEEEcCCcCCHHHHhhCC
Q 001949 660 LQHMALFTRV--EPSHK--RMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (992)
Q Consensus 660 ~~~~~v~~r~--~p~~K--~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (992)
.+++++ +|++| .++++.++.+++.|+|+|||.||++|+++||
T Consensus 170 ----~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 170 ----IVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp ----EEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGHHHHHHHSS
T ss_pred ----cccccccccccchhHHHHHHHHhcCCCEEEEEccCHHHHHHHHhCc
Confidence 389999 99999 9999999987779999999999999999997
No 38
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.59 E-value=9e-15 Score=128.17 Aligned_cols=125 Identities=22% Similarity=0.331 Sum_probs=110.3
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHH
Q 001949 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA 659 (992)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (992)
-+...+.++---++-++++++|++|++. +++++.|||..-+....|+-.|+....
T Consensus 18 ~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~r------------------------ 72 (152)
T COG4087 18 AGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVER------------------------ 72 (152)
T ss_pred cceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCceee------------------------
Confidence 3567788888899999999999999999 999999999999999999999987643
Q ss_pred hcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe-c--CCcHHHHhccCeeecCCCchHHHHH
Q 001949 660 LQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-G--SGTAVAKSASDMVLADDNFATIVAA 736 (992)
Q Consensus 660 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~-g--~~~~~~~~~ad~vl~~~~~~~i~~~ 736 (992)
+++-..|+.|.++++.|++.++.|+|+|||.||.+||++||+||+. + +..+.+..+||+++.+ ...++++
T Consensus 73 -----v~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik~--i~e~ldl 145 (152)
T COG4087 73 -----VFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLKE--IAEILDL 145 (152)
T ss_pred -----eecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhhh--HHHHHHH
Confidence 8888999999999999999999999999999999999999999984 4 5667788999999865 4444443
No 39
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.54 E-value=1.1e-14 Score=127.02 Aligned_cols=91 Identities=36% Similarity=0.601 Sum_probs=73.1
Q ss_pred hhccccccccCCCCCCceeccChhHHHHHHHHHHcCCCCCCCchhhhhhhcccccccccCccccccccEEEeecCCCCCc
Q 001949 415 ALCNESVLQYNPDKGNYEKIGEATEVALRVLAEKVGLPGFDSMPSALNMLSKHERASYCNHHWEIEFKKVSILEFSRDRK 494 (992)
Q Consensus 415 ~lc~~~~~~~~~~~~~~~~~~~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~F~s~~k 494 (992)
++||++.+..+++.......|+|+|.||++++++.|.... ....+..+++++.+||+|+||
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~-------------------~~~~~~~~~~~~~~pF~S~rK 61 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID-------------------IKEIRSKYKIVAEIPFDSERK 61 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc-------------------HHHHHhhcceeEEEccCcccc
Confidence 4799888766554444447899999999999999875432 012456899999999999999
Q ss_pred eEEEEEeeCCeEEEEEeCChHHHHHhhhhc
Q 001949 495 MMSVLCSHKQMCVMFSKGAPESVLSRCTNI 524 (992)
Q Consensus 495 ~msviv~~~~~~~~~~KGa~e~il~~c~~~ 524 (992)
||+|++++++.+.+|+|||||.|+++|+++
T Consensus 62 ~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 62 RMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred eeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 999999954567789999999999999763
No 40
>PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A ....
Probab=99.50 E-value=6.6e-14 Score=115.68 Aligned_cols=69 Identities=33% Similarity=0.614 Sum_probs=66.1
Q ss_pred cccCCHHHHHHHhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHH
Q 001949 4 AYARSVVEVLDFFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVIS 72 (992)
Q Consensus 4 ~~~~~~~~~~~~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis 72 (992)
||.++++++++.|+++..+||+++||++|+++||+|+++.+++.++|+.++++|.+|+.+++++++++|
T Consensus 1 w~~~~~~~v~~~l~t~~~~GLs~~ev~~r~~~~G~N~l~~~~~~s~~~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 1 WHQLSVEEVLKRLNTSSSQGLSSEEVEERRKKYGPNELPEPKKKSLWRIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp -TTSSHHHHHHHHTTBTSSBBTHHHHHHHHHHHSSSSTTTTTSSSHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCcCCCCCCCHHHHHHHHHhcccccccccccCcHHHHHHHHHHhHHHHHHHHHHHHC
Confidence 899999999999999999999999999999999999999999999999999999999999999999886
No 41
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.31 E-value=1.8e-11 Score=131.94 Aligned_cols=151 Identities=25% Similarity=0.297 Sum_probs=110.3
Q ss_pred ccCC-CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch---------------------
Q 001949 589 MLDP-PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS--------------------- 646 (992)
Q Consensus 589 ~~d~-~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--------------------- 646 (992)
-.|. +.+.++++|+++++.|++++++|||+...+..+.+++|+..+.+..+|..+...
T Consensus 16 ~~~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~ 95 (264)
T COG0561 16 DSNKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGELLFQKPLSREDVEELLELL 95 (264)
T ss_pred CCCCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHH
Confidence 3444 999999999999999999999999999999999999999875544332111000
Q ss_pred ----------------------------------------hhhcCC----------HHHHHH---Hhc-----ceeEEee
Q 001949 647 ----------------------------------------EFEELP----------AMQQTV---ALQ-----HMALFTR 668 (992)
Q Consensus 647 ----------------------------------------~~~~~~----------~~~~~~---~~~-----~~~v~~r 668 (992)
...... .+.... .+. ....+.+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 175 (264)
T COG0561 96 EDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSS 175 (264)
T ss_pred HhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEE
Confidence 000000 001111 010 1122222
Q ss_pred -------cCh--hhHHHHHHHHhhc-C---CEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHH
Q 001949 669 -------VEP--SHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (992)
Q Consensus 669 -------~~p--~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~ 735 (992)
..| .+|+..++.+.+. | +.|+++||+.||.+||+.|+.||||||+.+.+|+.||+++..++.+++.+
T Consensus 176 s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~ 255 (264)
T COG0561 176 SGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAMGNADEELKELADYVTTSNDEDGVAE 255 (264)
T ss_pred cCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeeccCCCHHHHhhCCcccCCccchHHHH
Confidence 222 3788888888774 3 46999999999999999999999999999999999999999999999999
Q ss_pred HHHH
Q 001949 736 AVAE 739 (992)
Q Consensus 736 ~i~~ 739 (992)
++++
T Consensus 256 ~l~~ 259 (264)
T COG0561 256 ALEK 259 (264)
T ss_pred HHHH
Confidence 9965
No 42
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.29 E-value=2.1e-11 Score=132.00 Aligned_cols=67 Identities=25% Similarity=0.347 Sum_probs=60.3
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHH
Q 001949 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAE 739 (992)
Q Consensus 673 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~ 739 (992)
.|...++.+.+. .+.|+++|||.||.+||+.|++|+||+|+.+.+|+.||+|+.+++.+++..+|++
T Consensus 196 sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEecCccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 677777777664 3679999999999999999999999999999999999999999999999999853
No 43
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.29 E-value=1.8e-11 Score=132.51 Aligned_cols=156 Identities=17% Similarity=0.147 Sum_probs=109.3
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---c-----------
Q 001949 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---A----------- 645 (992)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~---~----------- 645 (992)
|.|++. -...+.+.++++|++++++|++++++|||+...+..+.+++|+..+....+|..+. +
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 455553 13359999999999999999999999999999999999999987553332221110 0
Q ss_pred ------------------------------hh----------------hhcC------------CHHHHH---HHh----
Q 001949 646 ------------------------------SE----------------FEEL------------PAMQQT---VAL---- 660 (992)
Q Consensus 646 ------------------------------~~----------------~~~~------------~~~~~~---~~~---- 660 (992)
.. +..+ ..+... ..+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 00 0000 000000 000
Q ss_pred c-ceeE------EeecChh--hHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCe--ee
Q 001949 661 Q-HMAL------FTRVEPS--HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM--VL 725 (992)
Q Consensus 661 ~-~~~v------~~r~~p~--~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~--vl 725 (992)
. ...+ +...+|. .|...++.+.+. ...|+++|||.||.+||+.|+.||||||+.+.+|++||+ |+
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~Na~~~vK~~A~~~~v~ 246 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIMGNAMPQLRAELPHLPVI 246 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceeccCChHHHHHhCCCCeec
Confidence 0 0111 1123332 588888888765 357999999999999999999999999999999999996 77
Q ss_pred cCCCchHHHHHHH
Q 001949 726 ADDNFATIVAAVA 738 (992)
Q Consensus 726 ~~~~~~~i~~~i~ 738 (992)
.+++.+++..+|+
T Consensus 247 ~~n~edGva~~l~ 259 (272)
T PRK15126 247 GHCRNQAVSHYLT 259 (272)
T ss_pred CCCcchHHHHHHH
Confidence 7899999999884
No 44
>PRK10976 putative hydrolase; Provisional
Probab=99.28 E-value=2.7e-11 Score=130.75 Aligned_cols=148 Identities=18% Similarity=0.189 Sum_probs=104.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc---chhh--hcC--------------
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT---ASEF--EEL-------------- 651 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~---~~~~--~~~-------------- 651 (992)
..+.+.+.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+. +..+ ..+
T Consensus 18 ~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~ 97 (266)
T PRK10976 18 HTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHD 97 (266)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhcc
Confidence 358999999999999999999999999999999999999987553332221110 0000 000
Q ss_pred -------------------------------------------------------CHHHHH---HHhc-----ceeE---
Q 001949 652 -------------------------------------------------------PAMQQT---VALQ-----HMAL--- 665 (992)
Q Consensus 652 -------------------------------------------------------~~~~~~---~~~~-----~~~v--- 665 (992)
..++.. ..+. ...+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 177 (266)
T PRK10976 98 NPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFS 177 (266)
T ss_pred cCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEe
Confidence 000000 0000 0111
Q ss_pred ---EeecCh--hhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccC--eeecCCCchHHH
Q 001949 666 ---FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD--MVLADDNFATIV 734 (992)
Q Consensus 666 ---~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad--~vl~~~~~~~i~ 734 (992)
+....| ..|...++.+.+. .+.|+++|||.||.+||+.|+.||||+|+.+.+|+.|| .|+.+++.+++.
T Consensus 178 ~~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa 257 (266)
T PRK10976 178 TLTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIMGNAHQRLKDLLPELEVIGSNADDAVP 257 (266)
T ss_pred CCceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeeecCCcHHHHHhCCCCeecccCchHHHH
Confidence 112222 2577777777654 36799999999999999999999999999999999988 788899999999
Q ss_pred HHHH
Q 001949 735 AAVA 738 (992)
Q Consensus 735 ~~i~ 738 (992)
.+++
T Consensus 258 ~~l~ 261 (266)
T PRK10976 258 HYLR 261 (266)
T ss_pred HHHH
Confidence 9985
No 45
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.28 E-value=2.1e-11 Score=128.65 Aligned_cols=149 Identities=21% Similarity=0.260 Sum_probs=108.1
Q ss_pred cCC-CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-c---chhh-----h----------
Q 001949 590 LDP-PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-T---ASEF-----E---------- 649 (992)
Q Consensus 590 ~d~-~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~---~~~~-----~---------- 649 (992)
.|. +.+.+.++|++++++|++++++|||+...+..+++++|+..+....+|..+ . +..+ +
T Consensus 17 ~~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 17 KDRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred CCCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 344 889999999999999999999999999999999999998765443333211 0 0000 0
Q ss_pred --------------------------cCCHHHHHHHhcc----eeE-----EeecChh--hHHHHHHHHhhc----CCEE
Q 001949 650 --------------------------ELPAMQQTVALQH----MAL-----FTRVEPS--HKRMLVEALQNQ----NEVV 688 (992)
Q Consensus 650 --------------------------~~~~~~~~~~~~~----~~v-----~~r~~p~--~K~~iv~~l~~~----~~~v 688 (992)
....++....+.+ ..+ +....|. .|...++.+.+. ...+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~ 176 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEV 176 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHE
Confidence 0000111111111 111 1123332 488888777664 4579
Q ss_pred EEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHH
Q 001949 689 AMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (992)
Q Consensus 689 ~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~ 738 (992)
+++||+.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.+++.++++
T Consensus 177 i~~GD~~NDi~m~~~ag~~vam~Na~~~vk~~a~~v~~~n~~~Gv~~~l~ 226 (230)
T PRK01158 177 AAIGDSENDLEMFEVAGFGVAVANADEELKEAADYVTEKSYGEGVAEAIE 226 (230)
T ss_pred EEECCchhhHHHHHhcCceEEecCccHHHHHhcceEecCCCcChHHHHHH
Confidence 99999999999999999999999999999999999999999999999885
No 46
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.24 E-value=3.4e-11 Score=125.41 Aligned_cols=146 Identities=21% Similarity=0.230 Sum_probs=105.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch--hh--hcCC---------------
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS--EF--EELP--------------- 652 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~--~~--~~~~--------------- 652 (992)
++.+++.++|++|+++|++++++|||+...+..+++++++..+....+|..+... .+ ....
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4899999999999999999999999999999999999998765554443222110 00 0000
Q ss_pred --------------------HHHHHHHhcc--eeE-----Eeec--ChhhHHHHHHHHhhc----CCEEEEEcCCcCCHH
Q 001949 653 --------------------AMQQTVALQH--MAL-----FTRV--EPSHKRMLVEALQNQ----NEVVAMTGDGVNDAP 699 (992)
Q Consensus 653 --------------------~~~~~~~~~~--~~v-----~~r~--~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~ 699 (992)
.+.....+.. ..+ +... ....|...++.+.+. ...++++||+.||.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~ND~~ 177 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSENDID 177 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHH
Confidence 0000101110 111 1122 234788888887664 346999999999999
Q ss_pred HHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHH
Q 001949 700 ALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 700 ~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
|++.|++|+||+|+.+.+|+.||+++.+++.+++.+++
T Consensus 178 ml~~ag~~vam~na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 178 LFRVVGFKVAVANADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCCCeEEcCCccHHHHHhCCEEcCCCCCchhhhhC
Confidence 99999999999999999999999999988888887653
No 47
>PLN02887 hydrolase family protein
Probab=99.19 E-value=1.4e-10 Score=135.03 Aligned_cols=66 Identities=26% Similarity=0.395 Sum_probs=58.9
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHH
Q 001949 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (992)
Q Consensus 673 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~ 738 (992)
.|...++.+.+. .+.|+++|||.||.+||+.|++||||||+.+.+|+.||+|+.+++.++|..+|+
T Consensus 507 SKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLe 576 (580)
T PLN02887 507 SKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVALSNGAEKTKAVADVIGVSNDEDGVADAIY 576 (580)
T ss_pred CHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHH
Confidence 566666666654 357999999999999999999999999999999999999999999999999985
No 48
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.19 E-value=1.6e-10 Score=121.40 Aligned_cols=147 Identities=19% Similarity=0.228 Sum_probs=104.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cchh-----hhcCC-------------
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TASE-----FEELP------------- 652 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~~-----~~~~~------------- 652 (992)
.+.+.+.++|++++++|++++++|||+...+..+++++|+..+....+|..+ .... ...+.
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIAKTF 94 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEEecccCHHHHHHHHHhccc
Confidence 4889999999999999999999999999999999999997655443333211 0000 00000
Q ss_pred -----------------------HHHHHHHhcc----eeE-----EeecCh--hhHHHHHHHHhhc----CCEEEEEcCC
Q 001949 653 -----------------------AMQQTVALQH----MAL-----FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDG 694 (992)
Q Consensus 653 -----------------------~~~~~~~~~~----~~v-----~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg 694 (992)
.+........ ..+ +....| ..|...++.+.+. .+.|+++||+
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~~GD~ 174 (225)
T TIGR01482 95 PFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGETLVCGDS 174 (225)
T ss_pred chhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHEEEECCC
Confidence 0000111110 011 112222 3788888877664 3679999999
Q ss_pred cCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchH----HHHHHH
Q 001949 695 VNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT----IVAAVA 738 (992)
Q Consensus 695 ~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~----i~~~i~ 738 (992)
.||.+|++.|++|+||+|+.+.+|+.||+|+.+++.++ +...++
T Consensus 175 ~NDi~m~~~ag~~vam~Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 175 ENDIDLFEVPGFGVAVANAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred HhhHHHHHhcCceEEcCChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999 666663
No 49
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.17 E-value=1.7e-10 Score=123.66 Aligned_cols=148 Identities=20% Similarity=0.251 Sum_probs=106.4
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc-cch--hh--hcC-------------
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY-TAS--EF--EEL------------- 651 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~-~~~--~~--~~~------------- 651 (992)
...+.+++.++|++++++|++++++|||....+..+.+++++..+.+..+|..+ ... .+ ..+
T Consensus 13 ~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~ 92 (254)
T PF08282_consen 13 DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYEKPIDSDDVKKILKYLK 92 (254)
T ss_dssp TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHHHH
T ss_pred CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchhhheeccchhheeehhh
Confidence 345889999999999999999999999999999999999998855444333222 000 00 000
Q ss_pred --------------------------------------------------------CHHHH-------HHHhcceeEEe-
Q 001949 652 --------------------------------------------------------PAMQQ-------TVALQHMALFT- 667 (992)
Q Consensus 652 --------------------------------------------------------~~~~~-------~~~~~~~~v~~- 667 (992)
..+.. .........+.
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 172 (254)
T PF08282_consen 93 EHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDVVR 172 (254)
T ss_dssp HTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred hcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeEEE
Confidence 00110 11111100111
Q ss_pred ------ecCh--hhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHH
Q 001949 668 ------RVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (992)
Q Consensus 668 ------r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~ 735 (992)
..+| ..|...++.+.+. .+.++++||+.||.+||+.|+.|+||+++++.+++.||+++...+-+++++
T Consensus 173 ~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~na~~~~k~~a~~i~~~~~~~gv~~ 252 (254)
T PF08282_consen 173 SSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAMGNATPELKKAADYITPSNNDDGVAK 252 (254)
T ss_dssp EETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEETTS-HHHHHHSSEEESSGTCTHHHH
T ss_pred ecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEEcCCCHHHHHhCCEEecCCCCChHHH
Confidence 2222 4788888888763 468999999999999999999999999999999999999998888899987
Q ss_pred HH
Q 001949 736 AV 737 (992)
Q Consensus 736 ~i 737 (992)
+|
T Consensus 253 ~i 254 (254)
T PF08282_consen 253 AI 254 (254)
T ss_dssp HH
T ss_pred hC
Confidence 65
No 50
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.15 E-value=2.3e-10 Score=124.18 Aligned_cols=66 Identities=26% Similarity=0.396 Sum_probs=58.2
Q ss_pred hHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHH
Q 001949 673 HKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (992)
Q Consensus 673 ~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~ 738 (992)
.|...++.+.++ .+.|+++||+.||.+|++.|++|++||++.+.+|+.||+++.+++.+++..+++
T Consensus 199 ~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAMGNADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEecCchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 566666666543 357999999999999999999999999999999999999999999999999985
No 51
>smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322.
Probab=99.14 E-value=1.1e-10 Score=95.12 Aligned_cols=61 Identities=36% Similarity=0.518 Sum_probs=57.2
Q ss_pred HhCCCCCCCCCHHHHHHHHhhcCCCCCCCCcCccHHHHHHHHhhhhHHHHHHHHHHHHHHH
Q 001949 15 FFGVDPTKGLTDSQVARHVRIYGKNVLPQEKRTAFWKLVLKQFDDLLVKILIAAAVISFFL 75 (992)
Q Consensus 15 ~l~~~~~~GL~~~~~~~r~~~~G~N~i~~~~~~~~~~~l~~~f~~~~~~~l~~~~iis~~~ 75 (992)
.|++++..||+++||++|+++||+|+++.++++++|+.++++|.+|+.+++++++++++++
T Consensus 2 ~l~~~~~~GLs~~~v~~r~~~~G~N~l~~~~~~s~~~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 2 RLQTSLESGLSSEEAARRLERYGPNELPPPKKRSPLLRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred CCCCCcccCCCHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 4788888899999999999999999999988889999999999999999999999999875
No 52
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.08 E-value=6.2e-10 Score=121.19 Aligned_cols=129 Identities=17% Similarity=0.282 Sum_probs=101.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc---cccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+.....+ ..+..+++..... -
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg~v~g~-----------------i 243 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTGNVLGD-----------------I 243 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEeEecCc-----------------c
Confidence 5899999999999999999999999998888999999998642211 0011111110000 0
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHH
Q 001949 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVA 738 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~ 738 (992)
+..+.|.+.++.+.++ .+.|+++|||.||.+|++.||+|||| ++.+.+++.||.++...++++++.++.
T Consensus 244 v~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 244 VDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred CCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 2345788888887654 46899999999999999999999999 899999999999999999999987763
No 53
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.06 E-value=1.8e-09 Score=115.56 Aligned_cols=147 Identities=20% Similarity=0.184 Sum_probs=100.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc-h--h------h--hcCCHHHH-----
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA-S--E------F--EELPAMQQ----- 656 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~--~------~--~~~~~~~~----- 656 (992)
..+.+.++|++|+++|++++++|||....+..+.+++|+..+.+..+|..+.. . . + ..++.+..
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 45579999999999999999999999999999999999875554444322110 0 0 0 00000000
Q ss_pred ------------------------------------------------------HHHhcc--eeE-----EeecCh--hh
Q 001949 657 ------------------------------------------------------TVALQH--MAL-----FTRVEP--SH 673 (992)
Q Consensus 657 ------------------------------------------------------~~~~~~--~~v-----~~r~~p--~~ 673 (992)
...+.+ ..+ +....| ..
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ei~~~~~~ 176 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVELGLEVTHGNRFYHVLGAGSD 176 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHcCCEEEeCCceEEEecCCCC
Confidence 000000 010 111111 35
Q ss_pred HHHHHHHHhhc------CCEEEEEcCCcCCHHHHhhCCeeEEecCCc---HHHHhc--c-CeeecCCCchHHHHHHHH
Q 001949 674 KRMLVEALQNQ------NEVVAMTGDGVNDAPALKKADIGIAMGSGT---AVAKSA--S-DMVLADDNFATIVAAVAE 739 (992)
Q Consensus 674 K~~iv~~l~~~------~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~---~~~~~~--a-d~vl~~~~~~~i~~~i~~ 739 (992)
|...++.+.+. .+.|+++||+.||.+|++.|++||||+|+. +.+|+. | ++|+.+++.+++.+++++
T Consensus 177 Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~ 254 (256)
T TIGR01486 177 KGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEH 254 (256)
T ss_pred HHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHH
Confidence 66666666543 567999999999999999999999999987 478886 4 599999999999999864
No 54
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.01 E-value=1.8e-09 Score=110.12 Aligned_cols=127 Identities=15% Similarity=0.116 Sum_probs=97.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc---ccc-ccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---FVG-RSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
++.|++.+.|+.+|+.| +++++||.....+..+++++|+...... ..+ ..++|. ..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~tG~------------------~~- 127 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVVGY------------------QL- 127 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeECe------------------ee-
Confidence 68999999999999986 9999999999999999999999753211 000 111111 01
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHH
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEG 740 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~g 740 (992)
..+..|...++.+++.+..++++|||.||.+|++.||+||++. +.+..+++||-.-.-.+++.+...+.++
T Consensus 128 -~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~-ak~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (203)
T TIGR02137 128 -RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFH-APENVIREFPQFPAVHTYEDLKREFLKA 198 (203)
T ss_pred -cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEec-CCHHHHHhCCCCCcccCHHHHHHHHHHH
Confidence 3467899999999888889999999999999999999999996 4555555555555555777888777665
No 55
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.00 E-value=4.3e-09 Score=113.63 Aligned_cols=157 Identities=15% Similarity=0.105 Sum_probs=103.4
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC-Ccccccccccc-chh--------h
Q 001949 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYT-ASE--------F 648 (992)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~-~~~--------~ 648 (992)
-|.|++. =...+.+.++++|++|+++|++++++|||....+..+++++|+.. +.+..+|..+. ... +
T Consensus 14 lDGTLL~---~~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~ 90 (271)
T PRK03669 14 LDGTLLD---SHTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPR 90 (271)
T ss_pred CccCCcC---CCCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceE
Confidence 3555553 123466889999999999999999999999999999999999852 33333332211 000 0
Q ss_pred --hcCCHH----------------------------------------------------------HH---HHHhc--ce
Q 001949 649 --EELPAM----------------------------------------------------------QQ---TVALQ--HM 663 (992)
Q Consensus 649 --~~~~~~----------------------------------------------------------~~---~~~~~--~~ 663 (992)
..++.+ .. ...+. ..
T Consensus 91 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 170 (271)
T PRK03669 91 IISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGL 170 (271)
T ss_pred eecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCC
Confidence 000000 00 00000 01
Q ss_pred eE-----EeecCh--hhHHHHHHHHhh-------cCCEEEEEcCCcCCHHHHhhCCeeEEecCCc-HH-----HHhccCe
Q 001949 664 AL-----FTRVEP--SHKRMLVEALQN-------QNEVVAMTGDGVNDAPALKKADIGIAMGSGT-AV-----AKSASDM 723 (992)
Q Consensus 664 ~v-----~~r~~p--~~K~~iv~~l~~-------~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~-~~-----~~~~ad~ 723 (992)
.+ +....| ..|...++.+.+ ....|+++|||.||.+||+.|++|||||++. +. .+..+|+
T Consensus 171 ~~~~~~~~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~~~~~~~~~l~~~~~~~~~ 250 (271)
T PRK03669 171 QFVQGARFWHVLDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVKGLNREGVHLQDDDPARVY 250 (271)
T ss_pred EEEecCeeEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEecCCCCCCcccccccCCceE
Confidence 11 112222 367776666655 3467999999999999999999999999555 21 4557999
Q ss_pred eecCCCchHHHHHHH
Q 001949 724 VLADDNFATIVAAVA 738 (992)
Q Consensus 724 vl~~~~~~~i~~~i~ 738 (992)
++...+-+++.++++
T Consensus 251 ~~~~~~~~g~~~~l~ 265 (271)
T PRK03669 251 RTQREGPEGWREGLD 265 (271)
T ss_pred eccCCCcHHHHHHHH
Confidence 999999999999885
No 56
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.00 E-value=1.6e-09 Score=106.28 Aligned_cols=106 Identities=15% Similarity=0.216 Sum_probs=86.2
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHH
Q 001949 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (992)
Q Consensus 599 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 678 (992)
.+|+.|+++|+++.++|+.+...+....+.+|+...... ..-.|+....++
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~f~~-----------------------------~kpkp~~~~~~~ 91 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRFHEG-----------------------------IKKKTEPYAQML 91 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEEEec-----------------------------CCCCHHHHHHHH
Confidence 579999999999999999999999999999999752210 012344445555
Q ss_pred HHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHH
Q 001949 679 EALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATI 733 (992)
Q Consensus 679 ~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i 733 (992)
+.++-..+.++++||+.||.+|++.|++++||+++.+.+++.|++|+..++-.+.
T Consensus 92 ~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 92 EEMNISDAEVCYVGDDLVDLSMMKRVGLAVAVGDAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred HHcCcCHHHEEEECCCHHHHHHHHHCCCeEECcCchHHHHHhCCEEcCCCCCCCH
Confidence 5555456789999999999999999999999999999999999999876665544
No 57
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.00 E-value=1.8e-09 Score=115.88 Aligned_cols=146 Identities=23% Similarity=0.327 Sum_probs=103.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc----------------------------
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY---------------------------- 643 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~---------------------------- 643 (992)
++.+++.++|++++++|++++++|||+...+..+.+++|+..+.+..+|..+
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~~~~~ 95 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNFLKKH 95 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHHHHHc
Confidence 5889999999999999999999999999999999999998744333221100
Q ss_pred --------------cch--h-h--------------hcC---------------CHH---HHHHHhc------ceeE---
Q 001949 644 --------------TAS--E-F--------------EEL---------------PAM---QQTVALQ------HMAL--- 665 (992)
Q Consensus 644 --------------~~~--~-~--------------~~~---------------~~~---~~~~~~~------~~~v--- 665 (992)
... . + ... ..+ +....+. ...+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 175 (256)
T TIGR00099 96 GLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVSS 175 (256)
T ss_pred CcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEEe
Confidence 000 0 0 000 000 0001111 1111
Q ss_pred ---EeecCh--hhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHH
Q 001949 666 ---FTRVEP--SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (992)
Q Consensus 666 ---~~r~~p--~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~ 736 (992)
+....| ..|...++.+.+. .+.++++||+.||.+|++.|++|+||+++.+.+|+.||+++.+++.+++..+
T Consensus 176 ~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 176 GPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred cCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 112233 3688888888764 3589999999999999999999999999999999999999999998888765
Q ss_pred H
Q 001949 737 V 737 (992)
Q Consensus 737 i 737 (992)
|
T Consensus 256 l 256 (256)
T TIGR00099 256 L 256 (256)
T ss_pred C
Confidence 3
No 58
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=98.93 E-value=4.4e-09 Score=102.58 Aligned_cols=110 Identities=19% Similarity=0.265 Sum_probs=84.5
Q ss_pred HHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHHH
Q 001949 600 AMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVE 679 (992)
Q Consensus 600 ~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~ 679 (992)
+|++|+++|+++.++||+....+..+.+++|+..... + ....|+-..++++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~~~--------~---------------------~~~k~~~~~~~~~ 86 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHLYQ--------G---------------------QSNKLIAFSDILE 86 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEEEe--------c---------------------ccchHHHHHHHHH
Confidence 8999999999999999999999999999999875210 0 0011222233333
Q ss_pred HHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchH-HHHHHH
Q 001949 680 ALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFAT-IVAAVA 738 (992)
Q Consensus 680 ~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~-i~~~i~ 738 (992)
.+.-..+.++++||+.||.+|++.|+++++|.++.+..+..||+++..+.-.+ +.++++
T Consensus 87 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~ 146 (154)
T TIGR01670 87 KLALAPENVAYIGDDLIDWPVMEKVGLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCE 146 (154)
T ss_pred HcCCCHHHEEEECCCHHHHHHHHHCCCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHH
Confidence 33334578999999999999999999999999998999999999998765444 665553
No 59
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.86 E-value=2.5e-08 Score=107.81 Aligned_cols=149 Identities=20% Similarity=0.211 Sum_probs=102.7
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc-hh----------------hh--c
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA-SE----------------FE--E 650 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~----------------~~--~ 650 (992)
.+.+.+++.++|++|+++|++++++||+....+..+++++|+..+....+|..+.. .. +. .
T Consensus 19 ~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (273)
T PRK00192 19 HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELG 98 (273)
T ss_pred CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcC
Confidence 34577889999999999999999999999999999999999876555444432210 00 00 0
Q ss_pred CCHHHH-------------------------------------HHH------------------------hc--ceeE--
Q 001949 651 LPAMQQ-------------------------------------TVA------------------------LQ--HMAL-- 665 (992)
Q Consensus 651 ~~~~~~-------------------------------------~~~------------------------~~--~~~v-- 665 (992)
++.+.. ... +. ...+
T Consensus 99 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 178 (273)
T PRK00192 99 PPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKRLGLKVTR 178 (273)
T ss_pred CCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHHcCCEEEE
Confidence 000000 000 00 0000
Q ss_pred ---EeecC-hhhHHHHHHHHhh----cC-CEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHH----hcc-Ceee--cCCC
Q 001949 666 ---FTRVE-PSHKRMLVEALQN----QN-EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAK----SAS-DMVL--ADDN 729 (992)
Q Consensus 666 ---~~r~~-p~~K~~iv~~l~~----~~-~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~----~~a-d~vl--~~~~ 729 (992)
+.... +..|...++.+.+ .. +.|+++||+.||.+|++.|++|++|+|+.+.+| .+| +.+. ..++
T Consensus 179 ~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~ 258 (273)
T PRK00192 179 GGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVVPGPDGPNPPLLPGIADGEFILASAPG 258 (273)
T ss_pred CCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEeCCCCCCCcccCccccCCceEEecCCC
Confidence 00111 1167666666654 35 899999999999999999999999999999999 666 6777 5777
Q ss_pred chHHHHHHH
Q 001949 730 FATIVAAVA 738 (992)
Q Consensus 730 ~~~i~~~i~ 738 (992)
-+++.++++
T Consensus 259 ~~Gv~~~l~ 267 (273)
T PRK00192 259 PEGWAEAIN 267 (273)
T ss_pred cHHHHHHHH
Confidence 889998885
No 60
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.83 E-value=1.4e-08 Score=103.90 Aligned_cols=117 Identities=18% Similarity=0.229 Sum_probs=88.5
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.++.|++.+.++.++++|.+++++||-...-+..+|+++|++...... .+..++|. +..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG~------------------v~g 137 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTGR------------------VVG 137 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEece------------------eee
Confidence 789999999999999999999999999999999999999998654221 00122332 222
Q ss_pred -ecChhhHHHHHHHHhhc-C---CEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeec
Q 001949 668 -RVEPSHKRMLVEALQNQ-N---EVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLA 726 (992)
Q Consensus 668 -r~~p~~K~~iv~~l~~~-~---~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~ 726 (992)
.+..+.|...++.+.+. | +.+.++|||.||.|||+.||.+++++. ....+..|+....
T Consensus 138 ~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n~-~~~l~~~a~~~~~ 200 (212)
T COG0560 138 PICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNP-KPKLRALADVRIW 200 (212)
T ss_pred eecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCeEeCc-CHHHHHHHHHhcC
Confidence 24457888888666653 4 469999999999999999999999963 3444555555443
No 61
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=98.78 E-value=4e-08 Score=103.89 Aligned_cols=143 Identities=17% Similarity=0.233 Sum_probs=97.3
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC--ccccccccc-cc------hh----h-------------h
Q 001949 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSY-TA------SE----F-------------E 649 (992)
Q Consensus 596 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~-~~------~~----~-------------~ 649 (992)
+..++++ ++++|++++++|||....+..+.+++++..+ .+..+|..+ .. .. + .
T Consensus 19 ~~~~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (236)
T TIGR02471 19 SFVELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA 97 (236)
T ss_pred HHHHHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh
Confidence 3346666 6999999999999999999999999998543 233232211 00 00 0 0
Q ss_pred cCC--------------------H------HHHHHHhc----cee-EEe-----ecCh--hhHHHHHHHHhhc----CCE
Q 001949 650 ELP--------------------A------MQQTVALQ----HMA-LFT-----RVEP--SHKRMLVEALQNQ----NEV 687 (992)
Q Consensus 650 ~~~--------------------~------~~~~~~~~----~~~-v~~-----r~~p--~~K~~iv~~l~~~----~~~ 687 (992)
.++ . ++....+. ... +++ ...| ..|...++.+.++ ...
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~ 177 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQ 177 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 000 0 00011111 011 111 2233 3688888887664 236
Q ss_pred EEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccC----eeecCCCchHHHHHHHH
Q 001949 688 VAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD----MVLADDNFATIVAAVAE 739 (992)
Q Consensus 688 v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad----~vl~~~~~~~i~~~i~~ 739 (992)
++++||+.||.+|++.|++||+|+|+.+.+|+.|| +|...++-.++.++|++
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav~na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVVGNHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEEcCCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 89999999999999999999999999999999999 88888888999999864
No 62
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.76 E-value=2.5e-08 Score=104.25 Aligned_cols=126 Identities=22% Similarity=0.300 Sum_probs=93.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccc---ccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDF---VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+....... .+..+++. +..+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~------------------~~~~ 146 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTGL------------------VEGP 146 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEEE------------------ecCc
Confidence 58999999999999999999999999999999999999987532110 00000000 0111
Q ss_pred -cChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHH
Q 001949 669 -VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAA 736 (992)
Q Consensus 669 -~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~ 736 (992)
..+..|..+++.+.++ .+.++++||+.+|.+|++.||++++++ +.+..+++||+++.+.++..+..+
T Consensus 147 ~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~-~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 147 IVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGIAFN-AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred ccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeEEeC-CCHHHHHhchhccCCCCHHHHHhh
Confidence 1123366666655443 357999999999999999999999985 568888999999999998777653
No 63
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.71 E-value=3.9e-08 Score=90.47 Aligned_cols=114 Identities=20% Similarity=0.341 Sum_probs=92.0
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHH
Q 001949 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (992)
Q Consensus 599 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 678 (992)
-.|+.+.++||++.++||++...++.-|+++||..-. .--++|....
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~~~---------------------------------qG~~dK~~a~ 88 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKHLY---------------------------------QGISDKLAAF 88 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCceee---------------------------------echHhHHHHH
Confidence 4689999999999999999999999999999997522 2236777777
Q ss_pred HHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCC----chHHHHHHHHHHHHHH
Q 001949 679 EALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN----FATIVAAVAEGRAIYN 745 (992)
Q Consensus 679 ~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~----~~~i~~~i~~gR~~~~ 745 (992)
+.+.++ .+.|+++||..||.|+|+..++++|+.++.+..++.||+|+.... ...+.++|-.++..++
T Consensus 89 ~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~~~d 163 (170)
T COG1778 89 EELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQGKLD 163 (170)
T ss_pred HHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccccccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccCcHH
Confidence 666554 568999999999999999999999999999999999999997554 3344455545544443
No 64
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.70 E-value=5.9e-08 Score=97.71 Aligned_cols=98 Identities=22% Similarity=0.316 Sum_probs=79.7
Q ss_pred HHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhHHHHH
Q 001949 599 NAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHKRMLV 678 (992)
Q Consensus 599 ~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv 678 (992)
.+|+.|+++|+++.++||+....+..+++++|+.... . ..+.|...+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~f-------------------------------~--g~~~k~~~l 101 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHLY-------------------------------Q--GQSNKLIAF 101 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCceee-------------------------------c--CCCcHHHHH
Confidence 6899999999999999999999999999999986521 1 123344444
Q ss_pred HHHhh----cCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCC
Q 001949 679 EALQN----QNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729 (992)
Q Consensus 679 ~~l~~----~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~ 729 (992)
+.+.+ ....|++|||+.||.+|++.|+++++++++.+..+..||+++....
T Consensus 102 ~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~~~~~~~~~~a~~v~~~~~ 156 (183)
T PRK09484 102 SDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAVADAHPLLLPRADYVTRIAG 156 (183)
T ss_pred HHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEecCChhHHHHHhCCEEecCCC
Confidence 44433 3468999999999999999999999999888899999999996544
No 65
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.55 E-value=6.1e-07 Score=95.61 Aligned_cols=150 Identities=16% Similarity=0.155 Sum_probs=103.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC--cccccccccc-ch-------------------h
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH--LVDFVGRSYT-AS-------------------E 647 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~--~~~~~~~~~~-~~-------------------~ 647 (992)
..+..|.+.+++++++++|+.++++|||.......+.+++++..+ .+..+|..+. +. .
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~ 98 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDI 98 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHH
Confidence 456789999999999999999999999999999999999998765 2222221110 00 0
Q ss_pred h-------hcC-----------------CHHH----H---HHHhc----ceeE-Ee-----ecCh--hhHHHHHHHHhhc
Q 001949 648 F-------EEL-----------------PAMQ----Q---TVALQ----HMAL-FT-----RVEP--SHKRMLVEALQNQ 684 (992)
Q Consensus 648 ~-------~~~-----------------~~~~----~---~~~~~----~~~v-~~-----r~~p--~~K~~iv~~l~~~ 684 (992)
+ ..+ ..+. . ...+. ++.+ .+ ...| ..|...++.+.+.
T Consensus 99 ~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~ 178 (249)
T TIGR01485 99 VVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQK 178 (249)
T ss_pred HHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHH
Confidence 0 000 0000 0 11111 1111 11 2233 4788888888664
Q ss_pred ----CCEEEEEcCCcCCHHHHhh-CCeeEEecCCcHHHHhccC-------eeecCCCchHHHHHHHH
Q 001949 685 ----NEVVAMTGDGVNDAPALKK-ADIGIAMGSGTAVAKSASD-------MVLADDNFATIVAAVAE 739 (992)
Q Consensus 685 ----~~~v~~iGDg~ND~~~l~~-A~vgIa~g~~~~~~~~~ad-------~vl~~~~~~~i~~~i~~ 739 (992)
...|+++||+.||.+|++. ++.||+|+|+.+.+|+.++ ++.....-+++.+++++
T Consensus 179 ~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 179 LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVSNAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred cCCCccCEEEEECChhHHHHHHccCCcEEEECCCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 4689999999999999998 6799999999999987554 66677777888888753
No 66
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.48 E-value=6.8e-07 Score=92.36 Aligned_cols=125 Identities=18% Similarity=0.231 Sum_probs=89.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe--ec
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT--RV 669 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--r~ 669 (992)
++.|++.+.++.|+++ +++.++|+.....+..+.+++|+...... ......+. .+.. ..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~----------------~i~~~~~~ 128 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG----------------MITGYDLR 128 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC----------------eEECcccc
Confidence 4679999999999999 99999999999999999999998642211 00000000 0000 02
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCe-eecCCCchHHHHHH
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDM-VLADDNFATIVAAV 737 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~-vl~~~~~~~i~~~i 737 (992)
.|+.|...++.++..+..++|+|||.||.+|.++|++|+..+.........++. ++ +++..+...+
T Consensus 129 ~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~~~~~~~~~~~~~~~--~~~~el~~~l 195 (205)
T PRK13582 129 QPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRPPANVIAEFPQFPAV--HTYDELLAAI 195 (205)
T ss_pred ccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECCCHHHHHhCCccccc--CCHHHHHHHH
Confidence 467888999999888899999999999999999999999887544444445555 33 2455555444
No 67
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.46 E-value=1.1e-07 Score=90.36 Aligned_cols=109 Identities=16% Similarity=0.263 Sum_probs=78.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccc-hhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTA-SEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+.|++++.++.||+.|.+++++||.-...+..+|.++||+..+...+...++. .++......+ -. +.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gfd~~~---------pt--sd 156 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGFDTNE---------PT--SD 156 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCcccccccCC---------cc--cc
Confidence 478999999999999999999999999999999999999987443221111100 0000000000 00 12
Q ss_pred hhhHHHHHHHHhhc--CCEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 671 PSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 671 p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
...|.++++.+++. -+.++|||||.||.+|+..||.=|+.|
T Consensus 157 sggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred CCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 34789999998885 568999999999999999977766665
No 68
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.44 E-value=8.4e-07 Score=91.39 Aligned_cols=117 Identities=21% Similarity=0.228 Sum_probs=82.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
+++|++.+.++.|+++|+++.++|+.....+..+++.+|+...... .+..++..... ...+....|
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~----~~~~~~~g~~~----------p~~~~~~~~ 145 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN----ELVFDEKGFIQ----------PDGIVRVTF 145 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE----EEEEcCCCeEe----------cceeeEEcc
Confidence 5899999999999999999999999999999999999997642110 11000000000 001112345
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccC
Q 001949 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASD 722 (992)
Q Consensus 672 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad 722 (992)
..|..+++.+.++ .+.++++||+.||.+|++.||++++++......+.++|
T Consensus 146 ~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~~~~~~~~~a~~ 200 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISISLGDEGHADYLAKD 200 (201)
T ss_pred ccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEEECCCccchhhccc
Confidence 6677777666443 45799999999999999999999999865555555554
No 69
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.39 E-value=1.5e-06 Score=90.57 Aligned_cols=50 Identities=10% Similarity=0.117 Sum_probs=42.7
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccc
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV 639 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~ 639 (992)
.+...+++.++|++|+++|++++++|||+...+..+.+++|+..+.+..+
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~N 62 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVEN 62 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcC
Confidence 45667789999999999999999999999999999999999865544433
No 70
>PLN02382 probable sucrose-phosphatase
Probab=98.33 E-value=3.2e-06 Score=95.96 Aligned_cols=147 Identities=15% Similarity=0.118 Sum_probs=96.0
Q ss_pred CCcHHHHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcc--ccccccc-cch---------------------
Q 001949 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLV--DFVGRSY-TAS--------------------- 646 (992)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~--~~~~~~~-~~~--------------------- 646 (992)
.+.+...+++ +++++.|+.++++|||++.....+.+++++..+.. ..+|..+ .+.
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v 107 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIV 107 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhH
Confidence 3554455555 88999999999999999999999999999877631 1111100 000
Q ss_pred --hhhcC--------------------CHH-------HHHHHhc----ceeE------EeecCh--hhHHHHHHHHhhc-
Q 001949 647 --EFEEL--------------------PAM-------QQTVALQ----HMAL------FTRVEP--SHKRMLVEALQNQ- 684 (992)
Q Consensus 647 --~~~~~--------------------~~~-------~~~~~~~----~~~v------~~r~~p--~~K~~iv~~l~~~- 684 (992)
.+..+ ..+ ++.+.+. .+.+ +....| ..|...++.+.+.
T Consensus 108 ~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~ 187 (413)
T PLN02382 108 VEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKL 187 (413)
T ss_pred HHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHh
Confidence 00000 000 0111110 1111 223344 3688888888664
Q ss_pred ------CCEEEEEcCCcCCHHHHhhCC-eeEEecCCcHHHHhcc--------Ceee-cCCCchHHHHHHH
Q 001949 685 ------NEVVAMTGDGVNDAPALKKAD-IGIAMGSGTAVAKSAS--------DMVL-ADDNFATIVAAVA 738 (992)
Q Consensus 685 ------~~~v~~iGDg~ND~~~l~~A~-vgIa~g~~~~~~~~~a--------d~vl-~~~~~~~i~~~i~ 738 (992)
...|+++||+.||.+||+.|+ .||+|+|+.+.+|+.+ +++. .+..-+++.++++
T Consensus 188 ~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~ 257 (413)
T PLN02382 188 KAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIG 257 (413)
T ss_pred hhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHH
Confidence 358999999999999999999 6999999999999753 4443 3556788888885
No 71
>PRK08238 hypothetical protein; Validated
Probab=98.30 E-value=0.00018 Score=83.04 Aligned_cols=99 Identities=20% Similarity=0.339 Sum_probs=74.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
|++|++.+.+++++++|++++++|+.....+..+++.+|+.+. ++..++. .++.|
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-------Vigsd~~------------------~~~kg 126 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-------VFASDGT------------------TNLKG 126 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-------EEeCCCc------------------cccCC
Confidence 4789999999999999999999999999999999999998321 2222111 12456
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAV 716 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~ 716 (992)
+.|.+.++..... +.+.++||+.+|.+|++.|+-.++++.+...
T Consensus 127 ~~K~~~l~~~l~~-~~~~yvGDS~~Dlp~~~~A~~av~Vn~~~~l 170 (479)
T PRK08238 127 AAKAAALVEAFGE-RGFDYAGNSAADLPVWAAARRAIVVGASPGV 170 (479)
T ss_pred chHHHHHHHHhCc-cCeeEecCCHHHHHHHHhCCCeEEECCCHHH
Confidence 6676655432222 2367889999999999999999999855443
No 72
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.29 E-value=5.6e-06 Score=86.59 Aligned_cols=48 Identities=21% Similarity=0.237 Sum_probs=40.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC-CCcccccc
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF-DHLVDFVG 640 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~-~~~~~~~~ 640 (992)
..+.++++|++++++|++++++|||....+..+.+.+|+. .+.++.+|
T Consensus 17 ~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NG 65 (221)
T TIGR02463 17 DWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENG 65 (221)
T ss_pred CcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCC
Confidence 4455899999999999999999999999999999999986 44444333
No 73
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.24 E-value=7.8e-06 Score=84.90 Aligned_cols=111 Identities=19% Similarity=0.156 Sum_probs=78.0
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEE--e-
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF--T- 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~--~- 667 (992)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++..... ..+...+.+..+..... ....+ .
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i-~~n~~~~~~~~~~~~~p--------~~~~~~~~~ 139 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRI-YCNEADFSNEYIHIDWP--------HPCDGTCQN 139 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccE-EeceeEeeCCeeEEeCC--------CCCcccccc
Confidence 478999999999999999999999999999999988887543221 11111222221110000 00000 0
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
.+ ...|..+++.++...+.++|+|||.||.+|++.||+.++=+
T Consensus 140 ~c-g~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 140 QC-GCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFARD 182 (214)
T ss_pred CC-CCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEehH
Confidence 11 34699999999888888999999999999999999988754
No 74
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.19 E-value=2.8e-06 Score=86.71 Aligned_cols=92 Identities=23% Similarity=0.312 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChh-h
Q 001949 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS-H 673 (992)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~-~ 673 (992)
+++.+.|+.++++|++++++||.....+..+++.+|+...... ... +..-. ......+.++. +
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~------~~~-~~~~~---------~~~~~~~~~~~~~ 155 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVI------GNE-LFDNG---------GGIFTGRITGSNC 155 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEE------EEE-EECTT---------CCEEEEEEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEE------EEe-eeecc---------cceeeeeECCCCC
Confidence 7888999999999999999999999999999999999863211 111 00000 12234455544 3
Q ss_pred --HHHHHHHH------hhcCCEEEEEcCCcCCHHHHh
Q 001949 674 --KRMLVEAL------QNQNEVVAMTGDGVNDAPALK 702 (992)
Q Consensus 674 --K~~iv~~l------~~~~~~v~~iGDg~ND~~~l~ 702 (992)
|...++.+ +.....++++|||.||.+|+|
T Consensus 156 ~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 156 GGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp SHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred CcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 99999999 445789999999999999987
No 75
>PLN02954 phosphoserine phosphatase
Probab=98.18 E-value=1.4e-05 Score=83.84 Aligned_cols=125 Identities=18% Similarity=0.257 Sum_probs=82.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC-cccccccc------ccchhhhcCCHHHHHHHhccee
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH-LVDFVGRS------YTASEFEELPAMQQTVALQHMA 664 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 664 (992)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+... ... +... +.+.....
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~-~~~~~~~~g~~~g~~~~~-------------- 148 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFA-NQILFGDSGEYAGFDENE-------------- 148 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEE-eEEEEcCCCcEECccCCC--------------
Confidence 4789999999999999999999999999999999999999631 110 0000 00000000
Q ss_pred EEeecChhhHHHHHHHHhhc--CCEEEEEcCCcCCHHHHhh--CCeeEEecCC--cHHHHhccCeeecCCCchHHHH
Q 001949 665 LFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKK--ADIGIAMGSG--TAVAKSASDMVLADDNFATIVA 735 (992)
Q Consensus 665 v~~r~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~--A~vgIa~g~~--~~~~~~~ad~vl~~~~~~~i~~ 735 (992)
.. ..+..|.+.++.+.++ .+.++++||+.||..|.++ ++++++.|.. .+.....+|+++.+ +..+..
T Consensus 149 ~~--~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~el~~ 221 (224)
T PLN02954 149 PT--SRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVTD--FQDLIE 221 (224)
T ss_pred cc--cCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEECC--HHHHHH
Confidence 00 1123477777766654 3579999999999999888 4555655522 23445568998854 444443
No 76
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.16 E-value=1.3e-05 Score=83.93 Aligned_cols=51 Identities=10% Similarity=0.135 Sum_probs=44.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccc
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVG 640 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~ 640 (992)
++...+.+.++|++|+++||.++++||+.......+.+++|+..+.+..+|
T Consensus 16 ~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNG 66 (302)
T PRK12702 16 EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDG 66 (302)
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCC
Confidence 345778899999999999999999999999999999999999866554443
No 77
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.11 E-value=1.2e-05 Score=83.89 Aligned_cols=109 Identities=17% Similarity=0.140 Sum_probs=75.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeE--E-ee
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL--F-TR 668 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~-~r 668 (992)
+++|++.+.++.|++.|+++.++||-....+..+.+++ +.......+...++++....-... ... + .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~~i~~n~~~~~~~~~~~~kp~--------p~~~~~~~~ 144 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKEQIYCNGSDFSGEYITITWPH--------PCDEHCQNH 144 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcCcEEEeEEEecCCeeEEeccC--------Ccccccccc
Confidence 68999999999999999999999999999999999988 643111111111222211100000 000 0 00
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
+ ...|..+++.++..+..++++|||.||..|.++||+.++-
T Consensus 145 ~-~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~ 185 (219)
T PRK09552 145 C-GCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR 185 (219)
T ss_pred C-CCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH
Confidence 1 1248889999888888999999999999999999997773
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.11 E-value=1.8e-05 Score=82.51 Aligned_cols=126 Identities=22% Similarity=0.311 Sum_probs=93.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeec
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (992)
...+-|++++++..|+++|++..++|++....+..+.+..|+....... +.++... ..+-
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i----~g~~~~~----------------~~KP 146 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVI----VGGDDVP----------------PPKP 146 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceE----EcCCCCC----------------CCCc
Confidence 4578899999999999999999999999999999999999998765321 1111111 0113
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCC---eeEEecC--CcHHHHhccCeeecCCCchHHHHHH
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD---IGIAMGS--GTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~---vgIa~g~--~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
.|.....+++.+....+.++||||+.+|..|-++|+ ||+..|. ........+|+++.+ ...+...+
T Consensus 147 ~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~~--~~el~~~l 217 (220)
T COG0546 147 DPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVIDS--LAELLALL 217 (220)
T ss_pred CHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEECC--HHHHHHHH
Confidence 456666777777666568999999999999999999 6677773 445666668999864 44454443
No 79
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.08 E-value=2.2e-05 Score=82.41 Aligned_cols=127 Identities=21% Similarity=0.298 Sum_probs=89.6
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.++.|++.+.++.|+++|+++.++||........+.+.+|+..... .++..+.... .+-.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~kp~ 151 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFS----VVIGGDSLPN----------------KKPD 151 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCcc----EEEcCCCCCC----------------CCcC
Confidence 4688999999999999999999999999999999999999865321 1121111100 0112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCe-eEEecC----CcHHHHhccCeeecCCCchHHHHHHHH
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAMGS----GTAVAKSASDMVLADDNFATIVAAVAE 739 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~v-gIa~g~----~~~~~~~~ad~vl~~~~~~~i~~~i~~ 739 (992)
|+--..+++.++...+.++++||+.+|+.+.+.||+ +|.+.. ..+.....+|+++ +++..+...+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i--~~~~~l~~~l~~ 223 (226)
T PRK13222 152 PAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVI--DHFAELLPLLGL 223 (226)
T ss_pred hHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEE--CCHHHHHHHHHH
Confidence 333345566666667789999999999999999999 555532 2344455788887 457777776644
No 80
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.04 E-value=1.4e-05 Score=82.26 Aligned_cols=105 Identities=12% Similarity=0.118 Sum_probs=77.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc-c---ccccccchhhhcCCHHHHHHHhcceeE
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD-F---VGRSYTASEFEELPAMQQTVALQHMAL 665 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (992)
..++++++.+.++.++++|++++++||.....+..+++.+|+...... . .+...+|....
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~---------------- 148 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTGNIDG---------------- 148 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeCCccC----------------
Confidence 457899999999999999999999999999999999999998653211 0 00111111000
Q ss_pred EeecChhhHHHHHHHHhh-cC---CEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 666 FTRVEPSHKRMLVEALQN-QN---EVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~-~~---~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
-.+.++.|...++.+.+ .+ +.++++||+.+|.+|++.|+.++++.
T Consensus 149 -~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 149 -NNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 01345678887776654 33 37899999999999999999999986
No 81
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.04 E-value=1.4e-05 Score=81.24 Aligned_cols=114 Identities=20% Similarity=0.219 Sum_probs=77.0
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEee-c
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR-V 669 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r-~ 669 (992)
-++.+++.+.++.|++.|+++.++|+........+.+..|+..... .+++.+...+ .+........+...+.. .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFI----EIYSNPASFD-NDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhhee----EEeccCceEC-CCCcEEEecCCCCccCcCC
Confidence 4788999999999999999999999999999999999999865321 1121111000 00000000000001111 1
Q ss_pred ChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 670 EPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
....|.++++.++++ .+.++++|||.||..|.++||+-.|
T Consensus 146 ~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred CCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 123589999999887 8899999999999999999987554
No 82
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.02 E-value=3.4e-05 Score=89.91 Aligned_cols=44 Identities=7% Similarity=0.095 Sum_probs=39.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCc
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL 635 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~ 635 (992)
...+.+.++|++++++|+.++++|||....+..+++++|+..+.
T Consensus 433 ~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~ 476 (694)
T PRK14502 433 YSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPF 476 (694)
T ss_pred ccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeE
Confidence 35578899999999999999999999999999999999986433
No 83
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.00 E-value=1.2e-05 Score=80.87 Aligned_cols=96 Identities=24% Similarity=0.278 Sum_probs=70.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccc---c-ccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
++|++.+.++.+++.|++++++||.....+..+++.+|+...... . ....+++.... -..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~~~~----------------~~~ 137 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGPIEG----------------QVN 137 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCccCC----------------ccc
Confidence 679999999999999999999999999999999999998642211 0 00011111000 012
Q ss_pred cChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhC
Q 001949 669 VEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA 704 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A 704 (992)
..+..|...++.++++ .+.++++|||.||.+|++.|
T Consensus 138 ~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 138 PEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred CCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 4457899999887654 45799999999999999875
No 84
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=97.96 E-value=1.8e-05 Score=75.49 Aligned_cols=118 Identities=18% Similarity=0.125 Sum_probs=77.8
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.-..++.+++.+.+++|+++|++++++||+....+....+.+|+..... .++......................+.
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFD----PVITSNGAAIYYPKEGLFLGGGPFDIG 95 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhh----heeccchhhhhcccccccccccccccC
Confidence 4456899999999999999999999999999999999999999843221 111111000000000000011122333
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhh-CCeeEE
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK-ADIGIA 709 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~-A~vgIa 709 (992)
+-.++.+..+.+.+....+.++++||+.+|+.|.+. ..-+|+
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 96 KPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred CCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 455666667777776667889999999999999998 444443
No 85
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=97.93 E-value=3.5e-05 Score=79.56 Aligned_cols=124 Identities=18% Similarity=0.238 Sum_probs=86.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+++++|+++|+++.++||.....+....+.+|+..... .++..++.. ..+-.|
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~----------------~~KP~~ 134 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFD----HVIGSDEVP----------------RPKPAP 134 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhhee----eEEecCcCC----------------CCCCCh
Confidence 678999999999999999999999999999999999999865321 111111110 112233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-e--c--CCcHHHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--G--SGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~--g--~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+--..+++.++-..+.+++|||+.+|+.+-++||+... + | +..+..+..+|+++.+ ...+..++
T Consensus 135 ~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~~--~~~l~~~~ 203 (205)
T TIGR01454 135 DIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLRK--PQSLLALC 203 (205)
T ss_pred HHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeCC--HHHHHHHh
Confidence 33445555565557789999999999999999999643 2 3 3334456778998744 44555444
No 86
>PTZ00174 phosphomannomutase; Provisional
Probab=97.88 E-value=6.2e-05 Score=79.94 Aligned_cols=54 Identities=22% Similarity=0.294 Sum_probs=45.7
Q ss_pred hhHHHHHHHHhhcCCEEEEEcC----CcCCHHHHhhC-CeeEEecCCcHHHHhccCeee
Q 001949 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKKA-DIGIAMGSGTAVAKSASDMVL 725 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~~l~~A-~vgIa~g~~~~~~~~~ad~vl 725 (992)
.+|+..++.+.+..+.|+++|| |.||.+||+.| -.|++++|+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v~n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVKNPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEeCCHHHHHHHHHHHhc
Confidence 4788999999888889999999 99999999976 577777799999988776543
No 87
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=97.86 E-value=9.5e-05 Score=79.18 Aligned_cols=138 Identities=12% Similarity=0.230 Sum_probs=86.6
Q ss_pred CCcHHHHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccc------------cchh-----------
Q 001949 592 PPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSY------------TASE----------- 647 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~------------~~~~----------- 647 (992)
.+.+++.++|++|++ .|++++++|||+...+..+.+.+++. ....+|..+ ..+.
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~--~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~ 113 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFP--LAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTA 113 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccce--EEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHH
Confidence 567899999999998 89999999999999999888776642 111111000 0000
Q ss_pred --------h-----------hcCC--HHHHHHH---hc----cee-----EEeecCh--hhHHHHHHHHhhc----CCEE
Q 001949 648 --------F-----------EELP--AMQQTVA---LQ----HMA-----LFTRVEP--SHKRMLVEALQNQ----NEVV 688 (992)
Q Consensus 648 --------~-----------~~~~--~~~~~~~---~~----~~~-----v~~r~~p--~~K~~iv~~l~~~----~~~v 688 (992)
+ .... .+..... +. ... -+....| .+|...++.+.+. ...+
T Consensus 114 ~~~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v 193 (266)
T PRK10187 114 LAQLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTP 193 (266)
T ss_pred hccCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeE
Confidence 0 0000 0111110 00 011 1112223 4788888877654 4679
Q ss_pred EEEcCCcCCHHHHhhC----CeeEEecCCcHHHHhccCeeecCCCchHHHHHH
Q 001949 689 AMTGDGVNDAPALKKA----DIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 689 ~~iGDg~ND~~~l~~A----~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+++||+.||.+|++.+ +.||+||++.+ .|++.+. +...+...+
T Consensus 194 ~~~GD~~nD~~mf~~~~~~~g~~vavg~a~~----~A~~~l~--~~~~v~~~L 240 (266)
T PRK10187 194 VFVGDDLTDEAGFAVVNRLGGISVKVGTGAT----QASWRLA--GVPDVWSWL 240 (266)
T ss_pred EEEcCCccHHHHHHHHHhcCCeEEEECCCCC----cCeEeCC--CHHHHHHHH
Confidence 9999999999999999 99999998753 4677775 355555554
No 88
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.75 E-value=0.00014 Score=78.46 Aligned_cols=125 Identities=12% Similarity=0.229 Sum_probs=83.8
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.++.|++.++++.|+++|+++.++||.+...+..+.++.|+..... .++.+++... .+-.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~----~i~~~d~~~~----------------~Kp~ 159 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR----WIIGGDTLPQ----------------KKPD 159 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----EEEecCCCCC----------------CCCC
Confidence 4688999999999999999999999999998988888888754321 1111111100 0112
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee-EEe--c-C-CcHHHHhccCeeecCCCchHHHHHH
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAM--G-S-GTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Ia~--g-~-~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
|+--..+++.+.-..+.+++|||+.||+.|.+.|++. +++ | + ..+.....+|+++. ++..+..++
T Consensus 160 p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~el~~~~ 229 (272)
T PRK13223 160 PAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRALLPGC 229 (272)
T ss_pred cHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHHHHHHH
Confidence 2222344454444567899999999999999999973 344 3 2 22334457898884 465555444
No 89
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.70 E-value=0.00017 Score=74.97 Aligned_cols=124 Identities=21% Similarity=0.210 Sum_probs=85.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+..... .++..++... .+..|
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~----~i~~~~~~~~----------------~Kp~p 141 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFD----VVITLDDVEH----------------AKPDP 141 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhcee----EEEecCcCCC----------------CCCCc
Confidence 377999999999999999999999999999999999999876431 1111111100 11234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE---ecCC-cH-HHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA---MGSG-TA-VAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa---~g~~-~~-~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+--.++++.++.....+++|||+.+|..+-++||+-.. -|.. .+ .....+|+++. ++..+...+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~~i 210 (214)
T PRK13288 142 EPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLAIV 210 (214)
T ss_pred HHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHHHH
Confidence 44445555555556789999999999999999998533 3422 22 23446888875 466665544
No 90
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.67 E-value=0.00016 Score=75.20 Aligned_cols=116 Identities=16% Similarity=0.174 Sum_probs=80.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+++|+++.++|+.....+..+.+..|+..... .++.+++... .+-.|
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~~----------------~Kp~p 144 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----VLIGGDSLAQ----------------RKPHP 144 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc----EEEecCCCCC----------------CCCCh
Confidence 578999999999999999999999999999999999999865431 1111111100 01223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-e--cCC--cHHHHhccCeeecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSG--TAVAKSASDMVLAD 727 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~--g~~--~~~~~~~ad~vl~~ 727 (992)
+-=..+.+.++...+.++++||+.+|+.+.++||+-.. + |.. .......+|+++.+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~~ 205 (213)
T TIGR01449 145 DPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYDS 205 (213)
T ss_pred HHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeCC
Confidence 33344555555556789999999999999999998765 3 321 22333468887743
No 91
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.65 E-value=0.00042 Score=73.12 Aligned_cols=129 Identities=14% Similarity=0.183 Sum_probs=86.0
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccc--------cccccchhhhcCCHHHHHHHhcc
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFV--------GRSYTASEFEELPAMQQTVALQH 662 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 662 (992)
-+++||+.+.++.|+++|+++.++||-....+..+.+++|+......+. +.+.+|.. ..+
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~IvSN~L~f~~dGvltG~~-~P~----------- 187 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKVVSNFMDFDEDGVLKGFK-GPL----------- 187 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceEEeeeEEECCCCeEeCCC-CCc-----------
Confidence 4679999999999999999999999999999999999999865432210 11111210 000
Q ss_pred eeEEeecChhhHHHHHH-----HHh--hcCCEEEEEcCCcCCHHHHhhC---CeeEEec--CCc-----HHHHhccCeee
Q 001949 663 MALFTRVEPSHKRMLVE-----ALQ--NQNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVL 725 (992)
Q Consensus 663 ~~v~~r~~p~~K~~iv~-----~l~--~~~~~v~~iGDg~ND~~~l~~A---~vgIa~g--~~~-----~~~~~~ad~vl 725 (992)
+....|.+.+. .++ .....|+++|||.||++|..-. .--+.+| |.. +.-+++-|+|+
T Consensus 188 ------i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl 261 (277)
T TIGR01544 188 ------IHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVL 261 (277)
T ss_pred ------ccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEE
Confidence 11134554433 222 2346899999999999995433 2334455 433 23466889999
Q ss_pred cCCCchHHHHHH
Q 001949 726 ADDNFATIVAAV 737 (992)
Q Consensus 726 ~~~~~~~i~~~i 737 (992)
.+|.--.++..|
T Consensus 262 ~~D~t~~v~~~i 273 (277)
T TIGR01544 262 VQDETLEVANSI 273 (277)
T ss_pred ECCCCchHHHHH
Confidence 988776666655
No 92
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=97.64 E-value=0.0002 Score=75.73 Aligned_cols=68 Identities=21% Similarity=0.265 Sum_probs=48.9
Q ss_pred hhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHH-----HHhcc---C-eeecCCCchHHHHHHH
Q 001949 672 SHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIAMGSGTAV-----AKSAS---D-MVLADDNFATIVAAVA 738 (992)
Q Consensus 672 ~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~-----~~~~a---d-~vl~~~~~~~i~~~i~ 738 (992)
..|...++.++++ .+.|+++||+.||.+||..++-||.+||+.+. ..... . +......-.+|+++++
T Consensus 164 a~K~~Al~~L~~~~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~ 243 (247)
T PF05116_consen 164 ASKGAALRYLMERWGIPPEQVLVAGDSGNDLEMLEGGDHGVVVGNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQ 243 (247)
T ss_dssp -SHHHHHHHHHHHHT--GGGEEEEESSGGGHHHHCCSSEEEE-TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHH
T ss_pred CCHHHHHHHHHHHhCCCHHHEEEEeCCCCcHHHHcCcCCEEEEcCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHH
Confidence 4799999999876 35788899999999999999999999998888 22222 2 4445566678887775
Q ss_pred H
Q 001949 739 E 739 (992)
Q Consensus 739 ~ 739 (992)
|
T Consensus 244 ~ 244 (247)
T PF05116_consen 244 H 244 (247)
T ss_dssp H
T ss_pred H
Confidence 4
No 93
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.56 E-value=0.00026 Score=74.04 Aligned_cols=117 Identities=15% Similarity=0.148 Sum_probs=78.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
-++.|++.++++.|+++|+++.++|+........+.+.+|+..... .++.+++.. ..+-.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----~~~~~~~~~----------------~~Kp~ 150 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFD----ALASAEKLP----------------YSKPH 150 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhccc----EEEEcccCC----------------CCCCC
Confidence 4678999999999999999999999999999999999999876432 122211110 01122
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe-cCC---cHHHHhccCeeecC
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM-GSG---TAVAKSASDMVLAD 727 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~-g~~---~~~~~~~ad~vl~~ 727 (992)
|+-=..+.+.+.-..+.++++||+.||+.+-+.||+.... ..+ .+.-...+|+++.+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~~ 211 (222)
T PRK10826 151 PEVYLNCAAKLGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLES 211 (222)
T ss_pred HHHHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheeccC
Confidence 3322333444444457899999999999999999987653 222 11223346776643
No 94
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=97.52 E-value=0.00042 Score=71.44 Aligned_cols=39 Identities=21% Similarity=0.327 Sum_probs=36.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG 630 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g 630 (992)
++.+++.++|++|++.|++++++|||....+..+.+.++
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~ 55 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLP 55 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCC
Confidence 588999999999999999999999999999999998754
No 95
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.48 E-value=0.00063 Score=72.34 Aligned_cols=119 Identities=16% Similarity=0.173 Sum_probs=84.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+++|+++.++|+.....+....+.+|+.... ..++.+++... .+-.|
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F----d~iv~~~~~~~----------------~KP~p 167 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFF----QAVIIGSECEH----------------AKPHP 167 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhC----cEEEecCcCCC----------------CCCCh
Confidence 57889999999999999999999999999999999999987643 12222322211 11334
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-e--cCCcH-HHHhccCeeecCCCc
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSGTA-VAKSASDMVLADDNF 730 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~--g~~~~-~~~~~ad~vl~~~~~ 730 (992)
+--..+++.++...+.+++|||+.+|+.+-++|++-.. + |...+ .....+|+++.+...
T Consensus 168 ~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 168 DPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred HHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 44455666666667789999999999999999998643 3 22212 223468888866543
No 96
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.42 E-value=0.00055 Score=72.95 Aligned_cols=116 Identities=16% Similarity=0.141 Sum_probs=82.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.....+..+-+.+|+.... ..++++++... .+-.|
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~F----d~ii~~~d~~~----------------~KP~P 168 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFF----SVVLAAEDVYR----------------GKPDP 168 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhC----cEEEecccCCC----------------CCCCH
Confidence 56899999999999999999999999999999999999987643 22233322211 11233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE-Ee-cCCcHHHHhccCeeecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AM-GSGTAVAKSASDMVLAD 727 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI-a~-g~~~~~~~~~ad~vl~~ 727 (992)
+-=..+++.++-..+.+++|||+.+|+.+-+.|++-. ++ |.........+|+++.+
T Consensus 169 e~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~~ 226 (260)
T PLN03243 169 EMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVRR 226 (260)
T ss_pred HHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeCC
Confidence 3334556666666778999999999999999999854 33 32223333457887654
No 97
>PRK11590 hypothetical protein; Provisional
Probab=97.41 E-value=0.00074 Score=69.84 Aligned_cols=106 Identities=13% Similarity=0.078 Sum_probs=75.2
Q ss_pred CCcHHHHHHH-HHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeE-Eeec
Q 001949 592 PPREEVKNAM-LSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL-FTRV 669 (992)
Q Consensus 592 ~~~~~~~~~i-~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~r~ 669 (992)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.... . ++ +.+++.. ....+ -..|
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~~-~----~i-~t~l~~~---------~tg~~~g~~c 159 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPRV-N----LI-ASQMQRR---------YGGWVLTLRC 159 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccccC-c----eE-EEEEEEE---------EccEECCccC
Confidence 4589999999 5788899999999999999999999999962210 0 11 1111100 00001 1126
Q ss_pred ChhhHHHHHHHH-hhcCCEEEEEcCCcCCHHHHhhCCeeEEecC
Q 001949 670 EPSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (992)
Q Consensus 670 ~p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~ 712 (992)
..++|..-++.. ........+-||+.||.|||+.|+.+++++.
T Consensus 160 ~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vnp 203 (211)
T PRK11590 160 LGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVTP 203 (211)
T ss_pred CChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEECc
Confidence 678898877754 4345566789999999999999999999963
No 98
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.40 E-value=0.00065 Score=69.90 Aligned_cols=106 Identities=15% Similarity=0.097 Sum_probs=74.6
Q ss_pred CCcHHHHHHHH-HHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAML-SCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~-~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+.|++.+.|+ .++++|++++++|+-....+..+|+..|+.... .++ +.+++..... ...-..|.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~-----~~i-~t~le~~~gg--------~~~g~~c~ 159 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRL-----NLI-ASQIERGNGG--------WVLPLRCL 159 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccC-----cEE-EEEeEEeCCc--------eEcCccCC
Confidence 57899999996 788899999999999999999999996653311 011 1111110000 00112366
Q ss_pred hhhHHHHHHHH-hhcCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 671 PSHKRMLVEAL-QNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 671 p~~K~~iv~~l-~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
.++|..-++.. ........+-||+.||.|||+.||.+++++
T Consensus 160 g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 78898877654 333455678999999999999999999996
No 99
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.39 E-value=0.00075 Score=70.86 Aligned_cols=116 Identities=15% Similarity=0.078 Sum_probs=81.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.+...+..+-+.+|+.... ..++.+++.. ..+-.|
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f----~~i~~~~~~~----------------~~KP~p 154 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRC----AVLIGGDTLA----------------ERKPHP 154 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhcc----cEEEecCcCC----------------CCCCCH
Confidence 57899999999999999999999999998888888888886532 1111211110 012334
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-e--cC--Cc-HHHHhccCeeecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GS--GT-AVAKSASDMVLAD 727 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~--g~--~~-~~~~~~ad~vl~~ 727 (992)
+--..+++.++-..+.+++|||+.+|..|-+.||+... + |. .. ......+|+++.+
T Consensus 155 ~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~~ 216 (229)
T PRK13226 155 LPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVEQ 216 (229)
T ss_pred HHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeCC
Confidence 44456667777667889999999999999999998753 3 32 11 2223468888854
No 100
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.36 E-value=0.0014 Score=70.44 Aligned_cols=121 Identities=13% Similarity=0.149 Sum_probs=82.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...... ++++++.. ..|
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~----vi~~~~~~-------------------~k~ 198 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV----VQAGTPIL-------------------SKR 198 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE----EEecCCCC-------------------CCH
Confidence 5789999999999999999999999999999999999998654311 11111100 012
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-e--cCCcH--HHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-M--GSGTA--VAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~--g~~~~--~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+--..+++.++...+.+++|||+.+|+.+-++|++-.. + |.... .....+|+++. ++..+...+
T Consensus 199 ~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~~~ 267 (273)
T PRK13225 199 RALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQAV 267 (273)
T ss_pred HHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHHHH
Confidence 22223333444345689999999999999999998654 2 32222 23446899874 455665544
No 101
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=97.34 E-value=0.0012 Score=81.57 Aligned_cols=151 Identities=19% Similarity=0.257 Sum_probs=92.0
Q ss_pred CCcEEEEEecc--cCCCcHHHHHHHHHHHh-CCcEEEEEcCCCHHHHHHHHHHhCCCCCcccccccccc--chhhh----
Q 001949 579 KDLTFIGLVGM--LDPPREEVKNAMLSCMT-AGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYT--ASEFE---- 649 (992)
Q Consensus 579 ~~l~~lG~i~~--~d~~~~~~~~~i~~l~~-~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~--~~~~~---- 649 (992)
-|.+++....- ...+.+++.++|++|.+ .|+.|+++|||............++. ....+|..+. +....
T Consensus 499 ~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~--liaenG~~i~~~~~~w~~~~~ 576 (726)
T PRK14501 499 YDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIH--LVAEHGAWSRAPGGEWQLLEP 576 (726)
T ss_pred cCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeE--EEEeCCEEEeCCCCceEECCC
Confidence 46666653211 12477999999999999 69999999999999888776655431 1111111000 00000
Q ss_pred -------------------------------------cCCH-------HHHHHHhc------cee-------EEeecChh
Q 001949 650 -------------------------------------ELPA-------MQQTVALQ------HMA-------LFTRVEPS 672 (992)
Q Consensus 650 -------------------------------------~~~~-------~~~~~~~~------~~~-------v~~r~~p~ 672 (992)
+... ++....+. ... +-.+....
T Consensus 577 ~~~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~v 656 (726)
T PRK14501 577 VATEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGV 656 (726)
T ss_pred cchhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCC
Confidence 0000 00111110 011 11122235
Q ss_pred hHHHHHHHHhhc--CCEEEEEcCCcCCHHHHhhC---CeeEEecCCcHHHHhccCeeecCCCchHHHHHH
Q 001949 673 HKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKA---DIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 673 ~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~A---~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+|...++.+.+. ...++++||+.||.+|++.+ +.+|+||++ +.+|++.+.+. ..+..++
T Consensus 657 nKG~al~~ll~~~~~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG~~----~s~A~~~l~~~--~eV~~~L 720 (726)
T PRK14501 657 NKGRAVRRLLEAGPYDFVLAIGDDTTDEDMFRALPETAITVKVGPG----ESRARYRLPSQ--REVRELL 720 (726)
T ss_pred CHHHHHHHHHhcCCCCEEEEECCCCChHHHHHhcccCceEEEECCC----CCcceEeCCCH--HHHHHHH
Confidence 799998888874 45899999999999999986 689999874 46788988754 4466555
No 102
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.26 E-value=0.0015 Score=68.21 Aligned_cols=116 Identities=26% Similarity=0.276 Sum_probs=78.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC--CCccccccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF--DHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
.++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+. ... ..++...+... .+
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f----~~i~~~~~~~~----------------~K 145 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDV----DAVVCPSDVAA----------------GR 145 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccC----CEEEcCCcCCC----------------CC
Confidence 479999999999999999999999999999999999999987 332 12222221110 01
Q ss_pred cChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeEE--ecCC--c-HH-HHhccCeeec
Q 001949 669 VEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA--MGSG--T-AV-AKSASDMVLA 726 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa--~g~~--~-~~-~~~~ad~vl~ 726 (992)
-.|+-=...++.+.-. .+.+++|||+.+|+.+-+.||+..+ +..+ . +. ....+|+++.
T Consensus 146 P~p~~~~~a~~~~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~~~~~~i~ 210 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVLTGAHDAEELSRHPHTHVLD 210 (220)
T ss_pred CCHHHHHHHHHHcCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEecCCCcHHHHhhcCCceeec
Confidence 2233333444444433 4689999999999999999999863 3222 2 12 2334677764
No 103
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.23 E-value=0.0021 Score=68.66 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=70.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+..... ..++.+++... .+-.|
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~---d~ii~~~~~~~----------------~KP~p 159 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRP---DYNVTTDDVPA----------------GRPAP 159 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCC---ceEEccccCCC----------------CCCCH
Confidence 467899999999999999999999999999999999999876421 12222221110 11234
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 672 ~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
+--...++.+.-. .+.+++|||+.+|+.+-+.|++-.
T Consensus 160 ~~~~~a~~~l~~~~~~~~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 160 WMALKNAIELGVYDVAACVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred HHHHHHHHHcCCCCchheEEECCcHHHHHHHHHCCCeE
Confidence 4334555555543 567999999999999999999754
No 104
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.22 E-value=0.0021 Score=69.31 Aligned_cols=96 Identities=15% Similarity=0.053 Sum_probs=67.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+++|+++.++||.....+..+-+..|+..... ..++..++.. ..+-.|
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~---d~i~~~~~~~----------------~~KP~p 161 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRP---DHVVTTDDVP----------------AGRPYP 161 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCc---eEEEcCCcCC----------------CCCCCh
Confidence 567899999999999999999999999998888888877654321 1122222110 011223
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCe
Q 001949 672 SHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADI 706 (992)
Q Consensus 672 ~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~v 706 (992)
+-=..+++.+.-. .+.+++|||+.+|+.+-+.|++
T Consensus 162 ~~~~~a~~~l~~~~~~e~l~IGDs~~Di~aA~~aG~ 197 (267)
T PRK13478 162 WMALKNAIELGVYDVAACVKVDDTVPGIEEGLNAGM 197 (267)
T ss_pred HHHHHHHHHcCCCCCcceEEEcCcHHHHHHHHHCCC
Confidence 3334444444433 3679999999999999999997
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.18 E-value=0.0011 Score=68.79 Aligned_cols=89 Identities=17% Similarity=0.252 Sum_probs=63.2
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCC----HHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEE
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDN----KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~----~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (992)
-.+.+++++.++.+++.|+++.++|||. ..++..+.+.+|+..... ... ++
T Consensus 113 a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~--f~v-----------------------il 167 (237)
T PRK11009 113 SIPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNM--NPV-----------------------IF 167 (237)
T ss_pred CcchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccc--eeE-----------------------EE
Confidence 3477889999999999999999999975 568888999899942110 011 22
Q ss_pred eecCh--hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 667 TRVEP--SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 667 ~r~~p--~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
+..++ .+|...+ ++.+ .++++||..+|..+-++||+-.
T Consensus 168 ~gd~~~K~~K~~~l---~~~~-i~I~IGDs~~Di~aA~~AGi~~ 207 (237)
T PRK11009 168 AGDKPGQYTKTQWL---KKKN-IRIFYGDSDNDITAAREAGARG 207 (237)
T ss_pred cCCCCCCCCHHHHH---HhcC-CeEEEcCCHHHHHHHHHcCCcE
Confidence 21111 3344433 3443 5899999999999999998854
No 106
>PRK11587 putative phosphatase; Provisional
Probab=97.17 E-value=0.0023 Score=66.71 Aligned_cols=115 Identities=16% Similarity=0.068 Sum_probs=77.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.....+...-+..|+... ..++++++... .+-.|
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-----~~i~~~~~~~~----------------~KP~p 141 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-----EVFVTAERVKR----------------GKPEP 141 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-----cEEEEHHHhcC----------------CCCCc
Confidence 5789999999999999999999999987777666667776321 11222221110 11233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee-EEecCCc-HHHHhccCeeecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMGSGT-AVAKSASDMVLAD 727 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Ia~g~~~-~~~~~~ad~vl~~ 727 (992)
+--....+.+.-..+.+++|||+.+|+.+-+.|++- |++..+. ......+|+++.+
T Consensus 142 ~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~ 199 (218)
T PRK11587 142 DAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAVNAPADTPRLDEVDLVLHS 199 (218)
T ss_pred HHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEECCCCchhhhccCCEEecc
Confidence 334445555555678899999999999999999985 4554322 2233457777654
No 107
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.16 E-value=0.0011 Score=69.02 Aligned_cols=89 Identities=18% Similarity=0.204 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCC----CHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGD----NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd----~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.+.+++.+.+++++++|+++.++|++ ...++..+.+.+|+.... ..++.++....
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f----~~i~~~d~~~~----------------- 172 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMN----PVIFAGDKPGQ----------------- 172 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchhe----eEEECCCCCCC-----------------
Confidence 35555999999999999999999999 677899999999997532 11122111100
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (992)
..| +|.. .+++.+ .++|+||+.||..+-++|++-
T Consensus 173 -~Kp-~~~~---~l~~~~-i~i~vGDs~~DI~aAk~AGi~ 206 (237)
T TIGR01672 173 -YQY-TKTQ---WIQDKN-IRIHYGDSDNDITAAKEAGAR 206 (237)
T ss_pred -CCC-CHHH---HHHhCC-CeEEEeCCHHHHHHHHHCCCC
Confidence 012 2322 344444 489999999999999999875
No 108
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.13 E-value=0.0015 Score=68.27 Aligned_cols=100 Identities=16% Similarity=0.172 Sum_probs=70.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+++|++++++|+.....+....+.+|+..... .++.+++... .+-.|
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~----~i~~~~~~~~----------------~KP~~ 153 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFD----AVITSEEEGV----------------EKPHP 153 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhcc----EEEEeccCCC----------------CCCCH
Confidence 578999999999999999999999999888888889999865431 1222211110 11223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCeeE-Eec
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGI-AMG 711 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgI-a~g 711 (992)
+--..+.+.+.-..+.+++|||+. +|+.+-++||+-. .+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~igDs~~~di~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 154 KIFYAALKRLGVKPEEAVMVGDRLDKDIKGAKNLGMKTVWIN 195 (221)
T ss_pred HHHHHHHHHcCCChhhEEEECCChHHHHHHHHHCCCEEEEEC
Confidence 333344455554567899999998 9999999999844 444
No 109
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.09 E-value=0.0014 Score=67.02 Aligned_cols=94 Identities=21% Similarity=0.119 Sum_probs=69.2
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeec
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (992)
.+++.+++.++++.|+++|+++.++||.....+..+.+.+|+..... .++..++. ..+-
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----~~~~~~~~-----------------~~KP 162 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFP----VQIWMEDC-----------------PPKP 162 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCC----EEEeecCC-----------------CCCc
Confidence 34566677999999999999999999999999999999999875431 11111111 1123
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhC
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A 704 (992)
.|+--..+++.++-..+.+++|||+.+|+.+-+.|
T Consensus 163 ~p~~~~~~~~~~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 163 NPEPLILAAKALGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHHhC
Confidence 45555566677766677899999999999987654
No 110
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.08 E-value=0.0026 Score=70.53 Aligned_cols=116 Identities=16% Similarity=0.148 Sum_probs=82.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.||+.+.++.|+++|+++.++|+.....+..+-+.+|+..... .++.+++... .+-.|
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd----~Iv~sddv~~----------------~KP~P 275 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFS----VIVAAEDVYR----------------GKPDP 275 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHce----EEEecCcCCC----------------CCCCH
Confidence 477999999999999999999999999999999999999876432 2222222110 01234
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-ecCCcHH-HHhccCeeecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSGTAV-AKSASDMVLAD 727 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~g~~~~~-~~~~ad~vl~~ 727 (992)
+-=...++.++-..+.++||||+.+|+.+-+.|++-.. +..+... ....+|+++.+
T Consensus 276 eifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~~~~~~~~l~~Ad~iI~s 333 (381)
T PLN02575 276 EMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAVASKHPIYELGAADLVVRR 333 (381)
T ss_pred HHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCChhHhcCCCEEECC
Confidence 44455666666667889999999999999999998654 3332212 22347887754
No 111
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.05 E-value=0.0026 Score=62.53 Aligned_cols=143 Identities=16% Similarity=0.210 Sum_probs=90.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcce--------
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHM-------- 663 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 663 (992)
++-|++.++++.|++.= ..+++|-.-..-+..+|+-+|+...........++.. ..++++..+++...
T Consensus 83 ~lvPgA~etm~~l~~~~-tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~---~~PeeeR~E~L~~~~~~~~~~g 158 (315)
T COG4030 83 KLVPGAEETMATLQERW-TPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSI---AVPEEEREELLSIIDVIASLSG 158 (315)
T ss_pred ccCCChHHHHHHHhccC-CceEEeccHHHHHHHHHHhcCCCccccccccccCccc---cCChHHHHHHHHhcCccccccH
Confidence 46789999999998764 4455555567778899999998653322111111100 01111111111100
Q ss_pred --------eEEeecChhh---------------HHHHHHHHhhc---CCEEEEEcCCcCCHHHHhhCC-ee-EEec-CCc
Q 001949 664 --------ALFTRVEPSH---------------KRMLVEALQNQ---NEVVAMTGDGVNDAPALKKAD-IG-IAMG-SGT 714 (992)
Q Consensus 664 --------~v~~r~~p~~---------------K~~iv~~l~~~---~~~v~~iGDg~ND~~~l~~A~-vg-Ia~g-~~~ 714 (992)
.+|.|..|.+ |+++++.+.+. ....+++||+..|..||+++. -| +|+. ||.
T Consensus 159 eelfe~lDe~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDSItDv~ml~~~rgrGglAvaFNGN 238 (315)
T COG4030 159 EELFEKLDELFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDSITDVKMLEAARGRGGLAVAFNGN 238 (315)
T ss_pred HHHHHHHHHHHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCcccchHHHHHhhccCceEEEecCC
Confidence 1455655544 55555555443 345789999999999999873 33 7776 888
Q ss_pred HHHHhccCeeecCCCchHHHHHHH
Q 001949 715 AVAKSASDMVLADDNFATIVAAVA 738 (992)
Q Consensus 715 ~~~~~~ad~vl~~~~~~~i~~~i~ 738 (992)
+-+...||+.+...+..+....|+
T Consensus 239 eYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 239 EYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred cccccccceEEeccchhhhhHHHH
Confidence 899999999998888777776663
No 112
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=96.98 E-value=0.0055 Score=59.77 Aligned_cols=103 Identities=16% Similarity=0.156 Sum_probs=66.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH---HHHHHh---C--CCC-CccccccccccchhhhcCCHHHHHHHh
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE---SICHKI---G--AFD-HLVDFVGRSYTASEFEELPAMQQTVAL 660 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~---~ia~~~---g--i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (992)
+|.+.+++.+++++++++|++++++|||....+. ....++ | +.. +....++ ..+..+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g-----~~~~~~~~------- 92 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPD-----RLFAALHR------- 92 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCC-----cchhhhhc-------
Confidence 5788999999999999999999999999988874 555552 3 321 1111111 11100000
Q ss_pred cceeEEeecChhhHHHHHHHHhh-----cCCEEEEEcCCcCCHHHHhhCCee
Q 001949 661 QHMALFTRVEPSHKRMLVEALQN-----QNEVVAMTGDGVNDAPALKKADIG 707 (992)
Q Consensus 661 ~~~~v~~r~~p~~K~~iv~~l~~-----~~~~v~~iGDg~ND~~~l~~A~vg 707 (992)
.+..+..-+.|...++.+.+ ....++.+||+.+|+.+-++++|-
T Consensus 93 ---e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 93 ---EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred ---ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCC
Confidence 01122222347777777776 345778899999999999888764
No 113
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.96 E-value=0.0025 Score=65.29 Aligned_cols=98 Identities=18% Similarity=0.256 Sum_probs=70.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+++++|+++|+++.++|+-+...+....+.+|+.... ..++..++... .+-.|
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~f----d~i~~s~~~~~----------------~KP~~ 151 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPF----DAVLSADAVRA----------------YKPAP 151 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhh----heeEehhhcCC----------------CCCCH
Confidence 57799999999999999999999999999999999999986432 12222221110 01122
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
+-=..+.+.+.-..+.+++|||+.+|+.+-++||+-..
T Consensus 152 ~~~~~~~~~~~~~p~~~~~vgD~~~Di~~A~~~G~~~i 189 (198)
T TIGR01428 152 QVYQLALEALGVPPDEVLFVASNPWDLGGAKKFGFKTA 189 (198)
T ss_pred HHHHHHHHHhCCChhhEEEEeCCHHHHHHHHHCCCcEE
Confidence 22244555565557789999999999999999988643
No 114
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=96.92 E-value=0.0024 Score=66.64 Aligned_cols=101 Identities=15% Similarity=0.107 Sum_probs=70.8
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+.... ..++.+++... .+-.|
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~iv~s~~~~~----------------~KP~p 152 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHL----DLLLSTHTFGY----------------PKEDQ 152 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHC----CEEEEeeeCCC----------------CCCCH
Confidence 67899999999999999999999999888888888888876532 11222211110 01123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee--EEecC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG--IAMGS 712 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg--Ia~g~ 712 (992)
+-=..+.+.+.-..+.+++|||+.+|+.+-++||+. +++.+
T Consensus 153 ~~~~~~~~~~~~~p~~~l~igDs~~di~aA~~aG~~~~~~v~~ 195 (224)
T PRK14988 153 RLWQAVAEHTGLKAERTLFIDDSEPILDAAAQFGIRYCLGVTN 195 (224)
T ss_pred HHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHcCCeEEEEEeC
Confidence 323344455555567899999999999999999996 34543
No 115
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.91 E-value=0.0015 Score=62.17 Aligned_cols=105 Identities=19% Similarity=0.108 Sum_probs=73.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC----CCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG----AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g----i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.++|+-++.++.+++.+++++++|+....-...+-+.++ |....+..+...+..+.. ...++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~dg~-------------h~i~~~ 139 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHIDGQ-------------HSIKYT 139 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcCCCc-------------eeeecC
Confidence 578999999999999999999999998888888877766 222111111111110000 000111
Q ss_pred ec--ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 668 RV--EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 668 r~--~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
.- -..+|...|+.+++..+.+.++|||+.|++|-+.+|+=.|
T Consensus 140 ~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 140 DDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred CccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 11 1247999999999999999999999999999888877665
No 116
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=96.82 E-value=0.0044 Score=58.72 Aligned_cols=93 Identities=18% Similarity=0.210 Sum_probs=66.8
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCC--------HHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcc
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDN--------KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~--------~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (992)
-++.|++.++++.|+++|++++++|+.. ...+..+.+.+|+.... ....+.
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~~~-----~~~~~~---------------- 82 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPIDV-----LYACPH---------------- 82 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCEEE-----EEECCC----------------
Confidence 3678999999999999999999999998 77788888888875311 001110
Q ss_pred eeEEeecChhhHHHHHHHHh-hcCCEEEEEcC-CcCCHHHHhhCCee
Q 001949 663 MALFTRVEPSHKRMLVEALQ-NQNEVVAMTGD-GVNDAPALKKADIG 707 (992)
Q Consensus 663 ~~v~~r~~p~~K~~iv~~l~-~~~~~v~~iGD-g~ND~~~l~~A~vg 707 (992)
..+-.|+-=..+++.++ -..+.++|||| ..+|+.+-+.|++-
T Consensus 83 ---~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~ 126 (132)
T TIGR01662 83 ---CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLA 126 (132)
T ss_pred ---CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCe
Confidence 00122333345556663 55678999999 69999999998874
No 117
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.78 E-value=0.0039 Score=68.56 Aligned_cols=109 Identities=15% Similarity=0.050 Sum_probs=77.5
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC-CccccccccccchhhhcCCHHHHHHHhcceeEE
Q 001949 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (992)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (992)
...+++.+++.++++.|++.|++++++||+....+..+.+.+|+.. .... +...+... ..+... --
T Consensus 183 ~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~----i~~~~~~~--------~~~~~~-~~ 249 (300)
T PHA02530 183 VKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD----LIGRPPDM--------HFQREQ-GD 249 (300)
T ss_pred cccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh----hhCCcchh--------hhcccC-CC
Confidence 3568899999999999999999999999999999999999999875 2211 11111000 000000 00
Q ss_pred eecChhhHHHHHHHHhh-cCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 667 TRVEPSHKRMLVEALQN-QNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 667 ~r~~p~~K~~iv~~l~~-~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
.+-.|+-+...++.+.. ....++|+||..+|+.+-+.|++-..
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~i 293 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLECW 293 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeEE
Confidence 13456677777776644 35789999999999999999998753
No 118
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=96.77 E-value=0.0067 Score=65.82 Aligned_cols=119 Identities=19% Similarity=0.218 Sum_probs=77.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|++.|+++.++|+.+......+-+..+....... . ..+.+++.. ..+-.|
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~-~-~~v~~~~~~----------------~~KP~p 205 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQG-L-DVFAGDDVP----------------KKKPDP 205 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCc-e-EEEeccccC----------------CCCCCH
Confidence 5789999999999999999999999988888777665532211100 0 011111110 012233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec-CC--cHHHHhccCeeecCC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG-SG--TAVAKSASDMVLADD 728 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g-~~--~~~~~~~ad~vl~~~ 728 (992)
+-=..+++.+.-....+++|||+.+|+.+-+.||+....- .+ .......+|+++.+-
T Consensus 206 ~~~~~a~~~~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~~~ 265 (286)
T PLN02779 206 DIYNLAAETLGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFDCL 265 (286)
T ss_pred HHHHHHHHHhCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEECCh
Confidence 3445566666666778999999999999999999876532 22 222224578887543
No 119
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=96.76 E-value=0.0069 Score=70.71 Aligned_cols=121 Identities=10% Similarity=0.136 Sum_probs=81.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+..... .++++++... +..|
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~----~i~~~d~v~~-----------------~~kP 388 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVT----ETFSIEQINS-----------------LNKS 388 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcc----eeEecCCCCC-----------------CCCc
Confidence 678999999999999999999999999999999999999875431 1222221110 1123
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee-EEec--CCcHHHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG-IAMG--SGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg-Ia~g--~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+--...++.+ ..+.+++|||+.+|+.+-+.|++- |++. ...+.....+|+++. ++..+...+
T Consensus 389 ~~~~~al~~l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 389 DLVKSILNKY--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred HHHHHHHHhc--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 3222223322 246799999999999999999984 3443 222222345788875 455555554
No 120
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.62 E-value=0.0035 Score=63.32 Aligned_cols=95 Identities=16% Similarity=0.157 Sum_probs=63.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++|+.|+++|+++.++|+... +....+.+|+.... ..++.+.+.. ..+-.|
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f----~~~~~~~~~~----------------~~kp~p 144 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYF----DAIVDPAEIK----------------KGKPDP 144 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhC----cEEEehhhcC----------------CCCCCh
Confidence 6789999999999999999999997543 45677888876443 1122222111 011223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
+-=..+++.+.-..+.+++|||+.+|+.+-+.|++-.
T Consensus 145 ~~~~~~~~~~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 145 EIFLAAAEGLGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred HHHHHHHHHcCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 3223444444444567999999999999999998853
No 121
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.62 E-value=0.0089 Score=59.02 Aligned_cols=114 Identities=11% Similarity=0.033 Sum_probs=74.1
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHH
Q 001949 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (992)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (992)
+.......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+.+.+|+........- ...+
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~~~----~~~F---------- 98 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTVPM----HSLF---------- 98 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcccH----HHhc----------
Confidence 33445555556678999999999999999999999987 88888999999998621100000 0000
Q ss_pred HhcceeEEeecChhhH--HHHHHHHhh------cCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 659 ALQHMALFTRVEPSHK--RMLVEALQN------QNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 659 ~~~~~~v~~r~~p~~K--~~iv~~l~~------~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
+..+.++..+..| ..+.+.+.+ ..+.+++|||+..|+.+-++|++-...
T Consensus 99 ---d~iv~~~~~~~~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 99 ---DDRIEIYKPNKAKQLEMILQKVNKVDPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred ---eeeeeccCCchHHHHHHHHHHhhhcccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 0011111111111 234454442 257899999999999999999987653
No 122
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=96.61 E-value=0.014 Score=58.74 Aligned_cols=125 Identities=21% Similarity=0.222 Sum_probs=71.7
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhh--hcCCHH
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEF--EELPAM 654 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~--~~~~~~ 654 (992)
.+.|++.+++++|+++|+++.++|+.+. .....+.+..|+... .++..... +..
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~f~------~i~~~~~~~~~~~--- 99 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGRLD------GIYYCPHHPEDGC--- 99 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCccc------eEEECCCCCCCCC---
Confidence 4679999999999999999999998763 111223334454210 01000000 000
Q ss_pred HHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-ecCC--cH-HHHhcc--CeeecCC
Q 001949 655 QQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSG--TA-VAKSAS--DMVLADD 728 (992)
Q Consensus 655 ~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~g~~--~~-~~~~~a--d~vl~~~ 728 (992)
-..+-.|+--..+++.+.-..+.++||||+.+|+.+-+.|++..- +..+ .. .....+ |+++.+
T Consensus 100 ----------~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~- 168 (181)
T PRK08942 100 ----------DCRKPKPGMLLSIAERLNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDS- 168 (181)
T ss_pred ----------cCCCCCHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecC-
Confidence 001223444455566666567889999999999999999997532 2222 11 122234 777643
Q ss_pred CchHHHHHH
Q 001949 729 NFATIVAAV 737 (992)
Q Consensus 729 ~~~~i~~~i 737 (992)
+..+...+
T Consensus 169 -l~el~~~l 176 (181)
T PRK08942 169 -LADLPQAL 176 (181)
T ss_pred -HHHHHHHH
Confidence 55555544
No 123
>PLN02940 riboflavin kinase
Probab=96.59 E-value=0.007 Score=68.46 Aligned_cols=116 Identities=13% Similarity=0.089 Sum_probs=76.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH-HhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH-KIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~-~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+.... ..++.+++.. ..+-.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~F----d~ii~~d~v~----------------~~KP~ 152 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESF----SVIVGGDEVE----------------KGKPS 152 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhC----CEEEehhhcC----------------CCCCC
Confidence 467999999999999999999999999888877665 67775432 1222222111 01122
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE-ecCC--cHHHHhccCeeecC
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA-MGSG--TAVAKSASDMVLAD 727 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa-~g~~--~~~~~~~ad~vl~~ 727 (992)
|+-=..+++.+.-..+.+++|||+.+|+.+-+.||+... +..+ .......+|.++.+
T Consensus 153 p~~~~~a~~~lgv~p~~~l~VGDs~~Di~aA~~aGi~~I~v~~g~~~~~~~~~ad~~i~s 212 (382)
T PLN02940 153 PDIFLEAAKRLNVEPSNCLVIEDSLPGVMAGKAAGMEVIAVPSIPKQTHLYSSADEVINS 212 (382)
T ss_pred HHHHHHHHHHcCCChhHEEEEeCCHHHHHHHHHcCCEEEEECCCCcchhhccCccEEeCC
Confidence 333345555565557889999999999999999998754 4322 22223345665533
No 124
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.58 E-value=0.0033 Score=62.58 Aligned_cols=98 Identities=20% Similarity=0.314 Sum_probs=72.3
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.++.|++.+.+++|+++|++++++|+.+........+.+|+.... ..++..++.... +-.
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f----~~i~~~~~~~~~----------------Kp~ 135 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYF----DEIISSDDVGSR----------------KPD 135 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGC----SEEEEGGGSSSS----------------TTS
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccc----ccccccchhhhh----------------hhH
Confidence 467899999999999999999999999999999999999987432 122222211110 122
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
|+-=..+++.++-..+.+++|||+..|+.+-+.||+--
T Consensus 136 ~~~~~~~~~~~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 136 PDAYRRALEKLGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHHHHTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 33334566666666788999999999999999998753
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.53 E-value=0.0044 Score=62.60 Aligned_cols=96 Identities=19% Similarity=0.162 Sum_probs=64.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
-++.|++.++++.|+++|+++.++|+. ..+..+.+.+|+..... .++...+... .+-.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~----~v~~~~~~~~----------------~kp~ 144 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFD----AIVDADEVKE----------------GKPH 144 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCC----EeeehhhCCC----------------CCCC
Confidence 468999999999999999999999987 55777788888765321 1111111100 0111
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
|+-=..+.+.+....+.+++|||+.+|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 145 PETFLLAAELLGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred hHHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 22122334444444578999999999999999998853
No 126
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.52 E-value=0.0077 Score=60.64 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=66.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.++.|+++|++++++|+..... ..+..++|+..... .++.+++.. ..+-.|
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~----~i~~~~~~~----------------~~KP~~ 143 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFD----VVIFSGDVG----------------RGKPDP 143 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCC----EEEEcCCCC----------------CCCCCH
Confidence 678999999999999999999999988887 55555688764321 111111110 011223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCee
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIG 707 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vg 707 (992)
+--..+.+.+......++++||+..|+.+-+++|+-
T Consensus 144 ~~~~~~~~~~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 144 DIYLLALKKLGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHHHHHHHcCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 333455555555678899999999999999999873
No 127
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.47 E-value=0.022 Score=56.27 Aligned_cols=37 Identities=16% Similarity=0.291 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCC
Q 001949 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAF 632 (992)
Q Consensus 596 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~ 632 (992)
.+.+.+.+|+++|++|+.+|......-..+-+.+|+.
T Consensus 27 pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 27 PAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred ccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 3567899999999999999999999999999999987
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.45 E-value=0.0095 Score=62.28 Aligned_cols=114 Identities=15% Similarity=0.125 Sum_probs=75.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+.+++|+++ ++++++|+-....+..+.+++|+..... .++...+... .+-.|
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd----~i~~~~~~~~----------------~KP~~ 155 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFD----DIFVSEDAGI----------------QKPDK 155 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcC----EEEEcCccCC----------------CCCCH
Confidence 5789999999999999 9999999999999999999999865431 1221111100 01222
Q ss_pred hhHHHHHHHH-hhcCCEEEEEcCCc-CCHHHHhhCCeeE-Eec--CCcHHHHhccCeeec
Q 001949 672 SHKRMLVEAL-QNQNEVVAMTGDGV-NDAPALKKADIGI-AMG--SGTAVAKSASDMVLA 726 (992)
Q Consensus 672 ~~K~~iv~~l-~~~~~~v~~iGDg~-ND~~~l~~A~vgI-a~g--~~~~~~~~~ad~vl~ 726 (992)
+-=...++.+ .-..+.+++|||+. +|+.+-+.+|+-. .+. ..+......+|+++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~~~~~~~~~~~ 215 (224)
T TIGR02254 156 EIFNYALERMPKFSKEEVLMIGDSLTADIKGGQNAGLDTCWMNPDMHPNPDDIIPTYEIR 215 (224)
T ss_pred HHHHHHHHHhcCCCchheEEECCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCceEEC
Confidence 2224455555 44567899999998 8999999999733 332 222222234566653
No 129
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.37 E-value=0.015 Score=58.29 Aligned_cols=124 Identities=16% Similarity=0.114 Sum_probs=66.6
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHH---------------HHHHHHHHhCCCCCccccccccccchhhhcCCHHHHH
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS---------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQT 657 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~---------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~ 657 (992)
+.|++.++|++|+++|+++.++|.-+.. ....+..+.|+.............+ .....+.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~~~~~~~--~~~~~~~--- 101 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDLDGIYYCPHHPEG--VEEFRQV--- 101 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCccEEEECCCCCcc--cccccCC---
Confidence 5789999999999999999999987641 1112333333331100000000000 0000000
Q ss_pred HHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE--EecCCc---HHHHhccCeeecC
Q 001949 658 VALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI--AMGSGT---AVAKSASDMVLAD 727 (992)
Q Consensus 658 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI--a~g~~~---~~~~~~ad~vl~~ 727 (992)
.-..+-.|+-=..+.+.++-....++||||..+|+.+-++|++.. .+..+. ......+|+++.+
T Consensus 102 ------~~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~ 170 (176)
T TIGR00213 102 ------CDCRKPKPGMLLQARKELHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNS 170 (176)
T ss_pred ------CCCCCCCHHHHHHHHHHcCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEecc
Confidence 000112233333444445445678999999999999999999853 443222 1222347888753
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.35 E-value=0.0087 Score=59.43 Aligned_cols=89 Identities=13% Similarity=0.139 Sum_probs=64.1
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCC-HHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeec
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDN-KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~-~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (992)
..+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+.... + ..+-
T Consensus 42 ~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~~~---------~--------------------~~KP 92 (170)
T TIGR01668 42 NEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPVLP---------H--------------------AVKP 92 (170)
T ss_pred CCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEEEc---------C--------------------CCCC
Confidence 3678999999999999999999999988 67777788888764210 0 0012
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCeeE
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGI 708 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgI 708 (992)
.|+-=..+++.+....+.++||||.. .|..+-+.|++-.
T Consensus 93 ~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~ 132 (170)
T TIGR01668 93 PGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYT 132 (170)
T ss_pred ChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeE
Confidence 23322334444444467899999998 7999999999854
No 131
>PRK06769 hypothetical protein; Validated
Probab=96.35 E-value=0.0073 Score=60.19 Aligned_cols=112 Identities=14% Similarity=-0.002 Sum_probs=68.8
Q ss_pred CCcEEEEEecccC----CCcHHHHHHHHHHHhCCcEEEEEcCCCHH--------HHHHHHHHhCCCCCccccccccccch
Q 001949 579 KDLTFIGLVGMLD----PPREEVKNAMLSCMTAGIRVIVVTGDNKS--------TAESICHKIGAFDHLVDFVGRSYTAS 646 (992)
Q Consensus 579 ~~l~~lG~i~~~d----~~~~~~~~~i~~l~~~gi~v~~~TGd~~~--------~a~~ia~~~gi~~~~~~~~~~~~~~~ 646 (992)
.|.++.|-..+.+ ++.|++.+++++|++.|+++.++|+.... ......+..|+...... ....++
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~~~~~~---~~~~~~ 87 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFDDIYLC---PHKHGD 87 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcCEEEEC---cCCCCC
Confidence 4555555433332 37899999999999999999999987641 12333445555432100 000000
Q ss_pred hhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 647 EFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
+.. ..+-.|+-=..+++.+....+.+++|||+.+|+.+-++|++-..
T Consensus 88 ~~~----------------~~KP~p~~~~~~~~~l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 88 GCE----------------CRKPSTGMLLQAAEKHGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred CCC----------------CCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 000 01223333455566665556789999999999999999998665
No 132
>PRK09449 dUMP phosphatase; Provisional
Probab=96.30 E-value=0.014 Score=61.06 Aligned_cols=123 Identities=12% Similarity=0.128 Sum_probs=76.9
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+ +|+++.++|+.....+...-+.+|+.... ..++..++... .+-.|
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~~----------------~KP~p 153 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYF----DLLVISEQVGV----------------AKPDV 153 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHc----CEEEEECccCC----------------CCCCH
Confidence 46899999999999 68999999999988888888888886532 11211111100 01122
Q ss_pred hhHHHHHHHHhhc-CCEEEEEcCCc-CCHHHHhhCCeeE-Eec-CCcH-HHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQ-NEVVAMTGDGV-NDAPALKKADIGI-AMG-SGTA-VAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~-~~~v~~iGDg~-ND~~~l~~A~vgI-a~g-~~~~-~~~~~ad~vl~~~~~~~i~~~i 737 (992)
+-=..+++.+.-. .+.+++|||+. +|+.+-+.||+-. .+. .+.. .....+|+++.+ +..+...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~~--~~el~~~l 222 (224)
T PRK09449 154 AIFDYALEQMGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVSS--LSELEQLL 222 (224)
T ss_pred HHHHHHHHHcCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEECC--HHHHHHHH
Confidence 2223444555432 35799999998 7999999999853 343 2211 111246777643 55555443
No 133
>PLN02811 hydrolase
Probab=96.05 E-value=0.019 Score=59.92 Aligned_cols=99 Identities=14% Similarity=0.142 Sum_probs=62.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH-HHHHhCCCCCccccccccccch--hhhcCCHHHHHHHhcceeEEe
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES-ICHKIGAFDHLVDFVGRSYTAS--EFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~ 667 (992)
-++.|++.+.|+.|+++|+++.++||-....... ..+..++.... ..+++++ +... .
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f----~~i~~~~~~~~~~----------------~ 136 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLM----HHVVTGDDPEVKQ----------------G 136 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhC----CEEEECChhhccC----------------C
Confidence 3578999999999999999999999987654332 22222332211 1112222 1100 0
Q ss_pred ecChhhHHHHHHHHh---hcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 668 RVEPSHKRMLVEALQ---NQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 668 r~~p~~K~~iv~~l~---~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
+-.|+-=...++.+. -..+.+++|||+..|+.+-+.||+-..
T Consensus 137 KP~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 137 KPAPDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred CCCcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 123333345555554 345789999999999999999998654
No 134
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.01 E-value=0.016 Score=59.51 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=63.1
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.|+++|+++.++|+-... .....+.+|+..... .++...+.. ..+-.|
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd----~i~~s~~~~----------------~~KP~~ 163 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFD----FVVTSYEVG----------------AEKPDP 163 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcc----eEEeecccC----------------CCCCCH
Confidence 57899999999999999999999986654 466777788754321 111111110 001223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCee
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIG 707 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vg 707 (992)
+-=..+++.+.-....+++|||+. +|+.+-++||+-
T Consensus 164 ~~~~~~~~~~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 164 KIFQEALERAGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred HHHHHHHHHcCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 222344455544567899999997 899999998864
No 135
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=95.93 E-value=0.015 Score=56.18 Aligned_cols=101 Identities=18% Similarity=0.197 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCH---------------HHHHHHHHHhCCCCCccccccccccchhhhcCCHHHH
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNK---------------STAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQ 656 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~---------------~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 656 (992)
++.|++.++++.|+++|+++.++|+... ..+..+.+.+|+..... ... .....+...
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-~~~-~~~~~~~~~------ 98 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVDGV-LFC-PHHPADNCS------ 98 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCceeEE-EEC-CCCCCCCCC------
Confidence 4789999999999999999999998763 44556677788752100 000 000000000
Q ss_pred HHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 657 TVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 657 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
..+-.|+-=..+++.+.-..+.+++|||...|+.+-+.+++-..
T Consensus 99 ---------~~KP~~~~~~~~~~~~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 99 ---------CRKPKPGLILEALKRLGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred ---------CCCCCHHHHHHHHHHcCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 00112222233444444446789999999999999999987543
No 136
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=95.82 E-value=0.032 Score=53.03 Aligned_cols=85 Identities=22% Similarity=0.323 Sum_probs=65.9
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+..|++++=+++++++|+++.++|..++..+...++.+|+... +--..
T Consensus 45 ~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi-------------------------------~~A~K 93 (175)
T COG2179 45 PDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFI-------------------------------YRAKK 93 (175)
T ss_pred CCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCcee-------------------------------ecccC
Confidence 45889999999999999999999999999999999999998752 22233
Q ss_pred hhhH--HHHHHHHhhcCCEEEEEcCC-cCCHHHHhhCCe
Q 001949 671 PSHK--RMLVEALQNQNEVVAMTGDG-VNDAPALKKADI 706 (992)
Q Consensus 671 p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~A~v 706 (992)
|-.+ .+.++.++-..+.|+||||. ..|+-+=+.|++
T Consensus 94 P~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 94 PFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred ccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCc
Confidence 3322 34555555567899999998 478877666665
No 137
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.80 E-value=0.03 Score=57.84 Aligned_cols=100 Identities=12% Similarity=0.139 Sum_probs=69.9
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC---CCCCccccccccccchhhhcCCHHHHHHHhcceeE
Q 001949 589 MLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG---AFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (992)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g---i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (992)
++-++.|++.+++++|+++|+++.++|..+......+.+..+ +...... .++ ..+
T Consensus 92 ~~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~f~~----~fd------------------~~~ 149 (220)
T TIGR01691 92 LTSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPYFSG----YFD------------------TTV 149 (220)
T ss_pred cccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhhcce----EEE------------------eCc
Confidence 345789999999999999999999999998887776666542 2221100 000 001
Q ss_pred EeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 666 FTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
..+-.|+-=..+++.+.-..+.++++||...|+.+-++||+-...
T Consensus 150 g~KP~p~~y~~i~~~lgv~p~e~lfVgDs~~Di~AA~~AG~~ti~ 194 (220)
T TIGR01691 150 GLKTEAQSYVKIAGQLGSPPREILFLSDIINELDAARKAGLHTGQ 194 (220)
T ss_pred ccCCCHHHHHHHHHHhCcChhHEEEEeCCHHHHHHHHHcCCEEEE
Confidence 122344444566666666678899999999999999999997653
No 138
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.68 E-value=0.049 Score=57.71 Aligned_cols=87 Identities=15% Similarity=0.188 Sum_probs=61.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEE
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALF 666 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 666 (992)
..++-|++.+.++.+++.|+++.++|++.... +....++.|+.....+ .++
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d--------------------------~ll 169 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEE--------------------------HLL 169 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcc--------------------------eEE
Confidence 45678999999999999999999999988443 3455667787642211 133
Q ss_pred eecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHh
Q 001949 667 TRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702 (992)
Q Consensus 667 ~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~ 702 (992)
.|-....|..-.+.+.+.-.+++++||..+|.....
T Consensus 170 lr~~~~~K~~rr~~I~~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 170 LKKDKSSKESRRQKVQKDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred eCCCCCCcHHHHHHHHhcCCEEEEECCCHHHhhhhh
Confidence 333333455566666565667999999999996543
No 139
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=95.63 E-value=0.031 Score=52.57 Aligned_cols=88 Identities=6% Similarity=0.037 Sum_probs=59.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCC-CHHHHHHHHHHhC-------CCCCccccccccccchhhhcCCHHHHHHHhcce
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGD-NKSTAESICHKIG-------AFDHLVDFVGRSYTASEFEELPAMQQTVALQHM 663 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd-~~~~a~~ia~~~g-------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 663 (992)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..| +.... ..++.+.+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~~~~i~~l~~~f----~~~~~~~~---------------- 88 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFEDFGIIFPLAEYF----DPLTIGYW---------------- 88 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccccccchhhHhhh----hhhhhcCC----------------
Confidence 78999999999999999999999999 7777777777766 21111 00111100
Q ss_pred eEEeecChhhHHHHHHHHh--hcCCEEEEEcCCcCCHHHHhh
Q 001949 664 ALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGVNDAPALKK 703 (992)
Q Consensus 664 ~v~~r~~p~~K~~iv~~l~--~~~~~v~~iGDg~ND~~~l~~ 703 (992)
.-.|+.=..+++.++ -..+.++++||...|...++.
T Consensus 89 ----~pkp~~~~~a~~~lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 89 ----LPKSPRLVEIALKLNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred ----CcHHHHHHHHHHHhcCCCCcceEEEECCCHhHHHHHHh
Confidence 011333344555555 556899999999999877664
No 140
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=95.60 E-value=0.047 Score=56.52 Aligned_cols=104 Identities=25% Similarity=0.326 Sum_probs=67.3
Q ss_pred CCcHHHHHHHHHH--HhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccch-hhhcCCHHHHHHHhcceeEEee
Q 001949 592 PPREEVKNAMLSC--MTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTAS-EFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 592 ~~~~~~~~~i~~l--~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~r 668 (992)
|+.|+.+++++.+ ++.|+.+.++|.-|...-..+-+.-|+...... +++.. .++. .. .+.-......-+.+
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~----I~TNpa~~~~-~G-~l~v~pyh~h~C~~ 144 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE----IFTNPACFDA-DG-RLRVRPYHSHGCSL 144 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce----EEeCCceecC-Cc-eEEEeCccCCCCCc
Confidence 5778899999999 568999999999999999999999998754321 11111 0000 00 00000000012334
Q ss_pred cCh-hhHHHHHHHHhhc----C---CEEEEEcCCcCCH-HHH
Q 001949 669 VEP-SHKRMLVEALQNQ----N---EVVAMTGDGVNDA-PAL 701 (992)
Q Consensus 669 ~~p-~~K~~iv~~l~~~----~---~~v~~iGDg~ND~-~~l 701 (992)
+.| .=|..+++.+++. | ..|..||||.||. |++
T Consensus 145 C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~ 186 (234)
T PF06888_consen 145 CPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPAL 186 (234)
T ss_pred CCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCccc
Confidence 544 3688999888765 4 6999999999994 554
No 141
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.59 E-value=0.032 Score=54.39 Aligned_cols=90 Identities=19% Similarity=0.181 Sum_probs=60.0
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChh
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 672 (992)
..+++.+.++.|+++|+++.++|+.....+....+.. +.... ..++..++. ..+-.|+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~f----~~i~~~~~~-----------------~~Kp~~~ 122 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDYF----DLILGSDEF-----------------GAKPEPE 122 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhcC----cEEEecCCC-----------------CCCcCHH
Confidence 4478999999999999999999999999988887775 33321 111111100 0112233
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCC
Q 001949 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKAD 705 (992)
Q Consensus 673 ~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~ 705 (992)
-=..+.+.+.-.. .+++|||+.+|+.+-++|+
T Consensus 123 ~~~~~~~~~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 123 IFLAALESLGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred HHHHHHHHcCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 3333444444445 8999999999999988775
No 142
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.53 E-value=0.068 Score=54.96 Aligned_cols=81 Identities=16% Similarity=0.127 Sum_probs=56.6
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH---HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST---AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~---a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
-|.-|++.++++.++++|++|+++|||.... +..--++.|+.... . ++-
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~~~~----~------------------------LiL 170 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFTGWK----H------------------------LIL 170 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCCCcC----e------------------------eee
Confidence 4788999999999999999999999999765 33444556765321 1 222
Q ss_pred ecC-------hhhHHHHHHHHhhcCC-EEEEEcCCcCCHH
Q 001949 668 RVE-------PSHKRMLVEALQNQNE-VVAMTGDGVNDAP 699 (992)
Q Consensus 668 r~~-------p~~K~~iv~~l~~~~~-~v~~iGDg~ND~~ 699 (992)
|.. -.-|.+.-+.+.+.|+ +++.+||..+|..
T Consensus 171 R~~~d~~~~~~~yKs~~R~~l~~~GYrIv~~iGDq~sDl~ 210 (229)
T TIGR01675 171 RGLEDSNKTVVTYKSEVRKSLMEEGYRIWGNIGDQWSDLL 210 (229)
T ss_pred cCCCCCCchHhHHHHHHHHHHHhCCceEEEEECCChHHhc
Confidence 210 1126666667776765 6688999999973
No 143
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.53 E-value=0.012 Score=56.84 Aligned_cols=97 Identities=14% Similarity=0.039 Sum_probs=66.9
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeec
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRV 669 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (992)
.-+++|++.+.++.|+ .++++.++|+-+...+..+.+.+|+..... ..++..++.. +.
T Consensus 43 ~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f---~~i~~~~d~~------------------~~ 100 (148)
T smart00577 43 YVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFG---YRRLFRDECV------------------FV 100 (148)
T ss_pred EEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEe---eeEEECcccc------------------cc
Confidence 3457999999999999 579999999999999999999998753211 1122221111 11
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
.|. =...++.+....+.+++|||..+|..+-++|+|-|.
T Consensus 101 KP~-~~k~l~~l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 101 KGK-YVKDLSLLGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred CCe-EeecHHHcCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 122 112234444457899999999999999877866664
No 144
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.46 E-value=0.029 Score=54.98 Aligned_cols=97 Identities=13% Similarity=0.077 Sum_probs=61.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCC---------------HHHHHHHHHHhCCCCCcccccccccc----chhhhcCC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDN---------------KSTAESICHKIGAFDHLVDFVGRSYT----ASEFEELP 652 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~---------------~~~a~~ia~~~gi~~~~~~~~~~~~~----~~~~~~~~ 652 (992)
++-|++.+++++|+++|+++.++|... ...+..+.+.+|+... ...+. .++..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~fd-----~ii~~~~~~~~~~~--- 100 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGIIFD-----DVLICPHFPDDNCD--- 100 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCcee-----EEEECCCCCCCCCC---
Confidence 467899999999999999999999852 3456667777787510 01111 01000
Q ss_pred HHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 653 AMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 653 ~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
+..-.|+-=..+++.+.-....+++|||+.+|..+-+.|++-..
T Consensus 101 -------------~~KP~~~~~~~~~~~~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 101 -------------CRKPKIKLLEPYLKKNLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -------------CCCCCHHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00011121223333333335679999999999999999998755
No 145
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.36 E-value=0.065 Score=68.63 Aligned_cols=135 Identities=12% Similarity=0.149 Sum_probs=91.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
.+.|++.+.+++|+++|+++.++|+.....+....+.+|+..... ..++..++... .+-.|
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~F---d~iv~~~~~~~----------------~KP~P 221 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMF---DAIVSADAFEN----------------LKPAP 221 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHC---CEEEECccccc----------------CCCCH
Confidence 367999999999999999999999999999999889999852111 11222221111 11223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE-EecC---CcHHHHhccCeeecCCCchHHHHHHHHHHHHHH
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI-AMGS---GTAVAKSASDMVLADDNFATIVAAVAEGRAIYN 745 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI-a~g~---~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~ 745 (992)
+-=...++.++-..+.+++|||..+|+.+-++|++-. ++.. ..+.....+|+++.+....++..++..|-..+.
T Consensus 222 e~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~ 299 (1057)
T PLN02919 222 DIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATP 299 (1057)
T ss_pred HHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCC
Confidence 3334555666656788999999999999999999843 3432 223334567888877666566666655544333
No 146
>PLN02423 phosphomannomutase
Probab=95.02 E-value=0.17 Score=53.48 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=35.4
Q ss_pred hhHHHHHHHHhhcCCEEEEEcC----CcCCHHHHhh-CCeeEEecCC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGD----GVNDAPALKK-ADIGIAMGSG 713 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGD----g~ND~~~l~~-A~vgIa~g~~ 713 (992)
.+|+..++.|+ ....|+++|| |.||.+||+. -=.|+.+.+-
T Consensus 188 vnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~ 233 (245)
T PLN02423 188 WDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSP 233 (245)
T ss_pred CCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCH
Confidence 37999999999 7889999999 8999999996 6678887543
No 147
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=94.99 E-value=0.068 Score=52.72 Aligned_cols=94 Identities=12% Similarity=0.080 Sum_probs=59.5
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHH------------HHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHh
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS------------TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~------------~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (992)
+-|++.+++++|+++|+++.++|..... .+..+.+.+|+.. . .++.+...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~-~-----~ii~~~~~------------ 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI-Q-----VLAATHAG------------ 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE-E-----EEEecCCC------------
Confidence 4589999999999999999999976542 3556778888743 1 01111100
Q ss_pred cceeEEeecChhhHHHHHHHHh--hcCCEEEEEcCCc--------CCHHHHhhCCeeE
Q 001949 661 QHMALFTRVEPSHKRMLVEALQ--NQNEVVAMTGDGV--------NDAPALKKADIGI 708 (992)
Q Consensus 661 ~~~~v~~r~~p~~K~~iv~~l~--~~~~~v~~iGDg~--------ND~~~l~~A~vgI 708 (992)
....-.|+-=..+++.+. -..+.++||||.. +|..+-++|++-.
T Consensus 105 ----~~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 ----LYRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred ----CCCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000111222234444444 3346899999986 6999999888743
No 148
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.93 E-value=0.15 Score=53.90 Aligned_cols=93 Identities=13% Similarity=0.134 Sum_probs=60.8
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH--HHHHHhCCCC-CccccccccccchhhhcCCHHHHHHHhc
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE--SICHKIGAFD-HLVDFVGRSYTASEFEELPAMQQTVALQ 661 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~--~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (992)
|.+.-.+.+-|++.+++++|+++|+++.++|+.....+. ...+++|+.. .. ..
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~----~~-------------------- 72 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGINADLP----EM-------------------- 72 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCCcccc----ce--------------------
Confidence 445556788999999999999999999999996655444 5667888864 22 11
Q ss_pred ceeEEeecChhhHHHHHHHHhh---cCCEEEEEcCCcCCHHHHhhCC
Q 001949 662 HMALFTRVEPSHKRMLVEALQN---QNEVVAMTGDGVNDAPALKKAD 705 (992)
Q Consensus 662 ~~~v~~r~~p~~K~~iv~~l~~---~~~~v~~iGDg~ND~~~l~~A~ 705 (992)
|++.. ......+.+.+++ .+..+.++||+..|...+..++
T Consensus 73 ---Ii~s~-~~~~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~ 115 (242)
T TIGR01459 73 ---IISSG-EIAVQMILESKKRFDIRNGIIYLLGHLENDIINLMQCY 115 (242)
T ss_pred ---EEccH-HHHHHHHHhhhhhccCCCceEEEeCCcccchhhhcCCC
Confidence 11110 0011122222222 3567999999999998886543
No 149
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=94.78 E-value=0.065 Score=59.28 Aligned_cols=101 Identities=15% Similarity=0.021 Sum_probs=61.3
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCC---------------CHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHH
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGD---------------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQ 655 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd---------------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 655 (992)
-++.|++.+++++|+++|+++.++|+- ....+..+.+..|+... ...+......+
T Consensus 29 ~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~fd-----~i~i~~~~~sd----- 98 (354)
T PRK05446 29 LAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKFD-----EVLICPHFPED----- 98 (354)
T ss_pred ceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCcee-----eEEEeCCcCcc-----
Confidence 468899999999999999999999983 23345566777776421 00010000000
Q ss_pred HHHHhcceeEEee-cChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 656 QTVALQHMALFTR-VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 656 ~~~~~~~~~v~~r-~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
...+| ..|+-=..+.+.+......++||||+.+|..+-+.|++-..
T Consensus 99 --------~~~~rKP~p~~l~~a~~~l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 99 --------NCSCRKPKTGLVEEYLAEGAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred --------cCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 00011 11211122223333345789999999999999999998654
No 150
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.73 E-value=0.073 Score=58.88 Aligned_cols=94 Identities=9% Similarity=0.126 Sum_probs=68.6
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH----hCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK----IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~----~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +|+...... +....
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~f~~-------------------------~~~~~ 85 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAEDFDA-------------------------RSINW 85 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHHeeE-------------------------EEEec
Confidence 4579999999999999999999999999999999888 776543211 00011
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
...|+.-..+.+.+.-....+++|||...|+.+.+++...+.+
T Consensus 86 ~pk~~~i~~~~~~l~i~~~~~vfidD~~~d~~~~~~~lp~~~~ 128 (320)
T TIGR01686 86 GPKSESLRKIAKKLNLGTDSFLFIDDNPAERANVKITLPVKTL 128 (320)
T ss_pred CchHHHHHHHHHHhCCCcCcEEEECCCHHHHHHHHHHCCCCcc
Confidence 1223333344444444467899999999999999998887654
No 151
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=94.69 E-value=0.043 Score=56.73 Aligned_cols=98 Identities=12% Similarity=0.094 Sum_probs=60.4
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH--HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKST--AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~--a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
-++.|++.+.++.|+++|+++.++|+..... ........++.... ..++...+.. ..+
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~----------------~~K 152 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALF----DAVVESCLEG----------------LRK 152 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhC----CEEEEeeecC----------------CCC
Confidence 3578999999999999999999999875433 22222233432221 0111110000 011
Q ss_pred cChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 669 VEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
-.|+-=..+++.++-..+.+++|||...|+.+-++||+-.
T Consensus 153 P~p~~~~~~~~~~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 153 PDPRIYQLMLERLGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred CCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 2233334445555555678999999999999999999854
No 152
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.59 E-value=0.073 Score=54.43 Aligned_cols=98 Identities=15% Similarity=0.114 Sum_probs=62.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
++.|++.++++.|+++|+++.++|+-+.......... .++.... +.++...+... .+-.
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~f----d~v~~s~~~~~----------------~KP~ 143 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAA----DHIYLSQDLGM----------------RKPE 143 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhc----CEEEEecccCC----------------CCCC
Confidence 4789999999999999999999999876654433222 2332211 11111111110 0122
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
|+-=..+++.+....+.+++|||+..|+.+-++||+-..
T Consensus 144 p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 144 ARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred HHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 333345556665567889999999999999999998543
No 153
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=94.54 E-value=0.17 Score=62.94 Aligned_cols=51 Identities=12% Similarity=0.133 Sum_probs=39.2
Q ss_pred CCCcEEEEEecccCCCcHHHHHHHHHH-HhCCcEEEEEcCCCHHHHHHHHHH
Q 001949 578 EKDLTFIGLVGMLDPPREEVKNAMLSC-MTAGIRVIVVTGDNKSTAESICHK 628 (992)
Q Consensus 578 e~~l~~lG~i~~~d~~~~~~~~~i~~l-~~~gi~v~~~TGd~~~~a~~ia~~ 628 (992)
..|.+++-.....-.+.+++.+++++| ++.|+.|+++|||...+.......
T Consensus 602 DyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~ 653 (854)
T PLN02205 602 DYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSP 653 (854)
T ss_pred ecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCC
Confidence 446666644333346778999999997 788999999999999998877644
No 154
>PLN03017 trehalose-phosphatase
Probab=94.50 E-value=0.46 Score=52.44 Aligned_cols=48 Identities=15% Similarity=0.096 Sum_probs=39.5
Q ss_pred CCCcEEEEEecccC--CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH
Q 001949 578 EKDLTFIGLVGMLD--PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (992)
Q Consensus 578 e~~l~~lG~i~~~d--~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia 626 (992)
..|.+++-++.-.| .+.+++.++|++|. +|++++++|||.......+.
T Consensus 117 D~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~ 166 (366)
T PLN03017 117 DYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFV 166 (366)
T ss_pred ecCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhh
Confidence 35777776665444 48899999999999 78999999999999988873
No 155
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=94.33 E-value=0.069 Score=47.69 Aligned_cols=89 Identities=18% Similarity=0.196 Sum_probs=55.5
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHhCCCCCccccccccccchhhhcCCHHHHHHHhc
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQ 661 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 661 (992)
|++...+++-|++.++|+.|+++|++++++|.....+...++ +.+|+..... .
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~----~-------------------- 62 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDED----E-------------------- 62 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GG----G--------------------
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcC----E--------------------
Confidence 444556788999999999999999999999998866655555 5566653211 1
Q ss_pred ceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCCcCCHHHHhhCCe
Q 001949 662 HMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVNDAPALKKADI 706 (992)
Q Consensus 662 ~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND~~~l~~A~v 706 (992)
++. |. ....+.+++ .+..|.++|.. .....++.+|+
T Consensus 63 ---i~t---s~--~~~~~~l~~~~~~~~v~vlG~~-~l~~~l~~~G~ 100 (101)
T PF13344_consen 63 ---IIT---SG--MAAAEYLKEHKGGKKVYVLGSD-GLREELREAGF 100 (101)
T ss_dssp ---EEE---HH--HHHHHHHHHHTTSSEEEEES-H-HHHHHHHHTTE
T ss_pred ---EEC---hH--HHHHHHHHhcCCCCEEEEEcCH-HHHHHHHHcCC
Confidence 221 11 223344444 47889999975 55666666654
No 156
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=93.96 E-value=0.068 Score=55.69 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=66.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++.| ++++.++|+.....+...-+..|+...... .++++++... .+-.|
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~---~v~~~~~~~~----------------~KP~p 145 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD---KLFSGYDIQR----------------WKPDP 145 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc---eEeeHHhcCC----------------CCCCh
Confidence 4568999999988 489999999998888888888888654311 1222221110 01223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
+-=..+.+.+.-..+.+++|||+.+|+.+-++||+.+..
T Consensus 146 ~~~~~a~~~~~~~p~~~l~igDs~~di~aA~~aG~~~i~ 184 (221)
T PRK10563 146 ALMFHAAEAMNVNVENCILVDDSSAGAQSGIAAGMEVFY 184 (221)
T ss_pred HHHHHHHHHcCCCHHHeEEEeCcHhhHHHHHHCCCEEEE
Confidence 333445555555567899999999999999999988763
No 157
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=93.90 E-value=0.1 Score=55.30 Aligned_cols=66 Identities=18% Similarity=0.239 Sum_probs=48.3
Q ss_pred ecChhhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhC--------CeeEEecCCcHHHHhccCeeecCCCchHHHH
Q 001949 668 RVEPSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKA--------DIGIAMGSGTAVAKSASDMVLADDNFATIVA 735 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A--------~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~ 735 (992)
+..+.+|...++.+.+. ...++++||+.||.+|++.+ ..||+|+.+ ..+..|++++.+ ...+..
T Consensus 162 ~p~~~~Kg~a~~~~~~~~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~~g--~~~~~A~~~~~~--~~~v~~ 237 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWHQPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIGSG--SKKTVAKFHLTG--PQQVLE 237 (244)
T ss_pred eeCCCCHHHHHHHHHHhcccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEecC--CcCCCceEeCCC--HHHHHH
Confidence 44566898888877654 45799999999999999998 588888533 245668998864 444555
Q ss_pred HH
Q 001949 736 AV 737 (992)
Q Consensus 736 ~i 737 (992)
.+
T Consensus 238 ~L 239 (244)
T TIGR00685 238 FL 239 (244)
T ss_pred HH
Confidence 54
No 158
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=93.48 E-value=0.17 Score=51.21 Aligned_cols=93 Identities=13% Similarity=0.081 Sum_probs=64.8
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhh
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (992)
.|+ .+.++.|++. ++..++||.....+....+..|+.... ..+++.++... .+-.|+-
T Consensus 90 ~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~f----d~i~~~~~~~~----------------~KP~p~~ 147 (188)
T PRK10725 90 LPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYF----DAVVAADDVQH----------------HKPAPDT 147 (188)
T ss_pred ccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHc----eEEEehhhccC----------------CCCChHH
Confidence 344 5889999875 899999999999999999999986543 12222221110 1123333
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 674 K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
=....+.++.....+++|||+.+|+.+-++||+-.
T Consensus 148 ~~~~~~~~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 148 FLRCAQLMGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred HHHHHHHcCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 44555666555677999999999999999998854
No 159
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.42 E-value=0.28 Score=47.95 Aligned_cols=86 Identities=17% Similarity=0.148 Sum_probs=67.5
Q ss_pred cCCCcHHHHHHHHHHHhCCc--EEEEEcCC-------CHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHh
Q 001949 590 LDPPREEVKNAMLSCMTAGI--RVIVVTGD-------NKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVAL 660 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi--~v~~~TGd-------~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 660 (992)
++++.|+..+.+++|++.+. +++++|.. +...|..+++.+|+..-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpvl-------------------------- 110 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPVL-------------------------- 110 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcEE--------------------------
Confidence 57889999999999999877 59999987 48899999999997631
Q ss_pred cceeEEeecChhhHHHHHHHHhhc-----CCEEEEEcCC-cCCHHHHhhCC
Q 001949 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDG-VNDAPALKKAD 705 (992)
Q Consensus 661 ~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg-~ND~~~l~~A~ 705 (992)
.+....|.-..++.+.++.+ .+.++||||- ..|+-|=...+
T Consensus 111 ----~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 111 ----RHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ----EeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 12224676667888888765 6789999998 47887766555
No 160
>PLN02645 phosphoglycolate phosphatase
Probab=93.05 E-value=0.24 Score=54.58 Aligned_cols=48 Identities=17% Similarity=0.203 Sum_probs=39.0
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHhCCC
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAF 632 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~ 632 (992)
|.+.-.+.+-|++.++|++|+++|++++++|++...+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 444445677899999999999999999999999977777766 456764
No 161
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=93.03 E-value=0.32 Score=48.93 Aligned_cols=98 Identities=16% Similarity=0.190 Sum_probs=66.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.+++.+++++|+ .+++++|+.+...+....+.+|+..... .++..++...-. ..++-.|
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd----~i~~~~~~~~~~------------~~~KP~p 144 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFD----GIFCFDTANPDY------------LLPKPSP 144 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhC----eEEEeecccCcc------------CCCCCCH
Confidence 47789999999998 4789999999999999999999865321 121111110000 0011233
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeE
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGI 708 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgI 708 (992)
+-=..+++.+....+.+++|||...|+.+-+.||+..
T Consensus 145 ~~~~~~~~~~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 145 QAYEKALREAGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred HHHHHHHHHhCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 3334556666666788999999999999999998754
No 162
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=92.93 E-value=0.33 Score=50.48 Aligned_cols=100 Identities=19% Similarity=0.204 Sum_probs=80.5
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.++.|++.+.+++|++.|+.+.+.|+.....+..+.+..|+.... ...+++++...- +-.
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f----~~~v~~~dv~~~----------------KP~ 144 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYF----DVIVTADDVARG----------------KPA 144 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhc----chhccHHHHhcC----------------CCC
Confidence 578999999999999999999999999999999999999998754 223333333221 244
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
|+-=....+.|.-....|+++.|+.+.+.|-++|+.-+-.
T Consensus 145 Pd~yL~Aa~~Lgv~P~~CvviEDs~~Gi~Aa~aAGm~vv~ 184 (221)
T COG0637 145 PDIYLLAAERLGVDPEECVVVEDSPAGIQAAKAAGMRVVG 184 (221)
T ss_pred CHHHHHHHHHcCCChHHeEEEecchhHHHHHHHCCCEEEE
Confidence 6666777777777788999999999999999999987653
No 163
>PRK10444 UMP phosphatase; Provisional
Probab=92.67 E-value=0.54 Score=49.74 Aligned_cols=45 Identities=9% Similarity=0.217 Sum_probs=39.3
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHh
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI 629 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~ 629 (992)
|.+.-.+.+-|++.++|++|+++|++++++||+...+...+++++
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l 54 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRF 54 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHH
Confidence 555556788999999999999999999999999998888887775
No 164
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=92.40 E-value=0.77 Score=44.17 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=68.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH---HHHHh-----CCCCCccccccccccc-hh-hhcCCHHHHHHHh
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKI-----GAFDHLVDFVGRSYTA-SE-FEELPAMQQTVAL 660 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~---ia~~~-----gi~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~ 660 (992)
|..++++.+..+.++++|++++.+|+|..-.+.. ...+. ++.. |.++.. +. +..+..
T Consensus 26 d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~------Gpv~~sP~~l~~al~r------- 92 (157)
T PF08235_consen 26 DWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPD------GPVLLSPDSLFSALHR------- 92 (157)
T ss_pred hhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCC------CCEEECCcchhhhhhc-------
Confidence 7999999999999999999999999999655433 33333 3332 112111 10 111111
Q ss_pred cceeEEeecChhhHHHHHHHHhhc-----CCEEEEEcCCcCCHHHHhhCCee
Q 001949 661 QHMALFTRVEPSHKRMLVEALQNQ-----NEVVAMTGDGVNDAPALKKADIG 707 (992)
Q Consensus 661 ~~~~v~~r~~p~~K~~iv~~l~~~-----~~~v~~iGDg~ND~~~l~~A~vg 707 (992)
.+..+-..+.|...++.++.. ....++.|+..+|+.+.++++|-
T Consensus 93 ---Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip 141 (157)
T PF08235_consen 93 ---EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIP 141 (157)
T ss_pred ---cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCC
Confidence 134444556899999888764 45678899999999999988774
No 165
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=92.30 E-value=0.15 Score=50.77 Aligned_cols=116 Identities=20% Similarity=0.262 Sum_probs=69.1
Q ss_pred CCcHHHHHHHHHHHhCCc-EEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAMLSCMTAGI-RVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi-~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
|+-|+..++|+.+++.|. .++++|--|.-....+-+..|+..-... +.+....-+-...-...-.....-+.++-
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d~F~~----IfTNPa~~da~G~L~v~pyH~~hsC~~CP 159 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHDLFSE----IFTNPACVDASGRLLVRPYHTQHSCNLCP 159 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHHHHHH----HhcCCcccCCCCcEEeecCCCCCccCcCc
Confidence 677999999999999997 9999999999888888888887542211 11100000000000000000001223332
Q ss_pred hh-hHHHHHHHHhhc-------CCEEEEEcCCcCC-HHHHhhCCeeEEec
Q 001949 671 PS-HKRMLVEALQNQ-------NEVVAMTGDGVND-APALKKADIGIAMG 711 (992)
Q Consensus 671 p~-~K~~iv~~l~~~-------~~~v~~iGDg~ND-~~~l~~A~vgIa~g 711 (992)
+. =|..++..++.. -+.+..+|||.|| ||+++...--+||-
T Consensus 160 sNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~amp 209 (256)
T KOG3120|consen 160 SNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMP 209 (256)
T ss_pred hhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecc
Confidence 22 366666666543 1379999999999 67877766666774
No 166
>PHA02597 30.2 hypothetical protein; Provisional
Probab=92.20 E-value=0.25 Score=50.42 Aligned_cols=96 Identities=9% Similarity=0.031 Sum_probs=56.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.+++++|++++ +.+++|..+.......-+.+|+........+.++.+++. ...|
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~f~~i~~~~~~-------------------~~kp 133 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGAFSEVLMCGHD-------------------ESKE 133 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCcccEEEEeccC-------------------cccH
Confidence 46889999999999986 566667755554444556666643211110111111110 0112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhC--CeeEE
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA--DIGIA 709 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A--~vgIa 709 (992)
+--..+++.++ .+.+++|||..+|+.+-++| |+-..
T Consensus 134 ~~~~~a~~~~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 134 KLFIKAKEKYG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred HHHHHHHHHhC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 22222333333 35688999999999999999 98654
No 167
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=92.15 E-value=0.88 Score=48.29 Aligned_cols=50 Identities=10% Similarity=0.018 Sum_probs=40.4
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcC---CCHHHHHHHHHHhCCCCC
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTG---DNKSTAESICHKIGAFDH 634 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TG---d~~~~a~~ia~~~gi~~~ 634 (992)
|.+.-.+.+-+++.++|++|+++|++++++|| +.........+++|+...
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 33334566677999999999999999999996 778888888888998643
No 168
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=91.71 E-value=0.89 Score=52.98 Aligned_cols=100 Identities=17% Similarity=0.057 Sum_probs=64.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH-hCCCCCccc---c-ccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK-IGAFDHLVD---F-VGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~-~gi~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
+++++.+ .++++|.+ +++|+-...-++.+|++ +|++.-... . .+..++|.-... -
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~VIgTeLev~~~G~~TG~i~g~----------------~ 170 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADKVLGTELEVSKSGRATGFMKKP----------------G 170 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCEEEecccEECcCCEEeeeecCC----------------C
Confidence 5666555 44567755 99999999999999987 898742110 0 011122220000 0
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecC
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~ 712 (992)
.+.-++|.+-++..........+.||+.||.|||+.|+-+.+++.
T Consensus 171 ~c~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V~~ 215 (497)
T PLN02177 171 VLVGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMVPR 215 (497)
T ss_pred CCccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEeCC
Confidence 034567888777433222223789999999999999999999985
No 169
>PLN02580 trehalose-phosphatase
Probab=91.63 E-value=0.32 Score=54.17 Aligned_cols=62 Identities=23% Similarity=0.184 Sum_probs=45.6
Q ss_pred hhHHHHHHHHhhc-C---C---EEEEEcCCcCCHHHHhh-----CCeeEEecCCcHHHHhccCeeecCCCchHHHHHH
Q 001949 672 SHKRMLVEALQNQ-N---E---VVAMTGDGVNDAPALKK-----ADIGIAMGSGTAVAKSASDMVLADDNFATIVAAV 737 (992)
Q Consensus 672 ~~K~~iv~~l~~~-~---~---~v~~iGDg~ND~~~l~~-----A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i 737 (992)
.+|...++.+.+. + . .++++||+.||..||+. +++||+||++.... .|++.+.+ -..+..++
T Consensus 300 ~~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t--~A~y~L~d--p~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKES--NAFYSLRD--PSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCc--cceEEcCC--HHHHHHHH
Confidence 4899998888764 2 1 25899999999999996 69999999765433 56787754 44555555
No 170
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=91.31 E-value=0.84 Score=45.04 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=43.3
Q ss_pred cEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH---hCCC
Q 001949 581 LTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK---IGAF 632 (992)
Q Consensus 581 l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~---~gi~ 632 (992)
+.+-|.+.++|..-|++.++++.|+.++.+|..+|.-+.+.-..+.++ +|+.
T Consensus 12 lDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 12 LDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred EeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 346799999999999999999999999999999998877766666544 5554
No 171
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=90.60 E-value=1 Score=41.80 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=47.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHH---------------HHHHHhCCCCC------------ccccccccc
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAE---------------SICHKIGAFDH------------LVDFVGRSY 643 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~---------------~ia~~~gi~~~------------~~~~~~~~~ 643 (992)
+++.+++.+++++++++|++++++|||...... ....+-|+... ....++..+
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ipYd~l~~~kp~~~~~~~~~dD~~i 102 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHNVPYDEIYVGKPWCGHDGFYVDDRAI 102 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcCCCCceEEeCCCcCCCCCceecchhh
Confidence 678899999999999999999999999876543 33334454421 111234555
Q ss_pred cchhhhcCCHHHHHHHhc
Q 001949 644 TASEFEELPAMQQTVALQ 661 (992)
Q Consensus 644 ~~~~~~~~~~~~~~~~~~ 661 (992)
..+++.+++.++..+++.
T Consensus 103 r~~~~~~~~~~~~~~~~~ 120 (126)
T TIGR01689 103 RPSEFSSLTYDEINTLTK 120 (126)
T ss_pred CHHHHHhcCHHHHHHHHh
Confidence 566666666666655543
No 172
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=89.18 E-value=0.32 Score=50.68 Aligned_cols=89 Identities=16% Similarity=0.174 Sum_probs=56.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHH---HHHHHHHHhCCCCCccccccccccchhh-hcCCHHHHHHHhcceeEE
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKS---TAESICHKIGAFDHLVDFVGRSYTASEF-EELPAMQQTVALQHMALF 666 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~---~a~~ia~~~gi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~ 666 (992)
++.-|++.+.++.++++|++|+.+|||+.. .+..=-++.|..... ...+.+..- ..
T Consensus 114 ~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~~~~~----~l~lr~~~~~~~---------------- 173 (229)
T PF03767_consen 114 APAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGFPGWD----HLILRPDKDPSK---------------- 173 (229)
T ss_dssp GEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTTSTBS----CGEEEEESSTSS----------------
T ss_pred CcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCCCccc----hhcccccccccc----------------
Confidence 466788999999999999999999999865 233344566754311 111111100 00
Q ss_pred eecChhhHHHHHHHHhhcC-CEEEEEcCCcCCHHH
Q 001949 667 TRVEPSHKRMLVEALQNQN-EVVAMTGDGVNDAPA 700 (992)
Q Consensus 667 ~r~~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~~ 700 (992)
....+-|...-+.+++.| ++++.+||..+|..-
T Consensus 174 -~~~~~yK~~~r~~i~~~Gy~Ii~~iGD~~~D~~~ 207 (229)
T PF03767_consen 174 -KSAVEYKSERRKEIEKKGYRIIANIGDQLSDFSG 207 (229)
T ss_dssp -------SHHHHHHHHHTTEEEEEEEESSGGGCHC
T ss_pred -ccccccchHHHHHHHHcCCcEEEEeCCCHHHhhc
Confidence 001234778888888885 467889999999864
No 173
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=88.57 E-value=0.81 Score=48.22 Aligned_cols=93 Identities=11% Similarity=0.092 Sum_probs=57.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++-|++.+++++|++. +++.++|..+.. .+..|+..... .++..++... .+-.|
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd----~i~~~~~~~~----------------~KP~p 166 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFE----FVLRAGPHGR----------------SKPFS 166 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhc----eeEecccCCc----------------CCCcH
Confidence 5678999999999975 889999886654 14566643321 1111111100 01112
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCC-cCCHHHHhhCCeeEEe
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIAM 710 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa~ 710 (992)
+-=..+++.+.-..+.++||||+ ..|+.+-+.||+-...
T Consensus 167 ~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 167 DMYHLAAEKLNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred HHHHHHHHHcCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 22233344444456789999999 5999999999987654
No 174
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=87.89 E-value=1.3 Score=47.34 Aligned_cols=40 Identities=18% Similarity=0.142 Sum_probs=32.9
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHH---HHHHHHhCCC
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTA---ESICHKIGAF 632 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a---~~ia~~~gi~ 632 (992)
+-|++.++|++|+++|++++++||++..+. ....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 888999999999999999999999887764 4444556664
No 175
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=87.67 E-value=1.4 Score=42.26 Aligned_cols=90 Identities=21% Similarity=0.304 Sum_probs=59.9
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHH----HHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKS----TAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~----~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
+++-+++.|+.-++.|=+++.+|||.+- ++..+|+...|.+.+ .++|+.
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m~---------------------------pv~f~G 167 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNMN---------------------------PVIFAG 167 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCCc---------------------------ceeecc
Confidence 5566778899999999999999999865 455667777664432 113443
Q ss_pred cChh-hHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCe-eEEe
Q 001949 669 VEPS-HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADI-GIAM 710 (992)
Q Consensus 669 ~~p~-~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~v-gIa~ 710 (992)
..|. .+..-...+|+++ .-..-||+.||+.|-|+|++ ||-+
T Consensus 168 dk~k~~qy~Kt~~i~~~~-~~IhYGDSD~Di~AAkeaG~RgIRi 210 (237)
T COG3700 168 DKPKPGQYTKTQWIQDKN-IRIHYGDSDNDITAAKEAGARGIRI 210 (237)
T ss_pred CCCCcccccccHHHHhcC-ceEEecCCchhhhHHHhcCccceeE
Confidence 3331 1222234455554 55778999999999999986 5543
No 176
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.64 E-value=1.5 Score=45.81 Aligned_cols=94 Identities=16% Similarity=0.217 Sum_probs=63.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
-++.+++.++++++++. .+++++|.-....+....+++|+..... .++..++. ....
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd----~v~~s~~~------------------g~~K 154 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFD----AVFISEDV------------------GVAK 154 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhh----eEEEeccc------------------ccCC
Confidence 36678899999999998 9999999988888999999999765431 11111111 1123
Q ss_pred hhhH--HHHHHHHhhcCCEEEEEcCC-cCCHHHHhhCCee
Q 001949 671 PSHK--RMLVEALQNQNEVVAMTGDG-VNDAPALKKADIG 707 (992)
Q Consensus 671 p~~K--~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~A~vg 707 (992)
|+.+ ..+.+.+....+.+++|||+ .||+..-+++|+-
T Consensus 155 P~~~~f~~~~~~~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 155 PDPEIFEYALEKLGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred CCcHHHHHHHHHcCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 3322 34455555557789999997 5784555666664
No 177
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=87.42 E-value=3.5 Score=43.49 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=52.7
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHH----HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeE
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMAL 665 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 665 (992)
+.|.-|++.+..+.+++.|++|+++|||.... ...+ ++.|..... . +
T Consensus 143 ~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~~~~----~------------------------L 193 (275)
T TIGR01680 143 EAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYHTWE----K------------------------L 193 (275)
T ss_pred cCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCCCcc----e------------------------e
Confidence 46778899999999999999999999998643 2222 345664321 1 2
Q ss_pred EeecC--------hhhHHHHHHHHhhcCC-EEEEEcCCcCCH
Q 001949 666 FTRVE--------PSHKRMLVEALQNQNE-VVAMTGDGVNDA 698 (992)
Q Consensus 666 ~~r~~--------p~~K~~iv~~l~~~~~-~v~~iGDg~ND~ 698 (992)
+-|.. .+-|...-+.+.+.|+ +++.+||..+|.
T Consensus 194 iLR~~~D~~~~~av~yKs~~R~~li~eGYrIv~~iGDq~sDl 235 (275)
T TIGR01680 194 ILKDPQDNSAENAVEYKTAARAKLIQEGYNIVGIIGDQWNDL 235 (275)
T ss_pred eecCCCCCccchhHHHHHHHHHHHHHcCceEEEEECCCHHhc
Confidence 22211 1235444455555654 678899999997
No 178
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=85.11 E-value=2.7 Score=41.63 Aligned_cols=99 Identities=24% Similarity=0.312 Sum_probs=59.7
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhc-----ceeEEe
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQ-----HMALFT 667 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~v~~ 667 (992)
+.+++.+++..++++|.+++|+|.-+ ||-.. ..+...++..++........ +...+|
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg-------yf~~~~f~~~~~~m~~~l~~~gv~id~i~~C 93 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG-------YFTEADFDKLHNKMLKILASQGVKIDGILYC 93 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc-------CccHHHHHHHHHHHHHHHHHcCCccceEEEC
Confidence 57899999999999999999999643 22221 11222222221111111110 122444
Q ss_pred ecChhh--------HHHHHHHHhhc---CCEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 668 RVEPSH--------KRMLVEALQNQ---NEVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 668 r~~p~~--------K~~iv~~l~~~---~~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
.-.|++ ...+.+.+++. -....+|||...|..+-..|+++ ..
T Consensus 94 ph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n~gi~-~~ 146 (181)
T COG0241 94 PHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAENAGIK-GV 146 (181)
T ss_pred CCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHHCCCC-ce
Confidence 444442 34455555554 37889999999999999998887 54
No 179
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=85.06 E-value=4 Score=42.44 Aligned_cols=134 Identities=16% Similarity=0.199 Sum_probs=73.1
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchh---hhcCCHHHHHHHhcceeEEe
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASE---FEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~ 667 (992)
-.+|+++.+.++.|++.+|.+.++|+.-......+-++-|...++..+.+.-+.-++ +....+. + |
T Consensus 89 i~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvSN~M~Fd~~g~l~gF~~~-l--------I-- 157 (246)
T PF05822_consen 89 IMLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVSNFMDFDEDGVLVGFKGP-L--------I-- 157 (246)
T ss_dssp --B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEEE-EEE-TTSBEEEE-SS-------------
T ss_pred hhhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEeeeEEECCcceEeecCCC-c--------e--
Confidence 468999999999999999999999999888888888888877665432221111110 0000000 0 0
Q ss_pred ecChhhHHH-HH---HHHhh--cCCEEEEEcCCcCCHHHHhhC---CeeEEec--CCc-----HHHHhccCeeecCCCch
Q 001949 668 RVEPSHKRM-LV---EALQN--QNEVVAMTGDGVNDAPALKKA---DIGIAMG--SGT-----AVAKSASDMVLADDNFA 731 (992)
Q Consensus 668 r~~p~~K~~-iv---~~l~~--~~~~v~~iGDg~ND~~~l~~A---~vgIa~g--~~~-----~~~~~~ad~vl~~~~~~ 731 (992)
.+-.|.+ .+ ...++ ....|+..||+.-|+.|-.-. +.-+.+| |.. +.-+++-|+|+.+|.--
T Consensus 158 --H~~NKn~~~l~~~~~~~~~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVlv~D~tm 235 (246)
T PF05822_consen 158 --HTFNKNESALEDSPYFKQLKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVLVDDQTM 235 (246)
T ss_dssp ---TT-HHHHHHTTHHHHHCTTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEEET--B-
T ss_pred --EEeeCCcccccCchHHHHhccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEEECCCCc
Confidence 0111221 11 11222 246899999999999997544 4445555 443 23456789999988766
Q ss_pred HHHHHH
Q 001949 732 TIVAAV 737 (992)
Q Consensus 732 ~i~~~i 737 (992)
.++..|
T Consensus 236 ~v~~~i 241 (246)
T PF05822_consen 236 DVPNAI 241 (246)
T ss_dssp HHHHHH
T ss_pred hHHHHH
Confidence 666554
No 180
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=84.08 E-value=1.2 Score=44.38 Aligned_cols=86 Identities=14% Similarity=0.228 Sum_probs=57.5
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecCh
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEP 671 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p 671 (992)
++.|++.++++ ++.++|+-+........+.+|+.... ..++++++... .+-.|
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~f----d~v~~~~~~~~----------------~KP~p 142 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYF----DRAFSVDTVRA----------------YKPDP 142 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHH----hhhccHhhcCC----------------CCCCH
Confidence 47788888887 37899999999888888999986543 11222222111 11223
Q ss_pred hhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhC
Q 001949 672 SHKRMLVEALQNQNEVVAMTGDGVNDAPALKKA 704 (992)
Q Consensus 672 ~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A 704 (992)
+-=..+.+.+.-..+.+++|||+..|+.+-+++
T Consensus 143 ~~f~~~~~~~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 143 VVYELVFDTVGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred HHHHHHHHHHCCCHHHeEeEecChhhHHHHhcC
Confidence 333555666666678899999999999876653
No 181
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=83.89 E-value=2 Score=45.73 Aligned_cols=43 Identities=7% Similarity=0.078 Sum_probs=39.6
Q ss_pred Cc-HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCc
Q 001949 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHL 635 (992)
Q Consensus 593 ~~-~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~ 635 (992)
+| |++.+++++|+++|+++.++|+.....+...-+++|+....
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YF 189 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYF 189 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCccc
Confidence 56 99999999999999999999999999999999999998643
No 182
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=82.97 E-value=2.4 Score=45.89 Aligned_cols=47 Identities=11% Similarity=0.083 Sum_probs=35.1
Q ss_pred ecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH---HHHHhCCCC
Q 001949 587 VGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAES---ICHKIGAFD 633 (992)
Q Consensus 587 i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~---ia~~~gi~~ 633 (992)
+.-.+.+-+++.++|++|+++|++++++||+...+... -.+++|+..
T Consensus 13 l~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~ 62 (279)
T TIGR01452 13 LWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNG 62 (279)
T ss_pred eEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCC
Confidence 33356778889999999999999999999977554433 335567643
No 183
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=82.52 E-value=3.7 Score=43.63 Aligned_cols=112 Identities=16% Similarity=0.145 Sum_probs=71.6
Q ss_pred EEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCC-CCCccccccccccchhhhcCCHHHHHHHhcc
Q 001949 584 IGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGA-FDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (992)
Q Consensus 584 lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (992)
=|.+.--+.+-|++.++|++|+++|++++.+|.....+...+++++.- -...... +.
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~-~~--------------------- 73 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTP-DD--------------------- 73 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCH-HH---------------------
Confidence 377778889999999999999999999999999998888866655432 1110000 00
Q ss_pred eeEEeecChhhHHHHHHHHhhc--CCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCC
Q 001949 663 MALFTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDN 729 (992)
Q Consensus 663 ~~v~~r~~p~~K~~iv~~l~~~--~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~ 729 (992)
++. +. ......++++ +..|.++|. ..+...++.+++-+.-.... ...|+|+...+
T Consensus 74 --i~T---S~--~at~~~l~~~~~~~kv~viG~-~~l~~~l~~~G~~~~~~~~~----~~~d~Vv~g~d 130 (269)
T COG0647 74 --IVT---SG--DATADYLAKQKPGKKVYVIGE-EGLKEELEGAGFELVDEEEP----ARVDAVVVGLD 130 (269)
T ss_pred --eec---HH--HHHHHHHHhhCCCCEEEEECC-cchHHHHHhCCcEEeccCCC----CcccEEEEecC
Confidence 111 11 1223334443 369999995 46778889888877653221 11577775444
No 184
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=81.76 E-value=5.9 Score=41.55 Aligned_cols=62 Identities=26% Similarity=0.307 Sum_probs=31.2
Q ss_pred EeecChhhHHHHHHHHhhc-C------CEEEEEcCCcCCHHHHhhC------CeeEEecCCc-HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQNQ-N------EVVAMTGDGVNDAPALKKA------DIGIAMGSGT-AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~~-~------~~v~~iGDg~ND~~~l~~A------~vgIa~g~~~-~~~~~~ad~vl~~ 727 (992)
=.|..-..|...++.+-+. + ..++++||...|-.|++.. +++|.++..+ .....+|++-+.+
T Consensus 158 Evrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 158 EVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEE-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred EEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3344445699999887665 3 3699999999999999763 6677787543 3333456665544
No 185
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=81.57 E-value=7.7 Score=41.13 Aligned_cols=132 Identities=15% Similarity=0.162 Sum_probs=78.3
Q ss_pred cccCCCcHHHHHHHHHHHhC-CcEEEEEcCCCHHHHHHHHHHhCC--CCCccccccccccchhhhc--------------
Q 001949 588 GMLDPPREEVKNAMLSCMTA-GIRVIVVTGDNKSTAESICHKIGA--FDHLVDFVGRSYTASEFEE-------------- 650 (992)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~-gi~v~~~TGd~~~~a~~ia~~~gi--~~~~~~~~~~~~~~~~~~~-------------- 650 (992)
-....+-++..+.+++|... ..-++++||++.........-.|+ ...+.... ....|.....
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~-r~~~g~~~~~~~~~~~~~~~~~v~ 114 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEV-RDPNGKWWINLAEEADLRWLKEVA 114 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEE-ecCCCCeeEecCHHHHhhHHHHHH
Confidence 34456889999999999877 557999999999988887763333 11111100 0001110000
Q ss_pred ----------------------------CCHHHHH-----H-H-----------hcceeEEeecChhhHHHHHHHHhhc-
Q 001949 651 ----------------------------LPAMQQT-----V-A-----------LQHMALFTRVEPSHKRMLVEALQNQ- 684 (992)
Q Consensus 651 ----------------------------~~~~~~~-----~-~-----------~~~~~v~~r~~p~~K~~iv~~l~~~- 684 (992)
..+++.. . . ..+..|-+|.+-..|..+++.+.+.
T Consensus 115 ~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~ 194 (266)
T COG1877 115 AILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL 194 (266)
T ss_pred HHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC
Confidence 0000000 0 0 0123456666667799999965543
Q ss_pred ---CCEEEEEcCCcCCHHHHhhCC----eeEEecCCcHHHHhc
Q 001949 685 ---NEVVAMTGDGVNDAPALKKAD----IGIAMGSGTAVAKSA 720 (992)
Q Consensus 685 ---~~~v~~iGDg~ND~~~l~~A~----vgIa~g~~~~~~~~~ 720 (992)
+..+++.||...|-.|++..+ ++|-+|.++..++..
T Consensus 195 ~~~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~~~~t~a~~~ 237 (266)
T COG1877 195 PFDGRFPIFAGDDLTDEDAFAAVNKLDSITVKVGVGSTQAKFR 237 (266)
T ss_pred CCCCCcceecCCCCccHHHHHhhccCCCceEEecCCccccccc
Confidence 335899999999999999887 455556554444433
No 186
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=80.09 E-value=3.4 Score=44.06 Aligned_cols=42 Identities=10% Similarity=-0.022 Sum_probs=38.2
Q ss_pred Cc-HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC
Q 001949 593 PR-EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (992)
Q Consensus 593 ~~-~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (992)
+| |++.+++++|+++|+++.++|+.+...+....+.+|+...
T Consensus 148 irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y 190 (303)
T PHA03398 148 IRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY 190 (303)
T ss_pred cCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc
Confidence 45 9999999999999999999998888888999999999754
No 187
>PLN02151 trehalose-phosphatase
Probab=79.57 E-value=14 Score=40.95 Aligned_cols=48 Identities=17% Similarity=0.185 Sum_probs=36.6
Q ss_pred CCcEEEEEecccCC--CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHH
Q 001949 579 KDLTFIGLVGMLDP--PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICH 627 (992)
Q Consensus 579 ~~l~~lG~i~~~d~--~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~ 627 (992)
.|.+++-++---|. +.+++.++|++|. ++..+.++|||.......+..
T Consensus 105 yDGTL~PIv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~ 154 (354)
T PLN02151 105 YDGTLSPIVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVK 154 (354)
T ss_pred cCccCCCCCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcC
Confidence 46666654433333 7799999999999 567999999999998877664
No 188
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=78.32 E-value=1.9 Score=42.36 Aligned_cols=95 Identities=12% Similarity=0.072 Sum_probs=63.3
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 588 GMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.+.=..||++.+.+++|.+. .++++.|......|..+.+.++....... . +++
T Consensus 38 ~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~~~f~---~-----------------------~l~ 90 (162)
T TIGR02251 38 PVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGGKVIS---R-----------------------RLY 90 (162)
T ss_pred EEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCCCEEe---E-----------------------EEE
Confidence 34456899999999999987 99999999999999999999986541110 0 111
Q ss_pred ecC-hhhHHHHHHHH---hhcCCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 668 RVE-PSHKRMLVEAL---QNQNEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 668 r~~-p~~K~~iv~~l---~~~~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
|-+ ...|...++.+ ......|+++||...|..+-++++|-|.
T Consensus 91 r~~~~~~~~~~~K~L~~l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 91 RESCVFTNGKYVKDLSLVGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred ccccEEeCCCEEeEchhcCCChhhEEEEeCChhhhccCccCEeecC
Confidence 100 00011123333 3345689999999988877666655443
No 189
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=78.00 E-value=5.5 Score=46.77 Aligned_cols=40 Identities=18% Similarity=0.283 Sum_probs=33.0
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCH------------HHHHHHHHHhCCC
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNK------------STAESICHKIGAF 632 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~------------~~a~~ia~~~gi~ 632 (992)
+-|++.++|++|+++|++++++|.-.. ..+..+.+++|+.
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgip 249 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGVP 249 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCCc
Confidence 469999999999999999999998655 3466677777764
No 190
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=74.04 E-value=9.3 Score=42.19 Aligned_cols=106 Identities=13% Similarity=0.104 Sum_probs=66.1
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHh-C-------CCCCccccccccccch----------hhhcCCHH-
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKI-G-------AFDHLVDFVGRSYTAS----------EFEELPAM- 654 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~-g-------i~~~~~~~~~~~~~~~----------~~~~~~~~- 654 (992)
-|++.+.+++|+++|+++.++|+-....+..+.+.+ | +.... +.++.+. .+.....+
T Consensus 186 ~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g~~~~~~~w~~yF----D~IIt~a~KP~FF~~~~pf~~v~~~~ 261 (343)
T TIGR02244 186 DPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLGPFLGEHDWRDYF----DVVIVDARKPGFFTEGRPFRQVDVET 261 (343)
T ss_pred chhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhCCcccccchHhhC----cEEEeCCCCCcccCCCCceEEEeCCC
Confidence 679999999999999999999999999999999996 6 33222 1122111 11110000
Q ss_pred --H-HHH--HhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCC-cCCHHHHh-hCCe
Q 001949 655 --Q-QTV--ALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDG-VNDAPALK-KADI 706 (992)
Q Consensus 655 --~-~~~--~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~~l~-~A~v 706 (992)
. ... .+..-.|++.-+- ..+.+.+...+..|++|||. ..|+-.-+ .++.
T Consensus 262 g~~~~~~~~~l~~g~vY~gGn~---~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw 317 (343)
T TIGR02244 262 GSLKWGEVDGLEPGKVYSGGSL---KQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGW 317 (343)
T ss_pred CcccCCccccccCCCeEeCCCH---HHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCc
Confidence 0 000 0122234443332 34556667778999999998 46887665 5654
No 191
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=72.05 E-value=22 Score=38.43 Aligned_cols=139 Identities=15% Similarity=0.163 Sum_probs=76.1
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEE---EEEcCCCHHHHHH------HHHHhCCCCCcccc---------------------
Q 001949 589 MLDPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTAES------ICHKIGAFDHLVDF--------------------- 638 (992)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v---~~~TGd~~~~a~~------ia~~~gi~~~~~~~--------------------- 638 (992)
+.++++++.++.++.+++.|++. ++.-||++....+ .|+++||......+
T Consensus 12 iA~~i~~~lk~~i~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~t~~~l~~~I~~lN~D~~ 91 (301)
T PRK14194 12 AAARVLAQVREDVRTLKAAGIEPALAVILVGNDPASQVYVRNKILRAEEAGIRSLEHRLPADTSQARLLALIAELNADPS 91 (301)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHcCCCC
Confidence 34567778888888888777653 5566777665433 56667776433221
Q ss_pred -ccccccc------------------hhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCC-cC
Q 001949 639 -VGRSYTA------------------SEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDG-VN 696 (992)
Q Consensus 639 -~~~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg-~N 696 (992)
+|..+.- .+.+.++......+...-.-|.-|||.-=.++++..+- .|+.|+++|-| .-
T Consensus 92 V~GIlvqlPLP~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~iv 171 (301)
T PRK14194 92 VNGILLQLPLPAHIDEARVLQAINPLKDVDGFHSENVGGLSQGRDVLTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIV 171 (301)
T ss_pred CCeEEEeCCCCCCCCHHHHHhccCchhccCccChhhhhHHhcCCCCCCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCcc
Confidence 1111100 01111111111111111123455777666666666543 39999999997 44
Q ss_pred CHH---HHhhCCeeEEec-CC---cHHHHhccCeeecC
Q 001949 697 DAP---ALKKADIGIAMG-SG---TAVAKSASDMVLAD 727 (992)
Q Consensus 697 D~~---~l~~A~vgIa~g-~~---~~~~~~~ad~vl~~ 727 (992)
=.| +|..+|..+.+- +. ...+...||+++.-
T Consensus 172 G~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIsa 209 (301)
T PRK14194 172 GKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVAA 209 (301)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 433 566777777653 22 23345678999864
No 192
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=71.31 E-value=5.6 Score=33.09 Aligned_cols=57 Identities=25% Similarity=0.295 Sum_probs=38.9
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCC-cCCHHHHhhCCeeEE-e--cC-CcHHH---HhccCeeecC
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-M--GS-GTAVA---KSASDMVLAD 727 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa-~--g~-~~~~~---~~~ad~vl~~ 727 (992)
|.--..+.+.+......++||||. ..|+.+-+++++--. + |. ..+.. ...+|+|+.+
T Consensus 7 p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 7 PGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp HHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred HHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEECC
Confidence 444445566666567789999999 999999999998554 3 32 22222 2578888754
No 193
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=67.37 E-value=23 Score=37.20 Aligned_cols=48 Identities=15% Similarity=0.169 Sum_probs=35.1
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEc---CCCHHHHHHHHHH-hCCC
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVT---GDNKSTAESICHK-IGAF 632 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~T---Gd~~~~a~~ia~~-~gi~ 632 (992)
|++.-.+.+-+++.++|+.++++|++++++| |++.........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 4444456777899999999999999999998 5665554444444 6654
No 194
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=66.37 E-value=5.7 Score=42.31 Aligned_cols=123 Identities=10% Similarity=0.085 Sum_probs=68.6
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhh
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (992)
-++..++++.|++.|.+..+.|+.............|+.. -+..+.. ..-.+..++.+-.|+-
T Consensus 122 y~~l~~a~~~L~~~~~~~~iatn~~~~~~~~~~~~~g~g~-------------~~~~i~~----~~~~~~~~~gKP~p~~ 184 (257)
T TIGR01458 122 YQILNQAFRLLLDGAKPLLIAIGKGRYYKRKDGLALDVGP-------------FVTALEY----ATDTKATVVGKPSKTF 184 (257)
T ss_pred HHHHHHHHHHHHcCCCCEEEEeCCCCCCcCCCCCCCCchH-------------HHHHHHH----HhCCCceeecCCCHHH
Confidence 4788899999999999999999876543322211111110 0000000 0000111233444544
Q ss_pred HHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCeeEE-ecCC--c-H---HHHhccCeeecCCCchHHHH
Q 001949 674 KRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIA-MGSG--T-A---VAKSASDMVLADDNFATIVA 735 (992)
Q Consensus 674 K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgIa-~g~~--~-~---~~~~~ad~vl~~~~~~~i~~ 735 (992)
=..+++.+....+.++||||.. +|+.+-+.+++--. +..| . . .....+|+++.+ +..+..
T Consensus 185 ~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~i~v~~G~~~~~~~~~~~~~pd~~~~s--l~el~~ 252 (257)
T TIGR01458 185 FLEALRATGCEPEEAVMIGDDCRDDVGGAQDCGMRGIQVRTGKYRPSDEEKINVPPDLTCDS--LPHAVD 252 (257)
T ss_pred HHHHHHHhCCChhhEEEECCCcHHHHHHHHHcCCeEEEECCCCCChHHhcccCCCCCEEECC--HHHHHH
Confidence 4455566655678999999996 99999999988554 4333 1 1 112346777643 444443
No 195
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=64.55 E-value=34 Score=36.99 Aligned_cols=62 Identities=15% Similarity=0.201 Sum_probs=38.7
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCC-cCCH---HHHhhCCeeEEec-CC---cHHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDG-VNDA---PALKKADIGIAMG-SG---TAVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg-~ND~---~~l~~A~vgIa~g-~~---~~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++...- .|+.|+++|-+ .-=. .+|..++..+.+- +- .+.+...||+++.-
T Consensus 137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIsa 208 (296)
T PRK14188 137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVAA 208 (296)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEEe
Confidence 455777665566665532 48999999954 3333 3566777777654 22 23445678998854
No 196
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.42 E-value=20 Score=37.27 Aligned_cols=106 Identities=11% Similarity=0.036 Sum_probs=63.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChh
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPS 672 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~ 672 (992)
+-++..+++++||++|..+.++|.=.... ..+-..+|+...... .+.+++.-..- -.|.
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~fD~---vv~S~e~g~~K-----------------PDp~ 172 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAYFDF---VVESCEVGLEK-----------------PDPR 172 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHhhhh---hhhhhhhccCC-----------------CChH
Confidence 44556699999999998888888655433 356666666532210 11111111111 1122
Q ss_pred hHHHHHHHHhhcCCEEEEEcCC-cCCHHHHhhCCeeEE-ecCCcHHHHh
Q 001949 673 HKRMLVEALQNQNEVVAMTGDG-VNDAPALKKADIGIA-MGSGTAVAKS 719 (992)
Q Consensus 673 ~K~~iv~~l~~~~~~v~~iGDg-~ND~~~l~~A~vgIa-~g~~~~~~~~ 719 (992)
==...++.++.+.+.++++||. .||...-+.+|.-=- +.+.....++
T Consensus 173 If~~al~~l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 173 IFQLALERLGVKPEECVHIGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred HHHHHHHHhCCChHHeEEecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 2245667777778999999996 799999888876433 4444444433
No 197
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=61.84 E-value=22 Score=34.96 Aligned_cols=97 Identities=14% Similarity=0.195 Sum_probs=53.4
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEc-CCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecC
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVT-GDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~T-Gd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+-|+++++++.|++.|+++.++| -+.+.-|+.+-+.+++...... .. ...+.--+...-
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~----~~---------------~~~~~F~~~eI~ 105 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGD----GV---------------PLIEYFDYLEIY 105 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------------CCECEEEES
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccc----cc---------------cchhhcchhhee
Confidence 467999999999999999999999 5789999999999999821100 00 000111123344
Q ss_pred hhhHHHHHHHHhhc----CCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 671 PSHKRMLVEALQNQ----NEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 671 p~~K~~iv~~l~~~----~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
|..|..-.+.++++ -+.++++=|-.......+. +||.
T Consensus 106 ~gsK~~Hf~~i~~~tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 106 PGSKTTHFRRIHRKTGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp SS-HHHHHHHHHHHH---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred cCchHHHHHHHHHhcCCChhHEEEecCchhcceeeEe--cCcE
Confidence 56777777766654 2456666665544444443 4443
No 198
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=61.61 E-value=39 Score=36.50 Aligned_cols=62 Identities=11% Similarity=0.156 Sum_probs=38.1
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC---CHH-HHh------hCCeeEEecCCc--HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN---DAP-ALK------KADIGIAMGSGT--AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N---D~~-~l~------~A~vgIa~g~~~--~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|.|.. -.. ||. .|.|-++-.+.. ......||+++..
T Consensus 138 ~~PcTp~ail~ll~~y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs~t~~l~~~~~~ADIvI~A 213 (295)
T PRK14174 138 FVSCTPYGILELLGRYNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHSATKDIPSYTRQADILIAA 213 (295)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 455788766666665543 3899999999854 233 333 355555544322 3345678998864
No 199
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=61.39 E-value=36 Score=37.57 Aligned_cols=48 Identities=21% Similarity=0.203 Sum_probs=38.2
Q ss_pred EEecccCCCcHHHHHHHHHHHhC----CcEEEEEcCCC---HHH-HHHHHHHhCCC
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTA----GIRVIVVTGDN---KST-AESICHKIGAF 632 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~----gi~v~~~TGd~---~~~-a~~ia~~~gi~ 632 (992)
|++.-.+++-+++.++++.|++. |+++..+|... ... +..+.+++|+.
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~ 64 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVD 64 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCC
Confidence 66667788999999999999998 99999999665 333 45556778874
No 200
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=60.56 E-value=2.7e+02 Score=36.46 Aligned_cols=231 Identities=13% Similarity=0.162 Sum_probs=107.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeee-cCCceEE
Q 001949 94 LLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEM-LSNQLRV 172 (992)
Q Consensus 94 i~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~-~~g~~~V 172 (992)
++++++.........+..+++.++|++ ... ......| +.-|....+...|.+|-|.++++. .+..+-+
T Consensus 197 ~~i~~i~~~~~~~~~~~~~k~~~~L~~-~~~------~~~~v~V----~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPa 265 (1054)
T TIGR01657 197 LCIVFMSSTSISLSVYQIRKQMQRLRD-MVH------KPQSVIV----IRNGKWVTIASDELVPGDIVSIPRPEEKTMPC 265 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hhc------CCeeEEE----EECCEEEEEEcccCCCCCEEEEecCCCCEecc
Confidence 334444444444555566666665543 221 2223333 234889999999999999999951 1344556
Q ss_pred ecccccCCCccccccccccccc-----ccccCC---CCce-----eeecceEeeceEEEEEEE---------ecccccch
Q 001949 173 DQAILTGESCSVEKELDSIIAT-----NAVYQD---KTNI-----LFSGTVVVAGRARAVVVG---------VGANTAMG 230 (992)
Q Consensus 173 des~LtGEs~pv~K~~~~~~~~-----~~~~~~---~~n~-----l~~Gt~v~~g~~~~~V~~---------tG~~T~~g 230 (992)
|=-.+.|+. -+.-.. ...+ +.+... .++. ..++..+..|..+..+.. .-..|-..
T Consensus 266 D~~ll~g~~-~VdES~--LTGES~Pv~K~~~~~~~~~~~~~~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~TG~~ 342 (1054)
T TIGR01657 266 DSVLLSGSC-IVNESM--LTGESVPVLKFPIPDNGDDDEDLFLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRTGFS 342 (1054)
T ss_pred eEEEEeCcE-EEeccc--ccCCccceecccCCccccccccccccccccceEEEcCCEEEEEecCCCCCcEEEEEEeCCcc
Confidence 666666632 222111 1111 111000 0111 123456777776543321 11222211
Q ss_pred hHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHH
Q 001949 231 SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAV 310 (992)
Q Consensus 231 ~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~ 310 (992)
.....+.+.-....+....+++-...++.++++++++.+++.+... +.. -..+...+...+..+=...|.+
T Consensus 343 T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~--------~~~-~~~~~~~~l~~l~iiv~~vP~~ 413 (1054)
T TIGR01657 343 TSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL--------IKD-GRPLGKIILRSLDIITIVVPPA 413 (1054)
T ss_pred ccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHc-CCcHHHHHHHHHHHHHhhcCch
Confidence 1111111221222333444555555555555555544443321100 000 0112223333444555667888
Q ss_pred HHHHHHHhhhhhhhcccccccccccccccceEEEEecCCCccccCceEE
Q 001949 311 VTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSV 359 (992)
Q Consensus 311 ~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~~i~~DKTGTLT~n~m~v 359 (992)
+++++.++.....+ .|.+-+.+|.+-...-|-|..++
T Consensus 414 LP~~~ti~l~~~~~------------rL~k~~il~~~~~~ie~lG~v~v 450 (1054)
T TIGR01657 414 LPAELSIGINNSLA------------RLKKKGIFCTSPFRINFAGKIDV 450 (1054)
T ss_pred HHHHHHHHHHHHHH------------HHHHCCEEEcCcccceecceeeE
Confidence 88888888655332 33445566766665555555443
No 201
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=60.52 E-value=8 Score=40.77 Aligned_cols=96 Identities=13% Similarity=0.073 Sum_probs=53.5
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhh
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (992)
-++..++++.+++.|++. ++|+.....+.......|.... +. .....-.+.....+-+|+-
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~g~~-------------~~-----~i~~~g~~~~~~gKP~~~~ 200 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGAGYY-------------AE-----LIKQLGGKVIYSGKPYPAI 200 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecccHH-------------HH-----HHHHhCCcEecCCCCCHHH
Confidence 588999999999999997 7787665544322222221100 00 0000001111122333333
Q ss_pred HHHHHHHHhhc-CCEEEEEcCC-cCCHHHHhhCCeeE
Q 001949 674 KRMLVEALQNQ-NEVVAMTGDG-VNDAPALKKADIGI 708 (992)
Q Consensus 674 K~~iv~~l~~~-~~~v~~iGDg-~ND~~~l~~A~vgI 708 (992)
=..+.+.+... .+.++||||+ .+|..+-+.|++-.
T Consensus 201 ~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 201 FHKALKECSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred HHHHHHHcCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 34445555432 3579999999 59999999988754
No 202
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=60.08 E-value=45 Score=35.76 Aligned_cols=46 Identities=20% Similarity=0.308 Sum_probs=32.6
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHHH------HHHHhCCCCCc
Q 001949 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHL 635 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~---v~~~TGd~~~~a~~------ia~~~gi~~~~ 635 (992)
.++++++.++.++.+++.|++ .++..||++....+ .|+++|+....
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~ 65 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVL 65 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEE
Confidence 456778888888888887775 45677888766543 57778876543
No 203
>PLN03190 aminophospholipid translocase; Provisional
Probab=59.77 E-value=1.3e+02 Score=39.50 Aligned_cols=96 Identities=15% Similarity=0.115 Sum_probs=57.8
Q ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECC
Q 001949 53 VLKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNG 132 (992)
Q Consensus 53 l~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g 132 (992)
+.+.+...+..+..+..++..++..++. ... ..+...++-+++..++.. .++.+++++++..+... |.
T Consensus 103 lP~~L~eQF~r~aN~YFL~I~ilq~ip~---~s~-~~~~t~~~PL~~vl~v~~-----ike~~Ed~~r~k~d~~~---N~ 170 (1178)
T PLN03190 103 LPRNLFEQFHRVAYIYFLVIAVLNQLPQ---LAV-FGRGASILPLAFVLLVTA-----VKDAYEDWRRHRSDRIE---NN 170 (1178)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHhCCC---ccc-CCcchHHHHHHHHHHHHH-----HHHHHHHHHHHHhHHhh---cC
Confidence 5566666666666666665555554432 122 223344444444444443 46688888888776532 33
Q ss_pred EEEEeeCCCCCCCcEEEecCCCccCCceeeee
Q 001949 133 CFSILPAAELVPGDIVEVNVGCKIPADMRMIE 164 (992)
Q Consensus 133 ~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~ 164 (992)
+...+. .-|....++..|..|-|.+.+.
T Consensus 171 ~~~~v~----~~~~~~~i~~~~i~vGDiv~v~ 198 (1178)
T PLN03190 171 RLAWVL----VDDQFQEKKWKDIRVGEIIKIQ 198 (1178)
T ss_pred cEEEEE----ECCeEEEEeHHHCCCCCEEEEC
Confidence 333332 3577888999999999999996
No 204
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=59.39 E-value=65 Score=34.57 Aligned_cols=138 Identities=12% Similarity=0.100 Sum_probs=73.3
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHHH------HHHHhCCCCCccccc---------------------
Q 001949 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHLVDFV--------------------- 639 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~---v~~~TGd~~~~a~~------ia~~~gi~~~~~~~~--------------------- 639 (992)
..+++++.++.++.+++.|++ .++.-||++....+ .|+++|+......+.
T Consensus 10 a~~i~~~l~~~v~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 89 (282)
T PRK14169 10 SKKILADLKQTVAKLAQQDVTPTLAVVLVGSDPASEVYVRNKQRRAEDIGVRSLMFRLPEATTQADLLAKVAELNHDPDV 89 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 345677888888888877765 35667877665543 567778765432211
Q ss_pred -cccccchhhhcCCHHHHH------------------HHhcceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC--
Q 001949 640 -GRSYTASEFEELPAMQQT------------------VALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN-- 696 (992)
Q Consensus 640 -~~~~~~~~~~~~~~~~~~------------------~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N-- 696 (992)
+..+.-.-...+.+.... .+.....-|.-|||.-=.++++.++- .|+.|+++|.|..
T Consensus 90 ~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 169 (282)
T PRK14169 90 DAILVQLPLPAGLDEQAVIDAIDPDKDVDGFSPVSVGRLWANEPTVVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVG 169 (282)
T ss_pred CEEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhHHHhcCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccch
Confidence 111100000111111111 11111122455777666666666543 4899999999843
Q ss_pred --CHHHHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 697 --DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 697 --D~~~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
=+.||...|.-|.+- +.+ ......||+++..
T Consensus 170 kPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 170 RPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 133555555555443 222 2234568988754
No 205
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=58.44 E-value=46 Score=34.31 Aligned_cols=86 Identities=12% Similarity=0.156 Sum_probs=56.0
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHH----HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST----AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~----a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
.+-||+.+.++...+.|.+|..+|.|..+. +..=-++.|+...... ..++-
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~-------------------------~~llk 176 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLES-------------------------HLLLK 176 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCccccccc-------------------------ceEEe
Confidence 466899999999999999999999998776 3334455666542210 01111
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHhh
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVNDAPALKK 703 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~ 703 (992)
+ ....|..--+.+++.-.+|+.+||..+|-.....
T Consensus 177 k-~~k~Ke~R~~~v~k~~~iVm~vGDNl~DF~d~~~ 211 (274)
T COG2503 177 K-DKKSKEVRRQAVEKDYKIVMLVGDNLDDFGDNAY 211 (274)
T ss_pred e-CCCcHHHHHHHHhhccceeeEecCchhhhcchhh
Confidence 1 1223333334444456789999999999776544
No 206
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=57.12 E-value=59 Score=34.85 Aligned_cols=45 Identities=20% Similarity=0.349 Sum_probs=30.8
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHHH------HHHHhCCCCC
Q 001949 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDH 634 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~---v~~~TGd~~~~a~~------ia~~~gi~~~ 634 (992)
.++++++.++.++.+++.|++ .++.-||++....+ .|+++|+...
T Consensus 10 A~~i~~~ik~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~~~ 63 (282)
T PRK14182 10 AAKVKGEVATEVRALAARGVQTGLTVVRVGDDPASAIYVRGKRKDCEEVGITSV 63 (282)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 355677888888888877765 45667877765533 5677787654
No 207
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=56.63 E-value=2e+02 Score=37.00 Aligned_cols=186 Identities=15% Similarity=0.176 Sum_probs=100.0
Q ss_pred CCCCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCC-------Cce---eeecceE
Q 001949 142 LVPGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDK-------TNI---LFSGTVV 211 (992)
Q Consensus 142 Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~-------~n~---l~~Gt~v 211 (992)
+.-|..+.+...|.+|-|.+.++ .++.+-.|=-.|.+...-+.... ...+ ....+| .+. +-+...+
T Consensus 145 ~R~g~~~~i~a~eLVpGDiV~l~-~gd~vPAD~rLl~~~~l~VdEs~--LTGE-S~pv~K~~~~~~~~~~~~~~d~~n~l 220 (917)
T COG0474 145 LRDGKFVEIPASELVPGDIVLLE-AGDVVPADLRLLESSDLEVDESA--LTGE-SLPVEKQALPLTKSDAPLGLDRDNML 220 (917)
T ss_pred EeCCcEEEecHHHCCCCcEEEEC-CCCccccceEEEEecCceEEccc--ccCC-CcchhccccccccccccccCCccceE
Confidence 33788999999999999999996 23334455555555553222211 1111 111111 111 2456778
Q ss_pred eeceEEEEEEEecccccch---hHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHH
Q 001949 212 VAGRARAVVVGVGANTAMG---SIRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGA 288 (992)
Q Consensus 212 ~~g~~~~~V~~tG~~T~~g---~i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (992)
.+|+.+.--...|.-+.-| ++.+..... ....+.+..+++-...+...++.++++..++..... ++..
T Consensus 221 ~sGt~V~~G~~~giVvaTG~~T~~G~ia~~~-~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~-------~~~~- 291 (917)
T COG0474 221 FSGTTVVSGRAKGIVVATGFETEFGKIARLL-PTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-------LFRG- 291 (917)
T ss_pred EeCCEEEcceEEEEEEEEcCccHHHHHHHhh-ccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHhc-
Confidence 8888655555555555555 233333222 222256677777777777777777776666543321 0000
Q ss_pred HHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhhhhcccccccccccccccceE
Q 001949 289 IHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTT 342 (992)
Q Consensus 289 ~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l~~~~i~vk~~~~~e~lg~v~ 342 (992)
...+...+...++..=-+.|.++++...++...-.+ -+.|+...+..|-.++
T Consensus 292 ~~~~~~~~~~~v~l~va~IPegLp~~vti~la~g~~--~mak~~~ivr~l~avE 343 (917)
T COG0474 292 GNGLLESFLTALALAVAAVPEGLPAVVTIALALGAQ--RMAKDNAIVRSLNAIE 343 (917)
T ss_pred CccHHHHHHHHHHHHHhccccchHHHHHHHHHHHHH--HHHhccchhhccchhh
Confidence 001233444445555666788888888777654333 3445555555444443
No 208
>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=56.48 E-value=53 Score=35.29 Aligned_cols=62 Identities=13% Similarity=0.229 Sum_probs=39.0
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcC-CcCCHH---HHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGD-GVNDAP---ALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGD-g~ND~~---~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++...- .|+.++++|- |.-=.| +|..++.-+.+- +.+ ......||+++.-
T Consensus 137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~l~~~~~~ADIVI~a 208 (284)
T PRK14179 137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRNLAEVARKADILVVA 208 (284)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEe
Confidence 556777666666665543 3899999999 444444 466676666652 222 2335678998854
No 209
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=55.96 E-value=67 Score=34.61 Aligned_cols=111 Identities=14% Similarity=0.098 Sum_probs=59.4
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHH
Q 001949 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTV 658 (992)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 658 (992)
-+-.++|. . .+---+++.++++.|++.|+ ..++|........ . -+..... .+..+..+ ..
T Consensus 132 ~~~Vvv~~-d-~~~~y~~i~~~l~~L~~~g~-~~i~Tn~d~~~~~--~--~~~~~~~--------~g~~~~~i-----~~ 191 (279)
T TIGR01452 132 VGAVVVGY-D-EHFSYAKLREACAHLREPGC-LFVATNRDPWHPL--S--DGSRTPG--------TGSLVAAI-----ET 191 (279)
T ss_pred CCEEEEec-C-CCCCHHHHHHHHHHHhcCCC-EEEEeCCCCCCCC--c--CCCcccC--------hHHHHHHH-----HH
Confidence 34555654 1 12247899999999999998 5667665432110 0 0110000 00000000 00
Q ss_pred Hhc-ceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCeeEE
Q 001949 659 ALQ-HMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGIA 709 (992)
Q Consensus 659 ~~~-~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgIa 709 (992)
... +.....+-+|+-=..+++.+....+.++||||.. .|+.+-++|++--.
T Consensus 192 ~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~aGi~si 244 (279)
T TIGR01452 192 ASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTV 244 (279)
T ss_pred HhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHHcCCcEE
Confidence 000 1111233444444455566655678999999994 99999999988644
No 210
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=55.78 E-value=88 Score=40.30 Aligned_cols=21 Identities=29% Similarity=0.392 Sum_probs=13.5
Q ss_pred CCEEEEeeCCCCCCCcEEEec
Q 001949 131 NGCFSILPAAELVPGDIVEVN 151 (992)
Q Consensus 131 ~g~~~~i~~~~Lv~GDII~l~ 151 (992)
-|....+...|.+|.|.+.++
T Consensus 186 ~GDiV~l~~Gd~IPaD~~li~ 206 (941)
T TIGR01517 186 VGDIVSLSTGDVVPADGVFIS 206 (941)
T ss_pred CCCEEEECCCCEecccEEEEE
Confidence 455666666666666666664
No 211
>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=54.60 E-value=86 Score=33.74 Aligned_cols=62 Identities=15% Similarity=0.151 Sum_probs=38.0
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcCC----HHHHhh------CCeeEEecCCcH--HHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKK------ADIGIAMGSGTA--VAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND----~~~l~~------A~vgIa~g~~~~--~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.++.+|-|..= +-||.. |.|-++-....+ .....||+++..
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~~~~ADIVI~A 211 (286)
T PRK14184 136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEECREADFLFVA 211 (286)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 556788766666666553 38999999998431 334544 555555443322 345678888754
No 212
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=54.15 E-value=2.7e+02 Score=36.48 Aligned_cols=247 Identities=14% Similarity=0.114 Sum_probs=121.9
Q ss_pred HHHhhhhHHHHHHHHHHHHHHHHHhcCCCCcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCE
Q 001949 54 LKQFDDLLVKILIAAAVISFFLALINGETGLTAFLEPSVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGC 133 (992)
Q Consensus 54 ~~~f~~~~~~~l~~~~iis~~~~~~~~~~~~~~~~~~~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~ 133 (992)
++.|.+.+..+..+..++..++.+++ ... ...+...++.+++...+. ..++.+++++++..++.. +.+
T Consensus 18 p~~l~~qf~~~~N~yfl~i~ilq~ip---~~s-~~~~~t~~~pL~~v~~~~-----~~~~~~ed~~r~~~d~~~---n~~ 85 (1057)
T TIGR01652 18 PKNLFEQFKRFANLYFLVVALLQQVP---ILS-PTYRGTSIVPLAFVLIVT-----AIKEAIEDIRRRRRDKEV---NNR 85 (1057)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHcCC---CcC-CCCccHhHHhHHHHHHHH-----HHHHHHHHHHHHHhHHHH---hCc
Confidence 56677777777766666666555442 112 223344444444433333 357788888887776432 223
Q ss_pred EEEeeCCCCCC-CcEEEecCCCccCCceeeeeecCCc------eEEecccccCCCccccccccccccc--cccc------
Q 001949 134 FSILPAAELVP-GDIVEVNVGCKIPADMRMIEMLSNQ------LRVDQAILTGESCSVEKELDSIIAT--NAVY------ 198 (992)
Q Consensus 134 ~~~i~~~~Lv~-GDII~l~~G~~iPaD~~ll~~~~g~------~~Vdes~LtGEs~pv~K~~~~~~~~--~~~~------ 198 (992)
...+- .. |....+...|..|-|.++++ .|+ ..+..|.-+|...--+......... ....
T Consensus 86 ~~~v~----~~~~~~~~i~~~~l~~GDiv~l~--~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~ 159 (1057)
T TIGR01652 86 LTEVL----EGHGQFVEIPWKDLRVGDIVKVK--KDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM 159 (1057)
T ss_pred EEEEE----CCCCcEEEeeeecccCCCEEEEc--CCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhcc
Confidence 33322 22 67889999999999999996 332 3344444344432222111111100 1100
Q ss_pred -----------------CCCCceeeecceEeec-eE----------EE-EEE----EecccccchhHHHHhccCCCCCCc
Q 001949 199 -----------------QDKTNILFSGTVVVAG-RA----------RA-VVV----GVGANTAMGSIRDSMLQTEDEVTP 245 (992)
Q Consensus 199 -----------------~~~~n~l~~Gt~v~~g-~~----------~~-~V~----~tG~~T~~g~i~~~~~~~~~~~~~ 245 (992)
++..-..|.|+...++ .. .| .|. ..|--.+-|.-.+........+.
T Consensus 160 ~~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~~~- 238 (1057)
T TIGR01652 160 LDEDDIKNFSGEIECEQPNASLYSFQGNMTINGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQAPS- 238 (1057)
T ss_pred CChhhHhhceEEEEEcCCCCcceEEEEEEEECCCCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCCcc-
Confidence 0011135777777655 10 11 111 23444455666666554333322
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCc----cchH-------HHHHHHHHHHHHHHHhcCCchHHHHHHH
Q 001949 246 LKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHG----GFLR-------GAIHYFKIAVALAVAAIPEGLPAVVTTC 314 (992)
Q Consensus 246 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~~~i~l~~~~iP~~L~~~~~~~ 314 (992)
-...+++-...++.+++++.+++.++........... .|.. +....+...+..++...+..+|.++.+.
T Consensus 239 k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~v~ 318 (1057)
T TIGR01652 239 KRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLYVS 318 (1057)
T ss_pred cccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeeeeh
Confidence 2345677666666665555554444433332222111 1110 0011233345556667777888887777
Q ss_pred HHHhh
Q 001949 315 LALGT 319 (992)
Q Consensus 315 ~~~~~ 319 (992)
+-+..
T Consensus 319 l~l~~ 323 (1057)
T TIGR01652 319 LELVK 323 (1057)
T ss_pred HHHHH
Confidence 76663
No 213
>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=53.49 E-value=64 Score=34.62 Aligned_cols=62 Identities=16% Similarity=0.199 Sum_probs=37.9
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|-|.. =+.||...|.-|.+- +.+ ......||+++..
T Consensus 136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~~~~~~ADIvIsA 207 (282)
T PRK14166 136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLSLYTRQADLIIVA 207 (282)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 455777666666666543 4899999999854 233555555555542 222 2234568988754
No 214
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=53.15 E-value=1.9e+02 Score=26.88 Aligned_cols=36 Identities=25% Similarity=0.344 Sum_probs=25.7
Q ss_pred HHHHHHHhhcCCEEEEEcCCcC--CHHHHhhCCeeEEec
Q 001949 675 RMLVEALQNQNEVVAMTGDGVN--DAPALKKADIGIAMG 711 (992)
Q Consensus 675 ~~iv~~l~~~~~~v~~iGDg~N--D~~~l~~A~vgIa~g 711 (992)
.++++.+ .+-+.+...|-|.+ |..++++-+|-++-.
T Consensus 52 ~~~l~~~-~~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 52 AEVLEAA-PNLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp HHHHHHH-TT-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred HHHHhcc-ceeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 4555655 44568888899987 899999999999853
No 215
>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.97 E-value=76 Score=34.34 Aligned_cols=62 Identities=16% Similarity=0.201 Sum_probs=36.9
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEe--cCCc--HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAM--GSGT--AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~--g~~~--~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++.++- .|+.|+++|-|.. =+.||...|.-|.+ .... ......||+++..
T Consensus 137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~~~~~ADIvIsA 208 (297)
T PRK14186 137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLASITREADILVAA 208 (297)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 445777766666666643 3899999999843 13345444444443 2221 2334668998864
No 216
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.60 E-value=91 Score=33.40 Aligned_cols=62 Identities=18% Similarity=0.230 Sum_probs=39.0
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCcH---HHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGTA---VAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~~---~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++.++- .|+.|+++|.|.. =+.||...|.-|.+- +.+. .....||+++..
T Consensus 137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~~~~~~ADIvIsA 208 (278)
T PRK14172 137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLKEVCKKADILVVA 208 (278)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 456788776677776653 4899999999854 234566666555543 2222 234568998754
No 217
>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.37 E-value=80 Score=34.17 Aligned_cols=138 Identities=17% Similarity=0.197 Sum_probs=73.0
Q ss_pred cCCCcHHHHHHHHHHHhCCcE---EEEEcCCCHHHHHH------HHHHhCCCCCccccc---------------------
Q 001949 590 LDPPREEVKNAMLSCMTAGIR---VIVVTGDNKSTAES------ICHKIGAFDHLVDFV--------------------- 639 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~---v~~~TGd~~~~a~~------ia~~~gi~~~~~~~~--------------------- 639 (992)
.+.++++.++.++.+++.|++ .++.-||++....+ .|+++|+......+.
T Consensus 11 A~~i~~~l~~~v~~l~~~g~~P~LaiI~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~~V 90 (297)
T PRK14167 11 AAQIRDDLTDAIETLEDAGVTPGLATVLMSDDPASETYVSMKQRDCEEVGIEAIDVEIDPDAPAEELYDTIDELNADEDV 90 (297)
T ss_pred HHHHHHHHHHHHHHHHhCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCCCC
Confidence 356777888888888887774 35667877665433 567778765432211
Q ss_pred -cccccchhhhcCCHHHHH------------------HHhcceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC--
Q 001949 640 -GRSYTASEFEELPAMQQT------------------VALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN-- 696 (992)
Q Consensus 640 -~~~~~~~~~~~~~~~~~~------------------~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N-- 696 (992)
|..+.-.-...+.+.... .+...-.-|.-|||.-=.++++.++- .|+.|+++|-|..
T Consensus 91 ~GIlvq~PLP~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVG 170 (297)
T PRK14167 91 HGILVQMPVPDHVDDREVLRRIDPAKDVDGFHPENVGRLVAGDARFKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVG 170 (297)
T ss_pred CEEEEcCCCCCCCCHHHHHhccCcccCcccCChhhhHHHhCCCCCCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccH
Confidence 111100000111111111 11111123445778766666666653 4899999999854
Q ss_pred -C-HHHHhh------CCeeEEecCCc--HHHHhccCeeecC
Q 001949 697 -D-APALKK------ADIGIAMGSGT--AVAKSASDMVLAD 727 (992)
Q Consensus 697 -D-~~~l~~------A~vgIa~g~~~--~~~~~~ad~vl~~ 727 (992)
- +-||.. |-|-++=.... ......||+++..
T Consensus 171 kPla~lL~~~~~~~~aTVtvchs~T~~l~~~~~~ADIvIsA 211 (297)
T PRK14167 171 KPMANLLIQKADGGNATVTVCHSRTDDLAAKTRRADIVVAA 211 (297)
T ss_pred HHHHHHHhcCccCCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 1 334443 33444433222 2345678998863
No 218
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.24 E-value=74 Score=34.19 Aligned_cols=62 Identities=15% Similarity=0.122 Sum_probs=36.5
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEe--cCCcH--HHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAM--GSGTA--VAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~--g~~~~--~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|.|.. =+.+|...+--+.+ ....+ .....||+++..
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l~~~~~~ADIvV~A 207 (285)
T PRK14191 136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDLSFYTQNADIVCVG 207 (285)
T ss_pred CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCEEEEe
Confidence 455788766666666654 3899999999832 23345444444433 32222 234568888754
No 219
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=51.13 E-value=98 Score=33.28 Aligned_cols=63 Identities=13% Similarity=0.149 Sum_probs=36.4
Q ss_pred EEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCC--eeEEecCCc--HHHHhccCeeecC
Q 001949 665 LFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKAD--IGIAMGSGT--AVAKSASDMVLAD 727 (992)
Q Consensus 665 v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~--vgIa~g~~~--~~~~~~ad~vl~~ 727 (992)
-|.-|||.-=.++++.++- .|+.|+.+|-|.. =+.||...| |-++-.... ......||+++..
T Consensus 136 ~~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l~~~~~~ADIvI~A 208 (284)
T PRK14190 136 TFLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNLAELTKQADILIVA 208 (284)
T ss_pred CCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhHHHHHHhCCEEEEe
Confidence 3556788766666666653 4899999998743 133444444 444322222 2244668888753
No 220
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=50.09 E-value=2.2e+02 Score=30.72 Aligned_cols=166 Identities=16% Similarity=0.210 Sum_probs=86.2
Q ss_pred cCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHH--HHHHHHHHHhCCcEE
Q 001949 534 PMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREE--VKNAMLSCMTAGIRV 611 (992)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~i~~l~~~gi~v 611 (992)
++.++.++++.+.++++.. +|.+. -|+.+..-|.+-.. +...++.+++.||.+
T Consensus 10 ~va~~i~~~lk~~i~~l~~-~g~~p------------------------~Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 64 (285)
T PRK14189 10 ALSKQLRAEAAQRAAALTA-RGHQP------------------------GLAVILVGDNPASQVYVRNKVKACEDNGFHS 64 (285)
T ss_pred HHHHHHHHHHHHHHHHHHh-CCCCC------------------------eEEEEEeCCCchHHHHHHHHHHHHHHcCCEE
Confidence 3445667777777777654 44321 14444555554433 345678888999987
Q ss_pred EEEc--CC-CHHHHHHHHHHhCCCCCccccccccccc------------------hhhhcCCHHHHHHHhcceeEEeecC
Q 001949 612 IVVT--GD-NKSTAESICHKIGAFDHLVDFVGRSYTA------------------SEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 612 ~~~T--Gd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+.- .+ ..+.....-++++-+. .++|..+.- .+.+.++......+...-.-|.-||
T Consensus 65 ~~~~l~~~~~~~~l~~~I~~lN~d~---~V~GIlvq~Plp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~~~~~~~PcT 141 (285)
T PRK14189 65 LKDRYPADLSEAELLARIDELNRDP---KIHGILVQLPLPKHIDSHKVIEAIAPEKDVDGFHVANAGALMTGQPLFRPCT 141 (285)
T ss_pred EEEECCCCCCHHHHHHHHHHHcCCC---CCCeEEEeCCCCCCCCHHHHHhhcCcccCcccCChhhhhHhhCCCCCCcCCC
Confidence 6553 33 2334444555554332 222222211 1222222222222222223355677
Q ss_pred hhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc-H--HHHhccCeeecC
Q 001949 671 PSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT-A--VAKSASDMVLAD 727 (992)
Q Consensus 671 p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~-~--~~~~~ad~vl~~ 727 (992)
|.-=.++++..+- .|+.|+.+|-|.. =+.+|...+.-+.+- +.+ + .....||+++..
T Consensus 142 p~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 142 PYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 7666666665543 3899999999865 233555555555432 222 2 344678998864
No 221
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=49.40 E-value=1.4e+02 Score=30.51 Aligned_cols=10 Identities=10% Similarity=0.281 Sum_probs=6.5
Q ss_pred HHHHHHhhcc
Q 001949 961 VLKFFSRKSS 970 (992)
Q Consensus 961 i~K~~~r~~~ 970 (992)
++.|++|+|.
T Consensus 193 ~~~~lkkk~~ 202 (206)
T PF06570_consen 193 LRFYLKKKYN 202 (206)
T ss_pred HHHHHHHHhC
Confidence 5567777764
No 222
>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=48.57 E-value=1.3e+02 Score=33.14 Aligned_cols=63 Identities=16% Similarity=0.131 Sum_probs=37.7
Q ss_pred EEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CC---cHHHHhccCeeecC
Q 001949 665 LFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SG---TAVAKSASDMVLAD 727 (992)
Q Consensus 665 v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~---~~~~~~~ad~vl~~ 727 (992)
-|.-|||..=.++++..+- .|+.|+++|-+.. =+.||...|.-|.+- +- -......||+++..
T Consensus 192 ~~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~~~~~~ADIvIsA 264 (345)
T PLN02897 192 LFVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPEQITRKADIVIAA 264 (345)
T ss_pred CCcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHHHHHhhCCEEEEc
Confidence 3556777666666665543 3899999999843 233565555555542 11 12344568988753
No 223
>PTZ00445 p36-lilke protein; Provisional
Probab=47.50 E-value=62 Score=32.90 Aligned_cols=30 Identities=20% Similarity=0.114 Sum_probs=26.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHH
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKST 621 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~ 621 (992)
.++|+.+.-+++|+++||++.++|=-...+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~ 104 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL 104 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh
Confidence 379999999999999999999999766544
No 224
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=45.11 E-value=2.3e+02 Score=36.27 Aligned_cols=20 Identities=30% Similarity=0.458 Sum_probs=10.6
Q ss_pred CEEEEeeCCCCCCCcEEEec
Q 001949 132 GCFSILPAAELVPGDIVEVN 151 (992)
Q Consensus 132 g~~~~i~~~~Lv~GDII~l~ 151 (992)
|....+...|.+|-|.+.++
T Consensus 138 GDiv~l~~Gd~IPaDg~ii~ 157 (884)
T TIGR01522 138 GDLVCLSVGDRVPADLRIVE 157 (884)
T ss_pred CCEEEecCCCEEeeeEEEEE
Confidence 44555555555555555554
No 225
>PRK11507 ribosome-associated protein; Provisional
Probab=44.61 E-value=28 Score=28.45 Aligned_cols=26 Identities=19% Similarity=0.259 Sum_probs=23.2
Q ss_pred EEEECCEEEEeeCCCCCCCcEEEecC
Q 001949 127 TVLRNGCFSILPAAELVPGDIVEVNV 152 (992)
Q Consensus 127 ~V~R~g~~~~i~~~~Lv~GDII~l~~ 152 (992)
.|..||+.+.-.-..|.|||+|.+..
T Consensus 38 ~V~VNGeve~rRgkKl~~GD~V~~~g 63 (70)
T PRK11507 38 QVKVDGAVETRKRCKIVAGQTVSFAG 63 (70)
T ss_pred ceEECCEEecccCCCCCCCCEEEECC
Confidence 57789999999999999999998853
No 226
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=43.61 E-value=27 Score=31.99 Aligned_cols=41 Identities=15% Similarity=0.247 Sum_probs=31.3
Q ss_pred CCcHHHHHHHHHHHhCCcE-EEEEcCCCHHHHHHHHHHhCCC
Q 001949 592 PPREEVKNAMLSCMTAGIR-VIVVTGDNKSTAESICHKIGAF 632 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~-v~~~TGd~~~~a~~ia~~~gi~ 632 (992)
-+.+.+.+.++++.+.|++ +|+.+|...+.+...|++.|+.
T Consensus 63 ~~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi~ 104 (116)
T PF13380_consen 63 VPPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGIR 104 (116)
T ss_dssp S-HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-E
T ss_pred cCHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCCE
Confidence 3677889999999999996 9999999999999999998875
No 227
>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=41.67 E-value=1.2e+02 Score=32.66 Aligned_cols=62 Identities=19% Similarity=0.275 Sum_probs=36.2
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcCC----HHHHhh--CCeeEEec-CCc---HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVND----APALKK--ADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~ND----~~~l~~--A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
+.-|||.-=.++++..+- .|+.++.+|-+..= +.||.. .+..|.+- +.+ ......||+++..
T Consensus 137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~~~~k~ADIvV~A 210 (284)
T PRK14193 137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLAAHTRRADIIVAA 210 (284)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHHHHHHhCCEEEEe
Confidence 345777766666666653 38999999998541 234443 45444432 222 2234568888753
No 228
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=41.14 E-value=1.4e+02 Score=29.66 Aligned_cols=108 Identities=19% Similarity=0.190 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHH-HHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhh
Q 001949 595 EEVKNAMLSCMTAGIRVIVVTGDNKST-AESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSH 673 (992)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~~~TGd~~~~-a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~ 673 (992)
-|..+++.++++.|-++.+++=++... ...+.+.+|+.- ..+.=.++++
T Consensus 64 ~Dil~al~~a~~~~~~Iavv~~~~~~~~~~~~~~ll~~~i------------------------------~~~~~~~~~e 113 (176)
T PF06506_consen 64 FDILRALAKAKKYGPKIAVVGYPNIIPGLESIEELLGVDI------------------------------KIYPYDSEEE 113 (176)
T ss_dssp HHHHHHHHHCCCCTSEEEEEEESS-SCCHHHHHHHHT-EE------------------------------EEEEESSHHH
T ss_pred hHHHHHHHHHHhcCCcEEEEecccccHHHHHHHHHhCCce------------------------------EEEEECCHHH
Confidence 355667777777777777776665543 566666676532 2444467888
Q ss_pred HHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecCCcHHHHhccCeeecCCCchHHHHHHHHHHHHHHHHHH
Q 001949 674 KRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGSGTAVAKSASDMVLADDNFATIVAAVAEGRAIYNNTKQ 749 (992)
Q Consensus 674 K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~~~~~~~~~ad~vl~~~~~~~i~~~i~~gR~~~~~i~~ 749 (992)
-...++.++..| .-+.+|++.- +.+-++.|+ ..++...+..++..++.+++.+....++
T Consensus 114 ~~~~i~~~~~~G-~~viVGg~~~-~~~A~~~gl---------------~~v~i~sg~esi~~Al~eA~~i~~~~~~ 172 (176)
T PF06506_consen 114 IEAAIKQAKAEG-VDVIVGGGVV-CRLARKLGL---------------PGVLIESGEESIRRALEEALRIARARRR 172 (176)
T ss_dssp HHHHHHHHHHTT---EEEESHHH-HHHHHHTTS---------------EEEESS--HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-CcEEECCHHH-HHHHHHcCC---------------cEEEEEecHHHHHHHHHHHHHHHHHHHH
Confidence 888999999888 4566677632 333344333 4456667788999999999998877654
No 229
>PLN02616 tetrahydrofolate dehydrogenase/cyclohydrolase, putative
Probab=40.78 E-value=1.6e+02 Score=32.72 Aligned_cols=62 Identities=13% Similarity=0.222 Sum_probs=34.9
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEe--cCC--cHHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAM--GSG--TAVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~--g~~--~~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++...- .|+.|+.+|-+.. =+-||...|--|.+ ... -......||+++..
T Consensus 210 f~PCTp~avielL~~y~i~l~GK~vvVIGRS~iVGkPLa~LL~~~~ATVTicHs~T~nl~~~~r~ADIVIsA 281 (364)
T PLN02616 210 FVPCTPKGCIELLHRYNVEIKGKRAVVIGRSNIVGMPAALLLQREDATVSIVHSRTKNPEEITREADIIISA 281 (364)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCeEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 456777665555555443 3889999998743 13345544444443 211 12334567888753
No 230
>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=38.42 E-value=2.1e+02 Score=30.80 Aligned_cols=62 Identities=19% Similarity=0.198 Sum_probs=35.7
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|.|.. =+-||...|--+.+- +-+ ......||+++..
T Consensus 136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~~~~~~ADIvV~A 207 (281)
T PRK14183 136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLKAHTKKADIVIVG 207 (281)
T ss_pred CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHHHHHhhCCEEEEe
Confidence 445777665566665543 3899999999833 133454444444432 222 2234578988754
No 231
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=38.35 E-value=42 Score=32.60 Aligned_cols=43 Identities=16% Similarity=0.098 Sum_probs=38.3
Q ss_pred cCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC
Q 001949 590 LDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD 633 (992)
Q Consensus 590 ~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~ 633 (992)
.=.+||++.+.+++|++. +++++.|.-....|..+.+.++...
T Consensus 56 ~v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~~ 98 (156)
T TIGR02250 56 LTKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPDG 98 (156)
T ss_pred EEEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcCC
Confidence 345899999999999955 9999999999999999999998764
No 232
>PF13275 S4_2: S4 domain; PDB: 1P9K_A.
Probab=37.92 E-value=16 Score=29.41 Aligned_cols=25 Identities=36% Similarity=0.545 Sum_probs=14.2
Q ss_pred EEEECCEEEEeeCCCCCCCcEEEec
Q 001949 127 TVLRNGCFSILPAAELVPGDIVEVN 151 (992)
Q Consensus 127 ~V~R~g~~~~i~~~~Lv~GDII~l~ 151 (992)
.|..||+.+.-....|.+||+|.+.
T Consensus 34 ~V~VNGe~e~rrg~Kl~~GD~V~~~ 58 (65)
T PF13275_consen 34 EVKVNGEVETRRGKKLRPGDVVEID 58 (65)
T ss_dssp HHEETTB----SS----SSEEEEET
T ss_pred ceEECCEEccccCCcCCCCCEEEEC
Confidence 4667999999999999999999983
No 233
>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.48 E-value=1.8e+02 Score=31.52 Aligned_cols=63 Identities=17% Similarity=0.129 Sum_probs=36.4
Q ss_pred EEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 665 LFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 665 v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
-|.-|||.-=.++++..+- .|+.++++|-|.. =+-||...|--|.+- +.+ ......||+++..
T Consensus 138 ~~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~~~~~~ADIvVsA 210 (294)
T PRK14187 138 CLIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLADYCSKADILVAA 210 (294)
T ss_pred CccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 3556788766666666543 3889999998743 133455444444432 212 2234567888753
No 234
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=37.44 E-value=5.4e+02 Score=32.91 Aligned_cols=36 Identities=17% Similarity=0.429 Sum_probs=21.8
Q ss_pred CcEEEecCCCccCCceeeeeecCCceEEecccccCCC
Q 001949 145 GDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181 (992)
Q Consensus 145 GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs 181 (992)
|....+...|.+|-|.++++. +..+-+|=-.+.|+.
T Consensus 139 g~~~~I~~~eLv~GDiV~l~~-Gd~VPaDg~li~g~~ 174 (867)
T TIGR01524 139 GSMDEVPIDALVPGDLIELAA-GDIIPADARVISARD 174 (867)
T ss_pred CeEEEEEhhcCCCCCEEEECC-CCEEcccEEEEecCc
Confidence 666777777888888777751 223344544555544
No 235
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=37.20 E-value=69 Score=34.49 Aligned_cols=46 Identities=13% Similarity=0.325 Sum_probs=30.8
Q ss_pred ccCCCcHHHHHHHHHHHhCCcEE---EEEcCCCHHHHHH------HHHHhCCCCC
Q 001949 589 MLDPPREEVKNAMLSCMTAGIRV---IVVTGDNKSTAES------ICHKIGAFDH 634 (992)
Q Consensus 589 ~~d~~~~~~~~~i~~l~~~gi~v---~~~TGd~~~~a~~------ia~~~gi~~~ 634 (992)
+.++++++.++.++.+++.|++. +++-||++....+ .|+++|+...
T Consensus 11 ia~~i~~~~~~~v~~l~~~g~~p~Laii~vg~~~as~~Yv~~k~k~a~~~Gi~~~ 65 (286)
T PRK14175 11 IAKDYRQGLQDQVEALKEKGFTPKLSVILVGNDGASQSYVRSKKKAAEKIGMISE 65 (286)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCEEE
Confidence 34566778888888888777653 5557877765543 5677787653
No 236
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=36.14 E-value=96 Score=27.86 Aligned_cols=14 Identities=7% Similarity=0.135 Sum_probs=6.2
Q ss_pred HHHHHHHHHHHHHH
Q 001949 106 ITETNAEKALEELR 119 (992)
Q Consensus 106 ~~~~k~~~~~~~l~ 119 (992)
...+|.++..+++.
T Consensus 37 RpqkK~~k~~~~~~ 50 (106)
T PRK05585 37 RPQQKRQKEHKKML 50 (106)
T ss_pred cHHHHHHHHHHHHH
Confidence 33444444444443
No 237
>PF03120 DNA_ligase_OB: NAD-dependent DNA ligase OB-fold domain; InterPro: IPR004150 DNA ligases catalyse the crucial step of joining the breaks in duplex DNA during DNA replication, repair and recombination, utilizing either ATP or NAD(+) as a cofactor []. This family is a small domain found after the adenylation domain DNA_ligase_N in NAD+-dependent ligases (IPR001679 from INTERPRO). OB-fold domains generally are involved in nucleic acid binding.; GO: 0003911 DNA ligase (NAD+) activity, 0006260 DNA replication, 0006281 DNA repair; PDB: 2OWO_A 1TAE_A 3UQ8_A 1DGS_A 1V9P_B 3SGI_A.
Probab=35.70 E-value=16 Score=30.92 Aligned_cols=23 Identities=30% Similarity=0.424 Sum_probs=16.7
Q ss_pred EeeCCCCCCCcEEEe-cCCCccCC
Q 001949 136 ILPAAELVPGDIVEV-NVGCKIPA 158 (992)
Q Consensus 136 ~i~~~~Lv~GDII~l-~~G~~iPa 158 (992)
.+...+|.+||.|.+ ++||.||-
T Consensus 44 ~i~~~~i~~Gd~V~V~raGdVIP~ 67 (82)
T PF03120_consen 44 YIKELDIRIGDTVLVTRAGDVIPK 67 (82)
T ss_dssp HHHHTT-BBT-EEEEEEETTTEEE
T ss_pred HHHHcCCCCCCEEEEEECCCccce
Confidence 345568999998887 68999996
No 238
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.41 E-value=2.8e+02 Score=29.90 Aligned_cols=167 Identities=11% Similarity=0.165 Sum_probs=85.3
Q ss_pred cCCHHHHHHHHHHHHHHhhccchhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHH--HHHHHHHHHhCCcEE
Q 001949 534 PMTANIRAELESRLNSLAGKEALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREE--VKNAMLSCMTAGIRV 611 (992)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~--~~~~i~~l~~~gi~v 611 (992)
++.++.++++.+.++++.. +|-+.- . |..+...|.+... +...++.+++.||.+
T Consensus 10 ~ia~~i~~~lk~~i~~l~~-~~~~~P----------------------~-Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~ 65 (284)
T PRK14177 10 KLSEKIRNEIRETIEERKT-KNKRIP----------------------K-LATILVGNNPASETYVSMKVKACHKVGMGS 65 (284)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCCCC----------------------e-EEEEEeCCChhHHHHHHHHHHHHHHcCCEE
Confidence 3455667777777777754 322111 1 3344444443333 334578889999987
Q ss_pred EEE--cCC-CHHHHHHHHHHhCCCCCcccccccccc------------------chhhhcCCHHHHHHHhcceeEEeecC
Q 001949 612 IVV--TGD-NKSTAESICHKIGAFDHLVDFVGRSYT------------------ASEFEELPAMQQTVALQHMALFTRVE 670 (992)
Q Consensus 612 ~~~--TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~v~~r~~ 670 (992)
.+. ..+ +.+.....-++++-+.. ++|..+. ..+.+.++......+.....-|.-||
T Consensus 66 ~~~~l~~~~s~~el~~~I~~lN~D~~---V~GIlvqlPLp~~i~~~~i~~~I~p~KDVDGl~~~n~g~l~~g~~~~~PcT 142 (284)
T PRK14177 66 EMIRLKEQTTTEELLGVIDKLNLDPN---VDGILLQHPVPSQIDERAAFDRIALEKDVDGVTTLSFGKLSMGVETYLPCT 142 (284)
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCC---CCeEEEcCCCCCCCCHHHHHhccCcccccccCChhhHHHHHcCCCCCCCCC
Confidence 664 443 44445555556654321 1222111 11222333333333333323456678
Q ss_pred hhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCcH---HHHhccCeeecC
Q 001949 671 PSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGTA---VAKSASDMVLAD 727 (992)
Q Consensus 671 p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~~---~~~~~ad~vl~~ 727 (992)
|.-=.++++..+- .|+.|+++|-|.. =+.||...|.-+.+- +.+. .....||+++..
T Consensus 143 p~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIsA 209 (284)
T PRK14177 143 PYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVGA 209 (284)
T ss_pred HHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 8666666665543 3889999998743 133455444444442 2221 234567888753
No 239
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=35.39 E-value=2.2e+02 Score=30.41 Aligned_cols=32 Identities=16% Similarity=0.335 Sum_probs=21.1
Q ss_pred hhhHHHHHHHHhhcCCEEEEEcCCcCCHHHHh
Q 001949 671 PSHKRMLVEALQNQNEVVAMTGDGVNDAPALK 702 (992)
Q Consensus 671 p~~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~ 702 (992)
+++-.++++.+++....-+++|=|.|+....+
T Consensus 187 ~~~~~~~i~~ir~~t~~Pi~vGFGI~~~e~~~ 218 (263)
T CHL00200 187 DKKLKKLIETIKKMTNKPIILGFGISTSEQIK 218 (263)
T ss_pred cHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 34456677777776555677899999655433
No 240
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=35.27 E-value=1e+02 Score=31.88 Aligned_cols=100 Identities=13% Similarity=0.065 Sum_probs=65.3
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhC-CCCCccccccccc-cchhhhcCCHHHHHHHhcceeEEeec
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIG-AFDHLVDFVGRSY-TASEFEELPAMQQTVALQHMALFTRV 669 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~g-i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~r~ 669 (992)
.+-||+.+.++.|+..|+.+.++|+.+..++..-.+..+ +..... ..+. ++.++..- ..
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~---~~v~~d~~~v~~g----------------KP 152 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFS---HVVLGDDPEVKNG----------------KP 152 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcC---CCeecCCccccCC----------------CC
Confidence 345599999999999999999999998777665554444 222110 1111 22222221 23
Q ss_pred ChhhHHHHHHHHhhcC-CEEEEEcCCcCCHHHHhhCCeeEEe
Q 001949 670 EPSHKRMLVEALQNQN-EVVAMTGDGVNDAPALKKADIGIAM 710 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~-~~v~~iGDg~ND~~~l~~A~vgIa~ 710 (992)
.|+-=....+.+.... ..++++.|..+=..|-++|+.=+-+
T Consensus 153 ~Pdi~l~A~~~l~~~~~~k~lVfeds~~Gv~aa~aagm~vi~ 194 (222)
T KOG2914|consen 153 DPDIYLKAAKRLGVPPPSKCLVFEDSPVGVQAAKAAGMQVVG 194 (222)
T ss_pred CchHHHHHHHhcCCCCccceEEECCCHHHHHHHHhcCCeEEE
Confidence 4554455666666666 7888888888888888888776654
No 241
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=35.22 E-value=94 Score=26.58 Aligned_cols=13 Identities=38% Similarity=0.314 Sum_probs=5.8
Q ss_pred CCCCCcEEEecCC
Q 001949 141 ELVPGDIVEVNVG 153 (992)
Q Consensus 141 ~Lv~GDII~l~~G 153 (992)
+|+|||-|....|
T Consensus 37 ~L~~Gd~VvT~gG 49 (84)
T TIGR00739 37 SLKKGDKVLTIGG 49 (84)
T ss_pred hCCCCCEEEECCC
Confidence 3444444444443
No 242
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=34.31 E-value=9.1e+02 Score=31.03 Aligned_cols=86 Identities=13% Similarity=0.164 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCC--CCcEEEecCCCccCCceeeeeecCCc
Q 001949 93 ILLILAANAAVGVITET-NAEKALEELRAYQADIATVLRNGCFSILPAAELV--PGDIVEVNVGCKIPADMRMIEMLSNQ 169 (992)
Q Consensus 93 ii~~i~~~~~~~~~~~~-k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv--~GDII~l~~G~~iPaD~~ll~~~~g~ 169 (992)
-.+++++...+..+.+. ...++-+.+.++..-.. .+ ..+--+.-. -|....+...|.+|-|.++++. +..
T Consensus 124 ~a~~I~~iv~i~~~i~~~qe~ra~~~~~~L~~l~~-----~~-a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~-Gd~ 196 (902)
T PRK10517 124 AAGVIALMVAISTLLNFIQEARSTKAADALKAMVS-----NT-ATVLRVINDKGENGWLEIPIDQLVPGDIIKLAA-GDM 196 (902)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC-----Ce-EEEEECCccCCCCeEEEEEHHhCCCCCEEEECC-CCE
Confidence 33444444555555554 45555556666654321 11 222211001 1668899999999999999961 334
Q ss_pred eEEecccccCCCcccc
Q 001949 170 LRVDQAILTGESCSVE 185 (992)
Q Consensus 170 ~~Vdes~LtGEs~pv~ 185 (992)
+-+|=-.+.|+..-+.
T Consensus 197 IPaDg~li~g~~l~VD 212 (902)
T PRK10517 197 IPADLRILQARDLFVA 212 (902)
T ss_pred EeeeEEEEEcCceEEE
Confidence 5567666777654333
No 243
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=33.70 E-value=1.1e+02 Score=26.06 Aligned_cols=48 Identities=17% Similarity=0.086 Sum_probs=39.2
Q ss_pred EecccCCCcHHHHHHHHHHHhCCcEEEE-EcCCCHHHHHHHHHHhCCCC
Q 001949 586 LVGMLDPPREEVKNAMLSCMTAGIRVIV-VTGDNKSTAESICHKIGAFD 633 (992)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l~~~gi~v~~-~TGd~~~~a~~ia~~~gi~~ 633 (992)
++.+.+...+.+.+..+.|+++|+++.+ ..+++.......|.+.|+..
T Consensus 6 ii~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~~~ 54 (91)
T cd00860 6 VIPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKIPY 54 (91)
T ss_pred EEeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCCCE
Confidence 3445567888999999999999999988 57778888888899999763
No 244
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=32.85 E-value=1.9e+02 Score=29.63 Aligned_cols=108 Identities=13% Similarity=0.124 Sum_probs=71.5
Q ss_pred EEecccCCCcHH--HHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcc
Q 001949 585 GLVGMLDPPREE--VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (992)
Q Consensus 585 G~i~~~d~~~~~--~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (992)
|-+-++| ++|+ .++.+-.|+..+ -|+.|.-...-|..+-+++||.+... .++.-+..+.. +
T Consensus 92 ~~LPlq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFe----gii~~e~~np~----------~ 154 (244)
T KOG3109|consen 92 GRLPLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFE----GIICFETLNPI----------E 154 (244)
T ss_pred ccCcHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhcc----ceeEeeccCCC----------C
Confidence 3344455 4444 456676776654 89999999999999999999987431 11111111111 1
Q ss_pred eeEEeecChhhHHHHHHHHhhc-CCEEEEEcCCcCCHHHHhhCCeeEE
Q 001949 663 MALFTRVEPSHKRMLVEALQNQ-NEVVAMTGDGVNDAPALKKADIGIA 709 (992)
Q Consensus 663 ~~v~~r~~p~~K~~iv~~l~~~-~~~v~~iGDg~ND~~~l~~A~vgIa 709 (992)
..++|.-+|+-=....+...-. .+.+.++-|+.+.+..-++.|..=.
T Consensus 155 ~~~vcKP~~~afE~a~k~agi~~p~~t~FfDDS~~NI~~ak~vGl~tv 202 (244)
T KOG3109|consen 155 KTVVCKPSEEAFEKAMKVAGIDSPRNTYFFDDSERNIQTAKEVGLKTV 202 (244)
T ss_pred CceeecCCHHHHHHHHHHhCCCCcCceEEEcCchhhHHHHHhccceeE
Confidence 2377777776555666665554 7789999999999988777766544
No 245
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=32.84 E-value=5.2e+02 Score=32.45 Aligned_cols=163 Identities=12% Similarity=0.183 Sum_probs=80.7
Q ss_pred CCcEEEecCCCccCCceeeeeecCCceEEecccccCCCcccccccccccccccccCCCCcee-eecceEeeceEEEEEEE
Q 001949 144 PGDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELDSIIATNAVYQDKTNIL-FSGTVVVAGRARAVVVG 222 (992)
Q Consensus 144 ~GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs~pv~K~~~~~~~~~~~~~~~~n~l-~~Gt~v~~g~~~~~V~~ 222 (992)
-|....+...|.+|-|.++++ .+..+-+|=-.+.|+..-+.-.. ...+...+- ..|..+..|+...-=..
T Consensus 99 dg~~~~I~~~~Lv~GDiV~l~-~Gd~IPaDg~vi~g~~~~VDeS~--------LTGES~PV~K~~~~~v~aGT~v~~G~~ 169 (755)
T TIGR01647 99 DGKWQEIPASELVPGDVVRLK-IGDIVPADCRLFEGDYIQVDQAA--------LTGESLPVTKKTGDIAYSGSTVKQGEA 169 (755)
T ss_pred CCEEEEEEhhhCcCCCEEEEC-CCCEEeceEEEEecCceEEEccc--------ccCCccceEeccCCeeeccCEEEccEE
Confidence 477889999999999999996 13344566656666543332211 011112222 35778888875433223
Q ss_pred ecccccchh--HHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHH
Q 001949 223 VGANTAMGS--IRDSMLQTEDEVTPLKKKLDEFGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAV 300 (992)
Q Consensus 223 tG~~T~~g~--i~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~ 300 (992)
.+.-+..|. ....+.+.-.+..+-...+++....+....+.+.+++.++.+..+ .......+..++...+
T Consensus 170 ~~~V~~tG~~T~~g~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~--------~~~~~~~~~~~~~~~i 241 (755)
T TIGR01647 170 EAVVTATGMNTFFGKAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVL--------FFGRGESFREGLQFAL 241 (755)
T ss_pred EEEEEEcCCccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHcCCCHHHHHHHHH
Confidence 333333332 222222211222212224555665555544444433333221110 0000122344555566
Q ss_pred HhcCCchHHHHHHHHHHhhhhhh
Q 001949 301 AAIPEGLPAVVTTCLALGTKRMA 323 (992)
Q Consensus 301 ~~iP~~L~~~~~~~~~~~~~~l~ 323 (992)
..+-.+.|.+++++...+...-.
T Consensus 242 ~vlv~a~P~~Lp~~~~~~la~g~ 264 (755)
T TIGR01647 242 VLLVGGIPIAMPAVLSVTMAVGA 264 (755)
T ss_pred HHHHHhCCcchHHHHHHHHHHHH
Confidence 66677778888888877765543
No 246
>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=32.38 E-value=6.3e+02 Score=27.29 Aligned_cols=166 Identities=15% Similarity=0.186 Sum_probs=83.2
Q ss_pred cCCHHHHHHHHHHHHHHhhcc-chhhhhhhcccCCcccccCccccCCCcEEEEEecccCCCcHHH--HHHHHHHHhCCcE
Q 001949 534 PMTANIRAELESRLNSLAGKE-ALRCLALALKQMPINRQTLSYDDEKDLTFIGLVGMLDPPREEV--KNAMLSCMTAGIR 610 (992)
Q Consensus 534 ~~~~~~~~~~~~~~~~~~~~~-g~r~l~~a~~~l~~~~~~~~~~~e~~l~~lG~i~~~d~~~~~~--~~~i~~l~~~gi~ 610 (992)
++.++.++++.+.++++.. + |.+. -+..+...|.+...+ ...++.+++.||.
T Consensus 9 ~iA~~i~~~lk~~v~~l~~-~~g~~P------------------------~LaiI~vg~d~as~~Yv~~k~k~a~~~Gi~ 63 (288)
T PRK14171 9 ALANEILADLKLEIQELKS-QTNASP------------------------KLAIVLVGDNPASIIYVKNKIKNAHKIGID 63 (288)
T ss_pred HHHHHHHHHHHHHHHHHHh-ccCCCC------------------------eEEEEEeCCCccHHHHHHHHHHHHHHcCCE
Confidence 3445667777777777754 3 3221 144444445544433 3468888999998
Q ss_pred EEEEc--CC-CHHHHHHHHHHhCCCCCccccccccccc------------------hhhhcCCHHHHHHHhcce-eEEee
Q 001949 611 VIVVT--GD-NKSTAESICHKIGAFDHLVDFVGRSYTA------------------SEFEELPAMQQTVALQHM-ALFTR 668 (992)
Q Consensus 611 v~~~T--Gd-~~~~a~~ia~~~gi~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~-~v~~r 668 (992)
+.+.- .+ +.+.....-++++-+. .++|..+.- .+.+.++......+.... .-|.-
T Consensus 64 ~~~~~l~~~~~~~~l~~~I~~LN~D~---~V~GIlvqlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~g~~~~~~P 140 (288)
T PRK14171 64 TLLVNLSTTIHTNDLISKINELNLDN---EISGIIVQLPLPSSIDKNKILSAVSPSKDIDGFHPLNVGYLHSGISQGFIP 140 (288)
T ss_pred EEEEECCCCCCHHHHHHHHHHHcCCC---CCCEEEEeCCCCCCCCHHHHHhccCcccccccCCccchhhhhcCCCCCCcC
Confidence 76542 33 2334445555554332 222222111 112222222222222211 23556
Q ss_pred cChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc-H--HHHhccCeeecC
Q 001949 669 VEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT-A--VAKSASDMVLAD 727 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~-~--~~~~~ad~vl~~ 727 (992)
|||.-=.++++..+- .|+.|+++|-|.. =+.||...|.-|.+- +.+ + .....||+++..
T Consensus 141 cTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~~~~~~ADIvV~A 209 (288)
T PRK14171 141 CTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLSSITSKADIVVAA 209 (288)
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEc
Confidence 788765555555543 3889999998743 133455555555442 222 2 234567888753
No 247
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=32.19 E-value=1.2e+03 Score=29.99 Aligned_cols=77 Identities=14% Similarity=0.193 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCceEEe
Q 001949 94 LLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQLRVD 173 (992)
Q Consensus 94 i~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~~~Vd 173 (992)
++++++..+...+..+...++-+.+.++..... ....| +.-|....+...|.+|-|.++++ .+..+-+|
T Consensus 40 ~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~------~~~~V----iRdg~~~~I~~~~Lv~GDiv~l~-~Gd~IPaD 108 (917)
T TIGR01116 40 FVILLILVANAIVGVWQERNAEKAIEALKEYES------EHAKV----LRDGRWSVIKAKDLVPGDIVELA-VGDKVPAD 108 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC------CceEE----EECCEEEEEEHHHCCCCCEEEEC-CCCEeecc
Confidence 344444444444555566666666776654221 11222 22388899999999999999996 13344556
Q ss_pred cccccCCC
Q 001949 174 QAILTGES 181 (992)
Q Consensus 174 es~LtGEs 181 (992)
=-.+.|+.
T Consensus 109 ~~ll~~~~ 116 (917)
T TIGR01116 109 IRVLSLKT 116 (917)
T ss_pred EEEEEecc
Confidence 55666654
No 248
>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=31.55 E-value=1.3e+02 Score=32.62 Aligned_cols=62 Identities=11% Similarity=0.177 Sum_probs=35.2
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC---C-HHHHhh------CCeeEEecCCc--HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN---D-APALKK------ADIGIAMGSGT--AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N---D-~~~l~~------A~vgIa~g~~~--~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|-|.. - +.||.. |.|-++=.... ......||+++..
T Consensus 136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~~~~~~ADIvIsA 211 (293)
T PRK14185 136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLKKECLEADIIIAA 211 (293)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHHHHHhhCCEEEEc
Confidence 455777666666666543 3899999998843 1 334443 33444422111 2233567888753
No 249
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=31.05 E-value=95 Score=28.37 Aligned_cols=39 Identities=18% Similarity=0.289 Sum_probs=29.7
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCC
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGA 631 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi 631 (992)
.--.+++.++++.+++.|++++.+|++.. ....+.+.|.
T Consensus 53 SG~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 53 SGNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 33567899999999999999999998874 3335555553
No 250
>COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) [Translation, ribosomal structure and biogenesis]
Probab=30.36 E-value=51 Score=28.99 Aligned_cols=28 Identities=36% Similarity=0.496 Sum_probs=23.2
Q ss_pred EEEECCEEEEeeCCCCCCCcEEEecCCCc
Q 001949 127 TVLRNGCFSILPAAELVPGDIVEVNVGCK 155 (992)
Q Consensus 127 ~V~R~g~~~~i~~~~Lv~GDII~l~~G~~ 155 (992)
+|.-||+.. -++.++++||+|.|.-|..
T Consensus 35 rV~vNG~~a-KpS~~VK~GD~l~i~~~~~ 62 (100)
T COG1188 35 RVKVNGQRA-KPSKEVKVGDILTIRFGNK 62 (100)
T ss_pred eEEECCEEc-ccccccCCCCEEEEEeCCc
Confidence 566678776 7999999999999998864
No 251
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=30.21 E-value=68 Score=37.04 Aligned_cols=106 Identities=14% Similarity=0.114 Sum_probs=56.5
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCC------Cccccccccccchh----------hhcCC-----
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFD------HLVDFVGRSYTASE----------FEELP----- 652 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~------~~~~~~~~~~~~~~----------~~~~~----- 652 (992)
.|+.+..++++|++|.++.++|+-+..-+..+.+-+ +.. .+.+..+.++.+.. +..+.
T Consensus 185 ~~~l~~~L~~lr~~GKklFLiTNS~~~yt~~~M~yl-~g~~~~~~~dW~dlFDvVIv~A~KP~FF~~~~pfr~vd~~~g~ 263 (448)
T PF05761_consen 185 DPKLPPWLERLRSAGKKLFLITNSPFDYTNAVMSYL-LGPFLGEDPDWRDLFDVVIVDARKPGFFTEGRPFREVDTETGK 263 (448)
T ss_dssp -CHHHHHHHHHHCCT-EEEEE-SS-HHHHHHHHHHH-CGCCSSTTT-GGGCECEEEES--CCHHHCT---EEEEETTTSS
T ss_pred CchHHHHHHHHHhcCceEEEecCCCCchhhhhhhhc-cCCCCCCCCChhhheeEEEEcCCCCcccCCCCceEEEECCCCc
Confidence 357899999999999999999999999988887776 333 34333333332210 00000
Q ss_pred --HHHHHHHhcceeEEeecChhhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhh
Q 001949 653 --AMQQTVALQHMALFTRVEPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKK 703 (992)
Q Consensus 653 --~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~ 703 (992)
.......+.+..||+.-+-. .+.+.+...|..|+.+||.. .|+..-+.
T Consensus 264 l~~~~~~~~l~~g~vY~gGn~~---~l~~ll~~~g~~VLY~GDhi~~Di~~~k~ 314 (448)
T PF05761_consen 264 LKWGKYVGPLEKGKVYSGGNWD---QLHKLLGWRGKEVLYFGDHIYGDILKSKK 314 (448)
T ss_dssp EECS---SS--TC-EEEE--HH---HHHHHCT--GGGEEEEESSTTTTHHHHHH
T ss_pred cccccccccccCCCEeecCCHH---HHHHHHccCCCeEEEECCchhhhhhhhcc
Confidence 00000112233455554433 33444556689999999984 68765544
No 252
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=30.04 E-value=1.1e+02 Score=31.09 Aligned_cols=12 Identities=8% Similarity=0.050 Sum_probs=6.5
Q ss_pred HHHHHHHHHhhc
Q 001949 958 IDEVLKFFSRKS 969 (992)
Q Consensus 958 ~~ei~K~~~r~~ 969 (992)
+..++.|++.+|
T Consensus 217 ~i~l~~~~~~~~ 228 (230)
T PF03904_consen 217 FIYLYEWIRAKF 228 (230)
T ss_pred HHHHHHHHHHHh
Confidence 344666665544
No 253
>PF12368 DUF3650: Protein of unknown function (DUF3650) ; InterPro: IPR022111 This domain family is found in bacteria, and is approximately 30 amino acids in length. The family is found in association with PF00581 from PFAM. There is a single completely conserved residue N that may be functionally important.
Probab=29.59 E-value=45 Score=21.81 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.8
Q ss_pred CCCCCHHHHHHHHhh
Q 001949 21 TKGLTDSQVARHVRI 35 (992)
Q Consensus 21 ~~GL~~~~~~~r~~~ 35 (992)
+.|||.+|+++|++.
T Consensus 13 eh~ls~ee~~~RL~~ 27 (28)
T PF12368_consen 13 EHGLSEEEVAERLAA 27 (28)
T ss_pred hcCCCHHHHHHHHHc
Confidence 469999999999874
No 254
>PF01455 HupF_HypC: HupF/HypC family; InterPro: IPR001109 The large subunit of [NiFe]-hydrogenase, as well as other nickel metalloenzymes, is synthesised as a precursor devoid of the metalloenzyme active site. This precursor then undergoes a complex post-translational maturation process that requires a number of accessory proteins. The hydrogenase expression/formation proteins (HupF/HypC) form a family of small proteins that are hydrogenase precursor-specific chaperones required for this maturation process []. They are believed to keep the hydrogenase precursor in a conformation accessible for metal incorporation [, ].; PDB: 3D3R_A 2Z1C_C 2OT2_A.
Probab=29.27 E-value=1.1e+02 Score=24.91 Aligned_cols=32 Identities=28% Similarity=0.300 Sum_probs=23.8
Q ss_pred CCceEEEECCEEEEeeCC---CCCCCcEEEecCCC
Q 001949 123 ADIATVLRNGCFSILPAA---ELVPGDIVEVNVGC 154 (992)
Q Consensus 123 ~~~~~V~R~g~~~~i~~~---~Lv~GDII~l~~G~ 154 (992)
...++|-.+|..++++.. ++.|||.|++..|.
T Consensus 16 ~~~A~v~~~G~~~~V~~~lv~~v~~Gd~VLVHaG~ 50 (68)
T PF01455_consen 16 GGMAVVDFGGVRREVSLALVPDVKVGDYVLVHAGF 50 (68)
T ss_dssp TTEEEEEETTEEEEEEGTTCTSB-TT-EEEEETTE
T ss_pred CCEEEEEcCCcEEEEEEEEeCCCCCCCEEEEecCh
Confidence 346778889999988654 57899999999884
No 255
>PF15584 Imm44: Immunity protein 44
Probab=29.27 E-value=26 Score=29.95 Aligned_cols=19 Identities=26% Similarity=0.338 Sum_probs=15.3
Q ss_pred CCcEEEecCCCccCCceee
Q 001949 144 PGDIVEVNVGCKIPADMRM 162 (992)
Q Consensus 144 ~GDII~l~~G~~iPaD~~l 162 (992)
+.+-..|+.|++|||||+-
T Consensus 13 ~~~~~~I~SG~~iP~~GIw 31 (94)
T PF15584_consen 13 PSEGGVIKSGQEIPCDGIW 31 (94)
T ss_pred CCCCCEEecCCCcccCCeE
Confidence 3455678899999999975
No 256
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=29.08 E-value=1.4e+02 Score=32.02 Aligned_cols=62 Identities=10% Similarity=0.124 Sum_probs=35.8
Q ss_pred EeecChhhHHHHHHHHhhc--CCEEEEEcCCcC----CHHHHhhCCeeEEe--cCCcH--HHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQNQ--NEVVAMTGDGVN----DAPALKKADIGIAM--GSGTA--VAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~~--~~~v~~iGDg~N----D~~~l~~A~vgIa~--g~~~~--~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+-. |+.|+++|-|.. =+-||...+.-|.+ ....+ .....||+++..
T Consensus 137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~~~k~ADIvIsA 208 (282)
T PRK14180 137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVA 208 (282)
T ss_pred cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHHHhhhcCEEEEc
Confidence 4557787666666666433 889999998743 13345444444443 21122 234567887653
No 257
>PLN02591 tryptophan synthase
Probab=28.76 E-value=3.9e+02 Score=28.25 Aligned_cols=99 Identities=19% Similarity=0.265 Sum_probs=54.6
Q ss_pred CCCcHHHHHHHHHHHhCCcEEE-EEcCCC-HHHHHHHHHHh-CCCCCccccccccccchhhhcCCHHHHHHHhcceeEEe
Q 001949 591 DPPREEVKNAMLSCMTAGIRVI-VVTGDN-KSTAESICHKI-GAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFT 667 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~-~~TGd~-~~~a~~ia~~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 667 (992)
|=+-++..+..+.+++.|+..+ ++|-.. .+..+.+++.. |... . +...-++|..
T Consensus 114 DLP~ee~~~~~~~~~~~gl~~I~lv~Ptt~~~ri~~ia~~~~gFIY-~--Vs~~GvTG~~-------------------- 170 (250)
T PLN02591 114 DLPLEETEALRAEAAKNGIELVLLTTPTTPTERMKAIAEASEGFVY-L--VSSTGVTGAR-------------------- 170 (250)
T ss_pred CCCHHHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHhCCCcEE-E--eeCCCCcCCC--------------------
Confidence 4444777788888888888744 444554 34566666654 2211 0 0001112210
Q ss_pred ecChhhHHHHHHHHhhcCCEEEEEcCCcC---CHHHHhhC-CeeEEecC
Q 001949 668 RVEPSHKRMLVEALQNQNEVVAMTGDGVN---DAPALKKA-DIGIAMGS 712 (992)
Q Consensus 668 r~~p~~K~~iv~~l~~~~~~v~~iGDg~N---D~~~l~~A-~vgIa~g~ 712 (992)
...|.+-.+.++.+++....-+++|=|.+ |+..+... -=|+-+|+
T Consensus 171 ~~~~~~~~~~i~~vk~~~~~Pv~vGFGI~~~e~v~~~~~~GADGvIVGS 219 (250)
T PLN02591 171 ASVSGRVESLLQELKEVTDKPVAVGFGISKPEHAKQIAGWGADGVIVGS 219 (250)
T ss_pred cCCchhHHHHHHHHHhcCCCceEEeCCCCCHHHHHHHHhcCCCEEEECH
Confidence 01245556778888877667788899998 45554443 23455543
No 258
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones]
Probab=28.63 E-value=3.2e+02 Score=30.01 Aligned_cols=85 Identities=19% Similarity=0.330 Sum_probs=64.6
Q ss_pred EecccCCCcHHHHHHHHHH-HhCCcEEEEEcCCC--HHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcc
Q 001949 586 LVGMLDPPREEVKNAMLSC-MTAGIRVIVVTGDN--KSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQH 662 (992)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l-~~~gi~v~~~TGd~--~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 662 (992)
.++++|+-|-+...++.++ +++|+.+.+--..- .+..+.+++.+|++.... ..+
T Consensus 219 vtAMhDaTrGGla~aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl~~-----------------------anE 275 (339)
T COG0309 219 VTAMHDATRGGLAGALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPLEL-----------------------ANE 275 (339)
T ss_pred hhhccCCchhHHHHHHHHHHHHcCCeEEEeeccccccHHHHHHHHHhCCCHHHh-----------------------hcC
Confidence 6789999999999999887 56677777665544 467889999999986432 223
Q ss_pred eeEEeecChhhHHHHHHHHhhcC-CEEEEEcC
Q 001949 663 MALFTRVEPSHKRMLVEALQNQN-EVVAMTGD 693 (992)
Q Consensus 663 ~~v~~r~~p~~K~~iv~~l~~~~-~~v~~iGD 693 (992)
-.+.+-+.|++-.++++.|++.+ .....+|-
T Consensus 276 G~lv~~V~~~~a~~~l~~L~~~~~~~A~iIGe 307 (339)
T COG0309 276 GKLVIAVPPEHAEEVLEALRSHGLKDAAIIGE 307 (339)
T ss_pred ceEEEEECHHHHHHHHHHHHhcCCccceeEEE
Confidence 33666688888889999999998 56666664
No 259
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=27.77 E-value=76 Score=33.98 Aligned_cols=48 Identities=21% Similarity=0.287 Sum_probs=40.4
Q ss_pred EEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHH---hCCC
Q 001949 585 GLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHK---IGAF 632 (992)
Q Consensus 585 G~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~---~gi~ 632 (992)
|++-..+.+-|++.++++.|++.|-++..+|..+-.+-+..+++ +|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 66677899999999999999999999999999998877777654 5554
No 260
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=27.21 E-value=6.2e+02 Score=25.93 Aligned_cols=205 Identities=15% Similarity=0.163 Sum_probs=87.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCCccCCceeeeeecCCc-eEEecc
Q 001949 97 LAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGCKIPADMRMIEMLSNQ-LRVDQA 175 (992)
Q Consensus 97 i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~~iPaD~~ll~~~~g~-~~Vdes 175 (992)
+++..+-.........+..+.+++++..... +...+.- -|....+...|.+|-|.+.+. .|+ +-+|=-
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~r----~~~~~~i~~~~L~~GDiI~l~--~g~~vPaD~~ 71 (230)
T PF00122_consen 3 LFLILLSNIIEIWQEYRSKKQLKKLNNLNPQ-----KKVTVIR----DGRWQKIPSSELVPGDIIILK--AGDIVPADGI 71 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSS-----EEEEEEE----TTEEEEEEGGGT-TTSEEEEE--TTEBESSEEE
T ss_pred EEEhHHHHHHHHHHHHHHHHHHHHHhccCCC-----ccEEEEe----ccccccchHhhccceeeeecc--cccccccCcc
Confidence 3343444444455556666667766554322 2122222 268888888899999998885 333 223333
Q ss_pred ccc-CCCcccccccccccccccccCCCCceeeecceEeeceEEE--EEEEecccccchhHHHHhccCCCCCCchHHHHHH
Q 001949 176 ILT-GESCSVEKELDSIIATNAVYQDKTNILFSGTVVVAGRARA--VVVGVGANTAMGSIRDSMLQTEDEVTPLKKKLDE 252 (992)
Q Consensus 176 ~Lt-GEs~pv~K~~~~~~~~~~~~~~~~n~l~~Gt~v~~g~~~~--~V~~tG~~T~~g~i~~~~~~~~~~~~~l~~~~~~ 252 (992)
.+. |... +.- .....+..+..........|..+..|+... -+...-..|........+.+...+..+....+++
T Consensus 72 ll~~g~~~-vd~--s~ltGes~pv~k~~~~~~~~~~i~~Gs~v~~g~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~ 148 (230)
T PF00122_consen 72 LLESGSAY-VDE--SALTGESEPVKKTPLPLNPGNIIFAGSIVVSGWGIGVVIATGSDTKLGRILQLVSKSESKKSPLER 148 (230)
T ss_dssp EEESSEEE-EEC--HHHHSBSSEEEESSSCCCTTTEE-TTEEEEEEEEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHH
T ss_pred ceeccccc-ccc--ccccccccccccccccccccchhhccccccccccccccceeeecccccccccccccccccchhhhh
Confidence 333 2111 100 000000000000000223677888776433 2333333333332222222322232333345666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCccchHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHhhhhh
Q 001949 253 FGTFLAKVIAGICVLVWIVNIGHFRDPSHGGFLRGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRM 322 (992)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~iP~~L~~~~~~~~~~~~~~l 322 (992)
....+......+.++..++....+ +.......+...+...+..+=...|.+++++...+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~l~~~~P~~l~~~~~~~~~~~ 211 (230)
T PF00122_consen 149 KLNKIAKILIIIILAIAILVFIIW-------FFNDSGISFFKSFLFAISLLIVLIPCALPLALPLSLAIA 211 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC-------HTGSTTCHCCHHHHHHHHHHHHHS-TTHHHHHHHHHHHH
T ss_pred hhHHHHHHHHhcccccchhhhccc-------eecccccccccccccccceeeeecccceeehHHHHHHHH
Confidence 666666555544444443322111 000011222334444455555566666666666655443
No 261
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.98 E-value=3.2e+02 Score=29.48 Aligned_cols=141 Identities=12% Similarity=0.101 Sum_probs=71.6
Q ss_pred EEEecccCCCcHH--HHHHHHHHHhCCcEEEEE--cCC-CHHHHHHHHHHhCCCCCcccccccccc--------------
Q 001949 584 IGLVGMLDPPREE--VKNAMLSCMTAGIRVIVV--TGD-NKSTAESICHKIGAFDHLVDFVGRSYT-------------- 644 (992)
Q Consensus 584 lG~i~~~d~~~~~--~~~~i~~l~~~gi~v~~~--TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~-------------- 644 (992)
++.+...|.+... +....+.+++.|+.+.+. ..+ +.+.....-++++-+. .++|..+.
T Consensus 36 Laii~vg~d~as~~Yv~~k~k~a~~~Gi~~~~~~l~~~~s~~el~~~I~~lN~d~---~V~GIlvqlPLP~~~~~~~i~~ 112 (285)
T PRK10792 36 LAVVLVGSDPASQVYVASKRKACEEVGFVSRSYDLPETTSEAELLALIDELNADP---TIDGILVQLPLPAHIDNVKVLE 112 (285)
T ss_pred EEEEEeCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC---CCCEEEEeCCCCCCCCHHHHHh
Confidence 4444455554333 344577888889885544 322 3344444555555332 11222111
Q ss_pred ----chhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCCcC---C-HHHHhhCCeeEEec-CC
Q 001949 645 ----ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN---D-APALKKADIGIAMG-SG 713 (992)
Q Consensus 645 ----~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N---D-~~~l~~A~vgIa~g-~~ 713 (992)
..+.+.++......+.....-|.-|||.-=.++++...- .|+.|+.+|.|.. - +.+|...+.-|.+- +.
T Consensus 113 ~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~ 192 (285)
T PRK10792 113 RIHPDKDVDGFHPYNVGRLAQRIPLLRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRF 192 (285)
T ss_pred ccCcccccCccChhhHhHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECC
Confidence 112222322222222222223556788766666666653 3899999999853 1 33455555555442 22
Q ss_pred c---HHHHhccCeeecC
Q 001949 714 T---AVAKSASDMVLAD 727 (992)
Q Consensus 714 ~---~~~~~~ad~vl~~ 727 (992)
+ ......||+++..
T Consensus 193 T~~l~~~~~~ADIvi~a 209 (285)
T PRK10792 193 TKNLRHHVRNADLLVVA 209 (285)
T ss_pred CCCHHHHHhhCCEEEEc
Confidence 2 2234578998864
No 262
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=26.27 E-value=1.6e+03 Score=29.35 Aligned_cols=36 Identities=14% Similarity=0.333 Sum_probs=21.8
Q ss_pred CcEEEecCCCccCCceeeeeecCCceEEecccccCCC
Q 001949 145 GDIVEVNVGCKIPADMRMIEMLSNQLRVDQAILTGES 181 (992)
Q Consensus 145 GDII~l~~G~~iPaD~~ll~~~~g~~~Vdes~LtGEs 181 (992)
|-...+...|.+|-|.++++ .+..+-+|=-.+.|+.
T Consensus 149 g~~~~I~~~~lv~GDiv~l~-~Gd~IPaD~~il~~~~ 184 (997)
T TIGR01106 149 GEKMSINAEQVVVGDLVEVK-GGDRIPADLRIISAQG 184 (997)
T ss_pred CEEEEeeHHHCCCCCEEEEC-CCCEEeeeEEEEEccC
Confidence 56667777777777777775 1233445555555554
No 263
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=25.70 E-value=8e+02 Score=25.78 Aligned_cols=50 Identities=12% Similarity=0.118 Sum_probs=39.8
Q ss_pred CCcEEEEEecccCCCcHHHHHHHHHHHhC---CcEEEEEcCCCHHHHHHHHHH
Q 001949 579 KDLTFIGLVGMLDPPREEVKNAMLSCMTA---GIRVIVVTGDNKSTAESICHK 628 (992)
Q Consensus 579 ~~l~~lG~i~~~d~~~~~~~~~i~~l~~~---gi~v~~~TGd~~~~a~~ia~~ 628 (992)
.|++=+=+++=.+-+.|+..++++.+++. |..++-.+.|++..|++++.-
T Consensus 91 ~~~iKlEVi~d~~~Llpd~~~tv~aa~~L~~~Gf~vlpyc~dd~~~ar~l~~~ 143 (248)
T cd04728 91 TDWIKLEVIGDDKTLLPDPIETLKAAEILVKEGFTVLPYCTDDPVLAKRLEDA 143 (248)
T ss_pred CCeEEEEEecCccccccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHc
Confidence 34455555555667899999999999998 999997888888888888764
No 264
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=25.57 E-value=34 Score=34.14 Aligned_cols=13 Identities=38% Similarity=0.363 Sum_probs=12.0
Q ss_pred EEecCCCccccCc
Q 001949 344 ICSDKTGTLTTNM 356 (992)
Q Consensus 344 i~~DKTGTLT~n~ 356 (992)
+|||.+||||.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999987
No 265
>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=24.69 E-value=3.9e+02 Score=28.89 Aligned_cols=62 Identities=16% Similarity=0.204 Sum_probs=35.2
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-CCc---HHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-SGT---AVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~~~---~~~~~~ad~vl~~ 727 (992)
|.-|||.-=.++++..+- .|+.|+++|-+.. =+.||...+--|.+- +.+ ......||+++..
T Consensus 134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~~~~~~ADIvIsA 205 (287)
T PRK14173 134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLPAVTRRADVLVVA 205 (287)
T ss_pred CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEEe
Confidence 455777666666665543 3889999998743 133455444444432 222 1234567888753
No 266
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=24.59 E-value=1.6e+02 Score=25.26 Aligned_cols=49 Identities=16% Similarity=0.059 Sum_probs=39.4
Q ss_pred EEecccC---CCcHHHHHHHHHHHhCCcEEEEE-cCCCHHHHHHHHHHhCCCC
Q 001949 585 GLVGMLD---PPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAFD 633 (992)
Q Consensus 585 G~i~~~d---~~~~~~~~~i~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~~ 633 (992)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+..
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~p~ 55 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGIPF 55 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTESE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCCeE
Confidence 4556666 67788889999999999998887 6667777888899888764
No 267
>PLN02645 phosphoglycolate phosphatase
Probab=24.12 E-value=1.5e+02 Score=32.52 Aligned_cols=39 Identities=13% Similarity=0.120 Sum_probs=28.1
Q ss_pred ChhhHHHHHHHHhhcCCEEEEEcCCc-CCHHHHhhCCeeE
Q 001949 670 EPSHKRMLVEALQNQNEVVAMTGDGV-NDAPALKKADIGI 708 (992)
Q Consensus 670 ~p~~K~~iv~~l~~~~~~v~~iGDg~-ND~~~l~~A~vgI 708 (992)
+|.--..+.+.+....+.++||||.. +|+.+-+.|++--
T Consensus 232 ~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ 271 (311)
T PLN02645 232 STFMMDYLANKFGIEKSQICMVGDRLDTDILFGQNGGCKT 271 (311)
T ss_pred hHHHHHHHHHHcCCCcccEEEEcCCcHHHHHHHHHcCCCE
Confidence 33333344555555577899999997 9999999999643
No 268
>COG0190 FolD 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase [Coenzyme metabolism]
Probab=23.50 E-value=4.7e+02 Score=28.03 Aligned_cols=62 Identities=21% Similarity=0.213 Sum_probs=38.9
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC----CHHHHhhCCeeEEec-C---CcHHHHhccCeeecC
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN----DAPALKKADIGIAMG-S---GTAVAKSASDMVLAD 727 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N----D~~~l~~A~vgIa~g-~---~~~~~~~~ad~vl~~ 727 (992)
+--|||..=..+++.+.- +|+.+..+|-|.- =+.+|..++-.|.+- + .-....+.||+++..
T Consensus 135 ~~PCTp~gi~~ll~~~~i~l~Gk~~vVVGrS~iVGkPla~lL~~~naTVtvcHs~T~~l~~~~k~ADIvv~A 206 (283)
T COG0190 135 FLPCTPAGIMTLLEEYGIDLRGKNVVVVGRSNIVGKPLALLLLNANATVTVCHSRTKDLASITKNADIVVVA 206 (283)
T ss_pred CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHhCCCEEEEEcCCCCCHHHHhhhCCEEEEe
Confidence 445788777777777766 5889999998732 134566666666653 2 223334567887654
No 269
>KOG3128 consensus Uncharacterized conserved protein [Function unknown]
Probab=23.22 E-value=2.8e+02 Score=28.97 Aligned_cols=136 Identities=16% Similarity=0.138 Sum_probs=74.2
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCC--HHHHHHHhcceeEEeecC
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELP--AMQQTVALQHMALFTRVE 670 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~r~~ 670 (992)
+|++..+..+.|+..+|++.+.|..-......+-++.+...++....+.-+.-.+-..+. .+.+.. .|+|.+
T Consensus 139 lReg~~~ff~~L~~~~IP~~iFSAGigdiiEev~~q~~~~~pn~k~vSN~~~F~edg~l~gF~~~Lih------tfnkn~ 212 (298)
T KOG3128|consen 139 LREGYEEFFEALQAHEIPLLIFSAGIGDIIEEVTRQKLVLHPNVKFVSNYMDFDEDGNLCGFSQPLIH------TFNKNS 212 (298)
T ss_pred HHHHHHHHHHHHHhCCCceEEEecchHHHHHHHHHHHhccCccHHhhhhhhhhcccchhhhhhHHHHH------HHccch
Confidence 688999999999999999999998887777777776655444322111111111111111 011111 122221
Q ss_pred hhhHHHH-HHHHhh--cCCEEEEEcCCcCCHHHHhhC-C------eeEEecCCc---HHHHhccCeeecCCCchHHHHH
Q 001949 671 PSHKRML-VEALQN--QNEVVAMTGDGVNDAPALKKA-D------IGIAMGSGT---AVAKSASDMVLADDNFATIVAA 736 (992)
Q Consensus 671 p~~K~~i-v~~l~~--~~~~v~~iGDg~ND~~~l~~A-~------vgIa~g~~~---~~~~~~ad~vl~~~~~~~i~~~ 736 (992)
.. .+. -+.+.. .+..|...||+.-|+.|-.-+ + +|...+... ..-++.-|+|+.+|....++.-
T Consensus 213 ~v--~~~~s~yf~~~~~~~nVillGdsigdl~ma~gv~~~~~iLkig~l~d~vee~~~~ymd~ydIvL~~D~tldv~~s 289 (298)
T KOG3128|consen 213 SV--LQNESEYFHQLAGRVNVILLGDSIGDLHMADGVPRVGHILKIGYLNDSVEEALEKYMDSYDIVLVHDETLDVANS 289 (298)
T ss_pred HH--HHhhhHHHhhccCCceEEEeccccccchhhcCCcccccceeeecccchHHHHHHHHHhhcceEEecCcccchhHH
Confidence 11 111 122222 266899999999999874211 1 122212111 2234578999998876665543
No 270
>cd05013 SIS_RpiR RpiR-like protein. RpiR contains a SIS (Sugar ISomerase) domain, which is found in many phosphosugar isomerases and phosphosugar binding proteins. In E. coli, rpiR negatively regulates the expression of rpiB gene. Both rpiB and rpiA are ribose phosphate isomerases that catalyze the reversible reactions of ribose 5-phosphate into ribulose 5-phosphate.
Probab=23.05 E-value=2.9e+02 Score=25.37 Aligned_cols=108 Identities=17% Similarity=0.123 Sum_probs=58.9
Q ss_pred HHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHH-hcceeEEeec--Chh
Q 001949 596 EVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA-LQHMALFTRV--EPS 672 (992)
Q Consensus 596 ~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~r~--~p~ 672 (992)
+..++++.+++++.-.+.-+|.....|...+..+....... ..+.+.+... ...... .....++.-. .+.
T Consensus 2 ~i~~~~~~i~~~~~i~i~g~g~s~~~a~~~~~~l~~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~i~iS~~g~~~ 74 (139)
T cd05013 2 ALEKAVDLLAKARRIYIFGVGSSGLVAEYLAYKLLRLGKPV----VLLSDPHLQL---MSAANLTPGDVVIAISFSGETK 74 (139)
T ss_pred HHHHHHHHHHhCCEEEEEEcCchHHHHHHHHHHHHHcCCce----EEecCHHHHH---HHHHcCCCCCEEEEEeCCCCCH
Confidence 35677888888887777778888888888877765432211 1111111000 000000 1122333322 234
Q ss_pred hHHHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 673 HKRMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 673 ~K~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
+-.++++.++++|-.++.+.+. .+.++-+.+|.-+-..
T Consensus 75 ~~~~~~~~a~~~g~~iv~iT~~-~~~~l~~~~d~~i~~~ 112 (139)
T cd05013 75 ETVEAAEIAKERGAKVIAITDS-ANSPLAKLADIVLLVS 112 (139)
T ss_pred HHHHHHHHHHHcCCeEEEEcCC-CCChhHHhcCEEEEcC
Confidence 5567788888887777666553 2345556777777654
No 271
>PRK14168 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=22.82 E-value=2.1e+02 Score=30.98 Aligned_cols=61 Identities=15% Similarity=0.177 Sum_probs=34.1
Q ss_pred EeecChhhHHHHHHHHhh--cCCEEEEEcCCcC---C-HHHHhh------CCeeEEecCCc--HHHHhccCeeec
Q 001949 666 FTRVEPSHKRMLVEALQN--QNEVVAMTGDGVN---D-APALKK------ADIGIAMGSGT--AVAKSASDMVLA 726 (992)
Q Consensus 666 ~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~N---D-~~~l~~------A~vgIa~g~~~--~~~~~~ad~vl~ 726 (992)
|.-|||.-=.++++...- .|+.|+++|.|.. - +.||.. |-|.++=.... ......||+++.
T Consensus 140 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~atVtv~hs~T~~l~~~~~~ADIvVs 214 (297)
T PRK14168 140 FLPCTPAGIQEMLVRSGVETSGAEVVVVGRSNIVGKPIANMMTQKGPGANATVTIVHTRSKNLARHCQRADILIV 214 (297)
T ss_pred CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcccHHHHHHHHhcccCCCCEEEEecCCCcCHHHHHhhCCEEEE
Confidence 455777666666665543 3899999999843 1 224433 34444422211 223456788775
No 272
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=22.81 E-value=1.6e+02 Score=31.09 Aligned_cols=106 Identities=16% Similarity=0.198 Sum_probs=60.3
Q ss_pred CcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH---HHhCCCCCcccccc-ccccchhhhcCCHHHHHHHhcceeEEee
Q 001949 593 PREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC---HKIGAFDHLVDFVG-RSYTASEFEELPAMQQTVALQHMALFTR 668 (992)
Q Consensus 593 ~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia---~~~gi~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~r 668 (992)
+-+++++.|+.+++.|+.|.-+|.+.+....... +++||......... ..+...... ......-...+-.+|+
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~~~~~~~~~~~~~~--~~~~~~~~~~~GIlft- 158 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSSFPEDGIISFPVFD--SALSRAPSFYDGILFT- 158 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccccccCcceeccccc--CCCCCCceeecCeEEe-
Confidence 4578999999999999999999999977655444 34676643321000 000000000 0000001111223443
Q ss_pred cChhhHHHHHHHHhh----cCCEEEEEcCCcCCHHHHh
Q 001949 669 VEPSHKRMLVEALQN----QNEVVAMTGDGVNDAPALK 702 (992)
Q Consensus 669 ~~p~~K~~iv~~l~~----~~~~v~~iGDg~ND~~~l~ 702 (992)
+..+|..++..+-. ..+.|.+|-|....+..+.
T Consensus 159 -~~~~KG~~L~~fL~~~~~~pk~IIfIDD~~~nl~sv~ 195 (252)
T PF11019_consen 159 -GGQDKGEVLKYFLDKINQSPKKIIFIDDNKENLKSVE 195 (252)
T ss_pred -CCCccHHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHH
Confidence 34567776655543 4678999999987776554
No 273
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=22.73 E-value=3.7e+02 Score=28.73 Aligned_cols=109 Identities=8% Similarity=0.011 Sum_probs=65.9
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHH-hcceeEEeecChhh
Q 001949 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVA-LQHMALFTRVEPSH 673 (992)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~r~~p~~ 673 (992)
+...++++.+++++.-.++-.|.+...|..++.++........ .. .+..... ...... -.++.++...++..
T Consensus 116 ~~l~~~~~~i~~a~~I~i~G~G~s~~~A~~~~~~l~~~g~~~~----~~--~d~~~~~-~~~~~~~~~Dv~I~iS~sg~~ 188 (278)
T PRK11557 116 EKLHECVTMLRSARRIILTGIGASGLVAQNFAWKLMKIGINAV----AE--RDMHALL-ATVQALSPDDLLLAISYSGER 188 (278)
T ss_pred HHHHHHHHHHhcCCeEEEEecChhHHHHHHHHHHHhhCCCeEE----Ec--CChHHHH-HHHHhCCCCCEEEEEcCCCCC
Confidence 4456788888888877777888888888888888765442211 00 0000000 000011 12444555455544
Q ss_pred H--HHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEec
Q 001949 674 K--RMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMG 711 (992)
Q Consensus 674 K--~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g 711 (992)
+ .++++..+++|..|+++-|. .+.++-+.||+-+...
T Consensus 189 ~~~~~~~~~ak~~ga~iI~IT~~-~~s~la~~ad~~l~~~ 227 (278)
T PRK11557 189 RELNLAADEALRVGAKVLAITGF-TPNALQQRASHCLYTI 227 (278)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCC-CCCchHHhCCEEEEeC
Confidence 4 57788888899888888875 3566667788877543
No 274
>cd00859 HisRS_anticodon HisRS Histidyl-anticodon binding domain. HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=22.41 E-value=1.9e+02 Score=24.09 Aligned_cols=47 Identities=17% Similarity=0.119 Sum_probs=36.4
Q ss_pred EecccCCCcHHHHHHHHHHHhCCcEEEEE-cCCCHHHHHHHHHHhCCC
Q 001949 586 LVGMLDPPREEVKNAMLSCMTAGIRVIVV-TGDNKSTAESICHKIGAF 632 (992)
Q Consensus 586 ~i~~~d~~~~~~~~~i~~l~~~gi~v~~~-TGd~~~~a~~ia~~~gi~ 632 (992)
++.+.+..++.+.+..+.|+++|+++.+. .+++.......|++.|+.
T Consensus 6 i~~~~~~~~~~a~~i~~~Lr~~g~~v~~~~~~~~~~~~~~~a~~~~~~ 53 (91)
T cd00859 6 VVPLGEGALSEALELAEQLRDAGIKAEIDYGGRKLKKQFKYADRSGAR 53 (91)
T ss_pred EEEcChHHHHHHHHHHHHHHHCCCEEEEecCCCCHHHHHHHHHHcCCC
Confidence 34455667788889999999999998874 445777778888888864
No 275
>PRK05886 yajC preprotein translocase subunit YajC; Validated
Probab=22.20 E-value=2.5e+02 Score=25.41 Aligned_cols=24 Identities=21% Similarity=0.148 Sum_probs=9.1
Q ss_pred HHHHHHHHH-HhcCCCceEEEECCE
Q 001949 110 NAEKALEEL-RAYQADIATVLRNGC 133 (992)
Q Consensus 110 k~~~~~~~l-~~~~~~~~~V~R~g~ 133 (992)
|.++..+++ .++.+..-.+..+|-
T Consensus 27 Kr~K~~~~m~~~Lk~GD~VvT~gGi 51 (109)
T PRK05886 27 KAMQATIDLHESLQPGDRVHTTSGL 51 (109)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCe
Confidence 333334444 333333323334443
No 276
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=21.69 E-value=2.1e+02 Score=30.96 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=29.4
Q ss_pred cHHHHHHHHHHHhCCcEEEEEcCCCHHHHHH-HHHHhCCC
Q 001949 594 REEVKNAMLSCMTAGIRVIVVTGDNKSTAES-ICHKIGAF 632 (992)
Q Consensus 594 ~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~-ia~~~gi~ 632 (992)
.+++...-+.|+..|.+++++|.+....+.. ..+.++..
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~~ 101 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGLQ 101 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhhC
Confidence 5677888889999999999999887665544 44555553
No 277
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=21.49 E-value=82 Score=29.02 Aligned_cols=31 Identities=26% Similarity=0.354 Sum_probs=26.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHHHH
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKSTA 622 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a 622 (992)
--.+++.++++.+|++|++++.+|+......
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 58 GETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 3567899999999999999999999866543
No 278
>TIGR03127 RuMP_HxlB 6-phospho 3-hexuloisomerase. Members of this protein family are 6-phospho 3-hexuloisomerase (PHI), or the PHI domain of a fusion protein. This enzyme is part of the ribulose monophosphate (RuMP) pathway, which in one direction removes the toxic metabolite formaldehyde by assimilation into fructose-6-phosphate. In the other direction, in species lacking a complete pentose phosphate pathway, the RuMP pathway yields ribulose-5-phosphate, necessary for nucleotide biosynthesis, at the cost of also yielding formaldehyde. These latter species tend usually have a formaldehyde-activating enzyme to attach formaldehyde to the C1 carrier tetrahydromethanopterin.
Probab=21.43 E-value=6.9e+02 Score=24.49 Aligned_cols=106 Identities=9% Similarity=0.059 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCCccccccccccchhhhcCCHHHHHHHhcceeEEeecChhhH
Q 001949 595 EEVKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDHLVDFVGRSYTASEFEELPAMQQTVALQHMALFTRVEPSHK 674 (992)
Q Consensus 595 ~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K 674 (992)
+...++++.+.+++.-.++-.|.+...|..++.++.-...... .........+. -.++.++...++..+
T Consensus 18 ~~~~~~~~~l~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~----~~~~~~~~~~~-------~~Dv~I~iS~sG~t~ 86 (179)
T TIGR03127 18 EELDKLADKIIKAKRIFVAGAGRSGLVGKAFAMRLMHLGFNVY----VVGETTTPSIK-------KGDLLIAISGSGETE 86 (179)
T ss_pred HHHHHHHHHHHhCCEEEEEecCHHHHHHHHHHHHHHhCCCeEE----EeCCcccCCCC-------CCCEEEEEeCCCCcH
Confidence 4466778888888865666678888888888887743332111 11110000110 123445554555443
Q ss_pred --HHHHHHHhhcCCEEEEEcCCcCCHHHHhhCCeeEEecC
Q 001949 675 --RMLVEALQNQNEVVAMTGDGVNDAPALKKADIGIAMGS 712 (992)
Q Consensus 675 --~~iv~~l~~~~~~v~~iGDg~ND~~~l~~A~vgIa~g~ 712 (992)
.++++..+++|..|+.+-+. .+.|+-+.||+-+.+..
T Consensus 87 ~~i~~~~~ak~~g~~ii~IT~~-~~s~la~~ad~~l~~~~ 125 (179)
T TIGR03127 87 SLVTVAKKAKEIGATVAAITTN-PESTLGKLADVVVEIPA 125 (179)
T ss_pred HHHHHHHHHHHCCCeEEEEECC-CCCchHHhCCEEEEeCC
Confidence 57788888888877777654 34777788999888753
No 279
>PF06196 DUF997: Protein of unknown function (DUF997); InterPro: IPR010398 This is a family of predicted bacterial membrane protein with unknown function.
Probab=21.41 E-value=4.2e+02 Score=22.44 Aligned_cols=30 Identities=17% Similarity=0.138 Sum_probs=19.0
Q ss_pred cccCChhhHHHHHHHHHH-HHHHHHHHHHHH
Q 001949 937 VTPLSWADWTAVFYLSFP-VIIIDEVLKFFS 966 (992)
Q Consensus 937 ~~~l~~~~w~~~~~~~~~-~l~~~ei~K~~~ 966 (992)
...+|.++|..|++..++ .++.-.++|++-
T Consensus 39 i~GlPlWF~~SCi~~~il~~~l~~~~vk~~F 69 (80)
T PF06196_consen 39 IFGLPLWFFYSCIGGPILFIILVWLMVKFFF 69 (80)
T ss_pred ccCCcHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 446788888888766555 344455566553
No 280
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=21.23 E-value=1.1e+02 Score=29.73 Aligned_cols=45 Identities=20% Similarity=0.286 Sum_probs=33.9
Q ss_pred CcEEEEEecccCCCcHHHHHHHHHHHhCCcEEEEEcCCCHHHHHHHH
Q 001949 580 DLTFIGLVGMLDPPREEVKNAMLSCMTAGIRVIVVTGDNKSTAESIC 626 (992)
Q Consensus 580 ~l~~lG~i~~~d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia 626 (992)
+-.++|+-.-- -.+.+.++++..++.|++++-+||++--.-..++
T Consensus 110 GDvLigISTSG--NS~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 110 GDVLIGISTSG--NSKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CCEEEEEeCCC--CCHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 33555555444 4578999999999999999999999876554444
No 281
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=21.20 E-value=1.5e+02 Score=22.87 Aligned_cols=36 Identities=22% Similarity=0.227 Sum_probs=27.9
Q ss_pred CCceEEE-ECCEEEEeeCC-CCCCCcEEEecCCCccCC
Q 001949 123 ADIATVL-RNGCFSILPAA-ELVPGDIVEVNVGCKIPA 158 (992)
Q Consensus 123 ~~~~~V~-R~g~~~~i~~~-~Lv~GDII~l~~G~~iPa 158 (992)
...+.|+ .||++.+|+.. +..+||.|.+.+.+..+.
T Consensus 5 ~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~~~~ 42 (56)
T PF12791_consen 5 KKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDIINK 42 (56)
T ss_pred CCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhhccc
Confidence 3456666 68999888765 699999999998887664
No 282
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=21.12 E-value=1e+02 Score=28.30 Aligned_cols=30 Identities=13% Similarity=0.132 Sum_probs=25.2
Q ss_pred CCCcHHHHHHHHHHHhCCcEEEEEcCCCHH
Q 001949 591 DPPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (992)
Q Consensus 591 d~~~~~~~~~i~~l~~~gi~v~~~TGd~~~ 620 (992)
..-.+++.++++.+++.|.+++.+|+....
T Consensus 56 sG~t~e~~~~~~~a~~~g~~vi~iT~~~~s 85 (126)
T cd05008 56 SGETADTLAALRLAKEKGAKTVAITNVVGS 85 (126)
T ss_pred CcCCHHHHHHHHHHHHcCCeEEEEECCCCC
Confidence 334567999999999999999999998654
No 283
>PF06923 GutM: Glucitol operon activator protein (GutM); InterPro: IPR009693 This family consists of several glucitol operon activator (GutM) proteins. Expression of the glucitol (gut) operon in Escherichia coli is regulated by an unusual, complex system, which consists of an activator (encoded by the gutM gene) and a repressor (encoded by the gutR gene) in addition to the cAMP-CRP complex (CRP, cAMP receptor protein). Synthesis of the mRNA, which initiates at the promoter specific to the gutR gene, occurs within the gutM gene. Expressional control of the gut operon appears to occur as a consequence of the antagonistic action of the products of the autogenously regulated gutM and gutR genes [].
Probab=21.10 E-value=5.8e+02 Score=23.02 Aligned_cols=55 Identities=24% Similarity=0.266 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEEECCEEEEeeCCCCCCCcEEEecCCC
Q 001949 91 SVILLILAANAAVGVITETNAEKALEELRAYQADIATVLRNGCFSILPAAELVPGDIVEVNVGC 154 (992)
Q Consensus 91 ~~ii~~i~~~~~~~~~~~~k~~~~~~~l~~~~~~~~~V~R~g~~~~i~~~~Lv~GDII~l~~G~ 154 (992)
++++++.++..+++++|-++-.+.++++++.- .+-+=|. ..-..+|-||.+.-++
T Consensus 6 i~~~~~~~lQ~~l~~~Qik~f~~~~~~l~~~G--~V~iG~~-------~g~f~~g~Ivlla~D~ 60 (109)
T PF06923_consen 6 ILLVIAWLLQILLGWFQIKNFNKAYKELRKKG--RVGIGRS-------KGRFRPGVIVLLAVDE 60 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--cEEEeee-------cCcccCCeEEEEEECC
Confidence 34455566777888999999999999988432 3333322 2345789988887553
No 284
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=20.54 E-value=5.6e+02 Score=27.13 Aligned_cols=42 Identities=21% Similarity=0.287 Sum_probs=28.7
Q ss_pred cccCCCcHHHHHHHHHHHhCCcEEE-EEcCCC-HHHHHHHHHHh
Q 001949 588 GMLDPPREEVKNAMLSCMTAGIRVI-VVTGDN-KSTAESICHKI 629 (992)
Q Consensus 588 ~~~d~~~~~~~~~i~~l~~~gi~v~-~~TGd~-~~~a~~ia~~~ 629 (992)
.+.|.+-++..+.++.+++.|++.+ +++-.. .+....+++..
T Consensus 120 iipDlp~ee~~~~~~~~~~~gl~~i~lv~P~T~~eri~~i~~~~ 163 (256)
T TIGR00262 120 LVADLPLEESGDLVEAAKKHGVKPIFLVAPNADDERLKQIAEKS 163 (256)
T ss_pred EECCCChHHHHHHHHHHHHCCCcEEEEECCCCCHHHHHHHHHhC
Confidence 3446666788888899999998844 666655 34555666654
No 285
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=20.46 E-value=69 Score=32.20 Aligned_cols=29 Identities=17% Similarity=0.335 Sum_probs=23.2
Q ss_pred CCcHHHHHHHHHHHhCCcEEEEEcCCCHH
Q 001949 592 PPREEVKNAMLSCMTAGIRVIVVTGDNKS 620 (992)
Q Consensus 592 ~~~~~~~~~i~~l~~~gi~v~~~TGd~~~ 620 (992)
++-|++.+++++|++.|..++++|++...
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 56689999999999999999988888754
No 286
>PF09926 DUF2158: Uncharacterized small protein (DUF2158); InterPro: IPR019226 This entry represents a family of predominantly prokaryotic proteins with no known function.
Probab=20.33 E-value=65 Score=24.80 Aligned_cols=12 Identities=33% Similarity=0.595 Sum_probs=10.0
Q ss_pred CCCcEEEecCCC
Q 001949 143 VPGDIVEVNVGC 154 (992)
Q Consensus 143 v~GDII~l~~G~ 154 (992)
.+||+|.|+.|-
T Consensus 2 ~~GDvV~LKSGG 13 (53)
T PF09926_consen 2 KIGDVVQLKSGG 13 (53)
T ss_pred CCCCEEEEccCC
Confidence 589999999873
No 287
>TIGR00696 wecB_tagA_cpsF bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family. The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.
Probab=20.18 E-value=4.1e+02 Score=26.40 Aligned_cols=37 Identities=5% Similarity=0.020 Sum_probs=26.8
Q ss_pred HHHHHHHHHhCCcEEEEEcCCCHHHHHHHHHHhCCCCC
Q 001949 597 VKNAMLSCMTAGIRVIVVTGDNKSTAESICHKIGAFDH 634 (992)
Q Consensus 597 ~~~~i~~l~~~gi~v~~~TGd~~~~a~~ia~~~gi~~~ 634 (992)
..+.++.+.+.|.++.++ |.++..+...++.+.-..+
T Consensus 37 ~~~l~~~~~~~~~~vfll-G~~~~v~~~~~~~l~~~yP 73 (177)
T TIGR00696 37 MEELCQRAGKEKLPIFLY-GGKPDVLQQLKVKLIKEYP 73 (177)
T ss_pred HHHHHHHHHHcCCeEEEE-CCCHHHHHHHHHHHHHHCC
Confidence 346677788889999999 7777777777777654433
No 288
>smart00306 HintN Hint (Hedgehog/Intein) domain N-terminal region. Hedgehog/Intein domain, N-terminal region. Domain has been split to accommodate large insertions of endonucleases.
Probab=20.05 E-value=1e+02 Score=26.78 Aligned_cols=26 Identities=38% Similarity=0.392 Sum_probs=20.3
Q ss_pred eEEEECCEEEEeeCCCCCCCcEEEec
Q 001949 126 ATVLRNGCFSILPAAELVPGDIVEVN 151 (992)
Q Consensus 126 ~~V~R~g~~~~i~~~~Lv~GDII~l~ 151 (992)
..+.++|+.+.+.+++|++||.|.+.
T Consensus 74 ~~~~~~~~~~w~~a~~l~~gd~v~~~ 99 (100)
T smart00306 74 LLVRDGGKLVWVFASELKPGDYVLVP 99 (100)
T ss_pred EEEecCCcEEEEEHHHCCCCCEEEec
Confidence 45556666778999999999998764
No 289
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.02 E-value=7.4e+02 Score=26.63 Aligned_cols=141 Identities=15% Similarity=0.243 Sum_probs=71.4
Q ss_pred EEEecccCCCcHH--HHHHHHHHHhCCcEEEEE--cCC-CHHHHHHHHHHhCCCCCcccccccccc--------------
Q 001949 584 IGLVGMLDPPREE--VKNAMLSCMTAGIRVIVV--TGD-NKSTAESICHKIGAFDHLVDFVGRSYT-------------- 644 (992)
Q Consensus 584 lG~i~~~d~~~~~--~~~~i~~l~~~gi~v~~~--TGd-~~~~a~~ia~~~gi~~~~~~~~~~~~~-------------- 644 (992)
++.+..-|.+... ++...+.+++.|+.+.+. ..+ ..+.....-++++-+. .++|..+.
T Consensus 29 Laii~vg~d~as~~Yv~~k~k~~~~~Gi~~~~~~l~~~~~~~el~~~I~~lN~D~---~V~GIlvqlPLp~~i~~~~v~~ 105 (279)
T PRK14178 29 LATVIVGDDPASQMYVRMKHRACERVGIGSVGIELPGDATTRTVLERIRRLNEDP---DINGILVQLPLPKGVDTERVIA 105 (279)
T ss_pred EEEEEeCCChhHHHHHHHHHHHHHHcCCEEEEEECCCCCCHHHHHHHHHHHhCCC---CCCeEEEcCCCCCCCCHHHHHh
Confidence 3444444444333 345578888889986554 444 2333444555554332 22222221
Q ss_pred ----chhhhcCCHHHHHHHhcceeEEeecChhhHHHHHHHHhh--cCCEEEEEcCCc-CCHH---HHhhCCeeEEe--cC
Q 001949 645 ----ASEFEELPAMQQTVALQHMALFTRVEPSHKRMLVEALQN--QNEVVAMTGDGV-NDAP---ALKKADIGIAM--GS 712 (992)
Q Consensus 645 ----~~~~~~~~~~~~~~~~~~~~v~~r~~p~~K~~iv~~l~~--~~~~v~~iGDg~-ND~~---~l~~A~vgIa~--g~ 712 (992)
..+.+.++......+...-.-|.-+||..=.++++...- .|+.|..+|-|. -=-| +++..+-.+.. ..
T Consensus 106 ~I~p~KDVDGl~~~n~g~l~~~~~~~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~ 185 (279)
T PRK14178 106 AILPEKDVDGFHPLNLGRLVSGLPGFAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSK 185 (279)
T ss_pred ccCcccCcccCChhhHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecC
Confidence 112222222222222222223556788766666666543 389999999983 3344 55554444443 32
Q ss_pred Cc--HHHHhccCeeecC
Q 001949 713 GT--AVAKSASDMVLAD 727 (992)
Q Consensus 713 ~~--~~~~~~ad~vl~~ 727 (992)
.. ......||+++..
T Consensus 186 t~~L~~~~~~ADIvI~A 202 (279)
T PRK14178 186 TENLKAELRQADILVSA 202 (279)
T ss_pred hhHHHHHHhhCCEEEEC
Confidence 22 2234568888864
Done!